BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015333
(409 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5LMQ0|RL1_RUEPO 50S ribosomal protein L1 OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=rplA PE=3 SV=1
Length = 232
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 183 LDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAE 242
L + A+ +K+ A A FDETVE + L + PR + +VRG + LP+G K VRVA FA
Sbjct: 21 LSVEQAVALIKSAASAKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFAR 80
Query: 243 GADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPN 302
G AEEA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL LMPN
Sbjct: 81 GPKAEEAQAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPVVGRLGKILGPRNLMPN 139
Query: 303 PKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLA 362
PK GTVT DVA+AVQ AK G ++FK++ +HAG+GKVS E L ENV AFV+A+ A
Sbjct: 140 PKVGTVTMDVAQAVQNAKGGEVQFKVEKAGVIHAGVGKVSFDEAKLVENVRAFVDAVAKA 199
Query: 363 KPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
KPAG K T Y+ + STMGP V + S S
Sbjct: 200 KPAGAKGT-----YLKKIALSSTMGPGVSVDVASAS 230
>sp|B9JDR8|RL1_AGRRK 50S ribosomal protein L1 OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=rplA PE=3 SV=1
Length = 232
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 137/214 (64%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L AI VK A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA GA
Sbjct: 21 LTQAIGMVKERAIAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGA 80
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGADIVG EL+E I GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 81 KADEAKAAGADIVGAEELVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DV AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++ AKP
Sbjct: 140 VGTVTMDVKGAVEASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKP 199
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
AG K YV + STMGP + + S++
Sbjct: 200 AGAKGN-----YVKRVAISSTMGPGVKIELASVT 228
>sp|A4WVL9|RL1_RHOS5 50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=rplA PE=3 SV=1
Length = 232
Score = 191 bits (486), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 139/218 (63%), Gaps = 6/218 (2%)
Query: 179 SRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVA 238
+ ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VRVA
Sbjct: 17 GKDMVSVEDAVALIKGAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVA 76
Query: 239 FFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHG 298
FA GA A+EA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL
Sbjct: 77 VFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRN 135
Query: 299 LMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNA 358
LMPNPK GTVT DVA AV AK G ++FK++ +HAG+GK+S E L +NV AFV+A
Sbjct: 136 LMPNPKVGTVTMDVAGAVGNAKGGEVQFKVEKAGVIHAGVGKISFDAEKLAQNVRAFVDA 195
Query: 359 LLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQS 396
+ AKPAG K T Y+ + STMGP V + S
Sbjct: 196 VNRAKPAGAKGT-----YLKKVSLSSTMGPGVSVDLAS 228
>sp|B3PW56|RL1_RHIE6 50S ribosomal protein L1 OS=Rhizobium etli (strain CIAT 652)
GN=rplA PE=3 SV=1
Length = 233
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 138/216 (63%), Gaps = 6/216 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA GA
Sbjct: 21 LTQAIGMVKERAVAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGA 80
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E I GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 81 KADEAKAAGADVVGAEDLVE-IVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++ AKP
Sbjct: 140 VGTVTMDVAGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKP 199
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRA 400
AG K YV + STMGP + + S++ A
Sbjct: 200 AGAKGN-----YVKRVAISSTMGPGVKIEVGSVTAA 230
>sp|A6U848|RL1_SINMW 50S ribosomal protein L1 OS=Sinorhizobium medicae (strain WSM419)
GN=rplA PE=3 SV=1
Length = 232
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 138/216 (63%), Gaps = 6/216 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+ +K A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA GA
Sbjct: 23 LTEAVTMIKERATAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGA 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG EL+E I GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 83 KADEAKAAGADVVGAEELVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++ AKP
Sbjct: 142 VGTVTMDVAGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRA 400
G K YV + STMGP + ++S A
Sbjct: 202 TGAKGN-----YVKRVAVSSTMGPGLKIDPATISAA 232
>sp|Q2K9M7|RL1_RHIEC 50S ribosomal protein L1 OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=rplA PE=3 SV=1
Length = 233
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 138/216 (63%), Gaps = 6/216 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA GA
Sbjct: 21 LTTAIGMVKERAVAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGA 80
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E I GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 81 KADEAKAAGADVVGAEDLVE-IVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++ AKP
Sbjct: 140 VGTVTMDVAGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKP 199
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRA 400
AG K YV + STMGP + + S++ A
Sbjct: 200 AGAKGN-----YVKRVAISSTMGPGVKIEVGSVTAA 230
>sp|B9JVM5|RL1_AGRVS 50S ribosomal protein L1 OS=Agrobacterium vitis (strain S4 / ATCC
BAA-846) GN=rplA PE=3 SV=1
Length = 231
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L DAI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA GA
Sbjct: 23 LSDAISMVKERAVAKFDETIEIAMNLGVDPRHADQMVRGVVNLPNGTGRDVRVAVFARGA 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EARAAGA++VG +L+E I GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 83 KADEARAAGAEVVGAEDLVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ +K G ++F+++ +HAG+GK S + + L EN+ AF +A++ AKP
