Query 015341
Match_columns 408
No_of_seqs 119 out of 1577
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 10:55:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015341.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015341hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n5f_A L-carbamoylase, N-carba 100.0 1.1E-52 3.9E-57 414.4 42.3 376 1-407 30-405 (408)
2 1z2l_A Allantoate amidohydrola 100.0 2.2E-50 7.4E-55 400.1 37.7 375 1-407 34-409 (423)
3 2v8h_A Beta-alanine synthase; 100.0 5.4E-50 1.9E-54 402.2 37.8 370 2-407 66-445 (474)
4 1ysj_A Protein YXEP; M20 famil 100.0 1.1E-45 3.7E-50 363.9 34.1 333 1-408 47-400 (404)
5 3io1_A Aminobenzoyl-glutamate 100.0 2.1E-44 7.1E-49 358.8 34.0 331 1-408 29-432 (445)
6 1xmb_A IAA-amino acid hydrolas 100.0 1.9E-44 6.4E-49 356.6 32.4 334 1-407 43-401 (418)
7 3gb0_A Peptidase T; NP_980509. 100.0 2.4E-44 8.3E-49 350.8 30.4 321 1-407 21-371 (373)
8 3rza_A Tripeptidase; phosphory 100.0 6.5E-44 2.2E-48 350.5 30.1 320 1-407 39-391 (396)
9 3ram_A HMRA protein; two-domai 100.0 4E-44 1.4E-48 351.3 27.0 325 1-408 31-373 (394)
10 3pfo_A Putative acetylornithin 100.0 6.4E-44 2.2E-48 354.6 27.2 334 1-407 41-427 (433)
11 1vgy_A Succinyl-diaminopimelat 100.0 8.6E-43 2.9E-47 342.2 32.7 330 1-408 21-378 (393)
12 3isz_A Succinyl-diaminopimelat 100.0 1.7E-42 5.9E-47 338.1 34.5 331 1-408 18-375 (377)
13 1cg2_A Carboxypeptidase G2; me 100.0 4.1E-42 1.4E-46 337.3 30.1 319 5-407 41-389 (393)
14 3ife_A Peptidase T; metallopep 100.0 6.2E-43 2.1E-47 347.4 24.5 318 2-407 53-430 (434)
15 3tx8_A Succinyl-diaminopimelat 100.0 4.1E-42 1.4E-46 334.6 24.2 322 1-406 28-369 (369)
16 3dlj_A Beta-Ala-His dipeptidas 100.0 3.5E-40 1.2E-44 332.0 33.2 346 4-407 51-481 (485)
17 2rb7_A Peptidase, M20/M25/M40 100.0 5.3E-41 1.8E-45 326.0 23.1 305 3-407 26-358 (364)
18 2zog_A Cytosolic non-specific 100.0 4.7E-40 1.6E-44 330.9 28.5 346 4-407 44-474 (479)
19 3ct9_A Acetylornithine deacety 100.0 6.2E-40 2.1E-44 317.5 25.0 307 1-408 26-355 (356)
20 2pok_A Peptidase, M20/M25/M40 100.0 2E-39 6.9E-44 326.3 27.2 338 5-407 66-480 (481)
21 3pfe_A Succinyl-diaminopimelat 100.0 3.7E-39 1.3E-43 323.4 28.8 339 4-407 46-468 (472)
22 2f7v_A Aectylcitrulline deacet 100.0 1.7E-39 5.7E-44 316.1 23.9 307 4-406 32-367 (369)
23 1fno_A Peptidase T; metallo pe 100.0 8.9E-39 3.1E-43 316.0 28.2 316 3-407 29-404 (417)
24 2qyv_A XAA-His dipeptidase; YP 100.0 1.5E-37 5.1E-42 313.1 31.5 322 1-408 26-485 (487)
25 3khx_A Putative dipeptidase sa 100.0 5.5E-37 1.9E-41 308.8 28.0 356 3-407 63-488 (492)
26 3mru_A Aminoacyl-histidine dip 100.0 1.2E-36 4.1E-41 306.0 26.3 320 1-407 29-486 (490)
27 1lfw_A PEPV; hydrolase, dipept 100.0 3.6E-34 1.2E-38 287.3 24.8 343 4-407 44-464 (470)
28 3t68_A Succinyl-diaminopimelat 99.9 9E-23 3.1E-27 189.2 17.5 104 1-113 21-149 (268)
29 4h2k_A Succinyl-diaminopimelat 99.9 2.3E-21 8E-26 179.8 19.4 104 1-113 21-149 (269)
30 2wzn_A TET3, 354AA long hypoth 99.8 6.6E-22 2.3E-26 188.4 -13.1 308 1-407 24-347 (354)
31 1vhe_A Aminopeptidase/glucanas 99.7 1.3E-16 4.3E-21 154.8 21.9 102 1-112 22-226 (373)
32 2fvg_A Endoglucanase; TM1049, 99.7 9.9E-18 3.4E-22 160.6 12.5 101 1-113 13-208 (340)
33 1q7l_A Aminoacylase-1; catalys 99.7 2.5E-17 8.6E-22 145.4 13.6 105 4-114 30-160 (198)
34 2wyr_A Cobalt-activated peptid 99.7 2.2E-16 7.6E-21 150.7 15.2 100 1-113 17-216 (332)
35 1y0y_A FRV operon protein FRVX 99.7 1.7E-15 6E-20 145.7 18.2 79 320-407 267-348 (353)
36 2gre_A Deblocking aminopeptida 99.6 2.8E-15 9.5E-20 144.0 16.6 96 2-100 22-223 (349)
37 1tkj_A Aminopeptidase, SGAP; d 99.6 4.7E-16 1.6E-20 145.1 10.8 104 3-114 32-143 (284)
38 1vho_A Endoglucanase; structur 99.6 1.4E-14 4.7E-19 139.1 19.1 94 1-100 20-207 (346)
39 1ylo_A Hypothetical protein SF 99.6 1.9E-14 6.4E-19 138.2 17.1 101 1-112 18-211 (348)
40 1rtq_A Bacterial leucyl aminop 99.6 4.7E-15 1.6E-19 139.4 10.0 105 2-113 39-162 (299)
41 3tc8_A Leucine aminopeptidase; 99.5 4.8E-14 1.7E-18 132.5 13.2 107 2-114 44-184 (309)
42 3kl9_A PEPA, glutamyl aminopep 99.5 2E-13 6.8E-18 130.6 17.2 103 1-112 18-224 (355)
43 3gux_A Putative Zn-dependent e 99.5 4.2E-14 1.4E-18 133.0 12.2 107 2-114 46-187 (314)
44 2afw_A Glutaminyl-peptide cycl 99.4 2.4E-13 8.3E-18 129.3 10.9 109 2-114 49-189 (329)
45 3cpx_A Aminopeptidase, M42 fam 99.4 1.7E-13 5.8E-18 129.9 7.9 93 1-112 32-201 (321)
46 3pb6_X Glutaminyl-peptide cycl 99.3 4.6E-12 1.6E-16 119.7 10.7 109 2-114 57-193 (330)
47 4fuu_A Leucine aminopeptidase; 99.2 8.7E-11 3E-15 110.6 13.2 93 2-100 44-162 (309)
48 4f9u_A CG32412; alpha/beta hyd 99.2 4.7E-11 1.6E-15 112.6 11.4 109 2-114 28-162 (312)
49 4fai_A CG5976, isoform B; alph 99.1 2.2E-10 7.6E-15 108.7 10.8 109 2-114 55-186 (330)
50 2ek8_A Aminopeptidase; metallo 99.1 2E-10 6.9E-15 112.9 10.2 99 8-115 173-285 (421)
51 2vpu_A TET3, 354AA long hypoth 98.9 1.2E-09 4E-14 104.3 7.2 52 1-55 24-76 (354)
52 3iib_A Peptidase M28; YP_92679 98.9 1.6E-09 5.6E-14 106.9 7.8 79 29-114 236-315 (444)
53 3isx_A Endoglucanase; TM1050, 98.8 1.1E-08 3.9E-13 96.9 7.5 51 1-54 26-76 (343)
54 1q7l_B Aminoacylase-1; catalys 98.7 1.2E-08 4E-13 77.2 5.8 73 325-407 2-78 (88)
55 3fed_A Glutamate carboxypeptid 98.6 1E-07 3.5E-12 98.4 8.5 79 29-115 313-394 (707)
56 3kas_A Transferrin receptor pr 98.4 3.2E-07 1.1E-11 93.8 8.3 80 29-116 267-350 (640)
57 2vpu_A TET3, 354AA long hypoth 96.1 0.0092 3.1E-07 56.6 7.0 78 321-407 266-347 (354)
58 3isx_A Endoglucanase; TM1050, 95.5 0.017 6E-07 54.3 5.9 76 321-405 264-342 (343)
59 3k9t_A Putative peptidase; str 94.8 0.082 2.8E-06 50.5 8.2 62 35-113 174-235 (435)
60 2ijz_A Probable M18-family ami 90.4 0.12 4.2E-06 50.0 2.7 77 322-406 343-424 (428)
61 1y7e_A Probable M18-family ami 86.6 0.35 1.2E-05 47.2 3.1 76 322-405 377-457 (458)
62 2glf_A Probable M18-family ami 84.7 1.6 5.6E-05 42.3 6.7 78 322-407 368-450 (450)
63 2glf_A Probable M18-family ami 82.6 1.6 5.3E-05 42.5 5.6 53 2-54 30-96 (450)
64 3h8g_F Cytosol aminopeptidase; 82.3 9 0.00031 37.4 10.8 89 7-99 201-323 (497)
65 3vat_A Dnpep, aspartyl aminope 81.5 2.5 8.7E-05 41.4 6.6 78 322-407 404-486 (496)
66 3kzw_A Cytosol aminopeptidase; 79.1 5.5 0.00019 38.9 8.0 89 7-99 218-339 (515)
67 1y7e_A Probable M18-family ami 77.6 1.6 5.6E-05 42.5 3.9 52 2-54 32-99 (458)
68 3pei_A Cytosol aminopeptidase; 76.6 12 0.0004 36.5 9.5 89 7-99 185-307 (486)
69 2hc9_A Leucine aminopeptidase 76.2 26 0.00088 34.1 11.7 89 7-100 188-309 (491)
70 1gyt_A Cytosol aminopeptidase; 75.3 18 0.00062 35.4 10.6 90 7-100 202-327 (503)
71 1lam_A Leucine aminopeptidase; 74.6 22 0.00075 34.6 10.9 89 7-99 182-306 (484)
72 4eme_A M18 aspartyl aminopepti 73.3 7 0.00024 38.9 7.1 84 322-407 472-560 (571)
73 3mru_A Aminoacyl-histidine dip 73.3 6.7 0.00023 38.5 7.1 50 251-307 347-396 (490)
74 3jru_B Probable cytosol aminop 72.6 23 0.00077 34.5 10.4 88 7-99 197-318 (490)
75 4efd_A Aminopeptidase; structu 70.5 27 0.00093 34.1 10.3 88 7-99 225-346 (522)
76 2ijz_A Probable M18-family ami 69.1 2.5 8.7E-05 40.7 2.9 53 2-54 15-85 (428)
77 3kr4_A M17 leucyl aminopeptida 59.2 60 0.002 31.8 10.3 89 8-99 227-350 (528)
78 1tkj_A Aminopeptidase, SGAP; d 57.2 64 0.0022 28.6 9.9 78 323-407 175-275 (284)
79 3ij3_A Cytosol aminopeptidase; 52.2 59 0.002 31.4 8.9 87 7-99 188-306 (482)
80 2glj_A Probable M18-family ami 50.7 6.1 0.00021 38.4 1.9 76 322-405 380-460 (461)
81 2jvf_A De novo protein M7; tet 37.6 44 0.0015 22.8 4.0 28 273-300 17-44 (96)
82 2glj_A Probable M18-family ami 36.7 16 0.00056 35.4 2.5 36 59-100 259-294 (461)
83 2ek8_A Aminopeptidase; metallo 35.9 67 0.0023 30.4 6.8 51 356-407 344-399 (421)
84 4f9u_A CG32412; alpha/beta hyd 35.6 35 0.0012 30.9 4.5 52 357-408 243-298 (312)
85 4eme_A M18 aspartyl aminopepti 28.1 83 0.0029 31.2 5.9 52 2-54 20-91 (571)
86 2zvy_A Chemotaxis protein MOTB 27.2 1.3E+02 0.0044 24.9 6.2 51 44-97 92-147 (183)
87 2qyv_A XAA-His dipeptidase; YP 24.0 1.7E+02 0.0057 28.1 7.4 47 250-303 344-390 (487)
88 3iib_A Peptidase M28; YP_92679 22.9 77 0.0026 30.3 4.6 53 355-407 372-430 (444)
89 1x9z_A DNA mismatch repair pro 22.3 1.2E+02 0.004 25.1 5.1 26 1-26 65-90 (188)
90 1kaf_A Transcription regulator 20.6 1.4E+02 0.0049 22.3 4.5 35 1-35 3-39 (108)
91 3pb6_X Glutaminyl-peptide cycl 20.3 96 0.0033 28.4 4.4 53 356-408 272-328 (330)
No 1
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=1.1e-52 Score=414.43 Aligned_cols=376 Identities=36% Similarity=0.634 Sum_probs=319.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccCCCCCCChHHHHHHHHHHHHHHhcC
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~G~~D~k~~ia~~l~a~~~l~~~~ 80 (408)
+|++|.++++||.++|+++|++++.+..+|++++++|+++++|+|+|.+|||+||.+|.+|+|++++++|.+++.|++++
T Consensus 30 ~s~~e~~~~~~l~~~l~~~g~~~~~d~~gnv~a~~~g~~~~~~~i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~~ 109 (408)
T 3n5f_A 30 FTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHG 109 (408)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCEEEECTTCCEEEEECCSSTTSCEEEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEcCCCCEEEEecCCCCCCCEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 47999999999999999999999988889999999887544699999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCCCcchhhhhhccCCCCCceee
Q 015341 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGY 160 (408)
Q Consensus 81 ~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 160 (408)
. +++++|.|+|+++||.++|+.++.|++.+++.++..++.+.|.+|+.+.+.+.+.|++.+. +......+..+.++
T Consensus 110 ~--~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~--~~~~~~~~~~~~~~ 185 (408)
T 3n5f_A 110 V--VTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDR--LPQAARKPGTVKAY 185 (408)
T ss_dssp C--CCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGG--GGGGCCCTTTEEEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhh--hhhcccCccCccEE
Confidence 6 7999999999999997544445679999998777655566788999999999888876421 00001122356778
Q ss_pred EEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCC
Q 015341 161 IEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRS 240 (408)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~ 240 (408)
+++|+++++++++.+.+.+++.+.+|..+++|+++|+++|+|..||+.++||+..+++++.+|+++..+
T Consensus 186 ~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~~~----------- 254 (408)
T 3n5f_A 186 VELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----------- 254 (408)
T ss_dssp EEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHHHH-----------
T ss_pred EEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHHHh-----------
Confidence 889999987777666667888899999999999999999995448448999999999999999987631
Q ss_pred CCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCc
Q 015341 241 NCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV 320 (408)
Q Consensus 241 ~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (408)
.. +++++++.|++++.+.|+||++|++++++|++|.++.+++.++|+++++.++..+++++++++...+||+
T Consensus 255 -------~~-~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~~~~p~~ 326 (408)
T 3n5f_A 255 -------TG-TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPPV 326 (408)
T ss_dssp -------HS-SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECCE
T ss_pred -------cC-CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCc
Confidence 21 6789999999934899999999999999999999999999999999999988889999999988888999
Q ss_pred cCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhhcCeeEEEEecCCCCCCCCCCCCChhhHHHHHHHH
Q 015341 321 MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAV 400 (408)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~ 400 (408)
.+++++++.+++++++. |.+ .... .++|++|+++|.+.+|++++|+|..++..|+|||+++++++..++++|
T Consensus 327 ~~d~~l~~~~~~a~~~~-g~~-----~~~~--~~~ggtD~~~~~~~iP~~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~ 398 (408)
T 3n5f_A 327 LCSDEVKRAAEAACQKL-GYP-----SFWL--PSGAAHDSVQLAPICPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVL 398 (408)
T ss_dssp ECCHHHHHHHHHHHHHH-TCC-----CCEE--EESSCCTTTTTTTTSCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCC-----cccC--CCcCchHHHHHHHHCCEEEEEeCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 89999999999999886 642 1122 245899999998889998888777666799999999999999999999
Q ss_pred HHHHHhh
Q 015341 401 LAFLETH 407 (408)
Q Consensus 401 ~~~l~~l 407 (408)
..++.+|
T Consensus 399 ~~~~~~l 405 (408)
T 3n5f_A 399 YHTVWQL 405 (408)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 2
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=2.2e-50 Score=400.07 Aligned_cols=375 Identities=32% Similarity=0.479 Sum_probs=308.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccCCCCCCChHHHHHHHHHHHHHHhcC
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~G~~D~k~~ia~~l~a~~~l~~~~ 80 (408)
+|++|+++++||.++|+++||+++.+..+|++++++|+++++|+|+|++||||||.+|..|||++++++|.|+++|++.+
T Consensus 34 ~s~~e~~~~~~i~~~l~~~G~~v~~~~~gnv~a~~~g~~~~~~~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~~ 113 (423)
T 1z2l_A 34 YSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQY 113 (423)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEECTTSCEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEecCCcEEEEEcCCCCCCCEEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999888888999999876443489999999999999999999999999999999999987
Q ss_pred CCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCc-cccccccCCCCcHHHHHHhCCCCcchhhhhhccCCCCCcee
Q 015341 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV-SALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (408)
Q Consensus 81 ~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (408)
. +++++|.|+|+++||.++|+.++.|++.+...+.. ..+.+.+.|++.+.+.+.+.|+... +.. ....+.+.+
T Consensus 114 ~--~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~-~~~---p~~~~~~~~ 187 (423)
T 1z2l_A 114 G--APLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLP-NAP---LTPRQDIKA 187 (423)
T ss_dssp C--SCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCC-SSC---CCCCCCEEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccc-ccc---ccCCCCceE
Confidence 6 78999999999999986443346699999876553 2334457899999888877776310 000 000123556
Q ss_pred eEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCC
Q 015341 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 239 (408)
++++|++++.+.++.+.+.+++.+.+|..+++|+++|+++|||..||+.++||+..+++++..|+++..+.
T Consensus 188 ~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~--------- 258 (423)
T 1z2l_A 188 FVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRM--------- 258 (423)
T ss_dssp EEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH---------
T ss_pred EEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHhc---------
Confidence 67789988766555555567888899999999999999999995482279999999999999998775420
Q ss_pred CCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCC
Q 015341 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANA 319 (408)
Q Consensus 240 ~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (408)
+| .++++++.|++++.+.|+||++|++++++|++|.++.+++.++|+++++..+..++++++++....+||
T Consensus 259 ------~~---~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~~~~~~ 329 (423)
T 1z2l_A 259 ------GD---PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEP 329 (423)
T ss_dssp ------CT---TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECC
T ss_pred ------CC---CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCC
Confidence 12 578999999984489999999999999999999999999999999999988888999988887778888
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhhcCeeEEEEecCCCCCCCCCCCCChhhHHHHHHH
Q 015341 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLA 399 (408)
Q Consensus 320 ~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~~~ 399 (408)
+.+++++++.++++++++ |.+ .....++|++|+++|...+|++++|+|..++..|++||+++++++.+++++
T Consensus 330 ~~~~~~l~~~~~~~~~~~-g~~-------~~~~~~~ggtD~~~~~~~~p~~~~~~p~~~~~~H~~~E~i~~~~l~~~~~~ 401 (423)
T 1z2l_A 330 VPMNKELVATLTELCERE-KLN-------YRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKT 401 (423)
T ss_dssp EECCHHHHHHHHHHHHHT-TCC-------EEEEEESSCCTHHHHTTTSCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHc-CCC-------eEEecCCCcccHHHHHhhCCEEEEEeCCCCCCCCCccccCCHHHHHHHHHH
Confidence 888999999999999886 542 112234689999999888999877766655679999999999999999999
Q ss_pred HHHHHHhh
Q 015341 400 VLAFLETH 407 (408)
Q Consensus 400 ~~~~l~~l 407 (408)
|..++.++
T Consensus 402 ~~~~~~~l 409 (423)
T 1z2l_A 402 LALMLYQL 409 (423)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999876
No 3
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=5.4e-50 Score=402.17 Aligned_cols=370 Identities=26% Similarity=0.381 Sum_probs=306.5
Q ss_pred CHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccCCCCCCChHHHHHHHHHHHHHHhcCC
Q 015341 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGK 81 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~G~~D~k~~ia~~l~a~~~l~~~~~ 81 (408)
|++|.++++||.++|+++||+++++..+|++++++|+++ +++|+|++||||||.+|..|||++++++|.|+++|++.++
T Consensus 66 s~~e~~~~~~l~~~l~~~G~~v~~d~~gnvia~~~g~~~-~~~i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~~~ 144 (474)
T 2v8h_A 66 TALDGAMRDWFTNECESLGCKVKVDKIGNMFAVYPGKNG-GKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDNNY 144 (474)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEBTTCCEEEEECCSSC-CSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEecCceEEEEECCCCC-CCeEEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999988888999999987653 3699999999999999989999999999999999999987
Q ss_pred CCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccc-ccccc---CCCCcHHHHHHhCCCCcchhhhhhccCCCCCc
Q 015341 82 LGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA-LRVSD---KSGVTVLDALRENSIDIAEESLLQLKYDPASV 157 (408)
Q Consensus 82 ~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~-~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 157 (408)
+++++|.|+|+++||+++|+.++.|++.+.+.+.... ..+.| .||+.+.+.+.+.|+..+.+. ....+.+
T Consensus 145 --~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~----~~~~e~~ 218 (474)
T 2v8h_A 145 --VPNYDVCVVVWFNAEGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPA----SYKENEI 218 (474)
T ss_dssp --CCSSCEEEEECTTCSCSSSSCTTHHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCS----CTTTSCC
T ss_pred --CCCCCEEEEEECCccCCCCCCCcccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccc----cccccch
Confidence 7899999999999998654445679999986544321 12234 788888877766666421000 1113456
Q ss_pred eeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHcCCCCcccc
Q 015341 158 WGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAELIVLLERLCKHPKDFLSY 236 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~ 236 (408)
.+++++|++++.+.+..+...+++.+.+|..+++|+++|+++|||..| + .++||+..+++++..|+.+..+
T Consensus 219 ~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P-~~~g~nAi~~~a~~i~~l~~~~~~------- 290 (474)
T 2v8h_A 219 DAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTP-WRLRKDALLMSSKMIVAASEIAQR------- 290 (474)
T ss_dssp SEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCC-GGGCCCHHHHHHHHHHHHHHHHHH-------
T ss_pred hhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCC-cccCCCHHHHHHHHHHHHHHHHhh-------
Confidence 677889999887766665567788889999999999999999999658 5 7999999999999999876542
Q ss_pred CCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHH---cCCeEEEEE
Q 015341 237 DGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK---RSVSCIVER 313 (408)
Q Consensus 237 ~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~---~~~~~~~~~ 313 (408)
. .++++++.|++++.+.|+||++|++++++|++|.++.+++.++|+++++..+.. ++++++++.
T Consensus 291 -----------~--~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~g~~~~~~~ 357 (474)
T 2v8h_A 291 -----------H--NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESET 357 (474)
T ss_dssp -----------T--TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCTTCCCEEEEEE
T ss_pred -----------c--CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcccCCcEEEEEE
Confidence 1 568999999993389999999999999999999999999999999999887666 788888887
Q ss_pred eecCCCccCCHHHHHHHHHHHHHHHh-h-ccCCccccccccCCccchHHHHhhhhcCeeEEEEecCCCCCCCCCCCCChh
Q 015341 314 KHDANAVMCDADLSSQLKSASYAALK-R-MTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDD 391 (408)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~~~~~~~g-~-~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~~~~~~H~~~E~i~i~ 391 (408)
...+||+.+++++++.++++++++ | . + .....++|++|+++|+..+|+++.|+|...+..|+|||+++++
T Consensus 358 ~~~~~~~~~d~~l~~~~~~a~~~~-G~~~~-------~~~~~~~ggtD~~~~~~~~P~~~~fgp~~~~~~H~p~E~i~~~ 429 (474)
T 2v8h_A 358 LQVSPAVNFHEVCIECVSRSAFAQ-FKKDQ-------VRQIWSGAGHDSCQTAPHVPTSMIFIPSKDGLSHNYYEYSSPE 429 (474)
T ss_dssp EEEECCEECCHHHHHHHHHHHHHH-SCGGG-------EEEEEESSCCTHHHHTTTSCEEEEEECCGGGCCSSTTCCCCHH
T ss_pred ecCCCCccCCHHHHHHHHHHHHHc-CCCCc-------ceecCCcCCccHHHHHhhCCEEEEEeCCCCCCCCCccccCCHH
Confidence 778888888999999999999887 6 4 3 1112346899999999889998777665556799999999999
Q ss_pred hHHHHHHHHHHHHHhh
Q 015341 392 DVWAAGLAVLAFLETH 407 (408)
Q Consensus 392 ~~~~~~~~~~~~l~~l 407 (408)
++.+++++|..++.++
T Consensus 430 ~l~~~~~~~~~~l~~l 445 (474)
T 2v8h_A 430 EIENGFKVLLQAIINY 445 (474)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998876
No 4
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.1e-45 Score=363.94 Aligned_cols=333 Identities=18% Similarity=0.233 Sum_probs=259.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccC--cEEEEecCCCCCCCeEEEeeccccccCC------------C---CCCCh
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG--NVHGRVEGLNASAQALLIGSHLDTVVDA------------G---IFDGS 63 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~--nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------G---~~D~k 63 (408)
+|++|.++++||.++|+++|++++.+..+ |++++++|+++ +|+|+|++|+||||.+ | +.++|
T Consensus 47 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~-~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~k 125 (404)
T 1ysj_A 47 LSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGRED-GPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHD 125 (404)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSC-CCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHH
T ss_pred CCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCC-CCEEEEEEecccccCCCCCCCCcccCCCCceEcCcCh
Confidence 47889999999999999999998766554 99999987643 5899999999999964 2 23568
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCCCcc
Q 015341 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (408)
Q Consensus 64 ~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 143 (408)
++++++|.|+++|++.+. +++++|.|+|+++||.+ .|++.+++. |.
