BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015334
(409 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7E9|MCAC1_ARATH Protein MID1-COMPLEMENTING ACTIVITY 1 OS=Arabidopsis thaliana
GN=MCA1 PE=2 SV=1
Length = 421
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/372 (71%), Positives = 303/372 (81%), Gaps = 7/372 (1%)
Query: 3 NWEHFGEIANVAQLAGFDAVRLIGMIVKAATTARMHKKNCRQFAQHLKLIGNLLEQLKIS 62
+W+ GEIA+VAQL G DAV+LIG+IVKAA TA MHKKNCRQFAQHLKLIGNLLEQLKIS
Sbjct: 4 SWDGLGEIASVAQLTGLDAVKLIGLIVKAANTAWMHKKNCRQFAQHLKLIGNLLEQLKIS 63
Query: 63 ELKKYPETREPLEQLEDALRRSYLLVNSCQDRSYLYLLAMGWNIVYQFRKAQTEIDRYLK 122
E+KKYPETREPLE LEDALRRSYLLVNSC+DRSYLYLLAMGWNIVYQFRK Q EIDR+LK
Sbjct: 64 EMKKYPETREPLEGLEDALRRSYLLVNSCRDRSYLYLLAMGWNIVYQFRKHQDEIDRFLK 123
Query: 123 IVPLITLVDNARVRERLEDIEKDQREYTLDEEDQKMQDAILRREPSKHETMVLKKTLSTS 182
I+PLITLVDNAR+RER E I++DQREYTLDEED+ +QD IL++E ++ VLKKTLS S
Sbjct: 124 IIPLITLVDNARIRERFEYIDRDQREYTLDEEDRHVQDVILKQESTREAASVLKKTLSCS 183
Query: 183 YPKMGFNEVLQKENEKLQLELQRSQTQMDVSQCEVIQRLIDVTEAFSANHLPEEVS-PKK 241
YP + F E L+ ENEKLQ+ELQRSQ DV+QCEVIQRLI VT+A +A E KK
Sbjct: 184 YPNLRFCEALKTENEKLQIELQRSQEHYDVAQCEVIQRLIGVTQAAAAVEPDSEKELTKK 243
Query: 242 SSKKVECNYSDTDNGKNHSFNEKS-NKCDARTNSRNTSSVSSGRDLLSREGS--YQHEEW 298
+SKK E + +S++E S K R SR+TS+VSSG DLLSR S HEEW
Sbjct: 244 ASKKSE---RSSSMKTEYSYDEDSPKKSSTRAASRSTSNVSSGHDLLSRRASQAQHHEEW 300
Query: 299 HTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYSLILSCCCYTC 358
HTDLL CCSEP LC KTFF+PCGT +KIAT A++RH+SSAEACNELMAYSLILSCCCYTC
Sbjct: 301 HTDLLACCSEPSLCFKTFFFPCGTLAKIATAASNRHISSAEACNELMAYSLILSCCCYTC 360
Query: 359 CIRRKLRKTLNI 370
C+RRKLRKTLNI
Sbjct: 361 CVRRKLRKTLNI 372
>sp|B6SJQ0|CNR13_MAIZE Cell number regulator 13 OS=Zea mays GN=CNR13 PE=2 SV=1
Length = 428
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/383 (62%), Positives = 305/383 (79%), Gaps = 14/383 (3%)
Query: 1 MANWEHFGEIANVAQLAGFDAVRLIGMIVKAATTARMHKKNCRQFAQHLKLIGNLLEQLK 60
MA+W++ GE++N+AQL G DAV+LI +IV+AA+TAR+HK+NCR+FAQHLKLIG LLEQL+
Sbjct: 1 MASWDNLGELSNIAQLTGLDAVKLISLIVRAASTARLHKRNCRRFAQHLKLIGGLLEQLR 60
Query: 61 ISELKKYPETREPLEQLEDALRRSYLLVNSCQDRSYLYLLAMGWNIVYQFRKAQTEIDRY 120
+SEL+KYPETREPLEQLEDALRR YLLVNSCQDRSYLYLLAMGWNIVYQFRKAQ+EID Y
Sbjct: 61 VSELRKYPETREPLEQLEDALRRGYLLVNSCQDRSYLYLLAMGWNIVYQFRKAQSEIDNY 120
Query: 121 LKIVPLITLVDNARVRERLEDIEKDQREYTLDEEDQKMQDAILRREPSKHETMVLKKTLS 180
L++VPLITLVDNAR+R+RLE IE+DQ EY+ DEED+K+QDA+L +P + T+VLKKTLS
Sbjct: 121 LRLVPLITLVDNARIRDRLEYIERDQCEYSFDEEDKKVQDALLNPDPCTNPTIVLKKTLS 180
Query: 181 TSYPKMGFNEVLQKENEKLQLELQRSQTQMDVSQCEVIQRLIDVTEAFSANHLPEEVSPK 240
SYP + FNE L+KE+EKLQ+ELQRSQ+ MD+ CEVIQ L+ VT+ + +PE+ +
Sbjct: 181 CSYPNLPFNEALRKESEKLQVELQRSQSNMDLGSCEVIQHLLGVTKTVEST-IPEKETNV 239