Sbjct: 142 VGTVTMDVAGAVKASKGGAVEFRVEKAGIIHAGIGKASFEAKALEENIKAFADAVIKAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
AG K YV + STMGP + S++
Sbjct: 202 AGAKGN-----YVKRVAISSTMGPGVKIDPSSVT 230
>sp|C3MAW8|RL1_RHISN 50S ribosomal protein L1 OS=Rhizobium sp. (strain NGR234) GN=rplA
PE=3 SV=1
Length = 232
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 138/219 (63%), Gaps = 6/219 (2%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
V L +A+ VK A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA
Sbjct: 20 VYGLTEAVTLVKERATAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
GA A+EA+AAGAD+VG +L+E I GK+D ++C +T MP + ++ K+L G+MP
Sbjct: 80 RGAKADEAKAAGADVVGAEDLVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMP 138
Query: 302 NPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLL 361
NPK GTVT DV AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++
Sbjct: 139 NPKVGTVTMDVTAAVKSSKGGAVEFRVEKAGIVHAGVGKASFDAKALEENIRAFADAVIK 198
Query: 362 AKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRA 400
AKP G K YV + STMGP + +LS A
Sbjct: 199 AKPTGAKGN-----YVKRVAISSTMGPGLKIDPATLSVA 232
>sp|Q92QI0|RL1_RHIME 50S ribosomal protein L1 OS=Rhizobium meliloti (strain 1021)
GN=rplA PE=3 SV=1
Length = 232
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 6/216 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+ VK A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA GA
Sbjct: 23 LTEAVTLVKERATAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGA 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG EL+E I GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 83 KADEAKAAGADVVGAEELVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DV AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++ AKP
Sbjct: 142 VGTVTMDVTGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRA 400
G K YV + STMGP V ++S A
Sbjct: 202 TGAKGN-----YVKRVAVSSTMGPGLKVDPATISAA 232
>sp|Q8UE05|RL1_AGRT5 50S ribosomal protein L1 OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=rplA PE=3 SV=2
Length = 231
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 134/214 (62%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L DAI VK A A FDETVE + L + PR + +VRG +NLP+G + VRVA FA G
Sbjct: 23 LTDAISMVKERAVAKFDETVEVSMNLGVDPRHADQMVRGVVNLPNGTGRDVRVAVFARGV 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA AAGAD+VG EL+E I GK+D ++C +T MP + ++ K+L G+MPNPK
Sbjct: 83 KADEATAAGADVVGAEELVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++ AKP
Sbjct: 142 VGTVTMDVAGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIKAFADAVIKAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
G K YV + STMGP + S++
Sbjct: 202 TGAKGN-----YVKRVAISSTMGPGVKIEPSSVT 230
>sp|A8LLK0|RL1_DINSH 50S ribosomal protein L1 OS=Dinoroseobacter shibae (strain DFL 12)
GN=rplA PE=3 SV=1
Length = 232
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 183 LDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAE 242
L + +A+ +KANA + FDETVE + L + PR + +VRG ++LP+G K VRVA FA
Sbjct: 21 LTVEEAVALIKANATSKFDETVEIAMCLGVDPRHADQMVRGVVSLPNGTGKTVRVAVFAR 80
Query: 243 GADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPN 302
G AEEA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL LMPN
Sbjct: 81 GPKAEEAQAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPIVGRLGKILGPRNLMPN 139
Query: 303 PKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLA 362
PK GTVT DV AV+ AK G ++FK + VHAG+GK S E L ENV AFV+A+ A
Sbjct: 140 PKVGTVTMDVKAAVEAAKGGEVQFKAEKAGVVHAGVGKASFDEAKLVENVRAFVDAVSKA 199
Query: 363 KPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
KP+G K + Y+ + STMGP V++ S +
Sbjct: 200 KPSGAKGS-----YMKKIALSSTMGPGVTVAVDSAT 230
>sp|B9KL80|RL1_RHOSK 50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=rplA PE=3 SV=1
Length = 232
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 140/218 (64%), Gaps = 6/218 (2%)
Query: 179 SRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVA 238
+ ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VRVA
Sbjct: 17 GKDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVA 76
Query: 239 FFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHG 298
FA GA A+EA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL
Sbjct: 77 VFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRN 135
Query: 299 LMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNA 358
LMPNPK GTVT DV AV+ AK G ++FK++ +HAG+GK+S + + L +NV AFV+A
Sbjct: 136 LMPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDA 195
Query: 359 LLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQS 396
+ AKPAG K T Y+ + STMGP V + S
Sbjct: 196 VNRAKPAGAKGT-----YLKKVSLSSTMGPGVSVDLTS 228
>sp|Q3J5T3|RL1_RHOS4 50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rplA PE=3 SV=1
Length = 232
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 140/218 (64%), Gaps = 6/218 (2%)
Query: 179 SRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVA 238
+ ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VRVA
Sbjct: 17 GKDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVA 76
Query: 239 FFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHG 298
FA GA A+EA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL
Sbjct: 77 VFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRN 135
Query: 299 LMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNA 358
LMPNPK GTVT DV AV+ AK G ++FK++ +HAG+GK+S + + L +NV AFV+A
Sbjct: 136 LMPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDA 195
Query: 359 LLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQS 396
+ AKPAG K T Y+ + STMGP V + S
Sbjct: 196 VNRAKPAGAKGT-----YLKKVSLSSTMGPGVSVDLTS 228
