Query 015335
Match_columns 408
No_of_seqs 436 out of 2561
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 05:20:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015335.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015335hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2241 tRNA-binding protein [ 100.0 6.8E-58 1.5E-62 432.7 17.6 169 240-408 86-255 (255)
2 PLN02610 probable methionyl-tR 100.0 4.2E-42 9E-47 376.5 19.1 166 243-408 635-801 (801)
3 TIGR02222 chap_CsaA export-rel 100.0 7E-30 1.5E-34 216.5 9.7 104 246-350 2-107 (107)
4 cd02798 tRNA_bind_CsaA tRNA-bi 100.0 1E-29 2.3E-34 215.5 8.9 104 245-349 3-107 (107)
5 PRK10089 tRNA-binding protein; 100.0 1.5E-29 3.3E-34 216.2 9.4 106 244-350 5-112 (112)
6 cd02799 tRNA_bind_EMAP-II_like 99.9 2E-27 4.3E-32 200.7 12.0 104 247-350 2-105 (105)
7 TIGR00399 metG_C_term methiony 99.9 1.8E-26 3.9E-31 203.7 11.9 106 242-349 31-136 (137)
8 cd02800 tRNA_bind_EcMetRS_like 99.9 3.3E-26 7.1E-31 193.3 10.5 103 245-350 3-105 (105)
9 PF01588 tRNA_bind: Putative t 99.9 5.4E-26 1.2E-30 188.7 10.3 95 253-348 1-95 (95)
10 COG0073 ARC1 EMAP domain [Gene 99.9 7.1E-25 1.5E-29 190.3 11.0 109 241-349 9-123 (123)
11 cd02153 tRNA_bindingDomain The 99.9 3.4E-24 7.3E-29 178.8 11.6 97 253-349 1-99 (99)
12 PRK12267 methionyl-tRNA synthe 99.9 2.4E-22 5.2E-27 217.6 11.4 107 242-350 542-648 (648)
13 PRK00133 metG methionyl-tRNA s 99.9 3.6E-22 7.8E-27 217.1 9.6 107 241-350 566-673 (673)
14 cd02796 tRNA_bind_bactPheRS tR 99.8 1E-19 2.2E-24 152.9 9.4 89 253-349 1-103 (103)
15 TIGR00472 pheT_bact phenylalan 99.6 4.1E-16 8.9E-21 172.8 9.0 95 253-355 46-155 (798)
16 PRK00629 pheT phenylalanyl-tRN 99.6 1.7E-15 3.7E-20 167.7 9.1 94 253-355 45-153 (791)
17 PRK13972 GSH-dependent disulfi 99.5 7.6E-14 1.6E-18 130.8 11.3 126 21-150 42-208 (215)
18 KOG0867 Glutathione S-transfer 99.5 1.8E-13 3.9E-18 130.4 9.4 124 21-146 44-208 (226)
19 PLN02395 glutathione S-transfe 99.4 5.8E-13 1.3E-17 124.2 10.0 127 21-149 43-212 (215)
20 PRK10542 glutathionine S-trans 99.4 7.4E-13 1.6E-17 122.1 10.6 122 21-146 42-196 (201)
21 PRK09481 sspA stringent starva 99.4 4.6E-13 1E-17 125.4 9.1 123 21-146 49-201 (211)
22 PLN02473 glutathione S-transfe 99.4 1.3E-12 2.7E-17 122.0 9.0 124 21-146 44-210 (214)
23 PRK11752 putative S-transferas 99.4 3.1E-12 6.7E-17 124.5 10.6 124 21-146 91-257 (264)
24 TIGR01262 maiA maleylacetoacet 99.3 1.1E-11 2.3E-16 115.1 11.7 122 22-147 43-204 (210)
25 cd03188 GST_C_Beta GST_C famil 99.3 8.4E-12 1.8E-16 104.2 9.2 87 54-144 2-113 (114)
26 COG0625 Gst Glutathione S-tran 99.3 1.3E-11 2.8E-16 115.2 11.3 119 20-142 40-199 (211)
27 cd03187 GST_C_Phi GST_C family 99.3 8.7E-12 1.9E-16 104.9 8.8 89 54-144 2-117 (118)
28 cd03196 GST_C_5 GST_C family, 99.3 7.6E-12 1.7E-16 106.8 8.1 89 54-144 6-114 (115)
29 PLN02907 glutamate-tRNA ligase 99.3 1.7E-11 3.7E-16 134.1 12.5 128 10-140 10-159 (722)
30 cd03200 GST_C_JTV1 GST_C famil 99.2 2E-11 4.3E-16 101.3 7.8 78 54-138 17-96 (96)
31 cd03178 GST_C_Ure2p_like GST_C 99.2 2E-11 4.4E-16 102.2 7.8 89 54-145 1-112 (113)
32 cd03190 GST_C_ECM4_like GST_C 99.2 2.8E-11 6E-16 107.1 8.2 91 55-147 5-118 (142)
33 cd03177 GST_C_Delta_Epsilon GS 99.2 2.6E-11 5.6E-16 103.0 7.8 89 54-145 2-110 (118)
34 cd03180 GST_C_2 GST_C family, 99.2 4.7E-11 1E-15 99.0 8.7 84 54-141 2-110 (110)
35 PTZ00057 glutathione s-transfe 99.2 4.2E-11 9E-16 111.7 8.0 121 24-147 52-199 (205)
36 PRK10357 putative glutathione 99.2 6.6E-11 1.4E-15 109.4 8.9 122 22-146 40-199 (202)
37 cd03191 GST_C_Zeta GST_C famil 99.2 1.6E-10 3.4E-15 98.4 10.0 89 54-146 3-118 (121)
38 PRK15113 glutathione S-transfe 99.2 1.3E-10 2.7E-15 109.1 10.3 120 21-147 49-208 (214)
39 PLN02378 glutathione S-transfe 99.2 3.4E-11 7.4E-16 113.2 6.3 124 21-146 50-198 (213)
40 COG2517 Predicted RNA-binding 99.2 6.5E-11 1.4E-15 107.5 7.7 70 250-327 119-188 (219)
41 cd03181 GST_C_EFB1gamma GST_C 99.1 1.4E-10 3.1E-15 98.5 7.9 94 54-149 1-118 (123)
42 cd03185 GST_C_Tau GST_C family 99.1 1.2E-10 2.6E-15 99.4 7.4 92 54-147 3-115 (126)
43 cd03207 GST_C_8 GST_C family, 99.1 7.7E-11 1.7E-15 97.4 5.8 69 73-146 33-101 (103)
44 cd03186 GST_C_SspA GST_N famil 99.1 2.3E-10 4.9E-15 95.2 8.5 88 54-144 3-106 (107)
45 cd03189 GST_C_GTT1_like GST_C 99.1 1.7E-10 3.7E-15 97.6 7.3 83 53-139 6-119 (119)
46 cd03183 GST_C_Theta GST_C fami 99.1 2.6E-10 5.7E-15 97.6 7.9 71 74-147 49-122 (126)
47 cd03206 GST_C_7 GST_C family, 99.1 1.4E-10 2.9E-15 95.8 5.8 80 58-141 1-100 (100)
48 PF14497 GST_C_3: Glutathione 99.1 8.2E-11 1.8E-15 97.2 3.9 77 54-137 5-99 (99)
49 cd03182 GST_C_GTT2_like GST_C 99.1 3.1E-10 6.7E-15 95.5 7.5 84 54-140 4-116 (117)
50 PLN02817 glutathione dehydroge 99.1 4.9E-10 1.1E-14 109.4 9.9 124 21-146 103-250 (265)
51 cd03203 GST_C_Lambda GST_C fam 99.0 6.7E-10 1.5E-14 95.3 7.8 90 54-146 4-110 (120)
52 cd03179 GST_C_1 GST_C family, 99.0 1.5E-09 3.2E-14 89.4 7.9 78 54-135 2-104 (105)
53 PRK10387 glutaredoxin 2; Provi 99.0 1.5E-09 3.1E-14 100.8 8.2 99 37-141 60-207 (210)
54 TIGR02306 RNA_lig_DRB0094 RNA 98.9 1.5E-09 3.3E-14 109.2 7.4 66 253-329 3-96 (341)
55 PF00043 GST_C: Glutathione S- 98.9 3.2E-09 7E-14 86.0 5.9 64 73-139 31-95 (95)
56 cd03204 GST_C_GDAP1 GST_C fami 98.9 4.5E-09 9.8E-14 89.8 6.3 67 73-141 32-111 (111)
57 cd03198 GST_C_CLIC GST_C famil 98.9 6.9E-09 1.5E-13 91.6 7.5 72 73-146 32-123 (134)
58 TIGR00862 O-ClC intracellular 98.8 7.2E-09 1.6E-13 99.7 8.3 125 20-146 48-219 (236)
59 cd03209 GST_C_Mu GST_C family, 98.8 1.4E-08 3E-13 86.9 8.7 71 74-147 39-109 (121)
60 cd03184 GST_C_Omega GST_C fami 98.8 9E-09 2E-13 88.4 7.2 91 54-146 2-112 (124)
61 TIGR02182 GRXB Glutaredoxin, G 98.8 8.7E-09 1.9E-13 96.7 7.4 112 23-141 39-206 (209)
62 cd03195 GST_C_4 GST_C family, 98.8 2.4E-08 5.2E-13 84.9 8.2 86 54-146 3-112 (114)
63 cd03210 GST_C_Pi GST_C family, 98.8 2.6E-08 5.7E-13 85.9 8.3 71 74-147 39-112 (126)
64 cd03208 GST_C_Alpha GST_C fami 98.7 3.2E-08 6.9E-13 87.2 7.6 71 74-147 43-115 (137)
65 cd03201 GST_C_DHAR GST_C famil 98.6 5.3E-08 1.2E-12 84.1 6.3 72 73-146 33-109 (121)
66 PF13410 GST_C_2: Glutathione 98.6 5.8E-08 1.2E-12 74.6 4.9 60 73-134 9-69 (69)
67 cd00299 GST_C_family Glutathio 98.6 1.4E-07 3E-12 75.9 6.3 60 73-135 39-100 (100)
68 cd03202 GST_C_etherase_LigE GS 98.5 2E-07 4.4E-12 80.6 6.8 62 73-137 61-123 (124)
69 cd03193 GST_C_Metaxin GST_C fa 98.5 2.2E-07 4.7E-12 74.9 5.7 61 73-135 22-87 (88)
70 cd03192 GST_C_Sigma_like GST_C 98.4 3.4E-07 7.4E-12 75.5 5.2 60 73-135 42-104 (104)
71 cd03194 GST_C_3 GST_C family, 98.4 7E-07 1.5E-11 76.0 7.1 65 74-145 45-112 (114)
72 KOG1147 Glutamyl-tRNA syntheta 98.4 3.1E-07 6.7E-12 95.7 4.5 91 50-144 69-161 (712)
73 cd03205 GST_C_6 GST_C family, 98.3 7.8E-07 1.7E-11 73.2 4.8 58 73-135 40-98 (98)
74 KOG0868 Glutathione S-transfer 98.1 8.8E-06 1.9E-10 74.5 8.3 124 20-147 47-207 (217)
75 KOG0406 Glutathione S-transfer 98.1 8.9E-06 1.9E-10 77.8 8.7 124 22-147 49-211 (231)
76 KOG4420 Uncharacterized conser 98.1 1.3E-05 2.7E-10 77.3 9.5 73 74-148 209-288 (325)
77 cd03212 GST_C_Metaxin1_3 GST_C 98.1 3.3E-06 7.1E-11 74.7 4.9 82 55-138 45-135 (137)
78 cd03197 GST_C_mPGES2 GST_C fam 98.1 5.8E-06 1.3E-10 74.2 5.9 52 84-138 94-146 (149)
79 cd03211 GST_C_Metaxin2 GST_C f 98.0 6.7E-06 1.5E-10 71.5 4.2 61 73-135 60-125 (126)
80 KOG1695 Glutathione S-transfer 97.9 4.3E-05 9.2E-10 72.2 9.3 109 37-147 63-200 (206)
81 COG0435 ECM4 Predicted glutath 97.8 1.9E-05 4E-10 76.8 4.6 89 55-145 173-284 (324)
82 KOG2903 Predicted glutathione 97.3 0.00014 2.9E-09 70.4 2.3 88 55-144 171-285 (319)
83 KOG1422 Intracellular Cl- chan 95.7 0.014 3E-07 55.1 4.7 70 74-145 127-203 (221)
84 KOG3029 Glutathione S-transfer 94.4 0.17 3.8E-06 49.9 8.2 52 84-138 302-355 (370)
85 PHA02142 putative RNA ligase 94.3 0.097 2.1E-06 53.6 6.5 73 253-325 10-100 (366)
86 KOG1668 Elongation factor 1 be 93.2 0.049 1.1E-06 52.1 1.9 59 76-142 10-68 (231)
87 KOG4244 Failed axon connection 92.8 0.2 4.3E-06 49.1 5.5 63 74-138 207-273 (281)
88 KOG3027 Mitochondrial outer me 91.8 0.26 5.7E-06 46.6 4.8 64 73-138 180-248 (257)
89 PF04399 Glutaredoxin2_C: Glut 91.5 0.61 1.3E-05 41.2 6.6 62 73-141 62-124 (132)
90 KOG3028 Translocase of outer m 88.0 1.5 3.3E-05 43.9 6.9 62 75-138 168-234 (313)
91 PTZ00385 lysyl-tRNA synthetase 87.4 0.081 1.8E-06 58.1 -2.5 50 261-313 609-659 (659)
92 PF14834 GST_C_4: Glutathione 87.1 2.1 4.6E-05 37.0 6.4 65 73-145 46-112 (117)
93 cd03199 GST_C_GRX2 GST_C famil 86.0 2.3 5E-05 37.4 6.3 61 73-140 63-124 (128)
94 COG2999 GrxB Glutaredoxin 2 [P 62.7 26 0.00057 32.8 6.6 95 41-142 64-208 (215)
95 PF11801 Tom37_C: Tom37 C-term 53.0 21 0.00044 32.7 4.3 38 75-113 113-153 (168)
96 PRK10413 hydrogenase 2 accesso 44.0 72 0.0016 25.9 5.7 49 255-308 6-54 (82)
97 COG0093 RplN Ribosomal protein 37.4 2.8E+02 0.006 24.3 8.4 83 253-350 2-99 (122)
98 TIGR03673 rpl14p_arch 50S ribo 36.2 1.6E+02 0.0036 26.0 7.1 86 253-350 11-109 (131)
99 cd03048 GST_N_Ure2p_like GST_N 33.8 28 0.0006 26.9 1.8 14 38-51 67-80 (81)
100 PRK08571 rpl14p 50S ribosomal 30.2 2.4E+02 0.0053 25.0 7.2 86 253-350 12-110 (132)
101 COG0298 HypC Hydrogenase matur 26.4 1.9E+02 0.0042 23.5 5.3 43 256-307 7-49 (82)
102 cd03052 GST_N_GDAP1 GST_N fami 24.5 42 0.00092 25.7 1.3 18 11-28 10-27 (73)
103 TIGR00074 hypC_hupF hydrogenas 23.8 1.9E+02 0.0041 23.1 4.9 40 256-307 7-46 (76)
104 PF09635 MetRS-N: MetRS-N bind 22.7 1.6E+02 0.0035 25.7 4.7 69 37-111 49-122 (122)
105 PRK04313 30S ribosomal protein 22.2 1.9E+02 0.0041 28.2 5.5 35 254-289 188-223 (237)
106 cd03046 GST_N_GTT1_like GST_N 20.8 70 0.0015 23.9 1.9 14 37-50 62-75 (76)
107 PTZ00054 60S ribosomal protein 20.6 4.5E+02 0.0097 23.5 7.1 86 253-350 19-117 (139)
108 cd03050 GST_N_Theta GST_N fami 20.4 39 0.00086 25.6 0.4 11 38-48 64-74 (76)
No 1
>KOG2241 consensus tRNA-binding protein [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.8e-58 Score=432.69 Aligned_cols=169 Identities=53% Similarity=0.849 Sum_probs=164.4
Q ss_pred cccccccCccccceEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccc
Q 015335 240 VDKDKELSVSLLNIQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMS 319 (408)
Q Consensus 240 ~~~~~~~~~~~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S 319 (408)
++.+..+++++||||||+|+++++||++|+||+++||+|+.++|||||||++|+++|+|+||+|+|+|||||+|||||+|
T Consensus 86 ~~~~~~p~~~~LDiRvG~Ivka~kHpdADsLYve~IdvgE~~PRTVvSGLvk~vpleemq~R~VvvlcNLKPakmRgv~S 165 (255)
T KOG2241|consen 86 PMMEAGPDVSLLDIRVGKIVKAGKHPDADSLYVEEIDVGEAEPRTVVSGLVKHVPLEEMQNRLVVVLCNLKPAKMRGVKS 165 (255)
T ss_pred CcccCCCCcceeeEEEeEEEEecccCCcceeEEEEeeecccccceeehhhHhhCCHHHHhCCeEEEEecccccccccccc
Confidence 45566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCCCceEEecCCCCCCCCceEEEcCCCCCCCccCCcchhhHhhhCCCeeECCCeEEEECCeeeeeCCCCee
Q 015335 320 EGLVLCASNEDHTNVEPLLPPEGAKIGERISFSGIDGKPEEVLNPKKKQLEKITPNLFTDDKGVATFKGIPFMTSAGPCT 399 (408)
Q Consensus 320 ~gMvLca~~~~~~~v~ll~pp~~~~~G~~v~~~g~~~~p~~~l~~kkk~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~ 399 (408)
+|||||++++|+..||+|.||.++.+|+||+|+||+++|+++||||||+||.|||+|+|+++|+++|||.+|+|+.|.|+
T Consensus 166 ~gMvlcaSs~d~~~VE~l~pP~gs~pGdRv~fegfegePd~~LnPKKKiwE~iqpdl~t~~~~va~yKg~~~~~~~G~~~ 245 (255)
T KOG2241|consen 166 QGMVLCASSPDKSVVEPLAPPAGSKPGDRVTFEGFEGEPDKELNPKKKIWEKIQPDLKTNEEGVATYKGAPFETKKGVCT 245 (255)
T ss_pred ceeEEecCCcccceeeeccCCCCCCCCCeeeecCCCCCcchhcChhhhhHHHhCCCcccccceEEEecCCceeccCceEE
Confidence 99999999999888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred e-ecCCcccC
Q 015335 400 S-SIPKASIK 408 (408)
Q Consensus 400 ~-~~~~~~vk 408 (408)
+ +|.||+||
T Consensus 246 a~ti~n~~Ik 255 (255)
T KOG2241|consen 246 AQTISNGGIK 255 (255)
T ss_pred EeeccCCCCC
Confidence 8 89999997
No 2
>PLN02610 probable methionyl-tRNA synthetase
Probab=100.00 E-value=4.2e-42 Score=376.51 Aligned_cols=166 Identities=52% Similarity=0.865 Sum_probs=159.5
Q ss_pred ccccCccccceEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccce
Q 015335 243 DKELSVSLLNIQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEGL 322 (408)
Q Consensus 243 ~~~~~~~~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~gM 322 (408)
..+.+|+++|||||+|++|++||++|+||+++||+|++++||||||++++|++|+|+|++|+|++||+|++||||.|+||
T Consensus 635 ~~~~~~~~~dlrVg~I~~~~~hp~adkL~~~~Vd~G~~~~r~ivsG~~~~~~~e~l~G~~Vvv~~nlkp~klrGv~S~GM 714 (801)
T PLN02610 635 EREIDVSRLDIRVGLIVKAEKHPDADSLYVEEIDVGEGAPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPAAMRGIKSQAM 714 (801)
T ss_pred cccccceeeeeEEEEEEEEEeecCCCcceEEEEEeCCCceEEEEeCccccCChHHhCCCEEEEEEEecccccCCccccee
Confidence 45678999999999999999999999999999999987899999999999999999999999999999999999999999
Q ss_pred eeeccCCCCCceEEecCCCCCCCCceEEEcCCCCCCCccCCcchhhHhhhCCCeeECCCeEEEECCeeeeeCCCCeee-e
Q 015335 323 VLCASNEDHTNVEPLLPPEGAKIGERISFSGIDGKPEEVLNPKKKQLEKITPNLFTDDKGVATFKGIPFMTSAGPCTS-S 401 (408)
Q Consensus 323 vLca~~~~~~~v~ll~pp~~~~~G~~v~~~g~~~~p~~~l~~kkk~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~-~ 401 (408)
|||++++++.+++|+.||+++++|+||+|+|++++|+++++||+|+|+.||++|+|+++|+++|+|.+|+|++|+|++ +
T Consensus 715 ll~a~~~~~~~~~ll~~~~~~~~G~~v~~~~~~~~p~~~~~~k~k~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 794 (801)
T PLN02610 715 VLAASNSDHTKVELVEPPESAAVGERVTFPGFEGEPDDVLNPKKKVWETLQPDLHTNSELVACYKDVPFTTSAGVCKVAS 794 (801)
T ss_pred EEecccCCCCceEEEeCCCCCCCCCEEEeCCCCCCcccccCcccchHHHhCCCCEECCceEEEECCEEEEecCCCeEccc
Confidence 999987766679999999999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred cCCcccC
Q 015335 402 IPKASIK 408 (408)
Q Consensus 402 ~~~~~vk 408 (408)
|+||+|+
T Consensus 795 ~~~~~i~ 801 (801)
T PLN02610 795 IANGSIR 801 (801)
T ss_pred CCCCEeC
Confidence 9999996
No 3
>TIGR02222 chap_CsaA export-related chaperone CsaA. This model describes Bacillus subtilis CsaA, an export-related chaperone that interacts with the Sec system, and related proteins from a number of other bacteria and archaea. The crystal structure is known for the homodimer from Thermus thermophilus.