Query: 241 KSSKKVECNYSDTDNGKNHSFNEKSN------------KCDARTNSRNTSSVSSGRDLLS 288
K+ +K NYS++ SF++ + + D + R +S V G DL+S
Sbjct: 240 KAPEKKGSNYSESKGETAKSFDDDDDYPKKQNGDYPKKQKDTCSTQRCSSQVPYGHDLVS 299
Query: 289 REGSYQHEEWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYS 348
GSY +EWH DLLGCCS+P LC+KT F+PCGTFS+IA++A R MSS EACN++MAYS
Sbjct: 300 SRGSYS-DEWHADLLGCCSKPALCLKTLFFPCGTFSRIASIAKDRPMSSGEACNDIMAYS 358
Query: 349 LILSCCCYTCCIRRKLRKTLNIA 371
LILSCCCYTCC+RRKLR+ L+IA
Sbjct: 359 LILSCCCYTCCVRRKLRQKLDIA 381
>sp|Q3EBY6|MCAC2_ARATH Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis thaliana
GN=MCA2 PE=2 SV=1
Length = 416
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/377 (64%), Positives = 282/377 (74%), Gaps = 20/377 (5%)
Query: 1 MAN-WEHFGEIANVAQLAGFDAVRLIGMIVKAATTARMHKKNCRQFAQHLKLIGNLLEQL 59
MAN W+ GEIA+VAQL G DA++LIGMIV AA TARMHKKNCRQFA HLKLI NLLEQ+
Sbjct: 1 MANSWDQLGEIASVAQLTGIDALKLIGMIVNAANTARMHKKNCRQFAHHLKLIRNLLEQI 60
Query: 60 KISELKKYPETREPLEQLEDALRRSYLLVNSCQDRSYLYLLAMGWNIVYQFRKAQTEIDR 119
K SE+ + E EPL+ L+DALRRSY+LV SCQ++SYLYLLAMGWNIV QF KAQ EID
Sbjct: 61 KNSEMNQRSEILEPLQGLDDALRRSYILVKSCQEKSYLYLLAMGWNIVNQFEKAQNEIDL 120
Query: 120 YLKIVPLITLVDNARVRERLEDIEKDQREYTLDEEDQKMQDAILRREPSKH-ETMVLKKT 178
+LKIVPLI + DNAR+RERLE IE+DQREYTLDEED+K+QD IL++E ++ T VLKKT
Sbjct: 121 FLKIVPLINMADNARIRERLEAIERDQREYTLDEEDRKVQDVILKQESTREAATSVLKKT 180
Query: 179 LSTSYPKMGFNEVLQKENEKLQLELQRSQTQMDVSQCEVIQRLIDVTE-AFSANHLPEEV 237
LS SYP MGF E L+ E EKLQLELQRS+ + D QCEVIQRLIDVT+ A + E+V
Sbjct: 181 LSRSYPNMGFCEALKTEEEKLQLELQRSRARYDADQCEVIQRLIDVTQTAATVEPNLEKV 240
Query: 238 SPKK----SSKKVECNYSDTDNGKNHSFNEKSNKCDARTNSRNTSSVSSGRDLLSREGSY 293
KK SSKK + Y DTD+ R +SR+TS VSSG +LLS
Sbjct: 241 LTKKEELTSSKKRDDLY-DTDSS------------SIRADSRSTSYVSSGHELLSGRSLQ 287
Query: 294 QHEEWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYSLILSC 353
WH DLL CCSEP LC+KT F+PCGT +KI+TVATSR +SS E C L+ YSLILSC
Sbjct: 288 HRGNWHADLLDCCSEPCLCLKTLFFPCGTLAKISTVATSRQISSTEVCKNLIVYSLILSC 347
Query: 354 CCYTCCIRRKLRKTLNI 370
CCYTCCIR+KLRKTLNI
Sbjct: 348 CCYTCCIRKKLRKTLNI 364
>sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2
PE=1 SV=1
Length = 152
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 297 EWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYSLILSCCC- 355
EW T C S+ C TF+ PC TF ++A + S A +++ C C
Sbjct: 15 EWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACI 74
Query: 356 YTCCIRRKLRKTLNI 370
Y+C R K+R NI
Sbjct: 75 YSCFYRGKMRAQYNI 89
>sp|Q9P241|AT10D_HUMAN Probable phospholipid-transporting ATPase VD OS=Homo sapiens
GN=ATP10D PE=2 SV=3
Length = 1426
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
Query: 96 YLYLLAMGW-NIVYQFRKAQTEIDRYLKIVPLITLVDNARVRERLEDIEKDQREYTLDEE 154
