Query 015331
Match_columns 409
No_of_seqs 227 out of 2228
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 10:44:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015331hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 7.7E-49 2.6E-53 374.7 33.1 370 3-399 22-397 (407)
2 4hb9_A Similarities with proba 100.0 2.5E-43 8.6E-48 337.1 31.9 347 5-373 2-381 (412)
3 2qa1_A PGAE, polyketide oxygen 100.0 1.5E-41 5.1E-46 330.9 35.2 347 1-388 8-364 (500)
4 2qa2_A CABE, polyketide oxygen 100.0 2.1E-41 7E-46 329.8 34.0 346 3-389 11-366 (499)
5 2xdo_A TETX2 protein; tetracyc 100.0 7.5E-41 2.6E-45 318.4 33.3 341 3-373 25-382 (398)
6 2x3n_A Probable FAD-dependent 100.0 6.1E-42 2.1E-46 326.2 25.7 354 4-390 6-376 (399)
7 2vou_A 2,6-dihydroxypyridine h 100.0 8.4E-41 2.9E-45 317.9 30.5 334 1-374 1-366 (397)
8 3fmw_A Oxygenase; mithramycin, 100.0 4.3E-41 1.5E-45 331.7 27.5 350 4-390 49-412 (570)
9 3c96_A Flavin-containing monoo 100.0 1.2E-40 4.2E-45 318.1 28.9 339 1-370 1-366 (410)
10 3ihg_A RDME; flavoenzyme, anth 100.0 5E-40 1.7E-44 324.2 29.4 344 1-373 1-370 (535)
11 3alj_A 2-methyl-3-hydroxypyrid 100.0 8.5E-41 2.9E-45 316.0 19.9 324 4-369 11-343 (379)
12 2r0c_A REBC; flavin adenine di 100.0 1.8E-39 6.3E-44 320.2 29.1 352 4-391 26-409 (549)
13 1pn0_A Phenol 2-monooxygenase; 100.0 8.1E-40 2.8E-44 328.3 26.7 342 4-374 8-421 (665)
14 1k0i_A P-hydroxybenzoate hydro 100.0 1.7E-39 5.9E-44 308.8 25.6 354 4-392 2-373 (394)
15 2dkh_A 3-hydroxybenzoate hydro 100.0 7.1E-39 2.4E-43 321.1 27.7 343 3-374 31-412 (639)
16 3oz2_A Digeranylgeranylglycero 100.0 8.9E-37 3.1E-41 290.1 29.0 324 3-364 3-338 (397)
17 3e1t_A Halogenase; flavoprotei 100.0 1.5E-36 5.2E-41 297.4 29.9 345 4-370 7-363 (512)
18 3i3l_A Alkylhalidase CMLS; fla 100.0 1.2E-35 4.1E-40 293.4 29.9 346 1-371 20-376 (591)
19 3cgv_A Geranylgeranyl reductas 100.0 5E-35 1.7E-39 278.3 30.3 333 3-372 3-346 (397)
20 3nix_A Flavoprotein/dehydrogen 100.0 4.5E-35 1.5E-39 280.8 28.2 313 1-327 1-328 (421)
21 3atr_A Conserved archaeal prot 100.0 1.1E-35 3.8E-40 287.2 21.9 326 2-372 4-351 (453)
22 3c4a_A Probable tryptophan hyd 100.0 8.3E-36 2.8E-40 281.9 10.5 331 5-389 1-353 (381)
23 2pyx_A Tryptophan halogenase; 100.0 6.5E-31 2.2E-35 258.3 30.3 327 3-369 6-408 (526)
24 2gmh_A Electron transfer flavo 100.0 1.2E-30 4E-35 258.5 30.4 340 4-374 35-423 (584)
25 2weu_A Tryptophan 5-halogenase 100.0 3.6E-30 1.2E-34 252.6 28.2 322 4-369 2-400 (511)
26 2aqj_A Tryptophan halogenase, 100.0 7.1E-30 2.4E-34 251.7 27.6 323 1-368 2-391 (538)
27 2e4g_A Tryptophan halogenase; 100.0 7.7E-30 2.6E-34 251.7 27.4 324 3-370 24-424 (550)
28 3ihm_A Styrene monooxygenase A 100.0 4.3E-28 1.5E-32 232.3 23.5 350 4-396 22-403 (430)
29 2bry_A NEDD9 interacting prote 99.9 4.3E-24 1.5E-28 207.7 14.6 139 3-171 91-239 (497)
30 1yvv_A Amine oxidase, flavin-c 99.9 4.7E-20 1.6E-24 170.8 24.4 297 4-327 2-329 (336)
31 1y56_B Sarcosine oxidase; dehy 99.7 3.1E-15 1.1E-19 140.9 22.0 67 104-171 145-215 (382)
32 1ryi_A Glycine oxidase; flavop 99.7 2.9E-16 9.9E-21 148.0 14.5 194 104-323 160-361 (382)
33 3ps9_A TRNA 5-methylaminomethy 99.7 3.6E-15 1.2E-19 150.6 21.8 158 4-163 272-474 (676)
34 3dje_A Fructosyl amine: oxygen 99.7 3E-15 1E-19 143.7 20.0 60 104-163 157-222 (438)
35 3nyc_A D-arginine dehydrogenas 99.7 1.1E-15 3.8E-20 143.8 14.6 67 104-171 150-219 (381)
36 2oln_A NIKD protein; flavoprot 99.6 1.1E-14 3.9E-19 137.8 21.1 172 1-173 1-220 (397)
37 2gag_B Heterotetrameric sarcos 99.6 3.8E-15 1.3E-19 141.4 17.5 197 104-323 170-374 (405)
38 3dme_A Conserved exported prot 99.6 2.7E-15 9.1E-20 140.5 15.6 68 104-171 146-220 (369)
39 3pvc_A TRNA 5-methylaminomethy 99.6 3.9E-15 1.3E-19 150.6 17.2 60 104-163 408-470 (689)
40 2gf3_A MSOX, monomeric sarcosi 99.6 3.7E-15 1.3E-19 140.7 15.5 165 4-169 3-213 (389)
41 3kkj_A Amine oxidase, flavin-c 99.6 1.1E-15 3.6E-20 137.6 10.2 37 4-40 2-38 (336)
42 3i6d_A Protoporphyrinogen oxid 99.6 3E-14 1E-18 138.0 18.5 55 109-163 236-290 (470)
43 2qcu_A Aerobic glycerol-3-phos 99.6 9.3E-14 3.2E-18 135.3 20.7 210 104-325 145-373 (501)
44 3v76_A Flavoprotein; structura 99.6 2.6E-14 9E-19 135.3 14.9 151 2-171 25-207 (417)
45 2uzz_A N-methyl-L-tryptophan o 99.5 1.7E-13 6E-18 128.4 17.9 59 104-163 145-205 (372)
46 3da1_A Glycerol-3-phosphate de 99.5 8.1E-14 2.8E-18 137.3 14.8 68 104-171 166-242 (561)
47 3axb_A Putative oxidoreductase 99.5 1.8E-13 6E-18 131.7 16.9 69 104-173 177-266 (448)
48 3qj4_A Renalase; FAD/NAD(P)-bi 99.5 2.4E-13 8.3E-18 125.9 16.3 143 5-161 2-164 (342)
49 4dgk_A Phytoene dehydrogenase; 99.5 1.2E-12 4.1E-17 127.7 20.7 60 110-169 223-285 (501)
50 3c4n_A Uncharacterized protein 99.5 1.8E-12 6E-17 123.0 18.9 69 104-173 168-249 (405)
51 3lov_A Protoporphyrinogen oxid 99.5 1.4E-11 4.9E-16 119.2 23.9 54 109-163 237-290 (475)
52 2i0z_A NAD(FAD)-utilizing dehy 99.5 1.3E-12 4.6E-17 125.3 16.2 154 4-172 26-212 (447)
53 2gqf_A Hypothetical protein HI 99.5 6.3E-13 2.2E-17 125.4 13.7 149 1-171 1-188 (401)
54 4a9w_A Monooxygenase; baeyer-v 99.4 3.7E-13 1.3E-17 125.2 11.7 129 3-163 2-133 (357)
55 2ywl_A Thioredoxin reductase r 99.4 1.4E-12 4.8E-17 109.1 13.6 116 5-171 2-119 (180)
56 3ka7_A Oxidoreductase; structu 99.4 4E-12 1.4E-16 121.3 18.6 58 109-168 197-257 (425)
57 1rp0_A ARA6, thiazole biosynth 99.4 2E-12 6.9E-17 116.4 14.0 132 4-167 39-196 (284)
58 3nlc_A Uncharacterized protein 99.4 1.5E-12 5.1E-17 126.8 14.0 161 4-171 107-290 (549)
59 2zbw_A Thioredoxin reductase; 99.4 6.3E-13 2.2E-17 122.7 10.8 124 1-168 2-127 (335)
60 3nrn_A Uncharacterized protein 99.4 2E-12 6.8E-17 123.3 14.0 58 109-169 190-249 (421)
61 1pj5_A N,N-dimethylglycine oxi 99.4 1.7E-11 5.9E-16 126.5 21.2 169 1-173 1-219 (830)
62 3ab1_A Ferredoxin--NADP reduct 99.4 5.8E-13 2E-17 124.3 9.1 122 1-166 11-135 (360)
63 3jsk_A Cypbp37 protein; octame 99.4 2.2E-12 7.5E-17 117.3 12.3 132 4-167 79-256 (344)
64 2cul_A Glucose-inhibited divis 99.4 1.7E-12 5.8E-17 113.2 10.9 128 3-170 2-133 (232)
65 2ivd_A PPO, PPOX, protoporphyr 99.4 7.7E-11 2.6E-15 114.2 23.7 54 109-163 239-295 (478)
66 2gv8_A Monooxygenase; FMO, FAD 99.4 2.5E-12 8.5E-17 123.6 12.0 155 2-163 4-178 (447)
67 3ces_A MNMG, tRNA uridine 5-ca 99.4 1.4E-12 4.7E-17 128.0 10.2 149 3-166 27-185 (651)
68 3cp8_A TRNA uridine 5-carboxym 99.4 3.5E-12 1.2E-16 125.1 12.9 147 3-164 20-176 (641)
69 1c0p_A D-amino acid oxidase; a 99.4 3E-12 1E-16 119.5 11.9 38 1-38 3-40 (363)
70 3k7m_X 6-hydroxy-L-nicotine ox 99.4 7.2E-12 2.4E-16 119.8 14.7 50 110-161 209-258 (431)
71 1s3e_A Amine oxidase [flavin-c 99.4 9.3E-11 3.2E-15 114.9 22.7 53 109-162 216-268 (520)
72 2zxi_A TRNA uridine 5-carboxym 99.3 5.2E-12 1.8E-16 123.5 11.8 148 3-165 26-183 (637)
73 1qo8_A Flavocytochrome C3 fuma 99.3 6.5E-12 2.2E-16 124.1 12.4 162 3-168 120-318 (566)
74 3fbs_A Oxidoreductase; structu 99.3 2.1E-11 7.1E-16 110.3 13.6 110 4-164 2-114 (297)
75 2rgh_A Alpha-glycerophosphate 99.3 8.9E-11 3.1E-15 115.8 18.3 66 105-170 185-259 (571)
76 1y0p_A Fumarate reductase flav 99.3 2.1E-11 7.1E-16 120.7 13.6 158 4-165 126-320 (571)
77 2q0l_A TRXR, thioredoxin reduc 99.3 2.8E-11 9.6E-16 110.3 12.9 112 5-164 2-116 (311)
78 2gjc_A Thiazole biosynthetic e 99.3 3E-11 1E-15 109.2 12.4 133 4-168 65-245 (326)
79 3nks_A Protoporphyrinogen oxid 99.3 1.5E-10 5E-15 112.2 17.6 53 110-163 236-291 (477)
80 3cty_A Thioredoxin reductase; 99.3 3.3E-11 1.1E-15 110.3 12.1 113 1-163 13-127 (319)
81 3f8d_A Thioredoxin reductase ( 99.3 2.3E-11 7.9E-16 111.4 11.1 110 4-163 15-126 (323)
82 1sez_A Protoporphyrinogen oxid 99.3 4E-10 1.4E-14 109.9 20.4 64 1-64 10-88 (504)
83 4fk1_A Putative thioredoxin re 99.3 5E-11 1.7E-15 108.4 13.0 111 2-162 4-117 (304)
84 3gwf_A Cyclohexanone monooxyge 99.3 2.6E-11 9E-16 118.6 11.8 133 4-163 8-148 (540)
85 2vvm_A Monoamine oxidase N; FA 99.2 1.6E-10 5.6E-15 112.4 17.3 54 109-162 256-312 (495)
86 1vdc_A NTR, NADPH dependent th 99.2 9.9E-12 3.4E-16 114.5 8.2 117 4-164 8-126 (333)
87 2q7v_A Thioredoxin reductase; 99.2 3.4E-11 1.2E-15 110.5 11.6 113 3-163 7-124 (325)
88 3itj_A Thioredoxin reductase 1 99.2 1.6E-11 5.5E-16 113.2 8.8 118 3-163 21-143 (338)
89 1w4x_A Phenylacetone monooxyge 99.2 2E-11 7E-16 119.9 10.0 133 4-163 16-155 (542)
90 4ap3_A Steroid monooxygenase; 99.2 3.7E-11 1.3E-15 117.8 11.6 132 4-162 21-159 (549)
91 1trb_A Thioredoxin reductase; 99.2 4.4E-11 1.5E-15 109.5 10.6 114 1-163 2-117 (320)
92 2a87_A TRXR, TR, thioredoxin r 99.2 5.5E-11 1.9E-15 109.6 11.0 113 2-163 12-127 (335)
93 3lzw_A Ferredoxin--NADP reduct 99.2 4.1E-11 1.4E-15 110.1 9.7 114 4-162 7-123 (332)
94 3g3e_A D-amino-acid oxidase; F 99.2 7E-11 2.4E-15 109.7 11.3 34 5-38 1-40 (351)
95 3uox_A Otemo; baeyer-villiger 99.2 4E-11 1.4E-15 117.5 9.7 133 4-163 9-148 (545)
96 4a5l_A Thioredoxin reductase; 99.2 6.4E-11 2.2E-15 108.1 10.4 119 1-162 1-121 (314)
97 2xve_A Flavin-containing monoo 99.2 9E-11 3.1E-15 113.0 11.8 147 5-163 3-167 (464)
98 3d1c_A Flavin-containing putat 99.2 9.3E-11 3.2E-15 109.6 11.5 135 4-162 4-143 (369)
99 4gut_A Lysine-specific histone 99.2 3E-10 1E-14 115.2 14.8 50 109-161 535-584 (776)
100 4at0_A 3-ketosteroid-delta4-5a 99.1 3.2E-10 1.1E-14 110.5 13.3 38 3-40 40-77 (510)
101 1fl2_A Alkyl hydroperoxide red 99.1 1.3E-10 4.6E-15 105.7 9.8 111 4-163 1-116 (310)
102 3s5w_A L-ornithine 5-monooxyge 99.1 4.4E-10 1.5E-14 108.4 13.2 146 4-163 30-193 (463)
103 1kf6_A Fumarate reductase flav 99.1 2.1E-09 7E-14 106.6 14.9 162 3-168 4-203 (602)
104 1d4d_A Flavocytochrome C fumar 99.0 6E-10 2.1E-14 110.0 10.7 37 4-40 126-162 (572)
105 4gcm_A TRXR, thioredoxin reduc 99.0 3.7E-10 1.3E-14 103.0 8.1 37 1-37 2-39 (312)
106 1hyu_A AHPF, alkyl hydroperoxi 99.0 1E-09 3.5E-14 107.2 11.7 112 3-163 211-327 (521)
107 1rsg_A FMS1 protein; FAD bindi 99.0 1.4E-09 4.7E-14 106.4 12.0 56 107-162 201-257 (516)
108 3r9u_A Thioredoxin reductase; 99.0 3.2E-09 1.1E-13 96.6 13.5 111 3-162 3-118 (315)
109 1chu_A Protein (L-aspartate ox 99.0 6.8E-10 2.3E-14 108.7 9.4 35 4-39 8-42 (540)
110 2jae_A L-amino acid oxidase; o 99.0 3.2E-09 1.1E-13 103.0 14.0 54 108-161 239-295 (489)
111 1ojt_A Surface protein; redox- 99.0 2.6E-10 8.8E-15 110.5 6.1 39 1-39 3-41 (482)
112 1v59_A Dihydrolipoamide dehydr 99.0 4.5E-10 1.5E-14 108.8 7.8 146 1-162 2-157 (478)
113 1q1r_A Putidaredoxin reductase 99.0 1.4E-09 4.9E-14 103.6 11.0 114 1-164 1-116 (431)
114 1dxl_A Dihydrolipoamide dehydr 99.0 1.2E-09 4.2E-14 105.5 9.7 144 2-169 4-158 (470)
115 2yg5_A Putrescine oxidase; oxi 99.0 8E-09 2.8E-13 99.2 14.7 51 109-161 216-267 (453)
116 3o0h_A Glutathione reductase; 99.0 3.1E-09 1.1E-13 102.9 11.9 45 120-164 246-290 (484)
117 2e5v_A L-aspartate oxidase; ar 99.0 3.5E-09 1.2E-13 102.0 12.1 58 108-166 119-180 (472)
118 2bs2_A Quinol-fumarate reducta 98.9 8.5E-09 2.9E-13 102.9 14.5 37 3-39 4-40 (660)
119 3l8k_A Dihydrolipoyl dehydroge 98.9 2.9E-09 9.8E-14 102.7 10.3 40 1-40 1-40 (466)
120 2h88_A Succinate dehydrogenase 98.9 6.7E-09 2.3E-13 102.9 12.7 57 108-164 155-219 (621)
121 4gde_A UDP-galactopyranose mut 98.9 3.1E-09 1.1E-13 103.8 10.1 58 108-168 222-281 (513)
122 2a8x_A Dihydrolipoyl dehydroge 98.9 4.1E-10 1.4E-14 108.6 3.7 144 1-164 1-148 (464)
123 2b9w_A Putative aminooxidase; 98.9 2.5E-08 8.4E-13 94.9 16.0 53 109-163 207-259 (424)
124 2wdq_A Succinate dehydrogenase 98.9 2.4E-08 8.2E-13 98.7 16.1 36 4-39 7-42 (588)
125 3sx6_A Sulfide-quinone reducta 98.9 1.4E-09 4.8E-14 104.0 5.2 111 1-164 1-114 (437)
126 3iwa_A FAD-dependent pyridine 98.8 6.9E-09 2.4E-13 100.2 9.7 120 1-162 1-125 (472)
127 3p1w_A Rabgdi protein; GDI RAB 98.8 1.7E-08 5.9E-13 96.2 11.7 39 1-39 17-55 (475)
128 3oc4_A Oxidoreductase, pyridin 98.8 8.7E-09 3E-13 98.9 9.7 110 5-162 3-115 (452)
129 3kd9_A Coenzyme A disulfide re 98.8 1.3E-08 4.3E-13 97.7 10.6 111 1-162 1-114 (449)
130 3lxd_A FAD-dependent pyridine 98.8 1.4E-08 4.9E-13 96.3 10.7 110 3-162 8-119 (415)
131 3urh_A Dihydrolipoyl dehydroge 98.8 5.4E-09 1.8E-13 101.5 7.8 37 3-39 24-60 (491)
132 1b37_A Protein (polyamine oxid 98.8 6.6E-08 2.3E-12 93.3 14.8 54 109-162 207-270 (472)
133 2qae_A Lipoamide, dihydrolipoy 98.8 8.2E-09 2.8E-13 99.6 8.0 36 4-39 2-37 (468)
134 3cgb_A Pyridine nucleotide-dis 98.8 1.7E-08 5.9E-13 97.6 10.3 112 5-163 37-153 (480)
135 2bc0_A NADH oxidase; flavoprot 98.8 1.7E-08 5.8E-13 97.9 10.0 112 4-163 35-150 (490)
136 1zmd_A Dihydrolipoyl dehydroge 98.8 8.4E-09 2.9E-13 99.7 7.6 37 3-39 5-41 (474)
137 1ebd_A E3BD, dihydrolipoamide 98.8 8.1E-09 2.8E-13 99.2 7.4 34 3-36 2-35 (455)
138 3ics_A Coenzyme A-disulfide re 98.8 2.7E-08 9.1E-13 98.8 11.2 112 4-162 36-152 (588)
139 3klj_A NAD(FAD)-dependent dehy 98.8 2.9E-08 9.8E-13 93.0 10.6 109 3-162 8-116 (385)
140 1zk7_A HGII, reductase, mercur 98.8 2.7E-08 9.3E-13 95.9 10.3 37 1-37 1-37 (467)
141 2yqu_A 2-oxoglutarate dehydrog 98.7 1.6E-08 5.4E-13 97.2 8.3 36 4-39 1-36 (455)
142 2v3a_A Rubredoxin reductase; a 98.7 9.7E-08 3.3E-12 89.6 13.4 108 4-171 145-254 (384)
143 3ef6_A Toluene 1,2-dioxygenase 98.7 4.6E-08 1.6E-12 92.6 11.2 107 5-162 3-111 (410)
144 1jnr_A Adenylylsulfate reducta 98.7 3.4E-08 1.2E-12 98.7 10.4 36 4-39 22-61 (643)
145 1nhp_A NADH peroxidase; oxidor 98.7 6.8E-08 2.3E-12 92.5 12.1 110 5-162 1-115 (447)
146 2v3a_A Rubredoxin reductase; a 98.7 1.2E-08 4.1E-13 95.8 6.5 37 1-37 1-39 (384)
147 2gqw_A Ferredoxin reductase; f 98.7 4.1E-08 1.4E-12 92.8 10.0 106 4-163 7-114 (408)
148 2cdu_A NADPH oxidase; flavoenz 98.7 4.5E-08 1.6E-12 93.9 10.4 113 5-163 1-118 (452)
149 3h8l_A NADH oxidase; membrane 98.7 1.6E-08 5.5E-13 95.8 7.1 34 5-38 2-38 (409)
150 2yqu_A 2-oxoglutarate dehydrog 98.7 2.1E-07 7.1E-12 89.4 14.4 99 5-164 168-266 (455)
151 3fg2_P Putative rubredoxin red 98.7 1.7E-07 5.9E-12 88.5 13.2 107 5-162 2-110 (404)
152 3lad_A Dihydrolipoamide dehydr 98.7 2E-08 6.7E-13 97.2 6.7 37 3-39 2-38 (476)
153 3gyx_A Adenylylsulfate reducta 98.7 4.9E-08 1.7E-12 97.4 9.2 36 4-39 22-63 (662)
154 3hyw_A Sulfide-quinone reducta 98.7 5.9E-08 2E-12 92.4 9.3 107 1-162 1-109 (430)
155 4b63_A L-ornithine N5 monooxyg 98.7 5.7E-09 1.9E-13 101.3 2.2 59 104-162 141-214 (501)
156 3qfa_A Thioredoxin reductase 1 98.7 6.5E-08 2.2E-12 94.4 9.7 35 3-37 31-65 (519)
157 2eq6_A Pyruvate dehydrogenase 98.6 1.9E-07 6.7E-12 89.8 12.6 99 5-164 170-273 (464)
158 1m6i_A Programmed cell death p 98.6 3.2E-08 1.1E-12 95.9 7.0 135 1-162 8-144 (493)
159 1mo9_A ORF3; nucleotide bindin 98.6 1.1E-07 3.8E-12 92.9 10.6 39 1-39 40-78 (523)
160 3h28_A Sulfide-quinone reducta 98.6 1.3E-08 4.5E-13 97.0 3.8 105 5-162 3-109 (430)
161 3ntd_A FAD-dependent pyridine 98.6 7E-08 2.4E-12 95.4 8.9 111 5-162 2-117 (565)
162 1xhc_A NADH oxidase /nitrite r 98.6 8.7E-08 3E-12 89.2 8.6 105 5-162 9-113 (367)
163 1xdi_A RV3303C-LPDA; reductase 98.6 5.9E-08 2E-12 94.3 7.5 34 4-37 2-38 (499)
164 2hqm_A GR, grase, glutathione 98.6 3.4E-08 1.2E-12 95.5 5.8 35 3-37 10-44 (479)
165 2r9z_A Glutathione amide reduc 98.6 6.1E-07 2.1E-11 86.2 14.2 99 5-164 167-266 (463)
166 3fpz_A Thiazole biosynthetic e 98.6 8.3E-08 2.9E-12 87.9 7.1 37 4-40 65-103 (326)
167 1ges_A Glutathione reductase; 98.6 3.6E-07 1.2E-11 87.5 11.7 100 4-164 167-267 (450)
168 1y56_A Hypothetical protein PH 98.6 8.1E-08 2.8E-12 93.1 7.2 108 4-162 108-219 (493)
169 2eq6_A Pyruvate dehydrogenase 98.5 8.3E-08 2.8E-12 92.3 6.5 34 4-37 6-39 (464)
170 2bcg_G Secretory pathway GDP d 98.5 1.3E-07 4.4E-12 90.7 6.6 40 2-41 9-48 (453)
171 1nhp_A NADH peroxidase; oxidor 98.5 8.4E-07 2.9E-11 84.9 11.4 100 3-163 148-247 (447)
172 2e1m_A L-glutamate oxidase; L- 98.5 3E-07 1E-11 85.2 7.9 37 3-39 43-80 (376)
173 1ebd_A E3BD, dihydrolipoamide 98.5 1.1E-06 3.9E-11 84.2 12.1 100 4-164 170-272 (455)
174 2hqm_A GR, grase, glutathione 98.4 1.7E-06 6E-11 83.4 13.3 100 4-164 185-287 (479)
175 1v0j_A UDP-galactopyranose mut 98.4 2.2E-07 7.5E-12 87.5 6.7 39 1-39 4-43 (399)
176 4g6h_A Rotenone-insensitive NA 98.4 5.4E-07 1.8E-11 87.3 9.6 35 4-38 42-76 (502)
177 1v59_A Dihydrolipoamide dehydr 98.4 1E-06 3.6E-11 85.0 11.5 100 4-164 183-289 (478)
178 3dgz_A Thioredoxin reductase 2 98.4 2.2E-07 7.6E-12 90.0 6.7 34 3-36 5-38 (488)
179 4eqs_A Coenzyme A disulfide re 98.4 9.8E-07 3.4E-11 84.1 10.9 110 6-162 2-116 (437)
180 3vrd_B FCCB subunit, flavocyto 98.4 1E-06 3.5E-11 83.0 10.7 105 5-163 3-109 (401)
181 3dgh_A TRXR-1, thioredoxin red 98.4 8.7E-07 3E-11 85.7 10.4 34 3-36 8-41 (483)
182 3lxd_A FAD-dependent pyridine 98.4 2.9E-06 9.9E-11 80.3 12.9 109 4-172 152-263 (415)
183 3ef6_A Toluene 1,2-dioxygenase 98.4 1.4E-06 4.8E-11 82.3 10.7 109 4-172 143-253 (410)
184 1ojt_A Surface protein; redox- 98.4 2.5E-06 8.4E-11 82.5 12.3 100 4-164 185-288 (482)
185 1mo9_A ORF3; nucleotide bindin 98.4 3.2E-06 1.1E-10 82.5 12.8 106 5-171 215-328 (523)
186 3fg2_P Putative rubredoxin red 98.3 2.7E-06 9.3E-11 80.2 11.6 109 4-172 142-253 (404)
187 3iwa_A FAD-dependent pyridine 98.3 3.7E-06 1.3E-10 81.0 12.5 108 4-171 159-269 (472)
188 1lvl_A Dihydrolipoamide dehydr 98.3 2.5E-06 8.6E-11 81.8 11.2 98 4-164 171-270 (458)
189 3ntd_A FAD-dependent pyridine 98.3 6.3E-06 2.2E-10 81.3 14.1 106 5-171 152-278 (565)
190 1xdi_A RV3303C-LPDA; reductase 98.3 6.6E-06 2.3E-10 79.8 13.6 100 4-164 182-281 (499)
191 2gag_A Heterotetrameric sarcos 98.3 1.1E-06 3.9E-11 91.7 8.6 36 4-39 128-163 (965)
192 3hdq_A UDP-galactopyranose mut 98.3 6.9E-07 2.4E-11 83.4 6.2 37 3-39 28-64 (397)
193 1onf_A GR, grase, glutathione 98.3 6.3E-06 2.1E-10 80.0 13.1 99 5-164 177-277 (500)
194 2qae_A Lipoamide, dihydrolipoy 98.3 3.2E-06 1.1E-10 81.3 11.0 100 4-164 174-278 (468)
195 1zmd_A Dihydrolipoyl dehydroge 98.3 3.9E-06 1.3E-10 80.9 11.5 100 5-164 179-284 (474)
196 3oc4_A Oxidoreductase, pyridin 98.3 3.7E-06 1.3E-10 80.6 11.2 99 4-163 147-245 (452)
197 2a8x_A Dihydrolipoyl dehydroge 98.3 7.9E-06 2.7E-10 78.5 13.5 100 4-164 171-273 (464)
198 1fec_A Trypanothione reductase 98.3 4.9E-06 1.7E-10 80.5 11.9 99 5-164 188-290 (490)
199 1q1r_A Putidaredoxin reductase 98.3 5.4E-06 1.8E-10 78.8 11.9 108 4-171 149-261 (431)
200 2gqw_A Ferredoxin reductase; f 98.3 4.4E-06 1.5E-10 78.9 11.1 104 4-171 145-250 (408)
201 2iid_A L-amino-acid oxidase; f 98.3 1.6E-06 5.4E-11 84.2 8.2 52 109-161 242-297 (498)
202 2r9z_A Glutathione amide reduc 98.3 6.2E-07 2.1E-11 86.2 5.1 37 1-37 1-37 (463)
203 3ic9_A Dihydrolipoamide dehydr 98.3 6.5E-06 2.2E-10 79.7 12.3 98 4-163 174-275 (492)
204 1d5t_A Guanine nucleotide diss 98.3 1.1E-06 3.9E-11 83.6 6.8 40 1-40 3-42 (433)
205 2wpf_A Trypanothione reductase 98.2 1.1E-05 3.7E-10 78.1 13.6 99 5-164 192-294 (495)
206 2cdu_A NADPH oxidase; flavoenz 98.2 1E-05 3.5E-10 77.4 12.9 101 4-164 149-249 (452)
207 3urh_A Dihydrolipoyl dehydroge 98.2 9.2E-06 3.1E-10 78.7 12.4 100 4-164 198-302 (491)
208 1dxl_A Dihydrolipoamide dehydr 98.2 3.5E-06 1.2E-10 81.2 9.4 100 4-164 177-281 (470)
209 1ges_A Glutathione reductase; 98.2 6.6E-07 2.3E-11 85.7 4.3 37 1-37 1-37 (450)
210 4dna_A Probable glutathione re 98.2 7.5E-07 2.6E-11 85.6 4.6 36 1-36 1-37 (463)
211 3cgb_A Pyridine nucleotide-dis 98.2 6.9E-06 2.4E-10 79.3 11.2 98 4-163 186-283 (480)
212 1zk7_A HGII, reductase, mercur 98.2 1.1E-05 3.7E-10 77.6 12.5 98 4-164 176-273 (467)
213 2bi7_A UDP-galactopyranose mut 98.2 1.5E-06 5.2E-11 81.3 6.2 38 1-39 1-38 (384)
214 4b1b_A TRXR, thioredoxin reduc 98.2 2.2E-05 7.5E-10 76.5 14.0 99 4-164 223-321 (542)
215 1i8t_A UDP-galactopyranose mut 98.2 1.6E-06 5.3E-11 80.7 5.5 35 5-39 2-36 (367)
216 2bc0_A NADH oxidase; flavoprot 98.2 1.2E-05 4.2E-10 77.7 11.8 99 4-163 194-292 (490)
217 1trb_A Thioredoxin reductase; 98.2 1.3E-05 4.4E-10 72.8 11.4 96 4-162 145-247 (320)
218 1m6i_A Programmed cell death p 98.2 2.4E-05 8.1E-10 75.7 13.8 108 4-171 180-293 (493)
219 3ic9_A Dihydrolipoamide dehydr 98.1 1E-06 3.5E-11 85.4 3.8 37 1-37 4-41 (492)
220 3dk9_A Grase, GR, glutathione 98.1 1.3E-06 4.5E-11 84.3 4.6 35 3-37 19-53 (478)
221 4dna_A Probable glutathione re 98.1 2.1E-05 7.2E-10 75.5 13.0 99 4-164 170-270 (463)
222 4dsg_A UDP-galactopyranose mut 98.1 2.5E-06 8.4E-11 82.4 6.4 56 107-164 215-272 (484)
223 2q0l_A TRXR, thioredoxin reduc 98.1 3E-05 1E-09 70.1 13.2 93 4-162 143-241 (311)
224 3itj_A Thioredoxin reductase 1 98.1 1.2E-05 4.1E-10 73.5 10.6 92 4-161 173-270 (338)
225 3lad_A Dihydrolipoamide dehydr 98.1 1.4E-05 4.8E-10 77.0 11.5 100 4-164 180-282 (476)
226 3pl8_A Pyranose 2-oxidase; sub 98.1 1.8E-06 6.3E-11 85.8 5.2 40 1-40 43-82 (623)
227 3l8k_A Dihydrolipoyl dehydroge 98.1 1.9E-05 6.6E-10 75.8 11.9 97 5-164 173-274 (466)
228 3ics_A Coenzyme A-disulfide re 98.1 2.5E-05 8.5E-10 77.4 12.6 105 4-171 187-293 (588)
229 2wpf_A Trypanothione reductase 98.1 1.8E-06 6.3E-11 83.6 4.3 35 1-35 4-39 (495)
230 2vdc_G Glutamate synthase [NAD 98.1 2.9E-06 9.8E-11 81.1 5.6 36 4-39 122-157 (456)
231 1xhc_A NADH oxidase /nitrite r 98.1 9E-06 3.1E-10 75.5 8.5 100 5-171 144-245 (367)
232 3g5s_A Methylenetetrahydrofola 98.1 4.2E-06 1.4E-10 76.7 5.9 34 5-38 2-35 (443)
233 3s5w_A L-ornithine 5-monooxyge 98.0 8.9E-06 3E-10 78.1 8.2 136 4-161 227-376 (463)
234 3dk9_A Grase, GR, glutathione 98.0 4.5E-05 1.5E-09 73.5 13.0 98 5-163 188-294 (478)
235 3k30_A Histamine dehydrogenase 98.0 4E-06 1.4E-10 84.6 5.7 37 3-39 390-426 (690)
236 1onf_A GR, grase, glutathione 98.0 4E-06 1.4E-10 81.3 5.4 34 4-37 2-35 (500)
237 3d1c_A Flavin-containing putat 98.0 3E-05 1E-09 71.9 10.8 104 5-162 167-272 (369)
238 2q7v_A Thioredoxin reductase; 98.0 4.6E-05 1.6E-09 69.3 11.8 92 5-162 153-249 (325)
239 3cty_A Thioredoxin reductase; 98.0 4.8E-05 1.6E-09 69.0 11.5 91 5-162 156-252 (319)
240 2zbw_A Thioredoxin reductase; 98.0 5.2E-05 1.8E-09 69.2 11.7 95 5-162 153-252 (335)
241 3f8d_A Thioredoxin reductase ( 97.9 7.6E-05 2.6E-09 67.6 12.0 93 4-162 154-251 (323)
242 1fl2_A Alkyl hydroperoxide red 97.9 6.3E-05 2.2E-09 67.8 11.3 91 5-161 145-241 (310)
243 3kd9_A Coenzyme A disulfide re 97.9 4.9E-05 1.7E-09 72.6 11.0 105 5-171 149-255 (449)
244 3ab1_A Ferredoxin--NADP reduct 97.9 3E-05 1E-09 71.8 9.2 95 5-162 164-263 (360)
245 3r9u_A Thioredoxin reductase; 97.9 9.3E-05 3.2E-09 66.8 12.3 92 4-161 147-243 (315)
246 1lvl_A Dihydrolipoamide dehydr 97.9 6.2E-06 2.1E-10 79.1 4.6 33 4-36 5-37 (458)
247 1fec_A Trypanothione reductase 97.9 6.9E-06 2.4E-10 79.4 4.9 33 3-35 2-35 (490)
248 3dgh_A TRXR-1, thioredoxin red 97.9 7.3E-05 2.5E-09 72.1 12.1 97 5-163 188-290 (483)
249 4eqs_A Coenzyme A disulfide re 97.9 6.5E-05 2.2E-09 71.4 11.5 95 4-163 147-241 (437)
250 1o94_A Tmadh, trimethylamine d 97.9 1.2E-05 4E-10 81.6 5.8 36 4-39 389-424 (729)
251 1lqt_A FPRA; NADP+ derivative, 97.9 9.3E-06 3.2E-10 77.7 4.6 37 3-39 2-45 (456)
252 3dgz_A Thioredoxin reductase 2 97.8 9.8E-05 3.4E-09 71.3 11.8 98 4-163 185-288 (488)
253 1vdc_A NTR, NADPH dependent th 97.8 0.00012 4.3E-09 66.6 11.9 93 4-162 159-259 (333)
254 2x8g_A Thioredoxin glutathione 97.8 1.2E-05 4.1E-10 79.8 4.9 34 3-36 106-139 (598)
255 4b1b_A TRXR, thioredoxin reduc 97.8 1.3E-05 4.4E-10 78.1 4.6 35 4-38 42-76 (542)
256 2z3y_A Lysine-specific histone 97.8 2E-05 6.9E-10 79.0 6.1 37 4-40 107-143 (662)
257 2xag_A Lysine-specific histone 97.8 2.4E-05 8.2E-10 80.1 6.6 37 4-40 278-314 (852)
258 3gwf_A Cyclohexanone monooxyge 97.8 0.00011 3.8E-09 71.7 11.1 35 4-38 178-212 (540)
259 3uox_A Otemo; baeyer-villiger 97.8 4.4E-05 1.5E-09 74.6 8.0 35 5-39 186-220 (545)
260 1ps9_A 2,4-dienoyl-COA reducta 97.8 1.9E-05 6.5E-10 79.5 5.6 36 4-39 373-408 (671)
261 1kdg_A CDH, cellobiose dehydro 97.7 1.9E-05 6.6E-10 77.4 5.0 36 3-38 6-41 (546)
262 2a87_A TRXR, TR, thioredoxin r 97.7 0.00011 3.8E-09 67.1 9.7 92 4-161 155-251 (335)
263 3t37_A Probable dehydrogenase; 97.7 1.8E-05 6.3E-10 77.2 4.3 36 3-38 16-52 (526)
264 1cjc_A Protein (adrenodoxin re 97.7 2.7E-05 9.3E-10 74.5 5.3 37 3-39 5-43 (460)
265 3lzw_A Ferredoxin--NADP reduct 97.7 7.5E-05 2.6E-09 67.9 7.9 91 4-161 154-249 (332)
266 1gte_A Dihydropyrimidine dehyd 97.7 3.3E-05 1.1E-09 81.3 5.6 36 4-39 187-223 (1025)
267 1ju2_A HydroxynitrIle lyase; f 97.6 1.5E-05 5.1E-10 77.9 2.4 35 3-38 25-59 (536)
268 3fbs_A Oxidoreductase; structu 97.6 0.00015 5.3E-09 64.7 8.8 85 4-161 141-225 (297)
269 3qfa_A Thioredoxin reductase 1 97.6 0.00048 1.7E-08 66.9 12.5 97 5-163 211-316 (519)
270 2gv8_A Monooxygenase; FMO, FAD 97.6 0.00014 4.8E-09 69.4 8.5 35 4-38 212-247 (447)
271 3ayj_A Pro-enzyme of L-phenyla 97.6 2.9E-05 9.8E-10 77.5 3.6 36 4-39 56-100 (721)
272 1coy_A Cholesterol oxidase; ox 97.5 6E-05 2E-09 73.1 4.9 35 3-37 10-44 (507)
273 4g6h_A Rotenone-insensitive NA 97.5 0.00041 1.4E-08 67.1 10.6 50 110-161 278-331 (502)
274 3q9t_A Choline dehydrogenase a 97.5 4.8E-05 1.6E-09 74.7 3.9 36 3-38 5-41 (577)
275 2x8g_A Thioredoxin glutathione 97.5 0.0014 4.7E-08 65.0 14.2 98 5-164 287-397 (598)
276 4ap3_A Steroid monooxygenase; 97.5 0.00015 5.1E-09 71.0 7.1 35 4-38 191-225 (549)
277 1hyu_A AHPF, alkyl hydroperoxi 97.5 0.00076 2.6E-08 65.6 12.0 91 5-161 356-452 (521)
278 2xve_A Flavin-containing monoo 97.5 0.00035 1.2E-08 66.9 9.4 35 4-38 197-231 (464)
279 1n4w_A CHOD, cholesterol oxida 97.5 7.6E-05 2.6E-09 72.4 4.7 35 3-37 4-38 (504)
280 3k30_A Histamine dehydrogenase 97.4 0.0002 6.8E-09 72.2 7.2 96 5-162 524-624 (690)
281 3qvp_A Glucose oxidase; oxidor 97.4 7.3E-05 2.5E-09 73.3 3.8 35 3-37 18-53 (583)
282 1vg0_A RAB proteins geranylger 97.4 0.00026 8.8E-09 69.7 7.3 56 3-59 7-62 (650)
283 1gpe_A Protein (glucose oxidas 97.4 0.00013 4.3E-09 72.1 4.7 36 3-38 23-59 (587)
284 3fim_B ARYL-alcohol oxidase; A 97.3 6.9E-05 2.4E-09 73.4 2.7 35 4-38 2-37 (566)
285 2jbv_A Choline oxidase; alcoho 97.3 0.00012 4E-09 71.7 4.0 36 3-38 12-48 (546)
286 2gag_A Heterotetrameric sarcos 97.0 0.0018 6E-08 67.8 9.5 89 5-163 285-384 (965)
287 1o94_A Tmadh, trimethylamine d 97.0 0.0013 4.5E-08 66.6 7.7 33 5-37 529-563 (729)
288 2g1u_A Hypothetical protein TM 96.9 0.0014 4.7E-08 52.4 5.5 35 4-38 19-53 (155)
289 3klj_A NAD(FAD)-dependent dehy 96.8 0.00092 3.1E-08 62.3 4.8 36 5-40 147-182 (385)
290 3llv_A Exopolyphosphatase-rela 96.8 0.0013 4.3E-08 51.7 4.9 35 4-38 6-40 (141)
291 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.006 2.1E-07 61.2 10.9 49 109-162 578-628 (671)
292 1lqt_A FPRA; NADP+ derivative, 96.8 0.0055 1.9E-07 58.4 10.0 35 5-39 148-203 (456)
293 1lss_A TRK system potassium up 96.8 0.0016 5.5E-08 50.8 5.1 34 4-37 4-37 (140)
294 1w4x_A Phenylacetone monooxyge 96.7 0.0037 1.3E-07 61.1 8.4 36 4-39 186-221 (542)
295 1id1_A Putative potassium chan 96.6 0.0027 9.2E-08 50.6 5.7 34 4-37 3-36 (153)
296 3fwz_A Inner membrane protein 96.6 0.002 7E-08 50.4 4.9 35 4-38 7-41 (140)
297 1cjc_A Protein (adrenodoxin re 96.6 0.024 8.3E-07 53.9 13.0 35 5-39 146-201 (460)
298 4e12_A Diketoreductase; oxidor 96.6 0.0026 8.8E-08 56.5 5.5 38 1-38 1-38 (283)
299 3ic5_A Putative saccharopine d 96.5 0.0026 8.8E-08 47.9 4.7 34 4-37 5-39 (118)
300 2ewd_A Lactate dehydrogenase,; 96.5 0.0029 1E-07 57.1 5.5 38 1-38 1-39 (317)
301 1gte_A Dihydropyrimidine dehyd 96.5 0.014 4.7E-07 61.5 11.3 33 5-37 333-366 (1025)
302 4a9w_A Monooxygenase; baeyer-v 96.5 0.0028 9.4E-08 58.0 5.3 32 5-37 164-195 (357)
303 4gcm_A TRXR, thioredoxin reduc 96.3 0.0034 1.1E-07 56.5 5.0 35 5-39 146-180 (312)
304 1bg6_A N-(1-D-carboxylethyl)-L 96.3 0.0038 1.3E-07 57.4 5.1 37 1-37 1-37 (359)
305 2hmt_A YUAA protein; RCK, KTN, 96.2 0.0055 1.9E-07 47.8 5.1 33 5-37 7-39 (144)
306 1t2d_A LDH-P, L-lactate dehydr 96.2 0.0058 2E-07 55.2 5.6 38 1-38 1-39 (322)
307 3c85_A Putative glutathione-re 96.1 0.0051 1.8E-07 50.5 4.8 34 5-38 40-74 (183)
308 3l4b_C TRKA K+ channel protien 96.1 0.0042 1.4E-07 52.7 4.1 33 6-38 2-34 (218)
309 3qha_A Putative oxidoreductase 96.0 0.0044 1.5E-07 55.4 4.0 38 1-38 12-49 (296)
310 4a5l_A Thioredoxin reductase; 96.0 0.0056 1.9E-07 55.0 4.6 35 4-38 152-186 (314)
311 3i83_A 2-dehydropantoate 2-red 95.9 0.0082 2.8E-07 54.3 5.2 33 5-37 3-35 (320)
312 2iid_A L-amino-acid oxidase; f 95.9 0.028 9.7E-07 54.0 9.4 38 3-40 32-69 (498)
313 1f0y_A HCDH, L-3-hydroxyacyl-C 95.9 0.0096 3.3E-07 53.3 5.5 34 5-38 16-49 (302)
314 3h8l_A NADH oxidase; membrane 95.8 0.017 6E-07 54.0 7.4 47 110-162 224-270 (409)
315 4e21_A 6-phosphogluconate dehy 95.8 0.0077 2.6E-07 55.2 4.7 38 1-38 19-56 (358)
316 3g79_A NDP-N-acetyl-D-galactos 95.8 0.0074 2.5E-07 57.4 4.5 36 3-38 17-54 (478)
317 1pzg_A LDH, lactate dehydrogen 95.8 0.011 3.9E-07 53.5 5.6 35 4-38 9-44 (331)
318 3ado_A Lambda-crystallin; L-gu 95.7 0.0088 3E-07 53.7 4.5 34 5-38 7-40 (319)
319 3h28_A Sulfide-quinone reducta 95.7 0.017 5.7E-07 54.6 6.7 51 108-162 204-256 (430)
320 3gg2_A Sugar dehydrogenase, UD 95.7 0.011 3.6E-07 56.1 5.2 34 5-38 3-36 (450)
321 3ghy_A Ketopantoate reductase 95.6 0.012 4.1E-07 53.6 5.3 35 1-36 1-35 (335)
322 2raf_A Putative dinucleotide-b 95.6 0.013 4.5E-07 49.2 5.2 35 4-38 19-53 (209)
323 2dpo_A L-gulonate 3-dehydrogen 95.6 0.0099 3.4E-07 53.5 4.6 34 5-38 7-40 (319)
324 3sx6_A Sulfide-quinone reducta 95.6 0.027 9.2E-07 53.3 7.8 49 109-161 213-268 (437)
325 3hn2_A 2-dehydropantoate 2-red 95.6 0.01 3.4E-07 53.5 4.6 33 5-37 3-35 (312)
326 3cky_A 2-hydroxymethyl glutara 95.6 0.0091 3.1E-07 53.4 4.1 38 1-38 1-38 (301)
327 1ks9_A KPA reductase;, 2-dehyd 95.5 0.014 4.6E-07 51.8 5.2 33 6-38 2-34 (291)
328 4dio_A NAD(P) transhydrogenase 95.5 0.015 5.2E-07 53.7 5.4 35 4-38 190-224 (405)
329 4g65_A TRK system potassium up 95.5 0.005 1.7E-07 58.6 2.3 60 3-62 2-67 (461)
330 2ew2_A 2-dehydropantoate 2-red 95.5 0.013 4.6E-07 52.5 5.0 33 5-37 4-36 (316)
331 3g17_A Similar to 2-dehydropan 95.5 0.013 4.4E-07 52.2 4.8 33 5-37 3-35 (294)
332 3k96_A Glycerol-3-phosphate de 95.5 0.012 4.1E-07 53.9 4.6 35 4-38 29-63 (356)
333 3doj_A AT3G25530, dehydrogenas 95.5 0.017 5.7E-07 52.0 5.5 35 4-38 21-55 (310)
334 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.015 5.1E-07 49.2 4.8 33 4-36 31-63 (223)
335 2x5o_A UDP-N-acetylmuramoylala 95.4 0.011 3.9E-07 55.9 4.5 35 4-38 5-39 (439)
336 3tl2_A Malate dehydrogenase; c 95.4 0.017 5.6E-07 51.9 5.2 35 3-37 7-42 (315)
337 1lld_A L-lactate dehydrogenase 95.4 0.016 5.3E-07 52.4 5.1 34 4-37 7-42 (319)
338 2y0c_A BCEC, UDP-glucose dehyd 95.4 0.015 5.1E-07 55.6 5.1 35 4-38 8-42 (478)
339 2q3e_A UDP-glucose 6-dehydroge 95.4 0.013 4.5E-07 55.9 4.7 38 1-38 2-41 (467)
340 1y56_A Hypothetical protein PH 95.4 0.045 1.5E-06 52.6 8.5 58 112-171 265-324 (493)
341 3lk7_A UDP-N-acetylmuramoylala 95.3 0.016 5.5E-07 55.0 5.2 34 4-37 9-42 (451)
342 3p2y_A Alanine dehydrogenase/p 95.3 0.017 5.7E-07 53.0 4.9 35 4-38 184-218 (381)
343 1y6j_A L-lactate dehydrogenase 95.3 0.019 6.6E-07 51.7 5.2 34 4-37 7-42 (318)
344 2izz_A Pyrroline-5-carboxylate 95.2 0.019 6.4E-07 51.9 5.1 38 1-38 19-60 (322)
345 4huj_A Uncharacterized protein 95.2 0.0097 3.3E-07 50.5 3.0 35 4-38 23-58 (220)
346 2uyy_A N-PAC protein; long-cha 95.2 0.023 7.8E-07 51.1 5.6 35 4-38 30-64 (316)
347 2hjr_A Malate dehydrogenase; m 95.2 0.022 7.6E-07 51.5 5.4 34 5-38 15-49 (328)
348 4b63_A L-ornithine N5 monooxyg 95.2 0.041 1.4E-06 53.0 7.6 34 5-38 247-282 (501)
349 1kyq_A Met8P, siroheme biosynt 95.1 0.012 4.3E-07 51.4 3.4 34 4-37 13-46 (274)
350 2z3y_A Lysine-specific histone 95.1 0.27 9.1E-06 49.1 13.5 51 108-161 401-457 (662)
351 3mog_A Probable 3-hydroxybutyr 95.1 0.022 7.7E-07 54.4 5.4 38 1-38 1-39 (483)
352 3pid_A UDP-glucose 6-dehydroge 95.1 0.017 5.8E-07 54.1 4.4 34 4-38 36-69 (432)
353 3eag_A UDP-N-acetylmuramate:L- 95.0 0.045 1.5E-06 49.5 6.8 34 5-38 5-39 (326)
354 3pqe_A L-LDH, L-lactate dehydr 95.0 0.028 9.5E-07 50.7 5.4 37 1-37 1-40 (326)
355 3l6d_A Putative oxidoreductase 95.0 0.026 9E-07 50.5 5.2 35 4-38 9-43 (306)
356 1zej_A HBD-9, 3-hydroxyacyl-CO 94.9 0.021 7.3E-07 50.6 4.5 34 4-38 12-45 (293)
357 3l9w_A Glutathione-regulated p 94.9 0.023 7.8E-07 53.2 4.9 36 3-38 3-38 (413)
358 3vtf_A UDP-glucose 6-dehydroge 94.9 0.026 8.9E-07 52.9 5.2 35 4-38 21-55 (444)
359 2v6b_A L-LDH, L-lactate dehydr 94.9 0.026 8.9E-07 50.5 5.0 32 6-37 2-35 (304)
360 3gvi_A Malate dehydrogenase; N 94.9 0.031 1.1E-06 50.3 5.5 35 4-38 7-42 (324)
361 4fk1_A Putative thioredoxin re 94.9 0.093 3.2E-06 46.7 8.6 33 5-37 147-180 (304)
362 3pef_A 6-phosphogluconate dehy 94.8 0.028 9.6E-07 49.8 5.1 34 5-38 2-35 (287)
363 3g0o_A 3-hydroxyisobutyrate de 94.8 0.025 8.5E-07 50.6 4.7 35 4-38 7-41 (303)
364 4a7p_A UDP-glucose dehydrogena 94.8 0.03 1E-06 52.8 5.4 35 4-38 8-42 (446)
365 3ego_A Probable 2-dehydropanto 94.8 0.028 9.4E-07 50.4 4.9 32 5-37 3-34 (307)
366 3dhn_A NAD-dependent epimerase 94.8 0.023 7.9E-07 48.2 4.2 38 1-38 1-39 (227)
367 1ez4_A Lactate dehydrogenase; 94.8 0.028 9.6E-07 50.5 4.9 37 1-37 2-40 (318)
368 3dtt_A NADP oxidoreductase; st 94.8 0.033 1.1E-06 48.0 5.2 35 4-38 19-53 (245)
369 3d0o_A L-LDH 1, L-lactate dehy 94.7 0.032 1.1E-06 50.2 5.2 35 3-37 5-41 (317)
370 3p7m_A Malate dehydrogenase; p 94.7 0.04 1.4E-06 49.5 5.6 35 4-38 5-40 (321)
371 3k6j_A Protein F01G10.3, confi 94.6 0.031 1.1E-06 52.8 4.9 34 5-38 55-88 (460)
372 1mv8_A GMD, GDP-mannose 6-dehy 94.6 0.026 8.9E-07 53.3 4.5 33 6-38 2-34 (436)
373 1jw9_B Molybdopterin biosynthe 94.6 0.033 1.1E-06 48.2 4.8 33 5-37 32-65 (249)
374 3hwr_A 2-dehydropantoate 2-red 94.6 0.028 9.6E-07 50.6 4.5 33 4-37 19-51 (318)
375 1guz_A Malate dehydrogenase; o 94.6 0.036 1.2E-06 49.7 5.2 33 6-38 2-36 (310)
376 2qyt_A 2-dehydropantoate 2-red 94.6 0.025 8.7E-07 50.8 4.2 31 5-35 9-45 (317)
377 1z82_A Glycerol-3-phosphate de 94.6 0.035 1.2E-06 50.4 5.1 34 4-37 14-47 (335)
378 1evy_A Glycerol-3-phosphate de 94.6 0.017 5.7E-07 53.3 3.0 32 6-37 17-48 (366)
379 1ur5_A Malate dehydrogenase; o 94.6 0.04 1.4E-06 49.3 5.4 33 5-37 3-36 (309)
380 2rcy_A Pyrroline carboxylate r 94.6 0.039 1.3E-06 48.0 5.2 35 4-38 4-42 (262)
381 3oj0_A Glutr, glutamyl-tRNA re 94.5 0.014 4.8E-07 45.8 2.0 35 4-38 21-55 (144)
382 1x13_A NAD(P) transhydrogenase 94.5 0.038 1.3E-06 51.5 5.2 35 4-38 172-206 (401)
383 1zcj_A Peroxisomal bifunctiona 94.5 0.036 1.2E-06 52.7 5.2 34 5-38 38-71 (463)
384 3pdu_A 3-hydroxyisobutyrate de 94.5 0.031 1.1E-06 49.5 4.5 33 6-38 3-35 (287)
385 4ezb_A Uncharacterized conserv 94.4 0.027 9.3E-07 50.7 3.9 35 4-38 24-59 (317)
386 4dll_A 2-hydroxy-3-oxopropiona 94.4 0.032 1.1E-06 50.3 4.3 34 5-38 32-65 (320)
387 2a9f_A Putative malic enzyme ( 94.4 0.044 1.5E-06 50.1 5.1 35 3-37 187-222 (398)
388 2vns_A Metalloreductase steap3 94.4 0.049 1.7E-06 45.9 5.2 34 5-38 29-62 (215)
389 1l7d_A Nicotinamide nucleotide 94.4 0.046 1.6E-06 50.7 5.4 35 4-38 172-206 (384)
390 1hdo_A Biliverdin IX beta redu 94.3 0.057 2E-06 44.7 5.5 37 1-38 1-38 (206)
391 1txg_A Glycerol-3-phosphate de 94.3 0.038 1.3E-06 50.0 4.7 30 6-35 2-31 (335)
392 1pjc_A Protein (L-alanine dehy 94.3 0.049 1.7E-06 50.0 5.4 33 5-37 168-200 (361)
393 2h78_A Hibadh, 3-hydroxyisobut 94.2 0.039 1.3E-06 49.2 4.6 34 5-38 4-37 (302)
394 3dfu_A Uncharacterized protein 94.2 0.014 4.9E-07 49.6 1.5 32 4-35 6-37 (232)
395 3qsg_A NAD-binding phosphogluc 94.1 0.045 1.5E-06 49.2 4.7 34 4-37 24-58 (312)
396 4ffl_A PYLC; amino acid, biosy 94.1 0.057 2E-06 49.6 5.5 34 5-38 2-35 (363)
397 3ktd_A Prephenate dehydrogenas 94.1 0.05 1.7E-06 49.4 5.0 33 5-37 9-41 (341)
398 3ggo_A Prephenate dehydrogenas 94.1 0.05 1.7E-06 48.9 4.9 34 5-38 34-69 (314)
399 1oju_A MDH, malate dehydrogena 94.1 0.049 1.7E-06 48.3 4.7 33 6-38 2-36 (294)
400 3tri_A Pyrroline-5-carboxylate 94.1 0.066 2.3E-06 47.2 5.6 35 4-38 3-40 (280)
401 2aef_A Calcium-gated potassium 94.0 0.021 7.1E-07 48.9 2.1 34 4-38 9-42 (234)
402 1a5z_A L-lactate dehydrogenase 94.0 0.051 1.7E-06 49.0 4.7 32 6-37 2-35 (319)
403 1vl6_A Malate oxidoreductase; 93.9 0.06 2E-06 49.2 5.1 35 3-37 191-226 (388)
404 2eez_A Alanine dehydrogenase; 93.9 0.063 2.2E-06 49.4 5.4 34 4-37 166-199 (369)
405 3gpi_A NAD-dependent epimerase 93.9 0.074 2.5E-06 46.9 5.7 37 1-38 1-37 (286)
406 1vpd_A Tartronate semialdehyde 93.9 0.05 1.7E-06 48.4 4.5 34 5-38 6-39 (299)
407 1dlj_A UDP-glucose dehydrogena 93.9 0.041 1.4E-06 51.3 4.1 32 6-38 2-33 (402)
408 2zyd_A 6-phosphogluconate dehy 93.8 0.053 1.8E-06 51.8 4.8 35 4-38 15-49 (480)
409 2f1k_A Prephenate dehydrogenas 93.8 0.062 2.1E-06 47.2 5.0 32 6-37 2-33 (279)
410 3c24_A Putative oxidoreductase 93.8 0.07 2.4E-06 47.2 5.3 33 5-37 12-45 (286)
411 1jay_A Coenzyme F420H2:NADP+ o 93.8 0.061 2.1E-06 45.1 4.7 32 6-37 2-34 (212)
412 3nep_X Malate dehydrogenase; h 93.8 0.062 2.1E-06 48.1 5.0 34 5-38 1-36 (314)
413 1x0v_A GPD-C, GPDH-C, glycerol 93.8 0.038 1.3E-06 50.6 3.6 35 4-38 8-49 (354)
414 3d1l_A Putative NADP oxidoredu 93.8 0.062 2.1E-06 46.9 4.8 34 4-37 10-44 (266)
415 1y7t_A Malate dehydrogenase; N 93.7 0.043 1.5E-06 49.6 3.9 37 1-37 1-45 (327)
416 2pv7_A T-protein [includes: ch 93.7 0.064 2.2E-06 47.8 4.9 34 5-38 22-56 (298)
417 3k5i_A Phosphoribosyl-aminoimi 93.7 0.074 2.5E-06 49.6 5.5 36 1-37 21-56 (403)
418 3gt0_A Pyrroline-5-carboxylate 93.7 0.072 2.4E-06 46.0 5.0 34 5-38 3-40 (247)
419 1yqg_A Pyrroline-5-carboxylate 93.6 0.066 2.3E-06 46.6 4.8 32 6-37 2-34 (263)
420 1ldn_A L-lactate dehydrogenase 93.6 0.077 2.6E-06 47.7 5.3 34 4-37 6-41 (316)
421 4gwg_A 6-phosphogluconate dehy 93.6 0.075 2.6E-06 50.6 5.4 36 3-38 3-38 (484)
422 2iz1_A 6-phosphogluconate dehy 93.6 0.075 2.6E-06 50.7 5.4 35 4-38 5-39 (474)
423 3vku_A L-LDH, L-lactate dehydr 93.6 0.079 2.7E-06 47.6 5.2 34 4-37 9-44 (326)
424 4gbj_A 6-phosphogluconate dehy 93.6 0.046 1.6E-06 48.6 3.7 34 5-38 6-39 (297)
425 2vhw_A Alanine dehydrogenase; 93.6 0.08 2.7E-06 48.9 5.4 34 4-37 168-201 (377)
426 2o3j_A UDP-glucose 6-dehydroge 93.5 0.061 2.1E-06 51.4 4.6 34 5-38 10-45 (481)
427 2gf2_A Hibadh, 3-hydroxyisobut 93.5 0.068 2.3E-06 47.4 4.7 33 6-38 2-34 (296)
428 1yj8_A Glycerol-3-phosphate de 93.4 0.063 2.2E-06 49.5 4.5 34 5-38 22-62 (375)
429 1hyh_A L-hicdh, L-2-hydroxyiso 93.4 0.072 2.5E-06 47.7 4.7 33 5-37 2-36 (309)
430 3h8v_A Ubiquitin-like modifier 93.4 0.075 2.6E-06 46.9 4.6 34 4-37 36-70 (292)
431 3ius_A Uncharacterized conserv 93.4 0.075 2.6E-06 46.7 4.7 34 5-38 6-39 (286)
432 3ldh_A Lactate dehydrogenase; 93.4 0.092 3.2E-06 47.2 5.2 34 4-37 21-56 (330)
433 1nyt_A Shikimate 5-dehydrogena 93.3 0.093 3.2E-06 46.0 5.2 34 4-37 119-152 (271)
434 3ew7_A LMO0794 protein; Q8Y8U8 93.3 0.1 3.5E-06 43.8 5.2 33 6-38 2-35 (221)
435 2pgd_A 6-phosphogluconate dehy 93.3 0.086 2.9E-06 50.4 5.3 34 5-38 3-36 (482)
436 3ond_A Adenosylhomocysteinase; 93.3 0.087 3E-06 49.8 5.1 34 4-37 265-298 (488)
437 3o0h_A Glutathione reductase; 93.3 0.084 2.9E-06 50.5 5.2 36 4-39 191-226 (484)
438 2p4q_A 6-phosphogluconate dehy 93.2 0.095 3.3E-06 50.2 5.5 35 4-38 10-44 (497)
439 3phh_A Shikimate dehydrogenase 93.2 0.11 3.6E-06 45.4 5.3 34 5-38 119-152 (269)
440 2g5c_A Prephenate dehydrogenas 93.2 0.093 3.2E-06 46.2 5.0 32 6-37 3-36 (281)
441 1pjq_A CYSG, siroheme synthase 93.2 0.083 2.9E-06 50.1 5.0 34 4-37 12-45 (457)
442 2i6t_A Ubiquitin-conjugating e 93.2 0.091 3.1E-06 46.8 4.9 34 5-38 15-50 (303)
443 3enk_A UDP-glucose 4-epimerase 93.2 0.12 4E-06 46.8 5.8 38 1-38 2-40 (341)
444 2vdc_G Glutamate synthase [NAD 93.1 0.09 3.1E-06 49.9 5.1 34 5-38 265-299 (456)
445 1np3_A Ketol-acid reductoisome 93.0 0.12 4.1E-06 46.9 5.5 33 5-37 17-49 (338)
446 3gvp_A Adenosylhomocysteinase 92.9 0.11 3.8E-06 48.2 5.1 34 4-37 220-253 (435)
447 4b4o_A Epimerase family protei 92.9 0.12 4.1E-06 45.8 5.4 34 5-38 1-35 (298)
448 3e8x_A Putative NAD-dependent 92.9 0.12 4.1E-06 44.0 5.1 35 4-38 21-56 (236)
449 3rui_A Ubiquitin-like modifier 92.9 0.12 4E-06 46.6 5.1 34 4-37 34-68 (340)
450 3h2s_A Putative NADH-flavin re 92.8 0.12 4.2E-06 43.4 5.1 32 6-37 2-34 (224)
451 3ce6_A Adenosylhomocysteinase; 92.8 0.11 3.7E-06 49.6 5.1 35 4-38 274-308 (494)
452 2egg_A AROE, shikimate 5-dehyd 92.8 0.11 3.7E-06 46.2 4.9 34 4-37 141-175 (297)
453 2cvz_A Dehydrogenase, 3-hydrox 92.8 0.086 3E-06 46.5 4.2 32 6-38 3-34 (289)
454 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.8 0.1 3.6E-06 49.7 5.0 33 5-37 2-34 (478)
455 3vps_A TUNA, NAD-dependent epi 92.8 0.13 4.3E-06 46.0 5.4 35 4-38 7-42 (321)
456 3orq_A N5-carboxyaminoimidazol 92.8 0.15 5E-06 47.1 5.9 35 4-38 12-46 (377)
457 2ahr_A Putative pyrroline carb 92.7 0.091 3.1E-06 45.6 4.2 34 4-37 3-36 (259)
458 4aj2_A L-lactate dehydrogenase 92.7 0.14 4.7E-06 46.2 5.5 34 4-37 19-54 (331)
459 1qyc_A Phenylcoumaran benzylic 92.7 0.12 4E-06 46.0 5.1 38 1-38 1-39 (308)
460 2rir_A Dipicolinate synthase, 92.7 0.13 4.5E-06 45.7 5.3 34 4-37 157-190 (300)
461 3d4o_A Dipicolinate synthase s 92.7 0.13 4.5E-06 45.6 5.3 34 4-37 155-188 (293)
462 3c7a_A Octopine dehydrogenase; 92.6 0.064 2.2E-06 50.1 3.3 31 5-35 3-34 (404)
463 1yb4_A Tartronic semialdehyde 92.6 0.07 2.4E-06 47.3 3.4 33 5-38 4-36 (295)
464 3q2o_A Phosphoribosylaminoimid 92.6 0.15 5.3E-06 47.2 5.8 35 4-38 14-48 (389)
465 3fi9_A Malate dehydrogenase; s 92.6 0.14 4.9E-06 46.3 5.4 35 3-37 7-44 (343)
466 1zud_1 Adenylyltransferase THI 92.6 0.11 3.9E-06 44.8 4.6 34 4-37 28-62 (251)
467 2wtb_A MFP2, fatty acid multif 92.5 0.088 3E-06 53.0 4.3 34 5-38 313-346 (725)
468 1qyd_A Pinoresinol-lariciresin 92.5 0.13 4.3E-06 45.9 5.0 38 1-38 1-39 (313)
469 2hk9_A Shikimate dehydrogenase 92.5 0.12 4.2E-06 45.3 4.8 33 5-37 130-162 (275)
470 3don_A Shikimate dehydrogenase 92.5 0.11 3.7E-06 45.6 4.4 35 4-38 117-152 (277)
471 1b8p_A Protein (malate dehydro 92.5 0.08 2.7E-06 47.9 3.7 36 1-36 1-45 (329)
472 2zqz_A L-LDH, L-lactate dehydr 92.5 0.14 4.8E-06 46.1 5.2 35 3-37 8-44 (326)
473 1p77_A Shikimate 5-dehydrogena 92.4 0.11 3.7E-06 45.6 4.3 34 4-37 119-152 (272)
474 2wm3_A NMRA-like family domain 92.3 0.15 5.3E-06 45.1 5.3 38 1-38 2-41 (299)
475 1i36_A Conserved hypothetical 92.2 0.12 4E-06 45.0 4.3 30 6-35 2-31 (264)
476 3b1f_A Putative prephenate deh 92.2 0.14 4.6E-06 45.3 4.7 34 4-37 6-41 (290)
477 3ojo_A CAP5O; rossmann fold, c 92.2 0.098 3.3E-06 49.0 3.9 34 5-38 12-45 (431)
478 3h5n_A MCCB protein; ubiquitin 92.2 0.15 5E-06 46.6 5.0 34 4-37 118-152 (353)
479 3u62_A Shikimate dehydrogenase 92.0 0.2 6.8E-06 43.3 5.4 33 6-38 110-143 (253)
480 4gx0_A TRKA domain protein; me 92.0 0.15 5.3E-06 49.8 5.3 35 5-39 349-383 (565)
481 2d4a_B Malate dehydrogenase; a 92.0 0.16 5.6E-06 45.3 5.0 32 6-37 1-33 (308)
482 1wdk_A Fatty oxidation complex 91.9 0.11 3.6E-06 52.3 4.0 34 5-38 315-348 (715)
483 2we8_A Xanthine dehydrogenase; 91.8 0.2 6.8E-06 46.2 5.3 37 3-39 203-239 (386)
484 3tnl_A Shikimate dehydrogenase 91.7 0.21 7.1E-06 44.7 5.3 34 4-37 154-188 (315)
485 3jyo_A Quinate/shikimate dehyd 91.7 0.21 7.1E-06 44.0 5.2 34 4-37 127-161 (283)
486 3h9u_A Adenosylhomocysteinase; 91.7 0.19 6.5E-06 46.8 5.1 34 4-37 211-244 (436)
487 1mld_A Malate dehydrogenase; o 91.5 0.15 5.3E-06 45.6 4.3 32 6-37 2-36 (314)
488 2x0j_A Malate dehydrogenase; o 91.4 0.19 6.6E-06 44.4 4.7 33 5-37 1-35 (294)
489 2dbq_A Glyoxylate reductase; D 91.4 0.24 8.1E-06 44.8 5.4 34 5-38 151-184 (334)
490 3pwz_A Shikimate dehydrogenase 91.4 0.25 8.4E-06 43.2 5.3 34 4-37 120-154 (272)
491 4e4t_A Phosphoribosylaminoimid 91.3 0.26 8.8E-06 46.2 5.8 35 4-38 35-69 (419)
492 2yjz_A Metalloreductase steap4 90.6 0.037 1.3E-06 46.1 0.0 35 4-38 19-53 (201)
493 2d5c_A AROE, shikimate 5-dehyd 91.3 0.22 7.5E-06 43.3 5.0 32 6-37 118-149 (263)
494 1gpj_A Glutamyl-tRNA reductase 91.3 0.21 7.2E-06 46.5 5.1 34 4-37 167-201 (404)
495 3fbt_A Chorismate mutase and s 91.2 0.22 7.5E-06 43.7 4.8 34 4-37 122-156 (282)
496 3o8q_A Shikimate 5-dehydrogena 91.2 0.24 8.1E-06 43.5 5.0 34 4-37 126-160 (281)
497 1smk_A Malate dehydrogenase, g 91.1 0.15 5.3E-06 45.9 3.9 35 4-38 8-45 (326)
498 1leh_A Leucine dehydrogenase; 91.1 0.25 8.6E-06 45.1 5.3 33 4-36 173-205 (364)
499 3n58_A Adenosylhomocysteinase; 91.1 0.24 8.1E-06 46.2 5.0 34 4-37 247-280 (464)
500 1edz_A 5,10-methylenetetrahydr 90.9 0.21 7.1E-06 44.6 4.4 34 4-37 177-211 (320)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=7.7e-49 Score=374.72 Aligned_cols=370 Identities=22% Similarity=0.361 Sum_probs=292.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+||++|+.|+++|++|+||||.+.+...++++.+++++.++|+++|+++.+.+.+.+.....++....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 46899999999999999999999999999999999888888999999999999999999999988888877777776543
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
+.....+.........+...+.++|..|.+.|.+.+..++++++++|++++.++++++|++.+|++++||+||+|||.+|
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcCh
Confidence 44444443322111112344579999999999998866899999999999999999999999999999999999999999
Q ss_pred HhHhHh-CCC-CCcccCceeEEEeeecCccCCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCCCCChhHHH
Q 015331 163 VVAKWL-GFK-KPAFAGRSDIRGCTDFKLRHGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKELEGNPDKTK 240 (409)
Q Consensus 163 ~vr~~l-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (409)
.+|+.+ +.. .+.+.+..++.+.+..+........+..+++++.+++++|.++++..|++.+..+.. ...+++...