T Consensus 126 g~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~------~G~~~~~~~-----------------------g~--- 171 (404)
T 1ysj_A 126 FHTASIIGTAMLLNQRRA--ELKGTVRFIFQPAEEIA------AGARKVLEA-----------------------GV--- 171 (404)
T ss_dssp HHHHHHHHHHHHHHTCGG--GCSSEEEEEEESCTTTT------CHHHHHHHT-----------------------TT---
T ss_pred HHHHHHHHHHHHHHhccc--cCCceEEEEEecccccc------hhHHHHHhc-----------------------CC---
Confidence 999999999999999865 78999999999999973 599887521 10
Q ss_pred hhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEe--eeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 015341 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQG--IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~ 221 (408)
+ +.+.+++.+|.+|+...+.. ....| .+|..+++|+++|+++|||. | +.|.||+..+++++.
T Consensus 172 --------~--~~~d~~i~~h~ep~~~~g~v----~~~~g~~~~g~~~~~i~v~G~~~Has~-P-~~g~nAi~~~~~~i~ 235 (404)
T 1ysj_A 172 --------L--NGVSAIFGMHNKPDLPVGTI----GVKEGPLMASVDRFEIVIKGKGGHASI-P-NNSIDPIAAAGQIIS 235 (404)
T ss_dssp --------T--TTEEEEEEEEEETTSCTTEE----EECSEEEECCEEEEEEEEECC----------CCCCHHHHHHHHHH
T ss_pred --------C--cCCCEEEEEecCCCCCCceE----EeccChhhcccceEEEEEEccCccccC-c-ccCCCHHHHHHHHHH
Confidence 0 11233444677654221111 11123 67899999999999999997 9 699999999999999
Q ss_pred HHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHH
Q 015341 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQI 301 (408)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~ 301 (408)
+|+++..+.. +|. .+++++++.|++ |.+.|+||++|++++++|++|.++.+++.++|+++++..
T Consensus 236 ~l~~~~~~~~--------------~~~-~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~ 299 (404)
T 1ysj_A 236 GLQSVVSRNI--------------SSL-QNAVVSITRVQA-GTSWNVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGI 299 (404)
T ss_dssp HHC--------------------------CCEEEEEEEEE-CSCSSSCCSEEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhc--------------CCC-CCcEEEEEEEEc-CCCCceecCceEEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 9876643211 133 377999999999 899999999999999999999999999999999999988
Q ss_pred HHHcCCeEEEEEeecCCCccCCHHHHHHHHHHHHHH-HhhccCCccccccccCCccchHHHHhhhhcCeeEEEEecCC-C
Q 015341 302 CEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAA-LKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRG-G 379 (408)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~~~-~ 379 (408)
+..+++++++++...+||+.+++++++.+.+++++. +|.++ .. .++|++|+++|...+|++++++|+++ .
T Consensus 300 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~g~~~------~~--~~~g~tD~~~~~~~~p~~~~~~G~~~~~ 371 (404)
T 1ysj_A 300 AAGYGAQAEFKWFPYLPSVQNDGTFLNAASEAAARLGYQTVH------AE--QSPGGEDFALYQEKIPGFFVWMGTNGTE 371 (404)
T ss_dssp HHHTTCEEEEEEEEEECCEEECGGGHHHHHHHHHHTTCEEEE------CC--CBSSCCTHHHHHTTSCEEEEEEECCCSS
T ss_pred HHHhCCEEEEEEecCCCCccCCHHHHHHHHHHHHHhcCCccc------cc--cCCccchHHHHHHHCCeEEEEEcCCCCC
Confidence 888999998887778888888888999999999887 66531 11 34589999999888998877778877 5
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHhhC
Q 015341 380 ISHSPAEHVLDDDVWAAGLAVLAFLETHV 408 (408)
Q Consensus 380 ~~H~~~E~i~i~~~~~~~~~~~~~l~~l~ 408 (408)
.+|++||+++++++.+++++|..++.+++
T Consensus 372 ~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 400 (404)
T 1ysj_A 372 EWHHPAFTLDEEALTVASQYFAELAVIVL 400 (404)
T ss_dssp CTTCTTCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999998763
No 5
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=2.1e-44 Score=358.82 Aligned_cols=331 Identities=15% Similarity=0.129 Sum_probs=253.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEc----------------------------------------ccCcEEEEecCCCC
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVD----------------------------------------HLGNVHGRVEGLNA 40 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~----------------------------------------~~~nvia~~~g~~~ 40 (408)
+|++|.++++||.++|+++||+++.. ...||+|+++|+.+
T Consensus 29 ~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vva~~~~~~~ 108 (445)
T 3io1_A 29 SGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRP 108 (445)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGGGTTTCCCEEEEEECSSC
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccccccccccccccCCCCEEEEEEeCCCC
Confidence 58999999999999999999998764 23589999987653
Q ss_pred CCCeEEEeeccccccCC------------------------CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecc
Q 015341 41 SAQALLIGSHLDTVVDA------------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSD 96 (408)
Q Consensus 41 ~~~~i~l~~H~D~Vp~~------------------------G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~ 96 (408)
+|+|+|++|||+||.. |++| ++++++|.|++.|++.+. +++++|+|+|+++
T Consensus 109 -g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd--~~~a~~l~aa~~L~~~~~--~~~g~v~l~f~p~ 183 (445)
T 3io1_A 109 -GPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHD--GHTAIGLGLAHVLKQYAA--QLNGVIKLIFQPA 183 (445)
T ss_dssp -CCEEEEEEECCCCCC-------------------------CTTC--THHHHHHHHHHHHHHTGG--GCCSEEEEEEESC
T ss_pred -CCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCch--HHHHHHHHHHHHHHhCcC--cCCceEEEEEecc
Confidence 5999999999999942 3444 568888999999998875 7999999999999
Q ss_pred ccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCC
Q 015341 97 EEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGF 176 (408)
Q Consensus 97 EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (408)
||.+ .|++.+++. |.. .++| +++.+|..++.+.+.
T Consensus 184 EE~~------~Ga~~~i~~-----------------------g~~----------~~~d---~~~~~h~~~~~~~g~--- 218 (445)
T 3io1_A 184 EEGT------RGARAMVAA-----------------------GVV----------DDVD---YFTAIHIGTGVPAGT--- 218 (445)
T ss_dssp TTTT------CHHHHHHHT-----------------------TTT----------TTCS---EEEEEEEEEEEETTB---
T ss_pred cccc------chHHHHHHc-----------------------CCc----------cccc---eeEEEeccCCCCCCe---
Confidence 9964 589887621 110 0122 223367543222111
Q ss_pred cceeEEeee---eceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeE
Q 015341 177 PLGVVQGIA---GQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLV 253 (408)
Q Consensus 177 ~~~~~~~~~---g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 253 (408)
+..+.+ +..+++|+++|+++|+|..| +.|+||+.++++++.+|+.+.. . ..+.++
T Consensus 219 ---i~~~~~g~~a~~~~~i~v~Gk~~HaGs~P-~~g~nAi~~aa~~i~~l~~l~~-~-----------------~~~~~~ 276 (445)
T 3io1_A 219 ---VVCGGDNFMATTKFDVQFSGVAAHAGGKP-EDGRNALLAAAQAALGLHAIPP-H-----------------SAGASR 276 (445)
T ss_dssp ---EESCCCCBCEEEEEEEEEECCCSSTTCCG-GGCCCHHHHHHHHHHHHHTCCC-B-----------------TTBCEE
T ss_pred ---EEEecCCeeEEEEEEEEEEeecCCCCCCC-cCCcCHHHHHHHHHHHHHHHHh-h-----------------cCCCeE
Confidence 222223 34799999999999995449 6999999999999999987632 1 113688
Q ss_pred EEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCccCCHHHHHHHHHH
Q 015341 254 CTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSA 333 (408)
Q Consensus 254 ~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 333 (408)
++++.|++ |.+.|+||++|++++++|+.|.++.+++.++|+++++.++..+++++++++...+|++.+++++++.++++
T Consensus 277 ~~vg~i~g-G~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~~d~~l~~~~~~a 355 (445)
T 3io1_A 277 VNVGVMQA-GTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAMYEARYELRMMGAATASAPSPAWVDYLREQ 355 (445)
T ss_dssp EEEEEEEE-CSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECCCCCCHHHHHHHHHH
T ss_pred EEEEEEec-CCCCceeCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCcCCCHHHHHHHHHH
Confidence 99999999 89999999999999999999999999999999999999998999999999888889999999999999999
Q ss_pred HHHHHhhccCCccccccccCCccchHHHHhhhhcC-----eeEEEEecCC-CCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 334 SYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTK-----VGMLFVRCRG-GISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 334 ~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p-----~~~~~~g~~~-~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
+++++|.++ + ..... ..+|++|+++|.+.+| .+++++|+++ ...|+|||+++++++..++++|..++.++
T Consensus 356 ~~~~~g~~~--v-~~~~~-~~~g~~D~~~~~~~~P~~gg~~~~~~~G~~~~~~~H~~~E~i~~~~l~~g~~~~~~~~~~~ 431 (445)
T 3io1_A 356 AARVPGVQQ--A-VDRIA-APAGSEDATLMMARVQARGGLASYMIFGTELSAGHHNEKFDFDESVMAVAVETLARVALNF 431 (445)
T ss_dssp HHHSTTCCB--C-BSSCC-CCCBCCTHHHHHHHHHHTTCEEEEEEEEEEC-----------CCCHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCcc--c-eecCC-CCccHHHHHHHHHHhcccCCceEEEEEeCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 988766521 1 00111 1258999999988776 5667778764 57899999999999999999999999877
Q ss_pred C
Q 015341 408 V 408 (408)
Q Consensus 408 ~ 408 (408)
+
T Consensus 432 ~ 432 (445)
T 3io1_A 432 P 432 (445)
T ss_dssp C
T ss_pred h
Confidence 4
No 6
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=1.9e-44 Score=356.65 Aligned_cols=334 Identities=18% Similarity=0.202 Sum_probs=250.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcc-cCcEEEEecCCCCCCCeEEEeeccccccCC------------C---CCCChH
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------G---IFDGSL 64 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~-~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------G---~~D~k~ 64 (408)
+|++|+++++||.++|+++||+++.+. .+|++++++|++ . |+|+|++||||||.+ | +.++|+
T Consensus 43 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~-~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~ 120 (418)
T 1xmb_A 43 LGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE-P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120 (418)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSS-S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHH
T ss_pred CCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCC-C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchH
Confidence 478899999999999999999987764 579999997654 2 899999999999964 1 123569
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCCCcch
Q 015341 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (408)
Q Consensus 65 ~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 144 (408)
+++++|.|++.|++.+. +++++|.|+|+++|| ++ .|++.+++. |.
T Consensus 121 ~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE-g~-----~G~~~~~~~-----------------------g~---- 165 (418)
T 1xmb_A 121 HVTMLLGAAKILHEHRH--HLQGTVVLIFQPAEE-GL-----SGAKKMREE-----------------------GA---- 165 (418)
T ss_dssp HHHHHHHHHHHHHHTGG--GCSSEEEEEEECCTT-TT-----CHHHHHHHT-----------------------TT----
T ss_pred HHHHHHHHHHHHHhccc--cCCceEEEEEecccc-cc-----ccHHHHHHc-----------------------CC----
Confidence 99999999999999875 789999999999999 43 699887521 10
Q ss_pred hhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 015341 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (408)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~ 224 (408)
+ +...+++.+|.+++.+.+.. ...+..+++|..+++|+++|+++|||. | +.|+||+.++++++.+|+
T Consensus 166 -------~--~~~d~~i~~~~~~~~~~g~~--~~~~~~~~~g~~~~~i~v~G~~~Has~-P-~~g~nAi~~~a~~i~~l~ 232 (418)
T 1xmb_A 166 -------L--KNVEAIFGIHLSARIPFGKA--ASRAGSFLAGAGVFEAVITGKGGHAAI-P-QHTIDPVVAASSIVLSLQ 232 (418)
T ss_dssp -------T--TTEEEEEEEEEEEEEETTCE--EECSEEEECEEEEEEEEEEEC-----------CCHHHHHHHHHHHHHH
T ss_pred -------c--CCCCEEEEEecCCCCCCcee--EeeeccccccceeEEEEEEecCcccCC-C-ccCCCHHHHHHHHHHHHH
Confidence 0 01223344676543322211 112334689999999999999999996 9 699999999999999998
Q ss_pred HHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHH
Q 015341 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (408)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~ 304 (408)
.+..+.. +|. .+++++++.|+| |.+.|+||++|++++++|++| +.+++.++|+++++..+..
T Consensus 233 ~~~~~~~--------------~~~-~~~t~~vg~i~g-G~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~ 294 (418)
T 1xmb_A 233 QLVSRET--------------DPL-DSKVVTVSKVNG-GNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAV 294 (418)
T ss_dssp TTCBCCS--------------SGG-GCEEEEEEEEC---------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccc--------------CCC-CCcEEEEEEEEe-cCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHH
Confidence 6643211 133 367999999999 899999999999999999999 8999999999999998888
Q ss_pred cCCeEEEEEeec----CCCccCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhhcCeeEEEEecCC--
Q 015341 305 RSVSCIVERKHD----ANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRG-- 378 (408)
Q Consensus 305 ~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~~~-- 378 (408)
+++++++++... +|++.+++++++.+++++++++|.++ + .....++|++|+++|...+|++++++|+++
T Consensus 295 ~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~~~~g~~~--~---~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~ 369 (418)
T 1xmb_A 295 HRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEA--F---VEAAPVMGSEDFSYFAETIPGHFSLLGMQDET 369 (418)
T ss_dssp TTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHHHHHCGGG--E---EECCCBCCCCTHHHHHTTSCEEEEEEEEECTT
T ss_pred hCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHHHhcCCcc--e---eccCCCCCcchHHHHHHHCCEEEEEEeCCCCC
Confidence 899988887666 77778899999999999999887631 0 112234589999999888999876677754
Q ss_pred ---CCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 379 ---GISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 379 ---~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
...|++||+++++++.+++++|..++.++
T Consensus 370 ~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l 401 (418)
T 1xmb_A 370 NGYASSHSPLYRINEDVLPYGAAIHASMAVQY 401 (418)
T ss_dssp CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999998876
No 7
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=2.4e-44 Score=350.83 Aligned_cols=321 Identities=18% Similarity=0.229 Sum_probs=261.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEccc--------CcEEEEecCCCCCCCeEEEeeccccccCCC--------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL--------GNVHGRVEGLNASAQALLIGSHLDTVVDAG-------------- 58 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~--------~nvia~~~g~~~~~~~i~l~~H~D~Vp~~G-------------- 58 (408)
+|++|.++++||.++|+++|++++.+.. +|++++++|+++++|+|+|.+|||+||.++
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~ 100 (373)
T 3gb0_A 21 ETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSD 100 (373)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECC
T ss_pred CCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECC
Confidence 4789999999999999999999988763 699999987633469999999999998542
Q ss_pred C-----CCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHH
Q 015341 59 I-----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLD 133 (408)
Q Consensus 59 ~-----~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~ 133 (408)
+ .|||++++++|.+++.|++.+ .++++|.|+|+++||.+ ..|++.+...
T Consensus 101 G~~~~g~D~k~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~------------------ 154 (373)
T 3gb0_A 101 GTTILGADDKAGLASMFEAIRVLKEKN---IPHGTIEFIITVGEESG-----LVGAKALDRE------------------ 154 (373)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHTT---CCCCCEEEEEESCGGGT-----SHHHHHSCGG------------------
T ss_pred CccccCcccHHHHHHHHHHHHHHHhcC---CCCCCEEEEEEeccccC-----chhhhhhCHH------------------
Confidence 2 399999999999999999987 47899999999999974 3688776310
Q ss_pred HHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHH
Q 015341 134 ALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPM 213 (408)
Q Consensus 134 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai 213 (408)
.+ +..++ +|.+++. ....+..+.+|..+++|+++|+++|+|..| +.|+||+
T Consensus 155 -----------------~~--~~~~~---~~~~~~~------~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p-~~g~nai 205 (373)
T 3gb0_A 155 -----------------RI--TAKYG---YALDSDG------KVGEIVVAAPTQAKVNAIIRGKTAHAGVAP-EKGVSAI 205 (373)
T ss_dssp -----------------GC--CCSEE---EEEEECS------CTTEEEEEECEEEEEEEEEECBCCBTTTCG-GGSBCHH
T ss_pred -----------------hc--CCCEE---EEEcCCC------CCCeEEEcCCCcEEEEEEEEeEecCCCCCh-hhCcCHH
Confidence 01 11233 3544321 123567788999999999999999999449 6999999
Q ss_pred HHHHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHH
Q 015341 214 TAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYE 293 (408)
Q Consensus 214 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~ 293 (408)
..+++++.+|+.. + . + ..++++++.|++ |.+.|+||++|++.+++|++|.++.+++.++
T Consensus 206 ~~~~~~i~~l~~~--~-~---------------~--~~~~~~vg~i~g-G~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~ 264 (373)
T 3gb0_A 206 TIAAKAIAKMPLG--R-I---------------D--SETTANIGRFEG-GTQTNIVCDHVQIFAEARSLINEKMEAQVAK 264 (373)
T ss_dssp HHHHHHHTTSCCE--E-E---------------E--TTEEEEEEEEEE-CSCTTBCCCEEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcccc--c-C---------------C--CccccceeEEec-CcccccccceEEEEEEEecCCHHHHHHHHHH
Confidence 9999999876531 0 0 1 267899999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEEeecCCCcc--CCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhh-cCee
Q 015341 294 LSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVG 370 (408)
Q Consensus 294 i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~ 370 (408)
|+++++..+..+++++++++...+||+. +++++++.+.+++++ +|.+ .....++|++|+++|... +|++
T Consensus 265 i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~-------~~~~~~~g~~D~~~~~~~gip~~ 336 (373)
T 3gb0_A 265 MKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEK-IGRT-------PSLHQSGGGSDANVIAGHGIPTV 336 (373)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEECCEECCTTCHHHHHHHHHHHH-TTCC-------CEEEECSSCCHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhcCCeEEEEEecccCCcccCCCCHHHHHHHHHHHH-hCCC-------ceEecccCcchHHHHHhCCCCEE
Confidence 9999999988999999998888888874 578899999998887 4542 122234589999999887 8887
Q ss_pred EEEEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 371 MLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 371 ~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
++ |++....|+|||+++++++.+++++|..++.++
T Consensus 337 ~~--g~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 337 NL--AVGYEEIHTTNEKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp EE--ECCCBSTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred Ee--cCCCCcCcCCceEEEHHHHHHHHHHHHHHHHHh
Confidence 53 555567999999999999999999999999865
No 8
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.5e-44 Score=350.49 Aligned_cols=320 Identities=17% Similarity=0.201 Sum_probs=260.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcc--------cCcEEEEecCC--CCCCCeEEEeeccccccCC-------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGL--NASAQALLIGSHLDTVVDA------------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~--------~~nvia~~~g~--~~~~~~i~l~~H~D~Vp~~------------- 57 (408)
+|++|.++++||.++|+++|++++.+. .+||+++++|+ ++++|+|+|++||||||.+
T Consensus 39 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~ 118 (396)
T 3rza_A 39 ETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYI 118 (396)
T ss_dssp BTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEE
T ss_pred CCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEE
Confidence 478899999999999999999998875 36899999875 2246999999999999853
Q ss_pred --CC-----CCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCc
Q 015341 58 --GI-----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (408)
Q Consensus 58 --G~-----~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~ 130 (408)
++ .|||++++++|.|+++|++.+ .++++|.|+|+++||.+ ..|++.+...
T Consensus 119 ~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~--------------- 175 (396)
T 3rza_A 119 YSDGTTILGADDKAGLAAMLEVLQVIKEQQ---IPHGQIQFVITVGEESG-----LIGAKELNSE--------------- 175 (396)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHHHT---CCCCCEEEEEESCGGGT-----SHHHHHCCGG---------------
T ss_pred ECCCccccCcccHHHHHHHHHHHHHHHhcC---CCCCCEEEEEEcccccc-----cHhHhhhchh---------------
Confidence 23 399999999999999999987 46899999999999984 3688765310
Q ss_pred HHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCC
Q 015341 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (408)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~ 210 (408)
.+ +..++ +|.+++.. ...++.+.+|..+++|+++|+++|+|. | +.|+
T Consensus 176 --------------------~~--~~~~~---~~~~~~~~------~g~i~~~~~g~~~~~i~v~G~~~Ha~~-p-~~g~ 222 (396)
T 3rza_A 176 --------------------LL--DADFG---YAIDASAD------VGTTVVGAPTQMLISAKIIGKTAHAST-P-KEGV 222 (396)
T ss_dssp --------------------GC--CCSEE---EEEEESSC------TTCEEEEECEEEEEEEEEECBCCBTTS-G-GGSB
T ss_pred --------------------hc--ccceE---EEEecCCC------cceEEEcCCceEEEEEEEEeEecCCCC-c-cccc
Confidence 01 11233 45543211 134677889999999999999999996 9 6999
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHH
Q 015341 211 DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETV 290 (408)
Q Consensus 211 nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v 290 (408)
||+..+++++.+|+... ....++++++.|++ |.+.|+||++|++++++|++|.++.+++
T Consensus 223 nai~~~~~~i~~l~~~~--------------------~~~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~~~~~~ 281 (396)
T 3rza_A 223 SAINIAAKAISRMKLGQ--------------------VDEITTANIGKFHG-GSATNIVADEVILEAEARSHDPERIKTQ 281 (396)
T ss_dssp CHHHHHHHHHHHSCCEE--------------------EETTEEEEEEEEEE-CSCTTBCCCEEEEEEEEEESSHHHHHHH
T ss_pred cHHHHHHHHHHhcccCC--------------------CCCCceeeeeEEec-CCCCcccCceEEEEEEEEeCCHHHHHHH
Confidence 99999999998875311 01267899999999 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEEeecCCCcc--CCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhh-c
Q 015341 291 LYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-T 367 (408)
Q Consensus 291 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~ 367 (408)
.++|+++++..+..+++++++++...+||+. +++++++.+++++++ +|.+ .....++|++|+++|... +
T Consensus 282 ~~~i~~~~~~~a~~~g~~~~i~~~~~~p~~~~~~d~~l~~~~~~~~~~-~g~~-------~~~~~~~g~tD~~~~~~~gi 353 (396)
T 3rza_A 282 VKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARN-LGLS-------ANTIISGGGSDGSIINTFGI 353 (396)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEEECCEECCTTSHHHHHHHHHHHH-TTCC-------CCEEECSSCCHHHHHGGGTC
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEeccCCcccCCCcHHHHHHHHHHHH-cCCC-------ceecccceeccHHHHhhCCC
Confidence 9999999999988899999998888888874 578899999998877 4542 122234589999999887 8
Q ss_pred CeeEEEEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 368 KVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 368 p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
|++++ |++....|+|||+++++++..++++|..++.++
T Consensus 354 P~~~~--g~g~~~~H~~~E~v~~~~l~~~~~~~~~~~~~l 391 (396)
T 3rza_A 354 PSVIL--GVGYEKIHTTNERMPIKSLNLLASQVLEIIKIV 391 (396)
T ss_dssp CEEEE--ECCCBSTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred cEEEE--CCCCCCCCCCcceeEHHHHHHHHHHHHHHHHHH
Confidence 88753 555567999999999999999999999999775
No 9
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=4e-44 Score=351.30 Aligned_cols=325 Identities=11% Similarity=0.048 Sum_probs=262.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccC---cEEEEecCCCCCCCeEEEeecccccc---CCCCCCChHHHHHHHHHHH
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG---NVHGRVEGLNASAQALLIGSHLDTVV---DAGIFDGSLGIITAISALK 74 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~---nvia~~~g~~~~~~~i~l~~H~D~Vp---~~G~~D~k~~ia~~l~a~~ 74 (408)
+|++|.++++||.++|+++||+++.+..+ |++++++|..+ +|+|+|.+|||||| ++|++|+|+++ +|.|++
T Consensus 31 ~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~-g~~i~l~ah~D~vpg~~ha~G~d~~~a~--~l~aa~ 107 (394)
T 3ram_A 31 LGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLD-GPAIGFLAEYDALPGLGHACGHNIIGTA--SVLGAI 107 (394)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSS-SCEEEEEECCCCCTTTSSTTCHHHHHHH--HHHHHH
T ss_pred CCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCC-CCEEEEEEecccCCCcceECCccHHHHH--HHHHHH
Confidence 58899999999999999999998876544 89999987653 59999999999999 56788998754 588999
Q ss_pred HHHhcCCCCCCCCCEEEEEeccccccccCCCCcchH-HHhccCCccccccccCCCCcHHHHHHhCCCCcchhhhhhccCC
Q 015341 75 VLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSA-ALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYD 153 (408)
Q Consensus 75 ~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 153 (408)
.|++.+. +++++|.|+|+++||.+. ..|++ .+++ +++.
T Consensus 108 ~L~~~~~--~~~g~v~~~f~~~EE~~~----~~Ga~~~~~~------------------~g~~----------------- 146 (394)
T 3ram_A 108 GLKQVID--QIGGKVVVLGCPAEEGGE----NGSAKASYVK------------------AGVI----------------- 146 (394)
T ss_dssp HHHTTHH--HHCSEEEEEECCCTTCCT----TCCHHHHHHH------------------HTGG-----------------
T ss_pred HHHHhHh--hCCceEEEEEECCccCCC----CCchHHHHHH------------------cCCc-----------------
Confidence 9988754 689999999999999741 25888 7642 1100
Q ss_pred CCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHcCCCC
Q 015341 154 PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAG-TVPMSMRQDPMTAAAELIVLLERLCKHPKD 232 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~-~~p~~~g~nai~~~~~~i~~l~~~~~~~~~ 232 (408)
+.+.+++..|.+++.. +..+.+|..+++|+++|+++|+| . | +.|+||+..+++++..|+.+....