+L+L+ + W +V F+K T ++PL+ ++ +++ LED R+Y +D++
Sbjct: 103 FLFLVVLNWVPLVEAFQKEIT-------MLPLVVVLTIIAIKDGLEDY----RKYKIDKQ 151
Query: 155 DQKMQDAILRREPSKHETMVLKKTLSTSYPKMGFNEVLQKENEKL---------QLELQR 205
+ + R+ K+ K + ++ NEV+ + L +E
Sbjct: 152 INNLITKVYSRKEKKYIDRCWKDVTVGDFIRLSCNEVIPADMVLLFSTDPDGICHIETSG 211
Query: 206 SQTQMDVSQCEVIQRLIDVTEAFSANHLPEEVSPKKSSKKVECNYSDTDNGKNHSFNEKS 265
+ ++ Q +V++ + EV P+K S ++EC + D + F E S
Sbjct: 212 LDGESNLKQRQVVRGYAEQDS---------EVDPEKFSSRIECESPNNDLSRFRGFLEHS 262
Query: 266 NK 267
NK
Sbjct: 263 NK 264
>sp|A5IHU7|IF2_LEGPC Translation initiation factor IF-2 OS=Legionella pneumophila
(strain Corby) GN=infB PE=3 SV=1
Length = 868
Score = 39.3 bits (90), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 194 KENEKLQLELQRSQTQMDVSQC--EVIQRLIDVTEAFSANHLPEEVSPKKSSKKVECNYS 251
KE EK+ LE +++Q +++ +VI+ L+DV E EEV P+K SKK +
Sbjct: 159 KEEEKINLEENTAESQDELAHANTDVIENLVDVVEETIPVSKKEEVKPEKVSKKKHLEQT 218
Query: 252 DTD 254
DTD
Sbjct: 219 DTD 221
>sp|B6TZ45|CNR1_MAIZE Cell number regulator 1 OS=Zea mays GN=CNR1 PE=2 SV=1
Length = 191
Score = 39.3 bits (90), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 20/113 (17%)
Query: 288 SREGSYQHEEWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATV---ATSRHMSSAEACNEL 344
SR G +W T L C +P C+ T PC TF ++A + T ++S
Sbjct: 42 SRPGG-GLRKWSTGLFHCMDDPGNCLITCLCPCVTFGQVADIVDKGTCPCIASG------ 94
Query: 345 MAYSLILSC----CCYTCCIRRKLRKTLNI------AVFSPCHCKIISLCHQY 387
+ Y LI + C Y+C R KLR ++ + C C+ ++LC +Y
Sbjct: 95 LVYGLICASTGMGCLYSCLYRSKLRAEYDLDEGECPDILVHCCCEHLALCQEY 147
>sp|Q8K2X1|AT10D_MOUSE Probable phospholipid-transporting ATPase VD OS=Mus musculus
GN=Atp10d PE=2 SV=2
Length = 1416
Score = 38.5 bits (88), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 30/182 (16%)
Query: 96 YLYLLAMGW-NIVYQFRKAQTEIDRYLKIVPLITLVDNARVRERLEDIEKDQREYTLDEE 154
+L+L+ + W +V F+K T ++PL+ ++ +++ LED R+Y +D++
Sbjct: 103 FLFLVVLNWVPLVEAFQKEIT-------MLPLVVVLTIIAIKDGLEDY----RKYKIDKQ 151
Query: 155 DQKMQDAILRREPSKHETMVLKKTLSTSYPKMGFNEVLQKENEKL---------QLELQR 205
+ + R+ K+ K + ++ NE++ + L +E
Sbjct: 152 INNLITKVYSRKEKKYIDCCWKNVTVGDFIRLSCNEIIPADMVLLFSTDPDGICHIETSG 211
Query: 206 SQTQMDVSQCEVIQRLIDVTEAFSANHLPEEVSPKKSSKKVECNYSDTDNGKNHSFNEKS 265
+ ++ Q +V++ TE S EV P+K S ++EC + D + F E +
Sbjct: 212 LDGESNLKQRQVVR---GYTEQDS------EVDPEKFSSRIECESPNNDLSRFRGFLEHA 262
Query: 266 NK 267
NK
Sbjct: 263 NK 264
>sp|Q5X1C3|IF2_LEGPA Translation initiation factor IF-2 OS=Legionella pneumophila
(strain Paris) GN=infB PE=3 SV=1
Length = 868
Score = 38.5 bits (88), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 194 KENEKLQLELQRSQTQMDVSQC--EVIQRLIDVTEAFSANHLPEEVSPKKSSKKVECNYS 251
KE EK+ LE +++Q +++ +VI+ L+DV E EEV P+K SKK +