T Consensus 182 ~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~ 258 (407)
T 3rp8_A 182 ALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAG---LAEDRDTLR 258 (407)
T ss_dssp SSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---CSCCTTTHH
T ss_pred HHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcC---CCCCchhHH
Confidence 999998 765 444566667676666554333344556677888889999999999888887764433 233455677
Q ss_pred HHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhHHHHHHHH
Q 015331 241 QFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALEDGIILARC 320 (409)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~da~~La~~ 320 (409)
+.+.+.+..+.+.+.++++.........+......+. .+|..+||+|+|||||.++|++|||+|+||+||..|++.
T Consensus 259 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~ 334 (407)
T 3rp8_A 259 ADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPF----SRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAV 334 (407)
T ss_dssp HHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCC----SCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCC----CceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHH
Confidence 8899999999998888887664433211221111121 467789999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc----chhHHHHHHHHHHHHHhhhhhh
Q 015331 321 IAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY----DGKIINFLRDKIFSVLLGRLMM 396 (409)
Q Consensus 321 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~----~~~~~~~~r~~~~~~~~~~~~~ 396 (409)
|... . ..+++|+.|+++|++++..+++.+..++. .++....+|+.+|.....+.+.
T Consensus 335 L~~~-------------------~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~ 394 (407)
T 3rp8_A 335 FRQT-------------------R-DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDMQLTEAWYQELREETGERII 394 (407)
T ss_dssp HHSC-------------------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHSCCSHHHH
T ss_pred HhcC-------------------C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCHHHHHHHHHHHhhccHHHHH
Confidence 9851 1 57889999999999999999999988865 7888999999999977766666
Q ss_pred hhh
Q 015331 397 KIL 399 (409)
Q Consensus 397 ~~~ 399 (409)
+..
T Consensus 395 ~~~ 397 (407)
T 3rp8_A 395 NGM 397 (407)
T ss_dssp HHH
T ss_pred Hhh
Confidence 554
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=2.5e-43 Score=337.10 Aligned_cols=347 Identities=20% Similarity=0.230 Sum_probs=237.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCC--cceeEEechhHHHHHHHcCCchHHHhhc---cccc-CeEEE
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRV--TGFAITLWTNAWRALDAVGISDSLRQQH---IQLQ-GMVVA 78 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---~~~~-~~~~~ 78 (409)
++|+||||||+||++|+.|+++|++|+||||.+.+.. .|.++.++++++++|+++|+.+.+.... .... ...+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 5899999999999999999999999999999987754 3678889999999999999987665422 1111 11222
Q ss_pred eccCCcccccc-ccc-ccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCC-eEEEEEcCCCEEecCEEE
Q 015331 79 SSVSCQPASEI-SFK-TKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGL-FKLVNLADGAVFKTKVLI 155 (409)
Q Consensus 79 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~-~~~v~~~~g~~~~ad~vV 155 (409)
. ......... ... ............++|..|.+.|.+.++ ..++++++|++++..++ .++|++.||++++||+||
T Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~-~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvV 159 (412)
T 4hb9_A 82 N-ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLA-NTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLV 159 (412)
T ss_dssp C-TTSCEEEC--------------CEEEEEHHHHHHHHHTTCT-TTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEE
T ss_pred c-CCcceecccCCccccccccccccceEeeHHHHHHHHHhhcc-ceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEE
Confidence 1 111111000 000 011111233456899999999998874 57999999999987654 689999999999999999
Q ss_pred EcCCCchHhHhHhCCCCCc-ccCceeEEEeeecCccCC------C-ccccceeec--CceEEE---EEec--------CC
Q 015331 156 GCDGVNSVVAKWLGFKKPA-FAGRSDIRGCTDFKLRHG------L-EPKFQQFLG--KGFRYG---FLPC--------ND 214 (409)
Q Consensus 156 ~AdG~~s~vr~~lg~~~~~-~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~--~~~~~~---~~p~--------~~ 214 (409)
+|||.+|.||+.++..... +.+...+.+......... + ......+.. ++..+. ..|. ..
T Consensus 160 gADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
T 4hb9_A 160 GADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVEASLAE 239 (412)
T ss_dssp ECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSCGGGCC
T ss_pred ECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEEEeccC
Confidence 9999999999999765443 345555555443322100 0 000011111 111111 1111 11
Q ss_pred --CeEEEEEEEcCCCC-CCCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEE
Q 015331 215 --QTVYWFFNWCPSNQ-DKELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCV 291 (409)
Q Consensus 215 --~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 291 (409)
+...|......+.. ........+.+.+.+.+.+..|.+.+.++++.........+......+. .+|..+||+|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~----~~~~~grv~L 315 (412)
T 4hb9_A 240 IDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHL----LPWKSSTVTL 315 (412)
T ss_dssp EEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCC----CCCCCCSEEE
T ss_pred CCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhcccccc----ccccccCEEE
Confidence 11223322222221 1223456677788888999999999999998876665544444433332 3678899999
Q ss_pred eccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHH
Q 015331 292 AGDAFHPMTPDIGQGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYI 371 (409)
Q Consensus 292 vGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~ 371 (409)
+|||||.++|+.|||+|+||+||..|+++|.....+ .++++++|+.|+++|++++.++++.|..
T Consensus 316 iGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~----------------~~~~~~aL~~Ye~~R~~~~~~~~~~s~~ 379 (412)
T 4hb9_A 316 LGDAIHNMTPMTGSGANTALRDALLLTQKLASVASG----------------HEELVKAISDYEQQMRAYANEIVGISLR 379 (412)
T ss_dssp CTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTT----------------SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcC----------------CcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998775 2467899999999999999999999876
Q ss_pred hc
Q 015331 372 VG 373 (409)
Q Consensus 372 ~~ 373 (409)
.+
T Consensus 380 ~~ 381 (412)
T 4hb9_A 380 SA 381 (412)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 3
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=1.5e-41 Score=330.92 Aligned_cols=347 Identities=19% Similarity=0.152 Sum_probs=244.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++|+++.+.+. .+.....+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~--- 83 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHF--- 83 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEE---
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-cccccccc---
Confidence 34678999999999999999999999999999999998877789999999999999999999887654 22211111
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcCCC---EEecCEEE
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLADGA---VFKTKVLI 155 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~g~---~~~ad~vV 155 (409)
.+. .+.+...... ....+.+++..+++.|.+.+. +++++++++|++++.++++++|++.++. ++++|+||
T Consensus 84 -~~~---~~~~~~~~~~-~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vV 158 (500)
T 2qa1_A 84 -GGL---PIDFGVLEGA-WQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLV 158 (500)
T ss_dssp -TTE---EEEGGGSTTG-GGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEE
T ss_pred -cce---ecccccCCCC-CCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEE
Confidence 111 1111111111 112357889999999988663 6899999999999999999999988875 79999999
Q ss_pred EcCCCchHhHhHhCCCCCcc-cCceeEEEeeecCccCCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCC-CCCCC
Q 015331 156 GCDGVNSVVAKWLGFKKPAF-AGRSDIRGCTDFKLRHGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQ-DKELE 233 (409)
Q Consensus 156 ~AdG~~s~vr~~lg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~ 233 (409)
+|||.+|.+|+.+|+..+.. .....+.+.+..+. . ...+..++.++.+++++|.+++.+.+.+....... .....
T Consensus 159 gADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 235 (500)
T 2qa1_A 159 GCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE--L-QPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETP 235 (500)
T ss_dssp ECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC--C-CCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----C
T ss_pred ECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC--C-CCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCC
Confidence 99999999999998876543 23334444443332 1 11233445666778899999987655554432211 11133
Q ss_pred CChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhH
Q 015331 234 GNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALED 313 (409)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~d 313 (409)
.+++++.+.+.+.+..... .........++.. ....++|..+||+|+|||||.++|+.|||+|+||+|
T Consensus 236 ~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~-----~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~D 303 (500)
T 2qa1_A 236 PSWHEVADAWKRLTGDDIA-------HAEPVWVSAFGNA-----TRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQD 303 (500)
T ss_dssp CCHHHHHHHHHHHHSCCCT-------TSEEEEEEEEECC-----EEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHhcCCCCC-------ccceeEEEEeccC-----cEEccccccCCEEEEEccccCCCCccccchhhhHHH
Confidence 4566666666555431100 0000111112211 123457778999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc---chhHHHHHHHHHHH
Q 015331 314 GIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY---DGKIINFLRDKIFS 388 (409)
Q Consensus 314 a~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~---~~~~~~~~r~~~~~ 388 (409)
|..|++.|...+.+. ..+++|+.|+++|++++.+++..+..+.. ..+....+|+.++.
T Consensus 304 A~~La~~La~~~~g~-----------------~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~R~~~~~ 364 (500)
T 2qa1_A 304 AVNLGWKLGAVVNGT-----------------ATEELLDSYHSERHAVGKRLLMNTQAQGLLFLSGPEVQPLRDVLTE 364 (500)
T ss_dssp HHHHHHHHHHHHTTS-----------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 999999999988653 45789999999999999999998866654 44555667776554
No 4
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=2.1e-41 Score=329.85 Aligned_cols=346 Identities=18% Similarity=0.125 Sum_probs=246.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++|+++.+.+. .+.....+ .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~----~ 85 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV-ETSTQGHF----G 85 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC-CEESEEEE----T
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc-ccccccee----c
Confidence 468999999999999999999999999999999998887889999999999999999999887654 22211111 1
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcCCC---EEecCEEEEc
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLADGA---VFKTKVLIGC 157 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~g~---~~~ad~vV~A 157 (409)
+. .+.+...... ....+.+++..+++.|.+.+. +++++++++|++++.++++++|++.++. +++||+||+|
T Consensus 86 ~~---~~~~~~~~~~-~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgA 161 (499)
T 2qa2_A 86 GR---PVDFGVLEGA-HYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGC 161 (499)
T ss_dssp TE---EEEGGGSTTC-CCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEEC
T ss_pred ce---ecccccCCCC-CCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEc
Confidence 11 1122111111 112357899999999988663 6899999999999999888999988875 7999999999
Q ss_pred CCCchHhHhHhCCCCCcc-cCceeEEEeeecCccCCCccccceeecCceEEEEEecCCCeEEEEEEEcCCC-CCCCCCCC
Q 015331 158 DGVNSVVAKWLGFKKPAF-AGRSDIRGCTDFKLRHGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSN-QDKELEGN 235 (409)
Q Consensus 158 dG~~s~vr~~lg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 235 (409)
||.+|.+|+.+|+..+.. .....+.+.+..+.. ...+..++.++.+++++|.+++.+.+.+...... .......+
T Consensus 162 DG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~ 238 (499)
T 2qa2_A 162 DGGRSTVRKAAGFDFPGTSASREMFLADIRGCEI---TPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPP 238 (499)
T ss_dssp CCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCC---CCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCC
T ss_pred cCcccHHHHHcCCCCCCCCCccEEEEEEEEECCC---CcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCC
Confidence 999999999998876543 233344444443321 1123345566677889999988765555443222 11223455
Q ss_pred hhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhHHH
Q 015331 236 PDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALEDGI 315 (409)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~da~ 315 (409)
++++.+.+.+.+..... .........++.. ....++|..+||+|+|||||.++|+.|||+|+||+||.
T Consensus 239 ~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~-----~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~ 306 (499)
T 2qa2_A 239 YQEVAAAWQRLTGQDIS-------HGEPVWVSAFGDP-----ARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSV 306 (499)
T ss_dssp HHHHHHHHHHHHSCCCT-------TCEEEEEEEECCC-----EEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCC-------ccceeEEEEEeCC-----cEEcccccCCCEEEEecccccCCCccccchhhhHHHHH
Confidence 66666666655431100 0000111122221 12345778899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc---chhHHHHHHHHHHHH
Q 015331 316 ILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY---DGKIINFLRDKIFSV 389 (409)
Q Consensus 316 ~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~---~~~~~~~~r~~~~~~ 389 (409)
.|++.|...+.+. ..+++|+.|+++|++++..++..+..+.. ..+....+|+.++..
T Consensus 307 ~La~~La~~l~g~-----------------~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~R~~~~~~ 366 (499)
T 2qa2_A 307 NLGWKLAAVVSGR-----------------APAGLLDTYHEERHPVGRRLLMNTQAQGMLFLSGDEMQPLRDVLSEL 366 (499)
T ss_dssp HHHHHHHHHHTTS-----------------SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Confidence 9999999988652 45689999999999999999998876654 445556677766543
No 5
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=7.5e-41 Score=318.36 Aligned_cols=341 Identities=19% Similarity=0.169 Sum_probs=243.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCC--cceeEEech-hHHHHHHHcCCchHHHhhcccccCeEEEe
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRV--TGFAITLWT-NAWRALDAVGISDSLRQQHIQLQGMVVAS 79 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~--~~~~~~~~~-~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 79 (409)
+++||+||||||+|+++|+.|+++|++|+|||+.+.+.. .+.++.+.+ .+.++|+++|+++.+.....+... .++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~~ 103 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIAD 103 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEEC
Confidence 568999999999999999999999999999999876543 455666654 568999999999998776655444 3332
Q ss_pred ccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCC
Q 015331 80 SVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDG 159 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG 159 (409)
..+........+... ......++|..|.+.|.+.++++.++++++|++++.+++.++|++.+|++++||+||+|||
T Consensus 104 -~~g~~~~~~~~~~~~---~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG 179 (398)
T 2xdo_A 104 -EKGNILSTKNVKPEN---RFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANG 179 (398)
T ss_dssp -SSSEEEEECCCGGGT---TSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSC
T ss_pred -CCCCchhhccccccC---CCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCC
Confidence 233222111001111 1122368999999999999877899999999999998888999999998899999999999
Q ss_pred CchHhHhHhCCCCCcccCceeEEEeeecCc-cCC-----CccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCC--
Q 015331 160 VNSVVAKWLGFKKPAFAGRSDIRGCTDFKL-RHG-----LEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKE-- 231 (409)
Q Consensus 160 ~~s~vr~~lg~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-- 231 (409)
.+|.+|+.++...+.+.+..++.+.+.... ..+ .......+++++..+.++|.+++...|++.+..+.....
T Consensus 180 ~~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
T 2xdo_A 180 GMSKVRKFVTDTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTPDEWKNQT 259 (398)
T ss_dssp TTCSCCTTTCCCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEECCTTC---C
T ss_pred cchhHHhhccCCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEecCccccccc
Confidence 999999998765555555555555433111 000 011122334566666778998888777776644322110
Q ss_pred --CCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCC-C--cEEEeccCCCCCCCCCcch
Q 015331 232 --LEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISK-G--NVCVAGDAFHPMTPDIGQG 306 (409)
Q Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~v~lvGDAA~~~~P~~G~G 306 (409)
...+++...+.+.+.+..+.+.+.++++.. ..+..+++...+.. .+|.. + ||+|+|||||.++|+.|||
T Consensus 260 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~rv~LiGDAAh~~~P~~GqG 333 (398)
T 2xdo_A 260 QVDFQNRNSVVDFLLKEFSDWDERYKELIHTT--LSFVGLATRIFPLE----KPWKSKRPLPITMIGDAAHLMPPFAGQG 333 (398)
T ss_dssp CSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHC--SCCEEEEEEECCCC----SCCCSCCSSCEEECTHHHHCCCCTTSCS
T ss_pred ccCcCCHHHHHHHHHHHHcCCChHHHHHHhCc--ccceeeeeEeccCC----CCcccCCCccEEEEeehhccCCCccCcc
Confidence 123566777888888888888888888752 22222222221111 13433 5 8999999999999999999
Q ss_pred hhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhch-HHHHHHHHHHHhhhhHHHHHHHhHHhc
Q 015331 307 GCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKR-NEIGLKRYATERRWRSCELISMAYIVG 373 (409)
Q Consensus 307 ~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~y~~~r~~~~~~~~~~s~~~~ 373 (409)
+|+||+||..|++.|... . .+ .+++|+.|+++|++++..++..+....
T Consensus 334 ~n~ai~Da~~La~~L~~~--~-----------------~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~ 382 (398)
T 2xdo_A 334 VNSGLVDALILSDNLADG--K-----------------FNSIEEAVKNYEQQMFIYGKEAQEESTQNE 382 (398)
T ss_dssp HHHHHHHHHHHHHHHHSC--C-----------------SSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc--c-----------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999873 1 13 689999999999999999988875443
No 6
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.1e-42 Score=326.18 Aligned_cols=354 Identities=17% Similarity=0.165 Sum_probs=252.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|+.|+++|++|+|||+.+.+...+++..+++.+.+.|+++|+++.+.....+.....++.. ++
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~g 84 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYH-DG 84 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEE-TT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeC-CC
Confidence 47999999999999999999999999999999988777788999999999999999999988876666666665543 22
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCC---CCeEEeCceEEEEEEeCCeE--EEEEcCCCEEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP---SGTIRYSSKVVSVEESGLFK--LVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~---~~~i~~~~~v~~v~~~~~~~--~v~~~~g~~~~ad~vV~Ad 158 (409)
.....+...... .....+.++|..|.+.|.+.+. +++++++++|++++.+++++ .|++.+|+++++|+||+||
T Consensus 85 ~~~~~~~~~~~~--~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 85 ELLRYFNYSSVD--ARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp EEEEEEETTSSC--GGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECC
T ss_pred CEEEecchHHhc--ccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECC
Confidence 222222221111 1122357899999999998764 57999999999999988888 8999999899999999999
Q ss_pred CCchHhHhHhCCCCC-c--ccCc--eeEEEeeecCccCCCccccceeecC-ceEEEEEecCCCeEEEEEEEcCCCCCC-C
Q 015331 159 GVNSVVAKWLGFKKP-A--FAGR--SDIRGCTDFKLRHGLEPKFQQFLGK-GFRYGFLPCNDQTVYWFFNWCPSNQDK-E 231 (409)
Q Consensus 159 G~~s~vr~~lg~~~~-~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~-~ 231 (409)
|.+|.+|+.++.... . +.+. .++.+.+..+. +.. . .++.+ +.+++++|.+++.+.|.+.+..+.... .
T Consensus 163 G~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 237 (399)
T 2x3n_A 163 GIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVA--ERN--R-LYVDSQGGLAYFYPIGFDRARLVVSFPREEARELM 237 (399)
T ss_dssp CTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHH--HCE--E-EEECTTSCEEEEEEETTTEEEEEEECCHHHHHHHH
T ss_pred CCChHHHHHhCCCccccCCCCCCceEEEEEEecCCC--CCc--c-EEEcCCCcEEEEEEcCCCEEEEEEEeCcccccccc
Confidence 999999999987643 2 4455 55554443221 111 2 45566 677899999998887776543221000 0
Q ss_pred CCCChhHHHHHHHHHhcCCCHHHH-HHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhH
Q 015331 232 LEGNPDKTKQFVLSKCHDLPEQVK-AIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAA 310 (409)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~a 310 (409)
...+. +.+.+.+..+.+.+. ..++.........+++... ....+|..+||+|+|||||.++|++|||+|+|
T Consensus 238 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~a 309 (399)
T 2x3n_A 238 ADTRG----ESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGY----LNLDRYWADNVAMLGDAIHNVHPITGQGMNLA 309 (399)
T ss_dssp HSTTS----HHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCC----EECSCSEETTEEECGGGTEECCGGGCCHHHHH
T ss_pred ccCCH----HHHHHHHhhcCCcchhhHHhcCCccceEEechhhc----ccccccccCcEEEEechhccCCCcccccHHHH
Confidence 01223 334445556666552 3334332112233444331 12336778999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc----chhHHHHHHHHH
Q 015331 311 LEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY----DGKIINFLRDKI 386 (409)
Q Consensus 311 l~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~----~~~~~~~~r~~~ 386 (409)
++||..|++.|...++.. .+.+++|+.|+++|++++..++..+..+.. .+++...+ +.+
T Consensus 310 l~da~~La~~L~~~~~~~----------------~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~~ 372 (399)
T 2x3n_A 310 IEDASALADALDLALRDA----------------CALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVF-DTA 372 (399)
T ss_dssp HHHHHHHHHHHHHHHTTS----------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HC-
T ss_pred HHHHHHHHHHHHhhhccc----------------chHHHHHHHHHHHhccHHHHHHHHHHHhhhhhcccCchHHHH-HHH
Confidence 999999999999976531 256899999999999999999999977754 55666677 777
Q ss_pred HHHH
Q 015331 387 FSVL 390 (409)
Q Consensus 387 ~~~~ 390 (409)
|+.+
T Consensus 373 ~~~~ 376 (399)
T 2x3n_A 373 LQGS 376 (399)
T ss_dssp ----
T ss_pred Hhhh
Confidence 7643
No 7
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=8.4e-41 Score=317.92 Aligned_cols=334 Identities=19% Similarity=0.212 Sum_probs=235.5
Q ss_pred CC-CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc-CCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEE
Q 015331 1 ME-EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL-RVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVA 78 (409)
Q Consensus 1 M~-~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~-~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|+ .++||+||||||+|+++|+.|+++|++|+|||+.+.+ ...++++.+++++.++|+++|+.+ .....+.....++
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~~~~~~~~~ 78 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSISVPSSSMEYV 78 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGTCBCCCEEEEE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccccccccceEEE
Confidence 43 4689999999999999999999999999999998875 445788899999999999999987 3444555555554
Q ss_pred eccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 79 SSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
...++........ ....+.+..+.+.|.+.+++++++++++|++++.+++.++|++.+|+++++|+||+||
T Consensus 79 ~~~~g~~~~~~~~---------~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~Ad 149 (397)
T 2vou_A 79 DALTGERVGSVPA---------DWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGAD 149 (397)
T ss_dssp ETTTCCEEEEEEC---------CCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECC
T ss_pred ecCCCCccccccC---------cccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECC
Confidence 4313322221111 1124678899999998888899999999999999988999999999999999999999
Q ss_pred CCchHhHhHhCCCC-CcccCceeEEEeeecCccCC-----CccccceeecCceEEEEEecCCC------eEEEEEEEcCC
Q 015331 159 GVNSVVAKWLGFKK-PAFAGRSDIRGCTDFKLRHG-----LEPKFQQFLGKGFRYGFLPCNDQ------TVYWFFNWCPS 226 (409)
Q Consensus 159 G~~s~vr~~lg~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~~~~ 226 (409)
|.+|.+|+.++ .. +.+.+..++.+.+....... ....+..+.+++..+.++|++++ ...|.+....+
T Consensus 150 G~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 228 (397)
T 2vou_A 150 GGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVA 228 (397)
T ss_dssp CTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECC
T ss_pred CcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEEEecCC
Confidence 99999999998 43 23344455555543211100 01123334567667777887653 44454444322
Q ss_pred CCC--CCC--C-------------CChhHHHHHHHHHhc-CCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCc
Q 015331 227 NQD--KEL--E-------------GNPDKTKQFVLSKCH-DLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGN 288 (409)
Q Consensus 227 ~~~--~~~--~-------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (409)
... ... . ...+...+.+.+.+. .+++ +.++++..... ..+++... ..++|..+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~-----~~~~~~~gr 300 (397)
T 2vou_A 229 EGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNASSP--FVTVVADA-----TVDRMVHGR 300 (397)
T ss_dssp TTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCSSC--EEEEEEEB-----CCSCSEETT
T ss_pred CccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccCCc--ceeeeeee-----cCCceecCc
Confidence 210 000 0 002223344555543 5667 77777654321 13333322 223677899
Q ss_pred EEEeccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHH
Q 015331 289 VCVAGDAFHPMTPDIGQGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISM 368 (409)
Q Consensus 289 v~lvGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~ 368 (409)
|+|+|||||.++|+.|||+|+||+||..|++.|.. . .+.+++|++|+++|++++..++..
T Consensus 301 v~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~-----------------~~~~~~L~~Ye~~R~~~~~~~~~~ 360 (397)
T 2vou_A 301 VLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---N-----------------HDLRGSLQSWETRQLQQGHAYLNK 360 (397)
T ss_dssp EEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---C-----------------SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---C-----------------CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999985 2 256899999999999999999999
Q ss_pred hHHhcc
Q 015331 369 AYIVGY 374 (409)
Q Consensus 369 s~~~~~ 374 (409)
|..++.
T Consensus 361 s~~~~~ 366 (397)
T 2vou_A 361 VKKMAS 366 (397)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 866654
No 8
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=4.3e-41 Score=331.74 Aligned_cols=350 Identities=19% Similarity=0.104 Sum_probs=240.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+||++|+.|+++|++|+|||+.+.+...+++..+++.++++|+++|+++.+.+......... + .+
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~-~---~~ 124 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLP-F---AG 124 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCC-B---TT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCce-e---CC
Confidence 5799999999999999999999999999999999888888999999999999999999998877655433210 1 11
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEE--cCC-CEEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNL--ADG-AVFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~--~~g-~~~~ad~vV~Ad 158 (409)
.....+.+...... ....+.+++..+.+.|.+.+. +++|+++++|++++.+++.++|++ .+| .+++||+||+||
T Consensus 125 ~~~~~~~~~~~~~~-~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~AD 203 (570)
T 3fmw_A 125 IFTQGLDFGLVDTR-HPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCD 203 (570)
T ss_dssp BCTTCCBGGGSCCS-CCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECS
T ss_pred cccccccccccCCC-CCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcC
Confidence 11112222222111 122457899999999988763 689999999999999988888888 677 689999999999
Q ss_pred CCchHhHhHhCCCCCcc-cCceeEEEeeecCccCCCccccceeecCceEEEE-EecCCCeE-EEEEEEcCCC-CCCCCCC
Q 015331 159 GVNSVVAKWLGFKKPAF-AGRSDIRGCTDFKLRHGLEPKFQQFLGKGFRYGF-LPCNDQTV-YWFFNWCPSN-QDKELEG 234 (409)
Q Consensus 159 G~~s~vr~~lg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~~~~-~~~~~~~ 234 (409)
|.+|.+|+.+|+..+.. +....+...+...... ..+...+.+..++++ +|.+++.. .+++...... .......
T Consensus 204 G~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~ 280 (570)
T 3fmw_A 204 GGRSTVRRLAADRFPGTEATVRALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPV 280 (570)
T ss_dssp CSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CCC
T ss_pred CCCchHHHHcCCCCccceeeeEEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCC
Confidence 99999999998876544 3334444433333222 112222333344555 79988865 4555443322 1112334
Q ss_pred ChhHHHHHHHHHhcCCCHHHHHHHHcCCCC-ceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhH
Q 015331 235 NPDKTKQFVLSKCHDLPEQVKAIVENTPLD-SILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALED 313 (409)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~d 313 (409)
+.++ +.+.+...... .+...... ....+++.. ...++|..+||+|+|||||.++|+.|||+|+||+|
T Consensus 281 ~~~~----~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~-----~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~D 348 (570)
T 3fmw_A 281 TLED----LGAAVARVRGT---PLTLTEPVSWLSRFGDAS-----RQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQD 348 (570)
T ss_dssp CHHH----HHHHTTSSSSC---CCCCCSCCEEEEEECCCC-----EECSCSEETTEEECGGGTEECCCCSSCHHHHHHHH
T ss_pred CHHH----HHHHHHHHhhc---ccccceeeeeeEEeeccc-----ccccccccCCEEEEEecceecCCCcCcCHhHHHHH
Confidence 4443 44444332221 01111112 222333322 23457788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc---chhH-HHHHHHHHHHH
Q 015331 314 GIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY---DGKI-INFLRDKIFSV 389 (409)
Q Consensus 314 a~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~---~~~~-~~~~r~~~~~~ 389 (409)
|..|++.|..++++. ..+++|+.|+++|++++..++..+..+.. ..+. ...+|+.++..
T Consensus 349 A~~La~~La~~~~g~-----------------~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~lR~~~~~l 411 (570)
T 3fmw_A 349 AVNLGWKLAARVRGW-----------------GSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEEL 411 (570)
T ss_dssp HHHHHHHHHHHHHSC-----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 999999999987653 56789999999999999999999976654 3333 88899988875
Q ss_pred H
Q 015331 390 L 390 (409)
Q Consensus 390 ~ 390 (409)
+
T Consensus 412 ~ 412 (570)
T 3fmw_A 412 L 412 (570)
T ss_dssp T
T ss_pred h
Confidence 4
No 9
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=1.2e-40 Score=318.13 Aligned_cols=339 Identities=27% Similarity=0.320 Sum_probs=234.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCc-eEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEe
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIR-SLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVAS 79 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~-V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 79 (409)
|++++||+||||||+||++|+.|+++|++ |+|||+.+.+...++++.+++++.++|+++|+++.+...+.+.....++.
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~ 80 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYID 80 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEc
Confidence 77789999999999999999999999999 99999998887788999999999999999999999888777666655554
Q ss_pred ccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC---C-CeEEeCceEEEEEEeCCeEEEEEcC---C--CEEe
Q 015331 80 SVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP---S-GTIRYSSKVVSVEESGLFKLVNLAD---G--AVFK 150 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~---~-~~i~~~~~v~~v~~~~~~~~v~~~~---g--~~~~ 150 (409)
. .+........... .......+.++|..|.+.|.+.+. + ++++++++|++++. +++++|++.+ | .+++
T Consensus 81 ~-~g~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ 157 (410)
T 3c96_A 81 Q-SGATVWSEPRGVE-AGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALG 157 (410)
T ss_dssp T-TSCEEEEEECGGG-GTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEE
T ss_pred C-CCCEEeeccCCcc-ccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEe
Confidence 3 2322211111100 011223457899999999988663 3 58999999999988 6678888765 6 4789
Q ss_pred cCEEEEcCCCchHhHhHhCCCC--CcccCceeEEEeeecCccCCCccccceeec--CceEEEEEecCC-----C--eEEE
Q 015331 151 TKVLIGCDGVNSVVAKWLGFKK--PAFAGRSDIRGCTDFKLRHGLEPKFQQFLG--KGFRYGFLPCND-----Q--TVYW 219 (409)
Q Consensus 151 ad~vV~AdG~~s~vr~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~-----~--~~~~ 219 (409)
||+||+|||.+|.+|+.++... +.+.+...+.+....+.. .......+++ .+..++++|+++ + .+.|
T Consensus 158 ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w 235 (410)
T 3c96_A 158 ADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRF--LDGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNW 235 (410)
T ss_dssp ESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCC--TTSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEE
T ss_pred cCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccc--cCCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEE
Confidence 9999999999999999996543 233344444444433211 1111222333 345678899863 3 3455
Q ss_pred EEEEcCCC---CCCCCCCChhHHHHHHHHHhcCCCH---HHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEec
Q 015331 220 FFNWCPSN---QDKELEGNPDKTKQFVLSKCHDLPE---QVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAG 293 (409)
Q Consensus 220 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvG 293 (409)
.+...... .............+.+.+.+..+.. .+.++++... ....+++....+ .++|..+||+|+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~----~~~~~~grv~LvG 309 (410)
T 3c96_A 236 VCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVDRDP----LPHWGRGRITLLG 309 (410)
T ss_dssp EEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEECCC----CSCCCBTTEEECT
T ss_pred EEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCc--ccceeecccCCC----ccccccCCEEEEe
Confidence 55443210 0000011111123556666665543 2456665542 233344433222 2367789999999
Q ss_pred cCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhH
Q 015331 294 DAFHPMTPDIGQGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAY 370 (409)
Q Consensus 294 DAA~~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~ 370 (409)
||||.++|++|||+|+||+||..|++.|... ...+++|++|+++|++++..++..++
T Consensus 310 DAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--------------------~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 310 DAAHLMYPMGANGASQAILDGIELAAALARN--------------------ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC--------------------SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCccchhHHHHHHHHHHHHHHHhcc--------------------CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999872 15688999999999999999998875
No 10
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=5e-40 Score=324.25 Aligned_cols=344 Identities=22% Similarity=0.243 Sum_probs=240.9
Q ss_pred CC-CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCe---E
Q 015331 1 ME-EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGM---V 76 (409)
Q Consensus 1 M~-~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~---~ 76 (409)
|+ .++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++|+++.+.+.+.+.... .
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCE
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCccccccee
Confidence 54 4689999999999999999999999999999999988778889999999999999999999998877655433 1
Q ss_pred --EEeccCCcccccc--cccc----cCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCC----eEEEE
Q 015331 77 --VASSVSCQPASEI--SFKT----KGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGL----FKLVN 142 (409)
Q Consensus 77 --~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~----~~~v~ 142 (409)
......+.....+ .+.. .....+.....+++..|.+.|.+.+. +++++++++|++++.+++ +++++
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~ 160 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTAR 160 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEE
T ss_pred eeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEE
Confidence 2222222222211 1110 01111333557899999999988663 689999999999999988 89998
Q ss_pred EcCC---CEEecCEEEEcCCCchHhHhHhCCCCCcccCcee-EEEeeecCccC--CCcc-ccceeecCceEEEEEecCC-
Q 015331 143 LADG---AVFKTKVLIGCDGVNSVVAKWLGFKKPAFAGRSD-IRGCTDFKLRH--GLEP-KFQQFLGKGFRYGFLPCND- 214 (409)
Q Consensus 143 ~~~g---~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~~~~~-~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~p~~~- 214 (409)
+.++ .+++||+||+|||.+|.+|+.+|+.......... +...+...... .... .+..+..++...+++|..+
T Consensus 161 ~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~ 240 (535)
T 3ihg_A 161 LAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRP 240 (535)
T ss_dssp EEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSST
T ss_pred EEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCC
Confidence 8886 6899999999999999999999887554322211 11112211111 1111 1233445666677889886
Q ss_pred CeEEEEEEEcCCCCCCCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEecc
Q 015331 215 QTVYWFFNWCPSNQDKELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGD 294 (409)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGD 294 (409)
+.+.+.+.+.++........+++.+.+.+.+.+......+ .......+++. ....++|..+||+|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~-----~~~a~~~~~grv~LvGD 308 (535)
T 3ihg_A 241 DRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKP-------ELVDIQGWEMA-----ARIAERWREGRVFLAGD 308 (535)
T ss_dssp TEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCC-------EEEEEEEEEEE-----EEEESCSEETTEEECTT
T ss_pred CEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCce-------eEEEeeEeeee-----EEEECccccCCEEEEec
Confidence 4444444444433222234456666666666553211110 01111222222 22345778899999999
Q ss_pred CCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhc
Q 015331 295 AFHPMTPDIGQGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVG 373 (409)
Q Consensus 295 AA~~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~ 373 (409)
|||.++|+.|||+|+||+||..|++.|..++++. ..+++|++|+++|++++..+++.|....
T Consensus 309 AAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~-----------------~~~~lL~~Ye~eR~p~a~~~~~~s~~~~ 370 (535)
T 3ihg_A 309 AAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQ-----------------AGAGLLDTYEDERKVAAELVVAEALAIY 370 (535)
T ss_dssp TTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTS-----------------SCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCccCCccccccccHHHHHHHHHHHhcCC-----------------CcHHHHHhhHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999988653 4567899999999999999999986554
No 11
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=8.5e-41 Score=316.01 Aligned_cols=324 Identities=23% Similarity=0.283 Sum_probs=231.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|+.|+++|++|+|||+.+.+...++++.+++.+.+.|+++|+++.+...+.+.....++.. +
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--g 88 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH--N 88 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET--T
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC--C
Confidence 57999999999999999999999999999999988877789999999999999999999998887777777766654 3
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.....++.. ....+.++|..|.+.|.+.+. +++++++++|++++. ++ +|++.+|+++++|+||+|||.+
T Consensus 89 ~~~~~~~~~------~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~--~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 89 KSVSKETFN------GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG--RLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp EEEEEECGG------GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT--EEEETTSCEEECSEEEECCCTT
T ss_pred ceeeeccCC------CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC--EEEECCCCEEEcCEEEECCCcc
Confidence 332222221 122457899999999988663 689999999999987 33 7888889899999999999999
Q ss_pred hHhHhHhCCCC-CcccCceeEEEeeecCc---cCCC-ccccce--eecCceEEEEEecCCCeEEEEEEEcCCCCCCCCCC
Q 015331 162 SVVAKWLGFKK-PAFAGRSDIRGCTDFKL---RHGL-EPKFQQ--FLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKELEG 234 (409)
Q Consensus 162 s~vr~~lg~~~-~~~~~~~~~~~~~~~~~---~~~~-~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (409)
|.+|+.++... +.+.+..++.+.+.... +... ...... +++++.+++++|.+++...|++.+..... .
T Consensus 160 s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~---- 234 (379)
T 3alj_A 160 SKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADP-R---- 234 (379)
T ss_dssp CHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTCT-T----
T ss_pred HHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCCC-C----
Confidence 99999998642 22344555555554421 1111 112222 45677788999999998888877754211 0
Q ss_pred ChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhHH
Q 015331 235 NPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALEDG 314 (409)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~da 314 (409)
++.+.+.+.+.....+ .+.++++.........+++.... ..++|..+||+|+|||||.++|++|||+|+|++||
T Consensus 235 -~~~l~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da 308 (379)
T 3alj_A 235 -GSSVPIDLEVWVEMFP-FLEPCLIEAAKLKTARYDKYETT----KLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNA 308 (379)
T ss_dssp -TTCSSCCHHHHHHHCG-GGHHHHHHHHTCTTCCEEEEEEE----EESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHH
T ss_pred -HHHHHHHHhcCCchhc-cHHHHHhhCCccceEEecccccC----CCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHH
Confidence 1222222222111111 11133332111111122222111 12366789999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHh
Q 015331 315 IILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMA 369 (409)
Q Consensus 315 ~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s 369 (409)
..|++.|... .+.+++|+.|+++|++++..++..+
T Consensus 309 ~~La~~L~~~--------------------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 309 FSLSQDLEEG--------------------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHHTTSS--------------------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccc--------------------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998651 1568899999999999999999987
No 12
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.8e-39 Score=320.15 Aligned_cols=352 Identities=17% Similarity=0.158 Sum_probs=240.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccC---eEEEec
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQG---MVVASS 80 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~---~~~~~~ 80 (409)
++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++|+.+.+.+.+.+... ..+...
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 47999999999999999999999999999999988877788999999999999999999998877665532 222222
Q ss_pred cCCcccccccccccC-----CCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcC---C--CEEe
Q 015331 81 VSCQPASEISFKTKG-----NRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLAD---G--AVFK 150 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~-----~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~---g--~~~~ 150 (409)
..+..+..+.+.... ...+.....+++..+++.|.+.+... ++++++|++++.+++++++++.+ | .+++
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~ 184 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLRTGATRAVH 184 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETTTCCEEEEE
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEE
Confidence 223222223322111 01223446789999999999887555 99999999999998888888766 6 3799
Q ss_pred cCEEEEcCCCchHhHhHhCCCCCcccC-ceeEEEeeecCccC---CCccccc-eeecCc-eEEEEEecCCCeEEEEEEEc
Q 015331 151 TKVLIGCDGVNSVVAKWLGFKKPAFAG-RSDIRGCTDFKLRH---GLEPKFQ-QFLGKG-FRYGFLPCNDQTVYWFFNWC 224 (409)
Q Consensus 151 ad~vV~AdG~~s~vr~~lg~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~-~~~~~~-~~~~~~p~~~~~~~~~~~~~ 224 (409)
||+||+|||.+|.+|+.+|+..+.... ...+...+..+... .....+. .++.++ ..++++|.+++. .|.+.+.
T Consensus 185 a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~-~~~~~~~ 263 (549)
T 2r0c_A 185 ARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRG-LYRLTVG 263 (549)
T ss_dssp EEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSS-EEEEEEE
T ss_pred eCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCc-EEEEEec
Confidence 999999999999999999887654322 22333333332100 0011222 233444 567889987643 2333332
Q ss_pred CCCCCCCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCc
Q 015331 225 PSNQDKELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIG 304 (409)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G 304 (409)
.+.. . .+++++.+.+.+.+.. ... ........+++. ....++|..+||+|+|||||.++|+.|
T Consensus 264 ~~~~---~-~~~~~~~~~l~~~~~~-~~~-------~~~~~~~~~~~~-----~~~a~~~~~grv~L~GDAAH~~~P~~G 326 (549)
T 2r0c_A 264 VDDA---S-KSTMDSFELVRRAVAF-DTE-------IEVLSDSEWHLT-----HRVADSFSAGRVFLTGDAAHTLSPSGG 326 (549)
T ss_dssp CSTT---C-CSCCCHHHHHHHHBCS-CCC-------CEEEEEEEEEEC-----CEECSCSEETTEEECGGGTEECCCGGG
T ss_pred CCCC---C-CCHHHHHHHHHHHhCC-CCc-------eeEEEEecchhH-----hhhHHhhcCCcEEEEccccccCCCccC
Confidence 2111 1 4455666666666542 100 000111122221 123456778999999999999999999
Q ss_pred chhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc---c------
Q 015331 305 QGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY---D------ 375 (409)
Q Consensus 305 ~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~---~------ 375 (409)
||+|+||+||..|++.|...+++. ..+++|+.|+++|++++.++++.|..+.. .
T Consensus 327 qG~n~gi~DA~~La~~La~~l~g~-----------------a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~ 389 (549)
T 2r0c_A 327 FGMNTGIGSAADLGWKLAATLRGW-----------------AGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPG 389 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-----------------SCTTTTHHHHHHHHHHHHHHHHC----------CCCCTT
T ss_pred CccccccHHHHHHHHHHHHHHcCC-----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 999999999999999999987652 34678999999999999999999877654 1
Q ss_pred ----hhHHHHHHHHHHHHHh
Q 015331 376 ----GKIINFLRDKIFSVLL 391 (409)
Q Consensus 376 ----~~~~~~~r~~~~~~~~ 391 (409)
++....+|+.+...+.
T Consensus 390 ~~~~~~~~~~~R~~~~~~~~ 409 (549)
T 2r0c_A 390 LHDDGPRGERIRAAVAEKLE 409 (549)
T ss_dssp TTCCSHHHHHHHHHHHHHHH
T ss_pred ccccCcchHHHHHHHHHHHH
Confidence 4456677777766553
No 13
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=8.1e-40 Score=328.27 Aligned_cols=342 Identities=18% Similarity=0.172 Sum_probs=237.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-----cCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEE
Q 015331 4 DEDIVIVGAGIAGLTTSLALHR-----LGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVA 78 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~-----~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
++||+||||||+||++|+.|++ +|++|+||||.+.+...+++..++++++++|+++|+++.+.+.+.++..+.++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5799999999999999999999 99999999999888778899999999999999999999998877777777776
Q ss_pred eccCCccccc-ccccccC-CCCCccccccCHHHHHHHHHhhCC-----CCeEEeCceEEEEEEeC--------CeEEEEE
Q 015331 79 SSVSCQPASE-ISFKTKG-NRGGHEVRSVKRSLLMEALERELP-----SGTIRYSSKVVSVEESG--------LFKLVNL 143 (409)
Q Consensus 79 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~i~r~~l~~~l~~~~~-----~~~i~~~~~v~~v~~~~--------~~~~v~~ 143 (409)
.......+.. ..+.... .........++|..+++.|.+.+. +++++++++|++++.++ +.++|++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~ 167 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTL 167 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEE
Confidence 5432111111 1111110 111233457999999999988763 27999999999998875 4577665
Q ss_pred c------------------------------------------CC--CEEecCEEEEcCCCchHhHhHhCCCCCcccCce
Q 015331 144 A------------------------------------------DG--AVFKTKVLIGCDGVNSVVAKWLGFKKPAFAGRS 179 (409)
Q Consensus 144 ~------------------------------------------~g--~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~~~~ 179 (409)
. +| ++++||+||+|||.+|.||+.+|+.........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~ 247 (665)
T 1pn0_A 168 RYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDY 247 (665)
T ss_dssp EECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEE
T ss_pred EecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccE
Confidence 3 34 468999999999999999999988754333222
Q ss_pred eEEEeeecCc--cCCC-ccccceeecCceEEEEEecCCCeEEEEEEEcCCCCC----CCCCCChhHHHHHHHHHhcCCCH
Q 015331 180 DIRGCTDFKL--RHGL-EPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQD----KELEGNPDKTKQFVLSKCHDLPE 252 (409)
Q Consensus 180 ~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 252 (409)
.+ ++..... ..+. ...+.+...++..++++|.+++.+.+++.+...... .....+++++.+.+.+.+..+..
T Consensus 248 ~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~ 326 (665)
T 1pn0_A 248 IW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTF 326 (665)
T ss_dssp EE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCC
T ss_pred EE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCcccC
Confidence 22 3332211 1111 111222222455688999999877777666543211 11334566666665555432111
Q ss_pred HHHHHHHcCCCCceeeccccccCchhhhccccC-CCcEEEeccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCC
Q 015331 253 QVKAIVENTPLDSILVSPLRYRYPWEVLWGNIS-KGNVCVAGDAFHPMTPDIGQGGCAALEDGIILARCIAEASTEKPSG 331 (409)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lvGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~ 331 (409)
.+ .....+..+++. ....++|. .+||+|+|||||.++|+.|||||+||+||..|++.|..++++.
T Consensus 327 ~~------~~~~~~~~~~~~-----~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~--- 392 (665)
T 1pn0_A 327 DV------QQLDWFTAYHIG-----QRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGR--- 392 (665)
T ss_dssp EE------EEEEEEEEEEEE-----EEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred ce------eeEEEEEeeecc-----ceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCC---
Confidence 00 000111111111 12345677 7999999999999999999999999999999999999988753
Q ss_pred cccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc
Q 015331 332 VTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY 374 (409)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 374 (409)
..+++|+.|+++|++++.+++..+.....