T Consensus 147 -~~~d~~~~~h~~~~~~---------~~~~~~g~~~~~i~v~Gk~~Ha~~~-P-~~g~nAi~~a~~~i~~l~~l~~~~-- 212 (394)
T 3ram_A 147 -DQIDIALMIHPGNETY---------KTIDTLAVDVLDVKFYGKSAHASEN-A-DEALNALDAMISYFNGVAQLRQHI-- 212 (394)
T ss_dssp -GGCSEEECCEEESSBB---------CCCCBCEEEEEEEEEECBCCBHHHH-G-GGCBCHHHHHHHHHHHHHHHGGGS--
T ss_pred -ccCCEEEEECCccccC---------CCccccceeEEEEEEEccccccCCC-C-cCCCCHHHHHHHHHHHHHHHHhhC--
Confidence 0122233367554311 12247899999999999999999 6 9 689999999999999999875421
Q ss_pred ccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEE
Q 015341 233 FLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVE 312 (408)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 312 (408)
+ ..++++++.+++ |.+.|+||++|++++++|..|.++.+++.++|+++++.++..++++++++
T Consensus 213 --------------~--~~~~~~~~~i~g-G~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~ 275 (394)
T 3ram_A 213 --------------K--KDQRVHGVILDG-GKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFG 275 (394)
T ss_dssp --------------C--TTCEEEEEEEEB-CSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred --------------C--CCCeeEEEEEEC-CCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 1 245678888898 99999999999999999999999999999999999999998999999999
Q ss_pred E-eecCCCccCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhhcCeeEEEEecCCC--CCCCCCCCC-
Q 015341 313 R-KHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGG--ISHSPAEHV- 388 (408)
Q Consensus 313 ~-~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~~~~--~~H~~~E~i- 388 (408)
+ ...+||+.+|+++++.+++++++ +| + .+ .....++|++|+++|++.+|++++|+|++++ ..|+| ||.
T Consensus 276 ~~~~~~~~~~~d~~l~~~~~~a~~~-~G-~--~~---~~~~~~~g~~D~~~~~~~~P~~~~~~g~~~~~~~~H~~-ef~~ 347 (394)
T 3ram_A 276 PIQNGVNEFIKTPKLDDLFAKYAEE-VG-E--AV---IDDDFGYGSTDTGNVSHVVPTIHPHIKIGSRNLVGHTH-RFRE 347 (394)
T ss_dssp ESSCCBCCCCCCHHHHHHHHHHHHH-TT-C--CB---CCSCCCCBCCTHHHHTTTSCBCCCEEECSCTTCCTTSH-HHHH
T ss_pred EecCCCCCccCCHHHHHHHHHHHHH-hC-c--cc---ccCCCCcccccHHHHHHHhchheEEeeecCCCCCCCCH-HHHh
Confidence 8 77889999999999999999887 56 2 11 1122356899999999889999888888764 68999 774
Q ss_pred ------ChhhHHHHHHHHHHHHHhhC
Q 015341 389 ------LDDDVWAAGLAVLAFLETHV 408 (408)
Q Consensus 389 ------~i~~~~~~~~~~~~~l~~l~ 408 (408)
+.+.+..++++++.++.+++
T Consensus 348 ~~~~~~~~~~l~~g~~~la~~~~~~l 373 (394)
T 3ram_A 348 AAASVHGDEALIKGAKIMALMGLELI 373 (394)
T ss_dssp HTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccHHHHHHHHHHHHHHHHHHh
Confidence 88999999999998887653
No 10
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=6.4e-44 Score=354.64 Aligned_cols=334 Identities=16% Similarity=0.138 Sum_probs=258.8
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEc----------------------ccCcEEEEecCCCCCCCeEEEeeccccccCC-
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVD----------------------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~----------------------~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~- 57 (408)
+|++|.++++||.++|+++||+++.. ..+||+++++|.. ++|+|+|++||||||.+
T Consensus 41 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~~-~~~~v~l~aH~D~vp~~~ 119 (433)
T 3pfo_A 41 VRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDG-KGRSLILQGHIDVVPEGP 119 (433)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCCC-CSCCEEEEEECCBCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecCC-CCCEEEEEcccCCcCCCC
Confidence 47889999999999999999998652 2358999998754 46899999999999853
Q ss_pred ---------------------CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccC
Q 015341 58 ---------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (408)
Q Consensus 58 ---------------------G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~ 116 (408)
|..|||++++++|.|+++|++.+. +++++|.|+|+++||.++ .|++.++.
T Consensus 120 ~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~-----~G~~~~~~-- 190 (433)
T 3pfo_A 120 VDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGY--APDARVHVQTVTEEESTG-----NGALSTLM-- 190 (433)
T ss_dssp GGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTE--EESSCEEEEEESCTTTTC-----HHHHHHHH--
T ss_pred cccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCC--CCCccEEEEEEecCccCC-----hhHHHHHh--
Confidence 567999999999999999999886 789999999999999842 57776541
Q ss_pred CccccccccCCCCcHHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEe
Q 015341 117 PVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG 196 (408)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G 196 (408)
.+. .+| ++ +..+| .+ ..++.+.+|..+++|+++|
T Consensus 191 ---------------------~~~------------~~d--~~---i~~ep------~~--~~i~~~~~G~~~~~i~v~G 224 (433)
T 3pfo_A 191 ---------------------RGY------------RAD--AC---LIPEP------TG--HTLTRAQVGAVWFRLRVRG 224 (433)
T ss_dssp ---------------------TTC------------CCS--EE---EECCC------CS--SCEEEEECEEEEEEEEEEC
T ss_pred ---------------------cCC------------CCC--EE---EEeCC------CC--CceEEecceEEEEEEEEEc
Confidence 111 122 12 12222 21 2577789999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEE
Q 015341 197 SQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFT 276 (408)
Q Consensus 197 ~~~Hs~~~p~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~ 276 (408)
+++|+|. | +.|+||+..+++++..|+.+..+.......+..+ .....+++++++.|++ |.+.|+||++|++.
T Consensus 225 ~~~Ha~~-p-~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~~-----~~~~~~~~~~vg~i~g-G~~~NvIP~~a~~~ 296 (433)
T 3pfo_A 225 TPVHVAY-S-ETGTSAILSAMHLIRAFEEYTKELNAQAVRDPWF-----GQVKNPIKFNVGIIKG-GDWASSTAAWCELD 296 (433)
T ss_dssp CCCBGGG-G-GGSCCHHHHHHHHHHHHHHHHHHHHHHGGGCTTT-----TTSSSCSCEEEEEEEE-CSCTTBCCCEEEEE
T ss_pred CCCccCC-C-CcCcCHHHHHHHHHHHHHHHHHHhhhccccCccc-----cccCCCceEEeeeEEC-CCCCcccCcEEEEE
Confidence 9999996 9 6999999999999999988754210000000000 0011356899999999 89999999999999
Q ss_pred EEeeCCChHHHHHHHHHHHHHHHHHHHHcC----CeEEEEEe-ecCCCcc--CCHHHHHHHHHHHHHHHhhccCCccccc
Q 015341 277 VDLRAIDDAGRETVLYELSNQLYQICEKRS----VSCIVERK-HDANAVM--CDADLSSQLKSASYAALKRMTGATQHEI 349 (408)
Q Consensus 277 ~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~----~~~~~~~~-~~~~~~~--~~~~~~~~l~~~~~~~~g~~~~~~~~~~ 349 (408)
+++|++|.++.+++.++|+++++..+..++ +++++++. ..+||+. .++++++.+.+++++++|.+ .
T Consensus 297 ~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~-------~ 369 (433)
T 3pfo_A 297 CRLGLLTGDTPQEAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAP-------L 369 (433)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHHHTTCHHHHHSCCEEEEEEEEECCEECCTTCHHHHHHHHHHHHHHSSC-------C
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhhCcccccCCeEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCC-------C
Confidence 999999999999999999999998775442 44555554 3567664 46789999999999888763 1
Q ss_pred cccCCccchHHHHhhhh--cCeeEEEEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 350 PVIMSGAGHDAMAMSHL--TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 350 ~~~~~~g~tD~~~~~~~--~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
....++|++|+++|... +|+++ +|+++...|++||+++++++.+++++|..++.++
T Consensus 370 ~~~~~~g~~D~~~~~~~~giP~v~--~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~i~~~ 427 (433)
T 3pfo_A 370 DARLSTAVNDTRYYSVDYGIPALC--YGPYGQGPHAFDERIDLESLRKTTLSIALFVAEW 427 (433)
T ss_dssp CEEEESSCCTHHHHHHTTCCCEEE--CCCCEECTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeeeccHHHHHhhCCCCEEE--ECCCCccCCCCCceEEHHHHHHHHHHHHHHHHHH
Confidence 11234589999999874 78763 4666668999999999999999999999999876
No 11
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=8.6e-43 Score=342.21 Aligned_cols=330 Identities=17% Similarity=0.194 Sum_probs=253.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEE---cccCcEEEEecCCCCCCCeEEEeeccccccCC--------------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~---~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~-------------------- 57 (408)
+|++|.++++||.++|+++||+++. +..+|+++++ |+ ++|+|+|++||||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~ 97 (393)
T 1vgy_A 21 VTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRR-GT--KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLY 97 (393)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEE-CC--CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEE
Confidence 4678899999999999999999876 3457999998 64 35899999999999864
Q ss_pred --CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHH
Q 015341 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (408)
Q Consensus 58 --G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~ 135 (408)
|..|||++++++|.|++.|++.+. +++++|.|+|+++||.+ ++.|++.+.+. +
T Consensus 98 grG~~D~k~~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~----~~~Ga~~~~~~-------------------~ 152 (393)
T 1vgy_A 98 GRGAADMKTSIACFVTACERFVAKHP--NHQGSIALLITSDEEGD----ALDGTTKVVDV-------------------L 152 (393)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSC----CTTSHHHHHHH-------------------H
T ss_pred ecCcccchHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEeccccC----CcCCHHHHHHH-------------------H
Confidence 334999999999999999998876 78999999999999974 24699887531 1
Q ss_pred HhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHH
Q 015341 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (408)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~ 215 (408)
...+. .+| .++ ..+|+... ..+ ..+..+.+|..+++|+++|+++|+|. | +.|+||+..
T Consensus 153 ~~~~~------------~~d--~~i---~~e~~~~~-~~g--~~i~~g~~G~~~~~i~v~G~~~Ha~~-P-~~g~nAi~~ 210 (393)
T 1vgy_A 153 KARDE------------LID--YCI---VGEPTAVD-KLG--DMIKNGRRGSLSGNLTVKGKQGHIAY-P-HLAINPVHT 210 (393)
T ss_dssp HHTTC------------CEE--EEE---ECCCCBSS-STT--SEEECEECEEEEEEEEEECBCEETTC-G-GGCBCHHHH
T ss_pred HhcCc------------CCC--EEE---EeCCCCcc-cCC--ceeEEeeeeEEEEEEEEEccCcccCC-C-ccCCCHHHH
Confidence 11111 112 111 11222110 011 12456789999999999999999997 9 699999999
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCC-CcceeCCeEEEEEEeeCCChHHHHHHHHHH
Q 015341 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPS-ASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (408)
Q Consensus 216 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~-~~NviP~~a~~~~~iR~~p~~~~~~v~~~i 294 (408)
+++++.+|+.+..... . +...+++++++.|++ |. +.|+||++|++++++|++|.++.+++.++|
T Consensus 211 ~a~~i~~l~~~~~~~~--------~------~~~~~~~~~v~~i~g-G~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i 275 (393)
T 1vgy_A 211 FAPALLELTQEVWDEG--------N------EYFPPTSFQISNING-GTGATNVIPGELNVKFNFRFSTESTEAGLKQRV 275 (393)
T ss_dssp HHHHHHHHHHCCCCCC--------C------SSCCCCEEEEEEEEE-CCSCTTEECSEEEEEEEEEECTTSCHHHHHHHH
T ss_pred HHHHHHHhhccccccc--------c------cccCCCeEEEeeEcC-CCCCCcccCCeEEEEEEEecCCCCCHHHHHHHH
Confidence 9999999987532110 0 122467999999999 65 899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEeecCCC-ccCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhh-hcCeeEE
Q 015341 295 SNQLYQICEKRSVSCIVERKHDANA-VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-LTKVGML 372 (408)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~-~~p~~~~ 372 (408)
+++++. .++++++++...++| ..+++++++.+.+++++.+|.+ .....++|++|++++.. .+|++
T Consensus 276 ~~~~~~----~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~g~~-------~~~~~~~g~~D~~~~~~~~~P~v-- 342 (393)
T 1vgy_A 276 HAILDK----HGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIE-------AELSTTGGTSDGRFIKAMAQELI-- 342 (393)
T ss_dssp HHHHHH----TTCCEEEEEEEEECCEECCSSHHHHHHHHHHHHHHSSC-------CEEECCSCCCTHHHHGGGEEEEE--
T ss_pred HHHHHH----hCCCeEEEEecCCCcccCCCcHHHHHHHHHHHHHcCCC-------ceEecCCccchHHHHHhCCCCEE--
Confidence 988763 566776665433344 4567889999999999988763 11223468999999988 47743
Q ss_pred EEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhhC
Q 015341 373 FVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 408 (408)
Q Consensus 373 ~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l~ 408 (408)
.+|+.+..+|++||+++++++.+++++|..++.+|.
T Consensus 343 ~~Gp~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 378 (393)
T 1vgy_A 343 ELGPSNATIHQINENVRLNDIPKLSAVYEGILVRLL 378 (393)
T ss_dssp ECCSBCTTTTSTTCEEETTHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCCCCCCCceeHHHHHHHHHHHHHHHHHHh
Confidence 346666679999999999999999999999998874
No 12
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=1.7e-42 Score=338.08 Aligned_cols=331 Identities=18% Similarity=0.194 Sum_probs=249.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEE---cccCcEEEEecCCCCCCCeEEEeeccccccCC--------------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~---~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~-------------------- 57 (408)
+|++|.++++||.++|+++|++++. +..+|+++++ |. ++|+|+|++||||||.+
T Consensus 18 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~ 94 (377)
T 3isz_A 18 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 94 (377)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEE-ES--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEe-CC--CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEE
Confidence 4788999999999999999999874 3457899988 54 35899999999999853
Q ss_pred --CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHH
Q 015341 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (408)
Q Consensus 58 --G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~ 135 (408)
|..|||++++++|.|++.|++.+. +++++|.|+|+++||.++ ..|++.+... +
T Consensus 95 g~G~~D~k~g~~~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~~----~~G~~~~~~~-------------------~ 149 (377)
T 3isz_A 95 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEATA----KDGTIHVVET-------------------L 149 (377)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----SSSHHHHHHH-------------------H
T ss_pred eCChhhhhHHHHHHHHHHHHHHHhCC--CCCceEEEEEEcccccCc----cccHHHHHHH-------------------H
Confidence 334999999999999999988876 789999999999999852 3599887531 1
Q ss_pred HhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHH
Q 015341 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (408)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~ 215 (408)
...+ ..+|. ++ ..+|... ...+ ..+..+.+|..+++++++|+++|+|. | +.+.||+..
T Consensus 150 ~~~~------------~~~d~--~~---~~e~~~~-~~~g--~~i~~g~~g~~~~~i~~~G~~~Ha~~-p-~~g~nai~~ 207 (377)
T 3isz_A 150 MARD------------EKITY--CM---VGEPSSA-KNLG--DVVKNGRRGSITGNLYIQGIQGHVAY-P-HLAENPIHK 207 (377)
T ss_dssp HHTT------------CCCCE--EE---ECCCCBS-SSTT--SEEEEEECEEEEEEEEEECC---------CGGGCHHHH
T ss_pred HhcC------------CCCCE--EE---EcCCCCc-ccCC--ceEEEEcceEEEEEEEEEccccccCC-C-ccCcCHHHH
Confidence 1111 11222 11 1111110 0111 12567899999999999999999998 9 699999999
Q ss_pred HHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCC-CcceeCCeEEEEEEeeCCChHHHHHHHHHH
Q 015341 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPS-ASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (408)
Q Consensus 216 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~-~~NviP~~a~~~~~iR~~p~~~~~~v~~~i 294 (408)
+++++.+|+++..... ++...+++++++.|++ |. +.|+||++|++.+|+|++|.++++++.+++
T Consensus 208 ~~~~i~~l~~~~~~~~--------------~~~~~~~~~~v~~i~g-g~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i 272 (377)
T 3isz_A 208 AALFLQELTTYQWDKG--------------NEFFPPTSLQIANIHA-GTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKV 272 (377)
T ss_dssp HHHHHHHHHHCCCCCC--------------CSSSCCCEEEEEEEEE-CCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHH
T ss_pred HHHHHHHHHhcccccc--------------ccccCCceeEEEEEEC-CCCCCcccCCceEEEEEEecCCCCCHHHHHHHH
Confidence 9999999987532110 0222478999999999 66 899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEeecCCCc-cCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhhcCeeEEE
Q 015341 295 SNQLYQICEKRSVSCIVERKHDANAV-MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLF 373 (408)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~ 373 (408)
+++++ .+++++++++....+|. .+++++++.+.+++++++|.+ .....++|++|++++...++.++.|
T Consensus 273 ~~~~~----~~g~~~~i~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~-------~~~~~~~g~tDa~~~~~~g~~~v~~ 341 (377)
T 3isz_A 273 AEMLE----KHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGIT-------PKAETGGGTSDGRFIALMGAEVVEF 341 (377)
T ss_dssp HHHHH----HTTCCEEEEEEECCCCEECCTTHHHHHHHHHHHHHHSCC-------CEEEECSSCCSHHHHHTTTCEEEEC
T ss_pred HHHHH----HcCCCeEEEEEecCCCCcCCCCHHHHHHHHHHHHHhCCC-------CeeeccCcccHHHHHHHcCCCEEEE
Confidence 88876 47888888766544554 567789999999999987753 1222346899999998776555544
Q ss_pred EecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhhC
Q 015341 374 VRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 408 (408)
Q Consensus 374 ~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l~ 408 (408)
|+.....|++||+++++++.+++++|..++.+|+
T Consensus 342 -Gp~~~~~H~~~E~i~~~~l~~~~~i~~~~i~~ll 375 (377)
T 3isz_A 342 -GPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLL 375 (377)
T ss_dssp -CSBCTTTTSTTCEEEHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCCcccCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 6656679999999999999999999999999885
No 13
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=4.1e-42 Score=337.34 Aligned_cols=319 Identities=21% Similarity=0.217 Sum_probs=253.1
Q ss_pred HHHHHHHHHHHHHHcCcEEEEcc-----cC-cEEEEecCCCCCCCeEEEeeccccccCC------------------CCC
Q 015341 5 SVRAGNLIRQWMEDAGLRTWVDH-----LG-NVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIF 60 (408)
Q Consensus 5 E~~~~~~i~~~l~~~G~~~~~~~-----~~-nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------------G~~ 60 (408)
+.++++||.++|+++||+++.+. .+ |++++++|.+ +|+|+|++||||||.. |+.
T Consensus 41 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~--~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~ 118 (393)
T 1cg2_A 41 IAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIA 118 (393)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTT
T ss_pred HHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC--CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcc
Confidence 47899999999999999987664 24 8999997653 4899999999999863 456
Q ss_pred CChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCC
Q 015341 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (408)
Q Consensus 61 D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (408)
|||++++++|.|++.|++.+. +++++|.|+|+++||.+ ..|++.++.. ...
T Consensus 119 D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~G~~~~~~~------------------~~~---- 169 (393)
T 1cg2_A 119 DDKGGNAVILHTLKLLKEYGV--RDYGTITVLFNTDEEKG-----SFGSRDLIQE------------------EAK---- 169 (393)
T ss_dssp TTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGT-----TTTTHHHHHH------------------HHH----
T ss_pred cchHHHHHHHHHHHHHHhcCC--CCCCCEEEEEEcccccC-----CccHHHHHHH------------------Hhh----
Confidence 999999999999999999986 67889999999999984 3688877521 100
Q ss_pred CcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 015341 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (408)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i 220 (408)
.++. + +..+|+.. ....++.+.+|..+++|+++|+++|||..| +.|+||+..+++++
T Consensus 170 ------------~~d~--~---i~~e~~~~-----~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p-~~g~nAi~~~~~~i 226 (393)
T 1cg2_A 170 ------------LADY--V---LSFEPTSA-----GDEKLSLGTSGIAYVQVNITGKASHAGAAP-ELGVNALVEASDLV 226 (393)
T ss_dssp ------------HCSE--E---EECCCEET-----TSCEEESEECEEEEEEEEEECBCEETTSCG-GGSBCHHHHHHHHH
T ss_pred ------------cCCE--E---EEeCCCCC-----CCCcEEEeeeeeEEEEEEEEeeecccCCCc-ccCcCHHHHHHHHH
Confidence 0221 2 12222110 012466789999999999999999998669 68999999999999
Q ss_pred HHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHH
Q 015341 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (408)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~ 300 (408)
.+|+.+.. +. ..++++++.|++ |.+.|+||++|++++++|++|.++.+++.++|+++++.
T Consensus 227 ~~l~~~~~------------------~~-~~~~~~v~~i~g-G~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~ 286 (393)
T 1cg2_A 227 LRTMNIDD------------------KA-KNLRFNWTIAKA-GNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ 286 (393)
T ss_dssp HHHGGGCB------------------TT-TTEEEEEEEEEE-CSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS
T ss_pred HHHHhhhC------------------cc-cCceEEEEEEeC-CCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc
Confidence 99876533 22 368999999999 88999999999999999999999999999999999875
Q ss_pred HHHHcCCeEEEEEeecCCCccCC---HHHHHHHHHHHHHHHhhccCCccccccccC-CccchHHHHhhhh-cCeeEEEEe
Q 015341 301 ICEKRSVSCIVERKHDANAVMCD---ADLSSQLKSASYAALKRMTGATQHEIPVIM-SGAGHDAMAMSHL-TKVGMLFVR 375 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~-~~g~tD~~~~~~~-~p~~~~~~g 375 (408)
. ...++++++++...+||+.++ +++++.++++++. +|.+ ..... ++|++|+++|... +|+++ .+|
T Consensus 287 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~-------~~~~~~~~g~tD~~~~~~~giP~~~-~~G 356 (393)
T 1cg2_A 287 K-KLPEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKE-AGGT-------LGVEERTGGGTDAAYAALSGKPVIE-SLG 356 (393)
T ss_dssp C-SSTTCEEEEEEEECSCCEECHHHHHHHHHHHHHHHHH-TTCC-------CEEESCBSCCCTHHHHGGGSCCEEC-CCS
T ss_pred c-cCCCcEEEEEeccccCCccCCcchHHHHHHHHHHHHH-hCCC-------CccccCCCcccHHHHHHhCCCCEEE-eCC
Confidence 2 346888888877788888654 6788888888764 5542 12223 4589999999887 79874 345
Q ss_pred cCCCCCCC-CCCCCChhhHHHHHHHHHHHHHhh
Q 015341 376 CRGGISHS-PAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 376 ~~~~~~H~-~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
+.....|+ |||+++++++.+++++|..++.++
T Consensus 357 ~~~~~~H~~~~E~i~~~~l~~~~~~~~~~~~~l 389 (393)
T 1cg2_A 357 LPGFGYHSDKAEYVDISAIPRRLYMAARLIMDL 389 (393)
T ss_dssp CEEECTTSSSCCEEEGGGHHHHHHHHHHHHHHH
T ss_pred CCCCCccCCCcceEEehhHHHHHHHHHHHHHHH
Confidence 54456899 999999999999999999999875
No 14
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=6.2e-43 Score=347.42 Aligned_cols=318 Identities=18% Similarity=0.122 Sum_probs=249.6
Q ss_pred CHHHHHHHHHHHHHHHHcCcE-EEEcccCcEEEEecCCCC-CCCeEEEeeccccccCC--------------C-------
Q 015341 2 SPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G------- 58 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~-~~~~~~~nvia~~~g~~~-~~~~i~l~~H~D~Vp~~--------------G------- 58 (408)
|.+|+++++||.++|+++|++ +++++.+||+++++|+.+ +.|+|+|++|+||||.. |
T Consensus 53 ~~~e~~~~~~l~~~l~~~G~~~~~~d~~~nv~a~~~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~ 132 (434)
T 3ife_A 53 TPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNE 132 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEECTTSCEEEEECCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEET
T ss_pred CHHHHHHHHHHHHHHHHcCCceEEECCCcEEEEEeCCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceeccc
Confidence 458999999999999999997 888888999999988653 46899999999999851 1
Q ss_pred -------------------------------CCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCc
Q 015341 59 -------------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (408)
Q Consensus 59 -------------------------------~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~ 107 (408)
+.|||++++++|.|+++|++++. .++++|.|+|+++||.+ .
T Consensus 133 ~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~--~~~~~i~~if~~~EE~g------~ 204 (434)
T 3ife_A 133 ELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQ--IKHGKIRVAFTPDEEIG------R 204 (434)
T ss_dssp TTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTT--SCBCCEEEEEESCGGGT------C
T ss_pred ccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHhCCC--CCCCCEEEEEECCcccC------h
Confidence 37999999999999999999975 78999999999999984 4
Q ss_pred chHHHhccCCccccccccCCCCcHHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeec
Q 015341 108 GSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 187 (408)
Q Consensus 108 Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 187 (408)
|++.+.. +. +.++..+. .| ++ .. ..++.+.+|.