Sbjct: 159 KEEEKISLEENTAESQDELTHANTDVIENLVDVVEEAIPASKKEEVKPEKVSKKKHLEQT 218
Query: 252 DTD 254
D+D
Sbjct: 219 DSD 221
>sp|P0CW97|PCR3_ARATH Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana GN=PCR3
PE=3 SV=1
Length = 152
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 297 EWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYSLILSCCC- 355
EW T C S+ C T+ PC TF ++A + + S A + + I C C
Sbjct: 15 EWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGALYVLLAAITGCGCL 74
Query: 356 YTCCIRRKLRKTLNI 370
Y+C R K+R NI
Sbjct: 75 YSCIYRGKIRAQYNI 89
>sp|D9HP26|CNR10_MAIZE Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1
Length = 157
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Query: 291 GSYQHEEWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYSLI 350
G +W + LL C + LC T + PC TF ++A + R +S L A
Sbjct: 24 GPAASSQWSSGLLDCFDDCGLCCLTCWCPCITFGRVAEI-VDRGATSCGTAGALYAVLAY 82
Query: 351 LSCC--CYTCCIRRKLRKTLNIAVFSPCHCKI------ISLCHQY 387
+ C Y+C R K+R L + C C + +LC QY
Sbjct: 83 FTGCQWIYSCTYRAKMRAQLGLPETPCCDCLVHFCCEPCALCQQY 127
>sp|Q9M9A5|PCR6_ARATH Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana GN=PCR6
PE=2 SV=1
Length = 224
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 13/104 (12%)
Query: 294 QHEEWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYSLILSC 353
Q W + L C ++ + T +P TF +IA V S A M Y LI
Sbjct: 84 QPSNWTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTA---GMLYGLICCL 140
Query: 354 ----CCYTCCIRRKLRKTLNIA-VFSP-----CHCKIISLCHQY 387
C YTC R KLR + +P C C+ +LC +Y
Sbjct: 141 FAIPCVYTCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEY 184
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 83 RSYLLVNSCQDRSYLYLLAMGWNIVYQFRKAQTEIDRYLKIVPLITLVDNARVRERLEDI 142
RS +LV+ C S L+LL +I F EI L ++P+ L + +RE++E +
Sbjct: 116 RSKILVDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDLGLSDDIREQIELL 175
Query: 143 EKDQREYTL--DEEDQKMQDA 161
++ R+ L D+ D+ ++++
Sbjct: 176 QRQSRKARLYIDKNDESLRES 196
>sp|Q5WT36|IF2_LEGPL Translation initiation factor IF-2 OS=Legionella pneumophila
(strain Lens) GN=infB PE=3 SV=1
Length = 868
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 184 PKMGFNEVLQKENEKLQLELQRSQTQMDVSQC--EVIQRLIDVTEAFSANHLPEEVSPKK 241
P +E + KE EK+ E +++Q +++ +VI+ L+DV E EEV P+K
Sbjct: 150 PVAALDETV-KEEEKINSEENTAESQDELTHANTDVIENLVDVVEEAIPVSKKEEVKPEK 208
Query: 242 SSKKVECNYSDTD 254
SKK +D+D
Sbjct: 209 VSKKKHLEQTDSD 221
>sp|D9HP20|CNR4_MAIZE Cell number regulator 4 OS=Zea mays GN=CNR4 PE=2 SV=1
Length = 159
Score = 35.4 bits (80), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 297 EWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATV----ATSRHMSSAEACNELMAYSLILS 352