T Consensus 393 --------------a~~~lL~tYe~eR~p~a~~~i~~s~~~~~ 421 (665)
T 1pn0_A 393 --------------AKRDILKTYEEERQPFAQALIDFDHQFSR 421 (665)
T ss_dssp --------------BCGGGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999998866543
No 14
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=1.7e-39 Score=308.79 Aligned_cols=354 Identities=18% Similarity=0.187 Sum_probs=236.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc--CCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL--RVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~--~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++||+||||||+|+++|+.|+++|++|+|||+.+.+ ....++..+++++.++|+++|+++.+.+...+.....+...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~- 80 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA- 80 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET-
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC-
Confidence 479999999999999999999999999999998753 12233446899999999999999999887777766666543
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeC-CeEEEEE-cCCC--EEecCEEE
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESG-LFKLVNL-ADGA--VFKTKVLI 155 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~-~~~~v~~-~~g~--~~~ad~vV 155 (409)
+ . ...+.+.... .....+.+++..+.+.|.+.+ .+++++++++|++++.++ +.+.|++ .+|+ ++++|+||
T Consensus 81 ~-~-~~~~~~~~~~--~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 81 G-Q-RRRIDLKRLS--GGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIA 156 (394)
T ss_dssp T-E-EEEECHHHHH--TSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEE
T ss_pred C-c-eEEecccccc--CCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEE
Confidence 1 1 1122222111 012344678888888887755 378999999999998763 5677887 6786 79999999
Q ss_pred EcCCCchHhHhHhCCCCC-cccCc--eeEEEeeecCccCCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCC
Q 015331 156 GCDGVNSVVAKWLGFKKP-AFAGR--SDIRGCTDFKLRHGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKEL 232 (409)
Q Consensus 156 ~AdG~~s~vr~~lg~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 232 (409)
+|||.+|.+|+.++.... .+.+. ..+.+...... +..........++.+.++.|.+++...|++....... ..
T Consensus 157 ~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~ 232 (394)
T 1k0i_A 157 GCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTP--PVSHELIYANHPRGFALCSQRSATRSQYYVQVPLSEK--VE 232 (394)
T ss_dssp ECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSC--CSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCC--GG
T ss_pred ECCCCCcHHHHhcCccccccccccccceeEEEecCCC--CCccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCC--cc
Confidence 999999999999876522 12222 22223222111 1111122222344455556666666667666544321 12
Q ss_pred CCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhh
Q 015331 233 EGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALE 312 (409)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~ 312 (409)
..+++.+.+.+.+.+ .......+...........++.. ....+|..+||+|+|||||.++|+.|||+|+||+
T Consensus 233 ~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~ 304 (394)
T 1k0i_A 233 DWSDERFWTELKARL---PSEVAEKLVTGPSLEKSIAPLRS-----FVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAAS 304 (394)
T ss_dssp GCCHHHHHHHHHHTS---CHHHHHHCCCCCEEEEEEEEEEE-----EEEECSEETTEEECGGGTEECCGGGTCHHHHHHH
T ss_pred ccCHHHHHHHHHHhh---CcccccccccCcceeeEEEEhhh-----hhccccccCCEEEEechhhcCCCcccchHHHHHH
Confidence 234455555555543 33222122111110111122211 1234667899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc-------chhHHHHHHHH
Q 015331 313 DGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY-------DGKIINFLRDK 385 (409)
Q Consensus 313 da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~-------~~~~~~~~r~~ 385 (409)
||..|++.|.....+ ..+++|+.|+++|++++..+++.+...+. .+++...+|+.
T Consensus 305 da~~La~~L~~~~~~------------------~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~ 366 (394)
T 1k0i_A 305 DVSTLYRLLLKAYRE------------------GRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQT 366 (394)
T ss_dssp HHHHHHHHHHHHHHH------------------CCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHH
Confidence 999999999987542 23468999999999999999888765432 35788889999
Q ss_pred HHHHHhh
Q 015331 386 IFSVLLG 392 (409)
Q Consensus 386 ~~~~~~~ 392 (409)
.|..+..
T Consensus 367 ~l~~~~~ 373 (394)
T 1k0i_A 367 ELEYYLG 373 (394)
T ss_dssp HHHHHHH
T ss_pred HHHhhcC
Confidence 9886544
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=7.1e-39 Score=321.09 Aligned_cols=343 Identities=17% Similarity=0.173 Sum_probs=232.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHR-LGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~-~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
.++||+||||||+||++|+.|++ +|++|+||||.+.+...+++..++++++++|+++|+.+.+.+.+.+.....++...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 35799999999999999999999 99999999999988888899999999999999999999988877776666665432
Q ss_pred ---CCccccccccccc-CCCCCccccccCHHHHHHHHHhhCC--CC--eEEeCceEEEEEEeCC----eEEEEEc-----
Q 015331 82 ---SCQPASEISFKTK-GNRGGHEVRSVKRSLLMEALERELP--SG--TIRYSSKVVSVEESGL----FKLVNLA----- 144 (409)
Q Consensus 82 ---~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~l~~~~~--~~--~i~~~~~v~~v~~~~~----~~~v~~~----- 144 (409)
.+.......+... ..........+++..+++.|.+.+. ++ +++++++|++++.+++ .++|++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 1211110011110 1111223457899999999988663 34 8999999999998763 5777765
Q ss_pred -CC--CEEecCEEEEcCCCchHhHhHhCCCCCcccCceeEEEeeecC--ccCCCccccceeecCceEEEEEecCCC-eEE
Q 015331 145 -DG--AVFKTKVLIGCDGVNSVVAKWLGFKKPAFAGRSDIRGCTDFK--LRHGLEPKFQQFLGKGFRYGFLPCNDQ-TVY 218 (409)
Q Consensus 145 -~g--~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~ 218 (409)
+| .+++||+||+|||.+|.+|+.+|+..........+ +..... ...+.......+..++.+++++|.+++ .+.
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~r 269 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHLVR 269 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSCEE
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceE-EEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcEEE
Confidence 45 47899999999999999999998875433322222 222211 111100111112225566889999888 555
Q ss_pred EEEEEcC--CCC-CCCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccC----------
Q 015331 219 WFFNWCP--SNQ-DKELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNIS---------- 285 (409)
Q Consensus 219 ~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 285 (409)
+++.+.. +.. ......+++++.+.+.+.+..+...+ .....+..+++.. ...++|.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-----~~a~~~~~~~~~~~~~~ 338 (639)
T 2dkh_A 270 FYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLEV------KNVPWWSVYEIGQ-----RICAKYDDVVDAVATPD 338 (639)
T ss_dssp EEEECC-----------CCCHHHHHHHHHHHHTTSCEEE------EEEEEEEEECCCC-----EECSCSBSCCCSSCCTT
T ss_pred EEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCcc------eeeeEEEeccccc-----chhhhhhcccccccccc
Confidence 5555433 111 11123455555555555443211100 0001111111111 1223444
Q ss_pred --CCcEEEeccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHH
Q 015331 286 --KGNVCVAGDAFHPMTPDIGQGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSC 363 (409)
Q Consensus 286 --~~~v~lvGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~ 363 (409)
.+||+|+|||||.++|+.|||+|+||+||..|++.|..++++. ..+++|+.|+++|++++.
T Consensus 339 ~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~-----------------a~~~lL~~Ye~eR~~~a~ 401 (639)
T 2dkh_A 339 SPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQ-----------------CAPELLHTYSSERQVVAQ 401 (639)
T ss_dssp SCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTS-----------------BCGGGGHHHHHHHHHHHH
T ss_pred CccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCC-----------------CcHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999988752 346789999999999999
Q ss_pred HHHHHhHHhcc
Q 015331 364 ELISMAYIVGY 374 (409)
Q Consensus 364 ~~~~~s~~~~~ 374 (409)
++++.+.....
T Consensus 402 ~~~~~s~~~~~ 412 (639)
T 2dkh_A 402 QLIDFDREWAK 412 (639)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHHHHH
Confidence 99999987765
No 16
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=8.9e-37 Score=290.06 Aligned_cols=324 Identities=15% Similarity=0.165 Sum_probs=211.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCC-cceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRV-TGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++|||+|||||||||++|+.|+++|++|+||||.+.+.. ..++..+++ ..++++++.........++.+..++.+.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~---~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCH---HHHHHcCCCchhhhhhcccceEEEEeCC
Confidence 469999999999999999999999999999999887643 345666665 4677777765443344455566665543
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEE-E-cCC--CEEecCEEE
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVN-L-ADG--AVFKTKVLI 155 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~-~-~~g--~~~~ad~vV 155 (409)
.... ...... .......+.++|..+.+.|.+.+. +++++++++|+++..+++.+... . .++ .+++||+||
T Consensus 80 ~~~~-~~~~~~---~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vI 155 (397)
T 3oz2_A 80 EKRP-IILQSE---KAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVI 155 (397)
T ss_dssp CSSC-EEEECS---SSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEE
T ss_pred CceE-eecccc---ccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEE
Confidence 3221 111111 112334567999999999988663 78999999999999888775432 2 233 268999999
Q ss_pred EcCCCchHhHhHhCCCCCcccCceeEEE-eeecCccCCCccccc-ee---ecCceEEEEEecCCCeEEEEEEEcCCCCCC
Q 015331 156 GCDGVNSVVAKWLGFKKPAFAGRSDIRG-CTDFKLRHGLEPKFQ-QF---LGKGFRYGFLPCNDQTVYWFFNWCPSNQDK 230 (409)
Q Consensus 156 ~AdG~~s~vr~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 230 (409)
+|||.+|.+|+.++.............. ....... ...+... .+ ..++.+.+++|.+++...+.+....+..
T Consensus 156 gAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~-- 232 (397)
T 3oz2_A 156 AADGFESEFGRWAGLKSVILARNDIISALQYRMINV-DVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI-- 232 (397)
T ss_dssp ECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESC-CCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTS--
T ss_pred eCCccccHHHHHcCCCcccccceeeeeeEEEEeecc-ccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchh--
Confidence 9999999999999876543322221111 1111111 1122222 22 2456778899999987666555544322
Q ss_pred CCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhH
Q 015331 231 ELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAA 310 (409)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~a 310 (409)
.......+.+.+.+.. .+.+. ...........++. ......+..+|++++|||||.++|++|||+|+|
T Consensus 233 ---~~~~~~~~~l~~~~~~-~~~l~----~~~~~~~~~~~~~~----~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A 300 (397)
T 3oz2_A 233 ---HNRFELKNYLDRFIEN-HPGLK----KGQDIQLVTGGVSV----SKVKMPITMPGLMLVGDAARLIDPITGGGIANA 300 (397)
T ss_dssp ---CSHHHHHHHHHHHHHT-CHHHH----TSEEEEEEEEEEEC----CCCCSCCEETTEEECGGGGTCSCTTTCCCHHHH
T ss_pred ---hhhhhHHHHHHHHHHh-Ccccc----ccceeeeeeccccc----cCcccceeeeeEEEcccccccCCCCcchhHHHH
Confidence 1233333433333322 22221 11111111122221 112235567899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHH
Q 015331 311 LEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCE 364 (409)
Q Consensus 311 l~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~ 364 (409)
|+||..||+.|.+++..+ +..+++|++|++.++++...
T Consensus 301 ~~~g~~~A~~i~~~l~~~----------------~~~~~~L~~Ye~~~~~~~~~ 338 (397)
T 3oz2_A 301 IVSGMYAAQVTKEAIESN----------------DYSPQMMQKYEKLIKERFER 338 (397)
T ss_dssp HHHHHHHHHHHHHHHHHT----------------CCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----------------CccHHHHHHHHHHHHHHHHH
Confidence 999999999999988752 35678999999988876543
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=1.5e-36 Score=297.39 Aligned_cols=345 Identities=14% Similarity=0.115 Sum_probs=234.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHH-HHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWR-ALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~-~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
++||+||||||+|+++|+.|+++|++|+|||+.+.+.. +.+..+.+.... +++.+|+++.+.....+......+.+..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~-~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRH-QIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCC-CSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCC-CCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 47999999999999999999999999999999875543 345666676554 8899999988877665554443333322
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCe---EEEEEcCCC--EEecCEEE
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLF---KLVNLADGA--VFKTKVLI 155 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~---~~v~~~~g~--~~~ad~vV 155 (409)
......+.+...........+.++|..|.+.|.+.+ .+++++++++|+++..+++. +++...+|+ +++||+||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI 165 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIV 165 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEE
Confidence 211111222222122233456799999999998866 47899999999999998875 445556674 79999999
Q ss_pred EcCCCchHhHhHhCCCCC-cccCceeEEEeeecCcc--CCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCC
Q 015331 156 GCDGVNSVVAKWLGFKKP-AFAGRSDIRGCTDFKLR--HGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKEL 232 (409)
Q Consensus 156 ~AdG~~s~vr~~lg~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 232 (409)
+|||.+|.+|+.++.... .+....++.+++..... .+..........++.+++++|+.++...+.+.+..+.... .
T Consensus 166 ~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~-~ 244 (512)
T 3e1t_A 166 DASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEA-I 244 (512)
T ss_dssp ECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTT-T
T ss_pred ECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhh-h
Confidence 999999999999976432 22344555555442211 1111222333445667899999999877776664332211 1
Q ss_pred CCChhHHHHHHHHHhcCCCHHHHHHHHcCCCC-ceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHh
Q 015331 233 EGNPDKTKQFVLSKCHDLPEQVKAIVENTPLD-SILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAAL 311 (409)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al 311 (409)
..+++ +.+.+.+ ...+.+.+.+...... ......+.....+.+...++..+|++++|||||+++|++|||+|+|+
T Consensus 245 ~~~~~---~~~~~~l-~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al 320 (512)
T 3e1t_A 245 KDGHE---AALLRYI-DRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLAT 320 (512)
T ss_dssp SSCHH---HHHHHHH-HTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHH
T ss_pred cCCHH---HHHHHHH-HhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHH
Confidence 22232 2233333 3556666666543211 11111222222222334567789999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhH
Q 015331 312 EDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAY 370 (409)
Q Consensus 312 ~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~ 370 (409)
+||..|++.|...+.+ ....+.+|+.|+++|+++...+.++..
T Consensus 321 ~dA~~La~~L~~~l~~----------------~~~~~~aL~~Ye~~~~~~~~~~~~~~~ 363 (512)
T 3e1t_A 321 YSALLVARAINTCLAG----------------EMSEQRCFEEFERRYRREYGNFYQFLV 363 (512)
T ss_dssp HHHHHHHHHHHHHTTT----------------CSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC----------------CccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998765 236778999999999999988888763
No 18
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=1.2e-35 Score=293.36 Aligned_cols=346 Identities=16% Similarity=0.098 Sum_probs=232.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++++||+||||||+|+++|+.|+++|++|+|||+.+.+.. +.+..+.+.+..+++.+|+++.+..............+
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~-~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 98 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY-RVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLW 98 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC-CCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEEC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC-ceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEe
Confidence 34578999999999999999999999999999999876543 45788999999999999999888776544332222222
Q ss_pred cCCcccccccccccCC--CCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEe-CCeEEEEEc-CC--CEEecC
Q 015331 81 VSCQPASEISFKTKGN--RGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEES-GLFKLVNLA-DG--AVFKTK 152 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~-~~~~~v~~~-~g--~~~~ad 152 (409)
........+.+..... ......+.+++..+.+.|.+.+ .+++++++++|++++.+ ++.+.|++. +| .+++||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~Ad 178 (591)
T 3i3l_A 99 GQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESD 178 (591)
T ss_dssp SSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEES
T ss_pred cCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcC
Confidence 2222111222221111 0122345789999999998766 47899999999999875 566788887 66 479999
Q ss_pred EEEEcCCCchHhHhHhCCCCCcc-cCceeEEEeeecCcc--CCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCC
Q 015331 153 VLIGCDGVNSVVAKWLGFKKPAF-AGRSDIRGCTDFKLR--HGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQD 229 (409)
Q Consensus 153 ~vV~AdG~~s~vr~~lg~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 229 (409)
+||+|||.+|.+|+.++...... ....++...+..... .+..........++.+++++|..++.+.+.+....+...
T Consensus 179 lVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~ 258 (591)
T 3i3l_A 179 FVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSA 258 (591)
T ss_dssp EEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHH
T ss_pred EEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHh
Confidence 99999999999999998764322 222333333322111 112222233344666789999999876666555433211
Q ss_pred CCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhh
Q 015331 230 KELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCA 309 (409)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~ 309 (409)
.....++ +.+.+.+....+.+.+.+....... .......+.....++..++++++|||||+++|+.|||+|+
T Consensus 259 ~l~~~~~----~~~~~~l~~~~p~l~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinl 330 (591)
T 3i3l_A 259 EVREQGA----DAFYSSTLAKCAKAMDILGGAEQVD----EVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHL 330 (591)
T ss_dssp HHHHHCH----HHHHHHHHTTCHHHHHHHTTCEECS----CCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHH
T ss_pred hhccCCH----HHHHHHHHHhCHHHHHHHhcCcccc----CceEecccccchhhcccCCEEEEccccccCCCcccccHHH
Confidence 0001112 2333333355566666665432110 0111111222334667899999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHH
Q 015331 310 ALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYI 371 (409)
Q Consensus 310 al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~ 371 (409)
|++||..|++.|...+.+ .+..+.+++.|++.++++...+.++...
T Consensus 331 Al~dA~~LA~~L~~~l~~----------------~~~~~~al~~Y~~~~~~~~~~i~~~~~~ 376 (591)
T 3i3l_A 331 ASQSAVSAAAAIDRITRH----------------GDEKDAVHAWYNRTYREAYEQYHQFLAS 376 (591)
T ss_dssp HHHHHHHHHHHHHHHHHC----------------GGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC----------------CchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998764 2456789999999999999888877633
No 19
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=5e-35 Score=278.27 Aligned_cols=333 Identities=14% Similarity=0.098 Sum_probs=219.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCC-cceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRV-TGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
+++||+||||||+|+++|+.|+++|++|+|+|+.+.+.. ..++..++ .+.++++|+++........+.+..+....
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS---KGILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE---THHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccC---HHHHHHcCCCCChHHhhhhcceEEEEcCC
Confidence 468999999999999999999999999999999986543 34444444 36788888876543344455555555443
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEE-EEEc---CCCEEecCEEE
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKL-VNLA---DGAVFKTKVLI 155 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~-v~~~---~g~~~~ad~vV 155 (409)
. .....+..... .....+.++|..|.+.|.+.+. +++++++++|++++.+++.++ |++. ++.+++||+||
T Consensus 80 ~-~~~~~~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV 155 (397)
T 3cgv_A 80 E-KRPIILQSEKA---GNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVI 155 (397)
T ss_dssp C-SSCEEEC--------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEE
T ss_pred C-CEEEEEecccc---CCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEE
Confidence 2 11112222111 1224567999999999988663 789999999999999888876 7763 45589999999
Q ss_pred EcCCCchHhHhHhCCCC-CcccCceeEEEeeecCccCCCccccceee---cCceEEEEEecCCCeEEEEEEEcCCCCCCC
Q 015331 156 GCDGVNSVVAKWLGFKK-PAFAGRSDIRGCTDFKLRHGLEPKFQQFL---GKGFRYGFLPCNDQTVYWFFNWCPSNQDKE 231 (409)
Q Consensus 156 ~AdG~~s~vr~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 231 (409)
+|||.+|.+++.++... ...........................++ .++.+.+++|.+++...+.+....+..
T Consensus 156 ~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~--- 232 (397)
T 3cgv_A 156 AADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--- 232 (397)
T ss_dssp ECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC---
T ss_pred ECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc---
Confidence 99999999999998776 32222222111111111111112222332 466789999999998777666654432
Q ss_pred CCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHh
Q 015331 232 LEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAAL 311 (409)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al 311 (409)
.......+.+.+.+... +.+ ............++.. ....++..++++++|||||.++|++|||+++|+
T Consensus 233 --~~~~~~~~~l~~~~~~~-~~~----~~~~~~~~~~~~~p~~----~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~ 301 (397)
T 3cgv_A 233 --HNRFELKNYLDRFIENH-PGL----KKGQDIQLVTGGVSVS----KVKMPITMPGLMLVGDAARLIDPITGGGIANAI 301 (397)
T ss_dssp --SCHHHHHHHHHHHHHTC-HHH----HTSEEEEEEEEEEECC----CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHH
T ss_pred --cCCCCHHHHHHHHHHhC-cCC----CCCeEEeeeeeeeecC----CCccceeeCCEEEEEccccCCCCCCCCCHHHHH
Confidence 12233334444443333 221 1111111111112211 123366789999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHh
Q 015331 312 EDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIV 372 (409)
Q Consensus 312 ~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~ 372 (409)
+||..|++.|.+.+... +..+.+|++|+++|+++....+..+...
T Consensus 302 ~~a~~la~~l~~~~~~~----------------~~~~~~l~~Y~~~~~~~~~~~~~~~~~~ 346 (397)
T 3cgv_A 302 VSGMYAAQVTKEAIESN----------------DYSPQMMQKYEKLIKERFERKHLRNWVA 346 (397)
T ss_dssp HHHHHHHHHHHHHHHHT----------------CCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC----------------CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999877431 2457899999999999887777766544
No 20
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=4.5e-35 Score=280.81 Aligned_cols=313 Identities=16% Similarity=0.219 Sum_probs=210.9
Q ss_pred CCC-CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhccccc-CeEEE
Q 015331 1 MEE-DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQ-GMVVA 78 (409)
Q Consensus 1 M~~-~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-~~~~~ 78 (409)
|++ ++||+||||||+|+++|+.|+++|++|+|+|+.+.++. +.|..+.+.+...++++|+++.+.+.+.... +..+.
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~-~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 79 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRF-VIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFV 79 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCC-CSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC-cccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEE
Confidence 543 48999999999999999999999999999999976553 5678889999999999999988877654433 33332
Q ss_pred eccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeE--EEEEcCCC--EEecC
Q 015331 79 SSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFK--LVNLADGA--VFKTK 152 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~--~v~~~~g~--~~~ad 152 (409)
.. .....+.+...........+.++|..+.+.|.+.+. +++++++++|++++.+++.+ .|.+.+|+ +++||
T Consensus 80 ~~---~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~ 156 (421)
T 3nix_A 80 RG---KEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEAR 156 (421)
T ss_dssp ET---TEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEE
T ss_pred eC---CeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcC
Confidence 21 112233333222222334567999999999988663 78999999999999887765 45567787 69999
Q ss_pred EEEEcCCCchHhHhHhCCCCCcc-cCceeEEEeeecCccC-CCc-cccceee---cCceEEEEEecCCCeEEEEEEEcCC
Q 015331 153 VLIGCDGVNSVVAKWLGFKKPAF-AGRSDIRGCTDFKLRH-GLE-PKFQQFL---GKGFRYGFLPCNDQTVYWFFNWCPS 226 (409)
Q Consensus 153 ~vV~AdG~~s~vr~~lg~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~ 226 (409)
+||+|||.+|.+++.++...+.. ....++.......... ... ....... .++.+++++|.++++..+.+....+
T Consensus 157 ~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~ 236 (421)
T 3nix_A 157 FIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPS 236 (421)
T ss_dssp EEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHH
T ss_pred EEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHH
Confidence 99999999999999998765433 3334444333322111 111 1112222 3566789999999987777665433
Q ss_pred CCCCCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCC-ceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcc
Q 015331 227 NQDKELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLD-SILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQ 305 (409)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~ 305 (409)
.... ...++++..+.+.+ ..+.+.+.+...... .+...+. ......++..++++++|||||+++|++|+
T Consensus 237 ~~~~-~~~~~~~~l~~~~~----~~p~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~lvGDAa~~~~P~~G~ 306 (421)
T 3nix_A 237 YFDE-YTGTPEERMRAMIA----NEGHIAERFKSEEFLFEPRTIEG-----YAISASKLYGDGFVLTGNATEFLDPIFSS 306 (421)
T ss_dssp HHTT-SCSCHHHHHHHHHH----TCTTTHHHHTTCCBSSCCEEEEC-----CCBEESCSEETTEEECGGGTCBCCSTTCC
T ss_pred Hhhh-cCCCHHHHHHHHHH----hCcHHHHHHhcCccccCceeecc-----cceeeeeeccCCEEEecccccccCCcccc
Confidence 2211 12234333333332 334444555543221 1112211 11223356779999999999999999999
Q ss_pred hhhhHhhHHHHHHHHHHHHhcC
Q 015331 306 GGCAALEDGIILARCIAEASTE 327 (409)
Q Consensus 306 G~~~al~da~~La~~l~~~~~~ 327 (409)
|+++|++||..|++.|.+.+.+
T Consensus 307 G~~~A~~~a~~la~~l~~~~~~ 328 (421)
T 3nix_A 307 GATFAMESGSKGGKLAVQFLKG 328 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998765
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.1e-35 Score=287.25 Aligned_cols=326 Identities=16% Similarity=0.106 Sum_probs=212.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC--CcceeEEechhHHHHHHHcCCchHHHh-hcccccCeEEE
Q 015331 2 EEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR--VTGFAITLWTNAWRALDAVGISDSLRQ-QHIQLQGMVVA 78 (409)
Q Consensus 2 ~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~-~~~~~~~~~~~ 78 (409)
+.++||+||||||+|+++|+.|+++|++|+|+|+.+.+. ...++..+ +.+.++++|+.+.... ......+..++
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 80 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLY 80 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEE
Confidence 446899999999999999999999999999999987643 23344444 4678888887654322 12223333443
Q ss_pred eccCCcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEE-EEEc---CCC--EEe
Q 015331 79 SSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKL-VNLA---DGA--VFK 150 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~-v~~~---~g~--~~~ 150 (409)
... +. ..+.++ ...+.++|..|.+.|.+.+ .+++++++++|+++..+++.+. |++. +|+ +++
T Consensus 81 ~~~-~~--~~~~~~-------~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ 150 (453)
T 3atr_A 81 SPD-MQ--TVWTVN-------GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVY 150 (453)
T ss_dssp CTT-SS--CEEEEE-------EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred CCC-Cc--eEEeEC-------CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEE
Confidence 221 11 111111 1235789999999998866 3789999999999998887754 5554 665 799
Q ss_pred cCEEEEcCCCchHhHhHhCCCCC----cc--cCceeEEEeeecCccCCCcccc-ceee----cCceEEEEEecCCCeEEE
Q 015331 151 TKVLIGCDGVNSVVAKWLGFKKP----AF--AGRSDIRGCTDFKLRHGLEPKF-QQFL----GKGFRYGFLPCNDQTVYW 219 (409)
Q Consensus 151 ad~vV~AdG~~s~vr~~lg~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~p~~~~~~~~ 219 (409)
||+||+|||.+|.+|+.++...+ .+ ....++...+....... ++.+ ..++ .++.+++++|.+++...+
T Consensus 151 ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~v 229 (453)
T 3atr_A 151 SKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIE-DHDYLRIFIDQETSPGGYWWYFPKGKNKVNV 229 (453)
T ss_dssp CSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCT-TTTEEEEECCTTTSTTSCEEEEEEETTEEEE
T ss_pred cCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCcc-CCCeEEEEECCCCCCCcEEEEEECCCCeEEE
Confidence 99999999999999999987542 11 12344444444333221 2222 2333 245678999999997777
Q ss_pred EEEEcCCCCCCCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCC
Q 015331 220 FFNWCPSNQDKELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPM 299 (409)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~ 299 (409)
.+.+..... .....+.+.+.+.+....+... .........++ .....++|..+|++++|||||.+
T Consensus 230 g~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~p----~~~~~~~~~~~~v~lvGDAAh~~ 294 (453)
T 3atr_A 230 GLGIQGGMG---YPSIHEYYKKYLDKYAPDVDKS--------KLLVKGGALVP----TRRPLYTMAWNGIIVIGDSGFTV 294 (453)
T ss_dssp EEEEESSSC---CCCHHHHHHHHHHHHCTTEEEE--------EEEEEEEEEEE----CSSCCSCSEETTEEECGGGGTCS
T ss_pred EEEecCCCC---CCCHHHHHHHHHHhhhhhcCCC--------eEEeccceecc----CCCCCCceecCCEEEEeCcccCC
Confidence 666543321 1111223333322211111110 00011011111 12223467789999999999999
Q ss_pred CCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHh
Q 015331 300 TPDIGQGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIV 372 (409)
Q Consensus 300 ~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~ 372 (409)
+|++|||+|+|++||..|++.|.+++... +..+++|+.|+++|+++....+..+...
T Consensus 295 ~P~~G~G~~~Ai~da~~la~~l~~~l~~~----------------~~~~~~L~~Y~~~r~~~~~~~~~~~~~~ 351 (453)
T 3atr_A 295 NPVHGGGKGSAMISGYCAAKAILSAFETG----------------DFSASGLWDMNICYVNEYGAKQASLDIF 351 (453)
T ss_dssp CTTTCCCHHHHHHHHHHHHHHHHHHHHHT----------------CCSTTTTTHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHHHHHHHHHHHcC----------------CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999876531 1235789999999999998887766444
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=8.3e-36 Score=281.86 Aligned_cols=331 Identities=15% Similarity=0.104 Sum_probs=208.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCc-hH-HHhhcccccCeEEEec
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGIS-DS-LRQQHIQLQGMVVASS 80 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~-~~~~~~~~~~~~~~~~ 80 (409)
+||+||||||+|+++|+.|+++ |++|+|+|+.+.+...++++.+++++.+.+...++. +. +.....+.....+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 4899999999999999999999 999999999988877788999998877622222333 33 333333444444443
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
.+... .. ..+.....++|..|.+.|.+.+. +++++++++|++++.. .++++|+||+||
T Consensus 80 -~g~~~-----~~---~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~Ad 139 (381)
T 3c4a_A 80 -HNEPS-----LM---STGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLAN 139 (381)
T ss_dssp -SSSEE-----EC---CCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECC
T ss_pred -CCeeE-----Ee---cCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECC
Confidence 22221 10 00122347899999999988763 6899999999887532 136899999999
Q ss_pred CCchHhHhHh----CCCCCcccCceeEEEeeecCccCCCccccceeecCceE-EEEEecCCCeEEEEEEEcCCCC--CCC
Q 015331 159 GVNSVVAKWL----GFKKPAFAGRSDIRGCTDFKLRHGLEPKFQQFLGKGFR-YGFLPCNDQTVYWFFNWCPSNQ--DKE 231 (409)
Q Consensus 159 G~~s~vr~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~--~~~ 231 (409)
|.+|. |+.+ +.......+...+.+..... .. ...+..+.+.+.. +.++|.+++...+.+....+.. ...
T Consensus 140 G~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (381)
T 3c4a_A 140 GVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF--DQ-MNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARL 215 (381)
T ss_dssp GGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC--SS-EEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTS
T ss_pred CCCch-HHhhhhhcCCCcccCCccEEEEecCCCC--Cc-ceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCc
Confidence 99999 9887 33322222333443332211 11 1111112234432 3469998887544443321100 011
Q ss_pred CCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHh
Q 015331 232 LEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAAL 311 (409)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al 311 (409)
...+++...+.+.+.+..+.+.. +++... . ..++..... ..++|..+||+|+|||||.++|+.|||+|+||
T Consensus 216 ~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~---~-~~~~~~~~~----~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al 286 (381)
T 3c4a_A 216 GEMSEEASAEYVAKVFQAELGGH-GLVSQP---G-LGWRNFMTL----SHDRCHDGKLVLLGDALQSGHFSIGHGTTMAV 286 (381)
T ss_dssp SSSCHHHHHHHHHHHTHHHHTTC-CCBCCT---T-TCSEEEEEC----CCSCSEETTEEECGGGTCCCCGGGCCHHHHHH
T ss_pred ccCChHHHHHHHHHHhcccCCCc-hhhcCC---C-cceeeeccc----cCCCcccCCEEEEEccccccCCCccccHHHHH
Confidence 22345566666666665332211 111111 0 012221111 23467789999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhHHhcc---------chhHHHHH
Q 015331 312 EDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAYIVGY---------DGKIINFL 382 (409)
Q Consensus 312 ~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~---------~~~~~~~~ 382 (409)
+||..|++.|... .+.+++|+.|+++|++++..++..+..+.. .......+
T Consensus 287 ~Da~~La~~L~~~--------------------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 346 (381)
T 3c4a_A 287 VVAQLLVKALCTE--------------------DGVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFV 346 (381)
T ss_dssp HHHHHHHHHHHHS--------------------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC------CHH
T ss_pred HHHHHHHHHHhcc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhcCCHHHHH
Confidence 9999999999873 156899999999999999999999877652 22344455
Q ss_pred HHHHHHH
Q 015331 383 RDKIFSV 389 (409)
Q Consensus 383 r~~~~~~ 389 (409)
|+.+++.
T Consensus 347 r~~~~~~ 353 (381)
T 3c4a_A 347 QSFDARR 353 (381)
T ss_dssp HHGGGTT
T ss_pred HHHhhcc
Confidence 6665553
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=6.5e-31 Score=258.29 Aligned_cols=327 Identities=12% Similarity=0.051 Sum_probs=211.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH------------cCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchH--HHhh
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHR------------LGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDS--LRQQ 68 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~------------~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~--~~~~ 68 (409)
..+||+||||||+|+++|..|++ .|++|+|||+.+.++ .+.+..+.+++..+|+.+|+.+. +.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~-~g~g~~~~p~~~~~l~~lGi~e~~~~~~~ 84 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT-IGVGEGTWPSMRSTLSKIGIDENDFIRQC 84 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC-CCSCEECCTHHHHHHHHHTCCHHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC-cceeeechHhHHHHHHHcCCCHHHHHHHc
Confidence 46899999999999999999999 899999999876544 34588899999999999999986 5554
Q ss_pred ccc-ccCeEEEeccC------Cc----------ccccccccc-------c-------------------------CC--C
Q 015331 69 HIQ-LQGMVVASSVS------CQ----------PASEISFKT-------K-------------------------GN--R 97 (409)
Q Consensus 69 ~~~-~~~~~~~~~~~------~~----------~~~~~~~~~-------~-------------------------~~--~ 97 (409)
... ..++.+..+.. +. ......+.. . .. .
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~ 164 (526)
T 2pyx_A 85 DASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHF 164 (526)
T ss_dssp TCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCC
T ss_pred CCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCC
Confidence 332 22333322211 00 000001100 0 00 0
Q ss_pred CCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeCCe--EEEEEcCCCEEecCEEEEcCCCchHh-HhHhCCC
Q 015331 98 GGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESGLF--KLVNLADGAVFKTKVLIGCDGVNSVV-AKWLGFK 171 (409)
Q Consensus 98 ~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~~~--~~v~~~~g~~~~ad~vV~AdG~~s~v-r~~lg~~ 171 (409)
.....+.++|..|.+.|.+.+ .+++++++ +|++++.++++ +.|++.+|.+++||+||+|||.+|.+ ++.++..
T Consensus 165 ~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~ 243 (526)
T 2pyx_A 165 QNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVP 243 (526)
T ss_dssp SSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCC
T ss_pred CCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 111235789999999998765 36899999 69999887543 46778887789999999999999999 6777765
Q ss_pred CCccc----CceeEEEeeecCcc-CCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCCCCChhHHHHHHHHH
Q 015331 172 KPAFA----GRSDIRGCTDFKLR-HGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKELEGNPDKTKQFVLSK 246 (409)
Q Consensus 172 ~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (409)
...+. ....+......... ....+.......+..+++++|..++.. ..+.+.... .+.+...+.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~-~~~v~~~~~------~~~~~~~~~l~~~ 316 (526)
T 2pyx_A 244 FLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKG-VGYVYSSSH------TNDIDAQKTLFNY 316 (526)
T ss_dssp EEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEE-EEEEECTTT------CCHHHHHHHHHHH
T ss_pred cccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceE-EEEEecCCC------CChHHHHHHHHHH
Confidence 42211 11222222222211 111222222233455788999987533 333333221 1234556667777
Q ss_pred hcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhc
Q 015331 247 CHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALEDGIILARCIAEAST 326 (409)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~ 326 (409)
+..+.+.+ ..... ..+++... ...++..+|++++|||||+++|+.|||+|+|++||..|++.|...
T Consensus 317 l~~~~~~l----~~~~~---~~~~~~~~-----~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~-- 382 (526)
T 2pyx_A 317 LGVDGAAA----DKLEP---RQLAINPG-----YRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN-- 382 (526)
T ss_dssp HTCCHHHH----HHCCC---EEEECCCE-----EESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC--
T ss_pred HHhcCccc----ccCCc---eEEecccC-----ccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc--
Confidence 75553332 21211 12222211 123556799999999999999999999999999999999877531
Q ss_pred CCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHh
Q 015331 327 EKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMA 369 (409)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s 369 (409)
....+.++++|+++|+++...+.++.
T Consensus 383 -----------------~~~~~~~l~~Y~~~~~~~~~~~~~~~ 408 (526)
T 2pyx_A 383 -----------------RMVMDTISARVNERYQQHWQQIIDFL 408 (526)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12567899999999999988876654
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=1.2e-30 Score=258.53 Aligned_cols=340 Identities=14% Similarity=0.057 Sum_probs=205.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc------CCceEEEeCCCccCCc-ceeEEechhHHHHHHHcCCchHHHhhcccccC--
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL------GIRSLVLESSESLRVT-GFAITLWTNAWRALDAVGISDSLRQQHIQLQG-- 74 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~------g~~V~v~E~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-- 74 (409)
++||+||||||+||++|+.|+++ |++|+||||.+.++.. .++..+.+++++.| + +.+...+.++..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l---~~~~~~g~~~~~~~ 109 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--F---PDWKEKGAPLNTPV 109 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--C---TTHHHHTCCCCEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--H---HHHHhcCCceeeee
Confidence 47999999999999999999999 9999999999876542 45666787776654 2 233333333221
Q ss_pred --eEEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCC-eEE-EEEc----
Q 015331 75 --MVVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGL-FKL-VNLA---- 144 (409)
Q Consensus 75 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~-~~~-v~~~---- 144 (409)
..+........ ..++............+.++|..|.+.|.+.+. +++++++++|+++..+++ .+. |.+.
T Consensus 110 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~ 188 (584)
T 2gmh_A 110 TEDRFGILTEKYR-IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGI 188 (584)
T ss_dssp CEEEEEEECSSCE-EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEE
T ss_pred chhheeeeccCCC-ccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccc
Confidence 11111111100 111110000011122457899999999988663 789999999999988764 343 7665
Q ss_pred --CC---------CEEecCEEEEcCCCchHhHhHh----CCCCCcccCce--eEEEeeecCccCCCccccceeec-----
Q 015331 145 --DG---------AVFKTKVLIGCDGVNSVVAKWL----GFKKPAFAGRS--DIRGCTDFKLRHGLEPKFQQFLG----- 202 (409)
Q Consensus 145 --~g---------~~~~ad~vV~AdG~~s~vr~~l----g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----- 202 (409)
+| .+++||+||+|||.+|.+|+.+ ++.....+... .+...+..+..........++++
T Consensus 189 ~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~ 268 (584)
T 2gmh_A 189 QKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDR 268 (584)
T ss_dssp CTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCT
T ss_pred cCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccccC
Confidence 23 5799999999999999998876 55432222211 22222233322111111122211
Q ss_pred -CceEEEEEecC--CCeEEEEEEEcCCCCCCCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCCceeeccccccCchhh
Q 015331 203 -KGFRYGFLPCN--DQTVYWFFNWCPSNQDKELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEV 279 (409)
Q Consensus 203 -~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (409)
.....+++|.. ++.+.+.+....+.... ..++ .+.+.+.. . ++.+.++++......+....+.. ... .
T Consensus 269 ~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~---~~~l~~~~-~-~p~i~~~l~~~~~~~~~~~~~~~-~~~-~ 339 (584)
T 2gmh_A 269 HTYGGSFLYHLNEGEPLLALGFVVGLDYQNP--YLSP---FREFQRWK-H-HPSIKPTLEGGKRIAYGARALNE-GGF-Q 339 (584)
T ss_dssp TSCEEEEEEECCSSSCEEEEEEEEETTCCCT--TCCH---HHHHHHHT-T-STTTHHHHTTCEEEEEEEEEEEC-CGG-G
T ss_pred CcCCceEEEEecCCCCeEEEEEEEecCcccc--cCCh---HHHHHHHH-h-ChHHHHHhCCCeEEEecceEccC-CCc-c
Confidence 11224567877 67776666655433211 1122 23344333 2 45566666543211111111110 001 1
Q ss_pred hccccCCCcEEEeccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhc-hHHHH---HHHHH
Q 015331 280 LWGNISKGNVCVAGDAFHPMTPDIGQGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFK-RNEIG---LKRYA 355 (409)
Q Consensus 280 ~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---l~~y~ 355 (409)
...+|..+|++|+|||||+++|+.|||+|+||+||..||+.|..++... + ..+++ |+.|+
T Consensus 340 ~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g----------------~~~~~~a~~~L~~Ye 403 (584)
T 2gmh_A 340 SIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSE----------------NLQSKTIGLHVTEYE 403 (584)
T ss_dssp GCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCC----------------CCCCSSSSCCCTHHH
T ss_pred cCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcC----------------CcchhhhhhhHHHHH
Confidence 2346778999999999999999999999999999999999999987531 0 12343 89999
Q ss_pred HHhhhh-HHHHHHHhHHhcc
Q 015331 356 TERRWR-SCELISMAYIVGY 374 (409)
Q Consensus 356 ~~r~~~-~~~~~~~s~~~~~ 374 (409)
++|+++ +.+.+..++....
T Consensus 404 ~~r~~~~v~~~l~~~r~~~~ 423 (584)
T 2gmh_A 404 DNLKNSWVWKELYSVRNIRP 423 (584)
T ss_dssp HHHHTSHHHHHHHHTTTTTG
T ss_pred HHHHHhHHHHHHHHHhChhH
Confidence 999987 6776666655533
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.97 E-value=3.6e-30 Score=252.59 Aligned_cols=322 Identities=12% Similarity=0.026 Sum_probs=202.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---cCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchH--HHhhccccc-CeEE
Q 015331 4 DEDIVIVGAGIAGLTTSLALHR---LGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDS--LRQQHIQLQ-GMVV 77 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~--~~~~~~~~~-~~~~ 77 (409)
.+||+|||||++|+++|+.|++ +|++|+|||+.+.+ ..+.+..+.+....+++.+|+.+. +.......+ ++.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~-~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVR-RIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCC-ceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 3699999999999999999999 99999999998643 345677788889999999999875 444332221 2222
Q ss_pred EeccC---------C-------ccc--------c-ccc---------------c-------ccc----C---------CC
Q 015331 78 ASSVS---------C-------QPA--------S-EIS---------------F-------KTK----G---------NR 97 (409)
Q Consensus 78 ~~~~~---------~-------~~~--------~-~~~---------------~-------~~~----~---------~~ 97 (409)
..+.. + ... . ... . ... . ..
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 21110 0 000 0 000 0 000 0 00
Q ss_pred C--CccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCe--EEEEEcCCCEEecCEEEEcCCCchHhH-hHhCC
Q 015331 98 G--GHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLF--KLVNLADGAVFKTKVLIGCDGVNSVVA-KWLGF 170 (409)
Q Consensus 98 ~--~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~--~~v~~~~g~~~~ad~vV~AdG~~s~vr-~~lg~ 170 (409)
. ....+.++|..+.+.|.+.+ .+++++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.++ +.++.
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~ 239 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGG 239 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCC
Confidence 0 12345789999999998866 37899999 99999886544 678888888899999999999999984 55666
Q ss_pred CCCc----ccCceeEEEeeecCccCCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCCCCChhHHHHHHHHH
Q 015331 171 KKPA----FAGRSDIRGCTDFKLRHGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKELEGNPDKTKQFVLSK 246 (409)
Q Consensus 171 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (409)
.... ......+.............+.......++.+++++|..+. ..+.+.+... ..++++..+.+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~-~~~g~~~~~~------~~~~~~~~~~l~~~ 312 (511)
T 2weu_A 240 RFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFKR-DGNGYVYSDE------FISPEEAERELRST 312 (511)
T ss_dssp CEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSSE-EEEEEEECTT------TSCHHHHHHHHHHH
T ss_pred CCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCCc-eEEEEEECCC------CCCHHHHHHHHHHH
Confidence 5321 11222222222222211012222233445567899999873 4444444321 12345555666665
Q ss_pred hcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhc
Q 015331 247 CHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALEDGIILARCIAEAST 326 (409)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~ 326 (409)
+.. .+.+ ......++... ...++..+|++++|||||+++|+.|+|+|+|++||..|++.|..
T Consensus 313 ~~~-~~~~---------~~~~~~~~~~~-----~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~--- 374 (511)
T 2weu_A 313 VAP-GRDD---------LEANHIQMRIG-----RNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG--- 374 (511)
T ss_dssp HCT-TCTT---------SCCEEEECCCE-----EESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC---
T ss_pred hCc-cccc---------ccceeEEeecc-----ccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc---
Confidence 532 1111 11111121111 12345579999999999999999999999999999999998763
Q ss_pred CCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHh
Q 015331 327 EKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMA 369 (409)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s 369 (409)
+ +..+.+++.|+++|+++...+.++.
T Consensus 375 ~-----------------~~~~~~l~~Y~~~~~~~~~~~~~~~ 400 (511)
T 2weu_A 375 E-----------------RWDPVLISAYNERMAHMVDGVKEFL 400 (511)
T ss_dssp T-----------------TCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----------------CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1456899999999999888777654
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.97 E-value=7.1e-30 Score=251.70 Aligned_cols=323 Identities=14% Similarity=0.067 Sum_probs=204.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHH---cCCceEEEeCCCccCCcceeEEechhHHH-HHHHcCCchH--HHhhccccc-
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHR---LGIRSLVLESSESLRVTGFAITLWTNAWR-ALDAVGISDS--LRQQHIQLQ- 73 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~~~~~~~~~-~l~~~gl~~~--~~~~~~~~~- 73 (409)
|++.+||+|||||++|+++|+.|++ .|++|+|||+...+. .+.+..+.+.+.. +++.+|+.+. +........
T Consensus 2 ~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~ 80 (538)
T 2aqj_A 2 NKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR-IGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKA 80 (538)
T ss_dssp CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC-CCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEEC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC-cCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhC
Confidence 1456899999999999999999999 999999999966443 3457888888998 9999998865 433222221
Q ss_pred CeEEEeccC--------------Cccc--cccccc-----------ccC-----------------------CCCCcccc
Q 015331 74 GMVVASSVS--------------CQPA--SEISFK-----------TKG-----------------------NRGGHEVR 103 (409)
Q Consensus 74 ~~~~~~~~~--------------~~~~--~~~~~~-----------~~~-----------------------~~~~~~~~ 103 (409)
++.+..+.. +... ....+. ..+ .......+
T Consensus 81 g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 160 (538)
T 2aqj_A 81 AIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAW 160 (538)
T ss_dssp EEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEE
T ss_pred CccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccE
Confidence 122221111 0000 000000 000 00012235
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCe--EEEEEcCCCEEecCEEEEcCCCchHhH-hHhCCCCCccc--
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLF--KLVNLADGAVFKTKVLIGCDGVNSVVA-KWLGFKKPAFA-- 176 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~--~~v~~~~g~~~~ad~vV~AdG~~s~vr-~~lg~~~~~~~-- 176 (409)
.+++..+.+.|.+.+ .+++++++ +|++++.++++ +.|++.+|.+++||+||+|||.+|.++ +.++.....+.
T Consensus 161 ~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~ 239 (538)
T 2aqj_A 161 HFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDY 239 (538)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTT
T ss_pred EEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccccc
Confidence 789999999998866 37899999 89999886543 578888888899999999999999995 45565432221
Q ss_pred --CceeEEEeeecCccC-CCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCCCCChhHHHHHHHHHhcCCCHH
Q 015331 177 --GRSDIRGCTDFKLRH-GLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKELEGNPDKTKQFVLSKCHDLPEQ 253 (409)
Q Consensus 177 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (409)
...++.......... ...+.......+..+++++|..++. .+.+.+... ..+++...+.+.+.+... +
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~-~~g~v~~~~------~~~~~~~~~~l~~~~~~~-~- 310 (538)
T 2aqj_A 240 LLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGRF-GSGYVFSSH------FTSRDQATADFLKLWGLS-D- 310 (538)
T ss_dssp CCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTEE-EEEEEECTT------TSCHHHHHHHHHHHHTCC-T-
T ss_pred cccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCce-EEEEEEcCC------CCChHHHHHHHHHHhcCC-C-
Confidence 112222222221110 0111112223455678999998853 333344321 123455566666666431 1
Q ss_pred HHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcc
Q 015331 254 VKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALEDGIILARCIAEASTEKPSGVT 333 (409)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~ 333 (409)
+ . ....+++... ...++..+|++++|||||+++|+.|||+|+|++||..|++.|.. +
T Consensus 311 ~------~---~~~~~~~~~~-----~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~---~------ 367 (538)
T 2aqj_A 311 N------Q---PLNQIKFRVG-----RNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD---T------ 367 (538)
T ss_dssp T------C---CCEEEECCCE-----EESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB---T------
T ss_pred C------C---CceEEeeccc-----cccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc---c------
Confidence 1 1 1112222111 12355679999999999999999999999999999999987652 1
Q ss_pred cCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHH
Q 015331 334 KDKAGEDKEEFKRNEIGLKRYATERRWRSCELISM 368 (409)
Q Consensus 334 ~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~ 368 (409)
...+.+++.|+++|+++...+.+.
T Consensus 368 -----------~~~~~~l~~Y~~~~~~~~~~~~~~ 391 (538)
T 2aqj_A 368 -----------SFDPRLSDAFNAEIVHMFDDCRDF 391 (538)
T ss_dssp -----------TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 245678999999999988776654
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.97 E-value=7.7e-30 Score=251.73 Aligned_cols=324 Identities=15% Similarity=0.097 Sum_probs=206.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH---cCCceEEEeCCCccCCcceeEEechhHHH-HHHHcCCchH--HHhhcccc-cCe
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHR---LGIRSLVLESSESLRVTGFAITLWTNAWR-ALDAVGISDS--LRQQHIQL-QGM 75 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~~~~~~~~~-~l~~~gl~~~--~~~~~~~~-~~~ 75 (409)
+.+||+|||||++|+++|+.|++ .|++|+|||+.+.+. .+.+..+.+.+.. +++.+|+.+. +....... .++
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~ 102 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT-LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAI 102 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC-CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc-cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEee
Confidence 46899999999999999999999 999999999976543 3457888899999 9999999876 54433322 223
Q ss_pred EEEeccCC-------------ccccccccc--------------------------------------ccC-------CC
Q 015331 76 VVASSVSC-------------QPASEISFK--------------------------------------TKG-------NR 97 (409)
Q Consensus 76 ~~~~~~~~-------------~~~~~~~~~--------------------------------------~~~-------~~ 97 (409)
.+..+... .......+. ... ..
T Consensus 103 ~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (550)
T 2e4g_A 103 KFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGS 182 (550)
T ss_dssp EEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSC
T ss_pred eEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCC
Confidence 22222111 000000000 000 00
Q ss_pred -CCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeCCe--EEEEEcCCCEEecCEEEEcCCCchHh-HhHhCC
Q 015331 98 -GGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESGLF--KLVNLADGAVFKTKVLIGCDGVNSVV-AKWLGF 170 (409)
Q Consensus 98 -~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~~~--~~v~~~~g~~~~ad~vV~AdG~~s~v-r~~lg~ 170 (409)
.....+.+++..+.+.|.+.+ ++++++++ +|++++.++++ +.|++.+|.++.||+||+|+|.+|.+ ++.++.
T Consensus 183 ~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~ 261 (550)
T 2e4g_A 183 KVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEE 261 (550)
T ss_dssp BCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred CCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCC
Confidence 011235689999999998866 37899999 99999876544 67888888889999999999999998 566676
Q ss_pred CCCccc----CceeEEEeeecCccC-CCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCCCCChhHHHHHHHH
Q 015331 171 KKPAFA----GRSDIRGCTDFKLRH-GLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKELEGNPDKTKQFVLS 245 (409)
Q Consensus 171 ~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (409)
....+. ....+.......... ...+.......++.+++++|..+. ....+.+... ..++++..+.+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~~------~~~~~~~~~~l~~ 334 (550)
T 2e4g_A 262 PFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSSR------FATEDEAVREFCE 334 (550)
T ss_dssp CEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEECTT------TSCHHHHHHHHHH
T ss_pred CcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEecC------CCChHHHHHHHHH
Confidence 532221 111222112221110 011222222335567889998773 3333334221 1234555566666
Q ss_pred HhcCCCHHHHHHHHcCCCCceeeccccccCchhhhccccCCCcEEEeccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHh
Q 015331 246 KCHDLPEQVKAIVENTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAFHPMTPDIGQGGCAALEDGIILARCIAEAS 325 (409)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~G~~~al~da~~La~~l~~~~ 325 (409)
.+...+ .+ ......++... ...++..+|++++|||||+++|+.|||+|+|++||..|++.|..
T Consensus 335 ~~~~~p-~l---------~~~~~i~~~~~-----~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~-- 397 (550)
T 2e4g_A 335 MWHLDP-ET---------QPLNRIRFRVG-----RNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD-- 397 (550)
T ss_dssp HTTCCT-TT---------SCCEEEECCCE-----EESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC--
T ss_pred hhCcCc-cc---------CCCceEEecCC-----CccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc--
Confidence 654321 11 11111111111 12245678999999999999999999999999999999987653
Q ss_pred cCCCCCcccCCCCCchhhhchHHHHHHHHHHHhhhhHHHHHHHhH
Q 015331 326 TEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERRWRSCELISMAY 370 (409)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~ 370 (409)
+ ...++++++|+++|+++...+.++..
T Consensus 398 -~-----------------~~~~~~l~~Y~~~~~~~~~~i~~~~~ 424 (550)
T 2e4g_A 398 -K-----------------SLNPVLTARFNREIETMFDDTRDFIQ 424 (550)
T ss_dssp -T-----------------TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -c-----------------CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 24578999999999999887776653
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.96 E-value=4.3e-28 Score=232.26 Aligned_cols=350 Identities=17% Similarity=0.132 Sum_probs=200.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCc-c---eeEEechhHHHHHHHcCCchHHHhhcccccCeEEEe
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVT-G---FAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVAS 79 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~-~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 79 (409)
++||+||||||+|+++|+.|+++|++|+|||+.+.+... + .+......++..++.+|+.. +.....++.+..+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~ 100 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNE-WPSEEFGYFGHYYYV 100 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCC-SCHHHHCEEEEEEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhh-hhhhcccccceeEEE
Confidence 369999999999999999999999999999998743211 1 22334556777778886521 111222333444333
Q ss_pred ccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCc-eEEEEEEeCCeEEEEEcCCCEEecCEEEE
Q 015331 80 SVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSS-KVVSVEESGLFKLVNLADGAVFKTKVLIG 156 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~-~v~~v~~~~~~~~v~~~~g~~~~ad~vV~ 156 (409)
.... .+.+.... ......+++..+...|.+.+. ++++++.. .+.+++ .....+|+||+
T Consensus 101 ~~~~----~~~~~~~~---~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~ad~VV~ 161 (430)
T 3ihm_A 101 GGPQ----PMRFYGDL---KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQYDLLVV 161 (430)
T ss_dssp CSSS----CEEEEEEE---EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTTSSEEEE
T ss_pred CCCC----ccccchhc---CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhcccCCEEEE
Confidence 2211 11111100 122346888888888887653 56665521 011110 00136899999
Q ss_pred cCCCchHhHhHhCCC-CCcc--cCceeEEEeee-cCccCCCccccceeecCceEEEEEec--CCCeEEEEEEEcCCCCCC
Q 015331 157 CDGVNSVVAKWLGFK-KPAF--AGRSDIRGCTD-FKLRHGLEPKFQQFLGKGFRYGFLPC--NDQTVYWFFNWCPSNQDK 230 (409)
Q Consensus 157 AdG~~s~vr~~lg~~-~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~ 230 (409)
|||.+|.++...... ...+ .......+++. ...+......+..+.+.+ .++++|. .++...+.+.+..+....
T Consensus 162 AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G-~~~~~p~~~~~g~~~~~~~~~~~~~~~ 240 (430)
T 3ihm_A 162 CTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHG-ELIEIPTLSFNGMSTALVLENHIGSDL 240 (430)
T ss_dssp CCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTE-EEEEEEEEETTEEEEEEEEEECTTSSS
T ss_pred CCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCc-ceEEecccCCCcceEEEEEEecCCCcH
Confidence 999999886432111 1111 11222222221 111111112223333333 4566775 334444444444333211
Q ss_pred -C-----CCCChhHHHHHHHHHhcCCCHHHHHHHHcCC------CCceeeccccccCchhhhccccCCCcEEE-eccCCC
Q 015331 231 -E-----LEGNPDKTKQFVLSKCHDLPEQVKAIVENTP------LDSILVSPLRYRYPWEVLWGNISKGNVCV-AGDAFH 297 (409)
Q Consensus 231 -~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~l-vGDAA~ 297 (409)
. ...+++++.+.+++.+..+.+.+.+.+.... ...+..... .+.......+|..+++++ +|||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~GDAah 318 (430)
T 3ihm_A 241 EVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGV--VPAFRDGHATLNNGKTIIGLGDIQA 318 (430)
T ss_dssp GGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECC--CCEEBCSEEECTTSCEEEECGGGTE
T ss_pred HHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecce--eecccccccccCCCCEEEEecCccc
Confidence 1 1136777777888888777787777665543 111111111 011111234677888888 999999
Q ss_pred CCCCCCcchhhhHhhHHHHHHHHHHHHhcCCCCCcccCCCCCchhhhchHHHHHHHHHHHhh-hhHHHHHHHhHHhcc--
Q 015331 298 PMTPDIGQGGCAALEDGIILARCIAEASTEKPSGVTKDKAGEDKEEFKRNEIGLKRYATERR-WRSCELISMAYIVGY-- 374 (409)
Q Consensus 298 ~~~P~~G~G~~~al~da~~La~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~r~-~~~~~~~~~s~~~~~-- 374 (409)
.++|++|||+|+|++||..|++.|... + +.+++|..|+.+|+ .++....+.+..+..
T Consensus 319 ~~~p~~g~G~~~a~~da~~l~~~l~~~--~------------------~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 378 (430)
T 3ihm_A 319 TVDPVLGQGANMASYAAWILGEEILAH--S------------------VYDLRFSEHLERRRQDRVLCATRWTNFTLSAL 378 (430)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHHHHHHC--S------------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCchhhhHHHHHHHHHHHHHHHHhc--C------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999973 1 46789999999888 777777777655532
Q ss_pred ---chhHHHHHHHHHHHHHhhhhhh
Q 015331 375 ---DGKIINFLRDKIFSVLLGRLMM 396 (409)
Q Consensus 375 ---~~~~~~~~r~~~~~~~~~~~~~ 396 (409)
.......++.......+.+.+.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (430)
T 3ihm_A 379 SALPPEFLAFLQILSQSREMADEFT 403 (430)
T ss_dssp HHCCHHHHHHHHHHHHCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhhCHHHHHHHH
Confidence 2233344444444444444443
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.91 E-value=4.3e-24 Score=207.72 Aligned_cols=139 Identities=20% Similarity=0.251 Sum_probs=104.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
..+||+||||||+|+++|+.|+++|++|+|||+.+.+... ....+.+.+.+.|+.+|+++....