T Consensus 205 Ga~~~~~------------------~~-----------------~~~d~~~~---~d--~~----~~---g~i~~~~~G~ 237 (434)
T 3ife_A 205 GPAHFDV------------------EA-----------------FGASFAYM---MD--GG----PL---GGLEYESFNA 237 (434)
T ss_dssp TGGGCCH------------------HH-----------------HCCSEEEE---CC--CC----ST---TEEECCBCEE
T ss_pred HHHHhhh------------------hh-----------------cCCCEEEE---ec--CC----CC---CceeecCCCe
Confidence 7776420 01 11222221 22 21 11 2466789999
Q ss_pred eeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcc
Q 015341 188 TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASN 267 (408)
Q Consensus 188 ~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~N 267 (408)
.+++|+++|+++|||..| +.|+||+..+++++..|+++.. |. .++.+++.+++ + ..|
T Consensus 238 ~~~~i~v~G~~~Hag~~P-~~g~nAi~~aa~~i~~l~~~~~------------------~~--~~~~~~g~i~~-g-~~n 294 (434)
T 3ife_A 238 AGAKLTFNGTNTHPGTAK-NKMRNATKLAMEFNGHLPVEEA------------------PE--YTEGYEGFYHL-L-SLN 294 (434)
T ss_dssp EEEEEEEECBCCCGGGCT-TTCBCHHHHHHHHHHTSCTTCS------------------GG--GCCTTCCEEEE-E-EEE
T ss_pred EEEEEEEEEEecCCCCCc-ccchhHHHHHHHHHHhcccccC------------------CC--cceeeeEEEEe-e-eEe
Confidence 999999999999998559 6999999999999998775411 11 22233344555 3 478
Q ss_pred eeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcC-CeEEEEEeecCCC----ccCCHHHHHHHHHHHHHHHhhcc
Q 015341 268 VIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS-VSCIVERKHDANA----VMCDADLSSQLKSASYAALKRMT 342 (408)
Q Consensus 268 viP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~g~~~ 342 (408)
+||++|++++++|++|.++.+++.++|+++++..+..++ +++++++...+++ +.+++++++.+++++++ +|.+
T Consensus 295 ~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~- 372 (434)
T 3ife_A 295 GDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQMQEKYGQDAVVLEMNDQYYNMLEKIEPVREIVDIAYEAMKS-LNIE- 372 (434)
T ss_dssp ECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHCGGGEEEEEEEEECCTHHHHGGGTHHHHHHHHHHHH-TTCC-
T ss_pred EecCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeecccchhccccCCHHHHHHHHHHHHH-hCCC-
Confidence 999999999999999999999999999999999888888 6666666555554 45788899999999887 6652
Q ss_pred CCccccccccCCccchHHHHhhhh-cCeeEEEEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 343 GATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 343 ~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
.....++|++|+++|... +|++++ |++....|+|||+++++++.+++++|..++.++
T Consensus 373 ------~~~~~~~ggtD~~~~~~~GiP~~~~--g~g~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 430 (434)
T 3ife_A 373 ------PNIHPIRGGTDGSQLSYMGLPTPNI--FTGGENYHGKFEYVSVDVMEKAVQVIIEIARRF 430 (434)
T ss_dssp ------CEECCBSSCCHHHHHHHTTCCCCEE--CCSEESTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred ------CEEeecccCchHHHHhhCCCcEEEe--CCCCCCCcCCceeecHHHHHHHHHHHHHHHHHH
Confidence 122234689999999888 898753 454457999999999999999999999998765
No 15
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.1e-42 Score=334.65 Aligned_cols=322 Identities=18% Similarity=0.190 Sum_probs=243.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCcE-EEEccc-CcEEEEecCCCCCCCeEEEeeccccccCC---------------CCCCCh
Q 015341 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHL-GNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGS 63 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~-~~~~~~-~nvia~~~g~~~~~~~i~l~~H~D~Vp~~---------------G~~D~k 63 (408)
+|++|.++++||.++|+++||+ ++.+.. +|++++++++ ++|+|+|++||||||.+ |..|||
T Consensus 28 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~--~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K 105 (369)
T 3tx8_A 28 PSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRG--LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMK 105 (369)
T ss_dssp BTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCC--CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTH
T ss_pred CCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCC--CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccch
Confidence 4788999999999999999873 444333 4799998765 35899999999999962 455999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCCCcc
Q 015341 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (408)
Q Consensus 64 ~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 143 (408)
++++++|.|+++|++.+ +++++|.|+|+++||.++ ...|++.+++... .
T Consensus 106 ~~~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g~---~~~G~~~~~~~~~----~--------------------- 154 (369)
T 3tx8_A 106 SGLAVYLHTFATLATST---ELKHDLTLIAYECEEVAD---HLNGLGHIRDEHP----E--------------------- 154 (369)
T ss_dssp HHHHHHHHHHHHHTSCT---TCCSEEEEEEECCCSSCT---TSCHHHHHHHHCG----G---------------------
T ss_pred HHHHHHHHHHHHHHhhc---CCCccEEEEEEeccccCc---ccccHHHHHHhcc----c---------------------
Confidence 99999999999998754 689999999999999852 1147777652110 0
Q ss_pred hhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 015341 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l 223 (408)
.+.++ ++ ++.+|+ . ..++.+.+|..+++|+++|+++|+|. | +.|.||+..+++++..|
T Consensus 155 -------~~~~~--~~---i~~ep~------~--~~i~~~~~G~~~~~i~v~G~~~Ha~~-p-~~g~nAi~~~a~~i~~l 212 (369)
T 3tx8_A 155 -------WLAAD--LA---LLGEPT------G--GWIEAGCQGNLRIKVTAHGVRAHSAR-S-WLGDNAMHKLSPIISKV 212 (369)
T ss_dssp -------GGCCS--EE---EECCCC------T--TCEEESBCEEEEEEEEEECBCCBTTS-G-GGSBCTGGGGHHHHHHH
T ss_pred -------ccCCC--EE---EEeCCC------C--CceeeecceEEEEEEEEeeeccccCC-C-CcCcCHHHHHHHHHHHH
Confidence 01122 23 355432 1 24677899999999999999999997 9 69999999999999999
Q ss_pred HHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHH
Q 015341 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303 (408)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~ 303 (408)
+++..+..+ .++...+++++++.|++ |.+.|+||++|++++++|++|.++.+++.++|+++++..+
T Consensus 213 ~~~~~~~~~------------~~~~~~~~~~~vg~i~g-G~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~- 278 (369)
T 3tx8_A 213 AAYKAAEVN------------IDGLTYREGLNIVFCES-GVANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG- 278 (369)
T ss_dssp HHCCCCEEE------------ETTEEEECEEEEEEEEE-CSBTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-
T ss_pred Hhhcccccc------------cCCcccCceEEEEEEEC-CCCCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-
Confidence 876542110 00111257899999999 8999999999999999999999999999999999998765
Q ss_pred HcCCeEEEE-EeecCCCccCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhh-cCeeEEEEecCC-CC
Q 015341 304 KRSVSCIVE-RKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRG-GI 380 (408)
Q Consensus 304 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~g~~~-~~ 380 (408)
.+++++++. ....+++.. +.++++.+.++ +|.. .+. .++|++|+++|.+. +|++. +|++. +.
T Consensus 279 ~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~g~~------~~~--~~~ggtD~~~~~~~giP~~~--~Gpg~~~~ 343 (369)
T 3tx8_A 279 QDGIEWAVEDGAGGALPGL-GQQVTSGLIDA----VGRE------KIR--AKFGWTDVSRFSAMGIPALN--FGAGDPSF 343 (369)
T ss_dssp STTEEEEEEEEECCBCCCT-TSHHHHHHHHH----HCGG------GEE--ECCSCCTHHHHHTTTCCEEE--ECSSCSSS
T ss_pred cCCeEEEEEecCCCCCCCC-CCHHHHHHHHH----cCCC------CCc--ccccccchHHHhhCCCCEEE--ECCCChhh
Confidence 567777764 223334333 44555554443 3431 112 23578999999887 88763 46654 68
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHh
Q 015341 381 SHSPAEHVLDDDVWAAGLAVLAFLET 406 (408)
Q Consensus 381 ~H~~~E~i~i~~~~~~~~~~~~~l~~ 406 (408)
+|+|||+++++++.+++++|..+|.+
T Consensus 344 ~H~~~E~v~~~~l~~~~~~l~~~l~e 369 (369)
T 3tx8_A 344 AHKRDEQCPVEQITDVAAILKQYLSE 369 (369)
T ss_dssp SSCTTCEEEHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcEEEHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999864
No 16
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=332.02 Aligned_cols=346 Identities=14% Similarity=0.119 Sum_probs=251.3
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEccc-------C-------cEEEEecCCCCCCCeEEEeeccccccCC------------
Q 015341 4 ASVRAGNLIRQWMEDAGLRTWVDHL-------G-------NVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (408)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~~~~~~~-------~-------nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------ 57 (408)
+|.++++||.++|+++||+++.... + ||++.+++. +++|+|+|++||||||.+
T Consensus 51 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 129 (485)
T 3dlj_A 51 ELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSD-PTKGTVCFYGHLDVQPADRGDGWLTDPYVL 129 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCC-CCCCEEEEEeeecCCCCCCcccCCCCCCcc
Confidence 3789999999999999999876542 2 599998543 346899999999999852
Q ss_pred ----------CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCC
Q 015341 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (408)
Q Consensus 58 ----------G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~ 127 (408)
|..|||++++++|.|+++|++.+. +++++|+|+|+++||.+ ..|++.+++....
T Consensus 130 ~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~g~~~~~~~~~~--------- 193 (485)
T 3dlj_A 130 TEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQ--DLPVNIKFIIEGMEEAG-----SVALEELVEKEKD--------- 193 (485)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGT-----TTTHHHHHHHHTT---------
T ss_pred EEECCEEEecccccCcHHHHHHHHHHHHHHHhCC--CCCccEEEEEEcccccC-----CccHHHHHHhhhh---------
Confidence 456999999999999999999986 78999999999999984 3688877521000
Q ss_pred CCcHHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCC--CCCCCC
Q 015341 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQG--HAGTVP 205 (408)
Q Consensus 128 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~--Hs~~~p 205 (408)
++. -++|.+ +..| +. ......+.++.+.+|..+++|+++|+++ |||..+
T Consensus 194 -----------~~~----------~~~d~~---~~~~--~~---~~~~~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~~g 244 (485)
T 3dlj_A 194 -----------RFF----------SGVDYI---VISD--NL---WISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFG 244 (485)
T ss_dssp -----------TTS----------TTCCEE---EECC--CB---CCC--CCEEEEEECEEEEEEEEEESCSSCEETTTST
T ss_pred -----------hcc----------cCCCEE---EEcC--CC---ccCCCCeeEEEeccceEEEEEEEEECCCCCcCCCCC
Confidence 000 012221 1123 11 0001123567789999999999999999 998634
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCC-ccc-cCCCCCCcc--------cccCC--------------------------
Q 015341 206 MSMRQDPMTAAAELIVLLERLCKHPKD-FLS-YDGRSNCST--------LESLS-------------------------- 249 (408)
Q Consensus 206 ~~~g~nai~~~~~~i~~l~~~~~~~~~-~~~-~~~~~~~~~--------~~~~~-------------------------- 249 (408)
.||+..++.++..|+.+..+.-. .++ +.+..++.. .-|+.
T Consensus 245 ----~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 320 (485)
T 3dlj_A 245 ----GILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLW 320 (485)
T ss_dssp ----TSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHH
T ss_pred ----ccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHh
Confidence 45555555555555544332100 000 001111100 00000
Q ss_pred CCeEEEEEEEEecC----CCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEEeecCCCccCC
Q 015341 250 SSLVCTVGEISSWP----SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS--VSCIVERKHDANAVMCD 323 (408)
Q Consensus 250 ~~~t~~v~~i~g~g----~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 323 (408)
..++++++.|++ | ++.|+||++|++++++|+++.++.+++.++|+++++..+..++ +++++++...+||+.++
T Consensus 321 ~~~~~~v~~i~g-G~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~~~~~pp~~~~ 399 (485)
T 3dlj_A 321 RYPSLSIHGIEG-AFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIAN 399 (485)
T ss_dssp TSCEEEEEEEES-SCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEEEEEECCEECC
T ss_pred cCCceEEEEEec-CCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEEcCCCCceeCC
Confidence 168899999998 7 8999999999999999999999999999999999999988888 58888887788888654
Q ss_pred --HHHHHHHHHHHHHHHhhccCCccccccccCCccchHH-HHhhhhcCeeEEEEecCC--CCCCCCCCCCChhhHHHHHH
Q 015341 324 --ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA-MAMSHLTKVGMLFVRCRG--GISHSPAEHVLDDDVWAAGL 398 (408)
Q Consensus 324 --~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~-~~~~~~~p~~~~~~g~~~--~~~H~~~E~i~i~~~~~~~~ 398 (408)
.++++.+.+++++++|.++ ... .++|++|+ .+|.+..|..++++|+++ +..|+|||+++++++..+++
T Consensus 400 ~d~~~~~~~~~a~~~~~G~~~-----~~~--~~ggs~Dfa~~~~~~~p~~~i~~g~g~~~~~~H~p~E~i~~~~l~~g~~ 472 (485)
T 3dlj_A 400 IDDTQYLAAKRAIRTVFGTEP-----DMI--RDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTK 472 (485)
T ss_dssp TTSHHHHHHHHHHHHHHSSCC-----EEE--EESSCCHHHHHHHHHTC--CEECCCBCTTCCTTSTTCEEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCc-----eec--CCCCchhHHHHHHHHhCCCEEEecCCCCCCCCcCCCCCccHHHHHHHHH
Confidence 4899999999999887631 112 24578897 577777787777778764 57999999999999999999
Q ss_pred HHHHHHHhh
Q 015341 399 AVLAFLETH 407 (408)
Q Consensus 399 ~~~~~l~~l 407 (408)
++..++.+|
T Consensus 473 ~l~~~l~~l 481 (485)
T 3dlj_A 473 LFAAFFLEM 481 (485)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 17
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=5.3e-41 Score=326.02 Aligned_cols=305 Identities=16% Similarity=0.164 Sum_probs=239.9
Q ss_pred HHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCC-CCCCCeEEEeeccccccC----------C------CCCCChHH
Q 015341 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGL-NASAQALLIGSHLDTVVD----------A------GIFDGSLG 65 (408)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~-~~~~~~i~l~~H~D~Vp~----------~------G~~D~k~~ 65 (408)
++|.++++||.++|+++|++++.+. +|+++.++|. ++++|+|+|++||||||. + |..|||++
T Consensus 26 ~~e~~~~~~l~~~l~~~G~~~~~~~-~~~~~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~ 104 (364)
T 2rb7_A 26 EQISRCAGFIMDWCAQNGIHAERMD-HDGIPSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYA 104 (364)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEE-ETTEEEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHH
T ss_pred chHHHHHHHHHHHHHHcCCeEEEec-CCCceEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHH
Confidence 7899999999999999999887654 7888888752 224589999999999985 2 34599999
Q ss_pred HHHHHHHHHHHHhcCCCCCC---CCC--EEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCC
Q 015341 66 IITAISALKVLKSTGKLGKL---KRP--VEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (408)
Q Consensus 66 ia~~l~a~~~l~~~~~~~~~---~~~--i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (408)
++++|.|++.|++.+. ++ +++ |.|+|+++||.+ ++.|++.+++..
T Consensus 105 ~a~~l~a~~~l~~~~~--~~~~~~g~~~v~~~~~~~EE~~----g~~G~~~~~~~~------------------------ 154 (364)
T 2rb7_A 105 VALGLVMFRDRLNALK--AAGRSQKDMALGLLITGDEEIG----GMNGAAKALPLI------------------------ 154 (364)
T ss_dssp HHHHHHHHHHHHHHHH--HTTCCGGGCCEEEEEESCGGGT----STTTHHHHGGGC------------------------
T ss_pred HHHHHHHHHHHHHhCC--CCcccCCCccEEEEEEeccccC----chhhHHHHHhcC------------------------
Confidence 9999999999998865 56 568 999999999974 346888775311
Q ss_pred CcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 015341 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (408)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i 220 (408)
+++ ++ +|++++.+ .+++.+.+|..+++|+++|+++|+|. | +.|+||+..+++++
T Consensus 155 ------------~~d--~~---i~~d~~~p-------~~i~~~~~G~~~~~i~v~G~~~Ha~~-P-~~g~nAi~~~~~~i 208 (364)
T 2rb7_A 155 ------------RAD--YV---VALDGGNP-------QQVITKEKGIIDIKLTCTGKAAHGAR-P-WMGVNAVDLLMEDY 208 (364)
T ss_dssp ------------EEE--EE---EECSSSBT-------TEEEEEECEEEEEEEEEECBCEETTS-G-GGSBCHHHHHHHHH
T ss_pred ------------CCC--EE---EEccCCcc-------cceEEEeeeEEEEEEEEEeecccCCC-C-CCCcCHHHHHHHHH
Confidence 011 22 46543322 23677899999999999999999998 9 69999999999999
Q ss_pred HHHHHHHcCCCCccccCCCCCCcccccCC--CCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHH
Q 015341 221 VLLERLCKHPKDFLSYDGRSNCSTLESLS--SSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQL 298 (408)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~ 298 (408)
.+|+.+.. ++.. ++++++++.|++ |.+.|+||++|++++++|++|.++.+++.++|++++
T Consensus 209 ~~l~~~~~-----------------~~~~~~~~~~~~vg~i~g-G~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~ 270 (364)
T 2rb7_A 209 TRLKTLFA-----------------EENEDHWHRTVNLGRIRA-GESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTV 270 (364)
T ss_dssp HHHHTTSC-----------------CCCTTCCSCEEEEEEEEE-CSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHC
T ss_pred HHHHhhcc-----------------chhhcCCCceEEEEEEec-CCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHh
Confidence 99886521 0222 478999999999 899999999999999999999999999999999887
Q ss_pred HHHHHHcCCeEEEEEeecCCCcc--CCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhh-hcCeeEEEEe
Q 015341 299 YQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH-LTKVGMLFVR 375 (408)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~g 375 (408)
+. +++ ...++|+. .+.++++.+.++++ .+|. + ++|++|+++|.. .+|++. +|
T Consensus 271 ~~-------~v~---~~~~~~~~~~~~~~l~~~~~~~~~-~~g~---------~---~~g~~D~~~~~~~~~p~v~--~G 325 (364)
T 2rb7_A 271 SG-------TVS---IVRTVPVFLAADSPYTERLLALSG-ATAG---------K---AHGASDARYLGENGLTGVV--WG 325 (364)
T ss_dssp SS-------EEE---EEEEECCEECCCCHHHHHHHHHHC-CEEE---------E---ESSCCGGGGTGGGTCCEEE--CC
T ss_pred hh-------hEE---eccCCccccCCCCHHHHHHHHHHH-hcCC---------C---CCCCchHHHHHhcCCCEEE--EC
Confidence 53 444 23345543 35678888877765 3321 1 247899999988 478764 46
Q ss_pred cCCC-CCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 376 CRGG-ISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 376 ~~~~-~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
+++. ..|++||+++++++.+++++|..++.++
T Consensus 326 p~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~ 358 (364)
T 2rb7_A 326 AEGFNTLHSRDECLHIPSLQSIYDPLMQLAREM 358 (364)
T ss_dssp CCCTTCTTSTTCEEETTHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 6554 4599999999999999999999999876
No 18
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=4.7e-40 Score=330.95 Aligned_cols=346 Identities=16% Similarity=0.093 Sum_probs=255.8
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEccc--------------CcEEEEecCCCCCCCeEEEeeccccccCC------------
Q 015341 4 ASVRAGNLIRQWMEDAGLRTWVDHL--------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (408)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~~~~~~~--------------~nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------ 57 (408)
+|.++++||.++|+++|++++.+.. +||++++++. +++|+|+|++||||||.+
T Consensus 44 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 122 (479)
T 2zog_A 44 EIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSD-PQKKTVCIYGHLDVQPAALEDGWDSEPFTL 122 (479)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCC-CCCCeEEEEEecCCCCCCccccCcCCCCcc
Confidence 5689999999999999999877653 7899999653 346899999999999862
Q ss_pred ----------CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCC
Q 015341 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (408)
Q Consensus 58 ----------G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~ 127 (408)
|++|||++++++|.|++.|++.+. +++++|.|+|+++||.+ ..|++.+++....
T Consensus 123 ~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~~~~--------- 186 (479)
T 2zog_A 123 VEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ--EIPVNLRFCLEGMEESG-----SEGLDELIFAQKD--------- 186 (479)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGT-----CTTHHHHHHHTTT---------
T ss_pred eeECCEEEeeccccChHHHHHHHHHHHHHHHhCC--CCCCcEEEEEecccccC-----CccHHHHHHhhhh---------
Confidence 458999999999999999999986 78999999999999984 3689887632110
Q ss_pred CCcHHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecC--CCCCCCC
Q 015341 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTVP 205 (408)
Q Consensus 128 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~--~Hs~~~p 205 (408)
++. .++| ++ +..+++.. +. ....++.+.+|..+++|+++|++ +|||. |
T Consensus 187 -----------~~~----------~~~d--~~---i~~e~~~~-~~--~~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~-~ 236 (479)
T 2zog_A 187 -----------KFF----------KDVD--YV---CISDNYWL-GK--NKPCITYGLRGICYFFIEVECSDKDLHSGV-Y 236 (479)
T ss_dssp -----------TTT----------TTCC--EE---EECCCBCS-SS--SSCEEEEEECEEEEEEEEEECCSSCEEHHH-H
T ss_pred -----------hhc----------ccCC--EE---EEeCCCcC-CC--CCeEEEEecceEEEEEEEEEeCCCCCccCC-C
Confidence 000 0112 11 12222211 01 12457789999999999999999 99987 4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCC-ccc-cCCCCCCc-----------cccc------------C-------C----
Q 015341 206 MSMRQDPMTAAAELIVLLERLCKHPKD-FLS-YDGRSNCS-----------TLES------------L-------S---- 249 (408)
Q Consensus 206 ~~~g~nai~~~~~~i~~l~~~~~~~~~-~~~-~~~~~~~~-----------~~~~------------~-------~---- 249 (408)
|.||+..+++++..|+.+..+... ..+ +.....+. ..++ . .
T Consensus 237 ---g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 313 (479)
T 2zog_A 237 ---GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRW 313 (479)
T ss_dssp ---TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHH
T ss_pred ---CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhh
Confidence 589999999999888765432100 000 00000000 0000 0 0
Q ss_pred CCeEEEEEEEEecC----CCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHc--CCeEEEEEeecCCCcc--
Q 015341 250 SSLVCTVGEISSWP----SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR--SVSCIVERKHDANAVM-- 321 (408)
Q Consensus 250 ~~~t~~v~~i~g~g----~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~-- 321 (408)
..++++++.|++ | .+.|+||++|++++++|++|.++.+++.++|+++++.++..+ ++.+++++...+||+.
T Consensus 314 ~~~~~~v~~i~g-g~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 392 (479)
T 2zog_A 314 RYPSLSLHGIEG-AFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSD 392 (479)
T ss_dssp TSCEEEEEEEES-SCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEECCEECC
T ss_pred cCCCeEEeeeec-CCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEecCCCCceecC
Confidence 157899999998 6 799999999999999999999999999999999999887655 5677777766778764
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHH-HHhhhh--cCeeEEEEecCCCCCCCCCCCCChhhHHHHHH
Q 015341 322 CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA-MAMSHL--TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGL 398 (408)
Q Consensus 322 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~-~~~~~~--~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~~ 398 (408)
.++++++.+.+++++.+|.++ ... .++|++|+ ++|... +|.+++.+|+.....|+|||+++++++.++++
T Consensus 393 ~d~~~~~~~~~a~~~~~g~~~-----~~~--~~~gs~d~~~~~~~~~~~p~~~~g~g~~~~~~H~~~E~i~~~~l~~~~~ 465 (479)
T 2zog_A 393 FNHPHYQAGRRALKTVFGVEP-----DLT--REGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTK 465 (479)
T ss_dssp TTSHHHHHHHHHHHHHHSSCC-----EEE--EESSCCTHHHHHHHHHCSEEEECCCBCTTCCTTSTTCEEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCc-----eec--CCCCccchHHHHHHHhCCCEEEecCCCCccCCCCCCCcEeHHHHHHHHH
Confidence 467899999999999887631 112 23588998 577664 67765434555457999999999999999999
Q ss_pred HHHHHHHhh
Q 015341 399 AVLAFLETH 407 (408)
Q Consensus 399 ~~~~~l~~l 407 (408)
+|..++.++
T Consensus 466 ~~~~~~~~~ 474 (479)
T 2zog_A 466 MLAAYLYEV 474 (479)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 19
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=6.2e-40 Score=317.54 Aligned_cols=307 Identities=18% Similarity=0.175 Sum_probs=239.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccCC--------------------CCC
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIF 60 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~--------------------G~~ 60 (408)
+|++|.++++||.++|+++|++++.+ .+|++++++|+++++|+|+|.+||||||.+ |..
T Consensus 26 ~s~~e~~~~~~l~~~l~~~g~~~~~~-~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~ 104 (356)
T 3ct9_A 26 ISREETQAADFLQNYIEAEGMQTGRK-GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSN 104 (356)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCCEEEE-TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTT
T ss_pred CCCChHHHHHHHHHHHHHCCCeEEEE-eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcc
Confidence 47789999999999999999998776 689999998733236899999999999863 234
Q ss_pred CChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCC
Q 015341 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (408)
Q Consensus 61 D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (408)
|||++++++|.|++.|++.+ ++++|.|+|+++||.+ ++.|++.+++...