Probab=99.96 E-value=7e-30 Score=216.49 Aligned_cols=104 Identities=27% Similarity=0.379 Sum_probs=96.8
Q ss_pred cCccccceEEEEEEEEEeCCCCCc-eEEEEEEccCC-eeEEEEeCCCCCCCchhcCCCEEEEEeecccccccccccccee
Q 015335 246 LSVSLLNIQVGLIRKSWKHPSADS-LLVEEIDVGEA-KLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEGLV 323 (408)
Q Consensus 246 ~~~~~ldirVG~I~~~~~hp~adk-L~v~~Vd~G~~-~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~gMv 323 (408)
.+|.++|+|||+|+++++||++++ ||+++||+|.+ ++|||+||++.||++++|+|++|+++|||+|++|||+.|+|||
T Consensus 2 ~~f~kldlrvg~I~~~~~~p~a~k~L~~l~vd~G~~~~~r~ivsgi~~~~~~e~L~gk~v~~v~Nl~p~k~~G~~S~gMi 81 (107)
T TIGR02222 2 EDFEKLDLRVGRIVRAEPFPEARKPAYKLWVDFGTEIGVKQSSAQITKLYKPEDLIGRLVVAVVNFPPKQIAGFLSEVLV 81 (107)
T ss_pred chhhhhhheeEEEEEEeecCCcccceeEEEEEecCcCCcceEehhhhhhCCHHHhCCCeEEEEECCCCceeCCccccEEE
Confidence 468899999999999999999998 99999999964 4799999999999999999999999999999999999999999
Q ss_pred eeccCCCCCceEEecCCCCCCCCceEE
Q 015335 324 LCASNEDHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 324 Lca~~~~~~~v~ll~pp~~~~~G~~v~ 350 (408)
||+.++++ .+.|+.|+.++++|+||+
T Consensus 82 l~~~~~~~-~~~l~~~~~~~~~G~~v~ 107 (107)
T TIGR02222 82 LGVIDEQG-RVVLLQPDRPVPNGTKIA 107 (107)
T ss_pred EEEECCCC-eEEEecCCCCCCCcCCcC
Confidence 99986543 588999999999999985
No 4
>cd02798 tRNA_bind_CsaA tRNA-binding-domain-containing CsaA-like proteins. CsaA is a molecular chaperone with export related activities. CsaA has a putative tRNA binding activity. The functional unit of CsaA is a homodimer and this domain acts as a dimerization domain.
Probab=99.96 E-value=1e-29 Score=215.49 Aligned_cols=104 Identities=28% Similarity=0.452 Sum_probs=97.6
Q ss_pred ccCccccceEEEEEEEEEeCCCC-CceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeecccccccccccccee
Q 015335 245 ELSVSLLNIQVGLIRKSWKHPSA-DSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEGLV 323 (408)
Q Consensus 245 ~~~~~~ldirVG~I~~~~~hp~a-dkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~gMv 323 (408)
+.+|..+|+|||+|+++++||++ ++||+++||+|.+++|||+||+++||++++|+|++|++++||+|++|||+.|+|||
T Consensus 3 ~~~f~kldi~vG~V~~~~~~p~a~~kL~~~~Vd~G~~~~r~ivsg~~~~~~~e~l~gk~v~~v~Nlkp~k~~G~~S~gm~ 82 (107)
T cd02798 3 YEDFEKVDLRVGTIVEVEDFPEARKPAYKLKVDFGEIGVKQSSAQITKYYKPEELIGRQVVAVVNFPPKQIAGVLSEVLV 82 (107)
T ss_pred HHHceeeeeEEEEEEEEEECCCcccceEEEEEEecCccceehhhhhhhcCCHHHhcCCcEEEEeCCCCceecceeccEEE
Confidence 45799999999999999999999 99999999999877999999999999999999999999999999999999999999
Q ss_pred eeccCCCCCceEEecCCCCCCCCceE
Q 015335 324 LCASNEDHTNVEPLLPPEGAKIGERI 349 (408)
Q Consensus 324 Lca~~~~~~~v~ll~pp~~~~~G~~v 349 (408)
||+++++ +.++++.||.++++|+||
T Consensus 83 l~~~~~~-~~~~~~~~~~~~~~G~~i 107 (107)
T cd02798 83 LGADDEG-GEVVLLVPDREVPNGAKV 107 (107)
T ss_pred EEEEcCC-CcEEEecCCCCCCCcCCC
Confidence 9987653 468899999999999986
No 5
>PRK10089 tRNA-binding protein; Provisional
Probab=99.96 E-value=1.5e-29 Score=216.18 Aligned_cols=106 Identities=26% Similarity=0.351 Sum_probs=99.1
Q ss_pred cccCccccceEEEEEEEEEeCCCCCce-EEEEEEccCC-eeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccc
Q 015335 244 KELSVSLLNIQVGLIRKSWKHPSADSL-LVEEIDVGEA-KLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEG 321 (408)
Q Consensus 244 ~~~~~~~ldirVG~I~~~~~hp~adkL-~v~~Vd~G~~-~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~g 321 (408)
+..+|.++|+|||+|+++++||++++| |+++||+|.+ +.|||+||++.||++++|+|++|+++|||||++|||+.|+|
T Consensus 5 ~~~~f~kldlrvg~I~~~~~~p~a~kL~~~l~vd~G~~~~~r~i~sgl~~~~~~eel~gk~v~~v~Nlkp~~~~G~~S~g 84 (112)
T PRK10089 5 TYEDFEKVDIRVGTIVEAEPFPEARKPAYKLWIDFGEEIGVKQSSAQITPHYTPEELIGKQVVAVVNFPPKQIAGFMSEV 84 (112)
T ss_pred CHhHhhhhheeeEEEEEEEEcCCcCcceEEEEEEecCccCcceEehhhcccCCHHHHccCcEEEEECCCcceecCccccE
Confidence 456799999999999999999999999 9999999986 58999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCCceEEecCCCCCCCCceEE
Q 015335 322 LVLCASNEDHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 322 MvLca~~~~~~~v~ll~pp~~~~~G~~v~ 350 (408)
||||++++++ .++++.||.++++|+||+
T Consensus 85 mil~~~~~~~-~~~l~~p~~~~~~G~~i~ 112 (112)
T PRK10089 85 LVLGFEDEDG-EVVLLTPDRPVPNGVKLV 112 (112)
T ss_pred EEEEEEcCCC-eEEEecCCCCCCCcCCcC
Confidence 9999987664 588999999999999984
No 6
>cd02799 tRNA_bind_EMAP-II_like tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae Arc1p, human p43 and EMAP2. CeMetRS and hTyrRS aminoacylate their cognate tRNAs. Arc1p is a transactivator of yeast methionyl-tRNA and glutamyl-tRNA synthetases. This domain has general tRNA binding properties. In a subset of this family this domain has the added capability of a cytokine. For example the p43 component of the Human aminoacyl-tRNA synthetase complex is cleaved to release EMAP-II cytokine. EMAP-II has multiple activities during apoptosis, angiogenesis and inflammation and participates in malignant transformation. A EMAP-II-like cytokine also is released from hTyrRS upon cleavage. The active cytokine heptapeptide locates to this domain.
Probab=99.95 E-value=2e-27 Score=200.73 Aligned_cols=104 Identities=56% Similarity=0.849 Sum_probs=97.6
Q ss_pred CccccceEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccceeeec
Q 015335 247 SVSLLNIQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEGLVLCA 326 (408)
Q Consensus 247 ~~~~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~gMvLca 326 (408)
+|.++|+|||+|+++++||++++||+++||+|.+++|||+||+.++|++++++|++|++++||+|++|||+.|+||+||+
T Consensus 2 ~f~~~~i~vg~I~~~~~~p~s~kL~~l~Vd~G~~~~~~Ivsg~~~~~~~~~~~g~~v~~l~nl~~~~~~G~~S~GMll~~ 81 (105)
T cd02799 2 DPSRLDIRVGKILKVRKHPDADSLYVEEIDLGEEEPRTIVSGLVKFVPLEQMQNRLVVVLCNLKPRKMRGVKSQGMVLCA 81 (105)
T ss_pred CceEEEEEEEEEEEEEecCCCCccEEEEEEeCCCcEEEEEcCccccCCHHHhCCCEEEEEEeeccceECCeeeceEEEEe
Confidence 58899999999999999999999999999999778999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceEEecCCCCCCCCceEE
Q 015335 327 SNEDHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 327 ~~~~~~~v~ll~pp~~~~~G~~v~ 350 (408)
++++...+.++.||.++++|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~G~~i~ 105 (105)
T cd02799 82 SNADHEKVELLEPPEGAKPGERVT 105 (105)
T ss_pred ccCCCCcEEEEECCCCCCCCCEeC
Confidence 876544578999999999999984
No 7
>TIGR00399 metG_C_term methionyl-tRNA synthetase C-terminal region/beta chain. The methionyl-tRNA synthetase (metG) is a class I amino acyl-tRNA ligase. This model describes a region of the methionyl-tRNA synthetase that is present at the C-terminus of MetG in some species (E. coli, B. subtilis, Thermotoga maritima, Methanobacterium thermoautotrophicum), and as a separate beta chain in Aquifex aeolicus. It is absent in a number of other species (e.g. Mycoplasma genitalium, Mycobacterium tuberculosis), while Pyrococcus horikoshii has both a full length MetG and a second protein homologous to the beta chain only. Proteins hit by this model should called methionyl-tRNA synthetase beta chain if and only if the model metG hits a separate protein not also hit by this model.
Probab=99.94 E-value=1.8e-26 Score=203.69 Aligned_cols=106 Identities=35% Similarity=0.550 Sum_probs=98.1
Q ss_pred cccccCccccceEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccc
Q 015335 242 KDKELSVSLLNIQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEG 321 (408)
Q Consensus 242 ~~~~~~~~~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~g 321 (408)
..+..+|+.+|+|||+|+++++||++++||+++||+|.+ .||||||+.+||.++.+.|++|++++||+|++|||+.|+|
T Consensus 31 ~~~~~~f~kldi~Vg~I~eve~hp~adkL~v~~Vd~G~~-~~qIvsg~~~~~~~~~l~G~~v~~~~nlkp~k~~Gv~S~G 109 (137)
T TIGR00399 31 TITIDDFEKVDLRVGKILKAERVEKSDKLLKLKLDLGDE-KRQIVSGIAGYYTPEELVGKKVIVVANLKPAKLFGVKSEG 109 (137)
T ss_pred ccCHhhceeeeeEEEEEEEEeecCCCCcceEEEEEeCCc-eEEEEeCcccCcCHhHcCCCEEEeeEEecCccCCCeEecc
Confidence 345678999999999999999999999999999999975 6999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCCceEEecCCCCCCCCceE
Q 015335 322 LVLCASNEDHTNVEPLLPPEGAKIGERI 349 (408)
Q Consensus 322 MvLca~~~~~~~v~ll~pp~~~~~G~~v 349 (408)
||||+.++++ .++|+.||.++++|+||
T Consensus 110 Mlls~~~~~~-~~~l~~~~~~~~~G~~i 136 (137)
T TIGR00399 110 MILAAEDDGK-VLFLLSPDQEAIAGERI 136 (137)
T ss_pred EEEEEecCCC-eEEEecCCCCCCCcCCc
Confidence 9888776654 68899999999999997
No 8
>cd02800 tRNA_bind_EcMetRS_like tRNA-binding-domain-containing Escherichia coli methionyl-tRNA synthetase (EcMetRS)-like proteins. This family includes EcMetRS and Aquifex aeolicus Trbp111 (AaTrbp111). This domain has general tRNA binding properties. MetRS aminoacylates methionine transfer RNAs (tRNAmet). AaTrbp111 is structure-specific molecular chaperone recognizing the L-shape of the tRNA fold. AaTrbp111 plays a role in nuclear trafficking of tRNAs. The functional unit of EcMetRs and AaTrbp111 is a homodimer, this domain acts as the dimerization domain.
Probab=99.93 E-value=3.3e-26 Score=193.26 Aligned_cols=103 Identities=34% Similarity=0.598 Sum_probs=95.6
Q ss_pred ccCccccceEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccceee
Q 015335 245 ELSVSLLNIQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEGLVL 324 (408)
Q Consensus 245 ~~~~~~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~gMvL 324 (408)
..+|..+|+|||+|+++++||++++||+++||+|. ++|+|+||+.++|.++++.|++|++++||+|++|||+.|+||+|
T Consensus 3 ~~~~~~ldi~vg~I~~~~~~p~a~kL~~~~vd~G~-~~~~iv~g~~~~~~~~~l~g~~v~~~~nl~~~~~~Gv~S~GMl~ 81 (105)
T cd02800 3 IDDFAKVDLRVGKVLEAERVEGSDKLLKLTVDLGE-EERQIVSGIAKFYPPEELVGKKVVVVANLKPRKLRGVESQGMIL 81 (105)
T ss_pred hHHceeeeEEEEEEEEEEecCCCCcceEEEEEeCC-eEEEEEeCcccccCHhHhccCceEeEeeECCccCCCeEeceEEE
Confidence 34688899999999999999999999999999998 79999999999999999999999999999999999999999987
Q ss_pred eccCCCCCceEEecCCCCCCCCceEE
Q 015335 325 CASNEDHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 325 ca~~~~~~~v~ll~pp~~~~~G~~v~ 350 (408)
|+.++ ..++|+.||.++++|+||.
T Consensus 82 s~~~~--~~~~l~~~~~~~~~G~~i~ 105 (105)
T cd02800 82 AAEDG--GKLKLLTPDEEVEPGSRVS 105 (105)
T ss_pred EecCC--CeEEEEeCCCCCCCcCCcC
Confidence 77655 4688999999999999973
No 9
>PF01588 tRNA_bind: Putative tRNA binding domain; InterPro: IPR002547 This domain is found in prokaryotic methionyl-tRNA synthetases, prokaryotic phenylalanyl tRNA synthetases the yeast GU4 nucleic-binding protein (G4p1 or p42, ARC1) [], human tyrosyl-tRNA synthetase [], and endothelial-monocyte activating polypeptide II. G4p1 binds specifically to tRNA form a complex with methionyl-tRNA synthetases []. In human tyrosyl-tRNA synthetase this domain may direct tRNA to the active site of the enzyme []. This domain may perform a common function in tRNA aminoacylation [].; GO: 0000049 tRNA binding; PDB: 3BU2_C 1PYB_A 2Q2I_A 2Q2H_A 1JJC_B 1EIY_B 1PYS_B 3HFZ_B 3TEH_B 2CWP_A ....
Probab=99.93 E-value=5.4e-26 Score=188.69 Aligned_cols=95 Identities=40% Similarity=0.637 Sum_probs=85.5
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccceeeeccCCCCC
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEGLVLCASNEDHT 332 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~gMvLca~~~~~~ 332 (408)
||||+|++|++||++|+||+++||+|+++ |||+||+.++|.++++.|+.+++++|++|++|+|+.|+||+||+...+..
T Consensus 1 i~vg~I~~~~~hp~sdkL~~~~Vd~G~~~-~~Ivsg~~n~~~~~~lv~~~~~~v~n~~~~~i~Gv~SeGMlls~~e~~~~ 79 (95)
T PF01588_consen 1 IRVGKILEVEPHPNSDKLYVLKVDIGEEE-RQIVSGAKNVYEPEVLVGKKVVVVANLKPRKIRGVESEGMLLSASELGDG 79 (95)
T ss_dssp EEEEEEEEEEEETTSSSEEEEEEESSSSE-EEEEESCTTTSTHHHHTTTEEEEETTSCBEEETTEEEESEE-EEECSTSS
T ss_pred CEEEEEEEEEECCCCCEEEEEEEEeCCce-EEEEeccccccChhhhcceeEEEEEccCCcEEEeccCCEEEEEeeccCCC
Confidence 69999999999999999999999999976 99999999999999999999999999999999999999997666642344
Q ss_pred ceEEecCCCCCCCCce
Q 015335 333 NVEPLLPPEGAKIGER 348 (408)
Q Consensus 333 ~v~ll~pp~~~~~G~~ 348 (408)
...++.+|+++|+|+|
T Consensus 80 ~~~ll~~~~~~~~G~~ 95 (95)
T PF01588_consen 80 SVGLLVLPDDAPPGED 95 (95)
T ss_dssp EEEEEEESSTS-TTSB
T ss_pred CEEEEECCCCCCCCCC
Confidence 6778999999999986
No 10
>COG0073 ARC1 EMAP domain [General function prediction only]
Probab=99.92 E-value=7.1e-25 Score=190.32 Aligned_cols=109 Identities=32% Similarity=0.522 Sum_probs=95.5
Q ss_pred ccccccCccccceEEEEEEEEEeCCCCCceEEEEEEccCC-eeEEEEeCCCCCCCchhcCCCEEEEEee---cccccccc
Q 015335 241 DKDKELSVSLLNIQVGLIRKSWKHPSADSLLVEEIDVGEA-KLRQVVSGLAKYCNPDDLTNRRVALITN---VKPGKLRD 316 (408)
Q Consensus 241 ~~~~~~~~~~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~-~~r~IvsGl~~~~~~~~l~g~~V~v~~n---lkp~k~rG 316 (408)
+.....+|...+||||+|+++++||+|||||+|+||+|++ ++|||+||+.+||+.+.+.++++.+++| |+|++|||
T Consensus 9 e~i~~~~~~~~~l~vg~V~~~~~~p~adkL~~~~Vd~G~~~~~~qiv~G~~n~~~~~~vv~a~v~~v~~~~~ikp~klrG 88 (123)
T COG0073 9 EEIEIDDFAKVDLRVGKVVEAEPHPNADKLLVLKVDLGDEKEPRQIVCGAPNFYAGEKLVGAKVGAVLNGGKLKPAKLRG 88 (123)
T ss_pred ccccccccccCCeEEEEEEEeEECCCCCeeEEEEEEcCCCCcEEEEEcCCccccCCceeeeeeEEEEeCCCcccceeecC
Confidence 3456778999999999999999999999999999999985 4999999999999999999999999999 99999999
Q ss_pred ccccceeeeccCCCCC--ceEEecCCCCCCCCceE
Q 015335 317 VMSEGLVLCASNEDHT--NVEPLLPPEGAKIGERI 349 (408)
Q Consensus 317 v~S~gMvLca~~~~~~--~v~ll~pp~~~~~G~~v 349 (408)
+.|+|||||+...+-. ...|+.+|+++++|+++
T Consensus 89 ~~S~GMics~~e~~~~~~~~~il~~~~~~~~g~~~ 123 (123)
T COG0073 89 VESEGMLLSAEELGLSDENVGILTLDEGVPPGTKV 123 (123)
T ss_pred cccceEEEEcccCCCccccceEEeCCCCCCCCCCC
Confidence 9999996665544311 24578999999999864
No 11
>cd02153 tRNA_bindingDomain The tRNA binding domain is also known as the Myf domain in literature. This domain is found in a diverse collection of tRNA binding proteins, including prokaryotic phenylalanyl tRNA synthetases (PheRS), methionyl-tRNA synthetases (MetRS), human tyrosyl-tRNA synthetase(hTyrRS), Saccharomyces cerevisiae Arc1p, Thermus thermophilus CsaA, Aquifex aeolicus Trbp111, human p43 and human EMAP-II. PheRS, MetRS and hTyrRS aminoacylate their cognate tRNAs. Arc1p is a transactivator of yeast methionyl-tRNA and glutamyl-tRNA synthetases. The molecular chaperones Trbp111 and CsaA also contain this domain. CsaA has export related activities; Trbp111 is structure-specific recognizing the L-shape of the tRNA fold. This domain has general tRNA binding properties. In a subset of this family this domain has the added capability of a cytokine. For example the p43 component of the Human aminoacyl-tRNA synthetase complex is cleaved to release EMAP-II cytokine. EMAP-II has multi
Probab=99.91 E-value=3.4e-24 Score=178.81 Aligned_cols=97 Identities=43% Similarity=0.669 Sum_probs=87.1
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccceeeeccCCC--
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEGLVLCASNED-- 330 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~gMvLca~~~~-- 330 (408)
||||+|+++++||++++||+++||+|.++.|+|+||+.++|++++++|++|++++||+|++|||+.|+||+||+...+
T Consensus 1 ~~vg~I~~~~~~p~~~kL~~~~vd~G~~~~~~ivsg~~~~~~~~~~~g~~v~~~~~l~~~~~~g~~S~GMl~s~~~~g~~ 80 (99)
T cd02153 1 LRVGKIVEAEPHPNADKLYVLKVDIGEEKPRQIVSGAANVYPPEELVGKKVVVAVNLKPKKLRGVESEGMLLSAEELGLE 80 (99)
T ss_pred CEEEEEEEEEECCCCCCCEEEEEEeCCCcEEEEEeCCcccCChHHhCCCEEEEEEecccccCCCeecccEEeeccccCCC
Confidence 589999999999999999999999998779999999999999999999999999999999999999999976655431
Q ss_pred CCceEEecCCCCCCCCceE
Q 015335 331 HTNVEPLLPPEGAKIGERI 349 (408)
Q Consensus 331 ~~~v~ll~pp~~~~~G~~v 349 (408)
.....++.+|.++++|++|
T Consensus 81 ~~~~~i~~~~~~~~~G~~~ 99 (99)
T cd02153 81 EGSVGILELPEDAPVGDRI 99 (99)
T ss_pred CCceEEEECCCCCCCCCcC
Confidence 2245678999999999985
No 12
>PRK12267 methionyl-tRNA synthetase; Reviewed
Probab=99.87 E-value=2.4e-22 Score=217.64 Aligned_cols=107 Identities=27% Similarity=0.472 Sum_probs=97.7
Q ss_pred cccccCccccceEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccc
Q 015335 242 KDKELSVSLLNIQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEG 321 (408)
Q Consensus 242 ~~~~~~~~~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~g 321 (408)
..++.+|+++|||||+|++|++||++|+||+++||+|++++||||||+.++|.++++.|++|++++||+|++||||.|+|
T Consensus 542 ~~~~~~f~~~d~~vg~i~~~~~~p~adkL~~~~vd~G~~~~~~iv~g~~~~~~~~~l~g~~v~~~~nl~~~~~~Gv~S~g 621 (648)
T PRK12267 542 EITIDDFDKVELRVAEVLEAEKVEKSDKLLKLQVDLGEEEPRQIVSGIAKFYPPEELVGKKVVVVANLKPAKLMGEESQG 621 (648)
T ss_pred ccCHhhhhhhceeEEEEEeeccCCCCCccceEEEEeCCCceEEEEeCCcccCCHhHhCCCeEEEEEeecccccCCcccce
Confidence 45678899999999999999999999999999999997778999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCCceEEecCCCCCCCCceEE
Q 015335 322 LVLCASNEDHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 322 MvLca~~~~~~~v~ll~pp~~~~~G~~v~ 350 (408)
||||+..++ .+.|+.||+++++|++|.