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-~~~~~~~~~~~~l~~~g~~~~~~~--------------- 154 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-NVLHLWPFTIHDLRALGAKKFYGR--------------- 154 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-CEEECCHHHHHHHHTTTHHHHCTT---------------
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-CcccCChhHHHHHHHcCCcccccc---------------
Confidence 3579999999999999999999999999999999876432 456677888888888876432100
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEe---CCeEEEEE--c-CC--CEEecC
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEES---GLFKLVNL--A-DG--AVFKTK 152 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~---~~~~~v~~--~-~g--~~~~ad 152 (409)
+.. .....+++..+.+.|.+.+ .+++++++++|++++.+ ++.+.|++ . +| .++++|
T Consensus 155 ------~~~--------~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad 220 (497)
T 2bry_A 155 ------FCT--------GTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFD 220 (497)
T ss_dssp ------TTC--------TTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBS
T ss_pred ------ccc--------cccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcC
Confidence 000 0112466777888777655 37899999999999874 34677777 3 55 468999
Q ss_pred EEEEcCCCchHhHhHhCCC
Q 015331 153 VLIGCDGVNSVVAKWLGFK 171 (409)
Q Consensus 153 ~vV~AdG~~s~vr~~lg~~ 171 (409)
+||+|||.+|.+|+..+..
T Consensus 221 ~VV~A~G~~S~~r~~~~~~ 239 (497)
T 2bry_A 221 VLISAAGGKFVPEGFTIRE 239 (497)
T ss_dssp EEEECCCTTCCCTTCEEEE
T ss_pred EEEECCCCCcccccccchh
Confidence 9999999999998766543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.86 E-value=4.7e-20 Score=170.84 Aligned_cols=297 Identities=14% Similarity=0.058 Sum_probs=156.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeE------------Eec---hhHHHHHHHcCCchHHHhh
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAI------------TLW---TNAWRALDAVGISDSLRQQ 68 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~------------~~~---~~~~~~l~~~gl~~~~~~~ 68 (409)
++||+|||||++|+++|+.|+++|++|+||||.+.+....... .+. +...+.++.+. .. ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 77 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQ---AQ-GH 77 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHH---HH-TS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHH---hC-CC
Confidence 4799999999999999999999999999999987653221111 111 11222222221 00 00
Q ss_pred cccccCeEEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCE
Q 015331 69 HIQLQGMVVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAV 148 (409)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~ 148 (409)
........... ..+. + ..................+.+.|.+ +++++++++|++++.++++|+|++.+|+.
T Consensus 78 ~~~~~~~~~~~-~~~~----~--~~~~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~~~v~~~~g~~ 147 (336)
T 1yvv_A 78 VAEWTPLLYNF-HAGR----L--SPSPDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGEEHWNLLDAEGQN 147 (336)
T ss_dssp EEEECCCEEEE-SSSB----C--CCCCTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECSSCEEEEETTSCE
T ss_pred eeeccccceec-cCcc----c--ccCCCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeCCEEEEEeCCCcC
Confidence 11111111111 1110 0 0000000000011123445555554 67899999999999999999999999986
Q ss_pred Ee-cCEEEEcCCCchHhHhHhCCCC-----CcccCceeEEEeeecCccCCCccccceeecCceEEEEE-----ecCCCe-
Q 015331 149 FK-TKVLIGCDGVNSVVAKWLGFKK-----PAFAGRSDIRGCTDFKLRHGLEPKFQQFLGKGFRYGFL-----PCNDQT- 216 (409)
Q Consensus 149 ~~-ad~vV~AdG~~s~vr~~lg~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~- 216 (409)
+. +|+||+|+|.+|.+|...+.+. .......++...+.++.... .+....+...+...+++ |...+.
T Consensus 148 ~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~p~~~~~~ 226 (336)
T 1yvv_A 148 HGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQ-TPMQGCFVQDSPLDWLARNRSKPERDDTL 226 (336)
T ss_dssp EEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCS-CCCCEEEECSSSEEEEEEGGGSTTCCCSS
T ss_pred ccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCC-CCCCeEEeCCCceeEEEecCcCCCCCCCC
Confidence 64 9999999999998875533210 01111133333334443322 12222233344333332 444443
Q ss_pred EEEEEEEcCCCCCCCCCCChhHHHHHHHHHhcCCCHHHHHHHHcCCCC--ceeeccccccCchhhhccc--cCCCcEEEe
Q 015331 217 VYWFFNWCPSNQDKELEGNPDKTKQFVLSKCHDLPEQVKAIVENTPLD--SILVSPLRYRYPWEVLWGN--ISKGNVCVA 292 (409)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~v~lv 292 (409)
..|.+....+........+++++.+.+.+.+...-.. . ..... ....+....... ...... ...+|++|+
T Consensus 227 ~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~--~---~~~p~~~~~~rw~~a~~~~-~~~~~~~~~~~~rl~la 300 (336)
T 1yvv_A 227 DTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDC--T---MPAPVFSLAHRWLYARPAG-AHEWGALSDADLGIYVC 300 (336)
T ss_dssp EEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSS--C---CCCCSEEEEEEEEEEEESS-CCCCSCEEETTTTEEEC
T ss_pred cEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCC--C---CCCCcEEEccccCccCCCC-CCCCCeeecCCCCEEEE
Confidence 3344444322222223456677777777666532210 0 00001 011111110000 000001 134899999
Q ss_pred ccCCCCCCCCCcchhhhHhhHHHHHHHHHHHHhcC
Q 015331 293 GDAFHPMTPDIGQGGCAALEDGIILARCIAEASTE 327 (409)
Q Consensus 293 GDAA~~~~P~~G~G~~~al~da~~La~~l~~~~~~ 327 (409)
||++| |.|++.|+.++..||+.|.+.+..
T Consensus 301 GDa~~------g~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 301 GDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp CGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCC------CCCHHHHHHHHHHHHHHHHHHhhh
Confidence 99996 349999999999999999998764
No 31
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.69 E-value=3.1e-15 Score=140.88 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=55.2
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEE-EEEcCCCEEecCEEEEcCCCch-HhHhHhCCC
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKL-VNLADGAVFKTKVLIGCDGVNS-VVAKWLGFK 171 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~-v~~~~g~~~~ad~vV~AdG~~s-~vr~~lg~~ 171 (409)
.++...+.+.|.+.+ .+++++++++|++++.+++.+. |++.+| +++||.||+|+|.+| .+.+.++..
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIK 215 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCC
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCC
Confidence 467777888777655 3789999999999998888887 888777 799999999999998 467777765
No 32
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.68 E-value=2.9e-16 Score=147.97 Aligned_cols=194 Identities=14% Similarity=0.041 Sum_probs=110.7
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH-hHhHhCCCCCcccCcee
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV-VAKWLGFKKPAFAGRSD 180 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~-vr~~lg~~~~~~~~~~~ 180 (409)
.++...+.+.|.+.+ .+++++++++|++++.+++.+.|++.+| +++||.||+|+|.+|. +.+.++...+.......
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g~ 238 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGE 238 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCceeccceE
Confidence 567778888887765 3689999999999998888888888777 7999999999999986 77777654332221111
Q ss_pred EEEeeecCccCCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCCCCChhHHHHHHHHHhcCCCHHHHHHHHc
Q 015331 181 IRGCTDFKLRHGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKELEGNPDKTKQFVLSKCHDLPEQVKAIVEN 260 (409)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (409)
+. ....+.. .. .. .++.. ..+++|..++.+.+....... ......++ +..+.+.+.+.++.+.+. .
T Consensus 239 ~~-~~~~~~~-~~--~~-~~~~~--~~~~~p~~~g~~~vG~~~~~~--~~~~~~~~-~~~~~l~~~~~~~~p~l~----~ 304 (382)
T 1ryi_A 239 CL-SVWNDDI-PL--TK-TLYHD--HCYIVPRKSGRLVVGATMKPG--DWSETPDL-GGLESVMKKAKTMLPAIQ----N 304 (382)
T ss_dssp EE-EEECCSS-CC--CS-EEEET--TEEEEECTTSEEEEECCCEET--CCCCSCCH-HHHHHHHHHHHHHCGGGG----G
T ss_pred EE-EECCCCC-Cc--cc-eEEcC--CEEEEEcCCCeEEEeeccccc--CCCCCCCH-HHHHHHHHHHHHhCCCcC----C
Confidence 11 1121111 11 11 22233 356788887764443321111 11112222 223344443332222211 1
Q ss_pred CCCCceeeccccccCchhhhccccCCCcEEEeccCC-----CCCCCCCcchhhhHhhHHHHHHHHHHH
Q 015331 261 TPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAF-----HPMTPDIGQGGCAALEDGIILARCIAE 323 (409)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA-----~~~~P~~G~G~~~al~da~~La~~l~~ 323 (409)
.. ....+. ... .+..++..++|++. ....++.|.|+.+|...|..+++.|..
T Consensus 305 ~~--~~~~w~--g~~-------~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 305 MK--VDRFWA--GLR-------PGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp SE--EEEEEE--EEE-------EECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred Cc--eeeEEE--Eec-------ccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 10 011110 000 12346677778753 345678899999999999999988764
No 33
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.67 E-value=3.6e-15 Score=150.62 Aligned_cols=158 Identities=17% Similarity=0.120 Sum_probs=94.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCC--cc-eeEEech------------------hHHHHHHHcCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRV--TG-FAITLWT------------------NAWRALDAVGIS 62 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~--~~-~~~~~~~------------------~~~~~l~~~gl~ 62 (409)
.+||+|||||++|+++|+.|+++|++|+|||+.+.+.. .+ .+..+.+ .+.++++.+++.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVK 351 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Confidence 47999999999999999999999999999999765431 11 1111111 123333443221
Q ss_pred hHHHh---------------------hcccccCeEEEeccCCccccccccccc-CCCCCccccccCHHHHHHHHHhhC--
Q 015331 63 DSLRQ---------------------QHIQLQGMVVASSVSCQPASEISFKTK-GNRGGHEVRSVKRSLLMEALEREL-- 118 (409)
Q Consensus 63 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~l~~~~-- 118 (409)
..... .+.+........... .......... ..........++...+.+.|.+.+
T Consensus 352 ~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~--~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~ 429 (676)
T 3ps9_A 352 FDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANA--VEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQ 429 (676)
T ss_dssp CCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHH--HHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred cCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHH--HHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHh
Confidence 10000 000000000110000 0000000000 000001123466778888887755
Q ss_pred CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 119 PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 119 ~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
.+++++++++|+++..++++|.|++.+|.++.||.||+|+|.+|.
T Consensus 430 ~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 430 QGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred CCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 378999999999999999999999988888999999999999986
No 34
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.67 E-value=3e-15 Score=143.73 Aligned_cols=60 Identities=17% Similarity=0.124 Sum_probs=51.8
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCc---eEEEEEEeCCeEE-EEEcCCCEEecCEEEEcCCCchH
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSS---KVVSVEESGLFKL-VNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~---~v~~v~~~~~~~~-v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
.++...+.+.|.+.+ .++++++++ +|+++..+++.++ |++.+|.+++||.||+|+|.+|.
T Consensus 157 ~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 456677888887755 378999999 9999999888888 99999988999999999999985
No 35
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.65 E-value=1.1e-15 Score=143.81 Aligned_cols=67 Identities=15% Similarity=0.254 Sum_probs=56.7
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH-hHhHhCCC
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV-VAKWLGFK 171 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~-vr~~lg~~ 171 (409)
.++...+.+.|.+.+ .+++++++++|++++.+++.+.|++.+| +++||.||+|+|.+|. +.+.++..
T Consensus 150 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 150 DIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred eECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 467778888887765 3789999999999999988899998887 7999999999999984 67777765
No 36
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.65 E-value=1.1e-14 Score=137.80 Aligned_cols=172 Identities=19% Similarity=0.185 Sum_probs=97.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcce---eEE-ec----h-hH-HHHHHHcCCchHHHhh-c
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGF---AIT-LW----T-NA-WRALDAVGISDSLRQQ-H 69 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~---~~~-~~----~-~~-~~~l~~~gl~~~~~~~-~ 69 (409)
|++++||+|||||++|+++|+.|+++|++|+|+|+.+.....+. ... +. . .. ....+.+.+++++.+. .
T Consensus 1 M~~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (397)
T 2oln_A 1 MTESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCE 80 (397)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhC
Confidence 66678999999999999999999999999999999876531111 111 11 0 00 0111222223333221 1
Q ss_pred cc---ccCeEEEeccCC------------------ccccccc-------ccccCCCC------CccccccCHHHHHHHHH
Q 015331 70 IQ---LQGMVVASSVSC------------------QPASEIS-------FKTKGNRG------GHEVRSVKRSLLMEALE 115 (409)
Q Consensus 70 ~~---~~~~~~~~~~~~------------------~~~~~~~-------~~~~~~~~------~~~~~~i~r~~l~~~l~ 115 (409)
.. ..+......... .....+. ++...... ......++...+.+.|.
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 160 (397)
T 2oln_A 81 RRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALF 160 (397)
T ss_dssp CCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHH
T ss_pred ccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHH
Confidence 01 111111111110 0000000 00000000 00112455566777776
Q ss_pred hhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch-HhHhHhCCCCC
Q 015331 116 REL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS-VVAKWLGFKKP 173 (409)
Q Consensus 116 ~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s-~vr~~lg~~~~ 173 (409)
+.+ .+++++++++|++++.+++.++|++.++ +++||.||+|+|.+| .+++.++...+
T Consensus 161 ~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~p 220 (397)
T 2oln_A 161 TLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGARLA 220 (397)
T ss_dssp HHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCCCC
T ss_pred HHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCCCC
Confidence 654 3789999999999999888888887666 699999999999995 56777776433
No 37
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.65 E-value=3.8e-15 Score=141.40 Aligned_cols=197 Identities=12% Similarity=-0.019 Sum_probs=105.2
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCe-EEEEEcCCCEEecCEEEEcCCCch-HhHhHhCCCCCcccCce
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLF-KLVNLADGAVFKTKVLIGCDGVNS-VVAKWLGFKKPAFAGRS 179 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~-~~v~~~~g~~~~ad~vV~AdG~~s-~vr~~lg~~~~~~~~~~ 179 (409)
.++...+.+.|.+.+ .+++++++++|++++.+++. +.|++.+| ++++|.||+|+|.+| .+++.++...+......
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~~~~~~ 248 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPIQSHPL 248 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCccccce
Confidence 456667777777655 37899999999999987665 56888777 699999999999998 57888877654332111
Q ss_pred eEEEeeecCccCCCccccceeecCceEEEEEecCCCeEEEEEEEcCCCCCCCCCCChhHHHHHHHHHhcCCCHHHHHHHH
Q 015331 180 DIRGCTDFKLRHGLEPKFQQFLGKGFRYGFLPCNDQTVYWFFNWCPSNQDKELEGNPDKTKQFVLSKCHDLPEQVKAIVE 259 (409)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (409)
.+. ... +...... ..+...+..+++.|..++.+.+......... .....+. ...+.+.+.+..+.|.+ .
T Consensus 249 ~~~-~~~-~~~~~~~---~~~~~~~~~~y~~p~~~g~~~ig~~~~~~~~-~~~~~~~-~~~~~l~~~~~~~~p~l----~ 317 (405)
T 2gag_B 249 QAL-VSE-LFEPVHP---TVVMSNHIHVYVSQAHKGELVMGAGIDSYNG-YGQRGAF-HVIQEQMAAAVELFPIF----A 317 (405)
T ss_dssp EEE-EEE-EBCSCCC---SEEEETTTTEEEEECTTSEEEEEEEECSSCC-CSSCCCT-HHHHHHHHHHHHHCGGG----G
T ss_pred eEE-Eec-CCccccC---ceEEeCCCcEEEEEcCCCcEEEEeccCCCCc-cccCCCH-HHHHHHHHHHHHhCCcc----c
Confidence 111 111 1111111 1222333346788888887665544432111 1111222 22333444333222221 1
Q ss_pred cCCCCceeeccccccCchhhhccccCCCcEEEeccCC----CCCCCCCcchhhhHhhHHHHHHHHHHH
Q 015331 260 NTPLDSILVSPLRYRYPWEVLWGNISKGNVCVAGDAF----HPMTPDIGQGGCAALEDGIILARCIAE 323 (409)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA----~~~~P~~G~G~~~al~da~~La~~l~~ 323 (409)
...... .+. ... ....++..++|++. ....-+.|.|+..|...|..|++.|..
T Consensus 318 ~~~~~~--~w~--g~~-------~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 318 RAHVLR--TWG--GIV-------DTTMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp GCEECE--EEE--EEE-------EEETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred cCCcce--EEe--ecc-------ccCCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 111111 110 000 12357788888864 111223456666666666666666654
No 38
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.64 E-value=2.7e-15 Score=140.47 Aligned_cols=68 Identities=15% Similarity=0.240 Sum_probs=56.0
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCe-EEEEEcCCC--EEecCEEEEcCCCch-HhHhHh-CCC
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLF-KLVNLADGA--VFKTKVLIGCDGVNS-VVAKWL-GFK 171 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~-~~v~~~~g~--~~~ad~vV~AdG~~s-~vr~~l-g~~ 171 (409)
.++...+.+.|.+.+ .+++++++++|++++.++++ +.|.+.+|+ +++||.||+|+|.+| .+.+.+ |.+
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 466777888887765 37899999999999988765 889888883 799999999999999 466777 765
No 39
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.63 E-value=3.9e-15 Score=150.56 Aligned_cols=60 Identities=13% Similarity=0.003 Sum_probs=50.9
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCC-EEecCEEEEcCCCchH
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGA-VFKTKVLIGCDGVNSV 163 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~-~~~ad~vV~AdG~~s~ 163 (409)
.++...+.+.|.+.+ .+++++++++|++++.++++|.|++.+|. +++||.||+|+|.+|.
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 456777888887755 37899999999999998888999998887 7999999999999985
No 40
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.63 E-value=3.7e-15 Score=140.66 Aligned_cols=165 Identities=14% Similarity=0.150 Sum_probs=95.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC--C-cce-eEEech------hHHH-HHHHcCCchHHHhhc---
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR--V-TGF-AITLWT------NAWR-ALDAVGISDSLRQQH--- 69 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~--~-~~~-~~~~~~------~~~~-~l~~~gl~~~~~~~~--- 69 (409)
++||+|||||++|+++|+.|+++|++|+|||+..... . ... +-.+.+ ...+ ..+.+.+++.+.+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999987543 1 111 111110 1111 111122223332211
Q ss_pred -ccccCeEEEecc-C--------------Cccccccc-------ccccCCCC------CccccccCHHHHHHHHHhhC--
Q 015331 70 -IQLQGMVVASSV-S--------------CQPASEIS-------FKTKGNRG------GHEVRSVKRSLLMEALEREL-- 118 (409)
Q Consensus 70 -~~~~~~~~~~~~-~--------------~~~~~~~~-------~~~~~~~~------~~~~~~i~r~~l~~~l~~~~-- 118 (409)
....+....... . +.....+. ++...... ......++...+.+.|.+.+
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEA 162 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHHH
Confidence 011111111111 0 00000000 00000000 01112456677888877755
Q ss_pred CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH-hHhHhC
Q 015331 119 PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV-VAKWLG 169 (409)
Q Consensus 119 ~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~-vr~~lg 169 (409)
.+++++++++|++++.+++.+.|++.++ +++||.||+|+|.+|. +.+.++
T Consensus 163 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 163 RGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp TTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT
T ss_pred CCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc
Confidence 3789999999999998888888888766 6999999999999985 445555
No 41
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.62 E-value=1.1e-15 Score=137.56 Aligned_cols=37 Identities=32% Similarity=0.495 Sum_probs=34.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
.+||+|||||||||+||+.|+++|++|+||||.+.++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 3899999999999999999999999999999998764
No 42
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.60 E-value=3e-14 Score=137.95 Aligned_cols=55 Identities=20% Similarity=0.298 Sum_probs=47.6
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
.+.+.|.+.+..++|+++++|++|+.++++++|++.+|++++||.||.|...+..
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~ 290 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAA 290 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHH
Confidence 5667777776557899999999999998889999999988999999999987664
No 43
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.59 E-value=9.3e-14 Score=135.34 Aligned_cols=210 Identities=11% Similarity=-0.001 Sum_probs=107.7
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEc---CCC--EEecCEEEEcCCCchH-hHhH-hCCCC-C
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLA---DGA--VFKTKVLIGCDGVNSV-VAKW-LGFKK-P 173 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~---~g~--~~~ad~vV~AdG~~s~-vr~~-lg~~~-~ 173 (409)
.++...+...|.+.+ .+++++.+++|+++..+++.+.|++. +|+ +++||.||+|+|.+|. +++. ++... .
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~ 224 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPY 224 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSS
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCccc
Confidence 467888888888765 37899999999999988877778774 565 7899999999999996 4554 54321 1
Q ss_pred cccCceeEEEeeecCccCCCccccceee--cCceEEEEEecCCCeEEEEEEEcCCC-CCCCCCCChhHHHHHHHHHhcCC
Q 015331 174 AFAGRSDIRGCTDFKLRHGLEPKFQQFL--GKGFRYGFLPCNDQTVYWFFNWCPSN-QDKELEGNPDKTKQFVLSKCHDL 250 (409)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 250 (409)
...........+. ...+ .....++ .++..++++|..++...+..+..... .......+++.. +++++.+..+
T Consensus 225 ~i~p~rG~~~~~~--~~~~--~~~~~~~~~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ 299 (501)
T 2qcu_A 225 GIRLIKGSHIVVP--RVHT--QKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEI-NYLLNVYNTH 299 (501)
T ss_dssp CBCCEEEEEEEEE--CSSS--CSCEEEEECTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHH-HHHHHHHHHH
T ss_pred ccccceeEEEEEC--CCCC--CceEEEeecCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHH-HHHHHHHHHh
Confidence 1111111111112 1111 1111222 34556788999877543332211111 111122233322 3333333211
Q ss_pred CH-HHHHHHHcCCCC-ce-eeccccc-cCchhhhccccCCCcEEE--eccCCCCCCCCCcchhhhHhhHHHHHHHHHHHH
Q 015331 251 PE-QVKAIVENTPLD-SI-LVSPLRY-RYPWEVLWGNISKGNVCV--AGDAFHPMTPDIGQGGCAALEDGIILARCIAEA 324 (409)
Q Consensus 251 ~~-~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~v~l--vGDAA~~~~P~~G~G~~~al~da~~La~~l~~~ 324 (409)
.+ .+ ...... .+ ...|... ..|. ......+.++. .++..+-+-.++|.|+..+-.-|..+++.+.+.
T Consensus 300 ~p~~l----~~~~v~~~~aG~Rp~~~d~~p~---~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~~ 372 (501)
T 2qcu_A 300 FKKQL----SRDDIVWTYSGVRPLCDDESDS---PQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPY 372 (501)
T ss_dssp BSSCC----CGGGCCEEEEEEECCBCCCCSS---GGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGGG
T ss_pred cCCCC----CcccEEEEEEEEeeecCCCCCc---cccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHHh
Confidence 11 11 001111 11 1111111 0110 11223455665 566666666677888777766666666666665
Q ss_pred h
Q 015331 325 S 325 (409)
Q Consensus 325 ~ 325 (409)
+
T Consensus 373 ~ 373 (501)
T 2qcu_A 373 Y 373 (501)
T ss_dssp S
T ss_pred h
Confidence 4
No 44
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.57 E-value=2.6e-14 Score=135.34 Aligned_cols=151 Identities=20% Similarity=0.206 Sum_probs=95.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCc-------ceeEEe---c---------hhHHHHHHHcCCc
Q 015331 2 EEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVT-------GFAITL---W---------TNAWRALDAVGIS 62 (409)
Q Consensus 2 ~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~-------~~~~~~---~---------~~~~~~l~~~gl~ 62 (409)
++++||+|||||++|+++|+.|+++|.+|+|+|+.+.+... .+...- . ......+..+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 35689999999999999999999999999999999865321 111110 0 0011222332211
Q ss_pred hHHHhhcccccCeEEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEE
Q 015331 63 DSLRQQHIQLQGMVVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKL 140 (409)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~ 140 (409)
+.+... . -.++.+.....+ .......+..+.+.|.+.+. +++++++++|+++..+++.+.
T Consensus 105 ~~~~~~-~-~~Gi~~~~~~~g----------------~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~ 166 (417)
T 3v76_A 105 DFVALV-E-RHGIGWHEKTLG----------------QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFR 166 (417)
T ss_dssp HHHHHH-H-HTTCCEEECSTT----------------EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEE
T ss_pred HHHHHH-H-HcCCCcEEeeCC----------------EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEE
Confidence 111000 0 001111111110 11113456677777776553 789999999999999988999
Q ss_pred EEEcCCCEEecCEEEEcCCCch-----------HhHhHhCCC
Q 015331 141 VNLADGAVFKTKVLIGCDGVNS-----------VVAKWLGFK 171 (409)
Q Consensus 141 v~~~~g~~~~ad~vV~AdG~~s-----------~vr~~lg~~ 171 (409)
|.+.+| +++||.||+|+|.+| .+++.+|..
T Consensus 167 V~~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 167 VTTSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp EEETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred EEECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 999888 799999999999998 456666665
No 45
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.54 E-value=1.7e-13 Score=128.39 Aligned_cols=59 Identities=15% Similarity=0.208 Sum_probs=48.9
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
.++...+.+.|.+.+ .+++++++++|++++.+++.+.|++.+|+ ++||.||+|+|.+|.
T Consensus 145 ~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 455667777777655 37899999999999988888888888775 999999999999884
No 46
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.53 E-value=8.1e-14 Score=137.27 Aligned_cols=68 Identities=15% Similarity=-0.048 Sum_probs=53.5
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeE-EEEEcC---C--CEEecCEEEEcCCCch-HhHhHhCCC
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFK-LVNLAD---G--AVFKTKVLIGCDGVNS-VVAKWLGFK 171 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~-~v~~~~---g--~~~~ad~vV~AdG~~s-~vr~~lg~~ 171 (409)
.++...+...|.+.+ .+++++.+++|+++..+++++ .|++.+ | .+++||.||+|+|.+| .+++.+|..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 567777888877655 378999999999999888764 466654 3 3789999999999999 567777665
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.53 E-value=1.8e-13 Score=131.73 Aligned_cols=69 Identities=20% Similarity=0.168 Sum_probs=53.9
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEEEEEE---------------eCCe-EEEEEcCCCEE--ecCEEEEcCCCchH
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVVSVEE---------------SGLF-KLVNLADGAVF--KTKVLIGCDGVNSV 163 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~---------------~~~~-~~v~~~~g~~~--~ad~vV~AdG~~s~ 163 (409)
.++...+.+.|.+.+ .+++++++++|++++. +++. +.|.+.+| ++ .||.||+|+|.+|.
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred EEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 466778888887765 3789999999999987 4555 46788777 58 99999999999986
Q ss_pred -hHhHhCCCCC
Q 015331 164 -VAKWLGFKKP 173 (409)
Q Consensus 164 -vr~~lg~~~~ 173 (409)
+.+.++...+
T Consensus 256 ~l~~~~g~~~~ 266 (448)
T 3axb_A 256 RLLNPLGIDTF 266 (448)
T ss_dssp HHHGGGTCCCS
T ss_pred HHHHHcCCCCc
Confidence 6777766543
No 48
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.52 E-value=2.4e-13 Score=125.94 Aligned_cols=143 Identities=15% Similarity=0.083 Sum_probs=82.7
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCceEEEeCCCccCCcceeE-----------------EechhHHHHHHHcCCchH
Q 015331 5 EDIVIVGAGIAGLTTSLALHR---LGIRSLVLESSESLRVTGFAI-----------------TLWTNAWRALDAVGISDS 64 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~-----------------~~~~~~~~~l~~~gl~~~ 64 (409)
+||+|||||++|+++|+.|++ +|++|+||||++.+....... ...+.....+..+ .+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~--~~~ 79 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRF--YDE 79 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHH--HHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHH--HHH
Confidence 599999999999999999999 999999999987543211110 0111100011000 011
Q ss_pred HHhhcccccCeEEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc
Q 015331 65 LRQQHIQLQGMVVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA 144 (409)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~ 144 (409)
+...+. ...+. .. . .......... .+. ..-.-..+.+.|.+.+ +++|+++++|++++.++++|+|++.
T Consensus 80 ~~~~g~----~~~~~--~~-~-~~~~~~~~~~--~~~-~~~g~~~l~~~l~~~~-g~~i~~~~~V~~i~~~~~~~~v~~~ 147 (342)
T 3qj4_A 80 LLAYGV----LRPLS--SP-I-EGMVMKEGDC--NFV-APQGISSIIKHYLKES-GAEVYFRHRVTQINLRDDKWEVSKQ 147 (342)
T ss_dssp HHHTTS----CEECC--SC-E-ETCCC--CCE--EEE-CTTCTTHHHHHHHHHH-TCEEESSCCEEEEEECSSSEEEEES
T ss_pred HHhCCC----eecCc--hh-h-cceeccCCcc--cee-cCCCHHHHHHHHHHhc-CCEEEeCCEEEEEEEcCCEEEEEEC
Confidence 111110 00000 00 0 0000000000 000 0011234566666655 6899999999999999989999999
Q ss_pred CCCEEecCEEEEcCCCc
Q 015331 145 DGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 145 ~g~~~~ad~vV~AdG~~ 161 (409)
+|+++.+|.||.|....
T Consensus 148 ~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 148 TGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp SSCCEEESEEEECSCHH
T ss_pred CCCEEEcCEEEECCCHH
Confidence 99888999999999753
No 49
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.50 E-value=1.2e-12 Score=127.72 Aligned_cols=60 Identities=22% Similarity=0.299 Sum_probs=41.0
Q ss_pred HHHHHHhhC--CCCeEEeCceEEEEEEeCCeEE-EEEcCCCEEecCEEEEcCCCchHhHhHhC
Q 015331 110 LMEALEREL--PSGTIRYSSKVVSVEESGLFKL-VNLADGAVFKTKVLIGCDGVNSVVAKWLG 169 (409)
Q Consensus 110 l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~-v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 169 (409)
+.+.|.+.+ .+++|+++++|++|..++++++ |++.+|+++.||.||.+.+.....++.++
T Consensus 223 l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 223 LVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------
T ss_pred hHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcc
Confidence 333444433 2689999999999999998876 89999999999999998887766655553
No 50
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.48 E-value=1.8e-12 Score=122.97 Aligned_cols=69 Identities=10% Similarity=0.166 Sum_probs=50.4
Q ss_pred ccCHHHHHHHHHhhC--CCCeEEeCceEE---------EEEEeCCeEEEEEcCCCEEecCEEEEcCCCch-HhHh-HhCC
Q 015331 104 SVKRSLLMEALEREL--PSGTIRYSSKVV---------SVEESGLFKLVNLADGAVFKTKVLIGCDGVNS-VVAK-WLGF 170 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~--~~~~i~~~~~v~---------~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s-~vr~-~lg~ 170 (409)
.++...+.+.|.+.+ .+++++++++|+ +++.+++.+.|++.++ +++||.||+|+|.+| .+++ .++.
T Consensus 168 ~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~ 246 (405)
T 3c4n_A 168 TYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGL 246 (405)
T ss_dssp EECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCC
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCC
Confidence 567778888888765 368999999999 8877767777777666 799999999999999 6777 8877
Q ss_pred CCC
Q 015331 171 KKP 173 (409)
Q Consensus 171 ~~~ 173 (409)
..+
T Consensus 247 ~~~ 249 (405)
T 3c4n_A 247 HTR 249 (405)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 51
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.45 E-value=1.4e-11 Score=119.25 Aligned_cols=54 Identities=17% Similarity=0.119 Sum_probs=46.0
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
.+.+.|.+.+..++|+++++|++|+.++++++|++.+| ++.||.||.|.+.+..
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~ 290 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQV 290 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHH
Confidence 46666777765579999999999999999999999999 7999999999997653
No 52
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.45 E-value=1.3e-12 Score=125.33 Aligned_cols=154 Identities=21% Similarity=0.213 Sum_probs=94.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCc----c---eeEEechhHHHHHHHcCCchHHHhhc-ccc---
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVT----G---FAITLWTNAWRALDAVGISDSLRQQH-IQL--- 72 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~----~---~~~~~~~~~~~~l~~~gl~~~~~~~~-~~~--- 72 (409)
++||+|||||++|+++|+.|+++|.+|+|+|+.+.+... + +...-......+++.++....+.... ...
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 479999999999999999999999999999998764321 0 11100000112222222111110000 000
Q ss_pred --------cCeEEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCe-EEE
Q 015331 73 --------QGMVVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLF-KLV 141 (409)
Q Consensus 73 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~-~~v 141 (409)
.++.+.....+ ..++ ..-....+.+.|.+.+ .+++++++++|+++..+++. +.|
T Consensus 106 ~~~~~~~~~G~~~~~~~~g-----~~~p----------~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V 170 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHG-----RMFP----------VSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAV 170 (447)
T ss_dssp HHHHHHHHTTCCEEECGGG-----EEEE----------TTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEE
T ss_pred HHHHHHHhcCCceEEeeCC-----EEEC----------CCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEE
Confidence 00001000000 0000 0113456666666544 37899999999999987776 788
Q ss_pred EEcCCCEEecCEEEEcCCCch-----------HhHhHhCCCC
Q 015331 142 NLADGAVFKTKVLIGCDGVNS-----------VVAKWLGFKK 172 (409)
Q Consensus 142 ~~~~g~~~~ad~vV~AdG~~s-----------~vr~~lg~~~ 172 (409)
++.+|++++||.||+|+|.+| .+++.+|...
T Consensus 171 ~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 171 ILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp EETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred EECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 888887899999999999999 7888887753
No 53
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.45 E-value=6.3e-13 Score=125.42 Aligned_cols=149 Identities=24% Similarity=0.271 Sum_probs=92.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCc------c-eeEE---echh---------HHHHHHHcCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVT------G-FAIT---LWTN---------AWRALDAVGI 61 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~------~-~~~~---~~~~---------~~~~l~~~gl 61 (409)
|++++||+|||||++|+++|+.|+++|.+|+|+|+.+.+... + +... ..+. ....+..+..
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTN 80 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCH
Confidence 667899999999999999999999999999999998765211 0 1000 0000 0011111110
Q ss_pred chH---HHhhcccccCeEEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEe-
Q 015331 62 SDS---LRQQHIQLQGMVVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEES- 135 (409)
Q Consensus 62 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~- 135 (409)
.+. +... ++.+.....+. .++ . . ....+.+.|.+.+. +++++++++|+++..+
T Consensus 81 ~~~~~~~~~~-----Gi~~~~~~~g~-----~~p---------~-~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~ 139 (401)
T 2gqf_A 81 WDFISLVAEQ-----GITYHEKELGQ-----LFC---------D-E-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQ 139 (401)
T ss_dssp HHHHHHHHHT-----TCCEEECSTTE-----EEE---------T-T-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECC
T ss_pred HHHHHHHHhC-----CCceEECcCCE-----Ecc---------C-C-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEccc
Confidence 000 0011 11111000000 000 0 1 45556666665442 7899999999999876
Q ss_pred ---CCeEEEEEcCCCEEecCEEEEcCCCch-----------HhHhHhCCC
Q 015331 136 ---GLFKLVNLADGAVFKTKVLIGCDGVNS-----------VVAKWLGFK 171 (409)
Q Consensus 136 ---~~~~~v~~~~g~~~~ad~vV~AdG~~s-----------~vr~~lg~~ 171 (409)
++.+.|++.++ +++||.||+|+|.+| .+.+.+|..
T Consensus 140 ~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 140 NDEKVRFVLQVNST-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp SCSSCCEEEEETTE-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCC
T ss_pred CcCCCeEEEEECCC-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCC
Confidence 56688888777 799999999999999 456666655
No 54
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.45 E-value=3.7e-13 Score=125.22 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=86.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+|||||++|+++|+.|+++|++|+|||+.+.+...... .++ .........
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~---------------~~~----------~~~~~~~~~ 56 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH---------------AWH----------SLHLFSPAG 56 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG---------------SCT----------TCBCSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC---------------CCC----------CcEecCchh
Confidence 3589999999999999999999999999999998765322110 000 000000000
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEE-EEEcCCCEEecCEEEEcCC
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKL-VNLADGAVFKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~-v~~~~g~~~~ad~vV~AdG 159 (409)
......+... ........+..+.+.+.+.+ .+++++++++|++++.+++.+. |++.++ ++.+|.||.|+|
T Consensus 57 ~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG 129 (357)
T 4a9w_A 57 WSSIPGWPMP------ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATG 129 (357)
T ss_dssp GSCCSSSCCC------CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCC
T ss_pred hhhCCCCCCC------CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCC
Confidence 0000000111 11112355677777776543 2678999999999999999999 998888 799999999999
Q ss_pred CchH
Q 015331 160 VNSV 163 (409)
Q Consensus 160 ~~s~ 163 (409)
.+|.
T Consensus 130 ~~~~ 133 (357)
T 4a9w_A 130 TWGE 133 (357)
T ss_dssp SGGG
T ss_pred CCCC
Confidence 8773
No 55
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.44 E-value=1.4e-12 Score=109.05 Aligned_cols=116 Identities=25% Similarity=0.343 Sum_probs=85.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....... .+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~--------------------------~~------------ 43 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS--------------------------RV------------ 43 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS--------------------------CC------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch--------------------------hh------------
Confidence 6999999999999999999999999999998863211000 00
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
.. ++.. + ..+....+.+.+.+.+ .+++++++ +|++++.+++.+.|++.+| ++.+|+||.|+|..+
T Consensus 44 --~~--~~~~----~---~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 44 --PN--YPGL----L---DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp --CC--STTC----T---TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCC
T ss_pred --hc--cCCC----c---CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCC
Confidence 00 0000 0 0133455666655544 26899999 9999998877888998888 899999999999999
Q ss_pred HhHhHhCCC
Q 015331 163 VVAKWLGFK 171 (409)
Q Consensus 163 ~vr~~lg~~ 171 (409)
.+++.+|++
T Consensus 111 ~~~~~~g~~ 119 (180)
T 2ywl_A 111 TLPSLLGLT 119 (180)
T ss_dssp HHHHHHTCC
T ss_pred CccccCCCC
Confidence 887777654
No 56
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.44 E-value=4e-12 Score=121.32 Aligned_cols=58 Identities=14% Similarity=0.142 Sum_probs=44.8
Q ss_pred HHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEE-EEEcCCCEEecCEEEEcCCCchHhHhHh
Q 015331 109 LLMEALERELP--SGTIRYSSKVVSVEESGLFKL-VNLADGAVFKTKVLIGCDGVNSVVAKWL 168 (409)
Q Consensus 109 ~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~-v~~~~g~~~~ad~vV~AdG~~s~vr~~l 168 (409)
.+.+.|.+.+. +++|+++++|++|..++++++ |++. |++++||.||.|.|.+... +.+
T Consensus 197 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~-~ll 257 (425)
T 3ka7_A 197 GIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATA-VLC 257 (425)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHH-HHT
T ss_pred HHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHH-Hhc
Confidence 35555555442 689999999999999888876 6664 7789999999999987654 344
No 57
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.42 E-value=2e-12 Score=116.35 Aligned_cols=132 Identities=20% Similarity=0.238 Sum_probs=87.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc-CCceEEEeCCCccCCcc-------eeEEechhHHHHHHHcCCchHHHhhcccccCe
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL-GIRSLVLESSESLRVTG-------FAITLWTNAWRALDAVGISDSLRQQHIQLQGM 75 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~-g~~V~v~E~~~~~~~~~-------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 75 (409)
++||+|||||++|+++|+.|+++ |.+|+|+|+.+.+.... ....+.....++++++|+.-.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~----------- 107 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYD----------- 107 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCE-----------
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcc-----------
Confidence 57999999999999999999997 99999999987653210 112222334445554443210
Q ss_pred EEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeCCeE-EEEEc-------
Q 015331 76 VVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESGLFK-LVNLA------- 144 (409)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~~~~-~v~~~------- 144 (409)
. .+ .+ ....+...+...|.+.+ .+++++++++|+++..+++.+ .|.+.
T Consensus 108 ---~--~~---------------~~-~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~ 166 (284)
T 1rp0_A 108 ---E--QD---------------TY-VVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQN 166 (284)
T ss_dssp ---E--CS---------------SE-EEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTC
T ss_pred ---c--CC---------------CE-EEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccc
Confidence 0 00 00 00124556666665543 368999999999999887754 34332
Q ss_pred --CC-----CEEecCEEEEcCCCchHhHhH
Q 015331 145 --DG-----AVFKTKVLIGCDGVNSVVAKW 167 (409)
Q Consensus 145 --~g-----~~~~ad~vV~AdG~~s~vr~~ 167 (409)
++ .++.||.||+|+|.+|.++..
T Consensus 167 ~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 167 HHTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp TTTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred cCccccCceEEEECCEEEECCCCchHHHHH
Confidence 22 478999999999999877544
No 58
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.42 E-value=1.5e-12 Score=126.78 Aligned_cols=161 Identities=17% Similarity=0.208 Sum_probs=88.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCch--HH--Hhhcc-cccCeEEE
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISD--SL--RQQHI-QLQGMVVA 78 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~--~~--~~~~~-~~~~~~~~ 78 (409)
++||+||||||+|+++|+.|++.|++|+|||+.+.+....+ ..........+.. .+ ...+. .+......
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~------~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~ 180 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTK------DTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLY 180 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHH------HHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCccccccc------chhcccccccccccccceeccCCcccccCCceE
Confidence 37999999999999999999999999999999875421100 0000011100000 00 00000 00000000
Q ss_pred eccCCccc---------cccccc--ccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeE-EEEEc
Q 015331 79 SSVSCQPA---------SEISFK--TKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFK-LVNLA 144 (409)
Q Consensus 79 ~~~~~~~~---------~~~~~~--~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~-~v~~~ 144 (409)
........ .....+ ......+.. .......+.+.|.+.+ .+++++++++|+++..+++.+ .|++.
T Consensus 181 ~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~-G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~ 259 (549)
T 3nlc_A 181 SQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHI-GTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS 259 (549)
T ss_dssp CCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCC-CHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEET
T ss_pred EEeccccccHHHHHHHHHHcCCCceEeecccccc-ccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEEC
Confidence 00000000 000000 000000010 0123355666665544 378999999999999887754 48899
Q ss_pred CCCEEecCEEEEcCCCchH----hHhHhCCC
Q 015331 145 DGAVFKTKVLIGCDGVNSV----VAKWLGFK 171 (409)
Q Consensus 145 ~g~~~~ad~vV~AdG~~s~----vr~~lg~~ 171 (409)
+|+++.||.||+|+|.+|. ..+..|+.
T Consensus 260 ~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 260 NGEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp TSCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred CCCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 9999999999999999994 34455655
No 59
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.41 E-value=6.3e-13 Score=122.70 Aligned_cols=124 Identities=18% Similarity=0.257 Sum_probs=85.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++++||+||||||+|+++|+.|+++|++|+|||+++.+... . . .. .+ ....+..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~----------~--~-~~----------~~--~~~~~~~ 56 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQ----------L--T-AL----------YP--EKYIYDV 56 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHH----------H--H-HT----------CT--TSEECCS
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCe----------e--e-cc----------CC--Cceeecc
Confidence 345689999999999999999999999999999998753210 0 0 00 00 0001000
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
. .. ..+.+.++.+.+.+.+. +++++++++|..++.+++.+.|.+.++.++.+|.||.|+
T Consensus 57 -----------~------~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~At 117 (335)
T 2zbw_A 57 -----------A------GF--PKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAA 117 (335)
T ss_dssp -----------T------TC--SSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECC
T ss_pred -----------C------CC--CCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECC
Confidence 0 00 02334556666655432 578899999999998888888999888889999999999
Q ss_pred CCchHhHhHh
Q 015331 159 GVNSVVAKWL 168 (409)
Q Consensus 159 G~~s~vr~~l 168 (409)
|..|...+..
T Consensus 118 G~~~~~p~~~ 127 (335)
T 2zbw_A 118 GVGAFEPRRI 127 (335)
T ss_dssp TTSEEEECCC
T ss_pred CCCCCCCCCC
Confidence 9976444433
No 60
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.41 E-value=2e-12 Score=123.32 Aligned_cols=58 Identities=26% Similarity=0.330 Sum_probs=44.7
Q ss_pred HHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchHhHhHhC
Q 015331 109 LLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSVVAKWLG 169 (409)
Q Consensus 109 ~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 169 (409)
.+.+.|.+.+ .+++|+++++|++|+.+++++ | ..+|+++.||.||.|.|.+... +.++
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH-HhcC
Confidence 4455555544 268999999999999888888 6 5677789999999999987653 4554
No 61
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.40 E-value=1.7e-11 Score=126.54 Aligned_cols=169 Identities=20% Similarity=0.197 Sum_probs=96.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCccC---Ccc--eeEEec-----------hhHHHHHHHcCCch
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSESLR---VTG--FAITLW-----------TNAWRALDAVGISD 63 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~~~---~~~--~~~~~~-----------~~~~~~l~~~gl~~ 63 (409)
|.+++||+|||||++|+++|+.|+++|+ +|+|||++..+. ..+ .+.... ..+.+.++++. +
T Consensus 1 m~~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~--~ 78 (830)
T 1pj5_A 1 MASTPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLT--E 78 (830)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCE--E
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHH--h
Confidence 6677999999999999999999999998 999999987531 111 122211 12223333331 0
Q ss_pred HHHhhcccccCeEEEeccC----------------Cccccccc-------ccccC---C---CCCccccccCHHHHHHHH
Q 015331 64 SLRQQHIQLQGMVVASSVS----------------CQPASEIS-------FKTKG---N---RGGHEVRSVKRSLLMEAL 114 (409)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~-------~~~~~---~---~~~~~~~~i~r~~l~~~l 114 (409)
.- .......+........ +.....+. ++... . ........++...+...|
T Consensus 79 ~~-~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L 157 (830)
T 1pj5_A 79 DG-VSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLL 157 (830)
T ss_dssp TT-EESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHH
T ss_pred hC-CCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHH
Confidence 00 0000000000000000 00000000 00000 0 000112246777888888
Q ss_pred HhhC--CCCeEEeCceEEEEEEeCCeE-EEEEcCCCEEecCEEEEcCCCchHh-HhHhCCCCC
Q 015331 115 EREL--PSGTIRYSSKVVSVEESGLFK-LVNLADGAVFKTKVLIGCDGVNSVV-AKWLGFKKP 173 (409)
Q Consensus 115 ~~~~--~~~~i~~~~~v~~v~~~~~~~-~v~~~~g~~~~ad~vV~AdG~~s~v-r~~lg~~~~ 173 (409)
.+.+ .+++++.+++|++++.+++.+ .|.+.+| +++||.||+|+|.+|.. .+.+|...+
T Consensus 158 ~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~p 219 (830)
T 1pj5_A 158 IKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVP 219 (830)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCC
T ss_pred HHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCcc
Confidence 8765 378999999999999887775 5777777 79999999999999964 455565543
No 62
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.39 E-value=5.8e-13 Score=124.30 Aligned_cols=122 Identities=15% Similarity=0.184 Sum_probs=83.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++++||+||||||+|+++|+.|+++|++|+|||+.+.+... . ..+ .+ ....+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~----------~---~~~----------~~--~~~~~~- 64 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQ----------L---AAL----------YP--EKHIYD- 64 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH----------H---HHT----------CT--TSEECC-
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc----------c---ccc----------CC--Cccccc-
Confidence 445689999999999999999999999999999998753210 0 000 00 000000
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCC-eEEEEEcCCCEEecCEEEEc
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGL-FKLVNLADGAVFKTKVLIGC 157 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~-~~~v~~~~g~~~~ad~vV~A 157 (409)
.. ....+.+..+.+.|.+.+. +++++++++|+.++..++ .+.|++.++.++.+|.||+|
T Consensus 65 ----------~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~A 126 (360)
T 3ab1_A 65 ----------VA--------GFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIA 126 (360)
T ss_dssp ----------ST--------TCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEEC
T ss_pred ----------CC--------CCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEc
Confidence 00 0001345556666655442 578999999999998765 78899998888999999999
Q ss_pred CCCchHhHh
Q 015331 158 DGVNSVVAK 166 (409)
Q Consensus 158 dG~~s~vr~ 166 (409)
+|..|...+
T Consensus 127 tG~~~~~~~ 135 (360)
T 3ab1_A 127 AGLGAFEPR 135 (360)
T ss_dssp CTTCSCCBC
T ss_pred cCCCcCCCC
Confidence 999765433
No 63
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.39 E-value=2.2e-12 Score=117.30 Aligned_cols=132 Identities=22% Similarity=0.237 Sum_probs=85.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCc-------ceeEEechhHHHHHHHcCCchHHHhhcccccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVT-------GFAITLWTNAWRALDAVGISDSLRQQHIQLQG 74 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~ 74 (409)
++||+||||||+|+++|+.|+++ |++|+|+|+.+.+... .....+.+...++|+++|+.-.-
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~--------- 149 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYED--------- 149 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEE---------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccc---------
Confidence 58999999999999999999997 9999999998765311 11222345556677766653110
Q ss_pred eEEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeCC--------------
Q 015331 75 MVVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESGL-------------- 137 (409)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~~-------------- 137 (409)
.+. + ....+...+.+.|.+.+ +++++++++.|+++..+++
T Consensus 150 -------~G~----~------------~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~ 206 (344)
T 3jsk_A 150 -------EGD----Y------------VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAE 206 (344)
T ss_dssp -------CSS----E------------EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------------
T ss_pred -------cCC----e------------EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccc
Confidence 000 0 00112344555555433 4789999999999876542
Q ss_pred -----eE-EEEE------c--------CCCEEecCEEEEcCCCchHhHhH
Q 015331 138 -----FK-LVNL------A--------DGAVFKTKVLIGCDGVNSVVAKW 167 (409)
Q Consensus 138 -----~~-~v~~------~--------~g~~~~ad~vV~AdG~~s~vr~~ 167 (409)
.+ .|.+ . +..+++|++||+|||..|++++.
T Consensus 207 ~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~ 256 (344)
T 3jsk_A 207 DEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAF 256 (344)
T ss_dssp --CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCH
T ss_pred cCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHH
Confidence 21 1222 1 22479999999999999985443
No 64
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.38 E-value=1.7e-12 Score=113.20 Aligned_cols=128 Identities=15% Similarity=0.084 Sum_probs=84.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+|||||++|+.+|+.|++.|.+|+|||+..... + ....+.. .++. .
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~--G--~~~~~~~------~~~~-------------------~ 52 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV--M--MPFLPPK------PPFP-------------------P 52 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT--T--CCSSCCC------SCCC-------------------T
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC--C--cccCccc------cccc-------------------h
Confidence 36899999999999999999999999999999984311 1 0011100 0000 0
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeCCeE-EEEEcCCCEEecCEEEEcC
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESGLFK-LVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~~~~-~v~~~~g~~~~ad~vV~Ad 158 (409)
......+. . . . .+ ++..+.+.|.+.+ ++++++ +++|+++..+++.+ .|.+.+|.+++||+||.|+
T Consensus 53 ~~~~~~~~-d--~-~-g~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~ 121 (232)
T 2cul_A 53 GSLLERAY-D--P-K-DE-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAV 121 (232)
T ss_dssp TCHHHHHC-C--T-T-CC-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECC
T ss_pred hhHHhhhc-c--C-C-CC-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECC
Confidence 00000000 0 0 0 00 5667777776654 366777 57999998887764 5888888889999999999
Q ss_pred CCchHhHhHhCC
Q 015331 159 GVNSVVAKWLGF 170 (409)
Q Consensus 159 G~~s~vr~~lg~ 170 (409)
|.+|..+..+|.
T Consensus 122 G~~s~~~~~~G~ 133 (232)
T 2cul_A 122 GSFLGARLFLGG 133 (232)
T ss_dssp TTCSSCEEEETT
T ss_pred CCChhhceecCC
Confidence 999877655554
No 65
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.38 E-value=7.7e-11 Score=114.20 Aligned_cols=54 Identities=11% Similarity=0.109 Sum_probs=42.1
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE---cCCCEEecCEEEEcCCCchH
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL---ADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~---~~g~~~~ad~vV~AdG~~s~ 163 (409)
.+.+.|.+.+ +++|+++++|++|+.+++++.|++ .+|++++||.||.|.+....
T Consensus 239 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 239 VLIDALAASL-GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp HHHHHHHHHH-GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHh-hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 3555565555 468999999999998887888888 67778999999999997753
No 66
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.37 E-value=2.5e-12 Score=123.55 Aligned_cols=155 Identities=15% Similarity=0.130 Sum_probs=88.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhh-cccccC----
Q 015331 2 EEDEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQ-HIQLQG---- 74 (409)
Q Consensus 2 ~~~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-~~~~~~---- 74 (409)
++.+||+||||||+|+++|..|++.|. +|+|||+.+.+..... ...... ..+++....... ..++..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~---~~~~~~---~~~~ip~~~~~~~~~~~~~g~~~ 77 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN---YTSTLS---NKLPVPSTNPILTTEPIVGPAAL 77 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS---CCSCCC---SCCCSSBCCTTCCCCCBCCSSSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec---CCCCCC---ccccccccccccccccccccccc
Confidence 356899999999999999999999999 9999999875432100 000000 000000000000 000000
Q ss_pred ----eEEEeccCCc-ccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcC--
Q 015331 75 ----MVVASSVSCQ-PASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLAD-- 145 (409)
Q Consensus 75 ----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~-- 145 (409)
...+...... ......+...... ......+++..+.++|.+.+. +..++++++|++++..++.|+|++.+
T Consensus 78 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~ 156 (447)
T 2gv8_A 78 PVYPSPLYRDLQTNTPIELMGYCDQSFK-PQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTK 156 (447)
T ss_dssp CBCCCCCCTTCBCSSCHHHHSCTTCCCC-TTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESS
T ss_pred CCccCchhhhhccCCCHHHhccCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecC
Confidence 0000000000 0000011110000 011124667888887776543 45789999999999998889998876
Q ss_pred -CC---EEecCEEEEcCCCchH
Q 015331 146 -GA---VFKTKVLIGCDGVNSV 163 (409)
Q Consensus 146 -g~---~~~ad~vV~AdG~~s~ 163 (409)
|+ ++.+|.||+|+|.+|.
T Consensus 157 ~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 157 AGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp TTCCEEEEEESEEEECCCSSSS
T ss_pred CCCeeEEEEeCEEEECCCCCCC
Confidence 66 7999999999999763
No 67
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.37 E-value=1.4e-12 Score=128.00 Aligned_cols=149 Identities=19% Similarity=0.201 Sum_probs=91.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC-ccCCcceeEEech----hHHHHHHHcCC-chHHHhhcccccCeE
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE-SLRVTGFAITLWT----NAWRALDAVGI-SDSLRQQHIQLQGMV 76 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~-~~~~~~~~~~~~~----~~~~~l~~~gl-~~~~~~~~~~~~~~~ 76 (409)
.++||+|||||+||+++|+.|++.|.+|+|+|++. .....+|...+.. ...+.++.++- ...+... .++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~----~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQ----AGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhh----cccc
Confidence 45899999999999999999999999999999985 3333333222211 12222333321 1111110 1122
Q ss_pred EEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeCCeE-EEEEcCCCEEecC
Q 015331 77 VASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESGLFK-LVNLADGAVFKTK 152 (409)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~~~~-~v~~~~g~~~~ad 152 (409)
+......... .. ......+++..+.+.|.+.+ +++++ ++++|+++..+++.+ .|.+.+|.++.||
T Consensus 103 f~~l~~~kgp-av---------~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad 171 (651)
T 3ces_A 103 FRILNASKGP-AV---------RATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAK 171 (651)
T ss_dssp EEEESTTSCG-GG---------CEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEE
T ss_pred hhhhhcccCc-cc---------ccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECC
Confidence 2111110000 00 00112467777777776654 46787 677999998776654 6888888889999
Q ss_pred EEEEcCCCchHhHh
Q 015331 153 VLIGCDGVNSVVAK 166 (409)
Q Consensus 153 ~vV~AdG~~s~vr~ 166 (409)
.||+|+|.+|..+.
T Consensus 172 ~VVLATGt~s~~~~ 185 (651)
T 3ces_A 172 AVVLTVGTFLDGKI 185 (651)
T ss_dssp EEEECCSTTTCCEE
T ss_pred EEEEcCCCCccCcc
Confidence 99999999875443
No 68
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.36 E-value=3.5e-12 Score=125.13 Aligned_cols=147 Identities=16% Similarity=0.143 Sum_probs=91.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC-ccCCcceeEEech-hHHHHHHHc---C-CchHHHhhcccccCeE
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE-SLRVTGFAITLWT-NAWRALDAV---G-ISDSLRQQHIQLQGMV 76 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~-~~~~~~~~~~~~~-~~~~~l~~~---g-l~~~~~~~~~~~~~~~ 76 (409)
.++||+|||||+||+++|+.|++.|.+|+|+|+.. .+...+|...... ....+++++ + +....... .++.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~----~gi~ 95 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDA----TGIQ 95 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHh----cCCc
Confidence 46899999999999999999999999999999985 2333333222211 112333333 2 11111110 1122
Q ss_pred EEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeCCeEE-EEEcCCCEEecC
Q 015331 77 VASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESGLFKL-VNLADGAVFKTK 152 (409)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~~~~~-v~~~~g~~~~ad 152 (409)
+........ .........+++..+.+.|.+.+ ++++++ +.+|+++..+++.+. |.+.+|.++.||
T Consensus 96 f~~l~~~kg----------pav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad 164 (641)
T 3cp8_A 96 FRMLNRSKG----------PAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAK 164 (641)
T ss_dssp EEEECSSSC----------TTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEE
T ss_pred hhhcccccC----------ccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeC
Confidence 211111100 00001122577878887777654 467774 558999988887776 888889899999
Q ss_pred EEEEcCCCchHh
Q 015331 153 VLIGCDGVNSVV 164 (409)
Q Consensus 153 ~vV~AdG~~s~v 164 (409)
.||+|+|.++..
T Consensus 165 ~VVLATG~~s~~ 176 (641)
T 3cp8_A 165 AAILACGTFLNG 176 (641)
T ss_dssp EEEECCTTCBTC
T ss_pred EEEECcCCCCCc
Confidence 999999988653
No 69
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.36 E-value=3e-12 Score=119.55 Aligned_cols=38 Identities=29% Similarity=0.581 Sum_probs=34.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++++||+|||||++|+++|+.|+++|.+|+|+|+...
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 45678999999999999999999999999999998753
No 70
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.36 E-value=7.2e-12 Score=119.81 Aligned_cols=50 Identities=28% Similarity=0.491 Sum_probs=41.0
Q ss_pred HHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCc
Q 015331 110 LMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 110 l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
+.+.+.+.. + +|+++++|++|+.++++++|++.+|++++||.||.|.|..
T Consensus 209 l~~~~~~~~-g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 209 LVDAMSQEI-P-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHTTC-S-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHhhC-C-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 344444443 3 8999999999999888899999999889999999999943
No 71
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.36 E-value=9.3e-11 Score=114.85 Aligned_cols=53 Identities=13% Similarity=0.185 Sum_probs=44.0
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
.+.+.|.+.+ +++|+++++|+.|+.++++++|++.+|+++.||.||.|.+...