EW T L GC S+ C +F PC F ++A V TS ++ C L A ++
Sbjct: 10 EWTTGLCGCFSDCKSCCLSFLCPCIPFGQVAEVLDKGMTSCGLAGLLYCLLLHAGVAVVP 69
Query: 353 C-CCYTCCIRRKLRKTLNI 370
C C YTC RRKLR ++
Sbjct: 70 CHCIYTCTYRRKLRAAYDL 88
>sp|Q5ZRV4|IF2_LEGPH Translation initiation factor IF-2 OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=infB PE=3 SV=1
Length = 868
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 194 KENEKLQLELQRSQTQMDVSQC--EVIQRLIDVTEAFSANHLPEEVSPKKSSKKVECNYS 251
KE EK+ E +++Q +++ +VI+ L+DV E EEV P+K SKK +
Sbjct: 159 KEEEKINSEENTAESQDELTHANTDVIENLVDVVEETIPVSKKEEVKPEKVSKKKHLEQT 218
Query: 252 DTD 254
D+D
Sbjct: 219 DSD 221
>sp|B2V6N0|LON_SULSY Lon protease OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=lon
PE=3 SV=1
Length = 800
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 118 DRYLKIVPLITLVDNARVRERLEDIEKDQREYTLDEEDQKMQDAILRREPSKHETMVLKK 177
D++LK V ++ L R+ R E IEKDQREY L ++ + +Q+ + R+ + E KK
Sbjct: 206 DKFLKEVGILELQQKIRISAR-EAIEKDQREYFLRQQIKAIQEELGERDEKQEEIENYKK 264
Query: 178 TLSTS 182
+ S
Sbjct: 265 KIEES 269
>sp|Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana GN=PCR8
PE=1 SV=2
Length = 190
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 298 WHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYSLILSCCCYT 357
W T L C ++ + T PC TF +IA V M+ Y L++ C
Sbjct: 53 WSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLG---TFMYLLMMPALCSH 109
Query: 358 CCI----RRKLRKTLNI--AVFSPCH----CKIISLCHQY 387
+ R K+R+ N+ A +S C C SLC +Y
Sbjct: 110 WVMGSKYREKMRRKFNLVEAPYSDCASHVLCPCCSLCQEY 149
>sp|Q9JLC8|SACS_MOUSE Sacsin OS=Mus musculus GN=Sacs PE=1 SV=2
Length = 4582
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 57 EQLKISELKKYPETREPLEQLEDALRRS----YLLVNSCQDRSYLYL--LAMGWNIVYQF 110
E ++SE+ P + ++ L D LR + +N + S + G N++Y
Sbjct: 2708 EMAQVSEISSVPSSDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKATGGLNVLYSV 2767
Query: 111 RKAQTEIDRYLKIVPLITLVDNARVRERLEDIEKDQREYTLDEED 155
+ T+ DR + +++D+ + +L+DI Q YT+D ED
Sbjct: 2768 KGKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQITYTMDTED 2812
>sp|Q9LS43|PCR7_ARATH Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7
PE=2 SV=1
Length = 133
Score = 33.9 bits (76), Expect = 2.5, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 15/103 (14%)
Query: 296 EEWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEACNELMAYSLILSC-- 353
++W + L C + T F PC TF +IA ++ C + ++ C
Sbjct: 3 KQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISD----EGRTGCGRCGVFYGLICCVV 58
Query: 354 ---CCYTCCIRRKLRKTLNI--AVFSPC----HCKIISLCHQY 387
C ++C R K+R + + S C C+ +LC ++
Sbjct: 59 GLPCLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEH 101
>sp|B0BNY0|ARGA_ACTPJ Amino-acid acetyltransferase OS=Actinobacillus pleuropneumoniae