T Consensus 622 Ml~s~~~~~--~~~l~~~~~~~~~G~~~~ 648 (648)
T PRK12267 622 MILAAEDDG--KLTLLTVDKEVPNGSKVK 648 (648)
T ss_pred EEEEeccCC--eEEEEeCCCCCCCcCCCC
Confidence 987776532 366899999999999873
No 13
>PRK00133 metG methionyl-tRNA synthetase; Reviewed
Probab=99.86 E-value=3.6e-22 Score=217.11 Aligned_cols=107 Identities=34% Similarity=0.474 Sum_probs=97.4
Q ss_pred ccccccCccccceEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeecccccc-ccccc
Q 015335 241 DKDKELSVSLLNIQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKL-RDVMS 319 (408)
Q Consensus 241 ~~~~~~~~~~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~-rGv~S 319 (408)
+....++|.++|||||+|++|++||++++||+++||+|++ +||||||+.++|.++++.|++|++++||+|++| ||| |
T Consensus 566 ~~~~~~~f~~~di~vg~I~~~~~~p~~~~l~~~~vd~G~~-~~~iv~g~~~~~~~~~l~G~~v~~~~nlkp~~~~~Gv-S 643 (673)
T PRK00133 566 ETISFDDFAKVDLRVAKIVEAEKVEGADKLLKLTLDLGEE-TRQVFSGIKSAYDPEELVGKLVVMVANLAPRKMKFGV-S 643 (673)
T ss_pred cccCHHHHhhhhcceeeeEeeecCCCCCccceeeEecCCc-eeEEEcCccccCCHHHHhcCeeEEEEeeccccccCCc-c
Confidence 4466788999999999999999999999999999999985 899999999999999999999999999999999 999 9
Q ss_pred cceeeeccCCCCCceEEecCCCCCCCCceEE
Q 015335 320 EGLVLCASNEDHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 320 ~gMvLca~~~~~~~v~ll~pp~~~~~G~~v~ 350 (408)
+|||||+.++ +++|.++.++.++++|++|.
T Consensus 644 ~gMl~~~~~~-~~~i~~l~~~~~~~~G~~~~ 673 (673)
T PRK00133 644 EGMVLAAGPG-GGDLFLLEPDEGAKPGMRVK 673 (673)
T ss_pred ceeEEEeecC-CCcEEEecCCCCCCCCCcCC
Confidence 9998777643 34788888888999999873
No 14
>cd02796 tRNA_bind_bactPheRS tRNA-binding-domain-containing prokaryotic phenylalanly tRNA synthetase (PheRS) beta chain. PheRS aminoacylate phenylalanine transfer RNAs (tRNAphe). PheRSs belong structurally to class II aminoacyl tRNA synthetases (aaRSs) but, as they aminoacylate the 2'OH of the terminal ribose of tRNA they belong functionally to class 1 aaRSs. This domain has general tRNA binding properties and is believed to direct tRNAphe to the active site of the enzyme.
Probab=99.81 E-value=1e-19 Score=152.89 Aligned_cols=89 Identities=38% Similarity=0.593 Sum_probs=77.8
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEe---------ecccccccccccccee
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALIT---------NVKPGKLRDVMSEGLV 323 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~---------nlkp~k~rGv~S~gMv 323 (408)
|+||+|+++++||++++||+++||+|.++.|||+||+ .+...|++|++++ ||++++|||+.|+||
T Consensus 1 ~~vg~I~~~~~hp~~~kL~~~~vd~g~~~~~~Iv~~~-----~n~~~g~~vvv~~~gs~l~~~~~i~~~~~~G~~S~GM- 74 (103)
T cd02796 1 VVVGKVLEVEPHPNADKLNVCKVDIGENKPLQIVCGA-----PNVRAGDKVVVALPGAVLPGGLKIKKRKLRGVESEGM- 74 (103)
T ss_pred CEEEEEEEEEecCCCCceEEEEEEeCCCcEEEEEcCc-----cHhhcCCEEEEEecCCCcCCCceEcceeeCCcccchh-
Confidence 5899999999999999999999999987799999999 5558999999998 999999999999999
Q ss_pred eeccCC-----CCCceEEecCCCCCCCCceE
Q 015335 324 LCASNE-----DHTNVEPLLPPEGAKIGERI 349 (408)
Q Consensus 324 Lca~~~-----~~~~v~ll~pp~~~~~G~~v 349 (408)
||+..+ ++.+ ++.+|+++++|+++
T Consensus 75 l~s~~elg~~~~~~g--i~~l~~~~~~G~~~ 103 (103)
T cd02796 75 LCSAKELGLGEDSDG--IIELPEDAPVGTDI 103 (103)
T ss_pred CcchhHcCCCCCCCe--EEECCCCCCCCCCC
Confidence 566543 2334 58889999999864
No 15
>TIGR00472 pheT_bact phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial. Every known example of the phenylalanyl-tRNA synthetase, except the monomeric form of mitochondrial, is an alpha 2 beta 2 heterotetramer. The beta subunits break into two subfamilies that are considerably different in sequence, length, and pattern of gaps. This model represents the subfamily that includes the beta subunit from Bacteria other than spirochetes, as well as a chloroplast-encoded form from Porphyra purpurea. The chloroplast-derived sequence is considerably shorter at the amino end, however.
Probab=99.63 E-value=4.1e-16 Score=172.76 Aligned_cols=95 Identities=36% Similarity=0.647 Sum_probs=83.6
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEE---------eecccccccccccccee
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALI---------TNVKPGKLRDVMSEGLV 323 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~---------~nlkp~k~rGv~S~gMv 323 (408)
++||+|++|++||++|+|++|+||+|+++++|||||+ +|...|++|+|+ .+|++++|||+.|+||
T Consensus 46 ~~vg~i~~~~~hp~~~~L~~~~vd~g~~~~~~Iv~ga-----~n~~~g~~V~va~~Ga~l~~~~~i~~~~~~Gv~S~GM- 119 (798)
T TIGR00472 46 VVVGKVLEVEPHPNADKLKVCKVDIGEKEMLQIVCGA-----PNVEAGKKVAVALPGAKLPNGLKIKKSKLRGVESEGM- 119 (798)
T ss_pred EEEEEEEEEEecCCCCcEEEEEEEcCCCceEEEEeCC-----ccccCCCEEEEEccCCCccCCceEeeeecCCeeechh-
Confidence 8999999999999999999999999976789999999 677899999999 4799999999999999
Q ss_pred eeccCC-----CCCceEEecCCCCCCCCceEE-EcCCC
Q 015335 324 LCASNE-----DHTNVEPLLPPEGAKIGERIS-FSGID 355 (408)
Q Consensus 324 Lca~~~-----~~~~v~ll~pp~~~~~G~~v~-~~g~~ 355 (408)
||+..+ ++.++ +.+|+++++|+++. +.|++
T Consensus 120 lcs~~elg~~~~~~gi--~~l~~~~~~G~~~~~~l~l~ 155 (798)
T TIGR00472 120 LCSEDELGLDEKSDGI--IVLDEDAPLGTDIAEYLGLD 155 (798)
T ss_pred cccHhHcCCCCCCCCE--EEcCCCCCCCccHHHHhCCC
Confidence 687764 23565 56688899999998 77765
No 16
>PRK00629 pheT phenylalanyl-tRNA synthetase subunit beta; Reviewed
Probab=99.59 E-value=1.7e-15 Score=167.67 Aligned_cols=94 Identities=39% Similarity=0.669 Sum_probs=82.1
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEe---------ecccccccccccccee
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALIT---------NVKPGKLRDVMSEGLV 323 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~---------nlkp~k~rGv~S~gMv 323 (408)
++||+|+++++||++|+|++|+||+|+ +.+||+||+ +|...|++|+|+. +|++++|||+.|+||
T Consensus 45 i~vg~i~~~~~hp~~~~L~v~~v~~g~-~~~~iv~ga-----~n~~~g~~v~~a~~G~~l~~~~~i~~~~~~Gv~S~GM- 117 (791)
T PRK00629 45 VVVGKVLECEKHPNADKLRVCQVDVGE-EPLQIVCGA-----PNVRAGDKVPVALPGAVLPGGFKIKKAKLRGVESEGM- 117 (791)
T ss_pred EEEEEEEEEEecCCCCeEEEEEEEcCC-eEEEEEeCC-----ccccCCCEEEEEccCCCccCCceEeeeecCCeEEchh-
Confidence 799999999999999999999999998 579999999 5667999999953 599999999999999
Q ss_pred eeccCC-----CCCceEEecCCCCCCCCceEE-EcCCC
Q 015335 324 LCASNE-----DHTNVEPLLPPEGAKIGERIS-FSGID 355 (408)
Q Consensus 324 Lca~~~-----~~~~v~ll~pp~~~~~G~~v~-~~g~~ 355 (408)
||+..| ++.|| +.+|+++++|+.+. ++|++
T Consensus 118 lcs~~ELGl~~~~~GI--~~L~~~~~~G~~~~~~l~l~ 153 (791)
T PRK00629 118 LCSASELGLSDDHDGI--IELPEDAPVGTDAREYLGLD 153 (791)
T ss_pred cccHhHcCCCcCCCCe--EECCCCCCCCccHHHHhCCC
Confidence 788765 44676 55678899999998 87875
No 17
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.52 E-value=7.6e-14 Score=130.77 Aligned_cols=126 Identities=17% Similarity=0.223 Sum_probs=96.2
Q ss_pred HHhCCCCCcccCCCC------------cccHHHHHHHHhcCCCc------ccHHHHHHHHHHHhcCCCC-----------
Q 015335 21 KHLSLDHKDFSSNAA------------EKDIKTLYSDILKSSGK------SSNDEVMKWIEFAESFPAD----------- 71 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~------------~~~l~~I~~~L~~~~G~------~erAeV~qWL~fa~s~~~~----------- 71 (408)
.|+++||.+.+|++. ..+..+|++||.+.++. .+|+++.+|+.|..+.+.+
T Consensus 42 ~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (215)
T PRK13972 42 EFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHA 121 (215)
T ss_pred HHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeecc
Confidence 588899998666432 23556999999877642 2699999999998643221
Q ss_pred ------h------HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhH
Q 015335 72 ------S------KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKE 139 (408)
Q Consensus 72 ------~------~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p 139 (408)
. ..+.+.|..||.+|..+.||+ |+++|+|||++++.+..+... ......||+|.||+++|.++|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--Gd~~t~ADi~l~~~~~~~~~~--~~~~~~~P~l~~w~~r~~~rp 197 (215)
T PRK13972 122 APQTIPYAIERYQVETQRLYHVLNKRLENSPWLG--GENYSIADIACWPWVNAWTRQ--RIDLAMYPAVKNWHERIRSRP 197 (215)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhccCcccc--CCCCCHHHHHHHHHHHHHhhc--CCcchhCHHHHHHHHHHHhCH
Confidence 0 245668999999999999999 679999999998877555321 234678999999999999999
Q ss_pred hhHhhhccccc
Q 015335 140 ALGDLFGTISL 150 (408)
Q Consensus 140 ~~~~~~~~i~~ 150 (408)
.|+.++..-.+
T Consensus 198 ~~~~~~~~~~~ 208 (215)
T PRK13972 198 ATGQALLKAQL 208 (215)
T ss_pred HHHHHHHHhcc
Confidence 99998765443
No 18
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=1.8e-13 Score=130.41 Aligned_cols=124 Identities=22% Similarity=0.262 Sum_probs=99.7
Q ss_pred HHhCCCCCcccCCCC-----cccHHHHHHHHhcCCCc----------ccHHHHHHHHHHHhcCCCC--------------
Q 015335 21 KHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSGK----------SSNDEVMKWIEFAESFPAD-------------- 71 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~----------~erAeV~qWL~fa~s~~~~-------------- 71 (408)
.|+++||.+.+|+.. .++.++|++||+..|+. .+|+.|+|||+|.++.+.+
T Consensus 44 efl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~ 123 (226)
T KOG0867|consen 44 EFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGPLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVG 123 (226)
T ss_pred HHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceec
Confidence 578889988666543 56677999999987641 1499999999999775432
Q ss_pred -----------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhcc-ccCCCCChhHHHHHHHHHhhH
Q 015335 72 -----------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLA-NLDQGKMPHVMRWMDYIQSKE 139 (408)
Q Consensus 72 -----------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~-~~~~~~yP~I~RW~d~Vq~~p 139 (408)
...+...+..+|.+|.++.|++ |+++|+||+.+.+.+......+. .....+||++.||+++++++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~--g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P 201 (226)
T KOG0867|consen 124 LPLNPTAVKELEAKLRKALDNLERFLKTQVYLA--GDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRP 201 (226)
T ss_pred ccCcchhhHHHHHHHHHHHHHHHHHHccCCccc--CCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCc
Confidence 1577889999999999999999 67999999999999987632222 567899999999999999999
Q ss_pred hhHhhhc
Q 015335 140 ALGDLFG 146 (408)
Q Consensus 140 ~~~~~~~ 146 (408)
++.+..+
T Consensus 202 ~~~e~~~ 208 (226)
T KOG0867|consen 202 AYEEANE 208 (226)
T ss_pred cHHHHHH
Confidence 8877643
No 19
>PLN02395 glutathione S-transferase
Probab=99.43 E-value=5.8e-13 Score=124.22 Aligned_cols=127 Identities=17% Similarity=0.172 Sum_probs=94.4
Q ss_pred HHhCCCCCcccCCCC-----cccHHHHHHHHhcCCC--------c--ccHHHHHHHHHHHhcCCCC--------------
Q 015335 21 KHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSG--------K--SSNDEVMKWIEFAESFPAD-------------- 71 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G--------~--~erAeV~qWL~fa~s~~~~-------------- 71 (408)
+|+++||.+.+|++. .++..+|++||...++ . .+++++++|++|.++.+.+
T Consensus 43 ~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (215)
T PLN02395 43 EYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASK 122 (215)
T ss_pred HHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhh
Confidence 577888888666442 4567799999987542 1 2699999999987543211
Q ss_pred -------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhcc-ccCCCCChhHHHHHHHHHh
Q 015335 72 -------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLA-NLDQGKMPHVMRWMDYIQS 137 (408)
Q Consensus 72 -------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~-~~~~~~yP~I~RW~d~Vq~ 137 (408)
...+.+.|..||.+|+.++||+ |+++|+||++++..+..+..... ...+..||+|.||+++|.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~ 200 (215)
T PLN02395 123 MGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLA--GDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISS 200 (215)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcccc--CCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHc
Confidence 0234568899999999899999 67999999999887654421111 1246789999999999999
Q ss_pred hHhhHhhhcccc
Q 015335 138 KEALGDLFGTIS 149 (408)
Q Consensus 138 ~p~~~~~~~~i~ 149 (408)
+|.|+..+..+.
T Consensus 201 rp~~k~~~~~~~ 212 (215)
T PLN02395 201 RPAWKEVLAKYS 212 (215)
T ss_pred ChHHHHHHHHhc
Confidence 999999987654
No 20
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.43 E-value=7.4e-13 Score=122.10 Aligned_cols=122 Identities=14% Similarity=0.211 Sum_probs=93.3
Q ss_pred HHhCCCCCcccCCCC------cccHHHHHHHHhcCCCc---------ccHHHHHHHHHHHhcCCCC--------------
Q 015335 21 KHLSLDHKDFSSNAA------EKDIKTLYSDILKSSGK---------SSNDEVMKWIEFAESFPAD-------------- 71 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~------~~~l~~I~~~L~~~~G~---------~erAeV~qWL~fa~s~~~~-------------- 71 (408)
.|+++||.+.+|++. .+++.+|++||.+.++. .+|+++.+|+.|..+.+.+
T Consensus 42 ~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (201)
T PRK10542 42 DYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEY 121 (201)
T ss_pred HHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHH
Confidence 578888888665442 34566999999766531 2699999999988654321
Q ss_pred ----hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 72 ----SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 72 ----~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
...+.+.|..||.+|..++||+ |+++|+|||+++..+.+. ... ..+...||+|.+|+++|.++|.|+..+.
T Consensus 122 ~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~s~ADi~l~~~~~~~-~~~-~~~~~~~p~l~~w~~~~~~~p~~k~~~~ 196 (201)
T PRK10542 122 KPTVRAQLEKKFQYVDEALADEQWIC--GQRFTIADAYLFTVLRWA-YAV-KLNLEGLEHIAAYMQRVAERPAVAAALK 196 (201)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeee--CCCCcHHhHHHHHHHHHh-hcc-CCCcccchHHHHHHHHHHcCHHHHHHHH
Confidence 1356678999999999999999 679999999999887654 222 2345789999999999999999998864
No 21
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.42 E-value=4.6e-13 Score=125.36 Aligned_cols=123 Identities=9% Similarity=0.036 Sum_probs=90.6
Q ss_pred HHhCCCCCcccCCCC-----cccHHHHHHHHhcCCCc--------ccHHHHHHHHHHHhcCC--------CC--------
Q 015335 21 KHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSGK--------SSNDEVMKWIEFAESFP--------AD-------- 71 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~--------~erAeV~qWL~fa~s~~--------~~-------- 71 (408)
+|+++||.+.+|++. ..++.+|++||.+.++. .+|+++.+|+.|..+.. ..
T Consensus 49 ~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (211)
T PRK09481 49 DLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADAA 128 (211)
T ss_pred HHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 567777777555432 34566999999887642 25899999998764321 01
Q ss_pred hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhcc-ccCCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 72 SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLA-NLDQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 72 ~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~-~~~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
...+...|..||.+|.++.||+ |+++|+||++++..++... ... +.....||+|.+|+++|.++|.|+..+.
T Consensus 129 ~~~l~~~l~~le~~L~~~~~l~--G~~~t~AD~~l~~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~ 201 (211)
T PRK09481 129 RKQLREELLAIAPVFGEKPYFM--SEEFSLVDCYLAPLLWRLP-VLGIELSGPGAKELKGYMTRVFERDSFLASLT 201 (211)
T ss_pred HHHHHHHHHHHHHHhccCCccc--CCCccHHHHHHHHHHHHHH-hcCCCCCCCCChhHHHHHHHHhccHHHHHHcC
Confidence 0345667899999999999999 6799999999998886542 111 1122579999999999999999998854
No 22
>PLN02473 glutathione S-transferase
Probab=99.38 E-value=1.3e-12 Score=122.02 Aligned_cols=124 Identities=16% Similarity=0.133 Sum_probs=90.9
Q ss_pred HHhCCCCCcccCCCC-----cccHHHHHHHHhcCCC--------c--ccHHHHHHHHHHHhcCCCC--------------
Q 015335 21 KHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSG--------K--SSNDEVMKWIEFAESFPAD-------------- 71 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G--------~--~erAeV~qWL~fa~s~~~~-------------- 71 (408)
.|+.+||.+.+|.+. .++..+|++||.+.++ . .+|+++++|++|..+.+.+
T Consensus 44 ~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (214)
T PLN02473 44 EHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPR 123 (214)
T ss_pred HHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhccc
Confidence 466677777555432 3456799999976653 1 2599999999887553310
Q ss_pred -------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhcc-ccCCCCChhHHHHHHHHHh
Q 015335 72 -------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLA-NLDQGKMPHVMRWMDYIQS 137 (408)
Q Consensus 72 -------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~-~~~~~~yP~I~RW~d~Vq~ 137 (408)
...+.+.|..||++|.+++||+ |+++|+||++++..+.+...... ......||+|.+|+++|.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~ 201 (214)
T PLN02473 124 LGEPCDVALVEELKVKFDKVLDVYENRLATNRYLG--GDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISA 201 (214)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHhccCCccc--CCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhc
Confidence 0245568899999999999999 67999999999988865321111 1124789999999999999
Q ss_pred hHhhHhhhc
Q 015335 138 KEALGDLFG 146 (408)
Q Consensus 138 ~p~~~~~~~ 146 (408)
+|.|+..+.
T Consensus 202 ~p~~~~~~~ 210 (214)
T PLN02473 202 RPAWKKLME 210 (214)
T ss_pred ChhhHHHHH
Confidence 999998864
No 23
>PRK11752 putative S-transferase; Provisional
Probab=99.36 E-value=3.1e-12 Score=124.52 Aligned_cols=124 Identities=17% Similarity=0.240 Sum_probs=92.6
Q ss_pred HHhCCCCCcccCCCC---------cccHHHHHHHHhcCCCc------ccHHHHHHHHHHHhcCCC-------------Ch
Q 015335 21 KHLSLDHKDFSSNAA---------EKDIKTLYSDILKSSGK------SSNDEVMKWIEFAESFPA-------------DS 72 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~---------~~~l~~I~~~L~~~~G~------~erAeV~qWL~fa~s~~~-------------~~ 72 (408)
.|+++||.+.+|++. ..++.+|++||.+.++. .+|+++++|++|..+... +.
T Consensus 91 e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~~L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T PRK11752 91 GFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGAFLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPE 170 (264)
T ss_pred HHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcCCcCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCc
Confidence 477899998666432 24567999999887652 269999999999754210 10
Q ss_pred ----------HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhh--cc---ccCCCCChhHHHHHHHHHh
Q 015335 73 ----------KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVG--LA---NLDQGKMPHVMRWMDYIQS 137 (408)
Q Consensus 73 ----------~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~--~~---~~~~~~yP~I~RW~d~Vq~ 137 (408)
..+.+.|..||.+|..+.||+ |+++|+|||+++..+..+... +. ..+...||+|.+|+++|.+
T Consensus 171 ~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~--Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~ 248 (264)
T PRK11752 171 KIEYAINRFTMEAKRQLDVLDKQLAEHEYIA--GDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAE 248 (264)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccCCCCC--CCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHh
Confidence 245668999999999999999 679999999999877543211 00 1235789999999999999
Q ss_pred hHhhHhhhc
Q 015335 138 KEALGDLFG 146 (408)
Q Consensus 138 ~p~~~~~~~ 146 (408)
+|.|+.++.
T Consensus 249 rPs~k~~~~ 257 (264)
T PRK11752 249 RPAVKRGRI 257 (264)
T ss_pred CHHHHHHHh
Confidence 999998753
No 24
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.33 E-value=1.1e-11 Score=115.15 Aligned_cols=122 Identities=11% Similarity=0.045 Sum_probs=88.8
Q ss_pred HhCCCCCcccCCCC-----cccHHHHHHHHhcCCCc--------ccHHHHHHHHHHHhcCCCC-----------------
Q 015335 22 HLSLDHKDFSSNAA-----EKDIKTLYSDILKSSGK--------SSNDEVMKWIEFAESFPAD----------------- 71 (408)
Q Consensus 22 yl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~--------~erAeV~qWL~fa~s~~~~----------------- 71 (408)
|+++||.+..|.+. .++..+|++||...++. .+++++++|++|..+.+.+
T Consensus 43 ~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (210)
T TIGR01262 43 FLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVE 122 (210)
T ss_pred hhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCC
Confidence 44555555444332 24456999999876531 2699999999988643210
Q ss_pred -h-------HHHHHHHHHHHhhcCCCC--eEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhh
Q 015335 72 -S-------KACFDVLIKLNEELATKS--VLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEAL 141 (408)
Q Consensus 72 -~-------~~~~~~L~~Ln~~L~~rt--yLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~ 141 (408)
. +.+.+.|..||++|..+. ||+ |+++|+||++++..+.+.. .+ ......||+|.+|+++|.++|.|
T Consensus 123 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~--G~~~T~ADi~~~~~l~~~~-~~-~~~~~~~p~l~~~~~~~~~rp~~ 198 (210)
T TIGR01262 123 EEARNRWYQHWISKGFAALEALLQPHAGAFCV--GDTPTLADLCLVPQVYNAE-RF-GVDLTPYPTLRRIAAALAALPAF 198 (210)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCEee--CCCCCHHHHHHHHHHHHHH-Hc-CCCcccchHHHHHHHHHhcCHHH
Confidence 0 235578999999998644 999 6799999999999986542 22 23457899999999999999999
Q ss_pred Hhhhcc
Q 015335 142 GDLFGT 147 (408)
Q Consensus 142 ~~~~~~ 147 (408)
+..++.