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 216 QVSERIMDLL-GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHH-GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred HHHHHHHHHc-CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 3444455444 5689999999999988888999999998999999999999875
No 72
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.33 E-value=5.2e-12 Score=123.48 Aligned_cols=148 Identities=18% Similarity=0.194 Sum_probs=91.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC-ccCCcceeEEec----hhHHHHHHHcC-CchHHHhhcccccCeE
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE-SLRVTGFAITLW----TNAWRALDAVG-ISDSLRQQHIQLQGMV 76 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~-~~~~~~~~~~~~----~~~~~~l~~~g-l~~~~~~~~~~~~~~~ 76 (409)
.++||+|||||+||+.+|+.|++.|.+|+|+|+.. .....+|...+. ....+.++.+| ....+... .++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~----~gi~ 101 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQ----TGIQ 101 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhh----cccc
Confidence 35899999999999999999999999999999985 333333322211 11223333333 22221111 1122
Q ss_pred EEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeCCeE-EEEEcCCCEEecC
Q 015331 77 VASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESGLFK-LVNLADGAVFKTK 152 (409)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~~~~-~v~~~~g~~~~ad 152 (409)
+........ ... ......+++..+.+.|.+.+ +++++ ++++|+++..+++.+ .|.+.+|.++.||
T Consensus 102 f~~l~~~kG-pav---------~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~Ad 170 (637)
T 2zxi_A 102 FKMLNTRKG-KAV---------QSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTK 170 (637)
T ss_dssp EEEESTTSC-GGG---------CEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECS
T ss_pred eeecccccC-ccc---------cchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeC
Confidence 211111000 000 00112467777877777654 46787 578999998877665 5888889899999
Q ss_pred EEEEcCCCchHhH
Q 015331 153 VLIGCDGVNSVVA 165 (409)
Q Consensus 153 ~vV~AdG~~s~vr 165 (409)
.||+|+|.++..+
T Consensus 171 aVVLATG~~s~~~ 183 (637)
T 2zxi_A 171 AVVVTTGTFLNGV 183 (637)
T ss_dssp EEEECCTTCBTCE
T ss_pred EEEEccCCCccCc
Confidence 9999999986543
No 73
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.33 E-value=6.5e-12 Score=124.12 Aligned_cols=162 Identities=15% Similarity=0.182 Sum_probs=90.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCc----ceeEEechhHHHHHHHcCCchHHHhhcccc------
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVT----GFAITLWTNAWRALDAVGISDSLRQQHIQL------ 72 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~------ 72 (409)
.++||+|||||++|+++|+.|+++|.+|+||||.+.+... +.++. .......+.+|+.+........+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~--~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMN--AVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEE--CSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeE--ccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3579999999999999999999999999999999865421 12222 21222333444332211100000
Q ss_pred -c--------------CeEEEeccCCcccccccccccCCCCCcc----ccccCHHHHHHHHHhhC--CCCeEEeCceEEE
Q 015331 73 -Q--------------GMVVASSVSCQPASEISFKTKGNRGGHE----VRSVKRSLLMEALEREL--PSGTIRYSSKVVS 131 (409)
Q Consensus 73 -~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~ 131 (409)
. .+.... ..+.....+... .....+.. ...+....+.+.|.+.+ .+++++++++|++
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~-~~Gv~~~~~~~~-~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~ 275 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLE-SLGANLDDLKRS-GGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVK 275 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHH-HTTCCCCEEECC-TTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHH-hcCCcccccccc-CCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEE
Confidence 0 000000 000000000000 00000000 00133556777776654 3789999999999
Q ss_pred EEEeC-CeEE-EEE--cCCC--EEecCEEEEcCCCchHhHhHh
Q 015331 132 VEESG-LFKL-VNL--ADGA--VFKTKVLIGCDGVNSVVAKWL 168 (409)
Q Consensus 132 v~~~~-~~~~-v~~--~~g~--~~~ad~vV~AdG~~s~vr~~l 168 (409)
+..++ +.+. |.+ .+|+ ++++|.||+|+|.+|..++.+
T Consensus 276 l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 276 LVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 98876 6432 444 3665 689999999999999765443
No 74
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.31 E-value=2.1e-11 Score=110.28 Aligned_cols=110 Identities=19% Similarity=0.205 Sum_probs=79.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|..|+++|++|+|||+.+..... + . ...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~----------------------------~--~-----~~~- 45 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRF----------------------------A--S-----HSH- 45 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGG----------------------------C--S-----CCC-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccccc----------------------------c--h-----hhc-
Confidence 379999999999999999999999999999986521100 0 0 000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCC---CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP---SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~---~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~ 160 (409)
.+. ....+....+.+.+.+.+. ++.+. +++|+.++.+++.+.|.+.+++++.+|.||.|+|.
T Consensus 46 ------~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 46 ------GFL--------GQDGKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp ------SST--------TCTTCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCC
T ss_pred ------CCc--------CCCCCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCC
Confidence 000 0012445666666666543 34444 56999999998899999999999999999999999
Q ss_pred chHh
Q 015331 161 NSVV 164 (409)
Q Consensus 161 ~s~v 164 (409)
.+..
T Consensus 111 ~~~~ 114 (297)
T 3fbs_A 111 TDEL 114 (297)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 7643
No 75
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.29 E-value=8.9e-11 Score=115.81 Aligned_cols=66 Identities=15% Similarity=-0.023 Sum_probs=48.1
Q ss_pred cCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCe-EEEEEc---CCC--EEecCEEEEcCCCchH-hHhHhCC
Q 015331 105 VKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLF-KLVNLA---DGA--VFKTKVLIGCDGVNSV-VAKWLGF 170 (409)
Q Consensus 105 i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~-~~v~~~---~g~--~~~ad~vV~AdG~~s~-vr~~lg~ 170 (409)
++...+...+.+.+ .+++++.+++|+++..+++. +.|++. +++ +++||.||+|+|.+|. +++..+.
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 55666666666544 37899999999999988775 346543 343 6899999999999984 4555554
No 76
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.29 E-value=2.1e-11 Score=120.68 Aligned_cols=158 Identities=13% Similarity=0.109 Sum_probs=87.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCc----ceeEEechhHHHHHHHcCCchHHHhhcccc-------
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVT----GFAITLWTNAWRALDAVGISDSLRQQHIQL------- 72 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~------- 72 (409)
++||+|||||++|+++|+.|+++|.+|+||||.+.+... +.++... .....+++|+.+.........
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~--~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAA--WTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECS--SCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeC--CCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 579999999999999999999999999999998865321 2222221 112334444332211100000
Q ss_pred c--------------CeEEEeccCCcccccccccccCCCCCcccc----ccCHHHHHHHHHhhC--CCCeEEeCceEEEE
Q 015331 73 Q--------------GMVVASSVSCQPASEISFKTKGNRGGHEVR----SVKRSLLMEALEREL--PSGTIRYSSKVVSV 132 (409)
Q Consensus 73 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v 132 (409)
. .+.... ..+.....+... .....+.... ......+.+.|.+.+ .+++++++++|+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~-~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l 281 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMT-AMGADLTDVGMM-GGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEV 281 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH-HTTCCCCEEECC-TTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHH-hcCCCCccCccc-CCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEe
Confidence 0 000000 000000000000 0000000000 022456666666654 37899999999999
Q ss_pred EEeC-CeEE-EEEc--CCC--EEecCEEEEcCCCchHhH
Q 015331 133 EESG-LFKL-VNLA--DGA--VFKTKVLIGCDGVNSVVA 165 (409)
Q Consensus 133 ~~~~-~~~~-v~~~--~g~--~~~ad~vV~AdG~~s~vr 165 (409)
..++ +.+. |.+. +|+ ++.+|.||+|+|.+|..+
T Consensus 282 ~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 282 LKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNN 320 (571)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCH
T ss_pred EEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCH
Confidence 8876 5432 4433 565 689999999999998643
No 77
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.28 E-value=2.8e-11 Score=110.34 Aligned_cols=112 Identities=19% Similarity=0.203 Sum_probs=79.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
+||+||||||+|+++|+.|+++|+ +|+|||++. +... .... . ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~----~~~~-------------------~---~~-------- 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQ----ITGS-------------------S---EI-------- 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCG----GGGC-------------------S---CB--------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcc----cccc-------------------c---cc--------
Confidence 699999999999999999999999 999999852 1110 0000 0 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.. ++. ....+++..+.+.+.+.+ .++++++ ++|.+++.+++.+.|.+.++.++.+|.||+|+|.+
T Consensus 47 ---~~--~~~-------~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 47 ---EN--YPG-------VKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp ---CC--STT-------CCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEE
T ss_pred ---cc--CCC-------CcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCC
Confidence 00 000 001356666776665543 2578877 79999998888888988888899999999999987
Q ss_pred hHh
Q 015331 162 SVV 164 (409)
Q Consensus 162 s~v 164 (409)
+..
T Consensus 114 ~~~ 116 (311)
T 2q0l_A 114 PKR 116 (311)
T ss_dssp ECC
T ss_pred CCC
Confidence 643
No 78
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.27 E-value=3e-11 Score=109.19 Aligned_cols=133 Identities=18% Similarity=0.196 Sum_probs=83.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCc-------ceeEEechhHHHHHHHcCCchHHHhhcccccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVT-------GFAITLWTNAWRALDAVGISDSLRQQHIQLQG 74 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~ 74 (409)
++||+||||||+|+++|+.|+++ |.+|+|+|+.+.+... .....+.+.....|+++|+.-.
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~---------- 134 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE---------- 134 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCE----------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccc----------
Confidence 46999999999999999999998 9999999998765321 1122233444555555543211
Q ss_pred eEEEeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhC---CCCeEEeCceEEEEEEeC----C--eE-EEEEc
Q 015331 75 MVVASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL---PSGTIRYSSKVVSVEESG----L--FK-LVNLA 144 (409)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~---~~~~i~~~~~v~~v~~~~----~--~~-~v~~~ 144 (409)
. .+. .....+...+...|.+.+ ++++++.+++|+++..++ + .+ .|.+.
T Consensus 135 ----~--~g~----------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~ 192 (326)
T 2gjc_A 135 ----D--EGD----------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTN 192 (326)
T ss_dssp ----E--CSS----------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEE
T ss_pred ----c--CCC----------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEec
Confidence 0 000 000113345566665543 478999999999998763 2 22 23221
Q ss_pred --------------CCCEEec---------------CEEEEcCCCchHhHhHh
Q 015331 145 --------------DGAVFKT---------------KVLIGCDGVNSVVAKWL 168 (409)
Q Consensus 145 --------------~g~~~~a---------------d~vV~AdG~~s~vr~~l 168 (409)
++.++.| ++||+|+|..+++.+++
T Consensus 193 ~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 193 WTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp EHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred ceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 3346889 99999999998875554
No 79
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.26 E-value=1.5e-10 Score=112.18 Aligned_cols=53 Identities=17% Similarity=0.122 Sum_probs=40.7
Q ss_pred HHHHHHhhCC--CCeEEeCceEEEEEEeCCe-EEEEEcCCCEEecCEEEEcCCCchH
Q 015331 110 LMEALERELP--SGTIRYSSKVVSVEESGLF-KLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 110 l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~-~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+.+.|.+.+. +++|+++++|++|+.++++ +.|++ ++.++.||.||.|.+.+..
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 4555555442 6799999999999988766 88876 4557999999999987543
No 80
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.26 E-value=3.3e-11 Score=110.29 Aligned_cols=113 Identities=20% Similarity=0.215 Sum_probs=76.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|+.++||+||||||+|+++|+.|+++|++|+|||+.. +... .... . ..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~---~~~~--------------------~---~~----- 60 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGL---TAEA--------------------P---LV----- 60 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGG---GGGC--------------------S---CB-----
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCcc---cccc--------------------c---hh-----
Confidence 4456899999999999999999999999999999843 1110 0000 0 00
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
. .++ .. ..+.+..+.+.+.+.+. ++++++ .+|..++.+++.+.|.+ ++.++.+|.||+|+
T Consensus 61 ------~--~~~------~~--~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~At 122 (319)
T 3cty_A 61 ------E--NYL------GF--KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITT 122 (319)
T ss_dssp ------C--CBT------TB--SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECC
T ss_pred ------h--hcC------CC--cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECC
Confidence 0 000 00 12444555555554332 567777 78999998888888877 56689999999999
Q ss_pred CCchH
Q 015331 159 GVNSV 163 (409)
Q Consensus 159 G~~s~ 163 (409)
|..+.
T Consensus 123 G~~~~ 127 (319)
T 3cty_A 123 GTTHK 127 (319)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 98764
No 81
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.26 E-value=2.3e-11 Score=111.37 Aligned_cols=110 Identities=20% Similarity=0.223 Sum_probs=77.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+|||||++|+++|+.|+++|++|+|||++ +...... .....
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~----------------------------~~~~~----- 59 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE----------------------------AGIVD----- 59 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG----------------------------CCEEC-----
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc----------------------------ccccc-----
Confidence 479999999999999999999999999999987 2111000 00000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.++ ... .+....+.+.+.+.+ .++++++ ++|.+++.+++.+.|.+.++.++.+|.||.|+|..
T Consensus 60 ------~~~------~~~--~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 60 ------DYL------GLI--EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp ------CST------TST--TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred ------ccC------CCC--CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 000 000 134455666655433 2678888 89999999888899999998899999999999987
Q ss_pred hH
Q 015331 162 SV 163 (409)
Q Consensus 162 s~ 163 (409)
+.
T Consensus 125 ~~ 126 (323)
T 3f8d_A 125 RR 126 (323)
T ss_dssp EC
T ss_pred Cc
Confidence 53
No 82
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.25 E-value=4e-10 Score=109.93 Aligned_cols=64 Identities=19% Similarity=0.318 Sum_probs=47.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCccee------------EEe---chhHHHHHHHcCCchH
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFA------------ITL---WTNAWRALDAVGISDS 64 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~------------~~~---~~~~~~~l~~~gl~~~ 64 (409)
|.+.+||+|||||++||++|+.|+++|++|+|+|+.+.++..... ..+ .+...++++++|+.+.
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 445689999999999999999999999999999999875432111 011 2457788899987643
No 83
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.25 E-value=5e-11 Score=108.36 Aligned_cols=111 Identities=20% Similarity=0.258 Sum_probs=69.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 2 EEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 2 ~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
|++|||+||||||||+++|+.|+++|++|+|||++... +. +.. . ..+
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~g---g~----------------~~~----~---~~~------- 50 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNR---NR----------------VTQ----N---SHG------- 50 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCG---GG----------------GSS----C---BCC-------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC---Ce----------------eee----e---cCC-------
Confidence 46799999999999999999999999999999986421 10 000 0 000
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEE-eCCeEEEEEcCCCEEecCEEEEcC
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEE-SGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~-~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
+. ... .+...++.+...+.+. +...+....+..+.. .++.++|.+.+++++++|.||.|+
T Consensus 51 ---------~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiAT 113 (304)
T 4fk1_A 51 ---------FI------TRD--GIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLAT 113 (304)
T ss_dssp ---------ST------TCT--TBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECC
T ss_pred ---------cc------CCC--CCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEcc
Confidence 00 000 1233344444333221 233334445555554 445678999999999999999999
Q ss_pred CCch
Q 015331 159 GVNS 162 (409)
Q Consensus 159 G~~s 162 (409)
|...
T Consensus 114 Gs~p 117 (304)
T 4fk1_A 114 GMQE 117 (304)
T ss_dssp CCEE
T ss_pred CCcc
Confidence 9754
No 84
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.25 E-value=2.6e-11 Score=118.63 Aligned_cols=133 Identities=19% Similarity=0.291 Sum_probs=85.4
Q ss_pred CCcEEEECCCHHHHHHHHHHH-HcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALH-RLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~-~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
++||+|||||++|+++|+.|+ +.|++|+|||+.+.+..... .. ...+........
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~-------------~~-----------~ypg~~~d~~s~ 63 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWY-------------WN-----------RYPGALSDTESH 63 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHH-------------HC-----------CCTTCEEEEEGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccc-------------cc-----------CCCCceecCCcc
Confidence 479999999999999999999 89999999999875432100 00 000110000000
Q ss_pred CcccccccccccC-CCCCccccccCHHHHHHHHHhhCC--CC--eEEeCceEEEEEEeCC--eEEEEEcCCCEEecCEEE
Q 015331 83 CQPASEISFKTKG-NRGGHEVRSVKRSLLMEALERELP--SG--TIRYSSKVVSVEESGL--FKLVNLADGAVFKTKVLI 155 (409)
Q Consensus 83 ~~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~l~~~~~--~~--~i~~~~~v~~v~~~~~--~~~v~~~~g~~~~ad~vV 155 (409)
...+.+.... ..........++.++.+.+.+.+. ++ .++++++|++++.+++ .|+|++.+|+++.||+||
T Consensus 64 ---~~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV 140 (540)
T 3gwf_A 64 ---LYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVV 140 (540)
T ss_dssp ---GSSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEE
T ss_pred ---eeeeccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEE
Confidence 0000000000 000111124567777777665432 44 8999999999998866 899999999999999999
Q ss_pred EcCCCchH
Q 015331 156 GCDGVNSV 163 (409)
Q Consensus 156 ~AdG~~s~ 163 (409)
.|+|..|.
T Consensus 141 ~AtG~~s~ 148 (540)
T 3gwf_A 141 NAVGLLSA 148 (540)
T ss_dssp ECCCSCCS
T ss_pred ECCccccc
Confidence 99998663
No 85
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.25 E-value=1.6e-10 Score=112.40 Aligned_cols=54 Identities=19% Similarity=0.087 Sum_probs=43.1
Q ss_pred HHHHHHHhhCC--C-CeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 109 LLMEALERELP--S-GTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 109 ~l~~~l~~~~~--~-~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
.+.+.|.+.+. + ++|+++++|++|+.+++.+.|++.+|++++||.||.|.|...
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 34444444432 3 679999999999988888999999998899999999999754
No 86
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.25 E-value=9.9e-12 Score=114.52 Aligned_cols=117 Identities=18% Similarity=0.125 Sum_probs=77.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|+.|+++|++|+|||+.........+. +. . .....
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~------------------~~-----~-~~~~~----- 58 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ------------------LT-----T-TTDVE----- 58 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG------------------GG-----G-CSEEC-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce------------------ee-----e-ccccc-----
Confidence 4799999999999999999999999999999821100000000 00 0 00000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.++. ....+.+..+.+.|.+.+ .+++++.++ |..++.+++.++|.+ ++.++++|.||+|+|.+
T Consensus 59 ------~~~~-------~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 59 ------NFPG-------FPEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp ------CSTT-------CTTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred ------cCCC-------CccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 0000 001244556666665543 267888886 889988877888887 77789999999999998
Q ss_pred hHh
Q 015331 162 SVV 164 (409)
Q Consensus 162 s~v 164 (409)
+..
T Consensus 124 ~~~ 126 (333)
T 1vdc_A 124 AKR 126 (333)
T ss_dssp ECC
T ss_pred cCC
Confidence 643
No 87
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.24 E-value=3.4e-11 Score=110.54 Aligned_cols=113 Identities=19% Similarity=0.287 Sum_probs=76.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+|+++|+.|+++|++|+|||+.. +... .... ...
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~---~~~~-----------------------~~~------- 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQ---IAWS-----------------------EEV------- 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGG---GGGC-----------------------SCB-------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcc---cccc-----------------------ccc-------
Confidence 35799999999999999999999999999999972 2110 0000 000
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEe--CCe-EEEEEcCCCEEecCEEEEc
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEES--GLF-KLVNLADGAVFKTKVLIGC 157 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~--~~~-~~v~~~~g~~~~ad~vV~A 157 (409)
. .++. .. ..+.+..+.+.+.+.+ .++++++ .+|.+++.+ ++. +.|.+.+|.++.+|.||.|
T Consensus 53 ----~--~~~~------~~-~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~A 118 (325)
T 2q7v_A 53 ----E--NFPG------FP-EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILA 118 (325)
T ss_dssp ----C--CSTT------CS-SCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEEC
T ss_pred ----c--cCCC------CC-CCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEEC
Confidence 0 0000 00 0244555666555433 2678877 589999877 444 7788888889999999999
Q ss_pred CCCchH
Q 015331 158 DGVNSV 163 (409)
Q Consensus 158 dG~~s~ 163 (409)
+|..+.
T Consensus 119 tG~~~~ 124 (325)
T 2q7v_A 119 TGADPR 124 (325)
T ss_dssp CCEEEC
T ss_pred cCCCcC
Confidence 998754
No 88
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.23 E-value=1.6e-11 Score=113.19 Aligned_cols=118 Identities=18% Similarity=0.175 Sum_probs=79.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+++||+||||||+|+++|+.|+++|++|+|||+.+.......+ .+.. .....
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg---------------~~~~---------~~~~~---- 72 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGG---------------QLTT---------TTEIE---- 72 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTC---------------GGGG---------SSEEC----
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCc---------------cccc---------chhhc----
Confidence 3579999999999999999999999999999997621111000 0000 00000
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEc---CCCEEecCEEEEc
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLA---DGAVFKTKVLIGC 157 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~---~g~~~~ad~vV~A 157 (409)
.++. ....+.+..+.+.+.+.+ .++++++++ |.+++.+++.+.+.+. ++.++.+|.||.|
T Consensus 73 -------~~~~-------~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlA 137 (338)
T 3itj_A 73 -------NFPG-------FPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILA 137 (338)
T ss_dssp -------CSTT-------CTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEEC
T ss_pred -------ccCC-------CcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEEC
Confidence 0000 001244556666665543 268999998 9999988888888884 6678999999999
Q ss_pred CCCchH
Q 015331 158 DGVNSV 163 (409)
Q Consensus 158 dG~~s~ 163 (409)
+|..+.
T Consensus 138 tG~~~~ 143 (338)
T 3itj_A 138 TGASAK 143 (338)
T ss_dssp CCEEEC
T ss_pred cCCCcC
Confidence 998653
No 89
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.23 E-value=2e-11 Score=119.92 Aligned_cols=133 Identities=19% Similarity=0.217 Sum_probs=84.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+|||||++|+++|+.|++.|++|+|||+.+.+..... .+... +.... ..
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~--------------~~~~p----------g~~~d---~~ 68 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY--------------WNRYP----------GARCD---IE 68 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH--------------HCCCT----------TCBCS---SC
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc--------------ccCCC----------ceeec---cc
Confidence 57999999999999999999999999999999876532100 00000 00000 00
Q ss_pred cccccccccccC-CCCCccccccCHHHHHHHHHh---hCC-CCeEEeCceEEEEEEeCC--eEEEEEcCCCEEecCEEEE
Q 015331 84 QPASEISFKTKG-NRGGHEVRSVKRSLLMEALER---ELP-SGTIRYSSKVVSVEESGL--FKLVNLADGAVFKTKVLIG 156 (409)
Q Consensus 84 ~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~l~~---~~~-~~~i~~~~~v~~v~~~~~--~~~v~~~~g~~~~ad~vV~ 156 (409)
.....+.+.... ...........+.++.++|.+ ++. +..++++++|++++.+++ .|+|++.+|++++||+||.
T Consensus 69 ~~~~~~~f~~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~ 148 (542)
T 1w4x_A 69 SIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIM 148 (542)
T ss_dssp TTTSSCCSCHHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEE
T ss_pred ccccccccChhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEE
Confidence 000000000000 000001124556777766654 332 357999999999988753 7999999998999999999
Q ss_pred cCCCchH
Q 015331 157 CDGVNSV 163 (409)
Q Consensus 157 AdG~~s~ 163 (409)
|+|.+|.
T Consensus 149 AtG~~s~ 155 (542)
T 1w4x_A 149 ASGQLSV 155 (542)
T ss_dssp CCCSCCC
T ss_pred CcCCCCC
Confidence 9998774
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.23 E-value=3.7e-11 Score=117.84 Aligned_cols=132 Identities=20% Similarity=0.226 Sum_probs=84.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+|||||++|+++|+.|++.|++|+|||+.+.+... ...-+.-|+..++...
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGt----------w~~~~ypg~~~dv~s~--------------- 75 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGV----------WYWNRYPGARCDVESI--------------- 75 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH----------HHHCCCTTCBCSSCTT---------------
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----------cccCCCCCceeCCCch---------------
Confidence 479999999999999999999999999999998754321 0000000110000000
Q ss_pred cccccccccccC-CCCCccccccCHHHHHHHHHhhCC--CC--eEEeCceEEEEEEeCC--eEEEEEcCCCEEecCEEEE
Q 015331 84 QPASEISFKTKG-NRGGHEVRSVKRSLLMEALERELP--SG--TIRYSSKVVSVEESGL--FKLVNLADGAVFKTKVLIG 156 (409)
Q Consensus 84 ~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~l~~~~~--~~--~i~~~~~v~~v~~~~~--~~~v~~~~g~~~~ad~vV~ 156 (409)
...+.+.... ..........++.++.+.+.+.+. ++ .++++++|++++.+++ .|+|++.+|+++.||+||.
T Consensus 76 --~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~ 153 (549)
T 4ap3_A 76 --DYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVV 153 (549)
T ss_dssp --TSSCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEE
T ss_pred --hcccccccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEE
Confidence 0000000000 000011124566777777665332 33 8999999999988765 7999999999999999999
Q ss_pred cCCCch
Q 015331 157 CDGVNS 162 (409)
Q Consensus 157 AdG~~s 162 (409)
|+|..|
T Consensus 154 AtG~~s 159 (549)
T 4ap3_A 154 AAGPLS 159 (549)
T ss_dssp CCCSEE
T ss_pred CcCCCC
Confidence 999765
No 91
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.21 E-value=4.4e-11 Score=109.51 Aligned_cols=114 Identities=18% Similarity=0.285 Sum_probs=76.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++++||+||||||+|+++|+.|+++|++|+|||+.. +. +. .. ... ..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g--g~-~~--------------------~~~---~~----- 49 (320)
T 1trb_A 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KG--GQ-LT--------------------TTT---EV----- 49 (320)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TT--GG-GG--------------------GCS---BC-----
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CC--ce-Ee--------------------cch---hh-----
Confidence 3456899999999999999999999999999999642 11 10 00 000 00
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
. . ++. ....+.+..+.+.+.+.+ .++++++++ |..++..++.+++ +.++.++.+|.||.|+
T Consensus 50 -~-----~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~At 112 (320)
T 1trb_A 50 -E-----N--WPG-------DPNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIAT 112 (320)
T ss_dssp -C-----C--STT-------CCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECC
T ss_pred -h-----h--CCC-------CCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECC
Confidence 0 0 000 000234445555554433 267888886 8889887777888 6778889999999999
Q ss_pred CCchH
Q 015331 159 GVNSV 163 (409)
Q Consensus 159 G~~s~ 163 (409)
|..+.
T Consensus 113 G~~~~ 117 (320)
T 1trb_A 113 GASAR 117 (320)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98753
No 92
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.21 E-value=5.5e-11 Score=109.64 Aligned_cols=113 Identities=21% Similarity=0.301 Sum_probs=76.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 2 EEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 2 ~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++++||+||||||+|+++|+.|+++|++|+|||+.. +. + .+. ... ..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g--g-~~~--------------------~~~---~~------ 58 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FG--G-ALM--------------------TTT---DV------ 58 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CS--C-GGG--------------------SCS---CB------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CC--C-cee--------------------ccc---hh------
Confidence 346899999999999999999999999999999652 11 1 000 000 00
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEE-EEcCCCEEecCEEEEcC
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLV-NLADGAVFKTKVLIGCD 158 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v-~~~~g~~~~ad~vV~Ad 158 (409)
. . ++ .....+.+..+.+.+.+.+ .++++++++ |.+++. ++.++| .+.++.++.+|.||.|+
T Consensus 59 ~-----~--~~-------~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAt 122 (335)
T 2a87_A 59 E-----N--YP-------GFRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAM 122 (335)
T ss_dssp C-----C--ST-------TCTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECC
T ss_pred h-----h--cC-------CCCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECC
Confidence 0 0 00 0001244555655555433 267888886 888887 566778 78888889999999999
Q ss_pred CCchH
Q 015331 159 GVNSV 163 (409)
Q Consensus 159 G~~s~ 163 (409)
|..+.
T Consensus 123 G~~~~ 127 (335)
T 2a87_A 123 GAAAR 127 (335)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 98764
No 93
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.20 E-value=4.1e-11 Score=110.15 Aligned_cols=114 Identities=21% Similarity=0.197 Sum_probs=81.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
.+||+|||||++|+++|+.|+++|++|+|||+.+.+... . .. ..+ ......
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~----------~---~~----------~~~--~~~~~~---- 57 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQ----------L---SA----------LYP--EKYIYD---- 57 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH----------H---HH----------HCT--TSEECC----
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce----------e---hh----------cCC--CceEec----
Confidence 479999999999999999999999999999998753210 0 00 000 001100
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCC-eEEEEEcCCCEEecCEEEEcCCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGL-FKLVNLADGAVFKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~-~~~v~~~~g~~~~ad~vV~AdG~ 160 (409)
+. .. ..+...++...+.+.+. +++++++++|++++..++ .+.|.+.+++ +.+|.||.|+|.
T Consensus 58 -------~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 58 -------VA------GF--PKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp -------ST------TC--SSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred -------cC------CC--CCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 00 00 02345666676666543 679999999999998876 7899998886 999999999998
Q ss_pred ch
Q 015331 161 NS 162 (409)
Q Consensus 161 ~s 162 (409)
.+
T Consensus 122 ~~ 123 (332)
T 3lzw_A 122 GA 123 (332)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 94
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.20 E-value=7e-11 Score=109.72 Aligned_cols=34 Identities=29% Similarity=0.505 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC------CceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLG------IRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g------~~V~v~E~~~~ 38 (409)
+||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 49999999999999999999998 99999999864
No 95
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.19 E-value=4e-11 Score=117.46 Aligned_cols=133 Identities=18% Similarity=0.218 Sum_probs=83.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+|||||++|+++|+.|++.|++|+|||+++.+... . .. +.. .+... ...
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGt----------w---~~-~~y----------Pg~~~---d~~ 61 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGT----------W---YW-NRY----------PGCRL---DTE 61 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH----------H---HH-CCC----------TTCBC---SSC
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc----------c---cc-CCC----------Cceee---cCc
Confidence 579999999999999999999999999999998764321 0 00 000 00000 000
Q ss_pred cccccccccccC-CCCCccccccCHHHHHHHHHhhCC--CC--eEEeCceEEEEEEeC--CeEEEEEcCCCEEecCEEEE
Q 015331 84 QPASEISFKTKG-NRGGHEVRSVKRSLLMEALERELP--SG--TIRYSSKVVSVEESG--LFKLVNLADGAVFKTKVLIG 156 (409)
Q Consensus 84 ~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~l~~~~~--~~--~i~~~~~v~~v~~~~--~~~~v~~~~g~~~~ad~vV~ 156 (409)
.....+.+.... ...........+.++.+.+.+.+. +. .++++++|++++.++ +.|+|++.+|++++||+||.
T Consensus 62 ~~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~ 141 (545)
T 3uox_A 62 SYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLIS 141 (545)
T ss_dssp HHHHCHHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEE
T ss_pred hhhcccccCcccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEE
Confidence 000000000000 000111124556667666655332 33 789999999998765 47999999998999999999
Q ss_pred cCCCchH
Q 015331 157 CDGVNSV 163 (409)
Q Consensus 157 AdG~~s~ 163 (409)
|+|..|.
T Consensus 142 AtG~~s~ 148 (545)
T 3uox_A 142 ATGPLSA 148 (545)
T ss_dssp CCCSCBC
T ss_pred CcCCCCC
Confidence 9997653
No 96
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.19 E-value=6.4e-11 Score=108.06 Aligned_cols=119 Identities=21% Similarity=0.238 Sum_probs=75.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++.|||+||||||||+++|+.|+++|++|+|||+.........+ .+ +. ...+...
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G------------------~~-----~~-~~~i~~~ 56 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGG------------------QL-----TT-TTIIENF 56 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTC------------------GG-----GG-SSEECCS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCC------------------Cc-----CC-hHHhhhc
Confidence 888899999999999999999999999999999987532111000 00 00 0001000
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
. .++ ..+...++.+.+.+.+. +..+. ...+.......+...+.+.++.++.+|.||.|+
T Consensus 57 -~-------g~~----------~~i~~~~l~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiAT 117 (314)
T 4a5l_A 57 -P-------GFP----------NGIDGNELMMNMRTQSEKYGTTII-TETIDHVDFSTQPFKLFTEEGKEVLTKSVIIAT 117 (314)
T ss_dssp -T-------TCT----------TCEEHHHHHHHHHHHHHHTTCEEE-CCCEEEEECSSSSEEEEETTCCEEEEEEEEECC
T ss_pred -c-------CCc----------ccCCHHHHHHHHHHHHhhcCcEEE-EeEEEEeecCCCceEEEECCCeEEEEeEEEEcc
Confidence 0 000 02334445444443331 34444 445666666667777888888899999999999
Q ss_pred CCch
Q 015331 159 GVNS 162 (409)
Q Consensus 159 G~~s 162 (409)
|...
T Consensus 118 G~~~ 121 (314)
T 4a5l_A 118 GATA 121 (314)
T ss_dssp CEEE
T ss_pred cccc
Confidence 9754
No 97
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.19 E-value=9e-11 Score=113.02 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=83.8
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCc---eEEEeCCCccCCcceeEEechh-HHHHHHHcCCchHHHhhcccccCeEE
Q 015331 5 EDIVIVGAGIAGLTTSLALHR---LGIR---SLVLESSESLRVTGFAITLWTN-AWRALDAVGISDSLRQQHIQLQGMVV 77 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~---~g~~---V~v~E~~~~~~~~~~~~~~~~~-~~~~l~~~gl~~~~~~~~~~~~~~~~ 77 (409)
+||+||||||+|+++|..|++ .|++ |+|||+.+.++.... .... + ....|+.. ..........
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~---~~~~~g---~~~~g~~~----~~~~y~~l~~ 72 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN---YTWRTG---LDENGEPV----HSSMYRYLWS 72 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS---CCSCCS---BCTTSSBC----CCCCCTTCBC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee---cCCCCC---ccccCCCC----cCccccchhh
Confidence 699999999999999999999 9999 999999876432100 0000 0 00001000 0000000000
Q ss_pred EeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCe--EEeCceEEEEEEeCC--eEEEEEcC---C--
Q 015331 78 ASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGT--IRYSSKVVSVEESGL--FKLVNLAD---G-- 146 (409)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~--i~~~~~v~~v~~~~~--~~~v~~~~---g-- 146 (409)
...........+.++.... ......+++..+.+.|.+.+. ++. ++++++|+.++..++ .|+|++.+ |
T Consensus 73 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~ 150 (464)
T 2xve_A 73 NGPKECLEFADYTFDEHFG--KPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTI 150 (464)
T ss_dssp SSCGGGTCBTTBCHHHHHS--SCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEE
T ss_pred cCChhhcccCCCCCCcccC--CCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCce
Confidence 0000000000111110000 001224677888877776543 455 899999999998876 78888765 3
Q ss_pred CEEecCEEEEcCCCchH
Q 015331 147 AVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 147 ~~~~ad~vV~AdG~~s~ 163 (409)
.++.+|.||+|+|.+|.
T Consensus 151 ~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 151 YSEEFDYVVCCTGHFST 167 (464)
T ss_dssp EEEEESEEEECCCSSSS
T ss_pred EEEEcCEEEECCCCCCC
Confidence 46899999999997654
No 98
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.18 E-value=9.3e-11 Score=109.57 Aligned_cols=135 Identities=13% Similarity=0.195 Sum_probs=80.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
++||+|||||++|+++|+.|++.|+ +|+|||+++ +... +... ... ....... +....-
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~-------------~~~~--~~~----~~~~~~~-~~~~~~ 62 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHS-------------FKHW--PKS----TRTITPS-FTSNGF 62 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHH-------------HHTS--CTT----CBCSSCC-CCCGGG
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCc-------------cccC--ccc----ccccCcc-hhcccC
Confidence 5899999999999999999999999 999999886 2210 0000 000 0000000 000000
Q ss_pred CcccccccccccCCCC--CccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 83 CQPASEISFKTKGNRG--GHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~--~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
+. ..+......... ......+.+..+.+.+.+.+ .+++++++++|.+++.+++.+.|.+.++ ++.+|.||.|+
T Consensus 63 g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAt 139 (369)
T 3d1c_A 63 GM--PDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVAT 139 (369)
T ss_dssp TC--CCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECC
T ss_pred Cc--hhhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECC
Confidence 00 000000000000 00011345556666554432 2688999999999998877888988877 58999999999
Q ss_pred CCch
Q 015331 159 GVNS 162 (409)
Q Consensus 159 G~~s 162 (409)
|.++
T Consensus 140 G~~~ 143 (369)
T 3d1c_A 140 GDYN 143 (369)
T ss_dssp CSTT
T ss_pred CCCC
Confidence 9876
No 99
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.16 E-value=3e-10 Score=115.22 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=42.2
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCc
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.+.+.|.+ +++|+++++|++|+.++++++|++.+|+++.||.||.|....
T Consensus 535 ~l~~aLa~---gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 535 VIIEKLAE---GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp HHHHHHHT---TSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred HHHHHHHh---CCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 45555554 568999999999999988999999999899999999999643
No 100
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.14 E-value=3.2e-10 Score=110.55 Aligned_cols=38 Identities=37% Similarity=0.594 Sum_probs=34.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
.++||||||||++||++|+.|+++|.+|+|+||.+.+.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~G 77 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWG 77 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 35799999999999999999999999999999998653
No 101
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.13 E-value=1.3e-10 Score=105.74 Aligned_cols=111 Identities=23% Similarity=0.299 Sum_probs=76.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+||||||+|+++|..|+++|++|+|+|+... +. .. . ..... .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g----G~--~~--------------~----------~~~~~---~- 46 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG----GQ--IL--------------D----------TVDIE---N- 46 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT----GG--GG--------------G----------CCEEC---C-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC----ce--ec--------------c----------ccccc---c-
Confidence 47999999999999999999999999999985321 10 00 0 00000 0
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeC---CeEEEEEcCCCEEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESG---LFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~---~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
+. ......+..+.+.+.+.+ .+++++++++|..++.+. +.+.|.+.++.++.+|.||.|+
T Consensus 47 -------~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~At 111 (310)
T 1fl2_A 47 -------YI--------SVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVAT 111 (310)
T ss_dssp -------BT--------TBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECC
T ss_pred -------cc--------CcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECc
Confidence 00 000123445555554433 267899999999997653 3688999888889999999999
Q ss_pred CCchH
Q 015331 159 GVNSV 163 (409)
Q Consensus 159 G~~s~ 163 (409)
|..+.
T Consensus 112 G~~~~ 116 (310)
T 1fl2_A 112 GAKWR 116 (310)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98764
No 102
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.12 E-value=4.4e-10 Score=108.43 Aligned_cols=146 Identities=16% Similarity=0.160 Sum_probs=82.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-----CceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEE
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLG-----IRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVA 78 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g-----~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
.+||+||||||+|+++|..|+++| .+|+|||+.+.+..... ..+....+. .....++.....+.....+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~-~~~~~~~~~----~~~~~~l~~~~~p~~~~~~~ 104 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGN-TLVSQSELQ----ISFLKDLVSLRNPTSPYSFV 104 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGG-GCCSSCBCS----SCTTSSSSTTTCTTCTTSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCC-CCCCCCcCC----cchhhccccccCCCCCCChh
Confidence 469999999999999999999999 99999999986542110 000000000 00000000000000000000
Q ss_pred e--ccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEe---CCe--EEEEEcCCC--
Q 015331 79 S--SVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEES---GLF--KLVNLADGA-- 147 (409)
Q Consensus 79 ~--~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~---~~~--~~v~~~~g~-- 147 (409)
. ...+. ...+. ........+..+.+++...+. ++.++++++|++++.. ++. ++|++.++.
T Consensus 105 ~~l~~~~~---~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~ 175 (463)
T 3s5w_A 105 NYLHKHDR---LVDFI------NLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGE 175 (463)
T ss_dssp HHHHHTTC---HHHHH------HHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSC
T ss_pred HhhhhcCc---eeecc------cccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCc
Confidence 0 00000 00000 001123567777777765443 4789999999999876 444 367777775
Q ss_pred --EEecCEEEEcCCCchH
Q 015331 148 --VFKTKVLIGCDGVNSV 163 (409)
Q Consensus 148 --~~~ad~vV~AdG~~s~ 163 (409)
++.+|.||+|+|..+.
T Consensus 176 ~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 176 ELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp EEEEEESEEEECCCCEEC
T ss_pred eEEEEeCEEEECCCCCCC
Confidence 8999999999998543
No 103
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.05 E-value=2.1e-09 Score=106.58 Aligned_cols=162 Identities=12% Similarity=0.101 Sum_probs=86.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC--CceEEEeCCCccCCc----ceeEE--ech-hHH-----HHHHHc-CCc-hHH-
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLG--IRSLVLESSESLRVT----GFAIT--LWT-NAW-----RALDAV-GIS-DSL- 65 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g--~~V~v~E~~~~~~~~----~~~~~--~~~-~~~-----~~l~~~-gl~-~~~- 65 (409)
.++||+|||||++|+++|+.|+++| .+|+|+||.+..... ..++. +.. .+. +.++.- ++. ..+
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 3589999999999999999999999 999999998654221 11221 110 111 111111 111 010
Q ss_pred ---Hhhc-cc-----ccCeEEEeccCCcccccccccccCCCCCccccc---cCHHHHHHHHHhhCC--C-CeEEeCceEE
Q 015331 66 ---RQQH-IQ-----LQGMVVASSVSCQPASEISFKTKGNRGGHEVRS---VKRSLLMEALERELP--S-GTIRYSSKVV 130 (409)
Q Consensus 66 ---~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~r~~l~~~l~~~~~--~-~~i~~~~~v~ 130 (409)
.... .. -.++.+.....+. +.....+......... .....+...|.+.+. + +++++++.|+
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~----~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~ 159 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGS----VNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVL 159 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSS----BCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCc----ccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEE
Confidence 0000 00 0011111101110 0000000000000000 012466777776542 4 8999999999
Q ss_pred EEEEeCCeE---EEE-EcCCC--EEecCEEEEcCCCchHhHhHh
Q 015331 131 SVEESGLFK---LVN-LADGA--VFKTKVLIGCDGVNSVVAKWL 168 (409)
Q Consensus 131 ~v~~~~~~~---~v~-~~~g~--~~~ad~vV~AdG~~s~vr~~l 168 (409)
++..+++.+ .+. +.+|+ ++.|+.||+|+|.+|.++...
T Consensus 160 ~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 160 DILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp EEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred EEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 998877643 222 25665 689999999999999885443
No 104
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.05 E-value=6e-10 Score=110.03 Aligned_cols=37 Identities=30% Similarity=0.528 Sum_probs=34.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
.+||+|||||++|+++|+.|+++|.+|+|+|+.+.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~ 162 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPG 162 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 4699999999999999999999999999999988653
No 105
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.03 E-value=3.7e-10 Score=102.95 Aligned_cols=37 Identities=38% Similarity=0.630 Sum_probs=32.8
Q ss_pred CCC-CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 1 MEE-DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 1 M~~-~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|++ +|||+||||||||+++|+.|+++|++|+|||+..
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 764 7999999999999999999999999999999854
No 106
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.03 E-value=1e-09 Score=107.18 Aligned_cols=112 Identities=25% Similarity=0.336 Sum_probs=77.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
..+||+||||||+|+++|+.|+++|++|+|+|+... +. .. ... .+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~G----G~--~~--------~~~--------------~~~------ 256 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFG----GQ--VL--------DTV--------------DIE------ 256 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTT----GG--GT--------TCS--------------CBC------
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCC----Cc--cc--------ccc--------------ccc------
Confidence 367999999999999999999999999999986321 10 00 000 000
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEe---CCeEEEEEcCCCEEecCEEEEc
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEES---GLFKLVNLADGAVFKTKVLIGC 157 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~---~~~~~v~~~~g~~~~ad~vV~A 157 (409)
. +. .........+.+.+.+.+ .+++++.+++|..++.+ ++.+.|.+.+|.++.+|.||.|
T Consensus 257 -----~--~~--------~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlA 321 (521)
T 1hyu_A 257 -----N--YI--------SVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIA 321 (521)
T ss_dssp -----C--BT--------TBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEEC
T ss_pred -----c--cC--------CCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEEC
Confidence 0 00 000134455656555443 26899999999999764 2368899999989999999999
Q ss_pred CCCchH
Q 015331 158 DGVNSV 163 (409)
Q Consensus 158 dG~~s~ 163 (409)
+|..+.
T Consensus 322 tG~~~~ 327 (521)
T 1hyu_A 322 TGAKWR 327 (521)
T ss_dssp CCEEEC
T ss_pred CCCCcC
Confidence 998753
No 107
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.02 E-value=1.4e-09 Score=106.39 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=46.0
Q ss_pred HHHHHHHHHhhCCCCeEEeCceEEEEEEe-CCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 107 RSLLMEALERELPSGTIRYSSKVVSVEES-GLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 107 r~~l~~~l~~~~~~~~i~~~~~v~~v~~~-~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
-..+.+.|.+.+++.+|+++++|+.|..+ ++.+.|++.+|++++||.||.|.+...
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~ 257 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSV 257 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHH
Confidence 45566667666666689999999999986 667999999998899999999998654
No 108
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.01 E-value=3.2e-09 Score=96.62 Aligned_cols=111 Identities=20% Similarity=0.232 Sum_probs=73.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEE-EeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLV-LESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v-~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
+++||+||||||+|+++|..|+++|++|+| +|+ +.+... .. ... ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~---~~--------------------~~~---~~------ 49 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQ---IT--------------------SSS---EI------ 49 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGG---GG--------------------GCS---CB------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCce---ee--------------------eec---ee------
Confidence 457999999999999999999999999999 998 332110 00 000 00
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeC--CeEEEEEcCCCEEecCEEEEc
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELP--SGTIRYSSKVVSVEESG--LFKLVNLADGAVFKTKVLIGC 157 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~--~~~~v~~~~g~~~~ad~vV~A 157 (409)
. .++ .....+...++...+.+.+. +++++++ +|..+ .++ +.+.++...+.++.+|.||.|
T Consensus 50 -----~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlA 113 (315)
T 3r9u_A 50 -----E--NYP-------GVAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVC 113 (315)
T ss_dssp -----C--CST-------TCCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEEC
T ss_pred -----c--cCC-------CCCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEe
Confidence 0 000 00012455667676665443 5788888 89899 776 678853332228999999999
Q ss_pred CCCch
Q 015331 158 DGVNS 162 (409)
Q Consensus 158 dG~~s 162 (409)
+|...
T Consensus 114 tG~~~ 118 (315)
T 3r9u_A 114 TGSAP 118 (315)
T ss_dssp CCEEE
T ss_pred eCCCC
Confidence 99754
No 109
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.01 E-value=6.8e-10 Score=108.71 Aligned_cols=35 Identities=31% Similarity=0.512 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+|||||++||++|+.|++ |.+|+|+||.+..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 5899999999999999999999 9999999998754
No 110
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.01 E-value=3.2e-09 Score=103.05 Aligned_cols=54 Identities=13% Similarity=0.128 Sum_probs=45.1
Q ss_pred HHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCC---CEEecCEEEEcCCCc
Q 015331 108 SLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADG---AVFKTKVLIGCDGVN 161 (409)
Q Consensus 108 ~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g---~~~~ad~vV~AdG~~ 161 (409)
..|.+.|.+.++.++|+++++|+.|+.++++++|++.+| ++++||.||.|....
T Consensus 239 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 456667777664478999999999999999999998876 579999999999865
No 111
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.00 E-value=2.6e-10 Score=110.51 Aligned_cols=39 Identities=23% Similarity=0.529 Sum_probs=35.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
|+.++||+|||||++|+++|..|++.|++|+|||+++.+
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 555789999999999999999999999999999997654
No 112
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.00 E-value=4.5e-10 Score=108.77 Aligned_cols=146 Identities=18% Similarity=0.206 Sum_probs=79.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|++++||+||||||+|+++|..|+++|++|+|||+.+.++......+. ..+..++...++++.+.... ...++...
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~-~psk~l~~~~~~~~~~~~~~-~~~gi~~~-- 77 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGC-IPSKALLNNSHLFHQMHTEA-QKRGIDVN-- 77 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSH-HHHHHHHHHHHHHHHHHHTS-GGGTEEEC--
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceecc-HHHHHHHHHHHHHHHHHHHH-HhcCcccC--
Confidence 556789999999999999999999999999999997654211000000 11333333333333332111 11122210
Q ss_pred cCCcccccccccccCCCCCccccccC--HHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCC--CE------Ee
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVK--RSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADG--AV------FK 150 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~--r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g--~~------~~ 150 (409)
.. ..+++.... .+....+. +..+.+.+. . .+++++.++.+.. +++.++|.+.+| .+ +.
T Consensus 78 -~~---~~~~~~~~~---~~~~~~~~~l~~~~~~~~~-~-~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~ 145 (478)
T 1v59_A 78 -GD---IKINVANFQ---KAKDDAVKQLTGGIELLFK-K-NKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILD 145 (478)
T ss_dssp -SC---EEECHHHHH---HHHHHHHHHHHHHHHHHHH-H-TTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEE
T ss_pred -CC---CccCHHHHH---HHHHHHHHHHHHHHHHHHH-h-CCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEE
Confidence 00 011111000 00000000 011222222 2 3788988887652 556788887777 56 99
Q ss_pred cCEEEEcCCCch
Q 015331 151 TKVLIGCDGVNS 162 (409)
Q Consensus 151 ad~vV~AdG~~s 162 (409)
+|.||+|+|..+
T Consensus 146 ~d~lViAtGs~p 157 (478)
T 1v59_A 146 VKNIIVATGSEV 157 (478)
T ss_dssp EEEEEECCCEEE
T ss_pred eCEEEECcCCCC
Confidence 999999999876
No 113
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.00 E-value=1.4e-09 Score=103.63 Aligned_cols=114 Identities=18% Similarity=0.253 Sum_probs=73.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEE
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVA 78 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|++++||+|||||++|+++|..|++.|. +|+|||+.+....... + +...+. .
T Consensus 1 M~~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-----~----------l~~~~~------~----- 54 (431)
T 1q1r_A 1 MNANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLP-----P----------LSKAYL------A----- 54 (431)
T ss_dssp -CCSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSG-----G----------GGTTTT------T-----
T ss_pred CCCCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCC-----C----------CcHHHh------C-----
Confidence 6667899999999999999999999998 7999998764211000 0 000000 0
Q ss_pred eccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 79 SSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
.......+ .+. +.+.+.+ .+++++.+++|+.++..+. +|.+.+|+++.+|.||.|+
T Consensus 55 ---~~~~~~~~--------------~~~---~~~~~~~--~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAt 110 (431)
T 1q1r_A 55 ---GKATAESL--------------YLR---TPDAYAA--QNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLAT 110 (431)
T ss_dssp ---TCSCSGGG--------------BSS---CHHHHHH--TTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECC
T ss_pred ---CCCChHHh--------------ccc---CHHHHHh--CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcC
Confidence 00000000 010 1122222 2689999999999987654 5667788889999999999
Q ss_pred CCchHh
Q 015331 159 GVNSVV 164 (409)
Q Consensus 159 G~~s~v 164 (409)
|..+..
T Consensus 111 G~~p~~ 116 (431)
T 1q1r_A 111 GGRPRP 116 (431)
T ss_dssp CEEECC
T ss_pred CCCccC
Confidence 987643
No 114
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.98 E-value=1.2e-09 Score=105.47 Aligned_cols=144 Identities=19% Similarity=0.228 Sum_probs=79.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 2 EEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 2 ~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
+.++||+||||||+|+++|..|++.|++|+|||+.+.+..........| +..++....+.+.+.... ...++...
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p-~k~l~~~~~~~~~~~~~~-~~~g~~~~--- 78 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIP-SKALLHSSHMYHEAKHSF-ANHGVKVS--- 78 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHH-HHHHHHHHHHHHHHHHTH-HHHTEEES---
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccc-hHHHHHHHHHHHHHHHHH-HhcCcccC---
Confidence 3568999999999999999999999999999999875432210000011 112222111112211100 00011110
Q ss_pred CCcccccccccccCCCCCccccccCH-----HHH----HHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCC--CEEe
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKR-----SLL----MEALERELPSGTIRYSSKVVSVEESGLFKLVNLADG--AVFK 150 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r-----~~l----~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g--~~~~ 150 (409)
. ...++.. .+.+ ..+ .+.+.+. +++++.++.+. .+.+.+.|.+.+| .+++
T Consensus 79 ~----~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~~~--gv~~~~g~~~~---~~~~~~~v~~~~G~~~~i~ 139 (470)
T 1dxl_A 79 N----VEIDLAA----------MMGQKDKAVSNLTRGIEGLFKKN--KVTYVKGYGKF---VSPSEISVDTIEGENTVVK 139 (470)
T ss_dssp C----EEECHHH----------HHHHHHHHHHHHHHHHHHHHHHH--TCEEEESCEEE---EETTEEEECCSSSCCEEEE
T ss_pred C----CccCHHH----------HHHHHHHHHHHHHHHHHHHHHhC--CCEEEEeEEEE---ecCCEEEEEeCCCceEEEE
Confidence 0 0001100 1111 112 2222222 68898888654 3556788887777 6799
Q ss_pred cCEEEEcCCCchHhHhHhC
Q 015331 151 TKVLIGCDGVNSVVAKWLG 169 (409)
Q Consensus 151 ad~vV~AdG~~s~vr~~lg 169 (409)
+|.||+|+|..+.+....|
T Consensus 140 ~d~lIiAtGs~p~~p~~~g 158 (470)
T 1dxl_A 140 GKHIIIATGSDVKSLPGVT 158 (470)
T ss_dssp CSEEEECCCEEECCBTTBC
T ss_pred cCEEEECCCCCCCCCCCCC
Confidence 9999999998775443333
No 115
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.96 E-value=8e-09 Score=99.21 Aligned_cols=51 Identities=10% Similarity=-0.019 Sum_probs=41.4
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCe-EEEEEcCCCEEecCEEEEcCCCc
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLF-KLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~-~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
.+.+.|.+.+ +++|+++++|++|..++++ +.|++ ++.++.||.||.|.+..
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 216 QVSIRMAEAL-GDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHHH-GGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred HHHHHHHHhc-CCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 4445555554 5789999999999998888 88876 67789999999999976
No 116
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.96 E-value=3.1e-09 Score=102.92 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=40.8
Q ss_pred CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchHh
Q 015331 120 SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSVV 164 (409)
Q Consensus 120 ~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~v 164 (409)
+++++.+++|.+++.+++.+.|.+.+|+++.+|.||.|.|..+..
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 789999999999999888889999999899999999999987654
No 117
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.96 E-value=3.5e-09 Score=102.01 Aligned_cols=58 Identities=14% Similarity=-0.028 Sum_probs=41.2
Q ss_pred HHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEE-EEEc-CCCEEecCEEEEcCCCchHhHh
Q 015331 108 SLLMEALEREL--PSGTIRYSSKVVSVEESGLFKL-VNLA-DGAVFKTKVLIGCDGVNSVVAK 166 (409)
Q Consensus 108 ~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~-v~~~-~g~~~~ad~vV~AdG~~s~vr~ 166 (409)
..+.+.|.+.+ .+++++.+++| ++..+++.+. +... ++.++.+|.||.|+|.+|.+..
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~ 180 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYE 180 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSS
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCc
Confidence 45556665543 37899999999 9987777552 3332 2235789999999999997754
No 118
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.95 E-value=8.5e-09 Score=102.91 Aligned_cols=37 Identities=27% Similarity=0.495 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.++||||||||++||++|+.|+++|.+|+|+||.+..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 4689999999999999999999999999999998754
No 119
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.93 E-value=2.9e-09 Score=102.67 Aligned_cols=40 Identities=28% Similarity=0.420 Sum_probs=35.8
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
|++++||+||||||+|+++|..|++.|++|+|||+++.++
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G 40 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG 40 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 7778999999999999999999999999999999877543
No 120
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.92 E-value=6.7e-09 Score=102.88 Aligned_cols=57 Identities=14% Similarity=-0.013 Sum_probs=43.0
Q ss_pred HHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEE-EEE---cCCC--EEecCEEEEcCCCchHh
Q 015331 108 SLLMEALEREL--PSGTIRYSSKVVSVEESGLFKL-VNL---ADGA--VFKTKVLIGCDGVNSVV 164 (409)
Q Consensus 108 ~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~-v~~---~~g~--~~~ad~vV~AdG~~s~v 164 (409)
..+...|.+.+ .++++++++.|+++..+++.+. |.. .+|+ .+.|+.||.|+|.++.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 46777777654 3689999999999987766532 333 4565 68999999999999864
No 121
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.92 E-value=3.1e-09 Score=103.78 Aligned_cols=58 Identities=24% Similarity=0.287 Sum_probs=42.4
Q ss_pred HHHHHHHHhhCC--CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchHhHhHh
Q 015331 108 SLLMEALERELP--SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSVVAKWL 168 (409)
Q Consensus 108 ~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 168 (409)
..+.+.|.+.++ +++++++++|+.|..+++. +++.+|+++.||.||.+.-.. .+.+.+
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~-~l~~~l 281 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVD-FLAEAM 281 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHH-HHHHHT
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHH-HHHHhc
Confidence 456667777665 5689999999999887764 567899999999999765543 333433
No 122
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.91 E-value=4.1e-10 Score=108.57 Aligned_cols=144 Identities=14% Similarity=0.154 Sum_probs=78.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
|+ ++||+||||||+|+++|..|++.|++|+|||+.. .......... ..+..++...++++.+...... .++. .
T Consensus 1 M~-~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~-~psk~ll~~~~~~~~~~~~~~~-~g~~--~- 73 (464)
T 2a8x_A 1 MT-HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGC-IPSKALLRNAELVHIFTKDAKA-FGIS--G- 73 (464)
T ss_dssp CE-EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSH-HHHHHHHHHHHHHHHHHHHTTT-TTEE--E-
T ss_pred CC-cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCc-hhhHHHHHHHHHHHHHHHHHHh-cCCC--C-
Confidence 53 5899999999999999999999999999999873 2110000000 1133334433333333211111 1111 0
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhC--CCCeEEeCceEEEEEEeCCeEEEEEcCC--CEEecCEEEE
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL--PSGTIRYSSKVVSVEESGLFKLVNLADG--AVFKTKVLIG 156 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~--~~~~i~~~~~v~~v~~~~~~~~v~~~~g--~~~~ad~vV~ 156 (409)
. ...++..... .....+ ..+.+.+.+.+ .+++++.++.+. .+++.++|.+.+| .++.+|.||+
T Consensus 74 -~----~~~~~~~~~~---~~~~~~--~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lVi 140 (464)
T 2a8x_A 74 -E----VTFDYGIAYD---RSRKVA--EGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAII 140 (464)
T ss_dssp -C----CEECHHHHHH---HHHHHH--HHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEE
T ss_pred -C----CccCHHHHHH---HHHHHH--HHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEE
Confidence 0 0111110000 000000 12222222211 368888877653 3556788888887 6799999999
Q ss_pred cCCCchHh
Q 015331 157 CDGVNSVV 164 (409)
Q Consensus 157 AdG~~s~v 164 (409)
|+|..+.+
T Consensus 141 AtG~~~~~ 148 (464)
T 2a8x_A 141 ATGSSTRL 148 (464)
T ss_dssp CCCEEECC
T ss_pred CCCCCCCC
Confidence 99998754
No 123
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.91 E-value=2.5e-08 Score=94.93 Aligned_cols=53 Identities=11% Similarity=0.094 Sum_probs=41.6
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
.+.+.|.+.+ +.+++++++|++|+.++++++|++.+|+ ++||.||.|.+....