>sp|A3PGI6|RL1_RHOS1 50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=rplA1 PE=3 SV=1
Length = 232
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 140/218 (64%), Gaps = 6/218 (2%)
Query: 179 SRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVA 238
+ ++ + DA+ +K A A FDET+E + L + PR + +VRG + LP+G K VRVA
Sbjct: 17 GKDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVA 76
Query: 239 FFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHG 298
FA GA A+EA+AAGADIVG +L+E I SGK++ ++C +T MP + ++ KIL
Sbjct: 77 VFARGAKADEAKAAGADIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRN 135
Query: 299 LMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNA 358
LMPNPK GTVT DV AV+ AK G ++FK++ +HAG+GK+S + + L +NV AFV+A
Sbjct: 136 LMPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDA 195
Query: 359 LLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQS 396
+ AKPAG K T Y+ + STMGP V + S
Sbjct: 196 VNRAKPAGAKGT-----YLKKVSLSSTMGPGVSVDLTS 228
>sp|Q28UY1|RL1_JANSC 50S ribosomal protein L1 OS=Jannaschia sp. (strain CCS1) GN=rplA
PE=3 SV=1
Length = 232
Score = 188 bits (477), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 141/221 (63%), Gaps = 6/221 (2%)
Query: 178 ESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRV 237
E + + + +A+ +K N+K FDET+E ++L + PR + +VRGT+NLP+G K VRV
Sbjct: 16 EGKENITVEEAVALLKGNSKTKFDETIEIAMKLGVDPRHADQMVRGTVNLPNGTGKTVRV 75
Query: 238 AFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQH 297
A FA G AEEA AAGADIVG +L+E + G ++ ++C +T MP + ++ K+L
Sbjct: 76 AVFARGPKAEEATAAGADIVGAEDLMETV-QGGTIEFDRCIATPDMMPIVGRLGKVLGPR 134
Query: 298 GLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVN 357
LMPNPK GTVT DV AV+ AK G ++FK + VHAG+GK S E L ENV AFV+
Sbjct: 135 NLMPNPKIGTVTMDVKEAVEAAKGGQVQFKAEKAGVVHAGVGKASFTEAQLVENVRAFVD 194
Query: 358 ALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
A+ AKP+G K T Y+ ++ STMGP +S+++ +
Sbjct: 195 AVSKAKPSGSKGT-----YMQKINLTSTMGPGVSLSVENAT 230
>sp|B5ZYS4|RL1_RHILW 50S ribosomal protein L1 OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=rplA PE=3 SV=1
Length = 233
Score = 187 bits (476), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 135/211 (63%), Gaps = 6/211 (2%)
Query: 188 AIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGADAE 247
AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA G A+
Sbjct: 24 AIGMVKERAVAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGVKAD 83
Query: 248 EARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQGT 307
EA+AAGADIVG +L+E I GK++ ++C +T MP + ++ K+L G+MPNPK GT
Sbjct: 84 EAKAAGADIVGAEDLVE-IVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGT 142
Query: 308 VTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKPAGL 367
VT DVA AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++ AKPAG
Sbjct: 143 VTMDVAGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKPAGA 202
Query: 368 KKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
K YV + STMGP + + S++
Sbjct: 203 KGN-----YVKRVAISSTMGPGVKIEVGSVT 228
>sp|B6JER6|RL1_OLICO 50S ribosomal protein L1 OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=rplA PE=3 SV=1
Length = 230
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
+ DAIK VK A A FDET+E + L + PR + +VRG + LP+G + +RV FA GA
Sbjct: 22 IADAIKLVKERATAKFDETIEVAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E I GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVE-IVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ AK G ++F+++ + AG+GK S EE L EN+ A +A++ AKP
Sbjct: 141 IGTVTMDVAGAVKGAKGGSVEFRVEKAGIIQAGVGKASFSEEKLVENIKALADAVVKAKP 200
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
AG K T YV + STMGP V SL+
Sbjct: 201 AGAKGT-----YVQRVAVSSTMGPGVKVEPGSLN 229
>sp|Q1MIF3|RL1_RHIL3 50S ribosomal protein L1 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=rplA PE=3 SV=1
Length = 233
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 137/216 (63%), Gaps = 6/216 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L AI VK A A FDET+E + L + PR + +VRG +NLP+G + VRVA FA GA
Sbjct: 21 LTLAIGMVKERAVAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGA 80
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGADIVG +L+E I GK++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 81 KADEAKAAGADIVGAEDLVE-IVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 139
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ +K G ++F+++ VHAG+GK S + L EN+ AF +A++ AKP
Sbjct: 140 VGTVTMDVAGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKP 199
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRA 400
AG K YV + STMGP + S++ A
Sbjct: 200 AGAKGN-----YVKRVAISSTMGPGVKIEPGSVTGA 230
>sp|A1B012|RL1_PARDP 50S ribosomal protein L1 OS=Paracoccus denitrificans (strain Pd
1222) GN=rplA PE=3 SV=1
Length = 233
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 139/218 (63%), Gaps = 6/218 (2%)
Query: 183 LDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAE 242
L + +A+K VK NA A FDETVE + L + PR + +VRG + LP+G K VRVA FA
Sbjct: 21 LAVEEAVKLVKENASAKFDETVEIAMNLGVDPRHADQMVRGVVTLPNGTGKDVRVAVFAR 80
Query: 243 GADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPN 302
G A+EA+AAGA+IVG +L+E I SGK++ ++C +T MP + ++ KIL LMPN
Sbjct: 81 GPKADEAKAAGAEIVGAEDLMETI-QSGKIEFDRCIATPDMMPLVGRLGKILGPRNLMPN 139
Query: 303 PKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLA 362
PK GTVT DV AV+ AK G ++FK + VHAG+GK S + E L EN+ AFV+A+ A
Sbjct: 140 PKVGTVTMDVKAAVEAAKGGEVQFKAEKAGVVHAGVGKASFEIEKLAENIRAFVDAVNRA 199
Query: 363 KPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRA 400
KP+G K T YV + STMGP + + S + A
Sbjct: 200 KPSGAKGT-----YVKKVSISSTMGPGVSLDLGSTAAA 232
>sp|Q11HB0|RL1_MESSB 50S ribosomal protein L1 OS=Mesorhizobium sp. (strain BNC1) GN=rplA
PE=3 SV=1
Length = 232