T Consensus 199 ~~~~~~ 204 (210)
T TIGR01262 199 QRAHPE 204 (210)
T ss_pred HHhCcc
Confidence 998664
No 25
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.31 E-value=8.4e-12 Score=104.17 Aligned_cols=87 Identities=23% Similarity=0.354 Sum_probs=69.7
Q ss_pred cHHHHHHHHHHHhcCCCC------------------h-------HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPAD------------------S-------KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFS 108 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~------------------~-------~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~ 108 (408)
+|+++.||++|..+.+.+ . ..+.+.|..||++|.+++||+ |+++|+|||+++.
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~--G~~~t~aDi~~~~ 79 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLL--GDRFSVADAYLFV 79 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeee--CCCcchHHHHHHH
Confidence 589999999999664421 0 355668899999999999999 6799999999998
Q ss_pred HHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhh
Q 015335 109 AVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDL 144 (408)
Q Consensus 109 ~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~ 144 (408)
.+..+ .. ...+...||+|.+|+++|.++|.|+.+
T Consensus 80 ~~~~~-~~-~~~~~~~~p~l~~w~~~~~~~p~~k~~ 113 (114)
T cd03188 80 VLRWA-PG-VGLDLSDWPNLAAYLARVAARPAVQAA 113 (114)
T ss_pred HHHHH-hh-cCCChhhChHHHHHHHHHHhCHHhHhh
Confidence 88654 22 233456899999999999999999875
No 26
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.31 E-value=1.3e-11 Score=115.20 Aligned_cols=119 Identities=15% Similarity=0.180 Sum_probs=93.4
Q ss_pred HHHhCCCCCcccCCCC------cccHHHHHHHHhcCCCc-------c----cHHHHHHHHHHHhcCCCCh----------
Q 015335 20 CKHLSLDHKDFSSNAA------EKDIKTLYSDILKSSGK-------S----SNDEVMKWIEFAESFPADS---------- 72 (408)
Q Consensus 20 ~kyl~Lnp~~v~~~~~------~~~l~~I~~~L~~~~G~-------~----erAeV~qWL~fa~s~~~~~---------- 72 (408)
-.|+.+||.+.+|.+. .++..+|++||...++. + +|+++.+|+.|..+.+.+.
T Consensus 40 ~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (211)
T COG0625 40 PDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGPPLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLG 119 (211)
T ss_pred HHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCCCcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhcc
Confidence 3588999999776442 45667999999888752 2 6889999999986654320
Q ss_pred --------------HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhh
Q 015335 73 --------------KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSK 138 (408)
Q Consensus 73 --------------~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~ 138 (408)
..+...|..||.+|..++||+ |+++|+||+++++.+.++.. ...+...||+|.+|+++|..+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~tiAD~~~~~~~~~~~~--~~~~~~~~p~l~~w~~r~~~r 195 (211)
T COG0625 120 SEPELLEAALEAARAEIRALLALLEALLADGPYLA--GDRFTIADIALAPLLWRLAL--LGEELADYPALKAWYERVLAR 195 (211)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHhccCCccc--CCCCCHHHHHHHHHHHHhhh--cCcccccChHHHHHHHHHHcC
Confidence 345668999999999999999 78999999999988876421 223347899999999999999
Q ss_pred HhhH
Q 015335 139 EALG 142 (408)
Q Consensus 139 p~~~ 142 (408)
|.++
T Consensus 196 p~~~ 199 (211)
T COG0625 196 PAFR 199 (211)
T ss_pred Cchh
Confidence 9865
No 27
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.30 E-value=8.7e-12 Score=104.90 Aligned_cols=89 Identities=18% Similarity=0.197 Sum_probs=69.4
Q ss_pred cHHHHHHHHHHHhcCCCC---------------------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPAD---------------------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIV 106 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~---------------------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l 106 (408)
+|+++++|++|.++.+.+ ...+.+.+..||.+|..+.|++ |+++|+|||++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~t~aDi~l 79 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLA--GDSFTLADLSH 79 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccC--CCCccHHHHHH
Confidence 578999999997654321 0356678999999999999999 67999999999
Q ss_pred HHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhh
Q 015335 107 FSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDL 144 (408)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~ 144 (408)
++.+.++........+..||+|.||+++|.++|.|+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 117 (118)
T cd03187 80 LPYLQYLMATPFAKLFDSRPHVKAWWEDISARPAWKKV 117 (118)
T ss_pred HHHHHHHHHccchhhhhcCchHHHHHHHHHhCHHHHhh
Confidence 98887653211112356899999999999999999765
No 28
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=7.6e-12 Score=106.76 Aligned_cols=89 Identities=22% Similarity=0.294 Sum_probs=71.2
Q ss_pred cHHHHHHHHHHHhcCCCC-------------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPAD-------------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFV 114 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~-------------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~ 114 (408)
.|++|+||++|....+.+ ...+.+.|..||++|.+++|++ |+++|+|||++++.+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~--Gd~~tlADi~l~~~l~~~~ 83 (115)
T cd03196 6 ALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQHSYLL--GDKPSLADWAIFPFVRQFA 83 (115)
T ss_pred HHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccCCccC--CCCccHHHHHHHHHHHHHH
Confidence 589999999998775532 0367789999999999999999 6799999999998876542
Q ss_pred hh-ccccCCCCChhHHHHHHHHHhhHhhHhh
Q 015335 115 VG-LANLDQGKMPHVMRWMDYIQSKEALGDL 144 (408)
Q Consensus 115 ~~-~~~~~~~~yP~I~RW~d~Vq~~p~~~~~ 144 (408)
.. ........||||.||+++|.++|+|+.+
T Consensus 84 ~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 84 HVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 11 0112358999999999999999999875
No 29
>PLN02907 glutamate-tRNA ligase
Probab=99.29 E-value=1.7e-11 Score=134.14 Aligned_cols=128 Identities=16% Similarity=0.250 Sum_probs=95.1
Q ss_pred chhHHHHHHHHHHhCCCCCc-------ccCCCC------cccHHHHHHHHhcCCCc--------ccHHHHHHHHHHHhcC
Q 015335 10 TRKQLIVSILCKHLSLDHKD-------FSSNAA------EKDIKTLYSDILKSSGK--------SSNDEVMKWIEFAESF 68 (408)
Q Consensus 10 ~~r~~~~~~l~kyl~Lnp~~-------v~~~~~------~~~l~~I~~~L~~~~G~--------~erAeV~qWL~fa~s~ 68 (408)
..+...+.++.++++++... .+|++. ..+..+|++||...++. .++++|++|++|+.+.
T Consensus 10 ~S~~~~v~~~L~~lgv~~e~~~~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~L~p~d~~erAqV~qWL~~~~~~ 89 (722)
T PLN02907 10 DSPPLAVIAAAKVAGVPLTIDPSLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLPGFYGQDAFESSQVDEWLDYAPTF 89 (722)
T ss_pred CCChHHHHHHHHHcCCCcEEeecCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHHhhc
Confidence 33455677788888865443 223321 35567999999886521 2699999999998764
Q ss_pred CCChHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccc-cCCCCChhHHHHHHHHHhhHh
Q 015335 69 PADSKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLAN-LDQGKMPHVMRWMDYIQSKEA 140 (408)
Q Consensus 69 ~~~~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~-~~~~~yP~I~RW~d~Vq~~p~ 140 (408)
. ....+...|+.||.+|..++||+ |+++|+|||++|+.++.....|.. .....||||.|||++|+++|.
T Consensus 90 ~-~~~~l~~~L~~LE~~L~~rtYLv--Gd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 90 S-SGSEFENACEYVDGYLASRTFLV--GYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred c-cHHHHHHHHHHHHHHhccCCeec--CCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 4 23466788999999999999999 679999999999988543112221 235789999999999999998
No 30
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.25 E-value=2e-11 Score=101.27 Aligned_cols=78 Identities=23% Similarity=0.333 Sum_probs=64.4
Q ss_pred cHHHHHHHHHHHhcCC--CChHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHH
Q 015335 54 SNDEVMKWIEFAESFP--ADSKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRW 131 (408)
Q Consensus 54 erAeV~qWL~fa~s~~--~~~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW 131 (408)
++++|++|+++....+ ....+....+..||.+|..++||+ |+++|+|||+++..+.+. ......||||.||
T Consensus 17 ~~~~vd~~~d~~~~~l~~~~~~~~~~~l~~le~~L~~~~fl~--Gd~~tiADi~l~~~l~~~-----~~~~~~~p~l~~w 89 (96)
T cd03200 17 AATNIDSWVDTAIFQLAEGSSKEKAAVLRALNSALGRSPWLV--GSEFTVADIVSWCALLQT-----GLASAAPANVQRW 89 (96)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCccC--CCCCCHHHHHHHHHHHHc-----ccccccChHHHHH
Confidence 7999999999886433 345677889999999999999999 679999999999887642 2234689999999
Q ss_pred HHHHHhh
Q 015335 132 MDYIQSK 138 (408)
Q Consensus 132 ~d~Vq~~ 138 (408)
+++|.++
T Consensus 90 ~~r~~~~ 96 (96)
T cd03200 90 LKSCENL 96 (96)
T ss_pred HHHHHhC
Confidence 9999863
No 31
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.24 E-value=2e-11 Score=102.19 Aligned_cols=89 Identities=25% Similarity=0.348 Sum_probs=71.0
Q ss_pred cHHHHHHHHHHHhcCCCCh-----------------------HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPADS-----------------------KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAV 110 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~~-----------------------~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l 110 (408)
+|+++++||+|.++.+.+. ..+.+.|..||.+|.+++||+ |+++|+|||++++.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~t~aDi~l~~~~ 78 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLA--GDEYSIADIAIFPWV 78 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCccc--CCCCCeeeeeHHHHH
Confidence 4789999999997755320 356678999999999999999 679999999999888
Q ss_pred HHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhh
Q 015335 111 HSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLF 145 (408)
Q Consensus 111 ~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~ 145 (408)
.+... ........||+|.+|+++|.++|.|+.++
T Consensus 79 ~~~~~-~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 79 RRLEW-IGIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHh-ccccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 76421 21112678999999999999999998764
No 32
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.23 E-value=2.8e-11 Score=107.05 Aligned_cols=91 Identities=19% Similarity=0.250 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHhcCCCC-----------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhh-
Q 015335 55 NDEVMKWIEFAESFPAD-----------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVG- 116 (408)
Q Consensus 55 rAeV~qWL~fa~s~~~~-----------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~- 116 (408)
|++|++|++|....+.+ ...+...|+.||++|.+++|++ |+++|+|||++++.+.++...
T Consensus 5 ~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~--Gd~~TlADi~l~~~l~~~~~~~ 82 (142)
T cd03190 5 RSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLL--GDRLTEADIRLFTTLIRFDAVY 82 (142)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeee--CCCccHHHHHHHHHHHHHHHHh
Confidence 78999999998664432 1366678999999999999999 679999999999988765211
Q ss_pred --cc---ccCCCCChhHHHHHHHHHhhHhhHhhhcc
Q 015335 117 --LA---NLDQGKMPHVMRWMDYIQSKEALGDLFGT 147 (408)
Q Consensus 117 --~~---~~~~~~yP~I~RW~d~Vq~~p~~~~~~~~ 147 (408)
.. ......||+|.+|+++|.++|.|+..+..
T Consensus 83 ~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 83 VQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred hhhcccccchhhhCchHHHHHHHHhcCchHhhhcCH
Confidence 10 11246899999999999999999988653
No 33
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.23 E-value=2.6e-11 Score=102.98 Aligned_cols=89 Identities=18% Similarity=0.217 Sum_probs=71.2
Q ss_pred cHHHHHHHHHHHhcCCCC--------------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPAD--------------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSF 113 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~--------------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~ 113 (408)
+|+++++||+|..+.+.+ ...+.+.|+.||.+|.+++||+ |+++|+|||+++..+.++
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~s~aDi~l~~~~~~~ 79 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLEGSDYVA--GDQLTIADLSLVATVSTL 79 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHccCCeeC--CCCcCHHHHHHHHHHHHH
Confidence 478999999998664421 1466789999999999889999 679999999999988765
Q ss_pred HhhccccCCCCChhHHHHHHHHHhhHhhHhhh
Q 015335 114 VVGLANLDQGKMPHVMRWMDYIQSKEALGDLF 145 (408)
Q Consensus 114 ~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~ 145 (408)
.. ....+...||+|.+|+++|.++|+|+...
T Consensus 80 ~~-~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 80 EA-LLPLDLSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HH-hcCCChhhCchHHHHHHHHHcccchHHHH
Confidence 21 01233568999999999999999998754
No 34
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.22 E-value=4.7e-11 Score=99.02 Aligned_cols=84 Identities=20% Similarity=0.406 Sum_probs=67.3
Q ss_pred cHHHHHHHHHHHhcCCCCh-------------------------HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPADS-------------------------KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFS 108 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~~-------------------------~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~ 108 (408)
+|+++++|++|.++.+.+. ..+.+.|+.||++|.++.|++ |+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~--g~~~t~aDi~~~~ 79 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLA--GDRFTLADIPLGC 79 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCccc--CCCCCHHHHHHHH
Confidence 5789999999986654320 356678999999999999999 6799999999998
Q ss_pred HHHHHHhhccccCCCCChhHHHHHHHHHhhHhh
Q 015335 109 AVHSFVVGLANLDQGKMPHVMRWMDYIQSKEAL 141 (408)
Q Consensus 109 ~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~ 141 (408)
.++.+.. . ......||+|.+|+++|.++|.|
T Consensus 80 ~~~~~~~-~-~~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 80 SAYRWFE-L-PIERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHH-c-ccccccCchHHHHHHHHHhCCCC
Confidence 8865432 1 23468999999999999999865
No 35
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.19 E-value=4.2e-11 Score=111.75 Aligned_cols=121 Identities=10% Similarity=0.016 Sum_probs=89.3
Q ss_pred CCCCCcccCCCC-----cccHHHHHHHHhcCCCc---ccHHHHHHHHHHHhc-CCC----C------------hHHHHHH
Q 015335 24 SLDHKDFSSNAA-----EKDIKTLYSDILKSSGK---SSNDEVMKWIEFAES-FPA----D------------SKACFDV 78 (408)
Q Consensus 24 ~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~---~erAeV~qWL~fa~s-~~~----~------------~~~~~~~ 78 (408)
++||.+.+|.+. .+...+|++||++.+|. .+++++.+|+.|... .+. . ...+.+.
T Consensus 52 ~~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (205)
T PTZ00057 52 KDTPFEQVPILEMDNIIFAQSQAIVRYLSKKYKICGESELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEELPKW 131 (205)
T ss_pred CCCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 367776555432 35566999999988743 567777888877653 111 0 1355678
Q ss_pred HHHHHhhcCCC--CeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhcc
Q 015335 79 LIKLNEELATK--SVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFGT 147 (408)
Q Consensus 79 L~~Ln~~L~~r--tyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~~ 147 (408)
|..||++|..+ +||+ |+++|+||++++..+...... .+.+...||+|.+|+++|.++|.|++.+..
T Consensus 132 l~~le~~L~~~~~~~l~--Gd~~T~AD~~l~~~~~~~~~~-~~~~l~~~P~l~~~~~r~~~~P~~k~y~~~ 199 (205)
T PTZ00057 132 SGYFENILKKNHCNYFV--GDNLTYADLAVFNLYDDIETK-YPNSLKNFPLLKAHNEFISNLPNIKNYISN 199 (205)
T ss_pred HHHHHHHHHhCCCCeee--CCcccHHHHHHHHHHHHHHHh-ChhhhccChhHHHHHHHHHhChHHHHHHHh
Confidence 89999999764 7999 679999999999887654221 234578999999999999999999998753
No 36
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.18 E-value=6.6e-11 Score=109.45 Aligned_cols=122 Identities=12% Similarity=-0.026 Sum_probs=87.1
Q ss_pred HhCCCCCcccCCCC------cccHHHHHHHHhcCCCc--------ccHHHHHHHHHHHhcCCC-----------C-----
Q 015335 22 HLSLDHKDFSSNAA------EKDIKTLYSDILKSSGK--------SSNDEVMKWIEFAESFPA-----------D----- 71 (408)
Q Consensus 22 yl~Lnp~~v~~~~~------~~~l~~I~~~L~~~~G~--------~erAeV~qWL~fa~s~~~-----------~----- 71 (408)
+..+||.+.+|++. ..+..+|++||...+.. .+++++++|+.|..+... +
T Consensus 40 ~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (202)
T PRK10357 40 VAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQS 119 (202)
T ss_pred hhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccc
Confidence 34567777555432 24567999999876521 258899999888754221 0
Q ss_pred -------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHH-hhccccCCCCChhHHHHHHHHHhhHhhHh
Q 015335 72 -------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFV-VGLANLDQGKMPHVMRWMDYIQSKEALGD 143 (408)
Q Consensus 72 -------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~-~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~ 143 (408)
...+.+.|..||.+|.++. |+ |+++|+|||++++.+.++. ..........||+|.+|+++|.++|+|+.
T Consensus 120 ~~~~~~~~~~l~~~l~~le~~L~~~~-l~--Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~ 196 (202)
T PRK10357 120 EDELLRQREKINRSLDALEGYLVDGT-LK--TDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFAR 196 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCc-cc--CCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhh
Confidence 0345678999999998877 99 6899999999999887531 11111224689999999999999999988
Q ss_pred hhc
Q 015335 144 LFG 146 (408)
Q Consensus 144 ~~~ 146 (408)
..+
T Consensus 197 ~~~ 199 (202)
T PRK10357 197 TEP 199 (202)
T ss_pred cCC
Confidence 643
No 37
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.17 E-value=1.6e-10 Score=98.36 Aligned_cols=89 Identities=13% Similarity=0.044 Sum_probs=69.6
Q ss_pred cHHHHHHHHHHHhcCCCC-----------------h--------HHHHHHHHHHHhhcCC--CCeEeecCCCccHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPAD-----------------S--------KACFDVLIKLNEELAT--KSVLLGNGLRTSEADVIV 106 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~-----------------~--------~~~~~~L~~Ln~~L~~--rtyLvGnG~~~TlADI~l 106 (408)
+|+.++||++|..+.+.+ . ..+.+.|..||.+|.+ .+||+ |+++|+|||++
T Consensus 3 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~--G~~~t~ADi~~ 80 (121)
T cd03191 3 KRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCF--GDEPTLADICL 80 (121)
T ss_pred hHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeec--CCcCCHHHHHH
Confidence 588999999998764431 0 2345688999999983 47999 67999999999
Q ss_pred HHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 107 FSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
+..+.+... . ..+...||+|.+|+++|.++|.|+..++
T Consensus 81 ~~~~~~~~~-~-~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 81 VPQVYNARR-F-GVDLSPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHH-h-CCCcccCcHHHHHHHHHHhChhHHHhCc
Confidence 998865322 1 2335889999999999999999998754
No 38
>PRK15113 glutathione S-transferase; Provisional
Probab=99.17 E-value=1.3e-10 Score=109.11 Aligned_cols=120 Identities=8% Similarity=-0.010 Sum_probs=88.1
Q ss_pred HHhCCCCCcccCCCC-----cccHHHHHHHHhcCCCc-----------ccHHHHHHHHHHHhcCCC-------------C
Q 015335 21 KHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSGK-----------SSNDEVMKWIEFAESFPA-------------D 71 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~-----------~erAeV~qWL~fa~s~~~-------------~ 71 (408)
.|+++||.+.+|++. .+++.+|++||.+.++. .+|+++++|+.|..+.+. +
T Consensus 49 ~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (214)
T PRK15113 49 TYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAG 128 (214)
T ss_pred HHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccC
Confidence 577778887665432 35677999999877641 259999999998854221 0
Q ss_pred ----------hHHHHHHHHHHHhhcCC-CCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHh
Q 015335 72 ----------SKACFDVLIKLNEELAT-KSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEA 140 (408)
Q Consensus 72 ----------~~~~~~~L~~Ln~~L~~-rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~ 140 (408)
...+.+.|..||++|.. ..||+ |+ +|+|||+++..+.+.. .. .... .|+|.+|+++|.++|.
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~--G~-~TlADi~l~~~l~~~~-~~-~~~~--~p~l~~~~~r~~~rp~ 201 (214)
T PRK15113 129 AKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLF--GE-WCIADTDLALMLNRLV-LH-GDEV--PERLADYATFQWQRAS 201 (214)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHhcCCCEee--CC-ccHHHHHHHHHHHHHH-Hc-CCCC--CHHHHHHHHHHhcCHH
Confidence 14566789999999975 46998 64 9999999999987542 11 2222 2999999999999999
Q ss_pred hHhhhcc
Q 015335 141 LGDLFGT 147 (408)
Q Consensus 141 ~~~~~~~ 147 (408)
|+..+..
T Consensus 202 ~~~~~~~ 208 (214)
T PRK15113 202 VQRWLAL 208 (214)
T ss_pred HHHHHHH
Confidence 9998653
No 39
>PLN02378 glutathione S-transferase DHAR1
Probab=99.17 E-value=3.4e-11 Score=113.17 Aligned_cols=124 Identities=14% Similarity=0.063 Sum_probs=89.8
Q ss_pred HHhCCCCCcccCCCC-----cccHHHHHHHHhcCCCc------ccHHHHHHHHHHHhcC-CC----C---hHHHHHHHHH
Q 015335 21 KHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSGK------SSNDEVMKWIEFAESF-PA----D---SKACFDVLIK 81 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~------~erAeV~qWL~fa~s~-~~----~---~~~~~~~L~~ 81 (408)
.|+++||.+.+|++. .++..+|++||.+.++. .+++.+++++...... .. . ...+.+.|..