T Consensus 207 ~l~~~l~~~l-~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 207 AMFEHLNATL-EHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHS-SSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHhh-cceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 3444555555 3478899999999988888989888875 899999999998643
No 124
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.91 E-value=2.4e-08 Score=98.71 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+|||||++|+++|+.|+++|.+|+|+||.+..
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 579999999999999999999999999999998754
No 125
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.86 E-value=1.4e-09 Score=104.00 Aligned_cols=111 Identities=16% Similarity=0.257 Sum_probs=72.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHH---cCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEE
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHR---LGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVV 77 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~---~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 77 (409)
|....||+|||||++|+++|..|++ .|++|+|||+++.... .+....... |.
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~~~~~~~~~--g~---------------- 55 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------VPSNPWVGV--GW---------------- 55 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------GGGHHHHHH--TS----------------
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------cCCcccccc--Cc----------------
Confidence 6666799999999999999999999 8999999998874211 110000000 00
Q ss_pred EeccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEc
Q 015331 78 ASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGC 157 (409)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~A 157 (409)
.....+. . .+.+.+.+ .+++++ ..+|+.++.++. +|++.++.++.+|.||.|
T Consensus 56 ------~~~~~~~--------------~---~l~~~~~~--~gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviA 107 (437)
T 3sx6_A 56 ------KERDDIA--------------F---PIRHYVER--KGIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIA 107 (437)
T ss_dssp ------SCHHHHE--------------E---ECHHHHHT--TTCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEEC
T ss_pred ------cCHHHHH--------------H---HHHHHHHH--CCCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEEC
Confidence 0000000 0 01222222 267776 468988886655 677788888999999999
Q ss_pred CCCchHh
Q 015331 158 DGVNSVV 164 (409)
Q Consensus 158 dG~~s~v 164 (409)
+|..+..
T Consensus 108 tG~~~~~ 114 (437)
T 3sx6_A 108 TGPKLAF 114 (437)
T ss_dssp CCCEECG
T ss_pred CCCCcCc
Confidence 9987654
No 126
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.85 E-value=6.9e-09 Score=100.19 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=65.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEE
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVA 78 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|+ ++||+|||||++|+++|..|+++ |.+|+|||+++.+....++ +...+ .....
T Consensus 1 M~-~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~g---------------l~~~~--------~g~~~ 56 (472)
T 3iwa_A 1 MS-LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCG---------------IPYYV--------SGEVS 56 (472)
T ss_dssp ----CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC------------------------------------------
T ss_pred CC-CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccc---------------cchhh--------cCCCC
Confidence 54 57999999999999999999998 9999999998864321111 10000 00000
Q ss_pred eccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE-cCCC--EEecCEEE
Q 015331 79 SSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL-ADGA--VFKTKVLI 155 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~-~~g~--~~~ad~vV 155 (409)
...... ++. .......+.+.+. .+++++++++|+.++..+..+.+.. .+|. ++.+|.||
T Consensus 57 ---~~~~~~--~~~------------~~~~~~~~~~~~~-~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lv 118 (472)
T 3iwa_A 57 ---NIESLQ--ATP------------YNVVRDPEFFRIN-KDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLV 118 (472)
T ss_dssp ------------------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEE
T ss_pred ---chHHhc--ccc------------chhccCHHHHhhh-cCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEE
Confidence 000000 000 0000011112211 2678899999999998888777765 3354 78999999
Q ss_pred EcCCCch
Q 015331 156 GCDGVNS 162 (409)
Q Consensus 156 ~AdG~~s 162 (409)
.|+|...
T Consensus 119 iAtG~~p 125 (472)
T 3iwa_A 119 LALGSKA 125 (472)
T ss_dssp ECCCEEE
T ss_pred EeCCCCc
Confidence 9999753
No 127
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.83 E-value=1.7e-08 Score=96.16 Aligned_cols=39 Identities=28% Similarity=0.403 Sum_probs=35.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
|.+.+||+|||+|++|+++|+.|+++|.+|+|+|+++..
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYY 55 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 556789999999999999999999999999999999754
No 128
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.83 E-value=8.7e-09 Score=98.93 Aligned_cols=110 Identities=15% Similarity=0.243 Sum_probs=70.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+||+|||||++|+++|..|+++ |.+|+|||+.+.+....++.... +. .... .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~------~~-----------------~~~~---~ 56 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAY------FN-----------------HTIN---E 56 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhh------hc-----------------CCCC---C
Confidence 6999999999999999999998 89999999988543221111000 00 0000 0
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE-cCCCEEecCEEEEcCCCc
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL-ADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~-~~g~~~~ad~vV~AdG~~ 161 (409)
...+. ..... .+.+ .+++++++++|+.++..++.+.+.. .++.++.+|.||.|+|..
T Consensus 57 ---~~~~~-------------~~~~~----~~~~--~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~ 114 (452)
T 3oc4_A 57 ---LHEAR-------------YITEE----ELRR--QKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGAS 114 (452)
T ss_dssp -------C-------------CCCHH----HHHH--TTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCC
T ss_pred ---HHHhh-------------cCCHH----HHHH--CCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcc
Confidence 00000 00111 2222 2678889999999998888777752 244579999999999985
Q ss_pred h
Q 015331 162 S 162 (409)
Q Consensus 162 s 162 (409)
.
T Consensus 115 p 115 (452)
T 3oc4_A 115 Q 115 (452)
T ss_dssp B
T ss_pred c
Confidence 4
No 129
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.83 E-value=1.3e-08 Score=97.72 Aligned_cols=111 Identities=19% Similarity=0.278 Sum_probs=67.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEE
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVA 78 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|+ ++||+|||||++|+++|..|++. |.+|+|||+.+......++. .. +.
T Consensus 1 M~-~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~---------------p~-------------~~ 51 (449)
T 3kd9_A 1 MS-LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGI---------------PY-------------VV 51 (449)
T ss_dssp -C-CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--------------------------------------
T ss_pred CC-cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCC---------------cc-------------cc
Confidence 54 57999999999999999999998 88999999987542211110 00 00
Q ss_pred eccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCC-CEEecCEEEEc
Q 015331 79 SSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADG-AVFKTKVLIGC 157 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g-~~~~ad~vV~A 157 (409)
.+.. ... . .+.+ ..+.+.++ .+++++++++|+.++.. .+.|.+.++ .++.+|.||.|
T Consensus 52 ---~~~~----~~~--------~--~~~~--~~~~~~~~-~gi~v~~~~~v~~i~~~--~~~v~~~~g~~~~~~d~lviA 109 (449)
T 3kd9_A 52 ---EGLS----TPD--------K--LMYY--PPEVFIKK-RGIDLHLNAEVIEVDTG--YVRVRENGGEKSYEWDYLVFA 109 (449)
T ss_dssp ---------------------------------CTHHHH-TTCEEETTCEEEEECSS--EEEEECSSSEEEEECSEEEEC
T ss_pred ---CCCC----CHH--------H--hhhc--CHHHHHHh-cCcEEEecCEEEEEecC--CCEEEECCceEEEEcCEEEEC
Confidence 0000 000 0 0000 00112122 26899999999988543 466777777 37999999999
Q ss_pred CCCch
Q 015331 158 DGVNS 162 (409)
Q Consensus 158 dG~~s 162 (409)
+|...
T Consensus 110 tG~~p 114 (449)
T 3kd9_A 110 NGASP 114 (449)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99654
No 130
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.82 E-value=1.4e-08 Score=96.29 Aligned_cols=110 Identities=25% Similarity=0.389 Sum_probs=71.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCc--eEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIR--SLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~--V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
+++||+|||||++|+++|..|+++|++ |+|||+.+.+..... + +...+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-----~----------l~~~~--------------- 57 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP-----P----------LSKEY--------------- 57 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG-----G----------GGTTT---------------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc-----c----------CCHHH---------------
Confidence 357999999999999999999999987 999999875321100 0 00000
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCC
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGV 160 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~ 160 (409)
..+. ... .. ..... .+.+.+ .+++++.+++|..++.... .|.+.++.++.+|.||.|+|.
T Consensus 58 ~~~~----~~~--------~~-~~~~~---~~~~~~--~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 58 LARE----KTF--------ER-ICIRP---AQFWED--KAVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp TTTS----SCS--------GG-GBSSC---HHHHHH--TTEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCE
T ss_pred HcCC----CCH--------HH-hccCC---HHHHHH--CCcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCC
Confidence 0000 000 00 01111 122222 2688999999999876554 577788889999999999996
Q ss_pred ch
Q 015331 161 NS 162 (409)
Q Consensus 161 ~s 162 (409)
..
T Consensus 118 ~~ 119 (415)
T 3lxd_A 118 DP 119 (415)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 131
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.82 E-value=5.4e-09 Score=101.48 Aligned_cols=37 Identities=22% Similarity=0.515 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
+++||+||||||+|+++|..|+++|++|+|||+.+.+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4689999999999999999999999999999987654
No 132
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.80 E-value=6.6e-08 Score=93.32 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=45.6
Q ss_pred HHHHHHHhhCC----------CCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 109 LLMEALERELP----------SGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 109 ~l~~~l~~~~~----------~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
.+.+.|.+.+. +++|+++++|++|+.++++++|++.+|++++||.||.|.+...
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHH
Confidence 56666776653 4589999999999999888999999998999999999999654
No 133
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.79 E-value=8.2e-09 Score=99.57 Aligned_cols=36 Identities=28% Similarity=0.580 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+||||||+|+++|..|++.|++|+|||+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 589999999999999999999999999999998654
No 134
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.79 E-value=1.7e-08 Score=97.55 Aligned_cols=112 Identities=17% Similarity=0.211 Sum_probs=73.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+||+|||||++|+++|..|++. |.+|+|||+.+......++ +..+ + .
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-------~~~~--~----------------------~ 85 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-------LPYV--I----------------------S 85 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-------HHHH--H----------------------T
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-------cchh--h----------------------c
Confidence 6999999999999999999996 8999999998754322111 1000 0 0
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE-cCCC--EEecCEEEEcCC
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL-ADGA--VFKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~-~~g~--~~~ad~vV~AdG 159 (409)
+.. .... . .+.+ ..+.+.+. .+++++++++|..++.+++.+.+.. .+|+ ++.+|.||.|+|
T Consensus 86 ~~~---~~~~--------~--l~~~--~~~~~~~~-~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (480)
T 3cgb_A 86 GAI---ASTE--------K--LIAR--NVKTFRDK-YGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATG 149 (480)
T ss_dssp TSS---SCGG--------G--GBSS--CHHHHHHT-TCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCc---CCHH--------H--hhhc--CHHHHHhh-cCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCC
Confidence 000 0000 0 0000 01223232 2688999999999988777777765 4566 799999999999
Q ss_pred CchH
Q 015331 160 VNSV 163 (409)
Q Consensus 160 ~~s~ 163 (409)
....
T Consensus 150 ~~p~ 153 (480)
T 3cgb_A 150 VRPV 153 (480)
T ss_dssp EEEC
T ss_pred Cccc
Confidence 7653
No 135
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.78 E-value=1.7e-08 Score=97.90 Aligned_cols=112 Identities=19% Similarity=0.201 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC---CceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEec
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLG---IRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASS 80 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g---~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 80 (409)
++||+|||||++|+++|..|++.| .+|+|||+++.....+++ ... .++ . ..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-------~~~--~~~-------~--~~-------- 88 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-------MAL--WIG-------E--QI-------- 88 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-------HHH--HHT-------T--SS--------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-------cch--hhc-------C--cc--------
Confidence 479999999999999999999988 999999998754322221 100 000 0 00
Q ss_pred cCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc-CCCEEecCEEEEcCC
Q 015331 81 VSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA-DGAVFKTKVLIGCDG 159 (409)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~-~g~~~~ad~vV~AdG 159 (409)
.. ...+. .-.+ +.+.+ .+++++.+++|..++.+++.+.+... ++.++.+|.||.|+|
T Consensus 89 ~~---~~~~~-------------~~~~----~~~~~--~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG 146 (490)
T 2bc0_A 89 AG---PEGLF-------------YSDK----EELES--LGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATG 146 (490)
T ss_dssp SC---SGGGB-------------SCCH----HHHHH--TTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCC
T ss_pred CC---HHHhh-------------hcCH----HHHHh--CCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCC
Confidence 00 00000 0011 22222 26889999999999877777766521 234799999999999
Q ss_pred CchH
Q 015331 160 VNSV 163 (409)
Q Consensus 160 ~~s~ 163 (409)
..+.
T Consensus 147 ~~p~ 150 (490)
T 2bc0_A 147 SQPI 150 (490)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 7653
No 136
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.78 E-value=8.4e-09 Score=99.67 Aligned_cols=37 Identities=27% Similarity=0.654 Sum_probs=34.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.++||+||||||+|+++|..|++.|++|+|||+.+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 3579999999999999999999999999999998754
No 137
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.77 E-value=8.1e-09 Score=99.23 Aligned_cols=34 Identities=24% Similarity=0.510 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
.++||+||||||+|+++|..|++.|++|+|||+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3589999999999999999999999999999987
No 138
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.77 E-value=2.7e-08 Score=98.84 Aligned_cols=112 Identities=19% Similarity=0.213 Sum_probs=73.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++||+|||||++|+++|..|++. |.+|+|||+.+.+....+ ++.. .+
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~-------~lp~--------~~---------------- 84 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANC-------GLPY--------YI---------------- 84 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-------GHHH--------HH----------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCC-------CCch--------hh----------------
Confidence 46999999999999999999998 899999999886432111 1100 00
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE-cCCC--EEecCEEEEcC
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL-ADGA--VFKTKVLIGCD 158 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~-~~g~--~~~ad~vV~Ad 158 (409)
.+... . ....... .+ +.+.++. ++.++++++|+.++..++.+.+.. .++. ++.+|.||.|+
T Consensus 85 ~g~~~-----~-------~~~~~~~--~~-~~~~~~~-gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAt 148 (588)
T 3ics_A 85 GGVIT-----E-------RQKLLVQ--TV-ERMSKRF-NLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSP 148 (588)
T ss_dssp TTSSC-----C-------GGGGBSS--CH-HHHHHHT-TCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred cCcCC-----C-------hHHhhcc--CH-HHHHHhc-CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECC
Confidence 00000 0 0000000 11 2222232 678999999999998888777765 3555 68999999999
Q ss_pred CCch
Q 015331 159 GVNS 162 (409)
Q Consensus 159 G~~s 162 (409)
|...
T Consensus 149 G~~p 152 (588)
T 3ics_A 149 GAKP 152 (588)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9754
No 139
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.76 E-value=2.9e-08 Score=93.02 Aligned_cols=109 Identities=23% Similarity=0.224 Sum_probs=72.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
++.+|+|||||+||+++|..|++.+.+|+|||+.+....... . |.+ .+ . +. ..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~-------~---l~~-----~l-~------g~-----~~ 60 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRP-------R---LNE-----II-A------KN-----KS 60 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGG-------G---HHH-----HH-H------SC-----CC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccC-------h---hhH-----HH-c------CC-----CC
Confidence 457999999999999999999888999999999876331100 0 000 00 0 00 00
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
...+ ... ..+.+.+. +++++++++|+.++.++. +|++.+|+++.+|.||.|+|...
T Consensus 61 ---~~~l--------------~~~---~~~~~~~~--~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 61 ---IDDI--------------LIK---KNDWYEKN--NIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSIA 116 (385)
T ss_dssp ---GGGT--------------BSS---CHHHHHHT--TCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred ---HHHc--------------cCC---CHHHHHHC--CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCCc
Confidence 0000 011 11222222 789999999999987665 57778898999999999999743
No 140
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.75 E-value=2.7e-08 Score=95.89 Aligned_cols=37 Identities=22% Similarity=0.410 Sum_probs=35.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|+.++||+|||||++|+++|+.|++.|++|+|||++.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 7788999999999999999999999999999999873
No 141
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.75 E-value=1.6e-08 Score=97.22 Aligned_cols=36 Identities=28% Similarity=0.548 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+||||||+|+++|..|++.|++|+|||+++.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 379999999999999999999999999999998654
No 142
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.74 E-value=9.7e-08 Score=89.56 Aligned_cols=108 Identities=18% Similarity=0.243 Sum_probs=81.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------~---------------------- 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG------------------L---------------------- 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------T----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc------------------c----------------------
Confidence 468999999999999999999999999999987643220 0
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ +.. + ...+.+.+.+ .+++++++++|.+++.+++.+.|.+.+|+++.+|.||.|+|..+.
T Consensus 185 -------~-------~~~---~-~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 185 -------L-------HPA---A-AKAVQAGLEG--LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp -------S-------CHH---H-HHHHHHHHHT--TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred -------c-------CHH---H-HHHHHHHHHH--cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 0 000 0 1233344433 278999999999999888888899999989999999999998775
Q ss_pred h--HhHhCCC
Q 015331 164 V--AKWLGFK 171 (409)
Q Consensus 164 v--r~~lg~~ 171 (409)
. .+.+|+.
T Consensus 245 ~~l~~~~g~~ 254 (384)
T 2v3a_A 245 TELAFAAGLA 254 (384)
T ss_dssp CHHHHHTTCC
T ss_pred HHHHHHCCCC
Confidence 3 4455554
No 143
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.74 E-value=4.6e-08 Score=92.60 Aligned_cols=107 Identities=16% Similarity=0.286 Sum_probs=70.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCc--eEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIR--SLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~--V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.+|+|||||++|+++|..|+++|++ |+|||+.+....... + +...+..... .
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~-----~----------l~~~~~~g~~-----------~ 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP-----S----------LSKAVLDGSL-----------E 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG-----G----------GGTHHHHTSS-----------S
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc-----c----------ccHHHhCCCC-----------C
Confidence 4999999999999999999999987 999999875321100 0 0010100000 0
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
. ..+ . .. .+.+.+. +++++.+++|+.++.... +|.+.+++++.+|.||.|+|...
T Consensus 57 ~---~~~-~--------------~~---~~~~~~~--~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 57 R---PPI-L--------------AE---ADWYGEA--RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSRA 111 (410)
T ss_dssp S---CCB-S--------------SC---TTHHHHT--TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred H---HHh-c--------------CC---HHHHHHC--CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCcc
Confidence 0 000 0 00 0112222 689999999999986654 67778888999999999999763
No 144
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.73 E-value=3.4e-08 Score=98.74 Aligned_cols=36 Identities=22% Similarity=0.486 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHH---H-cCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALH---R-LGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~---~-~g~~V~v~E~~~~~ 39 (409)
++||||||||+|||++|+.|+ + +|.+|+|+||.+..
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 479999999999999999999 6 89999999998753
No 145
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.72 E-value=6.8e-08 Score=92.54 Aligned_cols=110 Identities=13% Similarity=0.136 Sum_probs=71.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+||+|||||++|+++|..|++. |.+|+|||+.+.....++ .... .+ .+. . .+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~--~~--------~~~-~--------~~ 54 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA-------GMQL--YL--------EGK-V--------KD 54 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG-------GHHH--HH--------TTS-S--------CC
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc-------cchh--hh--------cCc-c--------CC
Confidence 4899999999999999999998 999999999875432211 1100 00 000 0 00
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE-cCCC--EEecCEEEEcCC
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL-ADGA--VFKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~-~~g~--~~~ad~vV~AdG 159 (409)
...+ ..- +.+.+.+ . +++++.+++|..++.+++.+.+.. .+|+ ++.+|.||.|+|
T Consensus 55 ---~~~~-------------~~~----~~~~~~~-~-gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG 112 (447)
T 1nhp_A 55 ---VNSV-------------RYM----TGEKMES-R-GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPG 112 (447)
T ss_dssp ---GGGS-------------BSC----CHHHHHH-T-TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ---HHHh-------------hcC----CHHHHHH-C-CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCC
Confidence 0000 000 1122332 2 688999999999987777777665 3455 489999999999
Q ss_pred Cch
Q 015331 160 VNS 162 (409)
Q Consensus 160 ~~s 162 (409)
...
T Consensus 113 ~~p 115 (447)
T 1nhp_A 113 AVP 115 (447)
T ss_dssp EEE
T ss_pred CCc
Confidence 764
No 146
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.72 E-value=1.2e-08 Score=95.76 Aligned_cols=37 Identities=27% Similarity=0.540 Sum_probs=31.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcC--CceEEEeCCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLG--IRSLVLESSE 37 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g--~~V~v~E~~~ 37 (409)
|+.++||+|||||++|+++|..|++.| .+|+|+|+++
T Consensus 1 M~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 1 MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 777899999999999999999999998 5689999875
No 147
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.71 E-value=4.1e-08 Score=92.85 Aligned_cols=106 Identities=18% Similarity=0.204 Sum_probs=70.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
++||+|||||++|+++|..|++.|. +|+|||+.+....... +....++.. ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-----~~~~~~~~~----------~~----------- 60 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP-----PLSKDFMAH----------GD----------- 60 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG-----GGGTHHHHH----------CC-----------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC-----CCCHHHhCC----------Cc-----------
Confidence 5899999999999999999999998 4999998874321100 000001100 00
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCc
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
...+ .+. ..+. .+++++.+++|+.++... .+|++.+++++.+|.||.|+|..
T Consensus 61 ----~~~~--------------~~~-------~~~~-~~v~~~~~~~v~~i~~~~--~~v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 61 ----AEKI--------------RLD-------CKRA-PEVEWLLGVTAQSFDPQA--HTVALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp ----GGGS--------------BCC-------CTTS-CSCEEEETCCEEEEETTT--TEEEETTSCEEECSEEEECCCEE
T ss_pred ----hhhh--------------hHH-------HHHH-CCCEEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCCCC
Confidence 0000 011 0111 267899999999987654 35677788889999999999986
Q ss_pred hH
Q 015331 162 SV 163 (409)
Q Consensus 162 s~ 163 (409)
+.
T Consensus 113 ~~ 114 (408)
T 2gqw_A 113 PR 114 (408)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 148
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.71 E-value=4.5e-08 Score=93.91 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=71.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
+||+|||||++|+++|..|++. |.+|+|||+.+.....++ .+.. .++ + ...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~--~~~--------g-~~~--------- 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-------GIAL--YLG--------K-EIK--------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-------GHHH--HHT--------T-CBG---------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-------cchh--hhc--------C-Ccc---------
Confidence 4899999999999999999998 999999999875432221 1100 000 0 000
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc-C--CCEEecCEEEEcCC
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA-D--GAVFKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~-~--g~~~~ad~vV~AdG 159 (409)
...... . ... +.+.+.+ .+++++.+++|..++.+++.+.+... + +.++.+|.||.|+|
T Consensus 54 -----~~~~~~--------~-~~~---~~~~~~~--~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 114 (452)
T 2cdu_A 54 -----NNDPRG--------L-FYS---SPEELSN--LGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTG 114 (452)
T ss_dssp -----GGCGGG--------G-BSC---CHHHHHH--TTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred -----cCCHHH--------h-hhc---CHHHHHH--cCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccC
Confidence 000000 0 000 1122222 26889999999999877777766542 2 35799999999999
Q ss_pred CchH
Q 015331 160 VNSV 163 (409)
Q Consensus 160 ~~s~ 163 (409)
..+.
T Consensus 115 s~p~ 118 (452)
T 2cdu_A 115 SKPT 118 (452)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 7653
No 149
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.71 E-value=1.6e-08 Score=95.77 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHR---LGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~---~g~~V~v~E~~~~ 38 (409)
.+|+|||||++|+++|..|++ .|.+|+|||+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 489999999999999999999 8999999998873
No 150
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.69 E-value=2.1e-07 Score=89.37 Aligned_cols=99 Identities=24% Similarity=0.364 Sum_probs=77.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... ...+
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------~~~~-------------------- 209 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT------------------MDLE-------------------- 209 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCHH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc------------------cCHH--------------------
Confidence 58999999999999999999999999999988753210 0000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchHh
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSVV 164 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~v 164 (409)
+ ...+.+.|.+. +++++.+++|++++.+++.+.+++.+++++.+|.||.|+|..+..
T Consensus 210 --------------------~-~~~l~~~l~~~--Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 210 --------------------V-SRAAERVFKKQ--GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp --------------------H-HHHHHHHHHHH--TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred --------------------H-HHHHHHHHHHC--CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 0 11233444443 789999999999998888888888888899999999999998754
No 151
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.68 E-value=1.7e-07 Score=88.45 Aligned_cols=107 Identities=18% Similarity=0.278 Sum_probs=68.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.+|+|||||++|+++|..|+++|+ +|+|||+.+....... + +...+. ..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-----~----------l~~~~l--------------~~ 52 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP-----P----------LSKAYL--------------KS 52 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG-----G----------GGTGGG--------------GS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc-----c----------CCHHHH--------------CC
Confidence 589999999999999999999998 8999999874321100 0 000000 00
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
... .... ... ..+.+.+. +++++. ++|+.++.... .|.+.++.++.+|.||.|+|...
T Consensus 53 ~~~-------------~~~~-~~~---~~~~~~~~--~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 53 GGD-------------PNSL-MFR---PEKFFQDQ--AIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGARN 110 (404)
T ss_dssp CCC-------------TTSS-BSS---CHHHHHHT--TEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCEEE
T ss_pred CCC-------------HHHc-cCC---CHHHHHhC--CCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCCCc
Confidence 000 0000 011 11222222 678888 89999886654 57778888999999999999743
No 152
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.68 E-value=2e-08 Score=97.15 Aligned_cols=37 Identities=22% Similarity=0.546 Sum_probs=34.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
+++||+||||||+|+++|+.|++.|++|+|||+++.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 4799999999999999999999999999999998743
No 153
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.66 E-value=4.9e-08 Score=97.39 Aligned_cols=36 Identities=17% Similarity=0.362 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc------CCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL------GIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~------g~~V~v~E~~~~~ 39 (409)
++||||||||+|||++|+.|+++ |.+|+|+||....
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 48999999999999999999998 9999999998643
No 154
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.66 E-value=5.9e-08 Score=92.43 Aligned_cols=107 Identities=18% Similarity=0.246 Sum_probs=66.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcC--CceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEE
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLG--IRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVA 78 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g--~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|+ .+|||||||+||+++|..|++.+ .+|+|||+++... +.|....... |. ...
T Consensus 1 M~--K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~--g~--------~~~------ 55 (430)
T 3hyw_A 1 MA--KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAM--GW--------RKF------ 55 (430)
T ss_dssp -C--CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHH--TC--------SCG------
T ss_pred CC--CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhc--CC--------CCH------
Confidence 65 37999999999999999999865 7899999876421 1221111100 00 000
Q ss_pred eccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 79 SSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
..+..+ +.+.+.+. +++++.+ +|+.|+.++. +|++++|+++.+|+||.|+
T Consensus 56 --------~~i~~~-----------------~~~~~~~~--gv~~i~~-~v~~Id~~~~--~V~~~~g~~i~YD~LViAt 105 (430)
T 3hyw_A 56 --------EDISVP-----------------LAPLLPKF--NIEFINE-KAESIDPDAN--TVTTQSGKKIEYDYLVIAT 105 (430)
T ss_dssp --------GGSEEE-----------------STTTGGGG--TEEEECS-CEEEEETTTT--EEEETTCCEEECSEEEECC
T ss_pred --------HHhhhc-----------------HHHHHHHC--CcEEEEe-EEEEEECCCC--EEEECCCCEEECCEEEEeC
Confidence 001010 00011111 5666655 7888887665 5778899999999999999
Q ss_pred CCch
Q 015331 159 GVNS 162 (409)
Q Consensus 159 G~~s 162 (409)
|...
T Consensus 106 G~~~ 109 (430)
T 3hyw_A 106 GPKL 109 (430)
T ss_dssp CCEE
T ss_pred CCCc
Confidence 9753
No 155
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.65 E-value=5.7e-09 Score=101.34 Aligned_cols=59 Identities=17% Similarity=0.101 Sum_probs=46.0
Q ss_pred ccCHHHHHHHHHhhCC--CCeEEeCceEEEEEEeC--------CeEEEEEcCCC-----EEecCEEEEcCCCch
Q 015331 104 SVKRSLLMEALERELP--SGTIRYSSKVVSVEESG--------LFKLVNLADGA-----VFKTKVLIGCDGVNS 162 (409)
Q Consensus 104 ~i~r~~l~~~l~~~~~--~~~i~~~~~v~~v~~~~--------~~~~v~~~~g~-----~~~ad~vV~AdG~~s 162 (409)
...|.++.++|...+. +..++++++|++++..+ +.|+|++.++. ++.|+.||.|+|...
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 5778899998876543 35799999999998754 25888887643 689999999999643
No 156
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.65 E-value=6.5e-08 Score=94.37 Aligned_cols=35 Identities=29% Similarity=0.524 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 46899999999999999999999999999999865
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.65 E-value=1.9e-07 Score=89.76 Aligned_cols=99 Identities=22% Similarity=0.272 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +.++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~-------------------- 211 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------GDPE-------------------- 211 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH--------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------cCHH--------------------
Confidence 58999999999999999999999999999988753221 0000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc-C--CC--EEecCEEEEcCC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA-D--GA--VFKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~-~--g~--~~~ad~vV~AdG 159 (409)
+ ...+.+.|.+. +++++++++|++++.+++.+.|++. + |+ ++.+|.||.|+|
T Consensus 212 --------------------~-~~~l~~~l~~~--gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G 268 (464)
T 2eq6_A 212 --------------------T-AALLRRALEKE--GIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVG 268 (464)
T ss_dssp --------------------H-HHHHHHHHHHT--TCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSC
T ss_pred --------------------H-HHHHHHHHHhc--CCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCC
Confidence 0 12234444443 7899999999999988887888876 6 76 799999999999
Q ss_pred CchHh
Q 015331 160 VNSVV 164 (409)
Q Consensus 160 ~~s~v 164 (409)
..+..
T Consensus 269 ~~p~~ 273 (464)
T 2eq6_A 269 RKPRT 273 (464)
T ss_dssp EEESC
T ss_pred cccCC
Confidence 87754
No 158
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.64 E-value=3.2e-08 Score=95.91 Aligned_cols=135 Identities=15% Similarity=0.135 Sum_probs=74.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEE
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVA 78 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 78 (409)
|+.++||+|||||+||+++|..|+++ |.+|+|||+.+......+ +-+..++. +....... ...+.
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~-----~lsk~l~~--~~~~~~~~------~~~~~ 74 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP-----PLSKELWF--SDDPNVTK------TLRFK 74 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG-----GGGTGGGC--C--CTHHH------HCEEE
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC-----CCCHHhhc--CCccchhh------ccccc
Confidence 44568999999999999999999887 889999999875421111 00000000 00000000 01111
Q ss_pred eccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcC
Q 015331 79 SSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCD 158 (409)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~Ad 158 (409)
.+.... ..+.+... .+......+.+ ..-.+++++.+++|..++..+. +|.+.+|+++.+|.||.|+
T Consensus 75 ~~~~~~--~~~~~~~~-------~~~~~~~~l~~---~~~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviAT 140 (493)
T 1m6i_A 75 QWNGKE--RSIYFQPP-------SFYVSAQDLPH---IENGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIAT 140 (493)
T ss_dssp CTTSCE--EESBSSCG-------GGSBCTTTTTT---STTCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECC
T ss_pred cccccc--ccccccch-------Hhhcchhhhhh---hhcCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECC
Confidence 111000 00111100 00111111110 0112578999999999986654 5777888899999999999
Q ss_pred CCch
Q 015331 159 GVNS 162 (409)
Q Consensus 159 G~~s 162 (409)
|...
T Consensus 141 Gs~p 144 (493)
T 1m6i_A 141 GGTP 144 (493)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9764
No 159
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.63 E-value=1.1e-07 Score=92.87 Aligned_cols=39 Identities=28% Similarity=0.393 Sum_probs=35.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
|..++||+|||||++|+++|+.|++.|.+|+|||+++.+
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 78 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFL 78 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 345689999999999999999999999999999998743
No 160
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.63 E-value=1.3e-08 Score=97.03 Aligned_cols=105 Identities=16% Similarity=0.222 Sum_probs=67.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH--cCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHR--LGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~--~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.||+|||||++|+++|+.|++ .|++|+|||+++.... .+....... +. ...
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~-------~~~~~~~~~--g~--------~~~---------- 55 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF-------TPAFPHLAM--GW--------RKF---------- 55 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC-------GGGHHHHHH--TC--------SCG----------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc-------CCCcchhcc--Cc--------cCH----------
Confidence 699999999999999999999 7899999999875321 111000000 00 000
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
..+... +.+.+.+ .+++++. .+|+.++.+.. .|.+.+++++.+|.||.|+|...
T Consensus 56 ----~~~~~~-----------------~~~~~~~--~gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 56 ----EDISVP-----------------LAPLLPK--FNIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp ----GGSEEE-----------------STTTGGG--GTEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred ----HHHHHH-----------------HHHHHHh--cCCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCccc
Confidence 000000 0001111 1567765 48888876654 57778888899999999999864
No 161
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.62 E-value=7e-08 Score=95.38 Aligned_cols=111 Identities=17% Similarity=0.257 Sum_probs=71.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
++|+||||||||+++|..|++. |.+|+|||+.+.+....+ .+.. .+ .
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~-------~l~~--~~----------------------~ 50 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC-------GLPY--HI----------------------S 50 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-------GHHH--HH----------------------T
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc-------CchH--Hh----------------------c
Confidence 4899999999999999999998 889999999876432111 1100 00 0
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE-cCCC--EEecCEEEEcCC
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL-ADGA--VFKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~-~~g~--~~~ad~vV~AdG 159 (409)
+.... ........ .+.+.++. +++++++++|+.++..+..+.+.. .++. ++.+|.||.|+|
T Consensus 51 ~~~~~------------~~~~~~~~---~~~~~~~~-~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG 114 (565)
T 3ntd_A 51 GEIAQ------------RSALVLQT---PESFKARF-NVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPG 114 (565)
T ss_dssp SSSCC------------GGGGBCCC---HHHHHHHH-CCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCcCC------------hHHhhccC---HHHHHHhc-CcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCC
Confidence 00000 00001111 12222221 678999999999998888777765 2343 789999999999
Q ss_pred Cch
Q 015331 160 VNS 162 (409)
Q Consensus 160 ~~s 162 (409)
...
T Consensus 115 ~~p 117 (565)
T 3ntd_A 115 AAP 117 (565)
T ss_dssp EEE
T ss_pred CCC
Confidence 854
No 162
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.61 E-value=8.7e-08 Score=89.21 Aligned_cols=105 Identities=15% Similarity=0.172 Sum_probs=67.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.||+||||||||+++|..|++.| +|+|||+.+..... ...+ .. .. .+ .
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~-------~~~l---~~------~~------~g---------~ 56 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYS-------KPML---SH------YI------AG---------F 56 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCC-------STTH---HH------HH------TT---------S
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccc-------cchh---HH------HH------hC---------C
Confidence 59999999999999999999999 99999998753210 0000 00 00 00 0
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
...... ... ..+.+.+. +++++.+++|+.++.+. .+|+ .++.++.+|.||.|+|...
T Consensus 57 ----~~~~~~---------~~~---~~~~~~~~--~v~~~~g~~v~~id~~~--~~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 57 ----IPRNRL---------FPY---SLDWYRKR--GIEIRLAEEAKLIDRGR--KVVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp ----SCGGGG---------CSS---CHHHHHHH--TEEEECSCCEEEEETTT--TEEE-ESSCEEECSEEEECCCEEE
T ss_pred ----CCHHHh---------ccC---CHHHHHhC--CcEEEECCEEEEEECCC--CEEE-ECCcEEECCEEEECCCCCC
Confidence 000000 000 11222222 68899999999887654 3455 6778899999999999754
No 163
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.60 E-value=5.9e-08 Score=94.31 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc---CCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL---GIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~---g~~V~v~E~~~ 37 (409)
++||+|||||++|+++|+.|++. |++|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 99999999886
No 164
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.60 E-value=3.4e-08 Score=95.46 Aligned_cols=35 Identities=20% Similarity=0.499 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++||+||||||+|+++|+.|++.|.+|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999974
No 165
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.58 E-value=6.1e-07 Score=86.22 Aligned_cols=99 Identities=18% Similarity=0.208 Sum_probs=77.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +..++
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~~------------------- 209 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------FDPLL------------------- 209 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHHH-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------cCHHH-------------------
Confidence 58999999999999999999999999999987642110 00000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCC-EEecCEEEEcCCCchH
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGA-VFKTKVLIGCDGVNSV 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~-~~~ad~vV~AdG~~s~ 163 (409)
...+.+.|.+. +++++.+++|.+++.+++++.|++.+|+ ++.+|.||.|+|..+.
T Consensus 210 ----------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 210 ----------------------SATLAENMHAQ--GIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEES
T ss_pred ----------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 01234444443 7899999999999988777889999998 8999999999998765
Q ss_pred h
Q 015331 164 V 164 (409)
Q Consensus 164 v 164 (409)
.
T Consensus 266 ~ 266 (463)
T 2r9z_A 266 T 266 (463)
T ss_dssp C
T ss_pred C
Confidence 4
No 166
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.56 E-value=8.3e-08 Score=87.87 Aligned_cols=37 Identities=30% Similarity=0.539 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHH--cCCceEEEeCCCccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHR--LGIRSLVLESSESLR 40 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~--~g~~V~v~E~~~~~~ 40 (409)
++||+|||||||||++|+.|++ .|++|+|||+.+.++
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 4799999999999999999985 499999999987654
No 167
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.56 E-value=3.6e-07 Score=87.50 Aligned_cols=100 Identities=19% Similarity=0.216 Sum_probs=76.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +..+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~------------------- 209 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS------------------FDPM------------------- 209 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh------------------hhHH-------------------
Confidence 358999999999999999999999999999987642110 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCe-EEEEEcCCCEEecCEEEEcCCCch
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLF-KLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~-~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
-...+.+.|.+. +++++++++|.+++.++++ +.|.+.+|+++.+|.||.|+|..+
T Consensus 210 ----------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 210 ----------------------ISETLVEVMNAE--GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp ----------------------HHHHHHHHHHHH--SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred ----------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCc
Confidence 012244445444 7899999999999887543 788898998899999999999877
Q ss_pred Hh
Q 015331 163 VV 164 (409)
Q Consensus 163 ~v 164 (409)
.+
T Consensus 266 ~~ 267 (450)
T 1ges_A 266 AN 267 (450)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 168
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.56 E-value=8.1e-08 Score=93.11 Aligned_cols=108 Identities=19% Similarity=0.279 Sum_probs=72.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
++||+|||||++|+++|+.|+++ ++|+|||+.+.+...-. . .. ... .+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~-----~-----------------~~-----~~~----~g 155 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW-----L-----------------KG-----IKQ----EG 155 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG-----G-----------------TC-----SEE----TT
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee-----c-----------------cc-----ccc----CC
Confidence 46999999999999999999999 99999999875422100 0 00 000 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhC-CCCeEEeCceEEEEEEeCCeEEEEE-cCCC--EEecCEEEEcCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALEREL-PSGTIRYSSKVVSVEESGLFKLVNL-ADGA--VFKTKVLIGCDG 159 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~-~~~~i~~~~~v~~v~~~~~~~~v~~-~~g~--~~~ad~vV~AdG 159 (409)
+. . ...++...+.+.+ .+++++++++|.++..++..+.+.. .+++ .+.+|.||.|+|
T Consensus 156 -------~~-------~-----~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtG 216 (493)
T 1y56_A 156 -------FN-------K-----DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATG 216 (493)
T ss_dssp -------TT-------E-----EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCC
T ss_pred -------CC-------C-----CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCC
Confidence 00 0 1223444444443 3578889999999988777665544 4443 689999999999
Q ss_pred Cch
Q 015331 160 VNS 162 (409)
Q Consensus 160 ~~s 162 (409)
...
T Consensus 217 a~~ 219 (493)
T 1y56_A 217 AID 219 (493)
T ss_dssp EEE
T ss_pred CCc
Confidence 765
No 169
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.53 E-value=8.3e-08 Score=92.35 Aligned_cols=34 Identities=26% Similarity=0.640 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999876
No 170
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.49 E-value=1.3e-07 Score=90.73 Aligned_cols=40 Identities=23% Similarity=0.345 Sum_probs=36.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCC
Q 015331 2 EEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRV 41 (409)
Q Consensus 2 ~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~ 41 (409)
..++||+|||||++||++|..|+++|++|+|+|+++.++.
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 3568999999999999999999999999999999987643
No 171
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=8.4e-07 Score=84.92 Aligned_cols=100 Identities=21% Similarity=0.317 Sum_probs=72.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.... +.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~-------------------- 190 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY-----------------LD-------------------- 190 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------CC--------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc-----------------CC--------------------
Confidence 35689999999999999999999999999999887432110 00
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
.. + ...+.+.+.+. +++++++++|.+++.++....+.+ ++.++.+|.||.|+|..+
T Consensus 191 -----------------~~---~-~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 -----------------KE---F-TDVLTEEMEAN--NITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp -----------------HH---H-HHHHHHHHHTT--TEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEE
T ss_pred -----------------HH---H-HHHHHHHHHhC--CCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCC
Confidence 00 0 12233344332 789999999999987633334555 556799999999999876
Q ss_pred H
Q 015331 163 V 163 (409)
Q Consensus 163 ~ 163 (409)
.
T Consensus 247 ~ 247 (447)
T 1nhp_A 247 N 247 (447)
T ss_dssp S
T ss_pred C
Confidence 4
No 172
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.46 E-value=3e-07 Score=85.16 Aligned_cols=37 Identities=41% Similarity=0.591 Sum_probs=34.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC-Ccc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS-ESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~-~~~ 39 (409)
..+||+|||||++||++|+.|+++|++|+|+|++ +.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 4689999999999999999999999999999998 644
No 173
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.45 E-value=1.1e-06 Score=84.17 Aligned_cols=100 Identities=13% Similarity=0.232 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~-------------------- 211 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------FEK-------------------- 211 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------SCH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------cCH--------------------
Confidence 358999999999999999999999999999987643200 000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc---CCCEEecCEEEEcCCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA---DGAVFKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~---~g~~~~ad~vV~AdG~ 160 (409)
. + ...+.+.|.+. +++++.+++|.+++.+++.+.+++. ++.++.+|.||.|.|.
T Consensus 212 -----------------~---~-~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 268 (455)
T 1ebd_A 212 -----------------Q---M-AAIIKKRLKKK--GVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGR 268 (455)
T ss_dssp -----------------H---H-HHHHHHHHHHT--TCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCE
T ss_pred -----------------H---H-HHHHHHHHHHC--CCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCC
Confidence 0 0 12233444443 7899999999999988777777765 4567999999999998
Q ss_pred chHh
Q 015331 161 NSVV 164 (409)
Q Consensus 161 ~s~v 164 (409)
.+..
T Consensus 269 ~p~~ 272 (455)
T 1ebd_A 269 RPNT 272 (455)
T ss_dssp EESC
T ss_pred Cccc
Confidence 7643
No 174
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.45 E-value=1.7e-06 Score=83.44 Aligned_cols=100 Identities=21% Similarity=0.307 Sum_probs=76.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+-.. +.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~~------------------ 228 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK------------------FDECI------------------ 228 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCHHH------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc------------------cCHHH------------------
Confidence 358999999999999999999999999999987642210 00000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCe--EEEEEcCC-CEEecCEEEEcCCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLF--KLVNLADG-AVFKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~--~~v~~~~g-~~~~ad~vV~AdG~ 160 (409)
...+.+.|.+. +++++++++|.+++.++++ +.|.+.+| +++.+|.||.|.|.
T Consensus 229 -----------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 229 -----------------------QNTITDHYVKE--GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp -----------------------HHHHHHHHHHH--TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred -----------------------HHHHHHHHHhC--CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 11344455544 7899999999999876554 77888888 78999999999998
Q ss_pred chHh
Q 015331 161 NSVV 164 (409)
Q Consensus 161 ~s~v 164 (409)
.+..
T Consensus 284 ~p~~ 287 (479)
T 2hqm_A 284 KSHL 287 (479)
T ss_dssp EECC
T ss_pred CCcc
Confidence 7654
No 175
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.44 E-value=2.2e-07 Score=87.53 Aligned_cols=39 Identities=33% Similarity=0.470 Sum_probs=35.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHc-CCceEEEeCCCcc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRL-GIRSLVLESSESL 39 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~-g~~V~v~E~~~~~ 39 (409)
|++++||+|||||++||++|+.|+++ |++|+|+|+++.+
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 44578999999999999999999999 9999999998754
No 176
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.44 E-value=5.4e-07 Score=87.32 Aligned_cols=35 Identities=9% Similarity=0.234 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+.+|||||||+||+.+|..|++.+++|+|||+++.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 46899999999999999999999999999998763
No 177
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.44 E-value=1e-06 Score=85.03 Aligned_cols=100 Identities=20% Similarity=0.316 Sum_probs=74.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... . ..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~-----------------~~-------------------- 224 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-M-----------------DG-------------------- 224 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-S-----------------CH--------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-c-----------------CH--------------------
Confidence 358999999999999999999999999999988753221 0 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEE--eCCeEEEEEc-----CCCEEecCEEEE
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEE--SGLFKLVNLA-----DGAVFKTKVLIG 156 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~--~~~~~~v~~~-----~g~~~~ad~vV~ 156 (409)
.+ ...+.+.|.+. +++++++++|.+++. +++.+.|.+. ++.++.+|.||.
T Consensus 225 --------------------~~-~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~ 281 (478)
T 1v59_A 225 --------------------EV-AKATQKFLKKQ--GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLV 281 (478)
T ss_dssp --------------------HH-HHHHHHHHHHT--TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEE
T ss_pred --------------------HH-HHHHHHHHHHC--CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEE
Confidence 00 12233444433 789999999999987 5666777765 346799999999
Q ss_pred cCCCchHh
Q 015331 157 CDGVNSVV 164 (409)
Q Consensus 157 AdG~~s~v 164 (409)
|.|..+..
T Consensus 282 a~G~~p~~ 289 (478)
T 1v59_A 282 AVGRRPYI 289 (478)
T ss_dssp CSCEEECC
T ss_pred CCCCCcCC
Confidence 99987654
No 178
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.43 E-value=2.2e-07 Score=90.00 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
.++||+||||||+|+++|..|++.|.+|+|||+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 4689999999999999999999999999999984
No 179
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.43 E-value=9.8e-07 Score=84.07 Aligned_cols=110 Identities=16% Similarity=0.164 Sum_probs=68.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLG--IRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g--~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
+|+||||||||+++|..|++.| .+|+|||+++......++ +.. .+ +... ..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~-------l~~--~~---------~~~~--------~~- 54 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCA-------LPY--VI---------GEVV--------ED- 54 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGG-------HHH--HH---------TTSS--------CC-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcch-------hHH--HH---------cCCc--------cc-
Confidence 6999999999999999999988 479999988743221111 100 00 0000 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcC---CCEEecCEEEEcCCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLAD---GAVFKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~---g~~~~ad~vV~AdG~ 160 (409)
. . .........+ +.+. +++++.+++|+.++.....+.+.... +.++.+|.||.|+|.
T Consensus 55 -~--~------------~~~~~~~~~~---~~~~--~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 55 -R--R------------YALAYTPEKF---YDRK--QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGA 114 (437)
T ss_dssp -G--G------------GTBCCCHHHH---HHHH--CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCE
T ss_pred -h--h------------hhhhcCHHHH---HHhc--CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCC
Confidence 0 0 0001111222 2222 68899999999998877766665543 236889999999997
Q ss_pred ch
Q 015331 161 NS 162 (409)
Q Consensus 161 ~s 162 (409)
..
T Consensus 115 ~p 116 (437)
T 4eqs_A 115 SA 116 (437)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 180
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.42 E-value=1e-06 Score=83.02 Aligned_cols=105 Identities=18% Similarity=0.243 Sum_probs=66.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLG--IRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g--~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.+|||||||+||+++|..|++.+ .+|+|||+++.... .+.... +.......
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~-------~p~~~~----------v~~g~~~~---------- 55 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYT-------CYMSNE----------VIGGDREL---------- 55 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEEC-------STTHHH----------HHHTSSCG----------
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCC-------ccCHHH----------HhcCCCCH----------
Confidence 48999999999999999999876 58999998764211 111111 10000000
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
..+ ..+... +.+. ++++..+ +|+.|+.+.. +|.+.+|.++.+|.||.|+|...
T Consensus 56 ----~~~--------------~~~~~~----~~~~--gv~~i~~-~v~~id~~~~--~v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 56 ----ASL--------------RVGYDG----LRAH--GIQVVHD-SALGIDPDKK--LVKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp ----GGG--------------EECSHH----HHHT--TCEEECS-CEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred ----HHH--------------hhCHHH----HHHC--CCEEEEe-EEEEEEccCc--EEEecccceeecceeeeccCCcc
Confidence 000 011111 2222 5676654 7888876654 56778899999999999999865
Q ss_pred H
Q 015331 163 V 163 (409)
Q Consensus 163 ~ 163 (409)
.
T Consensus 109 ~ 109 (401)
T 3vrd_B 109 L 109 (401)
T ss_dssp C
T ss_pred c
Confidence 3
No 181
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.42 E-value=8.7e-07 Score=85.70 Aligned_cols=34 Identities=29% Similarity=0.422 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
.++||+||||||+|+++|+.|++.|.+|+|||+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4689999999999999999999999999999963
No 182
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.38 E-value=2.9e-06 Score=80.32 Aligned_cols=109 Identities=17% Similarity=0.278 Sum_probs=80.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.... +..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~-----------------~~~-------------------- 194 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV-----------------AGE-------------------- 194 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------SCH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh-----------------cCH--------------------
Confidence 4589999999999999999999999999999887531100 000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeE-EEEEcCCCEEecCEEEEcCCCch
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFK-LVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~-~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
. + ...+.+.+.+. +++++++++|..++.+++.+ .|.+.+|+++.||.||.|.|..+
T Consensus 195 -----------------~---~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 195 -----------------A---L-SEFYQAEHRAH--GVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp -----------------H---H-HHHHHHHHHHT--TCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred -----------------H---H-HHHHHHHHHhC--CCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 0 0 11233333333 78999999999999876665 68899999999999999999876
Q ss_pred H--hHhHhCCCC
Q 015331 163 V--VAKWLGFKK 172 (409)
Q Consensus 163 ~--vr~~lg~~~ 172 (409)
. +.+..|+..
T Consensus 252 ~~~l~~~~gl~~ 263 (415)
T 3lxd_A 252 CVGALISAGASG 263 (415)
T ss_dssp SCHHHHHTTCCC
T ss_pred ChHHHHhCCCCc
Confidence 4 344455543
No 183
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.38 E-value=1.4e-06 Score=82.35 Aligned_cols=109 Identities=23% Similarity=0.390 Sum_probs=80.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... .+ ..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~------------~~-----~~-------------------- 185 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR------------VL-----GR-------------------- 185 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH------------HH-----CH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh------------hc-----CH--------------------
Confidence 458999999999999999999999999999987653200 00 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
.+ ...+.+.+.+. +++++++++|..++.++....|.+.+|+++.||.||.|.|..+.
T Consensus 186 --------------------~~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 186 --------------------RI-GAWLRGLLTEL--GVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp --------------------HH-HHHHHHHHHHH--TCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred --------------------HH-HHHHHHHHHHC--CCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 00 12233444443 78999999999998776556789999999999999999998764
Q ss_pred --hHhHhCCCC
Q 015331 164 --VAKWLGFKK 172 (409)
Q Consensus 164 --vr~~lg~~~ 172 (409)
+.+.+|+..
T Consensus 243 ~~l~~~~gl~~ 253 (410)
T 3ef6_A 243 DQLARQAGLAC 253 (410)
T ss_dssp CHHHHHTTCCB
T ss_pred HHHHHhCCCcc
Confidence 345555543
No 184
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.37 E-value=2.5e-06 Score=82.47 Aligned_cols=100 Identities=21% Similarity=0.207 Sum_probs=76.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+-.. +.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~~------------------ 228 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG------------------ADRDL------------------ 228 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SCHHH------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------cCHHH------------------
Confidence 358999999999999999999999999999987642210 00000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcC----CCEEecCEEEEcCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLAD----GAVFKTKVLIGCDG 159 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~----g~~~~ad~vV~AdG 159 (409)
...+.+.|.+. +++++++++|.+++.+++.+.|++.+ |+++.+|.||.|.|
T Consensus 229 -----------------------~~~l~~~l~~~--gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G 283 (482)
T 1ojt_A 229 -----------------------VKVWQKQNEYR--FDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAG 283 (482)
T ss_dssp -----------------------HHHHHHHHGGG--EEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCC
T ss_pred -----------------------HHHHHHHHHhc--CCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcC
Confidence 11234444443 68999999999999888778888876 77799999999999
Q ss_pred CchHh
Q 015331 160 VNSVV 164 (409)
Q Consensus 160 ~~s~v 164 (409)
..+..
T Consensus 284 ~~p~~ 288 (482)
T 1ojt_A 284 RAPNG 288 (482)
T ss_dssp EEECG
T ss_pred CCcCC
Confidence 87654
No 185
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.36 E-value=3.2e-06 Score=82.49 Aligned_cols=106 Identities=20% Similarity=0.291 Sum_probs=79.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||..|+-+|..|++.|.+|+++|+.+.+... +..++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~~------------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------KDNET------------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------CSHHH-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------ccHHH-------------------
Confidence 58999999999999999999999999999987743210 00000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCe----EEEEEcCCC-EEecCEEEEcCC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLF----KLVNLADGA-VFKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~----~~v~~~~g~-~~~ad~vV~AdG 159 (409)
...+.+.|.+. +++++.+++|++++.++++ +.|++.+|+ ++.+|.||.|.|
T Consensus 258 ----------------------~~~l~~~l~~~--GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G 313 (523)
T 1mo9_A 258 ----------------------RAYVLDRMKEQ--GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLG 313 (523)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCC
T ss_pred ----------------------HHHHHHHHHhC--CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcC
Confidence 12344444443 7899999999999986555 778888887 899999999999
Q ss_pred CchHh---HhHhCCC
Q 015331 160 VNSVV---AKWLGFK 171 (409)
Q Consensus 160 ~~s~v---r~~lg~~ 171 (409)
..+.. .+.+|+.
T Consensus 314 ~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 314 EQPRSAELAKILGLD 328 (523)
T ss_dssp CEECCHHHHHHHTCC
T ss_pred CccCCccCHHHcCCc
Confidence 87754 3444543
No 186
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.34 E-value=2.7e-06 Score=80.21 Aligned_cols=109 Identities=19% Similarity=0.280 Sum_probs=79.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+.... +
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~-----------------~---------------------- 182 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV-----------------V---------------------- 182 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-----------------c----------------------
Confidence 3579999999999999999999999999999876431100 0
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeE-EEEEcCCCEEecCEEEEcCCCch
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFK-LVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~-~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
+.. + ...+.+.+.+. +++++++++|.+++.+++.+ .|.+.+|+++.||.||.|.|..+
T Consensus 183 ---------------~~~---~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 183 ---------------TPE---I-SSYFHDRHSGA--GIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp ---------------CHH---H-HHHHHHHHHHT--TCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred ---------------CHH---H-HHHHHHHHHhC--CcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 000 0 11233334333 78999999999999877665 58899999999999999999865
Q ss_pred H--hHhHhCCCC
Q 015331 163 V--VAKWLGFKK 172 (409)
Q Consensus 163 ~--vr~~lg~~~ 172 (409)
. +.+.+|+..
T Consensus 242 ~~~l~~~~gl~~ 253 (404)
T 3fg2_P 242 NVEIAAAAGLPT 253 (404)
T ss_dssp CCHHHHHTTCCB
T ss_pred CHHHHHhCCCCC
Confidence 4 345555543
No 187
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.33 E-value=3.7e-06 Score=81.03 Aligned_cols=108 Identities=23% Similarity=0.326 Sum_probs=80.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc-CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL-GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~-g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
..+|+|||||++|+-+|..|++. |.+|+++++.+.+....
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF--------------------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT---------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc---------------------------------------
Confidence 35899999999999999999999 99999999876431100
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
+. .. + ...+.+.+.+. +++++.+++|.+++.+++.++|.+.+|+++.+|.||.|.|..+
T Consensus 200 --------~~-------~~---~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 200 --------TS-------KS---L-SQMLRHDLEKN--DVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp --------SC-------HH---H-HHHHHHHHHHT--TCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEE
T ss_pred --------cC-------HH---H-HHHHHHHHHhc--CCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCc
Confidence 00 00 0 12233444433 7899999999999987778888899999999999999999865
Q ss_pred H--hHhHhCCC
Q 015331 163 V--VAKWLGFK 171 (409)
Q Consensus 163 ~--vr~~lg~~ 171 (409)
. +.+.+|+.
T Consensus 259 ~~~l~~~~gl~ 269 (472)
T 3iwa_A 259 NTQLARDAGLE 269 (472)
T ss_dssp CCHHHHHHTCC
T ss_pred CHHHHHhCCcc
Confidence 3 44455554
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=2.5e-06 Score=81.82 Aligned_cols=98 Identities=23% Similarity=0.349 Sum_probs=72.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +.+++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~~------------------ 214 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------------------YDSEL------------------ 214 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SCHHH------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------cCHHH------------------
Confidence 358999999999999999999999999999988753210 00000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCC--CEEecCEEEEcCCCc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADG--AVFKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g--~~~~ad~vV~AdG~~ 161 (409)
...+.+.|.+. +++++.+++|..++. ++ +.++..+| .++.+|.||.|+|..
T Consensus 215 -----------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 215 -----------------------TAPVAESLKKL--GIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp -----------------------HHHHHHHHHHH--TCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEE
T ss_pred -----------------------HHHHHHHHHHC--CCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCC
Confidence 11234444444 789999999999986 43 66664456 579999999999987
Q ss_pred hHh
Q 015331 162 SVV 164 (409)
Q Consensus 162 s~v 164 (409)
+..