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K +K A A FDET+E + L + PR + +VRG +NLP+G ++VRVA FA+G
Sbjct: 23 LDEAVKVIKERATAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFAKGD 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGADIVG +L+E + G+++ ++C +T MP + ++ K+L GLMPNPK
Sbjct: 83 KADEAKAAGADIVGAEDLVETV-QKGEINFDRCIATPDMMPLVGRLGKVLGPRGLMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ +K G ++F+++ VHAG+GKVS E + ENV AF +A++ AKP
Sbjct: 142 VGTVTTDVAAAVKASKGGAVEFRVEKAGIVHAGVGKVSFDENAIAENVRAFADAVIKAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
+G K Y+ + STMGP + +L+
Sbjct: 202 SGAK-----GNYLKRVSITSTMGPGLKIDPSTLA 230
>sp|Q2W2H8|RL1_MAGSA 50S ribosomal protein L1 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rplA PE=3 SV=1
Length = 230
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 134/214 (62%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L DA+K +K A A FDET+E + L + PR + +VRG + LPHG K VRVA FA+G
Sbjct: 23 LADAVKAIKTRAVAKFDETIEIALNLGVDPRHADQMVRGVVELPHGTGKTVRVAVFAKGD 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
AEEAR AGADIVG +L + ++G +D ++ +T M + ++ K+L GLMPNPK
Sbjct: 83 KAEEARKAGADIVGEQDLFDA-CNAGNMDFDRVIATPDLMGLVGRLGKVLGPRGLMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT +V AV+ AK G ++F+++ VHAG+GK S EE L ENV AFV+A+ AKP
Sbjct: 142 LGTVTANVTEAVRAAKAGQVQFRVEKAGIVHAGIGKASFSEEKLAENVKAFVDAITKAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
G K T Y+ + STMGP + + +L+
Sbjct: 202 QGAKGT-----YLKKVSLSSTMGPGVKLDVATLA 230
>sp|A7HWQ1|RL1_PARL1 50S ribosomal protein L1 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rplA PE=3 SV=1
Length = 233
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 135/214 (63%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K VK A FDET+E + L + PR + +VRG + LP G + VRVA FA+G
Sbjct: 23 LDEAVKMVKDRASVKFDETIEVAIALGVDPRHADQMVRGVVALPSGSGRTVRVAVFAKGD 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A++ARAAGADIVG +L EI SGK+D ++C +T MP + ++ K+L GLMPNPK
Sbjct: 83 KADQARAAGADIVGDDDL-AEIVQSGKIDFDRCIATPDMMPLVGRLGKVLGPRGLMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ AK G ++F+++ +HAG+GK S E+ + N+ A ++A+ AKP
Sbjct: 142 VGTVTPDVAEAVKAAKGGAVEFRVEKAGIIHAGVGKASFSEDQILVNIRALIDAVQKAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
G K T Y+ + STMGP V QS++
Sbjct: 202 TGAKGT-----YIKRIAISSTMGPGVKVEPQSVA 230
>sp|B6IRP3|RL1_RHOCS 50S ribosomal protein L1 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplA PE=3 SV=1
Length = 235
Score = 184 bits (468), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 139/217 (64%), Gaps = 6/217 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K V++NA A FDETVE + L I PR + +VRG + LP+G K VRVA FA
Sbjct: 23 LDEAVKTVRSNATAKFDETVEIAMNLGIDPRHADQMVRGMVQLPNGTGKTVRVAVFARAG 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA AAGADIVG +L ++I +G+ + ++C +T M + ++ KIL GLMPNPK
Sbjct: 83 KADEALAAGADIVGAEDLADKI-QAGEFNFDRCIATPDMMGVVGRLGKILGPRGLMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT +VA AV+ AK G ++F+ + T VHAG+GK S E+ L EN+ AFV+A+ AKP
Sbjct: 142 LGTVTPNVAEAVKAAKGGAVEFRAEKTGIVHAGVGKASFSEQALEENIRAFVSAINRAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRAL 401
+G K T Y+ + STMGP + I +L +L
Sbjct: 202 SGAKGT-----YIEKVSLSSTMGPGIKLDIPALVASL 233
>sp|Q160X4|RL1_ROSDO 50S ribosomal protein L1 OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=rplA PE=3 SV=1
Length = 232
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 6/209 (2%)
Query: 187 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGADA 246
+A+ +KAN+ FDETVE + L + PR + +VRG + LP+G K VRVA FA GA A
Sbjct: 25 EAVALIKANSSVKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFARGAKA 84
Query: 247 EEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQG 306
+EA AAGADIVG +L+E + SGK++ ++C +T MP + ++ K+L LMPNPK G
Sbjct: 85 DEATAAGADIVGAEDLMETV-QSGKIEFDRCIATPDMMPIVGRLGKVLGPRNLMPNPKVG 143
Query: 307 TVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKPAG 366
TVT DV AV+ AK G ++FK + VHAG+GK+S E L EN+ AFV A+ AKP G
Sbjct: 144 TVTMDVEAAVKAAKGGEVQFKAEKGGVVHAGVGKLSFDEAKLVENIRAFVGAVSKAKPTG 203
Query: 367 LKKTSKFAGYVNSFHMCSTMGPSFPVSIQ 395
K Y+ + STMGP V+I+
Sbjct: 204 AK-----GAYMKKIALSSTMGPGVSVAIE 227
>sp|Q89J70|RL1_BRAJA 50S ribosomal protein L1 OS=Bradyrhizobium japonicum (strain USDA
110) GN=rplA PE=3 SV=1
Length = 230
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +AIK VK AKA FDET+E + L + PR + +VRG + LP+G + +RV FA GA
Sbjct: 22 LAEAIKMVKERAKAKFDETIEVAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E++ +G +D ++C +T MP + ++ K+L GLMPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVEKV-QNGSIDFDRCIATPDMMPLVGRLGKVLGPRGLMPNPK 140
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DV AV+ AK G ++F+++ + AG+GK S EE L EN+ A +A+ AKP
Sbjct: 141 IGTVTMDVTGAVKGAKGGSVEFRVEKAGILQAGVGKASFSEEKLVENIKALADAVSKAKP 200
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPV 392
AG K T Y+ + STMGP V
Sbjct: 201 AGSKGT-----YIQRVAVSSTMGPGVKV 223
>sp|Q0ANP0|RL1_MARMM 50S ribosomal protein L1 OS=Maricaulis maris (strain MCS10) GN=rplA
PE=3 SV=1
Length = 232
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
Query: 187 DAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGADA 246
DA+ VK+NAKA FDET+E + L + PR + +VRG NLP+G ++VRVA FA+G A
Sbjct: 25 DAVAHVKSNAKAKFDETIELAINLGVDPRHADQMVRGVCNLPNGTGRSVRVAVFAKGPKA 84
Query: 247 EEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQG 306
EEA AGAD+VG +L+E+I G ++ +K +T MP + ++ K+L G+MPNPK G
Sbjct: 85 EEATKAGADVVGAEDLMEQI-QGGNINFDKVIATPDMMPLVGRLGKVLGPRGMMPNPKVG 143
Query: 307 TVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKPAG 366
TVT V +AV ++K G ++F+++ +HAG+GK S E L ENV A V+A++ AKP+G
Sbjct: 144 TVTMGVTKAVNDSKGGAVEFRVEKAGIIHAGVGKASFTEAALAENVRALVDAIVKAKPSG 203
Query: 367 LKKTSKFAGYVNSFHMCSTMGPSFPV 392
K YV + STMGP +