T Consensus 50 ~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (213)
T PLN02378 50 WFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLKTPAEFASVGSNIFGTFGTFLKSKDSNDGSEHALLVELEA 129 (213)
T ss_pred HHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Confidence 588999998776542 35567999999887643 2578888877643211 10 1 1355678999
Q ss_pred HHhhcC--CCCeEeecCCCccHHHHHHHHHHHHHH---hhcccc-CCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 82 LNEELA--TKSVLLGNGLRTSEADVIVFSAVHSFV---VGLANL-DQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 82 Ln~~L~--~rtyLvGnG~~~TlADI~l~~~l~~~~---~~~~~~-~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
||++|. ++.||+ |+++|+||++++..+.+.. ...... ....||+|.+|+++|.++|+|+..++
T Consensus 130 le~~L~~~~~~fl~--Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~ 198 (213)
T PLN02378 130 LENHLKSHDGPFIA--GERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKT 198 (213)
T ss_pred HHHHHhcCCCCCcC--CCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccC
Confidence 999998 478999 7899999999999976531 111111 23689999999999999999987754
No 40
>COG2517 Predicted RNA-binding protein containing a C-terminal EMAP domain [General function prediction only]
Probab=99.17 E-value=6.5e-11 Score=107.48 Aligned_cols=70 Identities=33% Similarity=0.457 Sum_probs=63.2
Q ss_pred ccceEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccccccccccceeeecc
Q 015335 250 LLNIQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGKLRDVMSEGLVLCAS 327 (408)
Q Consensus 250 ~ldirVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k~rGv~S~gMvLca~ 327 (408)
-++|.||.|.++.+||++|+||+|.||+|+- -++||++. .+..+|.+|+|+. |.||.|.|+.|+|| +|..
T Consensus 119 aV~~vvGEV~Sv~~hp~aD~L~v~vvn~G~r-~~tVVTN~-----~~vreg~~vaVAl-LPPr~F~gvvSeGM-Flg~ 188 (219)
T COG2517 119 AVDIVVGEVMSVGKHPNADKLLVTVVNIGGR-AVTVVTND-----LDVREGDRVAVAL-LPPRNFFGVVSEGM-FLGA 188 (219)
T ss_pred eEEEEeeeeeecccCCCCCceEEEEEecCCe-EEEEEecc-----cccccCCEEEEEe-cChhHhccccccce-eecc
Confidence 3889999999999999999999999999984 68999999 7889999987765 99999999999999 5544
No 41
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.13 E-value=1.4e-10 Score=98.46 Aligned_cols=94 Identities=24% Similarity=0.390 Sum_probs=72.9
Q ss_pred cHHHHHHHHHHHhcCCCC-----------------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPAD-----------------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAV 110 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~-----------------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l 110 (408)
+|+++++|++|..+.+.+ ...+.+.|+.||.+|..+.||+ |+++|+|||+++..+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~--G~~~siaDi~l~~~~ 78 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLV--GERLTLADIFVAGAL 78 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceec--cCCccHHHHHHHHHH
Confidence 478899999988664421 0355678999999999999999 679999999999888
Q ss_pred HHHHhh-ccccCCCCChhHHHHHHHHHhhHhhHhhhcccc
Q 015335 111 HSFVVG-LANLDQGKMPHVMRWMDYIQSKEALGDLFGTIS 149 (408)
Q Consensus 111 ~~~~~~-~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~~i~ 149 (408)
.+.... +.......||+|.+|++++.++|.|+..+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 79 LLGFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHHHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 764221 111124689999999999999999999876654
No 42
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.13 E-value=1.2e-10 Score=99.38 Aligned_cols=92 Identities=20% Similarity=0.285 Sum_probs=72.0
Q ss_pred cHHHHHHHHHHHhcCCCC----------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHh--
Q 015335 54 SNDEVMKWIEFAESFPAD----------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVV-- 115 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~----------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~-- 115 (408)
+|+++.+|++|..+.+.+ ...+.+.|+.||.+|..++||+ |+++|+|||+++..+.+...
T Consensus 3 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~t~ADi~l~~~~~~~~~~~ 80 (126)
T cd03185 3 ERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFG--GDTIGYVDIALGSFLGWFRAYE 80 (126)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCCcchHHHHHHHHHHHHHHHH
Confidence 588999999998654321 1456778999999999999999 67999999999998876421
Q ss_pred hcccc---CCCCChhHHHHHHHHHhhHhhHhhhcc
Q 015335 116 GLANL---DQGKMPHVMRWMDYIQSKEALGDLFGT 147 (408)
Q Consensus 116 ~~~~~---~~~~yP~I~RW~d~Vq~~p~~~~~~~~ 147 (408)
..... +...||++.+|+++|.++|.|+..++.
T Consensus 81 ~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 115 (126)
T cd03185 81 EVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPD 115 (126)
T ss_pred HHcCccccCcccCchHHHHHHHHHhccHHHHhCCC
Confidence 11111 357899999999999999999988654
No 43
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.13 E-value=7.7e-11 Score=97.45 Aligned_cols=69 Identities=26% Similarity=0.213 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
..+.+.++.||.+|.+++|++ |+++|+|||++++.+++... . .....||+|.||+++|.++|.|+...+
T Consensus 33 ~~~~~~l~~le~~l~~~~~l~--g~~~t~aDi~~~~~~~~~~~-~--~~~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 33 GSYDDVLAALEQALAKGPYLL--GERFTAADVLVGSPLGWGLQ-F--GLLPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred hhHHHHHHHHHHHHccCCccc--CCccCHHHHHHHHHHHHHHH-c--CCCCCChHHHHHHHHHHcCHHHHHHhc
Confidence 457789999999999999999 67999999999998876532 2 235789999999999999999988754
No 44
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.12 E-value=2.3e-10 Score=95.25 Aligned_cols=88 Identities=11% Similarity=0.057 Sum_probs=68.7
Q ss_pred cHHHHHHHHHHHhcCCCC----------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhc
Q 015335 54 SNDEVMKWIEFAESFPAD----------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGL 117 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~----------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~ 117 (408)
+|+++.+|++|..+.+.+ ...+.+.|..||.+|..+.||+ |+++|+|||+++..+... ..+
T Consensus 3 ~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~t~aDi~~~~~~~~~-~~~ 79 (107)
T cd03186 3 ARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFM--SEEFSLVDCALAPLLWRL-PAL 79 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCccc--CCCCcHHHHHHHHHHHHH-HHc
Confidence 588999999998664321 1356778999999999999999 679999999999987543 212
Q ss_pred cccCCCCChhHHHHHHHHHhhHhhHhh
Q 015335 118 ANLDQGKMPHVMRWMDYIQSKEALGDL 144 (408)
Q Consensus 118 ~~~~~~~yP~I~RW~d~Vq~~p~~~~~ 144 (408)
.-.....||++.+|+++|.++|+|+..
T Consensus 80 ~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 80 GIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred CCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 111124799999999999999999875
No 45
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.11 E-value=1.7e-10 Score=97.58 Aligned_cols=83 Identities=18% Similarity=0.303 Sum_probs=65.4
Q ss_pred ccHHHHHHHHHHHhcCCCCh-------------------------------HHHHHHHHHHHhhcCCCCeEeecCCCccH
Q 015335 53 SSNDEVMKWIEFAESFPADS-------------------------------KACFDVLIKLNEELATKSVLLGNGLRTSE 101 (408)
Q Consensus 53 ~erAeV~qWL~fa~s~~~~~-------------------------------~~~~~~L~~Ln~~L~~rtyLvGnG~~~Tl 101 (408)
.+|+++++|++|.++.+.+. ..+...|..||.+|.+++||+ |+++|+
T Consensus 6 ~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--Gd~~t~ 83 (119)
T cd03189 6 AEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFV--GDKLTA 83 (119)
T ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCC--CCCCCH
Confidence 46899999999876543210 245668899999999999999 679999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhH
Q 015335 102 ADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKE 139 (408)
Q Consensus 102 ADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p 139 (408)
|||+++..+.++. .. ......||+|.+|+++|.++|
T Consensus 84 ADi~l~~~~~~~~-~~-~~~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 84 ADIMMSFPLEAAL-AR-GPLLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHHHHHHHHH-Hc-CcccccCchHHHHHHHHhcCC
Confidence 9999998886542 22 225789999999999999876
No 46
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.09 E-value=2.6e-10 Score=97.63 Aligned_cols=71 Identities=14% Similarity=0.105 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhhc-CCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHh--hHhhHhhhcc
Q 015335 74 ACFDVLIKLNEEL-ATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQS--KEALGDLFGT 147 (408)
Q Consensus 74 ~~~~~L~~Ln~~L-~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~--~p~~~~~~~~ 147 (408)
.+.+.+..||.+| ..+.|++ |+++|+|||++|..+.+.. .........||+|.+|+++|.+ +|+|+.+.+-
T Consensus 49 ~~~~~l~~le~~l~~~~~~l~--Gd~~t~ADi~l~~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~~~ 122 (126)
T cd03183 49 NLEESLDLLENYFLKDKPFLA--GDEISIADLSAVCEIMQPE-AAGYDVFEGRPKLAAWRKRVKEAGNPLFDEAHKI 122 (126)
T ss_pred HHHHHHHHHHHHHhcCCCccc--CCCCCHHHHHHHHHHHHHH-hcCCcccccCchHHHHHHHHHHhcchhHHHHHHH
Confidence 4567899999984 5578999 6799999999998775432 2221125889999999999999 9999887653
No 47
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.09 E-value=1.4e-10 Score=95.82 Aligned_cols=80 Identities=28% Similarity=0.403 Sum_probs=62.5
Q ss_pred HHHHHHHHhcCCCC--------------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhc
Q 015335 58 VMKWIEFAESFPAD--------------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGL 117 (408)
Q Consensus 58 V~qWL~fa~s~~~~--------------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~ 117 (408)
++||++|..+.+.+ ...+.+.|+.||++|.+++|++ |+++|+|||+++..+.....
T Consensus 1 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--G~~~t~aDi~~~~~~~~~~~-- 76 (100)
T cd03206 1 VQRWLSVAAGEIANGPAAARLITLFGAPLDKETAIARAHRLLRLLEEHLAGRDWLA--GDRPTIADVAVYPYVALAPE-- 76 (100)
T ss_pred CceehhhhhhhcccchhHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHccCCccC--CCCCCHHHHHHHHHHHHHhc--
Confidence 36788888775532 0456678999999999999999 67999999999988854321
Q ss_pred cccCCCCChhHHHHHHHHHhhHhh
Q 015335 118 ANLDQGKMPHVMRWMDYIQSKEAL 141 (408)
Q Consensus 118 ~~~~~~~yP~I~RW~d~Vq~~p~~ 141 (408)
.......||+|.+|+++|.++|.|
T Consensus 77 ~~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 77 GGVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred cCCChhhCcHHHHHHHHHHhCcCC
Confidence 223467899999999999999875
No 48
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.08 E-value=8.2e-11 Score=97.18 Aligned_cols=77 Identities=25% Similarity=0.435 Sum_probs=57.6
Q ss_pred cHHHHHHHHHHHhcCCC---------------ChHHHHHHHHHHHhhcCCCC--eEeecCCCccHHHHHHHHHHHHHHhh
Q 015335 54 SNDEVMKWIEFAESFPA---------------DSKACFDVLIKLNEELATKS--VLLGNGLRTSEADVIVFSAVHSFVVG 116 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~---------------~~~~~~~~L~~Ln~~L~~rt--yLvGnG~~~TlADI~l~~~l~~~~~~ 116 (408)
.+++|++|++|.. ... ...++...|..||.+|..+. ||+ |++||+||+++|+.|....
T Consensus 5 ~~a~i~~W~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~--G~~~T~AD~~v~~~l~~~~-- 79 (99)
T PF14497_consen 5 WRALIDRWLDFSV-AFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLV--GDKPTLADIAVFGFLASLR-- 79 (99)
T ss_dssp THHHHHHHHH-GH-CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSS--SSS--HHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHhccc-hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeec--CCCCCHHHHHHHHHHHHHh--
Confidence 4789999999762 100 02577889999999999999 999 6689999999999986542
Q ss_pred ccccCC-CCChhHHHHHHHHHh
Q 015335 117 LANLDQ-GKMPHVMRWMDYIQS 137 (408)
Q Consensus 117 ~~~~~~-~~yP~I~RW~d~Vq~ 137 (408)
+. .. ..||||.||+++|++
T Consensus 80 ~~--~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 80 WA--DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp CC--HHTTTCHHHHHHHHHHHT
T ss_pred hc--ccccccHHHHHHHHhhcC
Confidence 22 12 699999999999974
No 49
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.08 E-value=3.1e-10 Score=95.53 Aligned_cols=84 Identities=19% Similarity=0.251 Sum_probs=65.4
Q ss_pred cHHHHHHHHHHHhcCCC--------------C---------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHH
Q 015335 54 SNDEVMKWIEFAESFPA--------------D---------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADV 104 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~--------------~---------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI 104 (408)
+|+++.+|++|..+.+. + ...+.+.|..||.+|+.+.|++ |+++|+|||
T Consensus 4 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~--gd~~t~aDi 81 (117)
T cd03182 4 ERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVA--GDRFTIADI 81 (117)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCccc--CCCCCHHHH
Confidence 58899999999644321 1 0356678999999999999999 679999999
Q ss_pred HHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHh
Q 015335 105 IVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEA 140 (408)
Q Consensus 105 ~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~ 140 (408)
++++.+.... .........||+|.+|+++|.++|+
T Consensus 82 ~l~~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~ 116 (117)
T cd03182 82 TAFVGLDFAK-VVKLRVPEELTHLRAWYDRMAARPS 116 (117)
T ss_pred HHHHHhHHHH-hcCCCCccccHHHHHHHHHHHhccC
Confidence 9999987542 2221224689999999999999986
No 50
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.07 E-value=4.9e-10 Score=109.45 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=90.5
Q ss_pred HHhCCCCCcccCCCC-----cccHHHHHHHHhcCCCc------ccHHHHHHHHHHHhcCC-C---C----hHHHHHHHHH
Q 015335 21 KHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSGK------SSNDEVMKWIEFAESFP-A---D----SKACFDVLIK 81 (408)
Q Consensus 21 kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~------~erAeV~qWL~fa~s~~-~---~----~~~~~~~L~~ 81 (408)
.|+.+||.+.+|.+. ..+..+|++||.+.++. .+++++.+|+....... . + ...+.+.|..
T Consensus 103 ~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~~~~era~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 182 (265)
T PLN02817 103 WFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPLATPPEKASVGSKIFSTFIGFLKSKDPGDGTEQALLDELTS 182 (265)
T ss_pred HHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
Confidence 378889998666542 34567999999887653 36999999986543211 1 1 1345678999
Q ss_pred HHhhcCC-CCeEeecCCCccHHHHHHHHHHHHHHhhc---cccC-CCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 82 LNEELAT-KSVLLGNGLRTSEADVIVFSAVHSFVVGL---ANLD-QGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 82 Ln~~L~~-rtyLvGnG~~~TlADI~l~~~l~~~~~~~---~~~~-~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
||++|.. +.||+ |+++|+|||+++..+..+...+ ...+ ...||+|.+|+++|.++|.|+..++
T Consensus 183 LE~~L~~~g~yl~--Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~ 250 (265)
T PLN02817 183 FDDYIKENGPFIN--GEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRA 250 (265)
T ss_pred HHHHHhcCCCeeC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCC
Confidence 9999974 68999 6799999999999886532111 1112 4689999999999999999998754
No 51
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.03 E-value=6.7e-10 Score=95.35 Aligned_cols=90 Identities=18% Similarity=0.313 Sum_probs=68.1
Q ss_pred cHHHHHHHHHHHhcCC----C------ChHHHHHHHHHHHhhcC---CCCeEeecCCCccHHHHHHHHHHHHHHh---hc
Q 015335 54 SNDEVMKWIEFAESFP----A------DSKACFDVLIKLNEELA---TKSVLLGNGLRTSEADVIVFSAVHSFVV---GL 117 (408)
Q Consensus 54 erAeV~qWL~fa~s~~----~------~~~~~~~~L~~Ln~~L~---~rtyLvGnG~~~TlADI~l~~~l~~~~~---~~ 117 (408)
.|+.|+|||+|...+. . +...+.+.+..||.+|. ++.|++ | ++|+|||++++.+.++.. ..
T Consensus 4 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~~~~fl~--G-~~tlADi~l~~~~~~~~~~~~~~ 80 (120)
T cd03203 4 KREFADELLAYTDAFTKALYSSLIKGDPSAEAAAALDYIENALSKFDDGPFFL--G-QFSLVDIAYVPFIERFQIFLSEL 80 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcCCCCCcC--C-CccHHHHHHHHHHHHHHHHHHHh
Confidence 5899999999932211 0 12456788999999997 488999 8 899999999998865321 11
Q ss_pred cccC-CCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 118 ANLD-QGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 118 ~~~~-~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
...+ ...||+|.+|+++|.++|.|+..++
T Consensus 81 ~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~ 110 (120)
T cd03203 81 FNYDITEGRPNLAAWIEEMNKIEAYTQTKQ 110 (120)
T ss_pred cCccccccCcHHHHHHHHHhcchHHHhHcC
Confidence 2223 3689999999999999999988754
No 52
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.99 E-value=1.5e-09 Score=89.36 Aligned_cols=78 Identities=21% Similarity=0.365 Sum_probs=61.9
Q ss_pred cHHHHHHHHHHHhcCCCC-------------------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPAD-------------------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFS 108 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~-------------------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~ 108 (408)
+|++++||++|.++.+.+ ...+.+.++.||.+|.+++|++ |+++|+|||++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--g~~~slaDi~~~~ 79 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLV--GDALTIADIALAA 79 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCcccc--CCCCCHHHHHHHH
Confidence 589999999998664421 1466778999999999899999 7899999999998
Q ss_pred HHHHHHhhccccCCCCChhHHHHHHHH
Q 015335 109 AVHSFVVGLANLDQGKMPHVMRWMDYI 135 (408)
Q Consensus 109 ~l~~~~~~~~~~~~~~yP~I~RW~d~V 135 (408)
.+.+. .. ...+...||+|.+|+++|
T Consensus 80 ~~~~~-~~-~~~~~~~~p~l~~~~~~~ 104 (105)
T cd03179 80 YTHVA-DE-GGFDLADYPAIRAWLARI 104 (105)
T ss_pred HHHhc-cc-cCCChHhCccHHHHHHhh
Confidence 88754 22 223467899999999986
No 53
>PRK10387 glutaredoxin 2; Provisional
Probab=98.97 E-value=1.5e-09 Score=100.81 Aligned_cols=99 Identities=14% Similarity=0.191 Sum_probs=74.9
Q ss_pred ccHHHHHHHHhcCCCc-----ccHHHHHHHHHHHhcCCC----C------------------------------------
Q 015335 37 KDIKTLYSDILKSSGK-----SSNDEVMKWIEFAESFPA----D------------------------------------ 71 (408)
Q Consensus 37 ~~l~~I~~~L~~~~G~-----~erAeV~qWL~fa~s~~~----~------------------------------------ 71 (408)
+++.+|++||.+.++. .+++.+.+|++|...... +
T Consensus 60 ~eS~aI~~yL~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (210)
T PRK10387 60 PESLDIVHYIDELDGKPLLTGKRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAH 139 (210)
T ss_pred cCHHHHHHHHHHhCCCccCCCcccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhc
Confidence 5677999999988754 368899999988743211 0
Q ss_pred ----hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhh
Q 015335 72 ----SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEAL 141 (408)
Q Consensus 72 ----~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~ 141 (408)
...+.+.|..||.+|.. .||+ |+++|+||++++..+.+... ... ...+|+|.+|+++|.++|++
T Consensus 140 ~~~~~~~~~~~l~~le~~L~~-~~l~--G~~~s~ADi~l~~~l~~~~~-~~~--~~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 140 TPGLIKEINADLRALDPLIVK-PNAV--NGELSTDDIHLFPILRNLTL-VKG--IEWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred CHHHHHHHHHHHHHHHHHhcC-cccc--CCCCCHHHHHHHHHHhccee-ecC--CCCCHHHHHHHHHHHHHhCC
Confidence 01344678999999986 9999 67999999999999876421 211 23579999999999999875
No 54
>TIGR02306 RNA_lig_DRB0094 RNA ligase, DRB0094 family. The member of this family from Deinococcus radiodurans, a species that withstands and recovers from extensive radiation or dessication damage, is an apparent RNA ligase. It repairs RNA stand breaks in nicked DNA:RNA and RNA:RNA but not DNA:DNA duplexes. It has adenylyltransferase activity associated with the C-terminal domain. Related proteins also in this family are found in Streptomyces avermitilis MA-4680 and in bacteriophage 44RR2.8t. The phage example is unsurprising since one mechanism of host cell defense against phage is cleavage and inactivation of certain tRNA molecules. A fungal sequence from Neurospora crassa scores between trusted and noise cutofffs and may be similar in function.
Probab=98.94 E-value=1.5e-09 Score=109.17 Aligned_cols=66 Identities=21% Similarity=0.244 Sum_probs=56.3
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEe-------------------------
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALIT------------------------- 307 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~------------------------- 307 (408)
.+||+|+++++||+||+|.+|+||. .|||||. +|...|.+|+++.