T Consensus 268 p~~ 270 (458)
T 1lvl_A 268 PRT 270 (458)
T ss_dssp ECC
T ss_pred cCC
Confidence 643
No 189
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.32 E-value=6.3e-06 Score=81.29 Aligned_cols=106 Identities=24% Similarity=0.396 Sum_probs=78.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+++++.+.+... +..++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~~------------------- 194 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP------------------VDREM------------------- 194 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT------------------SCHHH-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh------------------cCHHH-------------------
Confidence 48999999999999999999999999999987642210 00000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEE-------------------eCCeEEEEEcC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEE-------------------SGLFKLVNLAD 145 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~-------------------~~~~~~v~~~~ 145 (409)
...+.+.|.+. +++++++++|.+++. .++.+.+.+.+
T Consensus 195 ----------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 250 (565)
T 3ntd_A 195 ----------------------AGFAHQAIRDQ--GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN 250 (565)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETT
T ss_pred ----------------------HHHHHHHHHHC--CCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcC
Confidence 12233444433 789999999999987 36677888889
Q ss_pred CCEEecCEEEEcCCCchH--hHhHhCCC
Q 015331 146 GAVFKTKVLIGCDGVNSV--VAKWLGFK 171 (409)
Q Consensus 146 g~~~~ad~vV~AdG~~s~--vr~~lg~~ 171 (409)
|+++.+|.||.|.|..+. +.+.+|+.
T Consensus 251 g~~i~~D~vi~a~G~~p~~~l~~~~g~~ 278 (565)
T 3ntd_A 251 GELLETDLLIMAIGVRPETQLARDAGLA 278 (565)
T ss_dssp SCEEEESEEEECSCEEECCHHHHHHTCC
T ss_pred CCEEEcCEEEECcCCccchHHHHhCCcc
Confidence 999999999999998764 33444543
No 190
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.30 E-value=6.6e-06 Score=79.82 Aligned_cols=100 Identities=19% Similarity=0.260 Sum_probs=77.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... +..+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~------------------- 224 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY------------------EDAD------------------- 224 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC------------------SSHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------cCHH-------------------
Confidence 358999999999999999999999999999987643210 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.|.+. +++++.+++|.+++.+++++.|.+.+|+++.+|.||.|.|..+.
T Consensus 225 ---------------------~-~~~l~~~l~~~--GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 225 ---------------------A-ALVLEESFAER--GVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred ---------------------H-HHHHHHHHHHC--CCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 0 12234444443 78999999999999887778888888889999999999998875
Q ss_pred h
Q 015331 164 V 164 (409)
Q Consensus 164 v 164 (409)
.
T Consensus 281 ~ 281 (499)
T 1xdi_A 281 T 281 (499)
T ss_dssp C
T ss_pred C
Confidence 4
No 191
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.30 E-value=1.1e-06 Score=91.71 Aligned_cols=36 Identities=33% Similarity=0.589 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+||||||||+++|..|+++|++|+|||+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999998754
No 192
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.30 E-value=6.9e-07 Score=83.42 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
..+||+|||||++|+++|+.|+++|.+|+|+|+++.+
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 4679999999999999999999999999999998754
No 193
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.29 E-value=6.3e-06 Score=79.97 Aligned_cols=99 Identities=21% Similarity=0.314 Sum_probs=75.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+-.. +..++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~~------------------- 219 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK------------------FDESV------------------- 219 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT------------------SCHHH-------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc------------------cchhh-------------------
Confidence 57999999999999999999999999999987642210 00000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCC-eEEEEEcCCCE-EecCEEEEcCCCch
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGL-FKLVNLADGAV-FKTKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~-~~~v~~~~g~~-~~ad~vV~AdG~~s 162 (409)
...+.+.|.+. +++++.+++|.+++.+++ .+.|.+.+|++ +.+|.||.|.|..+
T Consensus 220 ----------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 220 ----------------------INVLENDMKKN--NINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCC
T ss_pred ----------------------HHHHHHHHHhC--CCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCc
Confidence 11234444443 789999999999987653 47888889987 99999999999876
Q ss_pred Hh
Q 015331 163 VV 164 (409)
Q Consensus 163 ~v 164 (409)
..
T Consensus 276 ~~ 277 (500)
T 1onf_A 276 DT 277 (500)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 194
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.29 E-value=3.2e-06 Score=81.32 Aligned_cols=100 Identities=24% Similarity=0.338 Sum_probs=74.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... +.++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~------------------- 216 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT------------------LDED------------------- 216 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH-------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc------------------CCHH-------------------
Confidence 358999999999999999999999999999988753211 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHH-HhhCCCCeEEeCceEEEEEEeCCeEEEEEc--CC--CEEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEAL-ERELPSGTIRYSSKVVSVEESGLFKLVNLA--DG--AVFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l-~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~--~g--~~~~ad~vV~Ad 158 (409)
+ ...+.+.| .+. +++++++++|.+++.+++.+.+.+. +| .++.+|.||.|.
T Consensus 217 ---------------------~-~~~l~~~l~~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~ 272 (468)
T 2qae_A 217 ---------------------V-TNALVGALAKNE--KMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSV 272 (468)
T ss_dssp ---------------------H-HHHHHHHHHHHT--CCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECS
T ss_pred ---------------------H-HHHHHHHHhhcC--CcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECC
Confidence 0 12344445 333 7899999999999987766777776 66 579999999999
Q ss_pred CCchHh
Q 015331 159 GVNSVV 164 (409)
Q Consensus 159 G~~s~v 164 (409)
|..+..
T Consensus 273 G~~p~~ 278 (468)
T 2qae_A 273 GRRPFT 278 (468)
T ss_dssp CEEECC
T ss_pred CcccCC
Confidence 987653
No 195
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.29 E-value=3.9e-06 Score=80.89 Aligned_cols=100 Identities=21% Similarity=0.321 Sum_probs=74.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.... +.++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~-------------------- 221 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG-----------------IDME-------------------- 221 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------CCHH--------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------cCHH--------------------
Confidence 589999999999999999999999999999887532210 0000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCe-EEEEE-----cCCCEEecCEEEEcC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLF-KLVNL-----ADGAVFKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~-~~v~~-----~~g~~~~ad~vV~Ad 158 (409)
+ ...+.+.|.+. +++++++++|.+++.+++. +.+++ .++.++.+|.||.|.
T Consensus 222 --------------------~-~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~ 278 (474)
T 1zmd_A 222 --------------------I-SKNFQRILQKQ--GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCI 278 (474)
T ss_dssp --------------------H-HHHHHHHHHHT--TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECS
T ss_pred --------------------H-HHHHHHHHHHC--CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECc
Confidence 0 11234444443 7899999999999987765 66764 455689999999999
Q ss_pred CCchHh
Q 015331 159 GVNSVV 164 (409)
Q Consensus 159 G~~s~v 164 (409)
|..+..
T Consensus 279 G~~p~~ 284 (474)
T 1zmd_A 279 GRRPFT 284 (474)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 987643
No 196
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.28 E-value=3.7e-06 Score=80.56 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=74.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+++|||||+.|+-+|..|++.|.+|+++++.+.+.... +..+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~d~~------------------- 190 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY-----------------FDKE------------------- 190 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------CCHH-------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc-----------------CCHH-------------------
Confidence 3579999999999999999999999999999876431100 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.|.+. +++++.+++|.+++..++.+.|.++++ ++.+|.||.|.|....
T Consensus 191 ---------------------~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 191 ---------------------M-VAEVQKSLEKQ--AVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp ---------------------H-HHHHHHHHHTT--TEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred ---------------------H-HHHHHHHHHHc--CCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 0 12233444333 789999999999998777778888777 8999999999998654
No 197
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.28 E-value=7.9e-06 Score=78.51 Aligned_cols=100 Identities=21% Similarity=0.298 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... +..++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~~------------------ 214 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN------------------EDADV------------------ 214 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHHH------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------cCHHH------------------
Confidence 358999999999999999999999999999988643210 00000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc-CC--CEEecCEEEEcCCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA-DG--AVFKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~-~g--~~~~ad~vV~AdG~ 160 (409)
...+.+.|.+. +++++.+++|.+++.+++.+.+.+. +| .++.+|.||.|.|.
T Consensus 215 -----------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 215 -----------------------SKEIEKQFKKL--GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp -----------------------HHHHHHHHHHH--TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCE
T ss_pred -----------------------HHHHHHHHHHc--CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCC
Confidence 11234444444 7899999999999987766777775 56 57899999999998
Q ss_pred chHh
Q 015331 161 NSVV 164 (409)
Q Consensus 161 ~s~v 164 (409)
.+..
T Consensus 270 ~p~~ 273 (464)
T 2a8x_A 270 APNV 273 (464)
T ss_dssp EECC
T ss_pred CccC
Confidence 7643
No 198
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.28 E-value=4.9e-06 Score=80.52 Aligned_cols=99 Identities=15% Similarity=0.135 Sum_probs=76.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc---CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL---GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~---g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
.+++|||||+.|+-+|..|++. |.+|+|+|+.+.+-.. +..+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~d~~----------------- 232 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG------------------FDSE----------------- 232 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT------------------SCHH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc------------------cCHH-----------------
Confidence 5899999999999999999999 9999999988742210 0000
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCC-eEEEEEcCCCEEecCEEEEcCCC
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGL-FKLVNLADGAVFKTKVLIGCDGV 160 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~-~~~v~~~~g~~~~ad~vV~AdG~ 160 (409)
+ ...+.+.|.+. +++++++++|.+++.+++ .+.|++.+|+++.+|.||.|.|.
T Consensus 233 -----------------------~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 233 -----------------------L-RKQLTEQLRAN--GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp -----------------------H-HHHHHHHHHHT--TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred -----------------------H-HHHHHHHHHhC--CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 0 12344444443 789999999999988764 47888889988999999999998
Q ss_pred chHh
Q 015331 161 NSVV 164 (409)
Q Consensus 161 ~s~v 164 (409)
.+..
T Consensus 287 ~p~~ 290 (490)
T 1fec_A 287 VPRS 290 (490)
T ss_dssp EESC
T ss_pred CcCc
Confidence 7654
No 199
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.27 E-value=5.4e-06 Score=78.82 Aligned_cols=108 Identities=18% Similarity=0.244 Sum_probs=78.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.... +..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~-----------------~~~-------------------- 191 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV-----------------TAP-------------------- 191 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------------SCH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch-----------------hhH--------------------
Confidence 4589999999999999999999999999999866421100 000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEE--eCCeE-EEEEcCCCEEecCEEEEcCCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEE--SGLFK-LVNLADGAVFKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~--~~~~~-~v~~~~g~~~~ad~vV~AdG~ 160 (409)
. + ...+.+.+.+. +++++++++|.+++. +++.+ .|.+.+|+++.+|.||.|.|.
T Consensus 192 -----------------~---~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 192 -----------------P---V-SAFYEHLHREA--GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp -----------------H---H-HHHHHHHHHHH--TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred -----------------H---H-HHHHHHHHHhC--CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 0 0 11233444443 789999999999987 44444 688889989999999999997
Q ss_pred chH--hHhHhCCC
Q 015331 161 NSV--VAKWLGFK 171 (409)
Q Consensus 161 ~s~--vr~~lg~~ 171 (409)
.+. +.+.+|+.
T Consensus 249 ~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 249 IPNCELASAAGLQ 261 (431)
T ss_dssp EECCHHHHHTTCC
T ss_pred CcCcchhhccCCC
Confidence 653 34455554
No 200
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.27 E-value=4.4e-06 Score=78.86 Aligned_cols=104 Identities=18% Similarity=0.303 Sum_probs=76.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.... +..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~------------------- 188 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA-----------------APAT------------------- 188 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc-----------------cCHH-------------------
Confidence 4689999999999999999999999999999887421100 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.|.+. +++++.+++|.+++ ++ .|++.+|+++.+|.||.|.|..+.
T Consensus 189 ---------------------~-~~~l~~~l~~~--GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 189 ---------------------L-ADFVARYHAAQ--GVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred ---------------------H-HHHHHHHHHHc--CcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCcc
Confidence 0 12234444443 78999999999998 33 677888989999999999998753
Q ss_pred --hHhHhCCC
Q 015331 164 --VAKWLGFK 171 (409)
Q Consensus 164 --vr~~lg~~ 171 (409)
+.+.+|+.
T Consensus 241 ~~l~~~~gl~ 250 (408)
T 2gqw_A 241 DALARAAGLA 250 (408)
T ss_dssp CHHHHHHTCC
T ss_pred HHHHHhCCCC
Confidence 34455554
No 201
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.26 E-value=1.6e-06 Score=84.24 Aligned_cols=52 Identities=13% Similarity=0.260 Sum_probs=41.4
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCC----EEecCEEEEcCCCc
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGA----VFKTKVLIGCDGVN 161 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~----~~~ad~vV~AdG~~ 161 (409)
.+.+.|.+.++. +|+++++|+.|+.+++++.|++.+++ +++||.||.|.+..
T Consensus 242 ~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 444555555533 79999999999999888999887765 47999999999965
No 202
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.26 E-value=6.2e-07 Score=86.18 Aligned_cols=37 Identities=27% Similarity=0.485 Sum_probs=34.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|++++||+||||||+|+++|..|++.|++|+|||++.
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 7778999999999999999999999999999999873
No 203
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.25 E-value=6.5e-06 Score=79.67 Aligned_cols=98 Identities=18% Similarity=0.231 Sum_probs=74.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +..+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~------------------- 216 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL------------------QDEE------------------- 216 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC------------------CCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------CCHH-------------------
Confidence 358999999999999999999999999999988753211 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc--CC--CEEecCEEEEcCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA--DG--AVFKTKVLIGCDG 159 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~--~g--~~~~ad~vV~AdG 159 (409)
+ ...+.+.|.+ .++++.+++|..++.+++.+.+.+. +| .++.+|.||.|.|
T Consensus 217 ---------------------~-~~~l~~~l~~---~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G 271 (492)
T 3ic9_A 217 ---------------------M-KRYAEKTFNE---EFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATG 271 (492)
T ss_dssp ---------------------H-HHHHHHHHHT---TSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSC
T ss_pred ---------------------H-HHHHHHHHhh---CcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeC
Confidence 0 1223333433 2889999999999988888888775 66 5799999999999
Q ss_pred CchH
Q 015331 160 VNSV 163 (409)
Q Consensus 160 ~~s~ 163 (409)
....
T Consensus 272 ~~p~ 275 (492)
T 3ic9_A 272 RKAN 275 (492)
T ss_dssp CEES
T ss_pred CccC
Confidence 8764
No 204
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.25 E-value=1.1e-06 Score=83.56 Aligned_cols=40 Identities=20% Similarity=0.376 Sum_probs=36.8
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
|..++||+|||||++|+++|..|+++|++|+|+|+++.++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 6678999999999999999999999999999999987653
No 205
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.24 E-value=1.1e-05 Score=78.12 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=75.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHc---CCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEecc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL---GIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSV 81 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~---g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (409)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+-.. +.+++
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~d~~~---------------- 237 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG------------------FDETI---------------- 237 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT------------------SCHHH----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc------------------cCHHH----------------
Confidence 5899999999999999999999 9999999987642210 00000
Q ss_pred CCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCC-eEEEEEcCCCEEecCEEEEcCCC
Q 015331 82 SCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGL-FKLVNLADGAVFKTKVLIGCDGV 160 (409)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~-~~~v~~~~g~~~~ad~vV~AdG~ 160 (409)
...+.+.|.+. +++++++++|.+++.+++ .+.|++.+|+++.+|.||.|.|.
T Consensus 238 -------------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 238 -------------------------REEVTKQLTAN--GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp -------------------------HHHHHHHHHHT--TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred -------------------------HHHHHHHHHhC--CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 12234444443 789999999999987754 47888889989999999999998
Q ss_pred chHh
Q 015331 161 NSVV 164 (409)
Q Consensus 161 ~s~v 164 (409)
.+..
T Consensus 291 ~p~~ 294 (495)
T 2wpf_A 291 IPRT 294 (495)
T ss_dssp EECC
T ss_pred cccc
Confidence 7654
No 206
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.23 E-value=1e-05 Score=77.42 Aligned_cols=101 Identities=20% Similarity=0.260 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.... +..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~------------------- 192 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY-----------------FDKE------------------- 192 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-----------------SCHH-------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-----------------hhhh-------------------
Confidence 3589999999999999999999999999999876432100 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.|.+. +++++.+++|.+++.+++.+.....+|+++.+|.||.|.|....
T Consensus 193 ---------------------~-~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 193 ---------------------F-TDILAKDYEAH--GVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred ---------------------H-HHHHHHHHHHC--CCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 0 12233444443 78999999999998766666533347788999999999998764
Q ss_pred h
Q 015331 164 V 164 (409)
Q Consensus 164 v 164 (409)
.
T Consensus 249 ~ 249 (452)
T 2cdu_A 249 T 249 (452)
T ss_dssp C
T ss_pred H
Confidence 3
No 207
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.22 E-value=9.2e-06 Score=78.66 Aligned_cols=100 Identities=21% Similarity=0.331 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +..+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~------------------- 240 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG------------------MDGE------------------- 240 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc------------------CCHH-------------------
Confidence 357999999999999999999999999999987643210 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcC---C--CEEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLAD---G--AVFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~---g--~~~~ad~vV~Ad 158 (409)
+ ...+.+.|.+. +++++.+++|..++.+++.+.+.+.+ | .++.+|.||.|.
T Consensus 241 ---------------------~-~~~l~~~l~~~--gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~ 296 (491)
T 3urh_A 241 ---------------------V-AKQLQRMLTKQ--GIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIAT 296 (491)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECC
T ss_pred ---------------------H-HHHHHHHHHhC--CCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEee
Confidence 0 12234444443 78999999999999988888777763 4 478999999999
Q ss_pred CCchHh
Q 015331 159 GVNSVV 164 (409)
Q Consensus 159 G~~s~v 164 (409)
|.....
T Consensus 297 G~~p~~ 302 (491)
T 3urh_A 297 GRKPST 302 (491)
T ss_dssp CCEECC
T ss_pred CCccCC
Confidence 987643
No 208
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=3.5e-06 Score=81.19 Aligned_cols=100 Identities=23% Similarity=0.399 Sum_probs=74.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... +..+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------~~~~------------------- 219 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------MDAE------------------- 219 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------ccHH-------------------
Confidence 358999999999999999999999999999988753211 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc---CC--CEEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA---DG--AVFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~---~g--~~~~ad~vV~Ad 158 (409)
+ ...+.+.|.+. +++++.+++|.+++.+++.+.+.+. +| .++.+|.||.|.
T Consensus 220 ---------------------~-~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~ 275 (470)
T 1dxl_A 220 ---------------------I-RKQFQRSLEKQ--GMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSA 275 (470)
T ss_dssp ---------------------H-HHHHHHHHHHS--SCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCC
T ss_pred ---------------------H-HHHHHHHHHHc--CCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECC
Confidence 0 12234444443 7899999999999877666777765 44 579999999999
Q ss_pred CCchHh
Q 015331 159 GVNSVV 164 (409)
Q Consensus 159 G~~s~v 164 (409)
|..+..
T Consensus 276 G~~p~~ 281 (470)
T 1dxl_A 276 GRTPFT 281 (470)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 987643
No 209
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.21 E-value=6.6e-07 Score=85.67 Aligned_cols=37 Identities=22% Similarity=0.421 Sum_probs=33.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|++++||+|||||++|+++|..|++.|++|+|||++.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 7678999999999999999999999999999999873
No 210
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.21 E-value=7.5e-07 Score=85.65 Aligned_cols=36 Identities=25% Similarity=0.452 Sum_probs=32.1
Q ss_pred CCC-CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 1 MEE-DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 1 M~~-~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
|++ ++||+||||||+|+++|+.|+++|++|+|||+.
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 543 689999999999999999999999999999993
No 211
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.20 E-value=6.9e-06 Score=79.25 Aligned_cols=98 Identities=16% Similarity=0.295 Sum_probs=70.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +..+
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~------------------- 228 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI------------------YDGD------------------- 228 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc------------------CCHH-------------------
Confidence 468999999999999999999999999999987642210 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.+.+. +++++++++|.+++.++....+.++ +.++.+|.||.|.|..+.
T Consensus 229 ---------------------~-~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 229 ---------------------M-AEYIYKEADKH--HIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred ---------------------H-HHHHHHHHHHc--CcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 0 11233444433 7899999999999876433345554 457999999999998764
No 212
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.20 E-value=1.1e-05 Score=77.63 Aligned_cols=98 Identities=14% Similarity=0.172 Sum_probs=74.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+-.. . .+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------~-------------~~------------------- 217 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFRE------D-------------PA------------------- 217 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTS------C-------------HH-------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCCC------C-------------HH-------------------
Confidence 358999999999999999999999999999987642110 0 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.|.+. +++++.+++|.+++.+++.+.|.+. +.++.+|.||.|.|..+.
T Consensus 218 ---------------------~-~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 218 ---------------------I-GEAVTAAFRAE--GIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEES
T ss_pred ---------------------H-HHHHHHHHHhC--CCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcC
Confidence 0 12234444443 7899999999999988877778776 457999999999999875
Q ss_pred h
Q 015331 164 V 164 (409)
Q Consensus 164 v 164 (409)
.
T Consensus 273 ~ 273 (467)
T 1zk7_A 273 T 273 (467)
T ss_dssp C
T ss_pred C
Confidence 3
No 213
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.20 E-value=1.5e-06 Score=81.28 Aligned_cols=38 Identities=26% Similarity=0.525 Sum_probs=34.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
|+ ++||+|||||++|+++|+.|+++|++|+|+|+++.+
T Consensus 1 m~-~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 1 MK-SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp -C-CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CC-cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 54 589999999999999999999999999999998754
No 214
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.17 E-value=2.2e-05 Score=76.45 Aligned_cols=99 Identities=17% Similarity=0.094 Sum_probs=77.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
+.+++|||||+.|+-+|..+++.|.+|+|++++..... ..+++
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~-------------------~D~ei------------------ 265 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG-------------------FDQQC------------------ 265 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT-------------------SCHHH------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc-------------------cchhH------------------
Confidence 45899999999999999999999999999986432110 00100
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
...+.+.|.+. ++.++.++.+..++..++.+.|.+.++.++.+|.|+.|.|+...
T Consensus 266 -----------------------~~~l~~~l~~~--gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 266 -----------------------AVKVKLYMEEQ--GVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp -----------------------HHHHHHHHHHT--TCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEES
T ss_pred -----------------------HHHHHHHHHhh--cceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCC
Confidence 12244455444 78999999999999999999999999999999999999998765
Q ss_pred h
Q 015331 164 V 164 (409)
Q Consensus 164 v 164 (409)
+
T Consensus 321 t 321 (542)
T 4b1b_A 321 I 321 (542)
T ss_dssp C
T ss_pred c
Confidence 4
No 215
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.16 E-value=1.6e-06 Score=80.68 Aligned_cols=35 Identities=31% Similarity=0.554 Sum_probs=32.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
+||+|||||++|+++|+.|+++|++|+|+|+++.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 69999999999999999999999999999998754
No 216
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.16 E-value=1.2e-05 Score=77.74 Aligned_cols=99 Identities=16% Similarity=0.279 Sum_probs=71.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.... +.++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~------------------- 237 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY-----------------YDRD------------------- 237 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------SCHH-------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH-----------------HHHH-------------------
Confidence 4589999999999999999999999999999877432110 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.|.+. +++++.+++|++++.++....|.+ +++++.+|.||.|.|....
T Consensus 238 ---------------------~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 238 ---------------------L-TDLMAKNMEEH--GIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp ---------------------H-HHHHHHHHHTT--TCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred ---------------------H-HHHHHHHHHhC--CeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 0 12233444433 789999999999986332223555 6778999999999998664
No 217
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.15 E-value=1.3e-05 Score=72.79 Aligned_cols=96 Identities=15% Similarity=0.225 Sum_probs=69.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+... +.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------------~~------------------- 185 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAE--------------------KI------------------- 185 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCC--------------------HH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccC--------------------HH-------------------
Confidence 358999999999999999999999999999987642100 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeE-EEEEcC----C--CEEecCEEEE
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFK-LVNLAD----G--AVFKTKVLIG 156 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~-~v~~~~----g--~~~~ad~vV~ 156 (409)
+ ...+.+.|.+ .+++++++++|.+++.+++.+ .|.+.+ | .++.+|.||.
T Consensus 186 ---------------------~-~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~ 241 (320)
T 1trb_A 186 ---------------------L-IKRLMDKVEN--GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241 (320)
T ss_dssp ---------------------H-HHHHHHHHHT--SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEE
T ss_pred ---------------------H-HHHHHHhccc--CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEE
Confidence 0 1123333333 278999999999998776443 355544 4 4789999999
Q ss_pred cCCCch
Q 015331 157 CDGVNS 162 (409)
Q Consensus 157 AdG~~s 162 (409)
|.|..+
T Consensus 242 a~G~~p 247 (320)
T 1trb_A 242 AIGHSP 247 (320)
T ss_dssp CSCEEE
T ss_pred EeCCCC
Confidence 999654
No 218
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.15 E-value=2.4e-05 Score=75.70 Aligned_cols=108 Identities=26% Similarity=0.296 Sum_probs=77.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHH----cCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEe
Q 015331 4 DEDIVIVGAGIAGLTTSLALHR----LGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVAS 79 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~----~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 79 (409)
..+|+|||||+.|+-+|..|++ .|.+|+++++.+.+.... +...
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~-----------------l~~~--------------- 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI-----------------LPEY--------------- 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-----------------SCHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-----------------CCHH---------------
Confidence 3589999999999999999987 478899998765311000 0000
Q ss_pred ccCCcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCC
Q 015331 80 SVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDG 159 (409)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG 159 (409)
+ ...+.+.+.+. +++++.+++|..++.+++.+.|++.+|+++.||.||.|.|
T Consensus 228 -------------------------~-~~~~~~~l~~~--GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G 279 (493)
T 1m6i_A 228 -------------------------L-SNWTMEKVRRE--GVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVG 279 (493)
T ss_dssp -------------------------H-HHHHHHHHHTT--TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCC
T ss_pred -------------------------H-HHHHHHHHHhc--CCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCC
Confidence 0 11233344333 7899999999999987777889999999999999999999
Q ss_pred CchH--hHhHhCCC
Q 015331 160 VNSV--VAKWLGFK 171 (409)
Q Consensus 160 ~~s~--vr~~lg~~ 171 (409)
..+. +.+.+|+.
T Consensus 280 ~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 280 LEPNVELAKTGGLE 293 (493)
T ss_dssp EEECCTTHHHHTCC
T ss_pred CCccHHHHHHcCCc
Confidence 8764 34455544
No 219
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.14 E-value=1e-06 Score=85.37 Aligned_cols=37 Identities=24% Similarity=0.447 Sum_probs=33.5
Q ss_pred CCC-CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 1 MEE-DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 1 M~~-~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|++ ++||+||||||+|+++|..|++.|.+|+|||+++
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 443 4899999999999999999999999999999865
No 220
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.14 E-value=1.3e-06 Score=84.30 Aligned_cols=35 Identities=31% Similarity=0.553 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++||+||||||+|+++|+.|++.|++|+|||++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 35899999999999999999999999999999764
No 221
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.14 E-value=2.1e-05 Score=75.48 Aligned_cols=99 Identities=17% Similarity=0.245 Sum_probs=74.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+++|||||+.|+-+|..|++.|.+|+++++.+.+... +..+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~------------------~~~~------------------- 212 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR------------------FDQD------------------- 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------cCHH-------------------
Confidence 358999999999999999999999999999987632110 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCe-EEEE-EcCCCEEecCEEEEcCCCc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLF-KLVN-LADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~-~~v~-~~~g~~~~ad~vV~AdG~~ 161 (409)
+ ...+.+.|.+. +++++.+++|.+++.++++ +.|. +.+|+ +.+|.||.|.|..
T Consensus 213 ---------------------~-~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 213 ---------------------M-RRGLHAAMEEK--GIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred ---------------------H-HHHHHHHHHHC--CCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 0 12344444443 7899999999999987554 6788 88887 9999999999986
Q ss_pred hHh
Q 015331 162 SVV 164 (409)
Q Consensus 162 s~v 164 (409)
+..
T Consensus 268 p~~ 270 (463)
T 4dna_A 268 PNT 270 (463)
T ss_dssp ESC
T ss_pred cCC
Confidence 643
No 222
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.13 E-value=2.5e-06 Score=82.43 Aligned_cols=56 Identities=14% Similarity=0.383 Sum_probs=42.8
Q ss_pred HHHHHHHHHhhCCCCeEEeC--ceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchHh
Q 015331 107 RSLLMEALERELPSGTIRYS--SKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSVV 164 (409)
Q Consensus 107 r~~l~~~l~~~~~~~~i~~~--~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~v 164 (409)
-..+.+.|.+.+...+|+++ ++|++|+.++++| ++.+|+++.||.||.|.......
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~ 272 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLL 272 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHH
Confidence 35667777777754589999 4699999887765 45788889999999998765543
No 223
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.13 E-value=3e-05 Score=70.09 Aligned_cols=93 Identities=8% Similarity=0.136 Sum_probs=68.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+...
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCA----------------------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSC-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCC-----------------------------------------
Confidence 358999999999999999999999999999987632100
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeE-EEEEc---CCC--EEecCEEEEc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFK-LVNLA---DGA--VFKTKVLIGC 157 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~-~v~~~---~g~--~~~ad~vV~A 157 (409)
..+.+.|.+ ..+++++.++++.+++.+++.+ .|.+. +|+ ++.+|.||.|
T Consensus 182 ------------------------~~~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 236 (311)
T 2q0l_A 182 ------------------------PITLEHAKN-NDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIF 236 (311)
T ss_dssp ------------------------HHHHHHHHT-CTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred ------------------------HHHHHHHhh-CCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEE
Confidence 012222322 1378999999999998875543 45554 565 6899999999
Q ss_pred CCCch
Q 015331 158 DGVNS 162 (409)
Q Consensus 158 dG~~s 162 (409)
.|...
T Consensus 237 ~G~~p 241 (311)
T 2q0l_A 237 VGYDV 241 (311)
T ss_dssp SCEEE
T ss_pred ecCcc
Confidence 99643
No 224
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.12 E-value=1.2e-05 Score=73.52 Aligned_cols=92 Identities=14% Similarity=0.275 Sum_probs=69.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 35799999999999999999999999999998764211
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEE-EEEcC-----CCEEecCEEEEc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKL-VNLAD-----GAVFKTKVLIGC 157 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~-v~~~~-----g~~~~ad~vV~A 157 (409)
...+.+.+.+. .+++++.+++|.+++.+++.+. |.+.+ +.++.+|.||.|
T Consensus 211 -----------------------~~~~~~~l~~~-~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a 266 (338)
T 3itj_A 211 -----------------------STIMQKRAEKN-EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYA 266 (338)
T ss_dssp -----------------------CHHHHHHHHHC-TTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEEC
T ss_pred -----------------------CHHHHHHHHhc-CCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEE
Confidence 01123333322 3789999999999998776433 66654 357899999999
Q ss_pred CCCc
Q 015331 158 DGVN 161 (409)
Q Consensus 158 dG~~ 161 (409)
.|..
T Consensus 267 ~G~~ 270 (338)
T 3itj_A 267 IGHT 270 (338)
T ss_dssp SCEE
T ss_pred eCCC
Confidence 9964
No 225
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.12 E-value=1.4e-05 Score=77.01 Aligned_cols=100 Identities=22% Similarity=0.274 Sum_probs=75.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+... +..+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~------------------- 222 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA------------------VDEQ------------------- 222 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc------------------cCHH-------------------
Confidence 357999999999999999999999999999987642110 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCC---CEEecCEEEEcCCC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADG---AVFKTKVLIGCDGV 160 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g---~~~~ad~vV~AdG~ 160 (409)
+ ...+.+.|.+. +++++.+++|.+++.+++.+.+.+.++ .++.+|.||.|.|.
T Consensus 223 ---------------------~-~~~l~~~l~~~--Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 223 ---------------------V-AKEAQKILTKQ--GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp ---------------------H-HHHHHHHHHHT--TEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred ---------------------H-HHHHHHHHHhC--CCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 0 12234444443 789999999999998888888888765 57899999999998
Q ss_pred chHh
Q 015331 161 NSVV 164 (409)
Q Consensus 161 ~s~v 164 (409)
....
T Consensus 279 ~p~~ 282 (476)
T 3lad_A 279 RPVT 282 (476)
T ss_dssp EECC
T ss_pred cccC
Confidence 6543
No 226
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.11 E-value=1.8e-06 Score=85.75 Aligned_cols=40 Identities=30% Similarity=0.375 Sum_probs=34.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
|+.++||+|||||++|+++|+.|+++|++|+|||+.+...
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 4456899999999999999999999999999999987543
No 227
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.10 E-value=1.9e-05 Score=75.84 Aligned_cols=97 Identities=24% Similarity=0.322 Sum_probs=73.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+.... +.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~d---------------------- 213 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL-----------------ED---------------------- 213 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-----------------CC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC-----------------CC----------------------
Confidence 579999999999999999999999999999876421110 00
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeC-CeEEEEEc--CCC--EEecCEEEEcCC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESG-LFKLVNLA--DGA--VFKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~-~~~~v~~~--~g~--~~~ad~vV~AdG 159 (409)
.++.+.+.+.+. ++++.+++|.+++.++ +.+.|.+. +|+ ++.+|.||.|.|
T Consensus 214 -----------------------~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G 269 (466)
T 3l8k_A 214 -----------------------QDIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAG 269 (466)
T ss_dssp -----------------------HHHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCC
T ss_pred -----------------------HHHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcC
Confidence 112223333332 7899999999998877 78888887 565 799999999999
Q ss_pred CchHh
Q 015331 160 VNSVV 164 (409)
Q Consensus 160 ~~s~v 164 (409)
.....
T Consensus 270 ~~p~~ 274 (466)
T 3l8k_A 270 RRPVI 274 (466)
T ss_dssp EEECC
T ss_pred CCccc
Confidence 87644
No 228
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.08 E-value=2.5e-05 Score=77.41 Aligned_cols=105 Identities=24% Similarity=0.383 Sum_probs=76.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||++|+-+|..|++.|.+|+++++.+.+... +..+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~------------------- 229 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP------------------IDYE------------------- 229 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc------------------CCHH-------------------
Confidence 358999999999999999999999999999987642210 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.|.+. +++++.+++|..++.+++ .|.+.+|+++.+|.||.|.|..+.
T Consensus 230 ---------------------~-~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 230 ---------------------M-AAYVHEHMKNH--DVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred ---------------------H-HHHHHHHHHHc--CCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCCCCC
Confidence 0 12334444443 789999999999987655 466788889999999999998654
Q ss_pred --hHhHhCCC
Q 015331 164 --VAKWLGFK 171 (409)
Q Consensus 164 --vr~~lg~~ 171 (409)
+.+.+|+.
T Consensus 284 ~~~l~~~g~~ 293 (588)
T 3ics_A 284 SSLAKGAGLA 293 (588)
T ss_dssp CHHHHHTTCC
T ss_pred hHHHHhcCce
Confidence 33444543
No 229
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.08 E-value=1.8e-06 Score=83.59 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=32.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHH-cCCceEEEeC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHR-LGIRSLVLES 35 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~-~g~~V~v~E~ 35 (409)
|++++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 6667899999999999999999999 9999999994
No 230
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.08 E-value=2.9e-06 Score=81.13 Aligned_cols=36 Identities=25% Similarity=0.408 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+||+||||||+|+++|+.|+++|++|+|||+.+.+
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 479999999999999999999999999999998754
No 231
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=9e-06 Score=75.53 Aligned_cols=100 Identities=19% Similarity=0.247 Sum_probs=72.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.+.. +.+ +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~~-------------~-------------------- 184 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LDE-------------E-------------------- 184 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CCH-------------H--------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CCH-------------H--------------------
Confidence 5899999999999999999999999999998774321 000 0
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH-
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV- 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~- 163 (409)
+ ...+.+.|.+. +++++.+++|.+++ .+ .|.+.+|+ +.+|.||.|.|..+.
T Consensus 185 --------------------~-~~~l~~~l~~~--gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 185 --------------------L-SNMIKDMLEET--GVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp --------------------H-HHHHHHHHHHT--TEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEECC
T ss_pred --------------------H-HHHHHHHHHHC--CCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcCH
Confidence 0 12233444443 78999999999987 22 36677887 999999999998764
Q ss_pred -hHhHhCCC
Q 015331 164 -VAKWLGFK 171 (409)
Q Consensus 164 -vr~~lg~~ 171 (409)
+.+.+++.
T Consensus 237 ~ll~~~gl~ 245 (367)
T 1xhc_A 237 DLARRSGIH 245 (367)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhCCCC
Confidence 33444544
No 232
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.06 E-value=4.2e-06 Score=76.71 Aligned_cols=34 Identities=35% Similarity=0.582 Sum_probs=32.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+||+|||||+||+.+|+.|+++|.+|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 5999999999999999999999999999998873
No 233
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.04 E-value=8.9e-06 Score=78.13 Aligned_cols=136 Identities=11% Similarity=0.128 Sum_probs=77.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCccCCcce----eEEechhHHHHHHHcCCchHHHhhcccccCeEE
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSESLRVTGF----AITLWTNAWRALDAVGISDSLRQQHIQLQGMVV 77 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~~~~~~~----~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 77 (409)
..+|+|||||.+|+-+|..|++. |.+|+++++.+.+..... ...+.+...+.+..+ .+.........
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l--~~~~~~~~~~~----- 299 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSR--EHAERERLLRE----- 299 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHS--CHHHHHHHHHH-----
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcC--CHHHHHHHHHH-----
Confidence 45899999999999999999998 899999999886432110 001112222222222 11110000000
Q ss_pred EeccCCcccccccccccCCCCCccccccCHHHHHHHHHhh---CCCCeEEeCceEEEEEEeCCeEEEEEc---CCC--EE
Q 015331 78 ASSVSCQPASEISFKTKGNRGGHEVRSVKRSLLMEALERE---LPSGTIRYSSKVVSVEESGLFKLVNLA---DGA--VF 149 (409)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~---~~~~~i~~~~~v~~v~~~~~~~~v~~~---~g~--~~ 149 (409)
. ....+. ......+ .........+. -.+++++.+++|+.++.+++.+.|++. +|+ ++
T Consensus 300 ----~----~~~~~~------~~~~~~~-~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~ 364 (463)
T 3s5w_A 300 ----Y----HNTNYS------VVDTDLI-ERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVE 364 (463)
T ss_dssp ----T----GGGTSS------CBCHHHH-HHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred ----h----hccCCC------cCCHHHH-HHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEE
Confidence 0 000000 0000000 11111111111 147899999999999999888888887 665 48
Q ss_pred ecCEEEEcCCCc
Q 015331 150 KTKVLIGCDGVN 161 (409)
Q Consensus 150 ~ad~vV~AdG~~ 161 (409)
.+|.||.|+|..
T Consensus 365 ~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 365 TYDAVILATGYE 376 (463)
T ss_dssp EESEEEECCCEE
T ss_pred ECCEEEEeeCCC
Confidence 999999999965
No 234
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.03 E-value=4.5e-05 Score=73.52 Aligned_cols=98 Identities=18% Similarity=0.109 Sum_probs=72.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+-.. +..++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~~~------------------- 230 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS------------------FDSMI------------------- 230 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCHHH-------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc------------------cCHHH-------------------
Confidence 58999999999999999999999999999987642110 00000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCe--EEEEEcC---C----CEEecCEEE
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLF--KLVNLAD---G----AVFKTKVLI 155 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~--~~v~~~~---g----~~~~ad~vV 155 (409)
...+.+.|.+. +++++.+++|..++.++++ +.+.+.+ + .++.+|.||
T Consensus 231 ----------------------~~~~~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 231 ----------------------STNCTEELENA--GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEE
T ss_pred ----------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEE
Confidence 12344444443 7899999999999877554 6677765 2 578999999
Q ss_pred EcCCCchH
Q 015331 156 GCDGVNSV 163 (409)
Q Consensus 156 ~AdG~~s~ 163 (409)
.|.|....
T Consensus 287 ~a~G~~p~ 294 (478)
T 3dk9_A 287 WAIGRVPN 294 (478)
T ss_dssp ECSCEEES
T ss_pred EeeccccC
Confidence 99998654
No 235
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.03 E-value=4e-06 Score=84.61 Aligned_cols=37 Identities=32% Similarity=0.522 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.++||+||||||+|+++|+.|+++|++|+|||+++..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4579999999999999999999999999999998753
No 236
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.02 E-value=4e-06 Score=81.34 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++||+||||||+|+++|..|++.|.+|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999985
No 237
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.00 E-value=3e-05 Score=71.87 Aligned_cols=104 Identities=13% Similarity=0.195 Sum_probs=70.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+++++.+.+.... + +. .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~---------------~-------------------d~-~-- 209 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD---------------A-------------------DP-S-- 209 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------------C-T--
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC---------------C-------------------CC-C--
Confidence 489999999999999999999999999999876421100 0 00 0
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCC-CeEEeCceEEEEEEeCCeEEEEEcCCCEEe-cCEEEEcCCCch
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPS-GTIRYSSKVVSVEESGLFKLVNLADGAVFK-TKVLIGCDGVNS 162 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~-~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~-ad~vV~AdG~~s 162 (409)
..++ . -.+..+.+.|.+ .+ ++++.+++|..++.+++.+.|.+.+|+++. +|.||.|+|...
T Consensus 210 ----~~~~-------~----~~~~~l~~~l~~--~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 210 ----VRLS-------P----YTRQRLGNVIKQ--GARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp ----TSCC-------H----HHHHHHHHHHHT--TCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCG
T ss_pred ----ccCC-------H----HHHHHHHHHHhh--CCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCC
Confidence 0000 0 002233444433 24 899999999999877778888888887665 599999999654
No 238
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.00 E-value=4.6e-05 Score=69.34 Aligned_cols=92 Identities=16% Similarity=0.228 Sum_probs=67.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+...
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRAN------------------------------------------ 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcc------------------------------------------
Confidence 57999999999999999999999999999987642100
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc---CCC--EEecCEEEEcCC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA---DGA--VFKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~---~g~--~~~ad~vV~AdG 159 (409)
..+.+.+.+ ..+++++.+++|+++..++....|.+. +|+ ++.+|.||.|.|
T Consensus 191 -----------------------~~~~~~l~~-~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 191 -----------------------KVAQARAFA-NPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp -----------------------HHHHHHHHT-CTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred -----------------------hHHHHHHHh-cCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 011222222 137899999999999876443345554 565 689999999999
Q ss_pred Cch
Q 015331 160 VNS 162 (409)
Q Consensus 160 ~~s 162 (409)
...
T Consensus 247 ~~p 249 (325)
T 2q7v_A 247 HVP 249 (325)
T ss_dssp EEE
T ss_pred CCC
Confidence 543
No 239
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.98 E-value=4.8e-05 Score=69.02 Aligned_cols=91 Identities=12% Similarity=0.211 Sum_probs=66.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+++++.+.+...
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~------------------------------------------ 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCE------------------------------------------ 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCC------------------------------------------
Confidence 57999999999999999999999999999976532100
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCC-eEEEEEc---CCC--EEecCEEEEcC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGL-FKLVNLA---DGA--VFKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~-~~~v~~~---~g~--~~~ad~vV~Ad 158 (409)
..+.+.+.+ .+++++++++|.++..+++ ...|.+. +|+ ++.+|.||.|.
T Consensus 194 -----------------------~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 248 (319)
T 3cty_A 194 -----------------------NAYVQEIKK--RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYV 248 (319)
T ss_dssp -----------------------HHHHHHHHH--TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECC
T ss_pred -----------------------HHHHHHHhc--CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEee
Confidence 012223332 2789999999999987755 2235443 564 68999999999
Q ss_pred CCch
Q 015331 159 GVNS 162 (409)
Q Consensus 159 G~~s 162 (409)
|..+
T Consensus 249 G~~p 252 (319)
T 3cty_A 249 GLIP 252 (319)
T ss_dssp CEEE
T ss_pred CCcc
Confidence 9653
No 240
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.97 E-value=5.2e-05 Score=69.24 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=69.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.+... +..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~--------------------~~~------------------- 193 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH--------------------EAS------------------- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC--------------------HHH-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc--------------------HHH-------------------
Confidence 58999999999999999999999999999987642110 000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc---CC--CEEecCEEEEcCC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA---DG--AVFKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~---~g--~~~~ad~vV~AdG 159 (409)
...+.+.+.+. +++++.+++|.+++.+++...|.+. +| .++.+|.||.|.|
T Consensus 194 ----------------------~~~l~~~l~~~--gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2zbw_A 194 ----------------------VKELMKAHEEG--RLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAG 249 (335)
T ss_dssp ----------------------HHHHHHHHHTT--SSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ----------------------HHHHHhccccC--CeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeec
Confidence 01233344332 7899999999999885543355554 66 4789999999999
Q ss_pred Cch
Q 015331 160 VNS 162 (409)
Q Consensus 160 ~~s 162 (409)
..+
T Consensus 250 ~~p 252 (335)
T 2zbw_A 250 YIT 252 (335)
T ss_dssp EEE
T ss_pred CCC
Confidence 654
No 241
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.93 E-value=7.6e-05 Score=67.58 Aligned_cols=93 Identities=13% Similarity=0.278 Sum_probs=70.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~----------------------------------------- 192 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQ----------------------------------------- 192 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCSC-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcC-----------------------------------------
Confidence 358999999999999999999999999999987642210
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcC---CC--EEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLAD---GA--VFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~---g~--~~~ad~vV~Ad 158 (409)
..+.+.+.+ ..+++++.+++|.+++.++....|.+.+ |+ ++.+|.||.|.
T Consensus 193 ------------------------~~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~ 247 (323)
T 3f8d_A 193 ------------------------PIYVETVKK-KPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEI 247 (323)
T ss_dssp ------------------------HHHHHHHHT-CTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECC
T ss_pred ------------------------HHHHHHHHh-CCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEE
Confidence 011122222 2378999999999998876655576665 65 78999999999
Q ss_pred CCch
Q 015331 159 GVNS 162 (409)
Q Consensus 159 G~~s 162 (409)
|...
T Consensus 248 G~~p 251 (323)
T 3f8d_A 248 GFDP 251 (323)
T ss_dssp CEEC
T ss_pred CCCC
Confidence 9754
No 242
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.93 E-value=6.3e-05 Score=67.85 Aligned_cols=91 Identities=18% Similarity=0.276 Sum_probs=66.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. +
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---------------------~--------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---------------------D--------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS---------------------C---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc---------------------c---------------------
Confidence 5799999999999999999999999999998764210 0
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeE-EEEEcC---CC--EEecCEEEEcC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFK-LVNLAD---GA--VFKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~-~v~~~~---g~--~~~ad~vV~Ad 158 (409)
..+.+.|.+ ..+++++.+++++++..+++.+ .|.+.+ |+ ++.+|.||.|.
T Consensus 183 -----------------------~~~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 238 (310)
T 1fl2_A 183 -----------------------QVLQDKLRS-LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQI 238 (310)
T ss_dssp -----------------------HHHHHHHHT-CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECS
T ss_pred -----------------------HHHHHHHhh-CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEee
Confidence 012233332 2378999999999998765543 455543 43 68999999999
Q ss_pred CCc
Q 015331 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 239 G~~ 241 (310)
T 1fl2_A 239 GLL 241 (310)
T ss_dssp CEE
T ss_pred CCc
Confidence 954
No 243
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.93 E-value=4.9e-05 Score=72.64 Aligned_cols=105 Identities=23% Similarity=0.371 Sum_probs=72.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+.... +.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~--------------------- 190 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS-----------------FDK--------------------- 190 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------SCH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------cCH---------------------
Confidence 489999999999999999999999999999876421100 000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH-
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV- 163 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~- 163 (409)
. + ...+.+.|.+ .++++.++.|..++.++ .+...+.++.++.+|.||.|.|....
T Consensus 191 ----------------~---~-~~~l~~~l~~---~v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 191 ----------------E---V-TDILEEKLKK---HVNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKPNI 246 (449)
T ss_dssp ----------------H---H-HHHHHHHHTT---TSEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEECC
T ss_pred ----------------H---H-HHHHHHHHHh---CcEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCccCH
Confidence 0 0 1123333332 27899999999998665 34333556778999999999998653
Q ss_pred -hHhHhCCC
Q 015331 164 -VAKWLGFK 171 (409)
Q Consensus 164 -vr~~lg~~ 171 (409)
+.+.+|+.
T Consensus 247 ~l~~~~gl~ 255 (449)
T 3kd9_A 247 ELAKQLGVR 255 (449)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhCCcc
Confidence 34445543
No 244
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.92 E-value=3e-05 Score=71.75 Aligned_cols=95 Identities=21% Similarity=0.230 Sum_probs=68.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+... +.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~--------------------~~~------------------- 204 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH--------------------GKT------------------- 204 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC--------------------SHH-------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC--------------------HHH-------------------
Confidence 47999999999999999999999999999987643110 000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeE-EEEE--cCC--CEEecCEEEEcCC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFK-LVNL--ADG--AVFKTKVLIGCDG 159 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~-~v~~--~~g--~~~~ad~vV~AdG 159 (409)
...+.+.+.+. +++++++++|.+++.+++.+ .|.+ .+| .++.+|.||.|.|
T Consensus 205 ----------------------~~~l~~~~~~~--gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 205 ----------------------AHEVERARANG--TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIG 260 (360)
T ss_dssp ----------------------HHSSHHHHHHT--SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCC
T ss_pred ----------------------HHHHHHHhhcC--ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCC
Confidence 00122222222 68999999999998876643 3444 367 4789999999999
Q ss_pred Cch
Q 015331 160 VNS 162 (409)
Q Consensus 160 ~~s 162 (409)
..+
T Consensus 261 ~~p 263 (360)
T 3ab1_A 261 FKS 263 (360)
T ss_dssp BCC
T ss_pred CCC
Confidence 653
No 245
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.92 E-value=9.3e-05 Score=66.77 Aligned_cols=92 Identities=16% Similarity=0.249 Sum_probs=68.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~----------------------------------------- 185 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAA----------------------------------------- 185 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSC-----------------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCC-----------------------------------------
Confidence 357999999999999999999999999999987643110
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeE-EEEEc--CCC--EEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFK-LVNLA--DGA--VFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~-~v~~~--~g~--~~~ad~vV~Ad 158 (409)
..+.+.+.+ ..+++++++++|.+++.+++.+ .|.+. +|+ ++.+|.||.|.
T Consensus 186 ------------------------~~~~~~~~~-~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~ 240 (315)
T 3r9u_A 186 ------------------------PSTVEKVKK-NEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFV 240 (315)
T ss_dssp ------------------------HHHHHHHHH-CTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECS
T ss_pred ------------------------HHHHHHHHh-cCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEE
Confidence 011122222 2378999999999998887543 24444 775 78999999999
Q ss_pred CCc
Q 015331 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 241 G~~ 243 (315)
T 3r9u_A 241 GLN 243 (315)
T ss_dssp CEE
T ss_pred cCC
Confidence 964
No 246
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.92 E-value=6.2e-06 Score=79.07 Aligned_cols=33 Identities=24% Similarity=0.589 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
++||+||||||+|+++|..|++.|.+|+|||+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 589999999999999999999999999999983
No 247
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.92 E-value=6.9e-06 Score=79.44 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEeC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHR-LGIRSLVLES 35 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~-~g~~V~v~E~ 35 (409)
.++||+||||||+|+++|+.|++ .|.+|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 46899999999999999999999 9999999993
No 248
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.91 E-value=7.3e-05 Score=72.13 Aligned_cols=97 Identities=22% Similarity=0.209 Sum_probs=70.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+++|||||+.|+-+|..|++.|.+|+++++...... +..+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~d~~-------------------- 228 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG-------------------FDQQ-------------------- 228 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT-------------------SCHH--------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc-------------------cCHH--------------------
Confidence 5799999999999999999999999999997421100 0000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCC-eEEEEEcCCC-----EEecCEEEEcC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGL-FKLVNLADGA-----VFKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~-~~~v~~~~g~-----~~~ad~vV~Ad 158 (409)
+ ...+.+.|.+. +++++.+++|..++..++ .+.|++.++. ++.+|.||.|.
T Consensus 229 --------------------~-~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~ 285 (483)
T 3dgh_A 229 --------------------M-AELVAASMEER--GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAI 285 (483)
T ss_dssp --------------------H-HHHHHHHHHHT--TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECS
T ss_pred --------------------H-HHHHHHHHHhC--CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECc
Confidence 0 12234444443 789999999999988654 4677776654 78999999999
Q ss_pred CCchH
Q 015331 159 GVNSV 163 (409)
Q Consensus 159 G~~s~ 163 (409)
|....
T Consensus 286 G~~p~ 290 (483)
T 3dgh_A 286 GRKGL 290 (483)
T ss_dssp CEEEC
T ss_pred ccccC
Confidence 98654
No 249
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.91 E-value=6.5e-05 Score=71.42 Aligned_cols=95 Identities=15% Similarity=0.319 Sum_probs=71.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... ..++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~------------------~d~~------------------- 189 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL------------------MDAD------------------- 189 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT------------------SCGG-------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc------------------ccch-------------------
Confidence 358999999999999999999999999999987642110 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV 163 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 163 (409)
+ ...+.+.|.++ +++++.+++|..++.. .+.+.+|+++.+|.||.|.|....
T Consensus 190 ---------------------~-~~~~~~~l~~~--gV~i~~~~~v~~~~~~----~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 190 ---------------------M-NQPILDELDKR--EIPYRLNEEINAINGN----EITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp ---------------------G-GHHHHHHHHHT--TCCEEESCCEEEEETT----EEEETTSCEEECSEEEECCCEEES
T ss_pred ---------------------h-HHHHHHHhhcc--ceEEEeccEEEEecCC----eeeecCCeEEeeeeEEEEeceecC
Confidence 0 12344555544 7899999999887532 477889999999999999997653
No 250
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.86 E-value=1.2e-05 Score=81.64 Aligned_cols=36 Identities=25% Similarity=0.466 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+||+||||||||+++|..|+++|++|+|||+.+.+
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 479999999999999999999999999999998753
No 251
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.85 E-value=9.3e-06 Score=77.66 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-c------CCceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHR-L------GIRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~-~------g~~V~v~E~~~~~ 39 (409)
+++||+||||||+|+++|..|++ . |.+|+|||+.+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 36799999999999999999999 7 9999999998754
No 252
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.85 E-value=9.8e-05 Score=71.31 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=70.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||||+.|+-+|..|++.|.+|+++++...... +..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~d~~------------------- 226 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG-------------------FDQQ------------------- 226 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------SCHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc-------------------CCHH-------------------
Confidence 34799999999999999999999999999997531100 0000
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEe-CCeEEEEEcC---CC--EEecCEEEEc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEES-GLFKLVNLAD---GA--VFKTKVLIGC 157 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~-~~~~~v~~~~---g~--~~~ad~vV~A 157 (409)
+ ...+.+.|.+. +++++.++.+..++.. ++.+.|.+.+ |+ ++.+|.||.|
T Consensus 227 ---------------------~-~~~l~~~l~~~--gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a 282 (488)
T 3dgz_A 227 ---------------------M-SSLVTEHMESH--GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWA 282 (488)
T ss_dssp ---------------------H-HHHHHHHHHHT--TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEEC
T ss_pred ---------------------H-HHHHHHHHHHC--CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEc
Confidence 0 12233444443 7899999999999874 4456666654 44 4789999999
Q ss_pred CCCchH
Q 015331 158 DGVNSV 163 (409)
Q Consensus 158 dG~~s~ 163 (409)
.|....
T Consensus 283 ~G~~p~ 288 (488)
T 3dgz_A 283 IGRVPE 288 (488)
T ss_dssp SCEEES
T ss_pred ccCCcc
Confidence 998654
No 253
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.85 E-value=0.00012 Score=66.63 Aligned_cols=93 Identities=15% Similarity=0.272 Sum_probs=67.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------ 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA------------------------------------------ 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc------------------------------------------
Confidence 35899999999999999999999999999998764310
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCC--eE-EEEEc---CC--CEEecCEEE
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGL--FK-LVNLA---DG--AVFKTKVLI 155 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~--~~-~v~~~---~g--~~~~ad~vV 155 (409)
...+.+.+.+ -.+++++++++|.+++.+++ .+ .|.+. +| .++.+|.||
T Consensus 197 -----------------------~~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi 252 (333)
T 1vdc_A 197 -----------------------SKIMQQRALS-NPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLF 252 (333)
T ss_dssp -----------------------CHHHHHHHHT-CTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred -----------------------cHHHHHHHHh-CCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEE
Confidence 0011112221 13789999999999987764 32 25443 34 478999999
Q ss_pred EcCCCch
Q 015331 156 GCDGVNS 162 (409)
Q Consensus 156 ~AdG~~s 162 (409)
.|.|...
T Consensus 253 ~a~G~~p 259 (333)
T 1vdc_A 253 FAIGHEP 259 (333)
T ss_dssp ECSCEEE
T ss_pred EEeCCcc
Confidence 9999643
No 254
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.82 E-value=1.2e-05 Score=79.81 Aligned_cols=34 Identities=26% Similarity=0.543 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
.++||+||||||||+++|..|+++|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 3589999999999999999999999999999974
No 255
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.80 E-value=1.3e-05 Score=78.12 Aligned_cols=35 Identities=26% Similarity=0.495 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|||+||||||+|+.+|..+++.|.+|+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 38999999999999999999999999999998653
No 256
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.80 E-value=2e-05 Score=79.04 Aligned_cols=37 Identities=24% Similarity=0.623 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.++
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4799999999999999999999999999999987653
No 257
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.79 E-value=2.4e-05 Score=80.07 Aligned_cols=37 Identities=24% Similarity=0.623 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
.++|+|||||++||++|+.|+++|++|+|||+.+.++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 4699999999999999999999999999999987653
No 258
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.79 E-value=0.00011 Score=71.68 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35899999999999999999999999999999986
No 259
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.78 E-value=4.4e-05 Score=74.65 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=32.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+|+|||+|.+|+-+|..|++.+.+|+|+++.+..
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 58999999999999999999999999999999863
No 260
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.78 E-value=1.9e-05 Score=79.46 Aligned_cols=36 Identities=22% Similarity=0.470 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
++||+||||||||+++|..|+++|++|+|||+.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 579999999999999999999999999999998754
No 261
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.75 E-value=1.9e-05 Score=77.42 Aligned_cols=36 Identities=33% Similarity=0.490 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+||||||++|+.+|..|++.|++|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999864
No 262
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.74 E-value=0.00011 Score=67.15 Aligned_cols=92 Identities=14% Similarity=0.249 Sum_probs=65.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. ..
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---------------------------------------~~- 194 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---------------------------------------SK- 194 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---------------------------------------CT-
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---------------------------------------cH-
Confidence 35899999999999999999999999999998764210 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEc---CC--CEEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLA---DG--AVFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~---~g--~~~~ad~vV~Ad 158 (409)
.+.+.+.+ -.+++++.+++|.+++.+++...|.+. +| .++.+|.||.|.