T Consensus 105 D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~~----g~~G~~~~~~~~~----------------------- 153 (356)
T 3ct9_A 105 DAGASVVSLLQVFLQLCRTS----QNYNLIYLASCEEEVS----GKEGIESVLPGLP----------------------- 153 (356)
T ss_dssp TTHHHHHHHHHHHHHHTTSC----CSSEEEEEEECCGGGT----CTTTHHHHGGGSC-----------------------
T ss_pred cchHHHHHHHHHHHHHHhcC----CCCCEEEEEEeCcccC----CccCHHHHHhhCC-----------------------
Confidence 99999999999999999874 6899999999999972 2469998763210
Q ss_pred CcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 015341 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (408)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i 220 (408)
.+| ++ ++.+|+ . ..++.+.+|..+++|+++|+++|+|. | .|+||+..+++++
T Consensus 154 ------------~~d--~~---i~~ep~------~--~~i~~~~~G~~~~~i~~~G~~~Ha~~-p--~g~nAi~~~~~~i 205 (356)
T 3ct9_A 154 ------------PVS--FA---IVGEPT------E--MQPAIAEKGLMVLDVTATGKAGHAAR-D--EGDNAIYKVLNDI 205 (356)
T ss_dssp ------------CCS--EE---EECCSB------T--TCCEEEECCCEEEEEEEECBCCBTTS-S--CCBCTTGGGHHHH
T ss_pred ------------CCC--EE---EEcCCC------C--ceEEEeeeEEEEEEEEEECCCcccCC-C--CCCCHHHHHHHHH
Confidence 122 22 344432 1 13556799999999999999999998 7 6899999999999
Q ss_pred HHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHH
Q 015341 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (408)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~ 300 (408)
.+|+.+..+.. +|..++++++++.|++ |.+.|+||++|++++++|++|.++.+++.++|+++++.
T Consensus 206 ~~l~~~~~~~~--------------~~~~~~~~~~vg~i~g-G~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~ 270 (356)
T 3ct9_A 206 AWFRDYRFEKE--------------SPLLGPVKMSVTVINA-GTQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC 270 (356)
T ss_dssp HHHHHCCCSCC--------------BTTTBSCEEEEEEEEE-CSSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS
T ss_pred HHHHhhhcccc--------------cccCCCCcEEeeEEec-CCcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC
Confidence 99987644211 1333578999999999 89999999999999999999999999999999888753
Q ss_pred HHHHcCCeEEEEEeecCCCcc--CCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhhcCeeEEEEecCC
Q 015341 301 ICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRG 378 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~~~ 378 (408)
++++++ ..+||+. +++++++.+.+++++ .. .+++++|++.+ .+|++ ++|++.
T Consensus 271 -------~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~------------~~--~~~g~tD~~~~--~~p~v--~~G~g~ 324 (356)
T 3ct9_A 271 -------DAKARS-FRLNSSRIDEKHPFVQKAVKMGRI------------PF--GSPTLSDQALM--SFASV--KIGPGR 324 (356)
T ss_dssp -------EEEESC-SCSCCEECCTTSHHHHHHHHTTCC------------CE--EECSCCGGGGC--CSCEE--ECCSSB
T ss_pred -------eEEEee-ccCCCCCCCCCCHHHHHHHHHhcC------------Cc--ccccccchhhc--CCCEE--EECCCc
Confidence 444432 5567654 566777776654321 11 13488999832 46875 346654
Q ss_pred -CCCCCCCCCCChhhHHHHHHHHHHHHHhhC
Q 015341 379 -GISHSPAEHVLDDDVWAAGLAVLAFLETHV 408 (408)
Q Consensus 379 -~~~H~~~E~i~i~~~~~~~~~~~~~l~~l~ 408 (408)
...|++||+++++++.+++++|..++.+++
T Consensus 325 ~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 355 (356)
T 3ct9_A 325 SSRSHTAEEYIMLKEIEEAIGIYLDLLDGLK 355 (356)
T ss_dssp GGGTTSTTCEEEHHHHHHHHHHHHHHHTTCC
T ss_pred cccCcCCCcEEEHHHHHHHHHHHHHHHHHhh
Confidence 568999999999999999999999998764
No 20
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=2e-39 Score=326.31 Aligned_cols=338 Identities=14% Similarity=0.064 Sum_probs=246.7
Q ss_pred HHHHHHHHHHHHHHcCcEEEEcc---cCcEEEEecCCCCCCCeEEEeeccccccCC----------------------CC
Q 015341 5 SVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GI 59 (408)
Q Consensus 5 E~~~~~~i~~~l~~~G~~~~~~~---~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~----------------------G~ 59 (408)
|.++++||.++|+++|++++.+. .+||+++++|+++++|+|+|++||||||.+ |+
T Consensus 66 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~ 145 (481)
T 2pok_A 66 LKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGV 145 (481)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTT
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEcccc
Confidence 49999999999999999987764 368999998653346899999999999853 45
Q ss_pred CCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCC
Q 015341 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (408)
Q Consensus 60 ~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 139 (408)
.|||++++++|.|+++|++.+. +++++|.|+|+++||.+ ..|++.++.. ...
T Consensus 146 ~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~g~~~~~~~------------------~~~--- 197 (481)
T 2pok_A 146 DDDKGHITARLSALRKYMQHHD--DLPVNISFIMEGAEESA-----STDLDKYLEK------------------HAD--- 197 (481)
T ss_dssp TTTHHHHHHHHHHHHHHHHTCS--SCSSEEEEEEESCGGGT-----TTTHHHHHHH------------------HHH---
T ss_pred ccCcHHHHHHHHHHHHHHHhcC--CCCCCEEEEEecccccC-----chhHHHHHHH------------------hHh---
Confidence 7999999999999999999853 78999999999999984 3678766420 000
Q ss_pred CCcchhhhhhccCC-CCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecC--CCCCCCCCCCCCCHHHHH
Q 015341 140 IDIAEESLLQLKYD-PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTVPMSMRQDPMTAA 216 (408)
Q Consensus 140 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~--~Hs~~~p~~~g~nai~~~ 216 (408)
.+. ++ ++ +..+++.. .+....++.+.+|..+++|+++|++ +||+. | +.+.||+..+
T Consensus 198 -----------~~~~~d--~~---i~~~~~~~---~~~~~~i~~~~~G~~~~~i~v~G~~g~~Hss~-p-~~g~nAi~~~ 256 (481)
T 2pok_A 198 -----------KLRGAD--LL---VWEQGTKN---ALEQLEISGGNKGIVTFDAKVKSADVDIHSSY-G-GVVESAPWYL 256 (481)
T ss_dssp -----------HHTTCS--EE---ECSCCBBC---TTSCEEEECCBCEEEEEEEEEECSSSCEEGGG-T-TTBCCHHHHH
T ss_pred -----------hccCCC--EE---EECCCCcc---CCCCeeEEEecceeEEEEEEEecCCCCccccC-C-CCCCCHHHHH
Confidence 001 22 11 11222111 0011356678999999999999999 89976 9 6899999999
Q ss_pred HHHHHHHHHHHcCCCCccccCCCC--------------------------------CCc----ccccC---CCCeEEEEE
Q 015341 217 AELIVLLERLCKHPKDFLSYDGRS--------------------------------NCS----TLESL---SSSLVCTVG 257 (408)
Q Consensus 217 ~~~i~~l~~~~~~~~~~~~~~~~~--------------------------------~~~----~~~~~---~~~~t~~v~ 257 (408)
++++.+|++...+ +.+.... ++. ..++. ...+++|++
T Consensus 257 a~~i~~l~~~~~~----i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg 332 (481)
T 2pok_A 257 LQALQSLRAADGR----ILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIE 332 (481)
T ss_dssp HHHHHHTBCTTSC----BCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEE
T ss_pred HHHHHHhhCCCCc----eeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEE
Confidence 9999987654210 0000000 000 00000 025799999
Q ss_pred EEEecCC----CcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCcc--CCHHHHHHHH
Q 015341 258 EISSWPS----ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQLK 331 (408)
Q Consensus 258 ~i~g~g~----~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 331 (408)
.|++ |. +.|+||++|++++++|++|.++.+++.++|+++++..+. .++++++. ..+||+. .++++++.+.
T Consensus 333 ~i~g-G~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~--~~~p~~~~~~d~~l~~~~~ 408 (481)
T 2pok_A 333 GIQS-GYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYT--LGEMSYRSDMSAPAILNVI 408 (481)
T ss_dssp EEEE-ECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEE--EEECCBCCCSCSHHHHHHH
T ss_pred eeec-CCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEc--cCCCcccCCCCCHHHHHHH
Confidence 9998 54 789999999999999999999999999999999986543 45555543 4566664 4788999999
Q ss_pred HHHHHHHhhccCCccccccccCCccchHHHHhhhh--cCeeEEEEecCC--CCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 332 SASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVGMLFVRCRG--GISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 332 ~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~g~~~--~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
+++++++|.++ . ... ..+|++|+++|... +|++. +|++. ..+|++||+++++++.+++++|..++.++
T Consensus 409 ~a~~~~~g~~~----~-~~~-~~gg~~D~~~~~~~~g~p~v~--~G~g~~~~~~H~~~E~i~i~~l~~~~~~~~~~l~~l 480 (481)
T 2pok_A 409 ELAKKFYPQGV----S-VLP-TTAGTGPMHTVFDALEVPMVA--FGLGNANSRDHGGDENVRIADYYTHIELVEELIRSY 480 (481)
T ss_dssp HHHTTTCTTCE----E-EES-CBSSCCTHHHHHHHHCCCEEB--CCSBCTTCCTTSTTCEEEHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCc----c-ccc-cCCCCCchHHHHHHcCCCEEE--ecCCCcccCCCCCCCcEEHHHHHHHHHHHHHHHHhc
Confidence 99888777531 0 122 23455599988765 67643 35553 57999999999999999999999999875
No 21
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.7e-39 Score=323.42 Aligned_cols=339 Identities=16% Similarity=0.108 Sum_probs=248.4
Q ss_pred HHHHHHHHHHHHHHHcCcE---EEEcc----cCcEEEEecCCCCCCCeEEEeeccccccCC-------------------
Q 015341 4 ASVRAGNLIRQWMEDAGLR---TWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (408)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~---~~~~~----~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------------- 57 (408)
+|.++++|+.++|+++||+ ++..+ .+||+|+++|. ++|+|+|++||||||..
T Consensus 46 ~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g~--~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~ 123 (472)
T 3pfe_A 46 YMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPGQ--IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLL 123 (472)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECCS--EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEE
T ss_pred hHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcCC--CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEE
Confidence 4899999999999999984 54332 24899999873 46899999999999851
Q ss_pred ---CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHH
Q 015341 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (408)
Q Consensus 58 ---G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (408)
|..|||++++++|.|+++|++++. +++ +|+|+|+++||.+ ..|++.++.. .
T Consensus 124 ~grG~~D~K~~~a~~l~a~~~l~~~~~--~~~-~v~~~~~~~EE~g-----~~g~~~~~~~------------------~ 177 (472)
T 3pfe_A 124 YGRGGADDGYSAYASLTAIRALEQQGL--PYP-RCILIIEACEESG-----SYDLPFYIEL------------------L 177 (472)
T ss_dssp ESTTCCCCCHHHHHHHHHHHHHHHTTC--CCE-EEEEEEESCGGGT-----STTHHHHHHH------------------H
T ss_pred EEeCcccCcHHHHHHHHHHHHHHHcCC--CCC-cEEEEEEeCCCCC-----ChhHHHHHHH------------------h
Confidence 445999999999999999999985 566 9999999999984 3688877521 1
Q ss_pred HHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEE--EEEEecCCCCCCCCCCCC-CC
Q 015341 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLK--VTVRGSQGHAGTVPMSMR-QD 211 (408)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--i~v~G~~~Hs~~~p~~~g-~n 211 (408)
... + -.++.+++ .|. +. .......+..|.+|...++ |+++|+++|||. | +.. .|
T Consensus 178 ~~~----------~---~~~d~~~~---~~~--~~---~~~~~~~i~~g~~G~~~~~~~v~~~G~~~H~~~-~-~~~~~n 234 (472)
T 3pfe_A 178 KER----------I---GKPSLVIC---LDS--GA---GNYEQLWMTTSLRGNLVGKLTVELINEGVHSGS-A-SGIVAD 234 (472)
T ss_dssp HHH----------H---CCCSEEEE---ECC--BC---SCSSSCEEEEEECEEEEEEEEEESCSSCBCHHH-H-TTTSCC
T ss_pred Hhh----------c---cCCCEEEE---eCC--Cc---CCCCCeeEEEeeeEEEEEEEEEEeCCCCcccCC-C-CCCCCC
Confidence 000 0 01232222 231 10 0011246778899988877 555899999998 6 444 59
Q ss_pred HHHHHHHHHHHHHHHH-cCCC-----Ccc-----------------------ccCCCCCCcccccCCC-----------C
Q 015341 212 PMTAAAELIVLLERLC-KHPK-----DFL-----------------------SYDGRSNCSTLESLSS-----------S 251 (408)
Q Consensus 212 ai~~~~~~i~~l~~~~-~~~~-----~~~-----------------------~~~~~~~~~~~~~~~~-----------~ 251 (408)
|+..+++++.+|+++. .+.. +.+ +++... ++..+ .
T Consensus 235 ai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 309 (472)
T 3pfe_A 235 SFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSA-----KPVIQDKQQLILNRTWR 309 (472)
T ss_dssp HHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTC-----CCSCSCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCc-----cccccchHHHHHHhhcC
Confidence 9999999999998762 1100 000 000000 11111 5
Q ss_pred eEEEEEEEEec---CCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEEee-cCCCccC---CH
Q 015341 252 LVCTVGEISSW---PSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKH-DANAVMC---DA 324 (408)
Q Consensus 252 ~t~~v~~i~g~---g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~ 324 (408)
+|++++.|+++ |++.|+||++|++++++|++|.++.+++.++|+++++..+ .++++++++... .+||+.. ++
T Consensus 310 ~tl~i~~i~gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~~~~~~pp~~~~~n~~ 388 (472)
T 3pfe_A 310 PALTVTGADGFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKIQNGGSKGWNAPLLSD 388 (472)
T ss_dssp CEEEEEEEESCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEECSCCBCCEECCCCCH
T ss_pred CcEEEeeeecCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEecCCCCCcccCCCCCh
Confidence 79999999983 2799999999999999999999999999999999998765 678899888776 7888753 45
Q ss_pred HHHHHHHHHHHHHHhhccCCccccccccCCccchH-H-HHhhhhcCee-EEEEecCC--CCCCCCCCCCChhhHHHHHHH
Q 015341 325 DLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHD-A-MAMSHLTKVG-MLFVRCRG--GISHSPAEHVLDDDVWAAGLA 399 (408)
Q Consensus 325 ~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD-~-~~~~~~~p~~-~~~~g~~~--~~~H~~~E~i~i~~~~~~~~~ 399 (408)
.+++.+++++++++|.++ ... .+ |++| + ++|...+|.+ ++++|+++ ...|+|||+++++++.+++++
T Consensus 389 ~l~~~~~~a~~~~~G~~~-----~~~--~~-gg~d~f~~~~~~~~Pg~p~v~~G~g~~~~~~H~p~E~i~~~~l~~g~~~ 460 (472)
T 3pfe_A 389 WLAKAASEASMTYYDKPA-----AYM--GE-GGTIPFMSMLGEQFPKAQFMITGVLGPHSNAHGPNEFLHLDMVKKLTSC 460 (472)
T ss_dssp HHHHHHHHHHHHHHSSCC-----EEE--EE-SSCCHHHHHHHHHCTTCEEEEECCBCTTCCTTSTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCc-----eec--cC-CCchhhHHHHHHHcCCCCEEEecCCCCCCCCcCCCcceeHHHHHHHHHH
Confidence 588899999999887631 112 22 4555 5 6677667765 66777653 579999999999999999999
Q ss_pred HHHHHHhh
Q 015341 400 VLAFLETH 407 (408)
Q Consensus 400 ~~~~l~~l 407 (408)
|..++.+|
T Consensus 461 l~~~l~~l 468 (472)
T 3pfe_A 461 VSYVLYSF 468 (472)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 22
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=1.7e-39 Score=316.13 Aligned_cols=307 Identities=15% Similarity=0.048 Sum_probs=236.2
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEccc----CcEEEEecCCCCCCCeEEEeeccccccCC--------------------CC
Q 015341 4 ASVRAGNLIRQWMEDAGLRTWVDHL----GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GI 59 (408)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~~~~~~~----~nvia~~~g~~~~~~~i~l~~H~D~Vp~~--------------------G~ 59 (408)
+|.++++||.++|+ ||+++.+.. +|+++ ++|+ |+|+|++||||||.+ |+
T Consensus 32 ~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~ 104 (369)
T 2f7v_A 32 AEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGV 104 (369)
T ss_dssp SSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTT
T ss_pred cHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEeccc
Confidence 89999999999999 999877654 58999 8753 789999999999864 45
Q ss_pred CCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCC
Q 015341 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (408)
Q Consensus 60 ~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 139 (408)
.|||++++++|.+++. ++++|.|+|+++||.+ ++.|++.+++...
T Consensus 105 ~D~k~g~a~~l~a~~~---------~~~~v~~~~~~~EE~~----g~~G~~~~~~~~~---------------------- 149 (369)
T 2f7v_A 105 CDIKGAAAALVAAANA---------GDGDAAFLFSSDEEAN----DPRCIAAFLARGL---------------------- 149 (369)
T ss_dssp TTTHHHHHHHHHHHTT---------CCCCEEEEEESCTTSS----SCCHHHHHHTTCC----------------------
T ss_pred ccccHHHHHHHHHHhc---------CCCCEEEEEEeCcccC----CCcCHHHHHhcCC----------------------
Confidence 7999999999988765 3689999999999972 2479988763100
Q ss_pred CCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCC-CCCCHHHHHHH
Q 015341 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAE 218 (408)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~-~g~nai~~~~~ 218 (408)
.+|. + +..+|+ . ..++.+.+|..+++|+++|+++|+|. | + .|.||+..+++
T Consensus 150 -------------~~d~--~---i~~e~~------~--~~i~~~~~g~~~~~i~v~G~~~Ha~~-p-~~~g~nAi~~~~~ 201 (369)
T 2f7v_A 150 -------------PYDA--V---LVAEPT------M--SEAVLAHRGISSVLMRFAGRAGHASG-K-QDPAASALHQAMR 201 (369)
T ss_dssp -------------CCSE--E---EECCCS------T--TCBBCCBCCEEEEEEEEECCCC--------CTTSCHHHHHHH
T ss_pred -------------CCCE--E---EECCCC------C--CcceeecCceEEEEEEEeeeCcccCC-C-CcCCCCHHHHHHH
Confidence 1221 2 122221 1 23556789999999999999999996 8 7 89999999999
Q ss_pred HHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHH
Q 015341 219 LIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQL 298 (408)
Q Consensus 219 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~ 298 (408)
++.+|+.+..+.... . .+|..+ ++++++.|++ |.+.|+||++|++++++|++|.++.+++.++|++++
T Consensus 202 ~i~~l~~~~~~~~~~-----~-----~~~~~~-~~~~vg~i~g-G~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~ 269 (369)
T 2f7v_A 202 WGGKALDHVESLAHA-----R-----FGGLTG-LRFNIGRVDG-GIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFA 269 (369)
T ss_dssp HHHHHHHHHHHTTTC-----E-----ETTEES-CEEEEEEEEE-CSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTC
T ss_pred HHHHHHhhhhhhccc-----c-----cCcccC-CceEEEEeec-CCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHH
Confidence 999998775421100 0 012222 7999999999 899999999999999999999999999999999887
Q ss_pred HHHHHHcCCeEEEEEe-ecCCCccCC-HHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhh-cCeeEEEEe
Q 015341 299 YQICEKRSVSCIVERK-HDANAVMCD-ADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVR 375 (408)
Q Consensus 299 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~g 375 (408)
+. .+++++++.. ..+||+.++ +++++.+++++++.+|.+ . .. .++|++|+++|... +|++ .+|
T Consensus 270 ~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~-----~-~~--~~~g~~D~~~~~~~g~p~v--~~G 335 (369)
T 2f7v_A 270 DP----AAAHFEETFRGPSLPSGDIARAEERRLAARDVADALDLP-----I-GN--AVDFWTEASLFSAGGYTAL--VYG 335 (369)
T ss_dssp SS----CCSEEEEEEEECCBSCSSHHHHHHHHHHHHHHHHHTTCC-----B-CC--CBSSCCTHHHHHHTTCCEE--ECC
T ss_pred HH----hcCceEEEeccCCCCccCCCCCHHHHHHHHHHHHhhCCC-----C-Cc--cccccCcHHHHhhCCCCEE--EEC
Confidence 53 3577777765 367888766 789999999999887753 1 12 24589999999887 7877 446
Q ss_pred cCC-CCCCCCCCCCChhhHHHHHHHHHHHHHh
Q 015341 376 CRG-GISHSPAEHVLDDDVWAAGLAVLAFLET 406 (408)
Q Consensus 376 ~~~-~~~H~~~E~i~i~~~~~~~~~~~~~l~~ 406 (408)
++. ...|++||+++++++.+++++|..++.+
T Consensus 336 pg~~~~~H~~~E~~~~~~l~~~~~~~~~~~~~ 367 (369)
T 2f7v_A 336 PGDIAQAHTADEFVTLAQLQRYVESVNRIING 367 (369)
T ss_dssp SSCGGGTTCTTCEEEHHHHHHHHHHHHHHHHC
T ss_pred CCCccccCCCCceEEHHHHHHHHHHHHHHHHh
Confidence 654 5789999999999999999999999875
No 23
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=8.9e-39 Score=316.03 Aligned_cols=316 Identities=16% Similarity=0.137 Sum_probs=246.3
Q ss_pred HHHHHHHHHHHHHHHHcCcE-EEEcccCcEEEEecCCCC-CCCeEEEeeccccccCC--------------C--------
Q 015341 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G-------- 58 (408)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~-~~~~~~~nvia~~~g~~~-~~~~i~l~~H~D~Vp~~--------------G-------- 58 (408)
.+|.++++||.++|+++|++ ++.+..+||+++++|+++ ++|+|+|.+||||||.. |
T Consensus 29 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~g~~~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g 108 (417)
T 1fno_A 29 EGQWKLLRLLKQQLEEMGLVNITLSEKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIG 108 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECTTCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSS
T ss_pred ccHHHHHHHHHHHHHHcCCCeEEECCCceEEEEECCCCCCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeeccccc
Confidence 38999999999999999998 888877899999987542 25899999999999743 2
Q ss_pred -----------------------------CCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcch
Q 015341 59 -----------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGS 109 (408)
Q Consensus 59 -----------------------------~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs 109 (408)
++|||++++++|.|++.|++.+ .++++|+|+|+++||.+ .|+
T Consensus 109 ~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g------~Ga 179 (417)
T 1fno_A 109 DEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP---IPHGDIKVAFTPDEEVG------KGA 179 (417)
T ss_dssp SCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS---CCCCCEEEEEESCGGGT------CTT
T ss_pred ccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC---CCCCcEEEEEEeccccC------CCh
Confidence 1899999999999999999886 47899999999999974 477
Q ss_pred HHHhccCCccccccccCCCCcHHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeecee
Q 015341 110 AALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTR 189 (408)
Q Consensus 110 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 189 (408)
+.+.. +. +.++ ++ ++++++ + .+ .++.+.+|..+
T Consensus 180 ~~~~~------------------~~-----------------~~~d--~~---i~~d~~-~---~g---~i~~~~~g~~~ 212 (417)
T 1fno_A 180 KHFDV------------------EA-----------------FGAQ--WA---YTVDGG-G---VG---ELEFENFNAAS 212 (417)
T ss_dssp TTCCH------------------HH-----------------HCCS--EE---EECCCC-S---TT---BEECCBCEEEE
T ss_pred hhhch------------------hh-----------------cCCC--EE---EEeCCC-C---cC---eeEEecCCcee
Confidence 65420 01 1122 22 233332 1 11 25567899999
Q ss_pred EEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCccee
Q 015341 190 LKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVI 269 (408)
Q Consensus 190 ~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~Nvi 269 (408)
++|+++|+++|+|..| +.|+||+..+++++..|+.+..+. .+....++++++.|++ |
T Consensus 213 ~~i~~~G~~~Hs~~~p-~~g~nAi~~~a~~i~~l~~~~~~~---------------~~~~~~~~~~v~~i~g-G------ 269 (417)
T 1fno_A 213 VNIKIVGNNVHPGTAK-GVMVNALSLAARIHAEVPADEAPE---------------TTEGYEGFYHLASMKG-T------ 269 (417)
T ss_dssp EEEEEECBCCCGGGCT-TTCBCHHHHHHHHHHTSCTTSSGG---------------GCCTTCCEEEEEEEEE-C------
T ss_pred EEEEEEeeccCCCCCc-cccCCHHHHHHHHHHhhhccCCcc---------------cccccccEEEEEEEee-c------
Confidence 9999999999999559 689999999999999877543210 0111356899999998 5
Q ss_pred CCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCe--EEEEEeecCCC----ccCCHHHHHHHHHHHHHHHhhccC
Q 015341 270 PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVS--CIVERKHDANA----VMCDADLSSQLKSASYAALKRMTG 343 (408)
Q Consensus 270 P~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~g~~~~ 343 (408)
|++|++++++|++|.++.+++.++|+++++..+..++.. +++++...+++ +.+++++++.+++++++ +|.+
T Consensus 270 p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~-- 346 (417)
T 1fno_A 270 VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRD-CHIT-- 346 (417)
T ss_dssp SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTTTCCTTCCEEEEEEEEECCCHHHHHTSTHHHHHHHHHHHH-TTCC--
T ss_pred cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeccccchhccccCCCHHHHHHHHHHHH-cCCC--
Confidence 999999999999999999999999999999877666643 66665554554 35788899999999888 5652
Q ss_pred CccccccccCCccchHHHHhhhh-cCeeEEEEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 344 ATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 344 ~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
.....++|++|+++|... +|++. +|++....|++||+++++++.+++++|..++.++
T Consensus 347 -----~~~~~~~ggtD~~~~~~~gip~v~--~G~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~ 404 (417)
T 1fno_A 347 -----PEMKPIRGGTDGAQLSFMGLPCPN--LFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELT 404 (417)
T ss_dssp -----CBCCCBSSCCHHHHHTTTTCCCCE--ECCSEESTTSTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred -----ceeccceeccchHhHHhcCCCEEE--EcCCCCCCCCcccccCHHHHHHHHHHHHHHHHHH
Confidence 122234589999999876 78774 3665546899999999999999999999998875
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=1.5e-37 Score=313.10 Aligned_cols=322 Identities=18% Similarity=0.166 Sum_probs=242.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCC--CCCCeEEEeeccccccCCC--------------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDAG-------------------- 58 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~--~~~~~i~l~~H~D~Vp~~G-------------------- 58 (408)
+|++|.++++||.++|+++|++++.+..+|++++++|+. +++|+|+|++|||+||.++
T Consensus 26 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~ 105 (487)
T 2qyv_A 26 PSYKEEQLAQFIINWAKTKGFFAERDEVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDW 105 (487)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSE
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCE
Confidence 367899999999999999999998887789999998642 2468999999999998642
Q ss_pred ----CC----CChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCc
Q 015341 59 ----IF----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (408)
Q Consensus 59 ----~~----D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~ 130 (408)
++ |||++++++|.+++ +.+ .++++|.|+|+++||.+ ..|++.+++.