serotype 3 (strain JL03) GN=argA PE=3 SV=1
Length = 437
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 179 LSTSYPKMGF-NEVLQKENEKLQLELQRSQTQMDVSQCEVIQRLIDVTEAFSANHLPEEV 237
L+TS+ G N + E + + ++ R Q +M++S +I+R V + NH PEE
Sbjct: 293 LATSFDIPGLLNLIRPLEEQGILVKRSREQLEMEISNYTIIERDGIVIACAALNHYPEEK 352
Query: 238 SPKKSSKKVECNYSDTDNG 256
+ + V +Y D+ G
Sbjct: 353 MAEMACVAVHPDYRDSSRG 371
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/137 (20%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 31 AATTARMHKKNCRQFAQHLKLIGNLLEQLKISELKKYPETREPLE---QLEDALRRSYLL 87
AA+ A++H C++ + L + ++ L+ + P ++ ++ L AL ++ +
Sbjct: 12 AASDAKLHGDMCKELSGVLCKVLSIFPSLEGAR----PRSKSGIQALCSLHIALEKAKNI 67
Query: 88 VNSCQDRSYLYLLAMGWNIVYQFRKAQTE-IDRYLKIVPLITLVDNARVRERLEDIEKDQ 146
+ C + S LYL G ++ +F KA+ ID ++ ++ +++ E + ++E +
Sbjct: 68 LQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVGELENTR 127
Query: 147 REYTLDEEDQKMQDAIL 163
+ LD ++++ D I+
Sbjct: 128 --FMLDPSEKEVGDQII 142
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 31 AATTARMHKKNCRQFAQHLKLIGNLLEQLKISELKKYPETREPLE---QLEDALRRSYLL 87
A A++H K C + I ++ L+ + P ++ ++ L L + +
Sbjct: 12 APGDAKLHGKMCNALSVIYCKIMSIFPSLEAAR----PRSKSGIQALCSLHVVLEKVKNI 67
Query: 88 VNSCQDRSYLYLLAMGWNIVYQFRKAQTEI-DRYLKIVPLITLVDNARVRERLEDIEKDQ 146
+ C + S LYL G ++V +F KA++ + D ++ ++ +++ E L ++E
Sbjct: 68 LRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEILMELEN-- 125
Query: 147 REYTLDEEDQKMQDAIL 163
E++LD ++++ D I+
Sbjct: 126 TEFSLDPAEKEIGDQII 142
>sp|D9HP23|CNR7_MAIZE Cell number regulator 7 OS=Zea mays GN=CNR7 PE=2 SV=1
Length = 180
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 282 SGRDLLSREGSYQHEEWHTDLLGCCSEPLLCMKTFFYPCGTFSKIATVATSRHMSSAEAC 341
+G + S + +W + L C + LC T + PC TF +IA V A +C
Sbjct: 24 TGIPISSPGPAVAASQWSSGLCACFDDCGLCCMTCWCPCVTFGRIAEVVD----RGATSC 79
Query: 342 NELMAYSLILSC-----C--CYTCCIRRKLRKTLNI 370
A +L+C C Y+C R K+R L +
Sbjct: 80 AAAGAIYTLLACFTGFQCHWIYSCTYRSKMRAQLGL 115
>sp|P57549|LON_BUCAI Lon protease OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=lon PE=3 SV=1
Length = 777
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 134 RVRERLE-DIEKDQREYTLDEEDQKMQDAILRREPSKHETMVLKKTL-STSYPKMGFNEV 191
R+R R++ +EK QREY L+E+ + +Q + + E +LK+ + S+ PK
Sbjct: 212 RIRHRVKKQMEKSQREYYLNEQIKAIQKELGDMDEIPDENKILKRKIKSSKMPK------ 265
Query: 192 LQKENEKLQLELQRSQTQMDVS-QCEVIQRLID 223
+ EK +LELQ+ + +S + V++ ID
Sbjct: 266 --EAREKTELELQKLKMMSPMSAEATVVRSYID 296
>sp|P35177|SPT7_YEAST Transcriptional activator SPT7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SPT7 PE=1 SV=1
Length = 1332
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 121 LKIVPLITLVDNARVRERLEDIEKDQREYTLDEEDQ 156