T Consensus 3 ~vv~kV~~i~php~Ad~L~v~~Vd~-----~~vV~ga-----~n~~~Gd~Vv~a~~gs~Lp~~~~~~~~~~~~~~~~~g~ 72 (341)
T TIGR02306 3 AVMREIADLQPHPNADALELATVGG-----WEVVVKK-----GEYRVGSDCVYFPEDSVLPTDAGLFRFLETRAKILDGK 72 (341)
T ss_pred eEEEEEEEeeecCCCCceEEEEEeC-----EEEEcCC-----CcCCCCCEEEEECCCCCCCCCCCcchhhcccccccccc
Confidence 3799999999999999999999997 8999999 5567888888875
Q ss_pred ---eccccccccccccceeeeccCC
Q 015335 308 ---NVKPGKLRDVMSEGLVLCASNE 329 (408)
Q Consensus 308 ---nlkp~k~rGv~S~gMvLca~~~ 329 (408)
.|+.++|||+.|+|| ||+..+
T Consensus 73 ~~~~Ik~~klRG~~SqGM-lcs~~~ 96 (341)
T TIGR02306 73 MRARVKTVRLRGEISQGI-ALPTGA 96 (341)
T ss_pred ccceEeEEEeccEEEccE-Eechhh
Confidence 356679999999999 676544
No 55
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=98.87 E-value=3.2e-09 Score=86.03 Aligned_cols=64 Identities=19% Similarity=0.273 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCC-CCChhHHHHHHHHHhhH
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQ-GKMPHVMRWMDYIQSKE 139 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~-~~yP~I~RW~d~Vq~~p 139 (408)
..+.+.|..||.+|.+++|++ |+++|+|||+++..+.+.. .+..... ..||+|.+|+++|.++|
T Consensus 31 ~~~~~~l~~le~~l~~~~~l~--G~~~t~ADi~~~~~~~~~~-~~~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 31 AKVPRYLEVLEKRLKGGPYLV--GDKLTIADIALFPMLDWLE-RLGPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHTSSSSS--BSS-CHHHHHHHHHHHHHH-HHTTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHcCCCeee--ccCCchhHHHHHHHHHHHH-HhCCCcccccCHHHHHHHHHHHcCC
Confidence 456778999999999999999 6799999999999998643 3333344 89999999999999987
No 56
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.85 E-value=4.5e-09 Score=89.84 Aligned_cols=67 Identities=22% Similarity=0.337 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhhcCCCC----------eEeecCCCccHHHHHHHHHHHHHHh-hcccc--CCCCChhHHHHHHHHHhhH
Q 015335 73 KACFDVLIKLNEELATKS----------VLLGNGLRTSEADVIVFSAVHSFVV-GLANL--DQGKMPHVMRWMDYIQSKE 139 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rt----------yLvGnG~~~TlADI~l~~~l~~~~~-~~~~~--~~~~yP~I~RW~d~Vq~~p 139 (408)
..+.+.|..||.+|..+. ||+ |+++|+|||++++.+++... .+... .+..||||.||+++|.++|
T Consensus 32 ~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~--Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~~rv~aRp 109 (111)
T cd03204 32 DELEMVLDQVEQELQRRKEETEEQKCQLWLC--GDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAYFERVLQRE 109 (111)
T ss_pred HHHHHHHHHHHHHHHcCCcccccccCCCccC--CCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHHHHHHHcCC
Confidence 466789999999998764 999 67999999999999876532 12111 1468999999999999998
Q ss_pred hh
Q 015335 140 AL 141 (408)
Q Consensus 140 ~~ 141 (408)
+|
T Consensus 110 sf 111 (111)
T cd03204 110 SF 111 (111)
T ss_pred CC
Confidence 75
No 57
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=98.85 E-value=6.9e-09 Score=91.58 Aligned_cols=72 Identities=19% Similarity=0.300 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhcCC----------------CCeEeecCCCccHHHHHHHHHHHHHHh---hccccC-CCCChhHHHHH
Q 015335 73 KACFDVLIKLNEELAT----------------KSVLLGNGLRTSEADVIVFSAVHSFVV---GLANLD-QGKMPHVMRWM 132 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~----------------rtyLvGnG~~~TlADI~l~~~l~~~~~---~~~~~~-~~~yP~I~RW~ 132 (408)
..+...|+.||++|.+ +.||+ |+++|+||++++..++.+.. ...... ...||||.||+
T Consensus 32 ~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~--Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P~L~aw~ 109 (134)
T cd03198 32 KGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLD--GDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLTGLWRYL 109 (134)
T ss_pred HHHHHHHHHHHHHHccCccccccccccccccCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCHHHHHHH
Confidence 4566789999999987 67999 77999999999999875421 001223 37899999999
Q ss_pred HHHHhhHhhHhhhc
Q 015335 133 DYIQSKEALGDLFG 146 (408)
Q Consensus 133 d~Vq~~p~~~~~~~ 146 (408)
++|.++|+|+..++
T Consensus 110 ~ri~aRPsfk~t~~ 123 (134)
T cd03198 110 KNAYQREEFTNTCP 123 (134)
T ss_pred HHHHCCHHHHHHcC
Confidence 99999999998854
No 58
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=98.85 E-value=7.2e-09 Score=99.70 Aligned_cols=125 Identities=16% Similarity=0.208 Sum_probs=86.3
Q ss_pred HHHhCCCCCcccCCCC-----cccHHHHHHHHhcCCCc---c-----c---HHH-HHHHHHHHh---cCCCC-----hHH
Q 015335 20 CKHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSGK---S-----S---NDE-VMKWIEFAE---SFPAD-----SKA 74 (408)
Q Consensus 20 ~kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~---~-----e---rAe-V~qWL~fa~---s~~~~-----~~~ 74 (408)
-.|+++||.+.+|++. ..++..|++||...++. + + ++. ++-|..|.. +.-.. ...
T Consensus 48 ~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 127 (236)
T TIGR00862 48 EDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESNTAGLDIFAKFSAYIKNSNPEANDNLEKG 127 (236)
T ss_pred HHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3578889998666432 46677999999877642 1 1 222 112222221 11000 134
Q ss_pred HHHHHHHHHhhcC------------------CCCeEeecCCCccHHHHHHHHHHHHHHh---hccccC-CCCChhHHHHH
Q 015335 75 CFDVLIKLNEELA------------------TKSVLLGNGLRTSEADVIVFSAVHSFVV---GLANLD-QGKMPHVMRWM 132 (408)
Q Consensus 75 ~~~~L~~Ln~~L~------------------~rtyLvGnG~~~TlADI~l~~~l~~~~~---~~~~~~-~~~yP~I~RW~ 132 (408)
+.+.|+.||++|. .+.||+ |+++|+||++++..++..-. .....+ ...||+|.+|+
T Consensus 128 l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~--Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~ 205 (236)
T TIGR00862 128 LLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLD--GDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYL 205 (236)
T ss_pred HHHHHHHHHHHHhccccccccccccccccccCCCccc--CCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHH
Confidence 6789999999997 578999 78999999999999976521 122344 68999999999
Q ss_pred HHHHhhHhhHhhhc
Q 015335 133 DYIQSKEALGDLFG 146 (408)
Q Consensus 133 d~Vq~~p~~~~~~~ 146 (408)
+++.+++.|+..++
T Consensus 206 ~~~~~~~sf~~t~p 219 (236)
T TIGR00862 206 SNAYAREEFTNTCP 219 (236)
T ss_pred HHHhccchHHhhCC
Confidence 99999999998754
No 59
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=98.83 E-value=1.4e-08 Score=86.89 Aligned_cols=71 Identities=10% Similarity=0.174 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhcc
Q 015335 74 ACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFGT 147 (408)
Q Consensus 74 ~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~~ 147 (408)
.+...+..||.+|.++.||+ |+++|+||++++..+.+.. .+.......||+|.+|+++|.++|.++..++.
T Consensus 39 ~~~~~l~~le~~L~~~~~l~--G~~~T~aDi~l~~~~~~~~-~~~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~ 109 (121)
T cd03209 39 KLPDKLKLFSDFLGDRPWFA--GDKITYVDFLLYEALDQHR-IFEPDCLDAFPNLKDFLERFEALPKISAYMKS 109 (121)
T ss_pred HHHHHHHHHHHHhCCCCCcC--CCCccHHHHHHHHHHHHHH-HhCccccccChHHHHHHHHHHHCHHHHHHHhc
Confidence 45678999999999999999 6799999999998887643 22223467899999999999999999998753
No 60
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=98.82 E-value=9e-09 Score=88.38 Aligned_cols=91 Identities=14% Similarity=0.237 Sum_probs=69.2
Q ss_pred cHHHHHHHHHHHhcCCC--------------ChHHHHHHHHHHHhhcCC--CCeEeecCCCccHHHHHHHHHHHHHHhhc
Q 015335 54 SNDEVMKWIEFAESFPA--------------DSKACFDVLIKLNEELAT--KSVLLGNGLRTSEADVIVFSAVHSFVVGL 117 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~--------------~~~~~~~~L~~Ln~~L~~--rtyLvGnG~~~TlADI~l~~~l~~~~~~~ 117 (408)
+||....|++|.++.+. ....+.+.|..||.+|.+ .+|++ |+++|+|||+++..+.+.....
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~--G~~~t~aDi~~~~~~~~~~~~~ 79 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYKLLGAPSDREEKKAELRSALENLEEELTKRGTPFFG--GDSPGMVDYMIWPWFERLEALK 79 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHHHHhccccchhhHHHHHHHHHHHHHHHHhcCCCCcC--CCCccHHHHHhhHHHHHHHHHH
Confidence 36777888888754322 125677789999999985 78999 6799999999998886532111
Q ss_pred c----ccCCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 118 A----NLDQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 118 ~----~~~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
. ......||+|.+|+++|.++|.++..+.
T Consensus 80 ~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~ 112 (124)
T cd03184 80 LLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYT 112 (124)
T ss_pred hhccccCCcccChHHHHHHHHhccChHHHHHhC
Confidence 0 1246789999999999999999988864
No 61
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.81 E-value=8.7e-09 Score=96.67 Aligned_cols=112 Identities=15% Similarity=0.237 Sum_probs=78.7
Q ss_pred hCCCCCcccCCCC------cccHHHHHHHHhcCCCc-----ccHHHHHHHHHHHhcCCC----C----------------
Q 015335 23 LSLDHKDFSSNAA------EKDIKTLYSDILKSSGK-----SSNDEVMKWIEFAESFPA----D---------------- 71 (408)
Q Consensus 23 l~Lnp~~v~~~~~------~~~l~~I~~~L~~~~G~-----~erAeV~qWL~fa~s~~~----~---------------- 71 (408)
+.+||.+.+|.+. ..+...|++||.+.++. .+++++.+|+.|....+. +
T Consensus 39 ~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (209)
T TIGR02182 39 IRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPLLTGKVSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSAR 118 (209)
T ss_pred HHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCccCCCCChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHH
Confidence 4556655444321 34567999999988753 257899999977433210 0
Q ss_pred ---------------------h---HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCCh-
Q 015335 72 ---------------------S---KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMP- 126 (408)
Q Consensus 72 ---------------------~---~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP- 126 (408)
. ..+.+.|+.||.+|.+++|+. | .+|+|||++++.+.+. ..+. ...+|
T Consensus 119 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~--g-~~TiADi~l~~~l~~~-~~~~---~~~~p~ 191 (209)
T TIGR02182 119 KYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAVN--G-ELSEDDILVFPLLRNL-TLVA---GINWPS 191 (209)
T ss_pred HHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCccccC--C-CCCHHHHHHHHHhcCe-eeec---CCCCCh
Confidence 0 235668999999999999995 5 5999999999998753 2111 12377
Q ss_pred hHHHHHHHHHhhHhh
Q 015335 127 HVMRWMDYIQSKEAL 141 (408)
Q Consensus 127 ~I~RW~d~Vq~~p~~ 141 (408)
||.+|+++|.+++.+
T Consensus 192 ~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 192 RVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999864
No 62
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.78 E-value=2.4e-08 Score=84.95 Aligned_cols=86 Identities=9% Similarity=-0.017 Sum_probs=66.5
Q ss_pred cHHHHHHHHHHHhcCCCC-----------------------hHHHHHHHHHHHhhcC-CCCeEeecCCCccHHHHHHHHH
Q 015335 54 SNDEVMKWIEFAESFPAD-----------------------SKACFDVLIKLNEELA-TKSVLLGNGLRTSEADVIVFSA 109 (408)
Q Consensus 54 erAeV~qWL~fa~s~~~~-----------------------~~~~~~~L~~Ln~~L~-~rtyLvGnG~~~TlADI~l~~~ 109 (408)
+|+++.+|+.|..+.+.+ ...+.+.+..||.+|. ++.||+ | .+|+||++++..
T Consensus 3 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~--G-~fSiAD~~l~~~ 79 (114)
T cd03195 3 QRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLF--G-EWCIADTDLALM 79 (114)
T ss_pred hhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCccc--C-CccHHHHHHHHH
Confidence 588999999998664431 1355778899999995 558999 7 599999999988
Q ss_pred HHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 110 VHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 110 l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
+.+. ... ..+.. |+|.+|+++|.++|+|+..++
T Consensus 80 ~~~~-~~~-g~~l~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 80 LNRL-VLN-GDPVP--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHH-HHc-CCCCC--HHHHHHHHHHHCCHHHHHHHh
Confidence 8754 222 23333 999999999999999998754
No 63
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=98.77 E-value=2.6e-08 Score=85.90 Aligned_cols=71 Identities=17% Similarity=0.214 Sum_probs=57.5
Q ss_pred HHHHHHHHHHhhcCC---CCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhcc
Q 015335 74 ACFDVLIKLNEELAT---KSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFGT 147 (408)
Q Consensus 74 ~~~~~L~~Ln~~L~~---rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~~ 147 (408)
.+.+.|..||.+|.. +.||+ |+++|+||++++..+.+.. .........||+|.+|+++|.++|.|+..+..
T Consensus 39 ~~~~~l~~le~~L~~~~~~~~l~--G~~~T~ADi~l~~~~~~~~-~~~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~ 112 (126)
T cd03210 39 DLPEQLKPFEKLLSKNNGKGFIV--GDKISFADYNLFDLLDIHL-VLAPGCLDAFPLLKAFVERLSARPKLKAYLES 112 (126)
T ss_pred HHHHHHHHHHHHHHhCCCCCeee--CCCccHHHHHHHHHHHHHH-HhChHhhhcChHHHHHHHHHHhCcHHHHHHhC
Confidence 466789999999974 58999 6799999999998886542 22223467899999999999999999998753
No 64
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=98.72 E-value=3.2e-08 Score=87.16 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhhcC--CCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhcc
Q 015335 74 ACFDVLIKLNEELA--TKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFGT 147 (408)
Q Consensus 74 ~~~~~L~~Ln~~L~--~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~~ 147 (408)
.+.+.|..||.+|. ++.||+ |+++|+||++++..+.++.. ........||+|.+|+++|.++|+++..+..
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~--G~~~T~ADi~l~~~l~~~~~-~~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~ 115 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLV--GNKLSRADIHLLEAILMVEE-LDPSLLSDFPLLQAFKTRISNLPTIKKFLQP 115 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeee--CCCCCHHHHHHHHHHHHHHH-hchhhhccChHHHHHHHHHHcCHHHHHHHhc
Confidence 34678999999998 678999 67999999999998876422 2223467899999999999999999998764
No 65
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=98.64 E-value=5.3e-08 Score=84.06 Aligned_cols=72 Identities=19% Similarity=0.253 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhhcCC-CCeEeecCCCccHHHHHHHHHHHHHHhhcc---cc-CCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 73 KACFDVLIKLNEELAT-KSVLLGNGLRTSEADVIVFSAVHSFVVGLA---NL-DQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~-rtyLvGnG~~~TlADI~l~~~l~~~~~~~~---~~-~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
+.+.+.|..||.+|.+ +.||+ |+++|+|||+++..++.+..... .. ....||+|.||+++|.++|.|+..++
T Consensus 33 ~~l~~~l~~Le~~L~~~~~fl~--Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~~ 109 (121)
T cd03201 33 QALLDELEALEDHLKENGPFIN--GEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTKA 109 (121)
T ss_pred HHHHHHHHHHHHHHhcCCCccC--CCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcCC
Confidence 4566788999999984 78999 67999999999997765421111 11 23799999999999999999988754
No 66
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=98.60 E-value=5.8e-08 Score=74.60 Aligned_cols=60 Identities=20% Similarity=0.197 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccc-cCCCCChhHHHHHHH
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLAN-LDQGKMPHVMRWMDY 134 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~-~~~~~yP~I~RW~d~ 134 (408)
..+...|+.||.+|..++||+ |++||+||+.++..+.++...... .....||+|.+|+++
T Consensus 9 ~~~~~~l~~le~~L~~~~fl~--G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 9 AQLEAALDALEDHLADGPFLF--GDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHTTSSBTT--BSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCC--CCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 356778999999999999999 679999999999999875332111 225899999999986
No 67
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.56 E-value=1.4e-07 Score=75.90 Aligned_cols=60 Identities=25% Similarity=0.337 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhcccc--CCCCChhHHHHHHHH
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANL--DQGKMPHVMRWMDYI 135 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~--~~~~yP~I~RW~d~V 135 (408)
..+.+.++.||++|..+.|++ |+++|+||++++..+.+... .... ....||++.+|+++|
T Consensus 39 ~~~~~~~~~l~~~L~~~~~~~--g~~~t~aDi~~~~~l~~~~~-~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 39 EELAAALAALEKLLAGRPYLA--GDRFSLADIALAPVLARLDL-LGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHccCCCCC--CCCcCHHHHHHHHHHHHHHH-hhhhhhhhccCccHHHHHHhC
Confidence 466779999999999999999 67999999999999976532 2222 157899999999874
No 68
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.52 E-value=2e-07 Score=80.55 Aligned_cols=62 Identities=19% Similarity=0.176 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccC-CCCChhHHHHHHHHHh
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLD-QGKMPHVMRWMDYIQS 137 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~-~~~yP~I~RW~d~Vq~ 137 (408)
..+.+.|..||++|.++.||+ |+++|+||++++..+.+.. ...... ...||||.+|+++|++
T Consensus 61 ~~~~~~l~~l~~~L~~~~fl~--Gd~~t~AD~~l~~~l~~~~-~~~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 61 ANFRAALEPLRATLKGQPFLG--GAAPNYADYIVFGGFQWAR-IVSPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHHcCCCccC--CCCCchhHHHHHHHHHHHH-HcCcccccccCChHHHHHHHHhc
Confidence 467789999999999999999 7899999999999987643 222233 4789999999999976
No 69
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.49 E-value=2.2e-07 Score=74.91 Aligned_cols=61 Identities=23% Similarity=0.355 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhh-ccc----cCCCCChhHHHHHHHH
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVG-LAN----LDQGKMPHVMRWMDYI 135 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~-~~~----~~~~~yP~I~RW~d~V 135 (408)
..+.+.+..||++|.+++|++ |+++|+|||++++.+.++... +.. .....||+|.+|+++|
T Consensus 22 ~~~~~~l~~le~~L~~~~yl~--Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~ 87 (88)
T cd03193 22 SLAKKDLKALSDLLGDKKFFF--GDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERI 87 (88)
T ss_pred HHHHHHHHHHHHHhCCCCccC--CCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHh
Confidence 467789999999999999999 679999999999998765321 111 1246799999999987
No 70
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.42 E-value=3.4e-07 Score=75.54 Aligned_cols=60 Identities=23% Similarity=0.252 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhhcCC--CCeEeecCCCccHHHHHHHHHHHHHHhhccccC-CCCChhHHHHHHHH
Q 015335 73 KACFDVLIKLNEELAT--KSVLLGNGLRTSEADVIVFSAVHSFVVGLANLD-QGKMPHVMRWMDYI 135 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~--rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~-~~~yP~I~RW~d~V 135 (408)
..+.+.+..||.+|.+ ++|++ |+++|+||++++..+.+.. ...... ...||+|.+|+++|
T Consensus 42 ~~~~~~l~~le~~l~~~~~~~~~--G~~~s~aDi~l~~~~~~~~-~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 42 EAIPKYLKKLEKILKENGGGYLV--GDKLTWADLVVFDVLDYLL-YLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HhhHHHHHHHHHHHHHcCCCeee--CCCccHHHHHHHHHHHHHH-hhCchhhHHhChhHHHHHHhC
Confidence 3556789999999987 88999 6799999999999987642 232333 67899999999874
No 71
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.41 E-value=7e-07 Score=76.04 Aligned_cols=65 Identities=20% Similarity=0.195 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhhc---CCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhh
Q 015335 74 ACFDVLIKLNEEL---ATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLF 145 (408)
Q Consensus 74 ~~~~~L~~Ln~~L---~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~ 145 (408)
.+.+.+..||..| .+++||+ |+ +|+||++++..+.+.. .. ..+ .+|+|.+|+++|.++|.|+..+
T Consensus 45 ~~~~~~~~le~~l~~~~~~~yl~--Gd-~T~ADi~l~~~~~~~~-~~-~~~--~~P~l~~~~~rv~~rPsv~~~~ 112 (114)
T cd03194 45 DIARIEAIWAECLARFQGGPFLF--GD-FSIADAFFAPVVTRFR-TY-GLP--LSPAAQAYVDALLAHPAMQEWI 112 (114)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCC--CC-CcHHHHHHHHHHHHHH-Hc-CCC--CCHHHHHHHHHHHCCHHHHHHH
Confidence 3444555555554 5778999 78 9999999998887652 22 222 2499999999999999998864
No 72
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=98.36 E-value=3.1e-07 Score=95.66 Aligned_cols=91 Identities=23% Similarity=0.349 Sum_probs=67.4
Q ss_pred CCc-ccHHHHHHHHHHHhcCCCChHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccc-cCCCCChh
Q 015335 50 SGK-SSNDEVMKWIEFAESFPADSKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLAN-LDQGKMPH 127 (408)
Q Consensus 50 ~G~-~erAeV~qWL~fa~s~~~~~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~-~~~~~yP~ 127 (408)
+|. .++++|+.|++|+.. ....++...+..|+.+|..+|||+ |.++|+||+++|++++..-..+.. .....|-|
T Consensus 69 f~~~~d~~~vd~w~~~s~~--~~~~~~s~~~~~ld~~l~~~t~lv--g~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~ 144 (712)
T KOG1147|consen 69 FGNNIDRSQVDHWVSFSST--FSFDEISSSLSELDKFLVLRTFLV--GNSLSIADFAIWGALHSNGMRQEQLKAKKDYQN 144 (712)
T ss_pred cCCcccHHHHHHHHHHhhh--cchHHHHHHHHHHHhhhhHHHHhh--ccchhHHHHHHHHHHhcccchHHHHHhhCCchh
Confidence 344 589999999999976 334567788999999999999999 569999999999999873111111 12357889
Q ss_pred HHHHHHHHHhhHhhHhh
Q 015335 128 VMRWMDYIQSKEALGDL 144 (408)
Q Consensus 128 I~RW~d~Vq~~p~~~~~ 144 (408)
|.|||+.....++.+..
T Consensus 145 v~Rw~~~~~~~~a~~~v 161 (712)
T KOG1147|consen 145 VERWYDLPEFQEAHNKV 161 (712)
T ss_pred hhhhcCcHhHHHHHHHH
Confidence 99999954444444333
No 73
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.31 E-value=7.8e-07 Score=73.19 Aligned_cols=58 Identities=21% Similarity=0.170 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhcccc-CCCCChhHHHHHHHH
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANL-DQGKMPHVMRWMDYI 135 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~-~~~~yP~I~RW~d~V 135 (408)
..+.+.|..||.+|.+++| +++|+|||++++.+.++....... ....||||.||+++|
T Consensus 40 ~~~~~~l~~le~~L~~~~~-----d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 40 GKIERALDALEAELAKLPL-----DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHhhhhCCC-----CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 4667799999999999888 379999999999987653211122 257899999999875
No 74
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.14 E-value=8.8e-06 Score=74.55 Aligned_cols=124 Identities=9% Similarity=0.009 Sum_probs=94.9
Q ss_pred HHHhCCCCCcccCCCC-----cccHHHHHHHHhcCCCc--------ccHHHHHHHHHHHhcCCCCh--------------
Q 015335 20 CKHLSLDHKDFSSNAA-----EKDIKTLYSDILKSSGK--------SSNDEVMKWIEFAESFPADS-------------- 72 (408)
Q Consensus 20 ~kyl~Lnp~~v~~~~~-----~~~l~~I~~~L~~~~G~--------~erAeV~qWL~fa~s~~~~~-------------- 72 (408)
.+|-++||...+|++. ..++.+|.+||=+.+-. .-||.+.+-.+...+.+.+.