T Consensus 106 l~g~G~~lgaD~k~g~a~~l~a~~---~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~--------------- 159 (487)
T 2qyv_A 106 VKAKGTTLGADNGIGMASALAVLE---SND---IAHPELEVLLTMTEERG-----MEGAIGLRPN--------------- 159 (487)
T ss_dssp EEETTBCCCHHHHHHHHHHHHHHH---CSS---SCCSSEEEEEESCTTTT-----CHHHHTCCSS---------------
T ss_pred EEeCCCCcCCcCHHHHHHHHHHHH---hCC---CCCCCEEEEEEeccccC-----CHHHHHHHHh---------------
Confidence 33 99999999998886 334 47899999999999974 3688876531
Q ss_pred HHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCcccccC--CCc----------ceeEEeeeeceeEEEEEEe-c
Q 015341 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWV--GFP----------LGVVQGIAGQTRLKVTVRG-S 197 (408)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~~~~~g~~~~~i~v~G-~ 197 (408)
+ +.++ ++ ++.++... +.. +.+ .++..+.+| .+++|+++| +
T Consensus 160 --------~------------~~~d--~~---~~~d~~~~-~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~ 212 (487)
T 2qyv_A 160 --------W------------LRSE--IL---INTDTEEN-GEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLR 212 (487)
T ss_dssp --------C------------CCCS--EE---EECCCCCT-TEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCC
T ss_pred --------c------------cCCC--EE---EEEccCCC-CeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccC
Confidence 0 0111 11 22222110 000 000 011123445 789999999 8
Q ss_pred CCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEE
Q 015341 198 QGHAGTVPMSMR-QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFT 276 (408)
Q Consensus 198 ~~Hs~~~p~~~g-~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~ 276 (408)
++|||.+| +.+ .||+..+++++.+|+.+.. .++++++.|++ |...|+||++|++.
T Consensus 213 ~~Hsg~~~-~~g~~nAi~~~~~~i~~l~~~~~----------------------~~~~~v~~i~g-G~~~NvIP~~a~~~ 268 (487)
T 2qyv_A 213 GGHSGVDI-HTGRANAIKVLLRFLAELQQNQP----------------------HFDFTLANIRG-GSIRNAIPRESVAT 268 (487)
T ss_dssp CCBTTTTT-TSCCCCHHHHHHHHHHHHHHHCT----------------------TCCEEEEEEEE-ESCTTBCCCCEEEE
T ss_pred CccCCccc-ccCCCCHHHHHHHHHHHHhhccC----------------------CCcEEEEEEeC-CCcCcccCCceEEE
Confidence 99999966 465 8999999999999987621 45689999999 89999999999999
Q ss_pred EEe----------------------------------------eCCChHHHHHHHHHHHHH-------------------
Q 015341 277 VDL----------------------------------------RAIDDAGRETVLYELSNQ------------------- 297 (408)
Q Consensus 277 ~~i----------------------------------------R~~p~~~~~~v~~~i~~~------------------- 297 (408)
+++ |++|.++.+.+.+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~i~~~~~gv~~~~~~~~~~~~~s~ 348 (487)
T 2qyv_A 269 LVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSL 348 (487)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSEEECHHHHHHHHHHHHHSCCEEEEECSSSTTCEEEEE
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeccccccccCHHHHHHHHHHHHhCCCcceeeccccCCceEecc
Confidence 999 999999999988888775
Q ss_pred --------------------------------HHHHHHHcCCeEEEEEeecCCCcc--CCHHHHHHHHHHHHHHHhhccC
Q 015341 298 --------------------------------LYQICEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTG 343 (408)
Q Consensus 298 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~g~~~~ 343 (408)
++..+..+++++++. ..+||+. .++++++.+.+++++++|.++
T Consensus 349 nl~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~p~~~~~~d~~l~~~~~~~~~~~~G~~~- 425 (487)
T 2qyv_A 349 SIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNINLS--GDYPGWEPQSHSDILDLTKTIYAQVLGTDP- 425 (487)
T ss_dssp EEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEEEEE--EEECCBCCCSCCHHHHHHHHHHHHHHSSCC-
T ss_pred ceEEEEEcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceEEEC--CCCCCCCCCCCCHHHHHHHHHHHHHhCCCC-
Confidence 345666788887665 4567765 478899999999999888631
Q ss_pred CccccccccCCccchHHHHhhhhcCee-EEEEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhhC
Q 015341 344 ATQHEIPVIMSGAGHDAMAMSHLTKVG-MLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 408 (408)
Q Consensus 344 ~~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l~ 408 (408)
... .++|++|+++|.+..|.+ ++.+|+.....|+|||+++++++.+++++|..++.+|.
T Consensus 426 ----~~~--~~~gg~D~~~~~~~~pg~~~v~~Gp~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~l~ 485 (487)
T 2qyv_A 426 ----EIK--VIHAGLECGLLKKIYPTIDMVSIGPTIRNAHSPDEKVHIPAVETYWKVLTGILAHIP 485 (487)
T ss_dssp ----EEE--EESSCCTHHHHHHHCTTSEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHHHHHHCC
T ss_pred ----eEE--EEeccccHHHHHhhCCCCCEEEECCCCCCCCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 122 345899999998875543 33456654579999999999999999999999998763
No 25
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=5.5e-37 Score=308.80 Aligned_cols=356 Identities=16% Similarity=0.171 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEec-CCCCCCCeEEEeeccccccCC--------------------CCCC
Q 015341 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVE-GLNASAQALLIGSHLDTVVDA--------------------GIFD 61 (408)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~-g~~~~~~~i~l~~H~D~Vp~~--------------------G~~D 61 (408)
.++.++++||.++|+++||+++.. +|+++..+ |. ++|+|+|++||||||++ |+.|
T Consensus 63 ~~~~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D 138 (492)
T 3khx_A 63 PGPRKALDYMYEIAHRDGFTTHDV--DHIAGRIEAGK--GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLD 138 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEE--TTTEEEEEEEC--SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTT
T ss_pred hHHHHHHHHHHHHHHHcCCcceEe--CCEEEEEEeCC--CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCcc
Confidence 356799999999999999988653 57666554 43 35899999999999863 5679
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccc-cCCCCcHHHHHHhCCC
Q 015341 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVS-DKSGVTVLDALRENSI 140 (408)
Q Consensus 62 ~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~ 140 (408)
||++++++|.|+++|+++++ +++++|.|+|+++||.+ ..|++.+++......+.+. |.+.-.+ .|.
T Consensus 139 ~Kg~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g-----~~g~~~~~~~~~~~~~~~~~d~~~p~~------~g~ 205 (492)
T 3khx_A 139 DKGPTIAAYYAIKILEDMNV--DWKKRIHMIIGTDEESD-----WKCTDRYFKTEEMPTLGFAPDAEFPCI------HGE 205 (492)
T ss_dssp THHHHHHHHHHHHHHHHTTC--CCSSEEEEEEECCTTCC-----CCTTSHHHHHSCCCSEEECSSCSSCSC------CCB
T ss_pred CcHHHHHHHHHHHHHHHcCC--CCCCCEEEEEECCccCC-----CcCHHHHHHhCcCCCEEEecCCCccEE------Eec
Confidence 99999999999999999987 78999999999999985 3789888754332211111 1111000 000
Q ss_pred Ccchhhh-----------------------hhccCCCCCceeeEEeeccCCcccccCCC-c----cee---EEeeeece-
Q 015341 141 DIAEESL-----------------------LQLKYDPASVWGYIEVHIEQGPVLEWVGF-P----LGV---VQGIAGQT- 188 (408)
Q Consensus 141 ~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~---~~~~~g~~- 188 (408)
++..... ...+..|+...+++ .++... . .+. ..+.+|..
T Consensus 206 ~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv---------~ept~~~~~~~~~~~~~~~~g~kG~~~ 276 (492)
T 3khx_A 206 KGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARV---------LVKENMTDVIQDFEYFLEQNHLQGDST 276 (492)
T ss_dssp CEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEE---------EECSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEe---------ecccchHHHHHHHHHHHhhcCceeEEE
Confidence 0000000 00001112111111 011100 0 000 12347777
Q ss_pred ----eEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHHc---CCC-CccccCCCCCCcccccCCCCeEE
Q 015341 189 ----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE------RLCK---HPK-DFLSYDGRSNCSTLESLSSSLVC 254 (408)
Q Consensus 189 ----~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~------~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~t~ 254 (408)
+++|+++|+++|+|. | +.|+|||..+++++.+|+ .+.. +.+ ... ....+.....++..+.+++
T Consensus 277 ~~~~~~~i~v~GkaaHas~-P-~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~d~~~G~~t~ 353 (492)
T 3khx_A 277 VDSGILVLTVEGKAVHGMD-P-SIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSD-FGEKMGMKFHTDVMGDVTT 353 (492)
T ss_dssp EETTEEEEEEECBCCCC--------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCT-TSGGGTCC-------CCEE
T ss_pred ecCCeEEEEEEeEEcccCC-C-ccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCC-CccccCCccccCCcCccEE
Confidence 999999999999997 9 699999999999998875 2210 000 000 0000000011244468999
Q ss_pred EEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCc--cCCHHHHHHHHH
Q 015341 255 TVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAV--MCDADLSSQLKS 332 (408)
Q Consensus 255 ~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 332 (408)
|++.|++ +. |++|++.+|+|++|.++.+++.++|+++++ .+++++++.. .++|+ ..++++++.+.+
T Consensus 354 n~g~i~~-g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~~i~~--~~~p~~~~~d~~lv~~l~~ 421 (492)
T 3khx_A 354 NIGVITY-DN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEVKLGK--VQPPHYVDKNDPFVQKLVT 421 (492)
T ss_dssp EEEEEEE-ET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEEEEEE--EECCBCCGGGCHHHHHHHH
T ss_pred eeeEEEE-ec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEEEEec--cCCceecCCCcHHHHHHHH
Confidence 9999998 54 999999999999999999999999988875 4677776653 34554 456789999999
Q ss_pred HHHHHHhhccCCccccccccCCccchHHHHhhhhcCeeEEEEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 333 ASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 333 ~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
++++++|.+ .....++|++|++++...+|....| ++....+|++||+++++++.+++++|..+|.+|
T Consensus 422 a~~~~~G~~-------~~~~~~gggtDa~~~~~~v~~G~~f-Pg~~~~~H~~dE~v~i~~l~~~~~i~~~~l~~l 488 (492)
T 3khx_A 422 AYRNQTNDM-------TEPYTIGGGTYARNLDKGVAFGAMF-SDSEDLMHQKNEYITKKQLFNATSIYLEAIYSL 488 (492)
T ss_dssp HHHTTCC-------------------------------------------CCSCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-------CeEEeeehhHHHHHhhCceEECCcC-CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHH
Confidence 998876653 2333467999999997644433322 333467999999999999999999999999876
No 26
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=1.2e-36 Score=306.03 Aligned_cols=320 Identities=19% Similarity=0.176 Sum_probs=233.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCC--CCCCeEEEeeccccccCC---------------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA--------------------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~--~~~~~i~l~~H~D~Vp~~--------------------- 57 (408)
+|++|.++++||.++|+++||+++.+..+|++++++|+. .++|+|+|.|||||||..
T Consensus 29 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~ 108 (490)
T 3mru_A 29 PSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEW 108 (490)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTE
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEEcCCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCe
Confidence 478899999999999999999998888889999998652 246899999999999853
Q ss_pred ----CCC---CChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCc
Q 015341 58 ----GIF---DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (408)
Q Consensus 58 ----G~~---D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~ 130 (408)
|.. |||+++|++|.++ ++.+ .++++|.|+|+++||.+ +.|++.+....-
T Consensus 109 l~g~G~~lgaD~k~g~a~~l~~l---~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~~~------------- 164 (490)
T 3mru_A 109 VTAKGTTLGADNGIGMASCLAVL---ASKE---IKHGPIEVLLTIDEEAG-----MTGAFGLEAGWL------------- 164 (490)
T ss_dssp EEETTBCCCHHHHTTHHHHHHHH---HCSS---CCCCSEEEEEESCSSST-----TGGGGTCCSSSC-------------
T ss_pred EecCCCccCCCCHHHHHHHHHHH---HhCC---CCCCCEEEEEEcccccc-----cHhHHHhhhccc-------------
Confidence 332 9999999888765 3444 57899999999999984 478887653100
Q ss_pred HHHHHHhCCCCcchhhhhhccCCCCCceeeEEeeccCCc---c-cc-cCCCcce------eEEeeeeceeEEEEEEe-cC
Q 015341 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGP---V-LE-WVGFPLG------VVQGIAGQTRLKVTVRG-SQ 198 (408)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~-~~~~~~~------~~~~~~g~~~~~i~v~G-~~ 198 (408)
.++ ++ ++.++.. . .+ ..+.+.. ...+.+|..+++|+++| ++
T Consensus 165 ----------------------~~~--~~---~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~ 217 (490)
T 3mru_A 165 ----------------------KGD--IL---LNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKG 217 (490)
T ss_dssp ----------------------CSS--EE---EECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCC
T ss_pred ----------------------CCC--EE---EEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCC
Confidence 000 11 1111110 0 00 0000000 12346789999999999 89
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHHHHHHHHHcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEE
Q 015341 199 GHAGTVPMSMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTV 277 (408)
Q Consensus 199 ~Hs~~~p~~~g~-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~ 277 (408)
+|||..| +.|. ||+..+++++..|++ ..+++++.|+| |.+.|+||++|++.+
T Consensus 218 gHs~~~p-~~g~~nai~~~~~~l~~l~~-------------------------~~~~~v~~i~g-G~~~NvIP~~a~~~~ 270 (490)
T 3mru_A 218 GHSGCDI-HTGRGNANKLIGRFLAGHAQ-------------------------ELDLRLVEFRG-GSLRNAIPREAFVTV 270 (490)
T ss_dssp EETTTSS-SSCCCCHHHHHHHHHHHHTT-------------------------TTTCEEEEEEE-CSCTTEECCCEEEEE
T ss_pred ccccccc-ccCCcCHHHHHHHHHHHHHh-------------------------cCcEEEEEEEC-CCCCcccCCccEEEE
Confidence 9999778 6999 999999999988763 12378899999 899999999999999
Q ss_pred EeeCCChHHHHHHHHHHHHHHHHH--------------------------------------------------------
Q 015341 278 DLRAIDDAGRETVLYELSNQLYQI-------------------------------------------------------- 301 (408)
Q Consensus 278 ~iR~~p~~~~~~v~~~i~~~~~~~-------------------------------------------------------- 301 (408)
++|..+.+..+++.+++.+.++..
T Consensus 271 ~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l~~~~~G~~~~~~~~~g~v~~S~ 350 (490)
T 3mru_A 271 ALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSL 350 (490)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHSCCEEEEECTTTTSCEEEEE
T ss_pred EECcccHHHHHHHHHHHHHHHHHHhhccCCCeEEEEEecCCccccCCHHHHHHHHHHHHHCCCccceeccccCCCeeEEE
Confidence 888776655555555544443322
Q ss_pred ------------------------------------HHHcCCeEEEEEeecCCCcc--CCHHHHHHHHHHHHHHHhhccC
Q 015341 302 ------------------------------------CEKRSVSCIVERKHDANAVM--CDADLSSQLKSASYAALKRMTG 343 (408)
Q Consensus 302 ------------------------------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~g~~~~ 343 (408)
+..+++++++ ...+||+. .++++++.+.+++++++|.+
T Consensus 351 n~gv~~~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~~~--~~~~p~~~~~~d~~lv~~l~~a~~~~~G~~-- 426 (490)
T 3mru_A 351 NVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEF--SGAYPGWKPDADSEIMAIFRDMYEGIYGHK-- 426 (490)
T ss_dssp EEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEEE--EEEECCBCCCTTCHHHHHHHHHHHTTSSSC--
T ss_pred EEEEEEEeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeEEe--cCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--
Confidence 1234555443 35667775 46789999999999988763
Q ss_pred CccccccccCCccchHHHHhhhhcCee-EEEEecCCCCCCCCCCCCChhhHHHHHHHHHHHHHhh
Q 015341 344 ATQHEIPVIMSGAGHDAMAMSHLTKVG-MLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 344 ~~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~g~~~~~~H~~~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
+....++|++|+++|...+|.+ .+.+|+.....|+|||++.++++.+++++|.++|.+|
T Consensus 427 -----~~~~~~ggg~d~~~~~~~~p~~~~v~fGp~~~~~H~p~E~v~i~~l~~~~~~l~~~l~~l 486 (490)
T 3mru_A 427 -----PNIMVIHAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMVALLEAI 486 (490)
T ss_dssp -----CCCEEESSCCHHHHTTSSCTTCEEEECCCCEESTTSTTCEEEHHHHHHHHHHHHHHHHHC
T ss_pred -----CeEEEEEecHHHHHHHHhCCCCCEEEECCCCCCCCCCCccccHHHHHHHHHHHHHHHHHh
Confidence 2333467899999999888752 2334665557999999999999999999999999876
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.6e-34 Score=287.31 Aligned_cols=343 Identities=14% Similarity=0.103 Sum_probs=230.2
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccCC---------------------CCCCC
Q 015341 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------GIFDG 62 (408)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~---------------------G~~D~ 62 (408)
+++++++||.++|+++||+++.....++++.+ |. ++|+|+|++||||||.+ |++||
T Consensus 44 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~-g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~ 120 (470)
T 1lfw_A 44 GPVDAMTKFLSFAKRDGFDTENFANYAGRVNF-GA--GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADD 120 (470)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEETTTEEEEEE-CC--CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSS
T ss_pred HHHHHHHHHHHHHHHcCCeEEEecCeEEEEEe-CC--CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccC
Confidence 56899999999999999998764333467776 54 35899999999999842 34899
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCcccccc-ccCCC-CcHHHHHHhCCC
Q 015341 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRV-SDKSG-VTVLDALRENSI 140 (408)
Q Consensus 63 k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~-~~~~~-~~~~~~~~~~g~ 140 (408)
|++++++|.|+++|+++++ +++++|.|+|+++||.+ ..|++.+++........+ .|.++ +.+ |.
T Consensus 121 K~~~a~~l~a~~~l~~~~~--~~~~~i~~i~~~~EE~g-----~~G~~~~~~~~~~~~~~~~~D~~~~~~~-------ge 186 (470)
T 1lfw_A 121 KGPSLTAYYGMLLLKEAGF--KPKKKIDFVLGTNEETN-----WVGIDYYLKHEPTPDIVFSPDAEYPIIN-------GE 186 (470)
T ss_dssp HHHHHHHHHHHHHHHHHTC--CCSSEEEEEEESCTTTT-----CHHHHHHHHHSCCCSEEEESSEESSEEE-------EE
T ss_pred hHHHHHHHHHHHHHHHcCC--CCCCCEEEEEecCcccC-----CccHHHHHHhCcCCcEEEEeCCCceEEE-------ec
Confidence 9999999999999999987 78999999999999984 368888764321111000 11110 000 00
Q ss_pred CcchhhhhhccCCCCCceeeEEeeccCC----c---ccccCCCcceeE-------E-------------------eeeec
Q 015341 141 DIAEESLLQLKYDPASVWGYIEVHIEQG----P---VLEWVGFPLGVV-------Q-------------------GIAGQ 187 (408)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~-------~-------------------~~~g~ 187 (408)
.-...+++++.+. . .....+...+++ . +.+|.
T Consensus 187 ---------------~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 251 (470)
T 1lfw_A 187 ---------------QGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGS 251 (470)
T ss_dssp ---------------CEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEE
T ss_pred ---------------cceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccc
Confidence 0001112222110 0 000000000010 0 12454
Q ss_pred e-----eEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHH---cCCCC-ccccCCCCCCcccccCCCCe
Q 015341 188 T-----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE------RLC---KHPKD-FLSYDGRSNCSTLESLSSSL 252 (408)
Q Consensus 188 ~-----~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~------~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~ 252 (408)
. +++|+++|+++|++. | +.|+||+.++++++..|+ .+. .+... .. ..........++..+++
T Consensus 252 ~~~~~~~~~i~v~G~~~Ha~~-P-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 328 (470)
T 1lfw_A 252 FEINDESADIVLIGQGAHASA-P-QVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDF-YGKKLGIFHHDDLMGDL 328 (470)
T ss_dssp EEEETTEEEEEEECBCCBTTC-G-GGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCT-TSTTTTCCCEETTTEEC
T ss_pred eeecCCcEEEEEeecccCCCC-C-ccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCC-cccccCCcccccccccc
Confidence 4 899999999999997 9 699999999999998774 221 11000 00 00000000011222467
Q ss_pred EEEEEEEEecCCCcceeCCe-EEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCcc--CCHHHHHH
Q 015341 253 VCTVGEISSWPSASNVIPGE-VTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVM--CDADLSSQ 329 (408)
Q Consensus 253 t~~v~~i~g~g~~~NviP~~-a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 329 (408)
+++++.|++ +|++ |++++++|++|.++.+++.++|+++++. +++ +++...+||+. +++++++.
T Consensus 329 t~~~g~i~~-------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g~~--v~~~~~~~~~~~~~d~~l~~~ 394 (470)
T 1lfw_A 329 ASSPSMFDY-------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----ILD--VTYNGFEEPHYVPGSDPMVQT 394 (470)
T ss_dssp EEEEEEEEE-------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----TEE--EECSCCBCCEECCTTCHHHHH
T ss_pred eEEEEEEEE-------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----CeE--EEEEeCCCceeeCCCCHHHHH
Confidence 889888876 4899 9999999999999999999999998763 544 45556677764 47789999
Q ss_pred HHHHHHHHHhhccCCccccccccCCccchHHHHhhhhcCeeEEEEec---C-CCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 015341 330 LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRC---R-GGISHSPAEHVLDDDVWAAGLAVLAFLE 405 (408)
Q Consensus 330 l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~g~---~-~~~~H~~~E~i~i~~~~~~~~~~~~~l~ 405 (408)
+.+++++++|.+ .....++|++|++++. |.+ .| |+ + ....|+|||+++++++.+++++|..++.
T Consensus 395 ~~~a~~~~~g~~-------~~~~~~~g~~d~~~~~---~~v-~~-G~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~ 462 (470)
T 1lfw_A 395 LLKVYEKQTGKP-------GHEVVIGGGTYGRLFE---RGV-AF-GAQPENGPMVMHAANEFMMLDDLILSIAIYAEAIY 462 (470)
T ss_dssp HHHHHHHHHCCC-------CCEEEESSCCGGGGST---TCE-EC-CEECTTCCCCTTSTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------CceeeecCHhHHHhCC---CeE-EE-CCCCCCCCCCCCCCCcceEHHHHHHHHHHHHHHHH
Confidence 999999988763 1112245889998874 543 33 43 2 2468999999999999999999999998
Q ss_pred hh
Q 015341 406 TH 407 (408)
Q Consensus 406 ~l 407 (408)
++
T Consensus 463 ~l 464 (470)
T 1lfw_A 463 EL 464 (470)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.90 E-value=9e-23 Score=189.24 Aligned_cols=104 Identities=19% Similarity=0.256 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEc---ccCcEEEEecCCCCCCCeEEEeeccccccCC--------------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~---~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~-------------------- 57 (408)
+|++|.++++||.++|+++||+++.. ..+|+++++ |. ++|+|+|++||||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~ 97 (268)
T 3t68_A 21 VTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARR-GT--QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLH 97 (268)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEE
T ss_pred CCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEe-CC--CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEE
Confidence 36788899999999999999987654 335899998 54 35899999999999863
Q ss_pred --CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHh
Q 015341 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (408)
Q Consensus 58 --G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~ 113 (408)
|+.|||++++++|.|+++|++.+. +++++|.|+|+++||.++ ..|++.+.
T Consensus 98 g~G~~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~----~~Ga~~~~ 149 (268)
T 3t68_A 98 GRGAADMKGSLACMIVAVERFIAEHP--DHQGSIGFLITSDEEGPF----INGTVRVV 149 (268)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCTTSSS----CCHHHHHH
T ss_pred ecCcccchHHHHHHHHHHHHHHHhCC--CCCCcEEEEEEeCCccCc----ccCHHHHH
Confidence 678999999999999999998875 788999999999999852 24898875
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.88 E-value=2.3e-21 Score=179.78 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcc---cCcEEEEecCCCCCCCeEEEeeccccccCC--------------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~---~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~-------------------- 57 (408)
+|++|.++++||.++|+++||+++... .+|+++++ |. ++|+|+|++|+||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~ 97 (269)
T 4h2k_A 21 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 97 (269)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEe-CC--CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEE
Confidence 477889999999999999999987653 35899988 54 35899999999999863
Q ss_pred --CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHh
Q 015341 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (408)
Q Consensus 58 --G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~ 113 (408)
|+.|||++++++|.|++.|++.+. +++++|.|+|+++||.+. ..|++.+.