Sbjct: 204 AKGL-----YVRRIALSSTMGPGVKI 224
>sp|Q211C5|RL1_RHOPB 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain
BisB18) GN=rplA PE=3 SV=1
Length = 230
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 6/213 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L DAIK VK A + FDET+E + L + PR + +VRG + LP+G + +RV FA GA
Sbjct: 22 LADAIKMVKERAVSKFDETIEIAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EARAAGAD+VG +L+E++ G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEARAAGADVVGAEDLVEKV-QGGTIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT D+ AV+ AK G ++F+++ V AG+GK S E+ L EN+ A +A+ AKP
Sbjct: 141 IGTVTMDITNAVKGAKGGSVEFRVEKAGIVQAGIGKASFGEDKLVENIKALTDAVSKAKP 200
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
AG K T Y+ + STMGP V S+
Sbjct: 201 AGAKGT-----YIQRVAVSSTMGPGVKVEPGSI 228
>sp|A6Q1M0|RL1_NITSB 50S ribosomal protein L1 OS=Nitratiruptor sp. (strain SB155-2)
GN=rplA PE=3 SV=1
Length = 235
Score = 178 bits (451), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 135/222 (60%), Gaps = 6/222 (2%)
Query: 176 KKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAV 235
K E + + +A+K+VK A FDETVE +RL + PR + +VRG++ LPHG K V
Sbjct: 15 KIEKGKIYSIDEAVKKVKELKSAKFDETVELALRLGVDPRHADQMVRGSVVLPHGTGKTV 74
Query: 236 RVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILN 295
RVA FA+GA A+EA+ GADIVG +L+E+I +G +D + +T M + KI +IL
Sbjct: 75 RVAVFAKGAKADEAKECGADIVGAEDLVEQI-QNGNIDFDIAIATPDMMGLVGKIGRILG 133
Query: 296 QHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAF 355
GLMPNPK GTVT DV +AV+ AK G + F++D N+HAG+GK S EE L+EN+ F
Sbjct: 134 PKGLMPNPKTGTVTMDVCQAVKNAKAGQVNFRVDKKGNIHAGIGKASFSEEALKENLETF 193
Query: 356 VNALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
V + KPA K Y+ + TM P+ ++ Q L
Sbjct: 194 VAQINKLKPAAAK-----GRYIQHAALSLTMSPAVELNTQEL 230
>sp|Q6NJG9|RL1_CORDI 50S ribosomal protein L1 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=rplA PE=3
SV=1
Length = 235
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 134/212 (63%), Gaps = 8/212 (3%)
Query: 186 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGAD 245
+ A + VK + D TV+ +RL + PRK + +VRGT++LP+G K+VRVA FAEG
Sbjct: 24 LKAAELVKETSSKNCDATVDVAIRLGVDPRKADQLVRGTVSLPNGTGKSVRVAVFAEGEK 83
Query: 246 AEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQ 305
A EA+AAGADIVG ELIE+I ++G ++ + +T M ++ +++++L GLMPNPK
Sbjct: 84 ATEAQAAGADIVGTTELIEQI-TAGTIEFDVAIATPDQMAKVGRVARVLGPRGLMPNPKT 142
Query: 306 GTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKPA 365
GTVTNDVA+A+ E K G I F++D SN+HA +GK S E L EN GA ++ + KP+
Sbjct: 143 GTVTNDVAKAIAEVKGGKISFRVDKASNLHAIIGKASFDAEKLAENYGALLDEINRIKPS 202
Query: 366 GLKKTSKFAGYVNSFHMCSTMGPSFPV--SIQ 395
K YV + ST GP PV SIQ
Sbjct: 203 SAKGI-----YVKKVTLTSTFGPGVPVDPSIQ 229
>sp|B0UHY1|RL1_METS4 50S ribosomal protein L1 OS=Methylobacterium sp. (strain 4-46)
GN=rplA PE=3 SV=1
Length = 235
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
V L DA+K +K +KA FDET E + L + PR + +VRG NLP+G + VRVA FA
Sbjct: 20 VYSLTDAVKMIKDRSKAKFDETFEISMNLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
GA A+EARAAGADIVG +L+E I G +D ++C +T MP + ++ K+L GLMP
Sbjct: 80 RGAKADEARAAGADIVGAEDLLETI-QGGTIDFDRCIATPDMMPLVGRLGKVLGPRGLMP 138
Query: 302 NPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLL 361
NPK GTVT DV AV AK G ++F+++ VHAG+GKVS ++ + EN AF +A+
Sbjct: 139 NPKVGTVTMDVKGAVGAAKGGAVEFRVEKAGIVHAGIGKVSFDDQKIVENARAFADAVAR 198
Query: 362 AKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
AKP G K T Y+ + STMGP V S+
Sbjct: 199 AKPTGAKGT-----YIQRIAVSSTMGPGIKVDPASV 229
>sp|B9KFG4|RL1_CAMLR 50S ribosomal protein L1 OS=Campylobacter lari (strain RM2100 / D67
/ ATCC BAA-1060) GN=rplA PE=3 SV=1
Length = 233
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 132/214 (61%), Gaps = 7/214 (3%)
Query: 185 LMD-AIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEG 243
LMD AI VK A A FDETVE ++L + PR + +VRG++ LP G K VRVA A+
Sbjct: 22 LMDEAISTVKTLASAKFDETVEIALKLNVDPRHADQMVRGSVVLPCGTGKKVRVAVIAKD 81
Query: 244 ADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNP 303
A A+EA+ AGADIVG +L+EEI G ++ + +T M + K+ +IL GLMPNP
Sbjct: 82 AKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNP 140
Query: 304 KQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAK 363
K GTVT DVA+AV AK G + F++D N+HAGLGKVS +E L+EN+ AFV A+ K
Sbjct: 141 KTGTVTMDVAQAVNNAKNGQVNFRVDKQGNIHAGLGKVSFTQEQLKENMSAFVKAINKHK 200
Query: 364 PAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
PA K Y+ + + TM PS + Q L
Sbjct: 201 PAAAK-----GRYIKNASLSLTMSPSLSLDTQEL 229
>sp|Q2IXS7|RL1_RHOP2 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain
HaA2) GN=rplA PE=3 SV=1
Length = 229
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 132/208 (63%), Gaps = 6/208 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K VK A + FDET+E + L + PR + +VRG + LP+G + VRV FA GA
Sbjct: 22 LDEAVKMVKERAVSKFDETIEVALNLGVDPRHADQMVRGVVMLPNGTGRTVRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E++ +G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVEQV-QAGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ AK G ++F+++ V AG+GK S EE L EN+ A +A+ AKP
Sbjct: 141 IGTVTMDVAGAVKGAKGGSVEFRVEKAGIVQAGVGKASFSEEKLVENIKALADAVTKAKP 200
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPV 392
G K T Y+ + S+MGP V
Sbjct: 201 TGAKGT-----YIQRVAVSSSMGPGVKV 223
>sp|C4LL88|RL1_CORK4 50S ribosomal protein L1 OS=Corynebacterium kroppenstedtii (strain
DSM 44385 / CCUG 35717) GN=rplA PE=3 SV=1
Length = 237
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 6/207 (2%)
Query: 186 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGAD 245
+DA+K VK A +++D TV+ +RL + PRK + +VRGT++LP+G K VRV FAEG +
Sbjct: 24 IDAMKTVKETAYSSYDPTVDVAIRLGVDPRKADQLVRGTVSLPNGTGKEVRVVVFAEGPN 83