T Consensus 47 ~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~ 126 (217)
T KOG0868|consen 47 SEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPDPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEP 126 (217)
T ss_pred hHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhccccc
Confidence 3688999998666543 46677999999776632 13777777777666665441
Q ss_pred --------HHHHHHHHHHHhhcCC--CCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhH
Q 015335 73 --------KACFDVLIKLNEELAT--KSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALG 142 (408)
Q Consensus 73 --------~~~~~~L~~Ln~~L~~--rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~ 142 (408)
.-+...+..||.-|.. ..|.+ |+.+|+||+++...++.. ..+ ..+...||-|.|-.+.++..|+|+
T Consensus 127 ~~~~~W~q~~ItkGF~ALEklL~~~aGkycv--GDevtiADl~L~pqv~nA-~rf-~vdl~PYPti~ri~e~l~elpaFq 202 (217)
T KOG0868|consen 127 GYGDQWAQHFITKGFTALEKLLKSHAGKYCV--GDEVTIADLCLPPQVYNA-NRF-HVDLTPYPTITRINEELAELPAFQ 202 (217)
T ss_pred chhhHHHHHHHHHhHHHHHHHHHHccCCccc--Cceeehhhhccchhhhhh-hhc-cccCCcCchHHHHHHHHHhCHHHH
Confidence 2345678888888875 46999 789999999999999876 333 478899999999999999999999
Q ss_pred hhhcc
Q 015335 143 DLFGT 147 (408)
Q Consensus 143 ~~~~~ 147 (408)
.+.+.
T Consensus 203 ~ahP~ 207 (217)
T KOG0868|consen 203 AAHPD 207 (217)
T ss_pred hcCCC
Confidence 88654
No 75
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.14 E-value=8.9e-06 Score=77.79 Aligned_cols=124 Identities=14% Similarity=0.191 Sum_probs=88.7
Q ss_pred HhCCCCCc-ccCCCC-----cccHHHHHHHHhcCC--Cc-------ccHHHHHHHHHHHhcCCC---C------------
Q 015335 22 HLSLDHKD-FSSNAA-----EKDIKTLYSDILKSS--GK-------SSNDEVMKWIEFAESFPA---D------------ 71 (408)
Q Consensus 22 yl~Lnp~~-v~~~~~-----~~~l~~I~~~L~~~~--G~-------~erAeV~qWL~fa~s~~~---~------------ 71 (408)
||.+||-| .+|.+. ...+.-|++||=+.+ |. .+||+..-|++|...... .
T Consensus 49 ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~ 128 (231)
T KOG0406|consen 49 LLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQE 128 (231)
T ss_pred HHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHH
Confidence 45677444 344332 344557889984443 22 269999999999873211 0
Q ss_pred --hHHHHHHHHHHHhhcC-CCCeEeecCCCccHHHHHHHHHHHHHHhh---cc---ccCCCCChhHHHHHHHHHhhHhhH
Q 015335 72 --SKACFDVLIKLNEELA-TKSVLLGNGLRTSEADVIVFSAVHSFVVG---LA---NLDQGKMPHVMRWMDYIQSKEALG 142 (408)
Q Consensus 72 --~~~~~~~L~~Ln~~L~-~rtyLvGnG~~~TlADI~l~~~l~~~~~~---~~---~~~~~~yP~I~RW~d~Vq~~p~~~ 142 (408)
..++.+.|..||..|. +.+|+. |++++..||+++.++.++... +. ...-..||.|.+|+++|.+++.++
T Consensus 129 ~~~~e~~e~l~~lE~el~k~k~~fg--G~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~ 206 (231)
T KOG0406|consen 129 AAKEELREALKVLEEELGKGKDFFG--GETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVK 206 (231)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCC--CCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHH
Confidence 1357789999999999 889998 689999999999777765321 11 123579999999999999999998
Q ss_pred hhhcc
Q 015335 143 DLFGT 147 (408)
Q Consensus 143 ~~~~~ 147 (408)
..++.
T Consensus 207 ~~~p~ 211 (231)
T KOG0406|consen 207 AVLPD 211 (231)
T ss_pred hhcCC
Confidence 88654
No 76
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=98.13 E-value=1.3e-05 Score=77.32 Aligned_cols=73 Identities=23% Similarity=0.375 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhcCC----CCeEeecCCCccHHHHHHHHHHHHH-Hhhcccc--CCCCChhHHHHHHHHHhhHhhHhhhc
Q 015335 74 ACFDVLIKLNEELAT----KSVLLGNGLRTSEADVIVFSAVHSF-VVGLANL--DQGKMPHVMRWMDYIQSKEALGDLFG 146 (408)
Q Consensus 74 ~~~~~L~~Ln~~L~~----rtyLvGnG~~~TlADI~l~~~l~~~-~~~~~~~--~~~~yP~I~RW~d~Vq~~p~~~~~~~ 146 (408)
.+...|...|+.|.. .+||+ |+.+|+|||.+...||+. +-.+... .-.+.||+..||.+++.|+.|.++++
T Consensus 209 ~l~~~Ld~VEteLe~r~~~~~wL~--G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg 286 (325)
T KOG4420|consen 209 ELAMVLDQVETELEKRKLCELWLC--GCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFRKVLG 286 (325)
T ss_pred HHHHHHHHHHHHHhhccccceeec--cccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHHHhhh
Confidence 445577888888887 78999 679999999999999985 2233222 23589999999999999999999987
Q ss_pred cc
Q 015335 147 TI 148 (408)
Q Consensus 147 ~i 148 (408)
.+
T Consensus 287 ~~ 288 (325)
T KOG4420|consen 287 DI 288 (325)
T ss_pred hH
Confidence 54
No 77
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.11 E-value=3.3e-06 Score=74.66 Aligned_cols=82 Identities=18% Similarity=0.246 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhcCCC-C---hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHh-hccc----cCCCCC
Q 015335 55 NDEVMKWIEFAESFPA-D---SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVV-GLAN----LDQGKM 125 (408)
Q Consensus 55 rAeV~qWL~fa~s~~~-~---~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~-~~~~----~~~~~y 125 (408)
+.++.+|+++....-. . .....+.|..|+..|.++.|+. |+++|.+|+.+|+.+..... .+.. ....+|
T Consensus 45 ~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~L~~~~~~~--Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~ 122 (137)
T cd03212 45 RLQLTRGFSPLDSETEVEAEIYRDAKECLNLLSQRLGESQFFF--GDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQC 122 (137)
T ss_pred HHHHhcCCChhhhhhhhHHHHHHHHHHHHHHHHHHHCCCCcCC--CCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHC
Confidence 4566667665432111 1 2455678999999999999999 67999999999999876542 2211 125789
Q ss_pred hhHHHHHHHHHhh
Q 015335 126 PHVMRWMDYIQSK 138 (408)
Q Consensus 126 P~I~RW~d~Vq~~ 138 (408)
|||.+|+++|.+.
T Consensus 123 pnL~~~~~ri~~~ 135 (137)
T cd03212 123 PNLCRFCDRILSL 135 (137)
T ss_pred cHHHHHHHHHHHh
Confidence 9999999999863
No 78
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.08 E-value=5.8e-06 Score=74.20 Aligned_cols=52 Identities=15% Similarity=0.261 Sum_probs=41.1
Q ss_pred hhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhcccc-CCCCChhHHHHHHHHHhh
Q 015335 84 EELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANL-DQGKMPHVMRWMDYIQSK 138 (408)
Q Consensus 84 ~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~-~~~~yP~I~RW~d~Vq~~ 138 (408)
..+.++.|++ |++||||||++|++|... ..+... +...||+|.+||++|.+.
T Consensus 94 ~~~~~~~Fla--Gd~ptIADisvyg~l~s~-e~~~~~~Dl~~~p~I~~W~eRm~~~ 146 (149)
T cd03197 94 ALGKDRQFHG--GSKPNLADLAVYGVLRSV-EGHPAFKDMVEETKIGEWYERMDAA 146 (149)
T ss_pred HhcCCCCccC--CCCCCHHHHHHHHHHHHH-HHhccccchhhCcCHHHHHHHHHHH
Confidence 3334578999 689999999999999764 333344 788999999999999873
No 79
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=97.98 E-value=6.7e-06 Score=71.50 Aligned_cols=61 Identities=18% Similarity=0.305 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhh-cc----ccCCCCChhHHHHHHHH
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVG-LA----NLDQGKMPHVMRWMDYI 135 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~-~~----~~~~~~yP~I~RW~d~V 135 (408)
......|+.|++.|.++.||. |++||.+|+++|+.+..+... +. ......||||.+|+++|
T Consensus 60 ~~~~~~l~aLs~~Lg~~~~l~--Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 60 EEVDQCCQALSQRLGTQPYFF--GDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRI 125 (126)
T ss_pred HHHHHHHHHHHHHHCCCCCCC--CCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhc
Confidence 345668999999999999999 789999999999998765321 11 11256899999999987
No 80
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=4.3e-05 Score=72.24 Aligned_cols=109 Identities=12% Similarity=0.146 Sum_probs=78.8
Q ss_pred ccHHHHHHHHhcCCCc---c--cHHHHH----HHHHHHhcCC-C---------Ch--------HHHHHHHHHHHhhcC--
Q 015335 37 KDIKTLYSDILKSSGK---S--SNDEVM----KWIEFAESFP-A---------DS--------KACFDVLIKLNEELA-- 87 (408)
Q Consensus 37 ~~l~~I~~~L~~~~G~---~--erAeV~----qWL~fa~s~~-~---------~~--------~~~~~~L~~Ln~~L~-- 87 (408)
.-+.+|++||+..+|. . |++.|+ |.-+|..... . .. ......+..++..|.
T Consensus 63 ~QS~AI~RyLArk~gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~ 142 (206)
T KOG1695|consen 63 VQSRAILRYLARKFGLAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKN 142 (206)
T ss_pred ccHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhC
Confidence 3366999999998864 2 455543 4444443311 0 00 134568889999998
Q ss_pred CCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhHhhhcc
Q 015335 88 TKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALGDLFGT 147 (408)
Q Consensus 88 ~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~~~~~~ 147 (408)
.+.||+ |+++|.||+.++..+......+.+.....||++..|..+|.++|.++..++.
T Consensus 143 ~sgflv--Gd~lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~ 200 (206)
T KOG1695|consen 143 KSGFLV--GDKLTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIPNIKKYLES 200 (206)
T ss_pred CCCeee--cCcccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCchHHHHHhc
Confidence 457999 6799999999999998764334455567889999999999999999988764
No 81
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.82 E-value=1.9e-05 Score=76.84 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHhcCCCC-----------------hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhc
Q 015335 55 NDEVMKWIEFAESFPAD-----------------SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGL 117 (408)
Q Consensus 55 rAeV~qWL~fa~s~~~~-----------------~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~ 117 (408)
|.+|+.|.+|.-..+-+ ...+.+.|+.||..|+.+.||+ |+++|-||+-+|.+|.++-...
T Consensus 173 r~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~--Gd~lTEAD~RLftTlvRFD~VY 250 (324)
T COG0435 173 RTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEAVKKLFEALDKLEQILSERRYLT--GDQLTEADIRLFTTLVRFDPVY 250 (324)
T ss_pred HHHHHHHHhhhcccccCceeeecccchHHHHHHHHHHHHHHHHHHHHHhhcCeeec--cccchHhhhhhhheeEeecceE
Confidence 89999999987443321 1466778999999999999999 7899999999999997642211
Q ss_pred cc------cCCCCChhHHHHHHHHHhhHhhHhhh
Q 015335 118 AN------LDQGKMPHVMRWMDYIQSKEALGDLF 145 (408)
Q Consensus 118 ~~------~~~~~yP~I~RW~d~Vq~~p~~~~~~ 145 (408)
-. .....||||..|+..+-..|+|+...
T Consensus 251 vgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~ 284 (324)
T COG0435 251 VGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETV 284 (324)
T ss_pred EeeeecccchhhcCchHHHHHHHHhcCccccccc
Confidence 11 12357999999999999999998863
No 82
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.27 E-value=0.00014 Score=70.38 Aligned_cols=88 Identities=14% Similarity=0.229 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhcCCCC-----------------hHHHHHHHHHHHhhcCCCC--eEeecCCCccHHHHHHHHHHHHHHh
Q 015335 55 NDEVMKWIEFAESFPAD-----------------SKACFDVLIKLNEELATKS--VLLGNGLRTSEADVIVFSAVHSFVV 115 (408)
Q Consensus 55 rAeV~qWL~fa~s~~~~-----------------~~~~~~~L~~Ln~~L~~rt--yLvGnG~~~TlADI~l~~~l~~~~~ 115 (408)
+++|+.|-+|.-..+-. ...+.+.|+.+|+.|..+. |++ |+++|.|||.+|.++-++-.
T Consensus 171 ~~~Ide~N~wvy~~INNGVYk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~--G~~LTeaDirLy~TiIRFD~ 248 (319)
T KOG2903|consen 171 RAQIDETNSWVYDKINNGVYKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLC--GDTLTEADIRLYTTIIRFDE 248 (319)
T ss_pred HHHHhhhhceecccccCceeeeccccccchHHHHHHHHHHHHHHHHHHHhcccceEee--ccccchhheeeeeeEEeehh
Confidence 88888888886432211 1466778999999999877 899 67999999999998865321
Q ss_pred h----cc---ccCCCCChhHHHHHHHHHh-hHhhHhh
Q 015335 116 G----LA---NLDQGKMPHVMRWMDYIQS-KEALGDL 144 (408)
Q Consensus 116 ~----~~---~~~~~~yP~I~RW~d~Vq~-~p~~~~~ 144 (408)
. +. ..-|..||||.-|...|-. .|+|+..
T Consensus 249 VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~~~~T 285 (319)
T KOG2903|consen 249 VYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPGFSST 285 (319)
T ss_pred hhheeeecchhhhhccCcHHHHHHHHHHhhccchhhc
Confidence 1 11 1235799999999999865 8888776
No 83
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=95.72 E-value=0.014 Score=55.07 Aligned_cols=70 Identities=19% Similarity=0.275 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhhcCC---CCeEeecCCCccHHHHHHHHHHHHHH---hhcccc-CCCCChhHHHHHHHHHhhHhhHhhh
Q 015335 74 ACFDVLIKLNEELAT---KSVLLGNGLRTSEADVIVFSAVHSFV---VGLANL-DQGKMPHVMRWMDYIQSKEALGDLF 145 (408)
Q Consensus 74 ~~~~~L~~Ln~~L~~---rtyLvGnG~~~TlADI~l~~~l~~~~---~~~~~~-~~~~yP~I~RW~d~Vq~~p~~~~~~ 145 (408)
.+-..|..||.||++ +.||. |+++|+||+.+..-||..- ..+.+. -...+++|.||+..+-++..|....
T Consensus 127 ~Ll~~L~~Ld~yL~sp~~~~Fl~--Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tc 203 (221)
T KOG1422|consen 127 ALLKELEKLDDYLKSPSRRKFLD--GDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTC 203 (221)
T ss_pred HHHHHHHHHHHHhcCccCCcccc--CCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCC
Confidence 445567999999996 78999 7899999999999998641 122222 2468999999999999998887664
No 84
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=94.42 E-value=0.17 Score=49.87 Aligned_cols=52 Identities=21% Similarity=0.284 Sum_probs=39.3
Q ss_pred hhc-CCCCeEeecCCCccHHHHHHHHHHHHHHhhcc-ccCCCCChhHHHHHHHHHhh
Q 015335 84 EEL-ATKSVLLGNGLRTSEADVIVFSAVHSFVVGLA-NLDQGKMPHVMRWMDYIQSK 138 (408)
Q Consensus 84 ~~L-~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~-~~~~~~yP~I~RW~d~Vq~~ 138 (408)
+.| .+|.||- |.+|++||+++|..|.+. ..+. ..+.-+.-+|-.||-+|.+.
T Consensus 302 aalgknr~flG--G~kPnLaDLsvfGvl~sm-~gc~afkd~~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 302 AALGKNRPFLG--GKKPNLADLSVFGVLRSM-EGCQAFKDCLQNTSIGEWYYRMEAL 355 (370)
T ss_pred HHhCCCCCccC--CCCCchhhhhhhhhhhHh-hhhhHHHHHHhcchHHHHHHHHHHH
Confidence 345 6788888 789999999999999864 2221 13455678999999999876
No 85
>PHA02142 putative RNA ligase
Probab=94.31 E-value=0.097 Score=53.61 Aligned_cols=73 Identities=27% Similarity=0.249 Sum_probs=43.6
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEc-------cC--CeeEEEEeCCCCCCCch-----hcCCCEEEE----Eeecccccc
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDV-------GE--AKLRQVVSGLAKYCNPD-----DLTNRRVAL----ITNVKPGKL 314 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~-------G~--~~~r~IvsGl~~~~~~~-----~l~g~~V~v----~~nlkp~k~ 314 (408)
..|-+|..+++||+||.+=+.+||- |+ .+-+-|-+-.-.++|.. .+.++...+ -.-|+-.+|
T Consensus 10 v~v~~i~~i~pi~~Ad~ie~a~V~gw~vVV~kg~f~~GD~~vY~eiDS~lP~~~~~~~~l~~~~~~~~g~~~~Ri~t~kl 89 (366)
T PHA02142 10 ASMRKIADLQPIPGADAIEVATIDGWEVVVKKGEFRVGDDCVYFEIDSLLPTDNPAFRFLETRARIYDGKMRARIKTIKL 89 (366)
T ss_pred EEEEEEeeecccCCCCceeEEEECCEEEEEeccccccCCeEEEecccccccCCchhhhhhhccccccCCcccceEEEEEE
Confidence 5788999999999999998888862 11 01122323232333211 121111111 115788899
Q ss_pred ccccccceeee
Q 015335 315 RDVMSEGLVLC 325 (408)
Q Consensus 315 rGv~S~gMvLc 325 (408)
||..||||+|=
T Consensus 90 RG~iSQGl~lp 100 (366)
T PHA02142 90 RGQISQGIALP 100 (366)
T ss_pred eeEEeeeEEec
Confidence 99999999654
No 86
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=93.17 E-value=0.049 Score=52.13 Aligned_cols=59 Identities=31% Similarity=0.409 Sum_probs=49.0
Q ss_pred HHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChhHHHHHHHHHhhHhhH
Q 015335 76 FDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPHVMRWMDYIQSKEALG 142 (408)
Q Consensus 76 ~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~I~RW~d~Vq~~p~~~ 142 (408)
.+.++.||.+|.+++|+- |.+++-+|+.+|.++.. ......|+|..|||.+|.++....
T Consensus 10 ~~glk~l~~sLA~ks~~~--g~~~s~edv~vf~al~~------ep~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIE--GYQLSKEDVVVFAALGV------EPQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCC--CCCcccccceeehhccc------CcchhhhhHHHHHHHHHHHHHHHH
Confidence 467899999999999999 78999999999988742 223578999999999998876543
No 87
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=92.84 E-value=0.2 Score=49.07 Aligned_cols=63 Identities=21% Similarity=0.375 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccc----cCCCCChhHHHHHHHHHhh
Q 015335 74 ACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLAN----LDQGKMPHVMRWMDYIQSK 138 (408)
Q Consensus 74 ~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~----~~~~~yP~I~RW~d~Vq~~ 138 (408)
-+.+-|+.+.+.|.++.||. |+++|-+|..+|+.|.....-+.. .--.+||+|..|-+||.+.
T Consensus 207 ll~rDlr~i~~~Lg~Kkflf--Gdkit~~DatvFgqLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 207 LLHRDLRAISDYLGDKKFLF--GDKITPADATVFGQLAQVYYPFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred HHHHHHHHHHHHhCCCcccc--CCCCCcceeeehhhhhheeccCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 34567899999999999999 789999999999999764221111 1126899999999999874
No 88
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.82 E-value=0.26 Score=46.64 Aligned_cols=64 Identities=17% Similarity=0.300 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHh-hcccc----CCCCChhHHHHHHHHHhh
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVV-GLANL----DQGKMPHVMRWMDYIQSK 138 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~-~~~~~----~~~~yP~I~RW~d~Vq~~ 138 (408)
.+.+...+.|..+|..++|+. |++||-+|..+|..++..+. .++.. -..+|+|+..+-.||.+.
T Consensus 180 e~vdkc~~aLsa~L~~q~yf~--g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 180 EQVDKCCRALSAQLGSQPYFT--GDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHHHHhcCCCccC--CCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 355668899999999999999 78999999999999988643 33322 236899988888887654
No 89
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=91.51 E-value=0.61 Score=41.21 Aligned_cols=62 Identities=23% Similarity=0.318 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCCh-hHHHHHHHHHhhHhh
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMP-HVMRWMDYIQSKEAL 141 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP-~I~RW~d~Vq~~p~~ 141 (408)
.+++..|..|+..|....... | ++|+-||.+|..|+.+.. . .. -.|| +|.+|+++|...-.+
T Consensus 62 ~~l~~~L~~Le~ll~~~~~~n--~-~LS~dDi~lFp~LR~Lti-v--kg-i~~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 62 AELNADLEELEPLLASPNAVN--G-ELSIDDIILFPILRSLTI-V--KG-IQWPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHH-SCTTBTT--S-S--HHHHHHHHHHHHHCT-C--TT-S---HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHhccccccC--C-CCCHHHHHHHHHHhhhhh-c--cC-CcCCHHHHHHHHHHHHHcCC
Confidence 466778888888887665555 4 899999999999987521 1 12 2464 799999999988654
No 90
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.00 E-value=1.5 Score=43.89 Aligned_cols=62 Identities=19% Similarity=0.224 Sum_probs=48.4
Q ss_pred HHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhcccc-----CCCCChhHHHHHHHHHhh
Q 015335 75 CFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANL-----DQGKMPHVMRWMDYIQSK 138 (408)
Q Consensus 75 ~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~-----~~~~yP~I~RW~d~Vq~~ 138 (408)
....+..|.+.|.+++|+. |+++|--|..+|+.+...+..-.+. ....++|++|+..+|...