T Consensus 195 -------------------------~~~~~~~~-~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~ 248 (335)
T 2a87_A 195 -------------------------IMLDRARN-NDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAI 248 (335)
T ss_dssp -------------------------THHHHHHH-CTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECS
T ss_pred -------------------------HHHHHHhc-cCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEcc
Confidence 01111222 237899999999999876543234333 34 478999999999
Q ss_pred CCc
Q 015331 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 249 G~~ 251 (335)
T 2a87_A 249 GHE 251 (335)
T ss_dssp CEE
T ss_pred CCc
Confidence 954
No 263
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.72 E-value=1.8e-05 Score=77.22 Aligned_cols=36 Identities=39% Similarity=0.511 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHR-LGIRSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~-~g~~V~v~E~~~~ 38 (409)
++||+||||||++|+.+|..|++ .|++|+|+|+.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 46899999999999999999997 7899999999863
No 264
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.71 E-value=2.7e-05 Score=74.51 Aligned_cols=37 Identities=24% Similarity=0.288 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC--CceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLG--IRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g--~~V~v~E~~~~~ 39 (409)
.++||+||||||+|+.+|..|++.| ++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 4579999999999999999999998 999999998754
No 265
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.70 E-value=7.5e-05 Score=67.94 Aligned_cols=91 Identities=13% Similarity=0.189 Sum_probs=67.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... +.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~--------------------~~------------------- 194 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH--------------------EH------------------- 194 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC--------------------HH-------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc--------------------HH-------------------
Confidence 357999999999999999999999999999987642110 00
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcC-----CCEEecCEEEEcC
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLAD-----GAVFKTKVLIGCD 158 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~-----g~~~~ad~vV~Ad 158 (409)
..+.|.+ .+++++.+++|..++.+++...|.+.+ +.++.+|.||.|.
T Consensus 195 --------------------------~~~~l~~--~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~ 246 (332)
T 3lzw_A 195 --------------------------SVENLHA--SKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNY 246 (332)
T ss_dssp --------------------------HHHHHHH--SSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECC
T ss_pred --------------------------HHHHHhc--CCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEee
Confidence 0111222 278999999999998776655566655 3468999999999
Q ss_pred CCc
Q 015331 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 247 G~~ 249 (332)
T 3lzw_A 247 GFV 249 (332)
T ss_dssp CEE
T ss_pred ccC
Confidence 954
No 266
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.67 E-value=3.3e-05 Score=81.27 Aligned_cols=36 Identities=31% Similarity=0.491 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~~ 39 (409)
.+||+||||||||+++|..|+++|+ +|+|||+.+.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 4699999999999999999999999 79999998643
No 267
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.65 E-value=1.5e-05 Score=77.88 Aligned_cols=35 Identities=34% Similarity=0.456 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|+||||||.||+.+|..|++ |.+|+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 35899999999999999999999 999999999864
No 268
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.63 E-value=0.00015 Score=64.69 Aligned_cols=85 Identities=14% Similarity=0.137 Sum_probs=63.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSC 83 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~ 83 (409)
..+|+|||+|++|+-+|..|++.| +|+++++.+. . +
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~--------~-------------~---------------------- 176 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV--------E-------------P---------------------- 176 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC--------C-------------C----------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC--------C-------------C----------------------
Confidence 358999999999999999999999 9999986542 0 0
Q ss_pred cccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCc
Q 015331 84 QPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVN 161 (409)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~ 161 (409)
...+.+.|.+. +++++. ++|.+++.++ .|.+.+|+++.+|.||.|.|..
T Consensus 177 -----------------------~~~~~~~l~~~--gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 177 -----------------------DADQHALLAAR--GVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp -----------------------CHHHHHHHHHT--TCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEE
T ss_pred -----------------------CHHHHHHHHHC--CcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcc
Confidence 01123334333 678874 8888886533 6888899999999999999964
No 269
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.61 E-value=0.00048 Score=66.95 Aligned_cols=97 Identities=16% Similarity=0.102 Sum_probs=66.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+++...... +.++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~-------------------~d~~-------------------- 251 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG-------------------FDQD-------------------- 251 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------SCHH--------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc-------------------CCHH--------------------
Confidence 4799999999999999999999999999997421000 0000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeC----CeEEEE--EcCCC---EEecCEEE
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESG----LFKLVN--LADGA---VFKTKVLI 155 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~----~~~~v~--~~~g~---~~~ad~vV 155 (409)
+ ...+.+.|.+. +++++.++++..++..+ +.+.+. ..++. ++.+|.||
T Consensus 252 --------------------~-~~~~~~~l~~~--GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi 308 (519)
T 3qfa_A 252 --------------------M-ANKIGEHMEEH--GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVM 308 (519)
T ss_dssp --------------------H-HHHHHHHHHHT--TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEE
T ss_pred --------------------H-HHHHHHHHHHC--CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEE
Confidence 0 12233444443 78999999988887543 344444 34552 46899999
Q ss_pred EcCCCchH
Q 015331 156 GCDGVNSV 163 (409)
Q Consensus 156 ~AdG~~s~ 163 (409)
.|.|....
T Consensus 309 ~a~G~~p~ 316 (519)
T 3qfa_A 309 LAIGRDAC 316 (519)
T ss_dssp ECSCEEES
T ss_pred EecCCccc
Confidence 99998654
No 270
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.60 E-value=0.00014 Score=69.38 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCc-eEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIR-SLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~-V~v~E~~~~ 38 (409)
..+|+|||||.+|+-+|..|++.|.+ |+|+++.+.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 35799999999999999999999999 999998764
No 271
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.59 E-value=2.9e-05 Score=77.47 Aligned_cols=36 Identities=33% Similarity=0.533 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC--------CceEEEeCCC-cc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLG--------IRSLVLESSE-SL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g--------~~V~v~E~~~-~~ 39 (409)
..+|+|||||++||++|+.|+++| ++|+|||+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999998 9999999988 65
No 272
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.53 E-value=6e-05 Score=73.13 Aligned_cols=35 Identities=23% Similarity=0.507 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++|++|||+|++|+.+|..|++.|.+|+|+|+..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 46899999999999999999999999999999875
No 273
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.52 E-value=0.00041 Score=67.06 Aligned_cols=50 Identities=26% Similarity=0.276 Sum_probs=36.2
Q ss_pred HHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCC----EEecCEEEEcCCCc
Q 015331 110 LMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGA----VFKTKVLIGCDGVN 161 (409)
Q Consensus 110 l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~----~~~ad~vV~AdG~~ 161 (409)
+.+.|.+. +++++.+++|++++.++....+...+|+ ++.+|+||-|.|..
T Consensus 278 ~~~~L~~~--GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 278 AQSHLENT--SIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHT--TCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHhc--ceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 44555544 8999999999998754433444556664 68999999999964
No 274
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.51 E-value=4.8e-05 Score=74.67 Aligned_cols=36 Identities=33% Similarity=0.404 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-CceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLG-IRSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g-~~V~v~E~~~~ 38 (409)
+.+|+||||||.||+.+|..|++.| .+|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4689999999999999999999987 79999999875
No 275
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.50 E-value=0.0014 Score=65.00 Aligned_cols=98 Identities=17% Similarity=0.167 Sum_probs=66.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||++|+-+|..|++.|.+|+|+++.. ..+. +.+++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l~~------------------~d~~~------------------- 328 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LLRG------------------FDQQM------------------- 328 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT------------------SCHHH-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-CcCc------------------CCHHH-------------------
Confidence 479999999999999999999999999999762 1100 00000
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEe------C---CeEEEE--EcCCCEEe--c
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEES------G---LFKLVN--LADGAVFK--T 151 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~------~---~~~~v~--~~~g~~~~--a 151 (409)
...+.+.|.+. +++++.++.+..+... + +.+.+. +.+|+++. +
T Consensus 329 ----------------------~~~~~~~l~~~--gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ 384 (598)
T 2x8g_A 329 ----------------------AEKVGDYMENH--GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEF 384 (598)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEE
T ss_pred ----------------------HHHHHHHHHhC--CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccC
Confidence 11233334333 7888899888887643 2 444443 45776555 9
Q ss_pred CEEEEcCCCchHh
Q 015331 152 KVLIGCDGVNSVV 164 (409)
Q Consensus 152 d~vV~AdG~~s~v 164 (409)
|.||.|.|.....
T Consensus 385 D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 385 ETVIFAVGREPQL 397 (598)
T ss_dssp SEEEECSCEEECG
T ss_pred CEEEEEeCCcccc
Confidence 9999999987543
No 276
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.49 E-value=0.00015 Score=70.97 Aligned_cols=35 Identities=14% Similarity=0.345 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||+|.+|+-+|..|++.+.+|+||+|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35899999999999999999999999999999986
No 277
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.48 E-value=0.00076 Score=65.56 Aligned_cols=91 Identities=16% Similarity=0.264 Sum_probs=66.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||||.+|+-+|..|++.|.+|+++++.+.+.. +
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---------------------~--------------------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---------------------D--------------------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---------------------C---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---------------------C---------------------
Confidence 5899999999999999999999999999997764210 0
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeE-EEEEcC---CC--EEecCEEEEcC
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFK-LVNLAD---GA--VFKTKVLIGCD 158 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~-~v~~~~---g~--~~~ad~vV~Ad 158 (409)
..+.+.|. ..++++++.++.++.+..+++++ .|.+.+ |+ ++.+|.||.|.
T Consensus 394 -----------------------~~l~~~l~-~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 449 (521)
T 1hyu_A 394 -----------------------QVLQDKVR-SLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQI 449 (521)
T ss_dssp -----------------------HHHHHHHT-TCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECC
T ss_pred -----------------------HHHHHHHh-cCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECc
Confidence 01222222 22478999999999998765544 355543 43 68899999999
Q ss_pred CCc
Q 015331 159 GVN 161 (409)
Q Consensus 159 G~~ 161 (409)
|..
T Consensus 450 G~~ 452 (521)
T 1hyu_A 450 GLL 452 (521)
T ss_dssp CEE
T ss_pred CCC
Confidence 954
No 278
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.48 E-value=0.00035 Score=66.93 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||||.+|+-+|..|++.|.+|+|+++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 35899999999999999999999999999998764
No 279
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.47 E-value=7.6e-05 Score=72.35 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++|++|||+|++|+.+|..|++.|.+|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 45899999999999999999999999999999876
No 280
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.42 E-value=0.0002 Score=72.23 Aligned_cols=96 Identities=9% Similarity=0.004 Sum_probs=68.9
Q ss_pred CcEEEEC--CCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccC
Q 015331 5 EDIVIVG--AGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVS 82 (409)
Q Consensus 5 ~dVvIIG--gG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~ 82 (409)
.+|+||| ||.+|+-+|..|++.|.+|+++++.+.+..... .
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~-------------------------------------~ 566 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN-------------------------------------N 566 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG-------------------------------------G
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc-------------------------------------c
Confidence 4699999 999999999999999999999997764211000 0
Q ss_pred CcccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE---cCCCEEecCEEEEcCC
Q 015331 83 CQPASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL---ADGAVFKTKVLIGCDG 159 (409)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~---~~g~~~~ad~vV~AdG 159 (409)
......+.+.|.+. +++++.+++|++++.+ .+.+.. .+++++.+|.||.|.|
T Consensus 567 ---------------------~~~~~~l~~~l~~~--GV~i~~~~~V~~i~~~--~~~v~~~~~~~~~~i~aD~VV~A~G 621 (690)
T 3k30_A 567 ---------------------TFEVNRIQRRLIEN--GVARVTDHAVVAVGAG--GVTVRDTYASIERELECDAVVMVTA 621 (690)
T ss_dssp ---------------------GTCHHHHHHHHHHT--TCEEEESEEEEEEETT--EEEEEETTTCCEEEEECSEEEEESC
T ss_pred ---------------------chhHHHHHHHHHHC--CCEEEcCcEEEEEECC--eEEEEEccCCeEEEEECCEEEECCC
Confidence 00123455555554 7999999999998743 444543 2445799999999999
Q ss_pred Cch
Q 015331 160 VNS 162 (409)
Q Consensus 160 ~~s 162 (409)
..+
T Consensus 622 ~~p 624 (690)
T 3k30_A 622 RLP 624 (690)
T ss_dssp EEE
T ss_pred CCC
Confidence 653
No 281
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.41 E-value=7.3e-05 Score=73.35 Aligned_cols=35 Identities=40% Similarity=0.603 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHR-LGIRSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~-~g~~V~v~E~~~ 37 (409)
+.||+||||||.||+.+|..|++ .+.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 35899999999999999999997 489999999987
No 282
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.39 E-value=0.00026 Score=69.73 Aligned_cols=56 Identities=20% Similarity=0.237 Sum_probs=44.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAV 59 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~ 59 (409)
.+|||+|||+|+.|..+|..|++.|.+|+++||++..+...+...+. ....++++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~-~l~~w~~~~ 62 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFS-GLLSWLKEY 62 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHH-HHHHHHHHT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHH-HHHHHHHHh
Confidence 46899999999999999999999999999999999876655544433 344444444
No 283
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.36 E-value=0.00013 Score=72.08 Aligned_cols=36 Identities=33% Similarity=0.504 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHR-LGIRSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~-~g~~V~v~E~~~~ 38 (409)
.++|++|||+|++|+.+|..|++ .|.+|+|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 35899999999999999999999 8999999999864
No 284
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.35 E-value=6.9e-05 Score=73.37 Aligned_cols=35 Identities=43% Similarity=0.509 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-cCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHR-LGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~-~g~~V~v~E~~~~ 38 (409)
.+|+||||||.||+.+|..|++ .|.+|+|+|+.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 5899999999999999999998 7999999999764
No 285
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.32 E-value=0.00012 Score=71.71 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRL-GIRSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~-g~~V~v~E~~~~ 38 (409)
..+|++|||+|++|+.+|..|++. |.+|+|+|+...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 358999999999999999999998 899999999854
No 286
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.03 E-value=0.0018 Score=67.76 Aligned_cols=89 Identities=19% Similarity=0.198 Sum_probs=66.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccCCcceeEEechhHHHHHHHcCCchHHHhhcccccCeEEEeccCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLRVTGFAITLWTNAWRALDAVGISDSLRQQHIQLQGMVVASSVSCQ 84 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (409)
.+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.+.. .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~----------------------~-------------------- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA----------------------A-------------------- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH----------------------H--------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch----------------------h--------------------
Confidence 5799999999999999999999999999998764210 0
Q ss_pred ccccccccccCCCCCccccccCHHHHHHHHHhhCCCCeEEeCceEEEEEEe-CCe-EEEEEcC-------C--CEEecCE
Q 015331 85 PASEISFKTKGNRGGHEVRSVKRSLLMEALERELPSGTIRYSSKVVSVEES-GLF-KLVNLAD-------G--AVFKTKV 153 (409)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~l~~~~~~~~i~~~~~v~~v~~~-~~~-~~v~~~~-------g--~~~~ad~ 153 (409)
.+.|.+. +++++.++.|++++.+ ++. ..|++.+ | .++.+|.
T Consensus 323 --------------------------~~~l~~~--GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~ 374 (965)
T 2gag_A 323 --------------------------AAQAVAD--GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADV 374 (965)
T ss_dssp --------------------------HHHHHHT--TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSE
T ss_pred --------------------------HHHHHhC--CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCE
Confidence 0122222 7899999999999873 332 2344443 4 5789999
Q ss_pred EEEcCCCchH
Q 015331 154 LIGCDGVNSV 163 (409)
Q Consensus 154 vV~AdG~~s~ 163 (409)
||.|.|....
T Consensus 375 Vv~a~G~~P~ 384 (965)
T 2gag_A 375 LAVAGGFNPV 384 (965)
T ss_dssp EEEECCEEEC
T ss_pred EEECCCcCcC
Confidence 9999997653
No 287
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.97 E-value=0.0013 Score=66.59 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=30.9
Q ss_pred CcEEEEC--CCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVG--AGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIG--gG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4899999 99999999999999999999999876
No 288
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.85 E-value=0.0014 Score=52.45 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35899999999999999999999999999998764
No 289
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.82 E-value=0.00092 Score=62.28 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=33.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 589999999999999999999999999999988653
No 290
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.82 E-value=0.0013 Score=51.66 Aligned_cols=35 Identities=20% Similarity=0.382 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 35799999999999999999999999999998753
No 291
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.81 E-value=0.006 Score=61.21 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=36.5
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCC--CEEecCEEEEcCCCch
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADG--AVFKTKVLIGCDGVNS 162 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g--~~~~ad~vV~AdG~~s 162 (409)
.+.+.|.+. +++++.+++|..++ +++++++ .+| .++.+|.||.|.|..+
T Consensus 578 ~~~~~l~~~--GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 578 IHRTTLLSR--GVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHT--TCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHhc--CCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 344555543 79999999999987 3455554 566 5799999999999764
No 292
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.78 E-value=0.0055 Score=58.35 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--------------------CC-ceEEEeCCCcc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--------------------GI-RSLVLESSESL 39 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--------------------g~-~V~v~E~~~~~ 39 (409)
.+|+|||+|.+|+-+|..|++. |. +|+|+++....
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 5799999999999999999874 54 89999988743
No 293
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.76 E-value=0.0016 Score=50.76 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999865
No 294
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.71 E-value=0.0037 Score=61.07 Aligned_cols=36 Identities=14% Similarity=0.395 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
..+|+|||+|.+|+-+|..|++.|.+|++++|.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 358999999999999999999999999999988753
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.65 E-value=0.0027 Score=50.57 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4589999999999999999999999999999874
No 296
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.64 E-value=0.002 Score=50.45 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+-.|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34799999999999999999999999999998864
No 297
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.59 E-value=0.024 Score=53.95 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHH--------------------HcCC-ceEEEeCCCcc
Q 015331 5 EDIVIVGAGIAGLTTSLALH--------------------RLGI-RSLVLESSESL 39 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~--------------------~~g~-~V~v~E~~~~~ 39 (409)
.+|+|||||.+|+-+|..|+ +.|. +|+|+++....
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 58999999999999999999 5687 79999988743
No 298
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.56 E-value=0.0026 Score=56.49 Aligned_cols=38 Identities=13% Similarity=0.282 Sum_probs=34.5
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++..+|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 66667899999999999999999999999999998764
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.54 E-value=0.0026 Score=47.89 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-CceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLG-IRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g-~~V~v~E~~~ 37 (409)
..+|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 358999999999999999999999 8999999875
No 300
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.49 E-value=0.0029 Score=57.12 Aligned_cols=38 Identities=18% Similarity=0.376 Sum_probs=35.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
|++..+|+|||+|-.|..+|..|++.|+ +|.++|+++.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 7777899999999999999999999998 9999998763
No 301
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.48 E-value=0.014 Score=61.48 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
.+|+|||||..|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999996 899999876
No 302
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.47 E-value=0.0028 Score=57.98 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|||||++|+-+|..|++.| +|+++.+.+
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 58999999999999999999998 799998874
No 303
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.34 E-value=0.0034 Score=56.47 Aligned_cols=35 Identities=11% Similarity=0.356 Sum_probs=32.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 58999999999999999999999999999988754
No 304
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.28 E-value=0.0038 Score=57.40 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=32.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|++.++|+|||+|..|...|..|++.|++|+++++++
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 6666899999999999999999999999999999865
No 305
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.21 E-value=0.0055 Score=47.84 Aligned_cols=33 Identities=27% Similarity=0.499 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999865
No 306
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.18 E-value=0.0058 Score=55.20 Aligned_cols=38 Identities=18% Similarity=0.390 Sum_probs=33.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
|+...+|+|||+|-.|..+|..|+..|+ +|.++|.+..
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 6667799999999999999999999998 9999998753
No 307
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.15 E-value=0.0051 Score=50.55 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHc-CCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL-GIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~-g~~V~v~E~~~~ 38 (409)
..|+|+|+|..|..+|..|.+. |++|+++|+++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 4799999999999999999999 999999998763
No 308
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.10 E-value=0.0042 Score=52.71 Aligned_cols=33 Identities=6% Similarity=0.223 Sum_probs=31.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|+|||+|..|..+|..|.++|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 799999999999999999999999999998764
No 309
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.02 E-value=0.0044 Score=55.37 Aligned_cols=38 Identities=13% Similarity=0.094 Sum_probs=32.8
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+++.+|.|||.|..|...|..|+++|++|+++|+++.
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 33456899999999999999999999999999998875
No 310
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.99 E-value=0.0056 Score=54.96 Aligned_cols=35 Identities=23% Similarity=0.550 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||||..|+-+|..|++.|.+|+|+++...
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 35899999999999999999999999999998664
No 311
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.88 E-value=0.0082 Score=54.27 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|+|||+|..|.+.|..|++.|.+|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 312
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.88 E-value=0.028 Score=54.03 Aligned_cols=38 Identities=42% Similarity=0.607 Sum_probs=34.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR 40 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~ 40 (409)
.++||+|||||++||++|+.|+++|++|+|+|+++.+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 46799999999999999999999999999999987653
No 313
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.85 E-value=0.0096 Score=53.30 Aligned_cols=34 Identities=15% Similarity=0.425 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999998764
No 314
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.82 E-value=0.017 Score=54.00 Aligned_cols=47 Identities=9% Similarity=0.047 Sum_probs=36.1
Q ss_pred HHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCch
Q 015331 110 LMEALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 110 l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s 162 (409)
+.+.|.+. +++++.+++|++++.++ |.+.+|+++.+|.||.|.|...
T Consensus 224 ~~~~l~~~--gV~~~~~~~v~~i~~~~----v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 224 VASIYNQL--GIKLVHNFKIKEIREHE----IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHH--TCEEECSCCEEEECSSE----EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHC--CCEEEcCCceEEECCCe----EEECCCCEEeeeEEEECCCCCc
Confidence 33444444 78999999999986532 7788999999999999999643
No 315
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.80 E-value=0.0077 Score=55.21 Aligned_cols=38 Identities=18% Similarity=0.236 Sum_probs=32.8
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++.++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 55567999999999999999999999999999998764
No 316
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.76 E-value=0.0074 Score=57.41 Aligned_cols=36 Identities=14% Similarity=0.302 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CC-ceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRL-GI-RSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~-g~-~V~v~E~~~~ 38 (409)
+.++|.|||+|..|+.+|..|+++ |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 456899999999999999999999 99 9999999876
No 317
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.75 E-value=0.011 Score=53.51 Aligned_cols=35 Identities=11% Similarity=0.282 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
+++|+|||||-.|.++|..|++.|+ +|.++|++..
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3689999999999999999999998 9999998764
No 318
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.69 E-value=0.0088 Score=53.65 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|||+|.-|...|..++++|++|+++|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4899999999999999999999999999998764
No 319
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.68 E-value=0.017 Score=54.56 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=35.5
Q ss_pred HHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcC--CCEEecCEEEEcCCCch
Q 015331 108 SLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLAD--GAVFKTKVLIGCDGVNS 162 (409)
Q Consensus 108 ~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~--g~~~~ad~vV~AdG~~s 162 (409)
..+.+.|.+. +++++++++|++++.+ .+++...+ +.++.+|.||.|.|...
T Consensus 204 ~~l~~~l~~~--GV~i~~~~~v~~v~~~--~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 204 RLVEDLFAER--NIDWIANVAVKAIEPD--KVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHT--TCEEECSCEEEEECSS--EEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHC--CCEEEeCCEEEEEeCC--eEEEEecCCCceEEeeeEEEECCCCcc
Confidence 3455555554 7999999999998643 34443211 56899999999999653
No 320
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.66 E-value=0.011 Score=56.15 Aligned_cols=34 Identities=26% Similarity=0.530 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|..|+.+|..|+++|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 6899999999999999999999999999998864
No 321
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.63 E-value=0.012 Score=53.56 Aligned_cols=35 Identities=34% Similarity=0.286 Sum_probs=31.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
|+ .++|+|||+|-.|.+.|..|++.|++|++++|.
T Consensus 1 M~-~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MS-LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -C-CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CC-CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 54 469999999999999999999999999999974
No 322
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.63 E-value=0.013 Score=49.25 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 36899999999999999999999999999998764
No 323
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.61 E-value=0.0099 Score=53.53 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998864
No 324
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.59 E-value=0.027 Score=53.25 Aligned_cols=49 Identities=20% Similarity=0.150 Sum_probs=34.3
Q ss_pred HHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEE--cC-----CCEEecCEEEEcCCCc
Q 015331 109 LLMEALERELPSGTIRYSSKVVSVEESGLFKLVNL--AD-----GAVFKTKVLIGCDGVN 161 (409)
Q Consensus 109 ~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~--~~-----g~~~~ad~vV~AdG~~ 161 (409)
.+.+.|.+. +++++.+++|++++. +.+++.. .+ +.++.+|++|.|.|..
T Consensus 213 ~~~~~l~~~--gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 213 ILTKGLKEE--GIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHT--TCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHC--CCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 345555544 789999999998864 4444443 23 4578999999998853
No 325
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.59 E-value=0.01 Score=53.46 Aligned_cols=33 Identities=36% Similarity=0.394 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|+|||+|-.|.+.|..|++.|.+|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999999864
No 326
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.56 E-value=0.0091 Score=53.38 Aligned_cols=38 Identities=24% Similarity=0.412 Sum_probs=32.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+++++|.|||+|-.|...|..|++.|++|+++++++.
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA 38 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 77778999999999999999999999999999998753
No 327
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.54 E-value=0.014 Score=51.84 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=31.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|..|.+.|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998764
No 328
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.50 E-value=0.015 Score=53.71 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||+|++|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998874
No 329
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.49 E-value=0.005 Score=58.61 Aligned_cols=60 Identities=17% Similarity=0.097 Sum_probs=43.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCccC----C--cceeEEechhHHHHHHHcCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESLR----V--TGFAITLWTNAWRALDAVGIS 62 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~~----~--~~~~~~~~~~~~~~l~~~gl~ 62 (409)
+.++|+|+|+|-.|..+|..|...|++|+|+|+++..- . ....+.=.....+.|++.|+.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCC
Confidence 45789999999999999999999999999999986421 1 111122223445677777654
No 330
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.48 E-value=0.013 Score=52.54 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999865
No 331
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.46 E-value=0.013 Score=52.23 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|+|||+|-.|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999874
No 332
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.46 E-value=0.012 Score=53.94 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|.|||+|--|.++|..|++.|++|+++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 333
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.45 E-value=0.017 Score=51.95 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998864
No 334
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.45 E-value=0.015 Score=49.22 Aligned_cols=33 Identities=15% Similarity=0.285 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
...|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 468999999999999999999999999999864
No 335
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.42 E-value=0.011 Score=55.87 Aligned_cols=35 Identities=23% Similarity=0.491 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||.|++|+++|..|+++|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 45899999999999999999999999999998764
No 336
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.39 E-value=0.017 Score=51.91 Aligned_cols=35 Identities=20% Similarity=0.497 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
+..+|+|||+|..|.++|+.|++.|+ +|+++|.++
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 35689999999999999999999999 999999873
No 337
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.38 E-value=0.016 Score=52.36 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
.++|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 999999865
No 338
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.38 E-value=0.015 Score=55.60 Aligned_cols=35 Identities=26% Similarity=0.532 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|+|||+|..|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 47999999999999999999999999999998753
No 339
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.36 E-value=0.013 Score=55.88 Aligned_cols=38 Identities=34% Similarity=0.443 Sum_probs=34.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~ 38 (409)
|++.++|.|||.|..|+.+|..|++. |++|+++|+++.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 65557999999999999999999999 899999998764
No 340
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.36 E-value=0.045 Score=52.65 Aligned_cols=58 Identities=24% Similarity=0.107 Sum_probs=44.2
Q ss_pred HHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcCCCEEecCEEEEcCCCchH--hHhHhCCC
Q 015331 112 EALERELPSGTIRYSSKVVSVEESGLFKLVNLADGAVFKTKVLIGCDGVNSV--VAKWLGFK 171 (409)
Q Consensus 112 ~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~g~~~~ad~vV~AdG~~s~--vr~~lg~~ 171 (409)
+.+.+. +++++.++.|.+++.++....|.+.+|.++.+|.||.|.|..+. +.+.+|..
T Consensus 265 ~~l~~~--GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERW--GIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHHHH--TCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhC--CcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCC
Confidence 444443 78999999999998765555677888889999999999998764 34555543
No 341
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.31 E-value=0.016 Score=55.03 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..+|.|||.|.+|+++|..|+++|++|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3589999999999999999999999999999865
No 342
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.30 E-value=0.017 Score=52.99 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998864
No 343
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.26 E-value=0.019 Score=51.68 Aligned_cols=34 Identities=15% Similarity=0.388 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+++|+|||+|-.|.++|+.|+..|. ++.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 5799999999999999999999987 899999875
No 344
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.24 E-value=0.019 Score=51.93 Aligned_cols=38 Identities=11% Similarity=0.177 Sum_probs=31.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcC----CceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLG----IRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g----~~V~v~E~~~~ 38 (409)
|++.++|.|||+|-.|.+.|..|.+.| ++|+++++++.
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 344578999999999999999999999 79999998763
No 345
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.23 E-value=0.0097 Score=50.55 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEE-EeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLV-LESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v-~E~~~~ 38 (409)
.++|.|||+|-.|.++|..|++.|++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 46899999999999999999999999999 887754
No 346
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.21 E-value=0.023 Score=51.15 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|.|||+|..|...|..|++.|++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 347
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.19 E-value=0.022 Score=51.52 Aligned_cols=34 Identities=29% Similarity=0.445 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
.+|+|||||-.|..+|..|++.|+ +|.++|.+..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 589999999999999999999998 9999998764
No 348
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.17 E-value=0.041 Score=53.00 Aligned_cols=34 Identities=15% Similarity=0.286 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~ 38 (409)
.+|+|||+|-+|.-++..|++. +.+|+++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 4799999999999999999875 679999988764
No 349
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.11 E-value=0.012 Score=51.36 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||||.+|+..|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999999999999999999999999998543
No 350
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.09 E-value=0.27 Score=49.11 Aligned_cols=51 Identities=16% Similarity=0.068 Sum_probs=41.0
Q ss_pred HHHHHHHHhhCCCCeEEeCceEEEEEEeCCeEEEEEcC------CCEEecCEEEEcCCCc
Q 015331 108 SLLMEALERELPSGTIRYSSKVVSVEESGLFKLVNLAD------GAVFKTKVLIGCDGVN 161 (409)
Q Consensus 108 ~~l~~~l~~~~~~~~i~~~~~v~~v~~~~~~~~v~~~~------g~~~~ad~vV~AdG~~ 161 (409)
..|.+.|.+ +..|++|++|+.|+.++++++|++.+ +.+++||.||.|....
T Consensus 401 ~~l~~~La~---~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~ 457 (662)
T 2z3y_A 401 SCVPVALAE---GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 457 (662)
T ss_dssp THHHHHHTT---TCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHH
T ss_pred HHHHHHHHh---cCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHH
Confidence 345556655 45899999999999999999998876 5679999999988743
No 351
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.09 E-value=0.022 Score=54.35 Aligned_cols=38 Identities=18% Similarity=0.340 Sum_probs=32.9
Q ss_pred CC-CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 ME-EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~-~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+ +..+|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 43 346899999999999999999999999999998764
No 352
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.06 E-value=0.017 Score=54.09 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|.|||+|..|+.+|..|++ |++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 4689999999999999999998 999999998864
No 353
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.97 E-value=0.045 Score=49.50 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHH-HHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLT-TSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~-~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||.|.+|++ +|..|+++|++|.+.|+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 57999999999996 89999999999999998764
No 354
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.97 E-value=0.028 Score=50.68 Aligned_cols=37 Identities=27% Similarity=0.548 Sum_probs=31.8
Q ss_pred CC-CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 1 ME-EDEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 1 M~-~~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
|+ +..+|+|||+|..|.++|..|+..|+ ++.++|.+.
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 54 35799999999999999999999987 899999754
No 355
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.95 E-value=0.026 Score=50.53 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998763
No 356
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.95 E-value=0.021 Score=50.60 Aligned_cols=34 Identities=21% Similarity=0.399 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+.+|.|||+|.-|...|..|+ +|++|+++|+++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 568999999999999999999 9999999998764
No 357
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.93 E-value=0.023 Score=53.15 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++..|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345799999999999999999999999999999874
No 358
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.93 E-value=0.026 Score=52.94 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||.|..||.+|..|+++|++|+.+|-++.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 35899999999999999999999999999998764
No 359
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.89 E-value=0.026 Score=50.48 Aligned_cols=32 Identities=28% Similarity=0.496 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+|+|||+|-.|.++|..|+..|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 999999875
No 360
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.89 E-value=0.031 Score=50.30 Aligned_cols=35 Identities=17% Similarity=0.324 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|..|.++|..|+..|+ +|.++|.+..
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 5689999999999999999999998 9999998764
No 361
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.85 E-value=0.093 Score=46.70 Aligned_cols=33 Identities=6% Similarity=0.142 Sum_probs=26.1
Q ss_pred CcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGI-AGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~-aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+++|||||. +++.+|..+++.|.+|+++++.+
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 4678888875 56788888888899999987654
No 362
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.84 E-value=0.028 Score=49.79 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998864
No 363
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.82 E-value=0.025 Score=50.60 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999998763
No 364
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.82 E-value=0.03 Score=52.82 Aligned_cols=35 Identities=17% Similarity=0.449 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||.|..|+.+|..|+++|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999999875
No 365
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.81 E-value=0.028 Score=50.41 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|+|||+|-.|.+.|..|+ .|.+|++++|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 68999999999999999999 999999999875
No 366
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.80 E-value=0.023 Score=48.19 Aligned_cols=38 Identities=24% Similarity=0.323 Sum_probs=32.8
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++.++|+|.|| |..|..++..|.++|++|.++.|++.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 666678999996 99999999999999999999999864
No 367
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=94.79 E-value=0.028 Score=50.55 Aligned_cols=37 Identities=24% Similarity=0.546 Sum_probs=32.8
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
|+++.+|+|||+|-.|.++|+.|+..+. ++.++|.+.
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 6667899999999999999999999886 799999754
No 368
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.78 E-value=0.033 Score=48.04 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||+|-.|.++|..|++.|++|+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 46899999999999999999999999999998764
No 369
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.72 E-value=0.032 Score=50.16 Aligned_cols=35 Identities=17% Similarity=0.455 Sum_probs=30.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
++++|+|||+|-.|.++|..|+..|. ++.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45799999999999999999999885 799999764
No 370
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.67 E-value=0.04 Score=49.54 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|||+|..|.++|..|+..|+ ++.++|.++.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 4689999999999999999999988 9999998764
No 371
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.64 E-value=0.031 Score=52.76 Aligned_cols=34 Identities=21% Similarity=0.500 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999998875
No 372
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.63 E-value=0.026 Score=53.34 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|+|||+|..|+.+|..|++.|++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 799999999999999999999999999998753
No 373
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.63 E-value=0.033 Score=48.22 Aligned_cols=33 Identities=27% Similarity=0.382 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
.+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999998 899999875
No 374
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.62 E-value=0.028 Score=50.63 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=29.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..+|+|||+|-.|.+.|..|++.|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 654
No 375
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.61 E-value=0.036 Score=49.69 Aligned_cols=33 Identities=30% Similarity=0.473 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRL--GIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~ 38 (409)
+|+|||+|-.|.++|..|++. |.+|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 799999999999999999985 789999998763
No 376
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.61 E-value=0.025 Score=50.79 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHc-----C-CceEEEeC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL-----G-IRSLVLES 35 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~-----g-~~V~v~E~ 35 (409)
++|.|||+|..|.+.|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999987
No 377
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.58 E-value=0.035 Score=50.41 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+++|.|||+|--|.+.|..|++.|++|++++|++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4799999999999999999999999999999864
No 378
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.58 E-value=0.017 Score=53.27 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999865
No 379
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.57 E-value=0.04 Score=49.35 Aligned_cols=33 Identities=33% Similarity=0.457 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
++|+|||+|-.|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 999999865
No 380
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.56 E-value=0.039 Score=48.04 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC----CceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLG----IRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g----~~V~v~E~~~~ 38 (409)
.++|.|||+|-.|.+.|..|++.| ++|.++++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 468999999999999999999999 69999998765
No 381
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.53 E-value=0.014 Score=45.79 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||+|..|..+|..|++.|.+|++++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 35899999999999999999999999999998753
No 382
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.51 E-value=0.038 Score=51.48 Aligned_cols=35 Identities=26% Similarity=0.473 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45899999999999999999999999999998763
No 383
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.50 E-value=0.036 Score=52.71 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999998764
No 384
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.50 E-value=0.031 Score=49.50 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=31.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 799999999999999999999999999998864
No 385
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.39 E-value=0.027 Score=50.71 Aligned_cols=35 Identities=17% Similarity=0.103 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-CceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLG-IRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g-~~V~v~E~~~~ 38 (409)
.++|.|||.|..|..+|..|++.| ++|+++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 358999999999999999999999 99999998763
No 386
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.38 E-value=0.032 Score=50.32 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 5899999999999999999999999999998764
No 387
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.37 E-value=0.044 Score=50.14 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
.+.+|+|+|||-||..+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35699999999999999999999999 999999874
No 388
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.37 E-value=0.049 Score=45.95 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|-.|...|..|++.|++|.+++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNPK 62 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998753
No 389
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.36 E-value=0.046 Score=50.68 Aligned_cols=35 Identities=23% Similarity=0.475 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|+|+|.+|+.+|..++..|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45899999999999999999999999999998763
No 390
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.31 E-value=0.057 Score=44.74 Aligned_cols=37 Identities=38% Similarity=0.434 Sum_probs=33.0
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+. +.|+|+|| |-.|..++..|.++|++|.++.|++.
T Consensus 1 M~~-~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 1 MAV-KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CCC-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 543 68999999 99999999999999999999998764
No 391
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.30 E-value=0.038 Score=50.03 Aligned_cols=30 Identities=27% Similarity=0.325 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLES 35 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~ 35 (409)
+|.|||+|..|.+.|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 392
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.26 E-value=0.049 Score=49.97 Aligned_cols=33 Identities=21% Similarity=0.430 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999875
No 393
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.23 E-value=0.039 Score=49.22 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|..|...|..|++.|++|+++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 5899999999999999999999999999998753
No 394
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.20 E-value=0.014 Score=49.58 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLES 35 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~ 35 (409)
.++|.|||.|..|.++|..|+++|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 46899999999999999999999999999987
No 395
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.14 E-value=0.045 Score=49.15 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
.++|.|||.|..|...|..|++.|+ +|+++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 4689999999999999999999999 999999864
No 396
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.11 E-value=0.057 Score=49.55 Aligned_cols=34 Identities=15% Similarity=0.477 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|+|||..|..+|+.+++.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3799999999999999999999999999998765
No 397
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.10 E-value=0.05 Score=49.36 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|.|||.|..|.+.|..|++.|++|.++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999875
No 398
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.07 E-value=0.05 Score=48.86 Aligned_cols=34 Identities=24% Similarity=0.445 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~~ 38 (409)
.+|.|||.|..|.+.|..|++.|+ +|.++|+++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 589999999999999999999999 9999998763
No 399
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.06 E-value=0.049 Score=48.28 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGI--RSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~~ 38 (409)
+|+|||+|..|.++|..|++.|+ +|.++|+++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~ 36 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence 79999999999999999999998 8999998763
No 400
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.06 E-value=0.066 Score=47.20 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC---ceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI---RSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~---~V~v~E~~~~ 38 (409)
+++|.|||+|--|.+.|..|.++|+ +|.++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 4689999999999999999999998 9999998764
No 401
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.99 E-value=0.021 Score=48.94 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+..|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4579999999999999999999999 999998764
No 402
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.98 E-value=0.051 Score=48.95 Aligned_cols=32 Identities=31% Similarity=0.491 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+|+|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 79999999999999999999999 999999865
No 403
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.95 E-value=0.06 Score=49.18 Aligned_cols=35 Identities=26% Similarity=0.455 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
++.+|+|+|||-+|..+|..|...|. +|+++|++.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35799999999999999999999998 799999873
No 404
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.91 E-value=0.063 Score=49.41 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3589999999999999999999999999999765
No 405
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.91 E-value=0.074 Score=46.85 Aligned_cols=37 Identities=30% Similarity=0.313 Sum_probs=32.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|+ .++|+|.|+|..|..++..|.++|++|+++.|+..
T Consensus 1 M~-~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 1 MS-LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp -C-CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CC-CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 54 45899999999999999999999999999998764
No 406
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.88 E-value=0.05 Score=48.42 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|..|...|..|++.|++|.++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998753
No 407
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.87 E-value=0.041 Score=51.30 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|..|+.+|..|++ |++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~ 33 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPS 33 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHH
Confidence 69999999999999999999 999999998753
No 408
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.84 E-value=0.053 Score=51.80 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+.+|.|||+|.-|..+|..|+++|++|.+++|++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 56899999999999999999999999999998754
No 409
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.84 E-value=0.062 Score=47.24 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|.|||+|..|.+.|..|.+.|++|.++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998765
No 410
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.83 E-value=0.07 Score=47.15 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=30.8
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|.|||+ |-.|...|..|++.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 48999999 9999999999999999999999765
No 411
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.83 E-value=0.061 Score=45.10 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=30.0
Q ss_pred cEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 6 DIVIVG-AGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 6 dVvIIG-gG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|+||| +|-.|...|..|++.|++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999865
No 412
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.82 E-value=0.062 Score=48.10 Aligned_cols=34 Identities=18% Similarity=0.427 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~~ 38 (409)
++|+|||+|..|.++|+.|++.|+ ++.++|..+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 379999999999999999999987 8999998763
No 413
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.80 E-value=0.038 Score=50.59 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-------CceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLG-------IRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g-------~~V~v~E~~~~ 38 (409)
.++|.|||+|..|.+.|..|++.| ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999999 89999998765
No 414
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=93.75 E-value=0.062 Score=46.90 Aligned_cols=34 Identities=38% Similarity=0.503 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCc-eEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIR-SLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~-V~v~E~~~ 37 (409)
.++|.|||+|-.|...|..|++.|++ |.++++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 36899999999999999999999998 89999765
No 415
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=93.74 E-value=0.043 Score=49.62 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=32.8
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHcCC-------ceEEEeCCC
Q 015331 1 MEEDEDIVIVGA-GIAGLTTSLALHRLGI-------RSLVLESSE 37 (409)
Q Consensus 1 M~~~~dVvIIGg-G~aGl~~A~~L~~~g~-------~V~v~E~~~ 37 (409)
|+++++|+|+|| |..|..++..|.+.|+ +|.++|+.+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 777789999998 9999999999999886 899999753
No 416
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.72 E-value=0.064 Score=47.78 Aligned_cols=34 Identities=29% Similarity=0.305 Sum_probs=31.1
Q ss_pred CcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVG-AGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIG-gG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.||| +|..|.++|..|++.|++|.++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3799999 999999999999999999999997653
No 417
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=93.71 E-value=0.074 Score=49.64 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=32.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 1 MEEDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 1 M~~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
|++..+|+|+|||..|..++..+.+.|++|.+++ .+
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 5556799999999999999999999999999999 54
No 418
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.66 E-value=0.072 Score=45.96 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC----ceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI----RSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~----~V~v~E~~~~ 38 (409)
++|.|||+|-.|.+.|..|.++|+ +|.++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 589999999999999999999998 9999998753
No 419
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.64 E-value=0.066 Score=46.60 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcC-CceEEEeCCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLG-IRSLVLESSE 37 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g-~~V~v~E~~~ 37 (409)
+|.|||+|-.|...|..|++.| ++|.++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999765
No 420
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.63 E-value=0.077 Score=47.67 Aligned_cols=34 Identities=29% Similarity=0.617 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
..+|+|||+|..|.++|+.|+..|. +|.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998885 799999865
No 421
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.62 E-value=0.075 Score=50.61 Aligned_cols=36 Identities=19% Similarity=0.367 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+++|.|||.|.-|..+|..|+++|++|+++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998864
No 422
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.59 E-value=0.075 Score=50.70 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+.+|.|||+|..|...|..|+++|++|.++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~ 39 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTS 39 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998753
No 423
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.56 E-value=0.079 Score=47.64 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
..+|+|||+|..|.++|+.|+..|. ++.++|.+.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 4689999999999999999999987 899999754
No 424
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.56 E-value=0.046 Score=48.64 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=27.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.+||-|.-|...|..|.++|++|+++|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3799999999999999999999999999998775
No 425
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.55 E-value=0.08 Score=48.87 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||+|..|+.+|..++..|.+|+++|+++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4589999999999999999999999999999765
No 426
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.49 E-value=0.061 Score=51.42 Aligned_cols=34 Identities=26% Similarity=0.359 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~~ 38 (409)
++|.|||.|..|+.+|..|+++ |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5899999999999999999998 799999998764
No 427
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.48 E-value=0.068 Score=47.43 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|..|...|..|++.|++|.++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999999999999999999999999998764
No 428
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.43 E-value=0.063 Score=49.54 Aligned_cols=34 Identities=18% Similarity=0.046 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-------CceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLG-------IRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g-------~~V~v~E~~~~ 38 (409)
++|.|||+|-.|.+.|..|++.| ++|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998764
No 429
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.40 E-value=0.072 Score=47.70 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLG--IRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g--~~V~v~E~~~ 37 (409)
++|+|||+|-.|.++|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 37999999999999999999999 6899999865
No 430
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.39 E-value=0.075 Score=46.90 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999997 799999765
No 431
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.36 E-value=0.075 Score=46.74 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|+|.|||..|..++..|.++|++|+++.|++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 5899999999999999999999999999998763
No 432
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.36 E-value=0.092 Score=47.20 Aligned_cols=34 Identities=15% Similarity=0.348 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
..+|+|||+|..|.++|+.|+..|+ +|.++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 3689999999999999999999997 899999754
No 433
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.34 E-value=0.093 Score=45.98 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|+|+|-+|.++|..|++.|.+|+|++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999998764
No 434
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.29 E-value=0.1 Score=43.79 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=30.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 6 DIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 6999996 99999999999999999999998763
No 435
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.28 E-value=0.086 Score=50.41 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|..|..+|..|+++|++|.++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5899999999999999999999999999998764
No 436
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.26 E-value=0.087 Score=49.81 Aligned_cols=34 Identities=29% Similarity=0.372 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4579999999999999999999999999999765
No 437
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.26 E-value=0.084 Score=50.55 Aligned_cols=36 Identities=31% Similarity=0.600 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 358999999999999999999999999999998754
No 438
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.23 E-value=0.095 Score=50.21 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|.|||.|.-|..+|..|+++|++|+++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998864
No 439
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.23 E-value=0.11 Score=45.36 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|+|||+|-+|.++|..|++.|.+|+|+.|...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 440
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.21 E-value=0.093 Score=46.18 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
+|.|||+|..|.+.|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 79999999999999999999998 899998765
No 441
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.19 E-value=0.083 Score=50.10 Aligned_cols=34 Identities=29% Similarity=0.271 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||||.+|...+..|.+.|.+|+|++...
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4689999999999999999999999999999753
No 442
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.17 E-value=0.091 Score=46.81 Aligned_cols=34 Identities=38% Similarity=0.653 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~~ 38 (409)
.+|+|||||-.|..+|+.|+.+|+ +|.|+|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 589999999999999999999998 9999998764
No 443
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.17 E-value=0.12 Score=46.79 Aligned_cols=38 Identities=21% Similarity=0.380 Sum_probs=33.7
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++.+.|+|.|| |-.|..++..|.++|++|+++++...
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 666678999996 99999999999999999999998764
No 444
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.15 E-value=0.09 Score=49.92 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
.+|+|||||.+|+-+|..+.+.|. +|+++++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 479999999999999999999998 5999998764
No 445
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.96 E-value=0.12 Score=46.92 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 579999999999999999999999999999875
No 446
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=92.89 E-value=0.11 Score=48.22 Aligned_cols=34 Identities=26% Similarity=0.359 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||.|..|..+|..|+..|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4589999999999999999999999999999875
No 447
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=92.89 E-value=0.12 Score=45.78 Aligned_cols=34 Identities=15% Similarity=0.277 Sum_probs=31.2
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 37999999 99999999999999999999988764
No 448
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.88 E-value=0.12 Score=44.02 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=32.0
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+.|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 468999998 99999999999999999999998764
No 449
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.85 E-value=0.12 Score=46.60 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4689999999999999999999998 789999765
No 450
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.84 E-value=0.12 Score=43.44 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=30.0
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 6 DIVIVGA-GIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 6 dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|+|.|| |-.|..++..|.++|++|.++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999875
No 451
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.83 E-value=0.11 Score=49.57 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|||+|..|..+|..|+..|.+|+++|+++.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45899999999999999999999999999998753
No 452
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.82 E-value=0.11 Score=46.20 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
..+|+|||+|.+|.++|..|++.|. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899998775
No 453
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.80 E-value=0.086 Score=46.53 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
+|.|||+|..|...|..|++ |++|+++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 79999999999999999999 999999998753
No 454
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.78 E-value=0.1 Score=49.75 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
++|.|||+|..|..+|..|+++|++|+++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999865
No 455
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.76 E-value=0.13 Score=46.00 Aligned_cols=35 Identities=29% Similarity=0.339 Sum_probs=32.3
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|.|| |..|..++..|.++|++|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 468999999 99999999999999999999998765
No 456
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.75 E-value=0.15 Score=47.11 Aligned_cols=35 Identities=29% Similarity=0.516 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|||+|..|..++..+++.|++|.++|..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 45899999999999999999999999999997654
No 457
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.74 E-value=0.091 Score=45.61 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.++|.|||+|-.|...|..|.+.|.+|.++++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 3589999999999999999999999999999765
No 458
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.73 E-value=0.14 Score=46.17 Aligned_cols=34 Identities=18% Similarity=0.434 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
..+|+|||+|-.|.++|+.|+.+|. ++.++|.+.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 4689999999999999999999987 899999764
No 459
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.72 E-value=0.12 Score=45.99 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=32.9
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++...|+|+|| |-.|..++..|.+.|++|.++.|+..
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 39 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST 39 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 654568999998 99999999999999999999998753
No 460
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.70 E-value=0.13 Score=45.73 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..+|+|||+|..|..+|..|...|.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4589999999999999999999999999999875
No 461
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=92.70 E-value=0.13 Score=45.55 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|.|||+|..|..+|..|+..|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4589999999999999999999999999999875
No 462
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.63 E-value=0.064 Score=50.08 Aligned_cols=31 Identities=23% Similarity=0.201 Sum_probs=28.5
Q ss_pred CcEEEECCCHHHHHHHHHHHH-cCCceEEEeC
Q 015331 5 EDIVIVGAGIAGLTTSLALHR-LGIRSLVLES 35 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~-~g~~V~v~E~ 35 (409)
++|+|||+|..|.++|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 489999999999999999998 5999999983
No 463
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.61 E-value=0.07 Score=47.32 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
++|.|||+|-.|...|..|++.|++|++++ ++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGP 36 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHH
Confidence 589999999999999999999999999998 543
No 464
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.61 E-value=0.15 Score=47.17 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
...|+|||+|..|..+|..+++.|++|.++|..+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 35899999999999999999999999999997653
No 465
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=92.61 E-value=0.14 Score=46.32 Aligned_cols=35 Identities=20% Similarity=0.367 Sum_probs=30.7
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 3 EDEDIVIVGA-GIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGg-G~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
...+|+|||+ |-.|.++|+.|...|. +|.++|.+.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 3568999998 9999999999999985 899999754
No 466
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.58 E-value=0.11 Score=44.82 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999998 789999765
No 467
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.54 E-value=0.088 Score=53.00 Aligned_cols=34 Identities=24% Similarity=0.372 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4799999999999999999999999999998864
No 468
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.53 E-value=0.13 Score=45.90 Aligned_cols=38 Identities=32% Similarity=0.405 Sum_probs=32.9
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 1 MEEDEDIVIVGA-GIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGg-G~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
|++...|+|+|| |-.|..++..|.++|++|.++.|++.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV 39 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCc
Confidence 655568999997 99999999999999999999998753
No 469
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.53 E-value=0.12 Score=45.33 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
.+|+|||+|-+|.+.|..|.+.|.+|++++|+.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999999875
No 470
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.52 E-value=0.11 Score=45.58 Aligned_cols=35 Identities=29% Similarity=0.233 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
..+|+|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 3579999999999999999999998 8999998864
No 471
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.52 E-value=0.08 Score=47.88 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=30.2
Q ss_pred CCC-CCcEEEECC-CHHHHHHHHHHHHcCC-------ceEEEeCC
Q 015331 1 MEE-DEDIVIVGA-GIAGLTTSLALHRLGI-------RSLVLESS 36 (409)
Q Consensus 1 M~~-~~dVvIIGg-G~aGl~~A~~L~~~g~-------~V~v~E~~ 36 (409)
|++ +++|+|+|| |-.|.+++..|...|+ +|.++|..
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 543 579999998 9999999999999885 79999976
No 472
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.48 E-value=0.14 Score=46.12 Aligned_cols=35 Identities=20% Similarity=0.415 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
++.+|+|||+|-.|.++|+.|+..+. ++.++|.+.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 45799999999999999999998886 799999754
No 473
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.41 E-value=0.11 Score=45.58 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|+|+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999999875
No 474
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.33 E-value=0.15 Score=45.08 Aligned_cols=38 Identities=21% Similarity=0.344 Sum_probs=32.3
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHcC-CceEEEeCCCc
Q 015331 1 MEEDEDIVIVGA-GIAGLTTSLALHRLG-IRSLVLESSES 38 (409)
Q Consensus 1 M~~~~dVvIIGg-G~aGl~~A~~L~~~g-~~V~v~E~~~~ 38 (409)
|+++..|+|.|| |-.|..++..|.+.| ++|.++.|++.
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~ 41 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR 41 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC
Confidence 554568999999 999999999999998 99999998764
No 475
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.23 E-value=0.12 Score=45.00 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLES 35 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~ 35 (409)
+|.|||+|-.|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999866
No 476
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.21 E-value=0.14 Score=45.33 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRL--GIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~--g~~V~v~E~~~ 37 (409)
.++|.|||+|-.|.+.|..|++. |.+|.++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 35899999999999999999988 67899998764
No 477
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.21 E-value=0.098 Score=49.00 Aligned_cols=34 Identities=26% Similarity=0.536 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+.-|||.|..|+.+|..|+++|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4788999999999999999999999999999874
No 478
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.19 E-value=0.15 Score=46.56 Aligned_cols=34 Identities=26% Similarity=0.522 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4689999999999999999999998 799999765
No 479
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.03 E-value=0.2 Score=43.32 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCCc
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGI-RSLVLESSES 38 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~~ 38 (409)
+|+|||+|-+|-+++..|.+.|. +|+|++|...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 79999999999999999999998 8999998753
No 480
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.03 E-value=0.15 Score=49.79 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=32.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
..|+|||+|..|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 57999999999999999999999999999998764
No 481
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=91.96 E-value=0.16 Score=45.28 Aligned_cols=32 Identities=31% Similarity=0.488 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
+|+|||+|-.|.++|+.|+..|+ ++.++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999888 699999875
No 482
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.87 E-value=0.11 Score=52.35 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4799999999999999999999999999998864
No 483
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=91.77 E-value=0.2 Score=46.15 Aligned_cols=37 Identities=16% Similarity=0.123 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCcc
Q 015331 3 EDEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSESL 39 (409)
Q Consensus 3 ~~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~~ 39 (409)
....++|+|||..|.++|..++..|++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 3568999999999999999999999999999987653
No 484
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.73 E-value=0.21 Score=44.66 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...++|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3579999999999999999999998 899999873
No 485
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=91.70 E-value=0.21 Score=43.98 Aligned_cols=34 Identities=29% Similarity=0.373 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...|+|+|+|-+|.+++..|++.|. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4589999999999999999999998 699998875
No 486
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=91.68 E-value=0.19 Score=46.76 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 4689999999999999999999999999999865
No 487
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=91.53 E-value=0.15 Score=45.62 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=29.3
Q ss_pred cEEEECC-CHHHHHHHHHHHHcC--CceEEEeCCC
Q 015331 6 DIVIVGA-GIAGLTTSLALHRLG--IRSLVLESSE 37 (409)
Q Consensus 6 dVvIIGg-G~aGl~~A~~L~~~g--~~V~v~E~~~ 37 (409)
+|+|||| |-.|.++|..|++.| .++.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 999999999999988 5899999875
No 488
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.45 E-value=0.19 Score=44.38 Aligned_cols=33 Identities=21% Similarity=0.181 Sum_probs=29.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--ceEEEeCCC
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGI--RSLVLESSE 37 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~--~V~v~E~~~ 37 (409)
++|.|||+|-.|.++|+.|..++. ++.|+|...
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 379999999999999999998875 799999764
No 489
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.39 E-value=0.24 Score=44.81 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 5 EDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 5 ~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.+|.|||.|-.|..+|..|+..|.+|++++++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 5799999999999999999999999999998764
No 490
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=91.37 E-value=0.25 Score=43.22 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4579999999999999999999996 899998765
No 491
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=91.34 E-value=0.26 Score=46.18 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
..+|+|+|||..|..++..+++.|++|.++|.++.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 45899999999999999999999999999997653
No 492
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=90.64 E-value=0.037 Score=46.11 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCc
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~~ 38 (409)
.++|.|||+|-.|.+.|..|.+.|++|.+++|++.
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 35799999999999999999999999999988754
No 493
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.29 E-value=0.22 Score=43.30 Aligned_cols=32 Identities=28% Similarity=0.475 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 6 DIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 6 dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
+|+|||+|-.|.+.|..|.+.|.+|++++|+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999765
No 494
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=91.28 E-value=0.21 Score=46.52 Aligned_cols=34 Identities=32% Similarity=0.490 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...|+|||+|..|.++|..|+..|. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899998764
No 495
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.17 E-value=0.22 Score=43.73 Aligned_cols=34 Identities=18% Similarity=0.102 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
..+++|+|+|-+|-+++..|++.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4589999999999999999999998 899998775
No 496
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=91.15 E-value=0.24 Score=43.55 Aligned_cols=34 Identities=21% Similarity=0.123 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGI-RSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~-~V~v~E~~~ 37 (409)
...|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 4579999999999999999999996 899998865
No 497
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.14 E-value=0.15 Score=45.90 Aligned_cols=35 Identities=14% Similarity=0.157 Sum_probs=30.6
Q ss_pred CCcEEEEC-CCHHHHHHHHHHHHcC--CceEEEeCCCc
Q 015331 4 DEDIVIVG-AGIAGLTTSLALHRLG--IRSLVLESSES 38 (409)
Q Consensus 4 ~~dVvIIG-gG~aGl~~A~~L~~~g--~~V~v~E~~~~ 38 (409)
+++|+||| +|..|.+++..|+..| .+|.++|.+..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~ 45 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA 45 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence 46899999 7999999999999988 68999997653
No 498
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=91.10 E-value=0.25 Score=45.10 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESS 36 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~ 36 (409)
...|+|+|.|-.|..+|..|.+.|.+|++.|++
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 357999999999999999999999999999854
No 499
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=91.06 E-value=0.24 Score=46.18 Aligned_cols=34 Identities=26% Similarity=0.296 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAGIAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
...|+|||.|..|..+|..|+..|.+|+++|+++
T Consensus 247 GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4589999999999999999999999999999865
No 500
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.89 E-value=0.21 Score=44.58 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=30.4
Q ss_pred CCcEEEECCC-HHHHHHHHHHHHcCCceEEEeCCC
Q 015331 4 DEDIVIVGAG-IAGLTTSLALHRLGIRSLVLESSE 37 (409)
Q Consensus 4 ~~dVvIIGgG-~aGl~~A~~L~~~g~~V~v~E~~~ 37 (409)
..+|+|||+| .+|..+|..|.+.|.+|++.+|+.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 3589999999 679999999999999999998764
Done!