Query: 246 AEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQ 305
A A AGAD+VG EL+E I G D + +T M ++ +++++L GLMPNPK
Sbjct: 84 ATAAEEAGADVVGTAELVERI-QGGWTDFDAAIATPDQMAKVGRVARVLGPRGLMPNPKT 142
Query: 306 GTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKPA 365
GTVT DV +AV+E K G I F++D +N+HA LGK S E L EN GA ++ LL KP+
Sbjct: 143 GTVTTDVTKAVKEIKGGKISFRVDKAANLHAVLGKASFSAEQLAENYGALIDELLRVKPS 202
Query: 366 GLKKTSKFAGYVNSFHMCSTMGPSFPV 392
K Y+ + T GP+ PV
Sbjct: 203 AAKGR-----YLKKVTVSCTNGPAVPV 224
>sp|Q9ZE23|RL1_RICPR 50S ribosomal protein L1 OS=Rickettsia prowazekii (strain Madrid E)
GN=rplA PE=3 SV=1
Length = 238
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 145/229 (63%), Gaps = 6/229 (2%)
Query: 170 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPH 229
I+ +K +S + +L +A+ Q+K+ + FD T+E ++L I PR ++ IVRG +NLP
Sbjct: 16 IREAREKVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKLGIDPRHSDQIVRGVVNLPA 75
Query: 230 GDKKAVRVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFK 289
G K +RVA + EEA++AGAD+VG + +I+EI +G+++ + C +T M +
Sbjct: 76 GTGKTIRVAVICKEEREEEAKSAGADLVGSINIIDEI-KAGQINFDVCIATPDMMSMISS 134
Query: 290 ISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLR 349
+++IL GLMPNPK GTVT D+ A++ AK G ++++ + +HAGLGK+S ++ L
Sbjct: 135 VARILGPKGLMPNPKLGTVTLDIKNAIKNAKSGQVEYRAEKAGIIHAGLGKLSFSDQDLL 194
Query: 350 ENVGAFVNALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
+N+ AF+ A++ AKP GLK Y+ + ++ STMG S + + S+S
Sbjct: 195 KNLNAFIGAVIKAKPVGLK-----GNYLKAIYLSSTMGASVQIDLTSIS 238
>sp|A5V9F6|RL1_SPHWW 50S ribosomal protein L1 OS=Sphingomonas wittichii (strain RW1 /
DSM 6014 / JCM 10273) GN=rplA PE=3 SV=1
Length = 232
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 139/230 (60%), Gaps = 6/230 (2%)
Query: 171 KPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHG 230
K ++ +S+ + + +AI K NA + FDET+E + L + PR + +VRG + LP G
Sbjct: 9 KNQAASVDSQKLYGVDEAIALAKQNATSKFDETIEVALNLGVDPRHADQMVRGVVTLPKG 68
Query: 231 DKKAVRVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKI 290
K VRV FA GA A+EA+AAGA++VG +L+E I G +D ++C +T M + ++
Sbjct: 69 TGKDVRVGVFARGAKADEAKAAGAEVVGAEDLLETI-QGGTVDFDRCIATPDMMGLVGRL 127
Query: 291 SKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRE 350
KIL GLMPNPK GTVT +VA AV+ AK G ++F+++ +H+G+GK S E LR
Sbjct: 128 GKILGPKGLMPNPKLGTVTMNVAEAVKAAKGGQVEFRVEKAGIIHSGIGKASFPAEDLRA 187
Query: 351 NVGAFVNALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLSRA 400
N AFV+A++ AKP G K Y+ + STMGP + + ++ A
Sbjct: 188 NFDAFVDAIVKAKPTGAKGK-----YLKKAAVSSTMGPGVKIDVADVAGA 232
>sp|Q8FSA5|RL1_COREF 50S ribosomal protein L1 OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=rplA PE=3 SV=1
Length = 236
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 6/207 (2%)
Query: 186 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGAD 245
+ A + VK + FD +V+ +RL + PRK + +VRGT++LP+G K VRVA FA G
Sbjct: 24 LQAAELVKETSSKNFDASVDVAIRLGVDPRKADQLVRGTVSLPNGTGKTVRVAVFAAGEK 83
Query: 246 AEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQ 305
A EA AAGAD VG EL+E I G D + +T M ++ +I+++L GLMPNPK
Sbjct: 84 ATEAEAAGADFVGTDELVERI-QGGWTDFDVAIATPDQMAKIGRIARVLGPRGLMPNPKT 142
Query: 306 GTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKPA 365
GTVTNDVA+A++E K G I F++D SN+HA +GK S + L EN GA ++ LL KP+
Sbjct: 143 GTVTNDVAKAIEEVKGGKISFRVDKASNLHAAIGKASFDAKALAENYGALIDELLRIKPS 202
Query: 366 GLKKTSKFAGYVNSFHMCSTMGPSFPV 392
K Y+ M ST GP V
Sbjct: 203 SSKGI-----YLKKITMSSTTGPGVAV 224
>sp|Q134R4|RL1_RHOPS 50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain
BisB5) GN=rplA PE=3 SV=1
Length = 229
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 133/213 (62%), Gaps = 6/213 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +A+K VK A + FDET+E + L + PR + +VRG + LP+G + +RV FA GA
Sbjct: 22 LDEAVKMVKERATSKFDETIEVALNLGVDPRHADQMVRGVVMLPNGTGRTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA+AAGAD+VG +L+E++ G ++ ++C +T MP + ++ K+L G+MPNPK
Sbjct: 82 KADEAKAAGADVVGAEDLVEQV-QGGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ AK G ++F+++ V AG+GK S EE L EN+ A +A+ AKP
Sbjct: 141 IGTVTMDVAGAVKGAKGGSVEFRVEKAGIVQAGVGKASFTEEKLVENIKALADAVTKAKP 200
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
G K T Y+ + S+MGP V S+
Sbjct: 201 TGAKGT-----YIQRVAVSSSMGPGVKVEPGSI 228
>sp|Q1GK53|RL1_RUEST 50S ribosomal protein L1 OS=Ruegeria sp. (strain TM1040) GN=rplA
PE=3 SV=1
Length = 232
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 183 LDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAE 242
L + +A+ VKANA FDETVE + L + R + +VRG + LP+G K +RVA FA
Sbjct: 21 LTIEEAVALVKANATTKFDETVEIAMNLGVDTRHADQMVRGVVGLPNGTGKTMRVAVFAR 80
Query: 243 GADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPN 302
G A+EA+ AGADIVG +L+E I G +D ++C +T MP + ++ K+L LMPN
Sbjct: 81 GPKADEAKEAGADIVGAEDLMETI-QGGTIDFDRCIATPDMMPVVGRLGKVLGPRNLMPN 139
Query: 303 PKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLA 362
PK GTVT DV AV+ AK G ++FK + VHAG+GK S E L ENV AFV+A+ A
Sbjct: 140 PKVGTVTMDVKAAVEAAKGGEVQFKAEKGGVVHAGVGKASFDEAKLVENVRAFVSAVAKA 199
Query: 363 KPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQS 396
KP+G K Y+ + STMGP + +
Sbjct: 200 KPSGAK-----GAYMKKIVLSSTMGPGVTLDVDG 228
>sp|A9H3T0|RL1_GLUDA 50S ribosomal protein L1 OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=rplA PE=3 SV=1
Length = 231
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 132/214 (61%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L +AI VK A A FDET+E + L I PR + +VRG ++LP+G K +RV FA GA
Sbjct: 22 LDEAIALVKQVATAKFDETIEISLNLGIDPRHADQMVRGLLSLPNGTGKTLRVGVFARGA 81
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
AEEA AAGAD+VG +L E++ +G++ ++C +T M + ++ KIL GLMPNPK
Sbjct: 82 KAEEALAAGADVVGAEDLAEKV-QAGEIAFDRCIATPDMMALVGRLGKILGPRGLMPNPK 140