T Consensus 168 Aska~~~LS~~Lgs~kffF--gd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 168 ASKALNLLSTLLGSKKFFF--GDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHHHHHHHHhcCceEee--CCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHH
Confidence 3457889999999999999 6699999999999998743321221 124599999999998875
No 91
>PTZ00385 lysyl-tRNA synthetase; Provisional
Probab=87.44 E-value=0.081 Score=58.08 Aligned_cols=50 Identities=16% Similarity=0.129 Sum_probs=46.4
Q ss_pred EEeCCC-CCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEeeccccc
Q 015335 261 SWKHPS-ADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITNVKPGK 313 (408)
Q Consensus 261 ~~~hp~-adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~nlkp~k 313 (408)
|+..|. +.+|.-.++|.|.+..|+|+||+..||. ++.|+.++++|| +||.
T Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~-~pr~ 659 (659)
T PTZ00385 609 CANVRELRRVIMELGQRGGENGLPTAGGRLSEWRI--TLTFAIIRFICG-TPRR 659 (659)
T ss_pred hhhchHHHHHHhceecccCCCCccchhHHHHHHHH--HHhcceeEEEeC-CCCC
Confidence 888898 8999999999999999999999999987 799999999999 8873
No 92
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=87.06 E-value=2.1 Score=37.00 Aligned_cols=65 Identities=15% Similarity=0.166 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhhcCC-CCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCCh-hHHHHHHHHHhhHhhHhhh
Q 015335 73 KACFDVLIKLNEELAT-KSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMP-HVMRWMDYIQSKEALGDLF 145 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~-rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP-~I~RW~d~Vq~~p~~~~~~ 145 (408)
..+++++...+..|.. +.||.| .+||||..+..++.++.. .....| .+.+|.+++-++|.++.-+
T Consensus 46 ~~a~kL~~~a~~ll~~g~~~LFG---ewsIAD~dlA~ml~Rl~~-----~gd~vP~~l~~Ya~~qwqrpsVQ~Wl 112 (117)
T PF14834_consen 46 AAAQKLIAVAERLLADGGPNLFG---EWSIADADLALMLNRLVT-----YGDPVPERLADYAERQWQRPSVQRWL 112 (117)
T ss_dssp HHHHHHHHHHHHHTTT--SSTTS---S--HHHHHHHHHHHHHHT-----TT----HHHHHHHHHHHT-HHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCccc---cchHHHHHHHHHHHHHHH-----cCCCCCHHHHHHHHHHHCCHHHHHHH
Confidence 4556677777777765 789995 599999999999988642 223444 5889999999999988764
No 93
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=86.03 E-value=2.3 Score=37.43 Aligned_cols=61 Identities=15% Similarity=0.265 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCCh-hHHHHHHHHHhhHh
Q 015335 73 KACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMP-HVMRWMDYIQSKEA 140 (408)
Q Consensus 73 ~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP-~I~RW~d~Vq~~p~ 140 (408)
..++..|..|+..|.....+. ..+|+-||.+|..|+.+.. . ... .|| +|.+|+++|.+...
T Consensus 63 ~~l~~~L~~l~~ll~~~~~~n---~~ls~DDi~lFp~LR~Lt~-v--kgi-~~P~~V~~Y~~~~s~~t~ 124 (128)
T cd03199 63 AALNALLEELDPLILSSEAVN---GQLSTDDIILFPILRNLTL-V--KGL-VFPPKVKAYLERMSALTK 124 (128)
T ss_pred HHHHHHHHHHHHHHcCccccC---CcCCHHHHHHHHHHhhhhh-h--cCC-CCCHHHHHHHHHHHHHhC
Confidence 456677888887775544443 3799999999999987532 1 122 464 79999999998754
No 94
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=62.70 E-value=26 Score=32.80 Aligned_cols=95 Identities=18% Similarity=0.295 Sum_probs=65.1
Q ss_pred HHHHHHhcCCCcc-----cHHHHHHHHHHHhcCC----CC----------------------------------------
Q 015335 41 TLYSDILKSSGKS-----SNDEVMKWIEFAESFP----AD---------------------------------------- 71 (408)
Q Consensus 41 ~I~~~L~~~~G~~-----erAeV~qWL~fa~s~~----~~---------------------------------------- 71 (408)
-|..|+-+..|++ -+-+|..|+.-.++.+ .|
T Consensus 64 DIV~y~d~~~~~~~lt~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~ 143 (215)
T COG2999 64 DIVHYVDELDGKPLLTGKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQY 143 (215)
T ss_pred HHHHHHHHhcCchhhccCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHH
Confidence 6888888887763 3678899997655422 11
Q ss_pred hHHHHHHHHHHHhhcCCCCeEeecCCCccHHHHHHHHHHHHHHhhccccCCCCChh-HHHHHHHHHhhHhhH
Q 015335 72 SKACFDVLIKLNEELATKSVLLGNGLRTSEADVIVFSAVHSFVVGLANLDQGKMPH-VMRWMDYIQSKEALG 142 (408)
Q Consensus 72 ~~~~~~~L~~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~~~~~~~~~~~~~~yP~-I~RW~d~Vq~~p~~~ 142 (408)
...+...|+.|+.-+...+-+-| .+|.-||.+|..|..++. ..--.+|. +..|.++|.....+.
T Consensus 144 ~~~i~~dl~~l~~Li~~~s~~n~---~l~~ddi~vFplLRnlt~----v~gi~wps~v~dy~~~msektqV~ 208 (215)
T COG2999 144 LKRIQADLRALDKLIVGPSAVNG---ELSEDDILVFPLLRNLTL----VAGIQWPSRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHHHHHhcCcchhcc---ccchhhhhhhHHhcccee----cccCCCcHHHHHHHHHHHHhhCcc
Confidence 03556677788877777764542 699999999998876422 22235664 999999998875543
No 95
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=53.05 E-value=21 Score=32.72 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhcCCC---CeEeecCCCccHHHHHHHHHHHHH
Q 015335 75 CFDVLIKLNEELATK---SVLLGNGLRTSEADVIVFSAVHSF 113 (408)
Q Consensus 75 ~~~~L~~Ln~~L~~r---tyLvGnG~~~TlADI~l~~~l~~~ 113 (408)
..+.+..|++.|... .|+.|+ ..+|-.|+.+|+.|+..
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~-~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGD-SKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCC-CCCCHHHHHHHHHHHHH
Confidence 456889999999998 999963 45999999999999864
No 96
>PRK10413 hydrogenase 2 accessory protein HypG; Provisional
Probab=43.96 E-value=72 Score=25.90 Aligned_cols=49 Identities=20% Similarity=0.158 Sum_probs=34.8
Q ss_pred EEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEee
Q 015335 255 VGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALITN 308 (408)
Q Consensus 255 VG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~n 308 (408)
=|+|+++... .+..-+||+|+ ..|.|.-.+..-..++...|.+|+|-.-
T Consensus 6 P~kVi~i~~~----~~~~A~vd~~G-v~r~V~l~Lv~~~~~~~~vGDyVLVHaG 54 (82)
T PRK10413 6 PGQVLAVGED----IHQLAQVEVCG-IKRDVNIALICEGNPADLLGQWVLVHVG 54 (82)
T ss_pred ceEEEEECCC----CCcEEEEEcCC-eEEEEEeeeeccCCcccccCCEEEEecc
Confidence 3788888543 25568899986 6788887775433356688999998763
No 97
>COG0093 RplN Ribosomal protein L14 [Translation, ribosomal structure and biogenesis]
Probab=37.41 E-value=2.8e+02 Score=24.25 Aligned_cols=83 Identities=18% Similarity=0.277 Sum_probs=46.5
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEe-eccccccc--cccccceeeeccC-
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALIT-NVKPGKLR--DVMSEGLVLCASN- 328 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~-nlkp~k~r--Gv~S~gMvLca~~- 328 (408)
|.++.++.|-..-+|..+++..|- |.. .|. ..+ +|..|++.. .-.|..++ |-.=.+.|.-...
T Consensus 2 iq~~t~l~vADNSGAk~v~~I~V~-gg~-~r~-~A~----------vGD~ivvsVKka~P~~~vKkg~V~~AViVRtkk~ 68 (122)
T COG0093 2 IQVQTRLNVADNSGAKEVMCIKVL-GGS-RRR-YAG----------VGDIIVVSVKKAIPRGMVKKGDVVKAVVVRTKKE 68 (122)
T ss_pred cccccEEEEccCCCCcEEEEEEEe-ccc-ccc-ccC----------CCCEEEEEEeeccCCcceeccceEEEEEEEeCCc
Confidence 467788999999999989888886 432 222 333 466554443 34442222 2233333332222
Q ss_pred -----------CCCCceEEecCCCCCCCCceEE
Q 015335 329 -----------EDHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 329 -----------~~~~~v~ll~pp~~~~~G~~v~ 350 (408)
+|+ .+.|+ -|++.|.|+||+
T Consensus 69 ~rR~DGs~i~FddN-A~Vii-n~~g~P~GtrI~ 99 (122)
T COG0093 69 VRRPDGSYIKFDDN-AAVII-NPDGEPRGTRIF 99 (122)
T ss_pred eEcCCCCEEEeCCc-eEEEE-CCCCCcccceEe
Confidence 133 33344 456889999997
No 98
>TIGR03673 rpl14p_arch 50S ribosomal protein L14P. Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L24e, part of which may contact the 16S rRNA in 2 intersubunit bridges.
Probab=36.19 E-value=1.6e+02 Score=26.01 Aligned_cols=86 Identities=20% Similarity=0.282 Sum_probs=53.6
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEE-ccCCeeEEEEeCCCCCCCchhcCCCEEEEEe-eccccccccccccceeeeccCC-
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEID-VGEAKLRQVVSGLAKYCNPDDLTNRRVALIT-NVKPGKLRDVMSEGLVLCASNE- 329 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd-~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~-nlkp~k~rGv~S~gMvLca~~~- 329 (408)
|..+.++.|...-++..+.|-.|- .|....| + +-..+|..+++.. ...| ..+|-.-.|.|+....+
T Consensus 11 Iq~~t~L~VaDNSGak~v~cI~vl~~~g~~~r-~---------~~a~iGD~IvvsVK~~~p-~~kg~v~kAVIVRtkk~~ 79 (131)
T TIGR03673 11 LPVGSLLVCADNTGAKEVEVISVKGYKGVKRR-L---------PCAGVGDMVVVSVKKGTP-EMRKQVFKAVVVRQRKEY 79 (131)
T ss_pred eccCCEEEEeeCCCCceEEEEEEeeeCCCccc-C---------CccccCCEEEEEEEECCc-cccCCEeEEEEEEeCcce
Confidence 688888899888888777766653 1221111 1 1123677766665 5666 45777778887766532
Q ss_pred ----------CCCceEEecCCCCCCCCceEE
Q 015335 330 ----------DHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 330 ----------~~~~v~ll~pp~~~~~G~~v~ 350 (408)
|.+.+.|| =+.+.|.|+||+
T Consensus 80 ~R~dGs~i~FddNa~VLi-n~~~~P~GTRI~ 109 (131)
T TIGR03673 80 RRPDGTRVKFEDNAVVIV-TPDGEPKGTEIK 109 (131)
T ss_pred ecCCCcEEEeCCcEEEEE-CCCCCEeeeEEE
Confidence 22344344 356789999997
No 99
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=33.77 E-value=28 Score=26.87 Aligned_cols=14 Identities=0% Similarity=-0.012 Sum_probs=8.3
Q ss_pred cHHHHHHHHhcCCC
Q 015335 38 DIKTLYSDILKSSG 51 (408)
Q Consensus 38 ~l~~I~~~L~~~~G 51 (408)
++.+|++||.+.+|
T Consensus 67 eS~aI~~yL~~~~~ 80 (81)
T cd03048 67 ESGAILLYLAEKYD 80 (81)
T ss_pred cHHHHHHHHHHHhC
Confidence 34467777666554
No 100
>PRK08571 rpl14p 50S ribosomal protein L14P; Reviewed
Probab=30.23 E-value=2.4e+02 Score=24.96 Aligned_cols=86 Identities=17% Similarity=0.260 Sum_probs=52.9
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEE-ccCCeeEEEEeCCCCCCCchhcCCCEEEEEe-eccccccccccccceeeeccCC-
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEID-VGEAKLRQVVSGLAKYCNPDDLTNRRVALIT-NVKPGKLRDVMSEGLVLCASNE- 329 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd-~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~-nlkp~k~rGv~S~gMvLca~~~- 329 (408)
|..+.++.|...-++..+.|..|= .|.. .+.+ +-..+|..|+|.. ...| ..+|-.-.|.|+-...+
T Consensus 12 Iq~~T~L~VaDNSGAk~v~cI~vlg~~g~-~~r~---------~~a~iGD~IvvsVK~~~p-~~kg~v~kAVIVRtkk~~ 80 (132)
T PRK08571 12 LPVGARLVCADNTGAKEVEIISVKGYKGV-KRRL---------PKAGVGDMVVVSVKKGTP-EMRKQVLRAVVVRQRKEY 80 (132)
T ss_pred ecCCCEEEEeeCCCCCeEEEEEEeccCCC-CccC---------CccccCCEEEEEEEECCC-cccCCEeEEEEEEeccce
Confidence 678888888888888777666653 1111 1111 1124677776666 5666 45777777777655432
Q ss_pred ----------CCCceEEecCCCCCCCCceEE
Q 015335 330 ----------DHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 330 ----------~~~~v~ll~pp~~~~~G~~v~ 350 (408)
+.+.+.|+. +.+.|.|+||+
T Consensus 81 ~R~dGs~i~F~dNa~VLin-~~~~p~GTRI~ 110 (132)
T PRK08571 81 RRPDGTRVKFEDNAAVIVT-PEGTPKGTEIK 110 (132)
T ss_pred EcCCCcEEEeCCcEEEEEC-CCCCEeeeEEe
Confidence 223454554 56789999996
No 101
>COG0298 HypC Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=26.35 E-value=1.9e+02 Score=23.48 Aligned_cols=43 Identities=21% Similarity=0.168 Sum_probs=30.3
Q ss_pred EEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEe
Q 015335 256 GLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALIT 307 (408)
Q Consensus 256 G~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~ 307 (408)
|+|+++...-+ .-+||+|+ -.|+|-=-| ++.+..+|++|+|=.
T Consensus 7 gqI~~I~~~~~-----~A~Vd~gG-vkreV~l~L---v~~~v~~GdyVLVHv 49 (82)
T COG0298 7 GQIVEIDDNNH-----LAIVDVGG-VKREVNLDL---VGEEVKVGDYVLVHV 49 (82)
T ss_pred cEEEEEeCCCc-----eEEEEecc-EeEEEEeee---ecCccccCCEEEEEe
Confidence 78888864322 67899997 567665555 234789999999865
No 102
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=24.55 E-value=42 Score=25.74 Aligned_cols=18 Identities=11% Similarity=0.039 Sum_probs=7.9
Q ss_pred hhHHHHHHHHHHhCCCCC
Q 015335 11 RKQLIVSILCKHLSLDHK 28 (408)
Q Consensus 11 ~r~~~~~~l~kyl~Lnp~ 28 (408)
+.+..+..+.+.++++-+
T Consensus 10 ~~s~rv~~~L~e~gl~~e 27 (73)
T cd03052 10 FSSQKVRLVIAEKGLRCE 27 (73)
T ss_pred ccHHHHHHHHHHcCCCCE
Confidence 333344444555555433
No 103
>TIGR00074 hypC_hupF hydrogenase assembly chaperone HypC/HupF. An additional proposed function is to shuttle the iron atom that has been liganded at the HypC/HypD complex to the precursor of the large hydrogenase (HycE) subunit. PubMed:12441107.
Probab=23.79 E-value=1.9e+02 Score=23.09 Aligned_cols=40 Identities=13% Similarity=0.068 Sum_probs=30.2
Q ss_pred EEEEEEEeCCCCCceEEEEEEccCCeeEEEEeCCCCCCCchhcCCCEEEEEe
Q 015335 256 GLIRKSWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCNPDDLTNRRVALIT 307 (408)
Q Consensus 256 G~I~~~~~hp~adkL~v~~Vd~G~~~~r~IvsGl~~~~~~~~l~g~~V~v~~ 307 (408)
|+|++++. + .-.||+|+ ..|.|.-.+. ++...|.+|+|-.
T Consensus 7 ~~V~~i~~--~-----~A~v~~~G-~~~~v~l~lv----~~~~vGD~VLVH~ 46 (76)
T TIGR00074 7 GQVVEIDE--N-----IALVEFCG-IKRDVSLDLV----GEVKVGDYVLVHV 46 (76)
T ss_pred eEEEEEcC--C-----EEEEEcCC-eEEEEEEEee----CCCCCCCEEEEec
Confidence 78888754 1 47889885 6788887773 5678999999876
No 104
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=22.74 E-value=1.6e+02 Score=25.74 Aligned_cols=69 Identities=13% Similarity=0.046 Sum_probs=31.0
Q ss_pred ccHHHHHHHHhcCCCcccHHHHHHHHHHHhcCCCC----hHHHHHHHH-HHHhhcCCCCeEeecCCCccHHHHHHHHHHH
Q 015335 37 KDIKTLYSDILKSSGKSSNDEVMKWIEFAESFPAD----SKACFDVLI-KLNEELATKSVLLGNGLRTSEADVIVFSAVH 111 (408)
Q Consensus 37 ~~l~~I~~~L~~~~G~~erAeV~qWL~fa~s~~~~----~~~~~~~L~-~Ln~~L~~rtyLvGnG~~~TlADI~l~~~l~ 111 (408)
.+..+|++||++.+-..+--++..-+.-..+.+.. ...+..+.. .|+.+| +. . .+.+|.++|.+|+.+|
T Consensus 49 ~e~NAIvrYl~nDF~~~es~e~e~a~~~lE~~ly~k~~~~e~v~~~~~k~l~~yl---~~-~--~e~lsAt~lIlFAn~Y 122 (122)
T PF09635_consen 49 FEPNAIVRYLANDFEGQESIEYEFALSSLENVLYHKSNKKEHVESAVNKSLDNYL---TS-L--KEPLSATQLILFANVY 122 (122)
T ss_dssp --HHHHHHHHTT--TTTTSHHHHHHHHHTTTGGGSSS--HHHHHHHHHHHHHHT----S------SS--HHHHHHHHHHH
T ss_pred ecccHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcccccHHHHHHHHHHhHHHhh---hh-h--cCCCCHHHheeeeecC
Confidence 33449999999987544333332222222222211 122222222 455444 12 3 4678999999998864
No 105
>PRK04313 30S ribosomal protein S4e; Validated
Probab=22.20 E-value=1.9e+02 Score=28.19 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=22.7
Q ss_pred EEEEEEEEEeCC-CCCceEEEEEEccCCeeEEEEeCC
Q 015335 254 QVGLIRKSWKHP-SADSLLVEEIDVGEAKLRQVVSGL 289 (408)
Q Consensus 254 rVG~I~~~~~hp-~adkL~v~~Vd~G~~~~r~IvsGl 289 (408)
|||+|.+++.|+ .+.++...+ |..+.+..|+.+.+
T Consensus 188 riG~I~~i~~~~~~~~~~V~i~-d~~G~~F~T~~~~v 223 (237)
T PRK04313 188 EIGKIKEIEVTKSSKPNIVTLE-DKDGEKFETILDYV 223 (237)
T ss_pred eEEEEEEEEEccCCCCcEEEEE-cCCCCEEEEEeeeE
Confidence 789999999999 454665555 44333455655543
No 106
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=20.82 E-value=70 Score=23.91 Aligned_cols=14 Identities=0% Similarity=-0.012 Sum_probs=8.3
Q ss_pred ccHHHHHHHHhcCC
Q 015335 37 KDIKTLYSDILKSS 50 (408)
Q Consensus 37 ~~l~~I~~~L~~~~ 50 (408)
.+..+|++||.+.+
T Consensus 62 ~es~aI~~yL~~~~ 75 (76)
T cd03046 62 TESAAIILYLAEKY 75 (76)
T ss_pred EcHHHHHHHHHHhC
Confidence 44556777776544
No 107
>PTZ00054 60S ribosomal protein L23; Provisional
Probab=20.55 E-value=4.5e+02 Score=23.54 Aligned_cols=86 Identities=19% Similarity=0.326 Sum_probs=53.7
Q ss_pred eEEEEEEEEEeCCCCCceEEEEEEccC-CeeEEEEeCCCCCCCchhcCCCEEEEEe-eccccccccccccceeeeccCC-
Q 015335 253 IQVGLIRKSWKHPSADSLLVEEIDVGE-AKLRQVVSGLAKYCNPDDLTNRRVALIT-NVKPGKLRDVMSEGLVLCASNE- 329 (408)
Q Consensus 253 irVG~I~~~~~hp~adkL~v~~Vd~G~-~~~r~IvsGl~~~~~~~~l~g~~V~v~~-nlkp~k~rGv~S~gMvLca~~~- 329 (408)
|.++.++.|...-++..+.|..|- |- +..+.+ +-.-+|..++|.. ...| ..+|-.-.|.|+-...+
T Consensus 19 Iq~~t~L~vaDNSGAk~v~cI~vl-g~~g~~~r~---------~~a~iGD~IvvsVKk~~p-~~kg~V~kAVIVRtKk~~ 87 (139)
T PTZ00054 19 LPVGAVVNCADNSGAKNLYIIAVK-GIHGRLNRL---------PSASLGDMVLATVKKGKP-ELRKKVLNAVIIRQRKAW 87 (139)
T ss_pred ecCCCEEEEeeCCCccEEEEEEEe-ccCcCCccC---------cccccCCEEEEEEEECCC-cccCCEeeEEEEEECcce
Confidence 688999999988888777776664 21 011111 1233577666665 6666 56777777877655432
Q ss_pred ----------CCCceEEecCCCCCCCCceEE
Q 015335 330 ----------DHTNVEPLLPPEGAKIGERIS 350 (408)
Q Consensus 330 ----------~~~~v~ll~pp~~~~~G~~v~ 350 (408)
+.+.+.|+. +++.|.|+||+
T Consensus 88 rR~dGs~i~F~dNA~VLin-~~~~p~GTRI~ 117 (139)
T PTZ00054 88 RRKDGVFIYFEDNAGVIVN-PKGEMKGSAIT 117 (139)
T ss_pred EcCCCcEEEeCCcEEEEEC-CCCCEeeeEEe
Confidence 223454453 56789999997
No 108
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=20.43 E-value=39 Score=25.63 Aligned_cols=11 Identities=0% Similarity=0.120 Sum_probs=6.0
Q ss_pred cHHHHHHHHhc
Q 015335 38 DIKTLYSDILK 48 (408)
Q Consensus 38 ~l~~I~~~L~~ 48 (408)
+..+|++||.+
T Consensus 64 eS~aI~~Yl~~ 74 (76)
T cd03050 64 ESVAILRYLAR 74 (76)
T ss_pred cHHHHHHHHHh
Confidence 34466666654
Done!