T Consensus 98 grG~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~----~~Ga~~~~ 149 (269)
T 4h2k_A 98 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEATA----KDGTIHVV 149 (269)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----TTSHHHHH
T ss_pred eCCcccChHHHHHHHHHHHHHHHhCC--CCCccEEEEEEeccccCc----ccCHHHHH
Confidence 678999999999999999998875 788999999999999852 24998875
No 30
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.76 E-value=6.6e-22 Score=188.42 Aligned_cols=308 Identities=17% Similarity=0.129 Sum_probs=158.4
Q ss_pred CCHHHH-HHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccCC------------CCCCChHHHH
Q 015341 1 MSPASV-RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------GIFDGSLGII 67 (408)
Q Consensus 1 ~s~~E~-~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------G~~D~k~~ia 67 (408)
+|++|. ++++||+++|+++|+++++|+.|||+|+++|+ +|+|+|.|||||||.. ++.+++.+.+
T Consensus 24 ~sg~E~~~v~~~l~~~l~~~G~~v~~D~~GNlia~~~g~---~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~~~~~ 100 (354)
T 2wzn_A 24 VSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPET 100 (354)
T ss_dssp BTTCGGGTHHHHHHHHHHTTSSEEEECTTCCEEEEECCS---SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGG
T ss_pred CCcchHHHHHHHHHHHHHHcCCEEEEeCCCeEEEEECCC---CceEEEEeccccCCCcCCeeecCCceeeccCCCccHHH
Confidence 367664 68999999999999999999999999999653 4899999999999853 1112222222
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhccCCccccccccCCCCcHHHHHHhCCCCcchhhh
Q 015341 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESL 147 (408)
Q Consensus 68 ~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 147 (408)
+...++..+...+ .+...+.++++.+||.+. .|++.+... .. ..+ .|....
T Consensus 101 ~~~~~~~~~~~~~---~~~~~~~~~~~~~ee~~~-----~~~~~~~~~----~~-~~~-~g~~~~--------------- 151 (354)
T 2wzn_A 101 LVAQRIRFFTEKG---ERYGVVGVLPPHLRRGQE-----DKGSKIDWD----QI-VVD-VGASSK--------------- 151 (354)
T ss_dssp GTTCEEEEEETTE---EEEEEECCCCGGGC--------------CCGG----GC-CEE-CSCSSH---------------
T ss_pred HHHHHHHHhhccC---CccceEEEeeeeeEeccc-----ccccchhhh----hh-hhh-hcccch---------------
Confidence 2233333344444 456778888899998742 455443210 00 000 000000
Q ss_pred hhccCCCCCceeeEEeeccCCcccccCCCcceeEEeeeeceeEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 015341 148 LQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLC 227 (408)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~Hs~~~p~~~g~nai~~~~~~i~~l~~~~ 227 (408)
......++..+..+......++.+...|++. + .++...+..++..++++.
T Consensus 152 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~l~ 201 (354)
T 2wzn_A 152 -------------------------EEAEEMGFRVGTVGEFAPNFTRLNEHRFATP-Y----LDDRICLYAMIEAARQLG 201 (354)
T ss_dssp -------------------------HHHHHTTCCTTCEEEECCCCEECSSSEEECT-T----HHHHHHHHHHHHHHHHCC
T ss_pred -------------------------hhhhccccccceeeeeeeeeEeecccccccc-c----ccccchhhhHHHHHHHHH
Confidence 0000011111233444555667777777654 4 456666666666666553
Q ss_pred cCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCC
Q 015341 228 KHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 307 (408)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~ 307 (408)
...... ......+..++...+ +...|.++..+....+.+......... ... .....
T Consensus 202 ~~~~~~-------------~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----~~~~~ 257 (354)
T 2wzn_A 202 DHEADI-------------YIVGSVQEEVGLRGA-RVASYAINPEVGIAMDVTFAKQPHDKG------KIV----PELGK 257 (354)
T ss_dssp CCSSEE-------------EEEEESCGGGTSHHH-HHHHHHHCCSEEEEEEEEECCCTTSTT------CCC----CCTTS
T ss_pred hccccc-------------cccccceeeeeeecc-cccccccccccceeeeeeeccccchhh------hhh----eeecc
Confidence 321000 000000000011111 235666666676666666554321100 000 00010
Q ss_pred eEEEEEeecCCCccCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhh--h-cCeeEEEEecCCCCCCCC
Q 015341 308 SCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH--L-TKVGMLFVRCRGGISHSP 384 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~--~-~p~~~~~~g~~~~~~H~~ 384 (408)
..... .....++............ .+ .+.+.....++|+||++++.. . +|++.++ ++...+|++
T Consensus 258 ~~~~~-----~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~ggTDa~~~~~~~~Giptv~~G--~g~~~~Ht~ 324 (354)
T 2wzn_A 258 GPVMD-----VGPNINPKLRAFADEVAKK-YE-----IPLQVEPSPRPTGTDANVMQINKEGVATAVLS--IPIRYMHSQ 324 (354)
T ss_dssp CCEEE-----ESTTSCHHHHHHHHHHHHH-TT-----CCCEEEECCSCCSSHHHHHHTSTTCCEEEEEE--EEEBSTTST
T ss_pred ccccc-----cccccCcchhhhhHHHHHH-hc-----CCCceEEEecccccHHHHHHHhcCCCCEEEEC--cccCCCCcc
Confidence 11111 1112233322222222211 11 222333334568999998742 3 6877643 334458999
Q ss_pred CCCCChhhHHHHHHHHHHHHHhh
Q 015341 385 AEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 385 ~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
||+++++++.+++++|..+|++|
T Consensus 325 ~E~v~i~dl~~~~~ll~~~i~~L 347 (354)
T 2wzn_A 325 VELADARDVDNTIKLAKALLEEL 347 (354)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHC
T ss_pred cEEEEHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999986
No 31
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.74 E-value=1.3e-16 Score=154.79 Aligned_cols=102 Identities=22% Similarity=0.315 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccC------------------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD------------------------ 56 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~------------------------ 56 (408)
+|+.|.++++||.++|+++|++++.+..+|++|.++|+. +.|+|+|.+|||+||.
T Consensus 22 ~sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~ 100 (373)
T 1vhe_A 22 IPGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAE-NGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVM 100 (373)
T ss_dssp CTTCCHHHHHHHHHHHGGGCSEEEECTTCCEEEEEESST-TSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGT
T ss_pred CCCchHHHHHHHHHHHHhhCCEEEEcCCCcEEEEecCCC-CCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhc
Confidence 477899999999999999999999888899999987753 3589999999999981
Q ss_pred --------------------------------------------C--------------C--------------------
Q 015341 57 --------------------------------------------A--------------G-------------------- 58 (408)
Q Consensus 57 --------------------------------------------~--------------G-------------------- 58 (408)
+ |
T Consensus 101 ~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~g 180 (373)
T 1vhe_A 101 LAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLA 180 (373)
T ss_dssp TTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEE
T ss_pred cCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEe
Confidence 0 1
Q ss_pred -CCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHH
Q 015341 59 -IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (408)
Q Consensus 59 -~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l 112 (408)
+.|||++++++|.|++.|++.+ ++++|.|+|+++||.+ ..|++.+
T Consensus 181 r~~D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~G-----~~G~~~~ 226 (373)
T 1vhe_A 181 KAWDNRIGCAIAIDVLRNLQNTD----HPNIVYGVGTVQEEVG-----LRGAKTA 226 (373)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTSC----CSSEEEEEEESCCTTT-----SHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHHhhcC----CCceEEEEEECCcccC-----hhhHHHH
Confidence 5799999999999999999864 5799999999999984 4677765
No 32
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.74 E-value=9.9e-18 Score=160.61 Aligned_cols=101 Identities=25% Similarity=0.278 Sum_probs=81.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccC----------------C-------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~----------------~------- 57 (408)
.|++|.++++||.++|+++|++++.++.+|+++.++|.. +.|+|+|.+|+|+||. +
T Consensus 13 ~sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~ 91 (340)
T 2fvg_A 13 VSGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGRD-SSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRIL 91 (340)
T ss_dssp BTTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGC
T ss_pred CCCchHHHHHHHHHHHHhhCCEEEEeCCCcEEEEecCCC-CCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCcccccc
Confidence 367899999999999999999999888899999987642 3489999999999982 1
Q ss_pred -----------------------------------------------------C-------------------CCCChHH
Q 015341 58 -----------------------------------------------------G-------------------IFDGSLG 65 (408)
Q Consensus 58 -----------------------------------------------------G-------------------~~D~k~~ 65 (408)
| +.|||++
T Consensus 92 ~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g 171 (340)
T 2fvg_A 92 PGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAG 171 (340)
T ss_dssp TTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHH
T ss_pred cCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHH
Confidence 2 3799999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHh
Q 015341 66 IITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (408)
Q Consensus 66 ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~ 113 (408)
++++|.|++.|+ +++++|.|+|+++||.+ ..|++.+.
T Consensus 172 ~a~~l~a~~~l~------~~~~~i~~~~~~~EE~G-----~~G~~~~~ 208 (340)
T 2fvg_A 172 CSVLIDVLESGV------SPAYDTYFVFTVQEETG-----LRGSAVVV 208 (340)
T ss_dssp HHHHHHHHHTCC------CCSEEEEEEEECCCC----------CHHHH
T ss_pred HHHHHHHHHHhh------ccCCcEEEEEEcccccc-----hhhhHHHh
Confidence 999999999876 26789999999999984 46887664
No 33
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.73 E-value=2.5e-17 Score=145.44 Aligned_cols=105 Identities=21% Similarity=0.160 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHcCcEEEEcc----cCcEEEEecCCCCCCCeEEEeeccccccCC----------------------
Q 015341 4 ASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (408)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~~~~~~----~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~---------------------- 57 (408)
+|.++++||.++|+++|++++.+. ..|++++++|++++.|+|+|++|+||||.+
T Consensus 30 ~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~Gr 109 (198)
T 1q7l_A 30 DYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYAR 109 (198)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECT
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeC
Confidence 689999999999999999987654 248999998765445899999999999862
Q ss_pred CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhc
Q 015341 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (408)
Q Consensus 58 G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~ 114 (408)
|+.|||++++++|.|+++|++++. +++++|.|+|+++||.+ +..|++.++.
T Consensus 110 Ga~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g----~~~Ga~~~~~ 160 (198)
T 1q7l_A 110 GAQDMKCVSIQYLEAVRRLKVEGH--RFPRTIHMTFVPDEEVG----GHQGMELFVQ 160 (198)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHTTC--CCSSCEEEEEESCGGGT----STTTHHHHTT
T ss_pred cchhchHHHHHHHHHHHHHHHcCC--CCCCCEEEEEEcccccC----ccccHHHHHH
Confidence 458999999999999999999986 78999999999999985 2478988763
No 34
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.69 E-value=2.2e-16 Score=150.73 Aligned_cols=100 Identities=25% Similarity=0.257 Sum_probs=85.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeecccccc----------------CCC------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DAG------ 58 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp----------------~~G------ 58 (408)
.|+.|.++++||.++|+++|+ ++.++.+|+++.++| + .|+|+|.+|+|+|+ .+|
T Consensus 17 ~sg~e~~~~~~l~~~l~~~g~-~~~d~~gnlia~~~~-~--~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~ 92 (332)
T 2wyr_A 17 ISGYEERIREEIIREIKDFAD-YKVDAIGNLIVELGE-G--EERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLL 92 (332)
T ss_dssp BTTCCHHHHHHHHHHHTTTCC-CEECTTCCEEEEEES-S--SEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGT
T ss_pred CCCcHHHHHHHHHHHHhhcCc-EEEcCCCeEEEEecC-C--CceEEEEeccCcccEEEEEECCCCeEEEEecCCcChhhc
Confidence 367899999999999999999 888888999999876 2 48999999999994 222
Q ss_pred ------------------------------------------------------------------------------CC
Q 015341 59 ------------------------------------------------------------------------------IF 60 (408)
Q Consensus 59 ------------------------------------------------------------------------------~~ 60 (408)
+.
T Consensus 93 ~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~~~~~~~i~gra~ 172 (332)
T 2wyr_A 93 YGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYVSTRGL 172 (332)
T ss_dssp TTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCEEETTTEEECTTH
T ss_pred cCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccEEecCCeEEcccC
Confidence 37
Q ss_pred CChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHh
Q 015341 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (408)
Q Consensus 61 D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~ 113 (408)
|||++++++|.|++.|++.+ ++++|.|+|+++||.+ ..|++.+.
T Consensus 173 D~k~g~a~~l~a~~~l~~~~----~~~~i~~~~~~~EE~G-----~~G~~~~~ 216 (332)
T 2wyr_A 173 DDRFGVVALIEAIKDLVDHE----LEGKVIFAFTVQEEVG-----LKGAKFLA 216 (332)
T ss_dssp HHHHHHHHHHHHHHTTTTSC----CSSEEEEEEESCGGGT-----SHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHhhcC----CCceEEEEEECccccC-----cchHHHHh
Confidence 99999999999999998774 5799999999999984 46777653
No 35
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.67 E-value=1.7e-15 Score=145.72 Aligned_cols=79 Identities=27% Similarity=0.281 Sum_probs=58.1
Q ss_pred ccCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHh--hhh-cCeeEEEEecCCCCCCCCCCCCChhhHHHH
Q 015341 320 VMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAM--SHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 396 (408)
Q Consensus 320 ~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~--~~~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~ 396 (408)
...++++.+.+++++++. |. +.... ..++++||++.+ +.. +|++.++.|. ...|+++|+++++++..+
T Consensus 267 ~~~~~~l~~~l~~~a~~~-gi-----~~~~~-~~~~ggsDa~~~~~~~~GiPtv~lg~~~--~~~Hs~~E~v~~~dl~~~ 337 (353)
T 1y0y_A 267 VICHPTIVRWLEELAKKH-EI-----PYQLE-ILLGGGTDAGAIHLTKAGVPTGALSVPA--RYIHSNTEVVDERDVDAT 337 (353)
T ss_dssp EECCHHHHHHHHHHHHHT-TC-----CEEEE-ECSSCCCTHHHHTTSTTCCCEEEEEEEE--BSCSSSCEEEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHc-CC-----CEEEe-ecCCCCchHHHHHHhCCCCcEEEEcccc--cccCCHHHhcCHHHHHHH
Confidence 445788888888887764 32 12221 124578999999 443 7888754443 458999999999999999
Q ss_pred HHHHHHHHHhh
Q 015341 397 GLAVLAFLETH 407 (408)
Q Consensus 397 ~~~~~~~l~~l 407 (408)
++++..++.++
T Consensus 338 ~~ll~~~l~~l 348 (353)
T 1y0y_A 338 VELMTKALENI 348 (353)
T ss_dssp HHHHHHHHHHG
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 36
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.64 E-value=2.8e-15 Score=144.05 Aligned_cols=96 Identities=22% Similarity=0.273 Sum_probs=81.2
Q ss_pred CHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeecccccc----------------CC--------
Q 015341 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA-------- 57 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp----------------~~-------- 57 (408)
|++|.++++|+.++|+++|++++++..+|++++++|.. +.|+|+|++|+|||+ .+
T Consensus 22 s~~e~~~~~~l~~~l~~~g~~~~~d~~gnl~a~~~g~~-~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 100 (349)
T 2gre_A 22 SGNTAKIINFIENYVSEWNVETKRNNKGALILTVKGKN-DAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVE 100 (349)
T ss_dssp TTCCHHHHHHHHHHTTTSSSEEEECSSSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTT
T ss_pred CccHHHHHHHHHHHHHHhCCEEEEecCCcEEEEecCCC-CCceEEEEecccccceeEEEECCCCeEEEEecCCCcccccc
Confidence 67789999999999999999998888899999997653 248999999999993 10
Q ss_pred ----------C---------------------------------------------------------------------
Q 015341 58 ----------G--------------------------------------------------------------------- 58 (408)
Q Consensus 58 ----------G--------------------------------------------------------------------- 58 (408)
|
T Consensus 101 ~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i 180 (349)
T 2gre_A 101 GEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI 180 (349)
T ss_dssp TCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEE
T ss_pred CcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeE
Confidence 0
Q ss_pred ---CCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccccc
Q 015341 59 ---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (408)
Q Consensus 59 ---~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~ 100 (408)
+.|||++++++|.|++.|++.+. +++++|.|+|+++||.+
T Consensus 181 ~gr~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~G 223 (349)
T 2gre_A 181 KSRHLDDKVSVAILLKLIKRLQDENV--TLPYTTHFLISNNEEIG 223 (349)
T ss_dssp EESCCTTHHHHHHHHHHHHHHHHHTC--CCSEEEEEEEESCC---
T ss_pred EEeeccchHHHHHHHHHHHHHHhccC--CCCceEEEEEECcccCC
Confidence 38999999999999999998876 78899999999999984
No 37
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.64 E-value=4.7e-16 Score=145.10 Aligned_cols=104 Identities=20% Similarity=0.322 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHHcCcEEEEccc-------CcEEEEecCCCCCCCeEEEeeccccccCC-CCCCChHHHHHHHHHHH
Q 015341 3 PASVRAGNLIRQWMEDAGLRTWVDHL-------GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISALK 74 (408)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~~~~~~~-------~nvia~~~g~~~~~~~i~l~~H~D~Vp~~-G~~D~k~~ia~~l~a~~ 74 (408)
.+|.++++||.++|+++|++++.+.. .||+++++|.++ .++|+|.+|+|+||.+ |+.|||++++++|.+++
T Consensus 32 ~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~-~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~ 110 (284)
T 1tkj_A 32 PGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDP-NKVLMAGAHLDSVSSGAGINDNGSGSAAVLETAL 110 (284)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEE-EEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCC-CCEEEEEeecCCCCCCCCCccChHHHHHHHHHHH
Confidence 48999999999999999999877644 489999987532 4899999999999987 89999999999999999
Q ss_pred HHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhc
Q 015341 75 VLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (408)
Q Consensus 75 ~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~ 114 (408)
.|++.+. +++++|.|+|+++||. |+.||+.+++
T Consensus 111 ~l~~~~~--~~~~~i~~~~~~~EE~-----g~~Gs~~~~~ 143 (284)
T 1tkj_A 111 AVSRAGY--QPDKHLRFAWWGAEEL-----GLIGSKFYVN 143 (284)
T ss_dssp HHHHTTC--CCSEEEEEEEESCGGG-----TSHHHHHHHH
T ss_pred HHHhcCC--CCCceEEEEEECCccc-----CCcCHHHHHh
Confidence 9999886 7899999999999998 4589998864
No 38
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.63 E-value=1.4e-14 Score=139.11 Aligned_cols=94 Identities=19% Similarity=0.115 Sum_probs=80.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccC---------------C--------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD---------------A-------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~---------------~-------- 57 (408)
.|++|.++++||.++|+++|++++.+..+|+++.++|.+ .|.|+|.+|+|||+. +
T Consensus 20 ~sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~--~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~ 97 (346)
T 1vho_A 20 PSGYETNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKG--IGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVY 97 (346)
T ss_dssp BTTCCHHHHHHHHHHHGGGCSEEEECTTSCEEEEECCSS--SCEEEEEEECCBCCEEEEEEETTEEEEEEC--------C
T ss_pred CCcchHHHHHHHHHHHHhhCCEEEEecCCcEEEEEcCCC--CceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccc
Confidence 367899999999999999999999888899999987752 489999999999941 1
Q ss_pred --------------C---------------------------------------------------------CCCChHHH
Q 015341 58 --------------G---------------------------------------------------------IFDGSLGI 66 (408)
Q Consensus 58 --------------G---------------------------------------------------------~~D~k~~i 66 (408)
| +.|+|.++
T Consensus 98 g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~ 177 (346)
T 1vho_A 98 ASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASC 177 (346)
T ss_dssp CCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHH
T ss_pred cCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHH
Confidence 0 26889999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCEEEEEecccccc
Q 015341 67 ITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (408)
Q Consensus 67 a~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~ 100 (408)
++++.+++.+++. .+++++.++|+.+||.+
T Consensus 178 aa~l~al~~l~~~----~~~~~~~~~~t~~EEvG 207 (346)
T 1vho_A 178 GVLVKVLEFLKRY----DHPWDVYVVFSVQEETG 207 (346)
T ss_dssp HHHHHHHHHHTTC----CCSSEEEEEEECTTSSS
T ss_pred HHHHHHHHHhhhc----CCCceEEEEEECCcccc
Confidence 9999999999875 35689999999999984
No 39
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.60 E-value=1.9e-14 Score=138.25 Aligned_cols=101 Identities=22% Similarity=0.275 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeecccccc----------------CC-------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp----------------~~------- 57 (408)
.|++|.++++||.++|+++|++++.+..+|+++.++|. +.|+|+|.+|+|||+ .+
T Consensus 18 ~sg~e~~~~~~l~~~l~~~g~~v~~d~~gnlia~~~g~--~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~ 95 (348)
T 1ylo_A 18 IASSEQEVRQILLEEAARLQKEVRFDGLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAAR 95 (348)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCCEEECTTCCEEEECCCC--SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGS
T ss_pred CCCchHHHHHHHHHHHHhhCCEEEEecCCCEEEEecCC--CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhc
Confidence 36789999999999999999999888889999998765 358999999999995 10
Q ss_pred --------------------------------------------------C--------------------CCCChHHHH
Q 015341 58 --------------------------------------------------G--------------------IFDGSLGII 67 (408)
Q Consensus 58 --------------------------------------------------G--------------------~~D~k~~ia 67 (408)
| +.|||.+++
T Consensus 96 ~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~a 175 (348)
T 1ylo_A 96 QLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCY 175 (348)
T ss_dssp SSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHH
T ss_pred cCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHH
Confidence 0 268999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHH
Q 015341 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (408)
Q Consensus 68 ~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l 112 (408)
+++.+++.+++. .++.++.++|+.+||.+ ..|++..
T Consensus 176 a~l~al~~l~~~----~~~~~~~~~~t~~EEvG-----~~Ga~~~ 211 (348)
T 1ylo_A 176 LLVTLLRELHDA----ELPAEVWLVASSSEEVG-----LRGGQTA 211 (348)
T ss_dssp HHHHHHHHHTTC----CCSSEEEEEEESCCTTS-----SHHHHHH
T ss_pred HHHHHHHHhhhc----CCCceEEEEEEcccccc-----hhHHHHh
Confidence 999999998765 36789999999999984 3566543
No 40
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.57 E-value=4.7e-15 Score=139.36 Aligned_cols=105 Identities=26% Similarity=0.376 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHHHHHcC--cE-EEEcc-------cCcEEEEecCCCCCCCeEEEeecccccc---------CCCCCCC
Q 015341 2 SPASVRAGNLIRQWMEDAG--LR-TWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV---------DAGIFDG 62 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G--~~-~~~~~-------~~nvia~~~g~~~~~~~i~l~~H~D~Vp---------~~G~~D~ 62 (408)
|+.|.++++||.++|+++| ++ ++.+. .+||+++++|+++..++|+|.+|+|+|| ..|+.||
T Consensus 39 s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~ 118 (299)
T 1rtq_A 39 TTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDD 118 (299)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTT
T ss_pred CchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccccCCCcCcCCCcccCCCccc
Confidence 6789999999999999987 33 33332 2689999987642247899999999998 4588899
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHh
Q 015341 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (408)
Q Consensus 63 k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~ 113 (408)
|++++++|.+++.|++.++ +++++|.|+|+++||. |+.||+.++
T Consensus 119 ~~g~a~~l~~~~~l~~~~~--~~~~~i~~~~~~~EE~-----g~~Gs~~~~ 162 (299)
T 1rtq_A 119 ASGIAAVTEVIRVLSENNF--QPKRSIAFMAYAAEEV-----GLRGSQDLA 162 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG-----TSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--CCCceEEEEEECCccC-----CchhHHHHH
Confidence 9999999999999999886 7899999999999998 458999876
No 41
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.53 E-value=4.8e-14 Score=132.55 Aligned_cols=107 Identities=19% Similarity=0.250 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHHHHHcCcEEEEcc------------cCcEEEEecCCCCCCCeEEEeeccccccCC------------
Q 015341 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~~~~~------------~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------ 57 (408)
|..+.++++||.++|+++|++++.+. .+|||++++|.. .+.|+|.+|+|+||.+
T Consensus 44 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 121 (309)
T 3tc8_A 44 TAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPEN--SKRVLLFAHWDSRPYSDHDPDPSKHRTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCC--CceEEEEecccCCCCCCCCccccCCCcc
Confidence 67899999999999999999987653 259999998853 5899999999999865
Q ss_pred --CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccc--------cCCCCcchHHHhc
Q 015341 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR--------FQSTFLGSAALAG 114 (408)
Q Consensus 58 --G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~--------~~~~~~Gs~~l~~ 114 (408)
|+.|+++++|++|++++.|++. +++++|.|++..+||.+. .++.+.||+++.+
T Consensus 122 ~~Ga~D~~sGva~~Le~ar~l~~~----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~ 184 (309)
T 3tc8_A 122 LDGADDGGSGVGALLEIARQIGQK----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAK 184 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHH
T ss_pred ccCcccchHhHHHHHHHHHHHHhC----CCCCcEEEEEECccccccccccccccccccchhHHHHHh
Confidence 8899999999999999999987 478999999999999831 0000289998864
No 42
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.53 E-value=2e-13 Score=130.58 Aligned_cols=103 Identities=19% Similarity=0.206 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccccCC-----------------------
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------- 57 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~----------------------- 57 (408)
+|+.|.++++||+++|+++|+++++++.||++++++|.++++|+|+|.||||+|+.-
T Consensus 18 ~SG~E~~v~~~l~~~l~~~g~~~~~D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~ 97 (355)
T 3kl9_A 18 VSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVV 97 (355)
T ss_dssp BTTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTC
T ss_pred CCCCHHHHHHHHHHHHHHhCCEEEECCCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCCEEEEEecCCcccccc
Confidence 478999999999999999999999999999999998764235899999999999310
Q ss_pred --------------------------------------------------------------------------------
Q 015341 58 -------------------------------------------------------------------------------- 57 (408)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (408)
T Consensus 98 ~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~ 177 (355)
T 3kl9_A 98 SSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNII 177 (355)
T ss_dssp SSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEE
T ss_pred CCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEE
Confidence
Q ss_pred -CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHH
Q 015341 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (408)
Q Consensus 58 -G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l 112 (408)
..+|++.++++++.+++.+++. +++.+++++|+..||.| ..|+...