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DV AV AK G ++++ + +HAG+GK S + + L EN+ AFV+A+ AKP
Sbjct: 141 LGTVTMDVKGAVTAAKSGQVEYRAEKAGIIHAGIGKASFEGDKLAENIRAFVDAVQKAKP 200
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
G K T Y+ + STMGP V + + S
Sbjct: 201 TGAKGT-----YLRKAALSSTMGPGIRVDVSAFS 229
>sp|B8IS73|RL1_METNO 50S ribosomal protein L1 OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=rplA PE=3 SV=1
Length = 235
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 182 VLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFA 241
V L DA+K +K AKA FDET E + L + PR + +VRG NLP+G + VRVA FA
Sbjct: 20 VYSLADAVKLIKERAKAKFDETFEISMNLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFA 79
Query: 242 EGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMP 301
GA A+EA+AAGADIVG +L+E I G ++ ++C +T MP + ++ K+L GLMP
Sbjct: 80 RGAKADEAKAAGADIVGAEDLLETI-QGGTINFDRCIATPDMMPLVGRLGKVLGPRGLMP 138
Query: 302 NPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLL 361
NPK GTVT DV AV AK G ++F+++ VHAG+GKVS ++ + EN AF +A+
Sbjct: 139 NPKVGTVTMDVKGAVGAAKGGAVEFRVEKAGIVHAGIGKVSFDDQKIVENARAFADAVAR 198
Query: 362 AKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
AKP+G K T Y+ + STMGP V S+
Sbjct: 199 AKPSGAKGT-----YIQRIAVSSTMGPGIKVDPASV 229
>sp|Q4JT18|RL1_CORJK 50S ribosomal protein L1 OS=Corynebacterium jeikeium (strain K411)
GN=rplA PE=3 SV=1
Length = 236
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 125/207 (60%), Gaps = 6/207 (2%)
Query: 186 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGAD 245
+ A K VK + FD TV+ +RL + PRK + +VRGT++LP+G K VRV FAEG +
Sbjct: 24 LAAAKAVKETSSKNFDATVDVAIRLGVDPRKADQLVRGTVSLPNGTGKEVRVVVFAEGPN 83
Query: 246 AEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQ 305
A A AGAD+VG ELIE+I G D + +T M ++ +++++L GLMPNPK
Sbjct: 84 ATAAEEAGADVVGTAELIEKI-QGGWTDFDAAIATPDQMAKVGRVARVLGPRGLMPNPKT 142
Query: 306 GTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKPA 365
GTVT DVA+AV E K G I F++D +N+HA LGK S E+ L EN GA ++ LL KP+
Sbjct: 143 GTVTTDVAKAVAEIKGGKISFRVDKAANLHAILGKASFTEKQLAENYGALIDELLRLKPS 202
Query: 366 GLKKTSKFAGYVNSFHMCSTMGPSFPV 392
K Y M ST GP PV
Sbjct: 203 SSKGR-----YFKKVTMSSTNGPGVPV 224
>sp|Q5HVZ2|RL1_CAMJR 50S ribosomal protein L1 OS=Campylobacter jejuni (strain RM1221)
GN=rplA PE=3 SV=1
Length = 233
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 135/228 (59%), Gaps = 6/228 (2%)
Query: 170 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPH 229
+K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP
Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPA 67
Query: 230 GDKKAVRVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFK 289
G K VRVA A+ A A+EA+ AGADIVG +L+EEI G ++ + +T M + K
Sbjct: 68 GTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGK 126
Query: 290 ISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLR 349
+ +IL GLMPNPK GTVT DVA+AV AK G + F++D N+HAGLGKVS +E L
Sbjct: 127 VGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVDKQGNIHAGLGKVSFSKEQLW 186
Query: 350 ENVGAFVNALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
+NV FV A+ KPA K Y+ + + TM PS + Q L
Sbjct: 187 DNVSTFVKAINKHKPAAAK-----GRYIKNAALSLTMSPSVKLETQEL 229
>sp|A1VYJ1|RL1_CAMJJ 50S ribosomal protein L1 OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=rplA PE=3 SV=1
Length = 233
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 135/228 (59%), Gaps = 6/228 (2%)
Query: 170 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPH 229
+K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP
Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPA 67
Query: 230 GDKKAVRVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFK 289
G K VRVA A+ A A+EA+ AGADIVG +L+EEI G ++ + +T M + K
Sbjct: 68 GTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGK 126
Query: 290 ISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLR 349
+ +IL GLMPNPK GTVT DVA+AV AK G + F++D N+HAGLGKVS +E L
Sbjct: 127 VGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVDKQGNIHAGLGKVSFSKEQLW 186
Query: 350 ENVGAFVNALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
+NV FV A+ KPA K Y+ + + TM PS + Q L
Sbjct: 187 DNVSTFVKAINKHKPAAAK-----GRYIKNAALSLTMSPSVKLETQEL 229
>sp|Q9PI34|RL1_CAMJE 50S ribosomal protein L1 OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=rplA PE=3 SV=1
Length = 233
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 135/228 (59%), Gaps = 6/228 (2%)
Query: 170 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPH 229
+K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP
Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPA 67
Query: 230 GDKKAVRVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFK 289
G K VRVA A+ A A+EA+ AGADIVG +L+EEI G ++ + +T M + K
Sbjct: 68 GTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGK 126
Query: 290 ISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLR 349
+ +IL GLMPNPK GTVT DVA+AV AK G + F++D N+HAGLGKVS +E L
Sbjct: 127 VGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVDKQGNIHAGLGKVSFSKEQLW 186
Query: 350 ENVGAFVNALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
+NV FV A+ KPA K Y+ + + TM PS + Q L
Sbjct: 187 DNVSTFVKAINKHKPAAAK-----GRYIKNAALSLTMSPSVKLETQEL 229
>sp|A7H4Q8|RL1_CAMJD 50S ribosomal protein L1 OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=rplA PE=3
SV=1
Length = 233
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 135/228 (59%), Gaps = 6/228 (2%)
Query: 170 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPH 229
+K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP
Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPA 67
Query: 230 GDKKAVRVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFK 289
G K VRVA A+ A A+EA+ AGADIVG +L+EEI G ++ + +T M + K