++++P IT+ + A + + +ED+EKD ++Y LDEE++
Sbjct: 543 IRMIPNITIRNRADLEKEIEDMEKD-KDYELDEEEE 577
>sp|Q9NZJ4|SACS_HUMAN Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2
Length = 4579
Score = 32.3 bits (72), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 57 EQLKISELKKYPETREPLEQLEDALRRS----YLLVNSCQDRSYLYL--LAMGWNIVYQF 110
E K+SE+ P + ++ L D LR + +N + S + N++Y
Sbjct: 2706 EMAKVSEISSVPASDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKSTGALNVLYSV 2765
Query: 111 RKAQTEIDRYLKIVPLITLVDNARVRERLEDIEKDQREYTLDEED 155
+ T+ DR + +++D+ + +L+DI Q YT+D ED
Sbjct: 2766 KGKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQITYTMDTED 2810
>sp|A3N062|ARGA_ACTP2 Amino-acid acetyltransferase OS=Actinobacillus pleuropneumoniae
serotype 5b (strain L20) GN=argA PE=3 SV=1
Length = 437
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 179 LSTSYPKMGF-NEVLQKENEKLQLELQRSQTQMDVSQCEVIQRLIDVTEAFSANHLPEEV 237
L+TS+ G N + E + + ++ R Q +M++S +I+R V + NH P+E
Sbjct: 293 LATSFDIPGLLNLIRPLEEQGILVKRSREQLEMEISNYTIIERDGIVIACAALNHYPQEK 352
Query: 238 SPKKSSKKVECNYSDTDNG 256
+ + V +Y D+ G
Sbjct: 353 MAEMACVAVHPDYRDSSRG 371
>sp|P24789|VIM1_XENLA Vimentin-1/2 OS=Xenopus laevis GN=vim1 PE=2 SV=1
Length = 458
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 112 KAQTEIDRYLKIVPLITLVDN-ARVRERLED--IEKDQREYTLDEEDQKMQDAILRREPS 168
KA+ E+DR L D+ R+RE+L+D I+K++ E L Q + +A L R
Sbjct: 161 KARVEVDR-------DNLADDLQRLREKLQDEMIQKEEAEGNLQSFRQDVDNASLAR--- 210
Query: 169 KHETMVLKKTLSTSYPKMGFNEVLQKEN-EKLQLELQRS--QTQMDVSQCEVIQRLIDVT 225
+ L++ + + ++ F + L E +LQL++Q S Q MDVS+ ++ L DV
Sbjct: 211 ----IDLERKVESLQEEIAFLKKLHDEEIRELQLQIQESHIQVDMDVSKPDLTAALRDVR 266
Query: 226 EAF 228
+ +
Sbjct: 267 QQY 269
>sp|B3GXD3|ARGA_ACTP7 Amino-acid acetyltransferase OS=Actinobacillus pleuropneumoniae
serotype 7 (strain AP76) GN=argA PE=3 SV=1
Length = 437
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 179 LSTSYPKMGF-NEVLQKENEKLQLELQRSQTQMDVSQCEVIQRLIDVTEAFSANHLPEEV 237
L+TS+ G N + E + + ++ R Q +M++S +I+R V + NH P+E
Sbjct: 293 LATSFDIPGLLNLIRPLEEQGILVKRSREQLEMEISNYTIIERDGIVIACAALNHYPQEK 352
Query: 238 SPKKSSKKVECNYSDTDNG 256
+ + V +Y D+ G
Sbjct: 353 MAEMACVAVHPDYRDSSRG 371
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,839,778
Number of Sequences: 539616
Number of extensions: 5562105
Number of successful extensions: 21064
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 20780
Number of HSP's gapped (non-prelim): 454
length of query: 409
length of database: 191,569,459
effective HSP length: 120
effective length of query: 289
effective length of database: 126,815,539
effective search space: 36649690771
effective search space used: 36649690771
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)