Sbjct: 68 GTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGK 126
Query: 290 ISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLR 349
+ +IL GLMPNPK GTVT DVA+AV AK G + F++D N+HAGLGKVS +E L
Sbjct: 127 VGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVDKQGNIHAGLGKVSFSKEQLW 186
Query: 350 ENVGAFVNALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
+NV FV A+ KPA K Y+ + + TM PS + Q L
Sbjct: 187 DNVSTFVKAINKHKPAAAK-----GRYIKNAALSLTMSPSVKLETQEL 229
>sp|A8FKR0|RL1_CAMJ8 50S ribosomal protein L1 OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=rplA PE=3
SV=1
Length = 233
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 135/228 (59%), Gaps = 6/228 (2%)
Query: 170 IKPESKKKESRPVLDLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPH 229
+K S+K +S L DAI +K A FDETVE ++L + PR + +VRG++ LP
Sbjct: 8 LKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVVLPA 67
Query: 230 GDKKAVRVAFFAEGADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFK 289
G K VRVA A+ A A+EA+ AGADIVG +L+EEI G ++ + +T M + K
Sbjct: 68 GTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI-QKGNMNFDVLIATPNLMGLVGK 126
Query: 290 ISKILNQHGLMPNPKQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLR 349
+ +IL GLMPNPK GTVT DVA+AV AK G + F++D N+HAGLGKVS +E L
Sbjct: 127 VGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVDKQGNIHAGLGKVSFSKEQLW 186
Query: 350 ENVGAFVNALLLAKPAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
+NV FV A+ KPA K Y+ + + TM PS + Q L
Sbjct: 187 DNVSTFVKAINKHKPAAAK-----GRYIKNAALSLTMSPSVKLETQEL 229
>sp|C5C0K8|RL1_BEUC1 50S ribosomal protein L1 OS=Beutenbergia cavernae (strain ATCC
BAA-8 / DSM 12333 / NBRC 16432) GN=rplA PE=3 SV=1
Length = 238
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 6/207 (2%)
Query: 186 MDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGAD 245
++A++ KA A FD TVE RL + PRK + +VRGT+NLPHG K RV FA G
Sbjct: 24 LEAVRLAKAGASTKFDSTVEVAFRLGVDPRKADQMVRGTVNLPHGTGKTARVLVFAVGER 83
Query: 246 AEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPKQ 305
AE+ARAAGAD VGG ELIE++A G +D + +T M ++ ++ ++L GLMPNP+
Sbjct: 84 AEQARAAGADEVGGDELIEKVA-GGYVDFDAAVATPDLMGKVGRLGRVLGPRGLMPNPRT 142
Query: 306 GTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKPA 365
GTVT DVA+AV+E K G I F++D +N+H +GK S E L EN + ++ +L KP+
Sbjct: 143 GTVTMDVAKAVEEIKGGKIDFRVDKHANLHVVVGKASFDETALVENYASVLDEVLRLKPS 202
Query: 366 GLKKTSKFAGYVNSFHMCSTMGPSFPV 392
K Y+ + +TMGP P+
Sbjct: 203 SSKGR-----YIVKATLSTTMGPGIPL 224
>sp|P29393|RL1_THEMA 50S ribosomal protein L1 OS=Thermotoga maritima (strain ATCC 43589
/ MSB8 / DSM 3109 / JCM 10099) GN=rplA PE=3 SV=1
Length = 233
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 132/214 (61%), Gaps = 5/214 (2%)
Query: 184 DLMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEG 243
DL +AI+ VK A A FDET+E H++ I RK E +RGT+ LPHG K V+V FA+G
Sbjct: 22 DLDEAIELVKKTATAKFDETIELHIQTGIDYRKPEQHIRGTIVLPHGTGKEVKVLVFAKG 81
Query: 244 ADAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNP 303
A+EA AGAD VG +L+E+I G LD + +T M + ++ KIL GLMP+P
Sbjct: 82 EKAKEALEAGADYVGAEDLVEKIEKEGFLDFDVAIATPDMMRIIGRLGKILGPRGLMPSP 141
Query: 304 KQGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAK 363
K GTVT +VA AV+E K+G I+ + D T N+H +GK S E L+EN+ A + ++ K
Sbjct: 142 KSGTVTQEVAEAVKEFKKGRIEVRTDKTGNIHIPVGKRSFDNEKLKENIIAAIKQIMQMK 201
Query: 364 PAGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSL 397
PAG+K ++ + STMGP +++QSL
Sbjct: 202 PAGVK-----GQFIKKVVLASTMGPGIKLNLQSL 230
>sp|P36248|RL1_LIBAS 50S ribosomal protein L1 OS=Liberibacter asiaticus GN=rplA PE=3
SV=1
Length = 232
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
L DA+ +K A A FDETVE + L I PR +VRG + +P+G VRVA FA +
Sbjct: 24 LSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNVRVAVFATSS 83
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EAR AGADIVGG +L E I G++D ++C +T MP + ++ +IL G+MPN +
Sbjct: 84 KADEAREAGADIVGGEDLFE-IVKGGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLR 142
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+E+K G + F+ + +HAG+GKVS + + + ENV AFV+A++ AKP
Sbjct: 143 VGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFENKKIEENVLAFVSAVVKAKP 202
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
+ K YV + STMG V + S S
Sbjct: 203 SVAK-----GDYVKRVTLSSTMGCGIKVDLSSFS 231
>sp|B8EMR8|RL1_METSB 50S ribosomal protein L1 OS=Methylocella silvestris (strain BL2 /
DSM 15510 / NCIMB 13906) GN=rplA PE=3 SV=1
Length = 231
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 185 LMDAIKQVKANAKATFDETVEAHVRLAIPPRKTELIVRGTMNLPHGDKKAVRVAFFAEGA 244
+ DAI +K A A FDETVE + L + P+ + +VRG +NLP+G + +RVA FA GA
Sbjct: 23 IRDAIALIKERASAKFDETVEIAMNLGVDPKHADQMVRGVVNLPNGTGRTLRVAVFARGA 82
Query: 245 DAEEARAAGADIVGGLELIEEIASSGKLDVEKCFSTRQFMPRLFKISKILNQHGLMPNPK 304
A+EA AAGADIVG +L+ + G + ++C +T MP + ++ K+L GLMPNPK
Sbjct: 83 KADEATAAGADIVGAEDLVATV-QGGTIAFDRCIATPDMMPLVGRLGKVLGPRGLMPNPK 141
Query: 305 QGTVTNDVARAVQEAKQGHIKFKMDNTSNVHAGLGKVSLKEELLRENVGAFVNALLLAKP 364
GTVT DVA AV+ +K G ++F+++ + +GK S ++ L EN+ AFV+A+ AKP
Sbjct: 142 VGTVTMDVAAAVKASKGGAVEFRVEKAGIIQGSVGKASFDDDKLAENIAAFVDAVAKAKP 201
Query: 365 AGLKKTSKFAGYVNSFHMCSTMGPSFPVSIQSLS 398
G K T Y+ + STMGP V +L+
Sbjct: 202 QGAKGT-----YIQRVAISSTMGPGVKVDPATLT 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,487,644
Number of Sequences: 539616
Number of extensions: 6384674
Number of successful extensions: 19274
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 17322
Number of HSP's gapped (non-prelim): 1041
length of query: 409
length of database: 191,569,459
effective HSP length: 120
effective length of query: 289
effective length of database: 126,815,539
effective search space: 36649690771
effective search space used: 36649690771
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)