T Consensus 178 s~~lDnr~g~~~~l~~l~~l~~~----~~~~~v~~~ft~qEEvG-----~~Ga~~a 224 (355)
T 3kl9_A 178 SKAWDNRYGVLMVSELAEALSGQ----KLGNELYLGSNVQEEVG-----LRGAHTS 224 (355)
T ss_dssp ESCHHHHHHHHHHHHHHHHHSSC----CCSSEEEEEEESCCTTT-----SHHHHHH
T ss_pred eeccccHHHHHHHHHHHHHhhhc----CCCceEEEEEECccccC-----cchhHHH
Confidence 1248999999999999998865 47899999999999984 4566543
No 43
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.53 E-value=4.2e-14 Score=133.02 Aligned_cols=107 Identities=19% Similarity=0.272 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHHHHHHHcCcEEEEccc------------CcEEEEecCCCCCCCeEEEeeccccccCC------------
Q 015341 2 SPASVRAGNLIRQWMEDAGLRTWVDHL------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~~~~~~------------~nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------ 57 (408)
|..|.++++||.++|+++|++++++.. +|||++++|.. .+.|+|.+|+|+||.+
T Consensus 46 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 123 (314)
T 3gux_A 46 TQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPES--KKRILLCAHWDSRPYADNDPDPKNHHTP 123 (314)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCC--------------
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCC--CceEEEEccccCCCcCCCCcccccCCcc
Confidence 678999999999999999999876542 58999998753 5899999999999864
Q ss_pred --CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccc---------cCCCCcchHHHhc
Q 015341 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR---------FQSTFLGSAALAG 114 (408)
Q Consensus 58 --G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~---------~~~~~~Gs~~l~~ 114 (408)
|+.|+++++|++|++++.|++. +++++|.|++.++||.+. .++.+.||+++.+
T Consensus 124 ~~GA~D~~sGva~~Le~ar~l~~~----~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~ 187 (314)
T 3gux_A 124 ILGVNDGASGVGVLLEIARQIQKE----QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWAR 187 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHH
T ss_pred cCCCcccHHHHHHHHHHHHHHHhC----CCCCcEEEEEECCccccccccccccccccccchhHHHHHh
Confidence 8899999999999999999987 478999999999999831 0001179988864
No 44
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.45 E-value=2.4e-13 Score=129.26 Aligned_cols=109 Identities=23% Similarity=0.295 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHHHHHH--cCcEEEEcc-----------cCcEEEEecCCCCCCCeEEEeeccccccCC--------CCC
Q 015341 2 SPASVRAGNLIRQWMED--AGLRTWVDH-----------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------GIF 60 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~--~G~~~~~~~-----------~~nvia~~~g~~~~~~~i~l~~H~D~Vp~~--------G~~ 60 (408)
|+.+.++++||.++|++ +|++++.+. .+|||++++|. +.+.|++.+|+|+||.+ |+.
T Consensus 49 s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~--~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~ 126 (329)
T 2afw_A 49 SPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGAT 126 (329)
T ss_dssp SHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTT--SSEEEEEEEECCCCCCCCBTTBCCCCTT
T ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCC--CCcEEEEEEeccCCCcCcccCcCCCCcc
Confidence 45677899999999999 999987653 35899999875 35899999999999975 889
Q ss_pred CChHHHHHHHHHHHHHHhc--------CCCCCCCCCEEEEEeccccccccCC---CCcchHHHhc
Q 015341 61 DGSLGIITAISALKVLKST--------GKLGKLKRPVEVIAFSDEEGVRFQS---TFLGSAALAG 114 (408)
Q Consensus 61 D~k~~ia~~l~a~~~l~~~--------~~~~~~~~~i~~i~~~~EE~~~~~~---~~~Gs~~l~~ 114 (408)
|+++++|++|++++.|++. |+ +++++|.|++..+||..++-. |+.||+++++
T Consensus 127 D~~sGva~~le~ar~l~~~~~~~~~~~g~--~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~ 189 (329)
T 2afw_A 127 DSAVPCAMMLELARALDKKLLSLKTVSDS--KPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAA 189 (329)
T ss_dssp TTHHHHHHHHHHHHHTHHHHHTTC--------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHhhhcccccC--CCCccEEEEEecCcccccccCCCccchhHHHHHH
Confidence 9999999999999999876 34 688999999999999722100 3679998863
No 45
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.43 E-value=1.7e-13 Score=129.91 Aligned_cols=93 Identities=19% Similarity=0.086 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcc-------cCcEEEEecCCCCCCCeEEEeecccccc-----------CCC----
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV-----------DAG---- 58 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~-------~~nvia~~~g~~~~~~~i~l~~H~D~Vp-----------~~G---- 58 (408)
.|++|.++++||.++|+++|++++.+. .+|+++.++| + |+|+|.+|||||+ .+|
T Consensus 32 ~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g---~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~ 107 (321)
T 3cpx_A 32 PSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG---N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAK 107 (321)
T ss_dssp BTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES---S-CSEEEEEECCBCEEEECSTTBEEEESSCCCC
T ss_pred CCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC---C-ceEEEEecCCcCCeEecccCCeEEcCChhhc
Confidence 378899999999999999999887777 7899999865 3 7899999999993 211
Q ss_pred -------------------------------------------------------CCCChHHHHHHHHHHHHHHhcCCCC
Q 015341 59 -------------------------------------------------------IFDGSLGIITAISALKVLKSTGKLG 83 (408)
Q Consensus 59 -------------------------------------------------------~~D~k~~ia~~l~a~~~l~~~~~~~ 83 (408)
+.|||+++++++.+++.+
T Consensus 108 ~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l------- 180 (321)
T 3cpx_A 108 EGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTL------- 180 (321)
T ss_dssp TTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTC-------
T ss_pred ccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHh-------
Confidence 379999999888877642
Q ss_pred CCCCCEEEEEeccccccccCCCCcchHHH
Q 015341 84 KLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (408)
Q Consensus 84 ~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l 112 (408)
+ + +.++|+.+||.+ ..|++..
T Consensus 181 ~-~--i~~~~t~~EEvG-----~~Ga~~a 201 (321)
T 3cpx_A 181 E-H--GIIAFTCWEEHG-----GGSVAYL 201 (321)
T ss_dssp C-S--EEEEEESSTTTT-----CCSHHHH
T ss_pred c-C--cEEEEECCccCc-----hhcchhh
Confidence 2 2 999999999984 4677754
No 46
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.32 E-value=4.6e-12 Score=119.65 Aligned_cols=109 Identities=18% Similarity=0.305 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHHHHc--CcEEEEccc-----------CcEEEEecCCCCCCCeEEEeeccccccC-------CCCCC
Q 015341 2 SPASVRAGNLIRQWMEDA--GLRTWVDHL-----------GNVHGRVEGLNASAQALLIGSHLDTVVD-------AGIFD 61 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~--G~~~~~~~~-----------~nvia~~~g~~~~~~~i~l~~H~D~Vp~-------~G~~D 61 (408)
|..++++++||.++|+++ |++++.+.. +|||++++|+. .+.|++.+|+|+|+. .|+.|
T Consensus 57 S~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~--~~~ivl~aH~Dsv~~~~g~~~~~GA~D 134 (330)
T 3pb6_X 57 SPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRA--ARHLTLACHYDSKLFPPGSTPFVGATD 134 (330)
T ss_dssp SHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTS--SEEEEEEEECCCCCCCTTSCCCCCTTT
T ss_pred CHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCC--CceEEEEeccCCCCCCCCCcCcCCCcC
Confidence 678899999999999999 888876643 59999998764 489999999999973 38889
Q ss_pred ChHHHHHHHHHHHHHHhc-----CCCCCCCCCEEEEEeccccccc---cCCCCcchHHHhc
Q 015341 62 GSLGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVR---FQSTFLGSAALAG 114 (408)
Q Consensus 62 ~k~~ia~~l~a~~~l~~~-----~~~~~~~~~i~~i~~~~EE~~~---~~~~~~Gs~~l~~ 114 (408)
+.+++|++|++++.|++. +. +++++|.|+|..+||... ...++.||+++++
T Consensus 135 ~asGva~lLe~ar~l~~~~~~~~~~--~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~ 193 (330)
T 3pb6_X 135 SAVPCALLLELAQALDLELSRAKKQ--AAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQ 193 (330)
T ss_dssp THHHHHHHHHHHHHTHHHHHHHHHT--TCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHhhcccC--CCCCcEEEEEEcCcccccccCCCCCCccHHHHHH
Confidence 999999999999999873 23 689999999999999710 0003689998863
No 47
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.22 E-value=8.7e-11 Score=110.61 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=80.8
Q ss_pred CHHHHHHHHHHHHHHHHcCcEEEEccc------------CcEEEEecCCCCCCCeEEEeeccccccCC------------
Q 015341 2 SPASVRAGNLIRQWMEDAGLRTWVDHL------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~~~~~~------------~nvia~~~g~~~~~~~i~l~~H~D~Vp~~------------ 57 (408)
|....++.+||.+.|+++|++++.+.. .|||++++|.. .+.|+|.+|+|++|.+
T Consensus 44 S~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~--~~~i~l~aH~Ds~~~~~~~~~~~~~~~~ 121 (309)
T 4fuu_A 44 TKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPES--KKRIALFAHWDTRPWADNDADEKNHHTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCC--CceEEEEeecCCCCCCCCccccccccCC
Confidence 567889999999999999999865422 38999998864 4899999999999753
Q ss_pred --CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccccc
Q 015341 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (408)
Q Consensus 58 --G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~ 100 (408)
|+.|+-.++|++|++++.|++. +++++|.|+|..+||.+
T Consensus 122 ~~GA~D~aSG~a~lLE~ar~l~~~----~~~~~i~~~~~~~EE~G 162 (309)
T 4fuu_A 122 ILGANDGASGVGALLEIARLVNQQ----QPELGIDIIFLDAEDYG 162 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSSSCC
T ss_pred cCCcccCchhHHHHHHHHHHHhhc----CCCCceEEEeecccccC
Confidence 7889999999999999999986 57899999999999974
No 48
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.22 E-value=4.7e-11 Score=112.63 Aligned_cols=109 Identities=22% Similarity=0.273 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHHHHcCcEEEEccc------------CcEEEEecCCCCCCCeEEEeeccccccC------CCCCCCh
Q 015341 2 SPASVRAGNLIRQWMEDAGLRTWVDHL------------GNVHGRVEGLNASAQALLIGSHLDTVVD------AGIFDGS 63 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~~~~~~------------~nvia~~~g~~~~~~~i~l~~H~D~Vp~------~G~~D~k 63 (408)
|+..+++.+||.+.|+++|++++.+.. .||||+++|.. .+.|++.+|+|+++. .|+.|+-
T Consensus 28 s~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~--~~~vvl~aHyDs~~~~~~~~~~GA~Dna 105 (312)
T 4f9u_A 28 SRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQA--QNFLALACHYDSKYFPNDPGFVGATDSA 105 (312)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTS--SEEEEEEEECCCCCCTTCTTCCCTTTTH
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCC--CceEEEEEEEecCCCCCCCCCCCccCCc
Confidence 567889999999999999999876532 28999998863 479999999999864 3889999
Q ss_pred HHHHHHHHHHHHHHhc-----CCCCCCCCCEEEEEeccccccccC---CCCcchHHHhc
Q 015341 64 LGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAG 114 (408)
Q Consensus 64 ~~ia~~l~a~~~l~~~-----~~~~~~~~~i~~i~~~~EE~~~~~---~~~~Gs~~l~~ 114 (408)
+|+|++|++++.|.+. +. +++++|.|+|..+||.+..+ .++.||+++++
T Consensus 106 SGvA~lLElAR~l~~~~~~~~~~--~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~ 162 (312)
T 4f9u_A 106 VPCAILLNTAKTLGAYLQKEFRN--RSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAA 162 (312)
T ss_dssp HHHHHHHHHHHHTHHHHTTGGGS--CSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhccC--CCCceEEEEEecCccccccCCccccccChHHHHH
Confidence 9999999999999753 32 68899999999999975211 12679998863
No 49
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.12 E-value=2.2e-10 Score=108.69 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHHHHHcCcEEEEccc------------CcEEEEecCCCCCCCeEEEeeccccccCC-----CCCCChH
Q 015341 2 SPASVRAGNLIRQWMEDAGLRTWVDHL------------GNVHGRVEGLNASAQALLIGSHLDTVVDA-----GIFDGSL 64 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~~~~~~------------~nvia~~~g~~~~~~~i~l~~H~D~Vp~~-----G~~D~k~ 64 (408)
|+..+++.+||.+.|+++|++++.+.. .||||+++|.. .+.|++.+|+|+++.. |+.|+-.
T Consensus 55 s~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~--~~~i~l~aHyDs~~~~~~~~~GA~Dnas 132 (330)
T 4fai_A 55 TTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNA--ERYLVLSCHYDSKYMPGVEFLGATDSAV 132 (330)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTC--SEEEEEEEECCCCCCTTSCCCCTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCC--CcEEEEEEeecccccccCCCCCCCCccH
Confidence 567889999999999999999875532 28999998753 4789999999998743 8889999
Q ss_pred HHHHHHHHHHHHHhc---CCCCCCCCCEEEEEeccccccccC---CCCcchHHHhc
Q 015341 65 GIITAISALKVLKST---GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAG 114 (408)
Q Consensus 65 ~ia~~l~a~~~l~~~---~~~~~~~~~i~~i~~~~EE~~~~~---~~~~Gs~~l~~ 114 (408)
|+|++|++++.|++. +. +++++|.|+|..+||.+-.+ .++.||+++++
T Consensus 133 G~A~lLE~Ar~l~~~~~~~~--~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~ 186 (330)
T 4fai_A 133 PCAMLLNLAQVLQEQLKPLK--KSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAK 186 (330)
T ss_dssp HHHHHHHHHHHTHHHHGGGG--TSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhccC--CCCccEEEEEeccccccccccccchhhhhHHHHh
Confidence 999999999999653 33 68899999999999974100 01368888763
No 50
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.11 E-value=2e-10 Score=112.86 Aligned_cols=99 Identities=24% Similarity=0.345 Sum_probs=79.6
Q ss_pred HHHHHHHHH---HH--cCcEEEEcc-----cCcEEEEecCCCC---CCCeEEEeeccccccCC-CCCCChHHHHHHHHHH
Q 015341 8 AGNLIRQWM---ED--AGLRTWVDH-----LGNVHGRVEGLNA---SAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (408)
Q Consensus 8 ~~~~i~~~l---~~--~G~~~~~~~-----~~nvia~~~g~~~---~~~~i~l~~H~D~Vp~~-G~~D~k~~ia~~l~a~ 73 (408)
.+++|.+++ ++ .++++..+. ..||+++++|+++ ..+.|++.+|+|+|+.+ |..|++++++++|+++
T Consensus 173 ~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~ 252 (421)
T 2ek8_A 173 EGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELA 252 (421)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHH
Confidence 466787777 32 334443333 4699999998642 35899999999999987 8999999999999999
Q ss_pred HHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHhcc
Q 015341 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (408)
Q Consensus 74 ~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~~~ 115 (408)
+.|++. +++++|.|++..+||. |+.||+.+++.
T Consensus 253 ~~l~~~----~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~ 285 (421)
T 2ek8_A 253 RVMSKL----KTDTELRFITFGAEEN-----GLIGSKKYAAS 285 (421)
T ss_dssp HHHTTS----CCSSEEEEEEESSSTT-----TSHHHHHHHTT
T ss_pred HHHhcc----CCCceEEEEEECCccc-----cchhHHHHHHh
Confidence 999985 5789999999999998 46899998753
No 51
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.92 E-value=1.2e-09 Score=104.31 Aligned_cols=52 Identities=19% Similarity=0.355 Sum_probs=47.4
Q ss_pred CCHHHH-HHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeecccccc
Q 015341 1 MSPASV-RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (408)
Q Consensus 1 ~s~~E~-~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~Vp 55 (408)
+|+.|. ++++||+++|+++|+++++++.||++++++|+ +|+|+|.||||+|+
T Consensus 24 pSG~E~~~v~~~l~~~l~~~g~~~~~D~~GNvi~~~~g~---~~~v~l~aHmDtVg 76 (354)
T 2vpu_A 24 VSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIG 76 (354)
T ss_dssp BTTCGGGTHHHHHHHHHHTTCSEEEECTTCCEEEEECCS---SSEEEEECCCCBCE
T ss_pred CCcccHHHHHHHHHHHHHHhCCEEEEcCCCeEEEEEcCC---CCEEEEEecccccc
Confidence 478899 99999999999999999999999999998765 28999999999993
No 52
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.91 E-value=1.6e-09 Score=106.90 Aligned_cols=79 Identities=29% Similarity=0.439 Sum_probs=70.7
Q ss_pred CcEEEEecCCCCCCCeEEEeeccccccCC-CCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCc
Q 015341 29 GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (408)
Q Consensus 29 ~nvia~~~g~~~~~~~i~l~~H~D~Vp~~-G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~ 107 (408)
.||+++++|+.+..+.|++.+|+|+++.+ |+.|++++++++|++++.|++.++ +++++|.|++..+||. |+.
T Consensus 236 ~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~--~~~~~i~f~~~~~EE~-----gl~ 308 (444)
T 3iib_A 236 YNVIAEVKGSTKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQ--KPERTIRVVLYAAEEL-----GLL 308 (444)
T ss_dssp EEEEEEECCSTEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSS--CCSEEEEEEEESCGGG-----TSH
T ss_pred EEEEEEEeCCCCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCC--CCCCeEEEEEECCccc-----CCc
Confidence 59999999875335789999999999986 899999999999999999999886 7899999999999998 468
Q ss_pred chHHHhc
Q 015341 108 GSAALAG 114 (408)
Q Consensus 108 Gs~~l~~ 114 (408)
||+++++
T Consensus 309 Gs~~~~~ 315 (444)
T 3iib_A 309 GGKTYAK 315 (444)
T ss_dssp HHHHHHH
T ss_pred CHHHHHH
Confidence 9998764
No 53
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.76 E-value=1.1e-08 Score=96.89 Aligned_cols=51 Identities=20% Similarity=0.247 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcccCcEEEEecCCCCCCCeEEEeeccccc
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTV 54 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~~~nvia~~~g~~~~~~~i~l~~H~D~V 54 (408)
+|+.|.++.+||.++|+++|.++++|+.||+++++ |. ++|+|+|.+|||+|
T Consensus 26 pSG~E~~v~~~i~~~l~~~~~e~~~D~~Gnvi~~~-g~--~~~~v~l~aHmDev 76 (343)
T 3isx_A 26 PSGREEEVRSIILEELEGHIDGHRIDGLGNLIVWK-GS--GEKKVILDAHIDEI 76 (343)
T ss_dssp BTTCCHHHHHHHHHHHTTTCSEEEECTTCCEEEEE-CC--CSSEEEEEEECCBC
T ss_pred CCCchHHHHHHHHHHHHHhCCEEEECCCCCEEEEE-CC--CCCEEEEEeccccc
Confidence 48899999999999999999999999999999987 43 35899999999999
No 54
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.74 E-value=1.2e-08 Score=77.15 Aligned_cols=73 Identities=8% Similarity=-0.055 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhh-cCeeEEEEecCC---CCCCCCCCCCChhhHHHHHHHH
Q 015341 325 DLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRCRG---GISHSPAEHVLDDDVWAAGLAV 400 (408)
Q Consensus 325 ~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~g~~~---~~~H~~~E~i~i~~~~~~~~~~ 400 (408)
+++++++++++++ |.+ +.+..++|+||+++|... +|++ .| |++. ..+|++||+++++++.+++++|
T Consensus 2 ~~v~~l~~a~~~~-g~~-------~~~~~~~g~TDar~~~~~gip~v-~f-GPg~~~~~~~H~~dE~v~i~~l~~~~~iy 71 (88)
T 1q7l_B 2 PWWAAFSRVCKDM-NLT-------LEPEIMPAAGDNRYIRAVGVPAL-GF-SPMNRTPVLLHDHDERLHEAVFLRGVDIY 71 (88)
T ss_dssp HHHHHHHHHHHHT-TCC-------EEEEECCSCSHHHHHHHTTCCEE-EE-CCCCSCCCCTTSTTCEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHc-CCe-------eEeeeeceeCcHHHHHHcCCCEE-EE-CCCCCCcccccCCCCeeEHHHHHHHHHHH
Confidence 5788888888886 542 222335689999999876 4544 44 5543 4689999999999999999999
Q ss_pred HHHHHhh
Q 015341 401 LAFLETH 407 (408)
Q Consensus 401 ~~~l~~l 407 (408)
..++.++
T Consensus 72 ~~~i~~~ 78 (88)
T 1q7l_B 72 TRLLPAL 78 (88)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.56 E-value=1e-07 Score=98.40 Aligned_cols=79 Identities=24% Similarity=0.338 Sum_probs=68.7
Q ss_pred CcEEEEecCCCCCCCeEEEeeccccccCCCCCCChHHHHHHHHHHHHHHh---cCCCCCCCCCEEEEEeccccccccCCC
Q 015341 29 GNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKS---TGKLGKLKRPVEVIAFSDEEGVRFQST 105 (408)
Q Consensus 29 ~nvia~~~g~~~~~~~i~l~~H~D~Vp~~G~~D~k~~ia~~l~a~~~l~~---~~~~~~~~~~i~~i~~~~EE~~~~~~~ 105 (408)
.|||++++|.....+.|++.+|+|+++. |+.|+..+++++|++++.|.+ .|+ +++++|.|++..+||. |
T Consensus 313 ~NVi~~i~G~~~~~~~vllgaH~Ds~~~-Ga~D~~sG~a~lLe~ar~l~~~~~~g~--~p~r~I~f~~~~~EE~-----G 384 (707)
T 3fed_A 313 YNVVGTIRGSVEPDRYVILGGHRDSWVF-GAIDPTSGVAVLQEIARSFGKLMSKGW--RPRRTIIFASWDAEEF-----G 384 (707)
T ss_dssp EEEEEEECCSSEEEEEEEEEEECCCSSS-CTTTTHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG-----T
T ss_pred EEEEEEEeCCCCCCceEEEeccccCCCC-CCccCcHHHHHHHHHHHHHHhhhhccC--CCCCCEEEEEeCCccc-----c
Confidence 5999999987533578999999999987 468999999999999999876 577 8999999999999998 5
Q ss_pred CcchHHHhcc
Q 015341 106 FLGSAALAGI 115 (408)
Q Consensus 106 ~~Gs~~l~~~ 115 (408)
+.||+.+++.
T Consensus 385 l~GS~~~~~~ 394 (707)
T 3fed_A 385 LLGSTEWAEE 394 (707)
T ss_dssp SHHHHHHHHH
T ss_pred chhHHHHHHh
Confidence 7999988754
No 56
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.44 E-value=3.2e-07 Score=93.75 Aligned_cols=80 Identities=14% Similarity=0.229 Sum_probs=68.4
Q ss_pred CcEEEEecCCCCCCCeEEEeeccccccCCCCCCChHHHHHHHHHHHHHHhc----CCCCCCCCCEEEEEeccccccccCC
Q 015341 29 GNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST----GKLGKLKRPVEVIAFSDEEGVRFQS 104 (408)
Q Consensus 29 ~nvia~~~g~~~~~~~i~l~~H~D~Vp~~G~~D~k~~ia~~l~a~~~l~~~----~~~~~~~~~i~~i~~~~EE~~~~~~ 104 (408)
.|||++++|+....+.|++.+|+|++. .|..|+..+++++|++++.|++. |+ +++++|.|++..+||.
T Consensus 267 ~NVi~~i~G~~~~~~~vvvgaH~Ds~~-~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~--~p~r~I~f~~~~~EE~----- 338 (640)
T 3kas_A 267 LNIFGVIKGFVEPDHYVVVGAQRDAWG-PGAAKSGVGTALLLKLAQMFSDMVLKDGF--QPSRSIIFASWSAGDF----- 338 (640)
T ss_dssp EEEEEEECCSSEEEEEEEEEEECCCSS-CCTTTTHHHHHHHHHHHHHHHHHHHTSCC--CCSEEEEEEEESSGGG-----
T ss_pred EEEEEEEeCCcCCCCceeeecccCCCC-CCCCcCcHHHHHHHHHHHHHHHhhhhcCC--CCCCcEEEEEECCccc-----
Confidence 599999998732247899999999994 46889999999999999999864 76 8999999999999998
Q ss_pred CCcchHHHhccC
Q 015341 105 TFLGSAALAGIL 116 (408)
Q Consensus 105 ~~~Gs~~l~~~~ 116 (408)
|+.||+.+++..
T Consensus 339 gl~GS~~~~~~~ 350 (640)
T 3kas_A 339 GSVGATEWLEGY 350 (640)
T ss_dssp TSHHHHHHHHHT
T ss_pred CchhHHHHHHhh
Confidence 579999887543
No 57
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=96.13 E-value=0.0092 Score=56.56 Aligned_cols=78 Identities=19% Similarity=0.104 Sum_probs=58.9
Q ss_pred cCCHHHHHHHHHHHHHHHhhccCCccccccccCCc-cchHHHHhhh--h-cCeeEEEEecCCCCCCCCCCCCChhhHHHH
Q 015341 321 MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSG-AGHDAMAMSH--L-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 396 (408)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~-g~tD~~~~~~--~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~ 396 (408)
..++.+.+.+++++++. | ++.+... ..+ |+||++.+.. . +|++.++.|.. ..|+|.|++.++++..+
T Consensus 266 ~~~~~l~~~l~~~a~~~-g-----Ip~q~~~-~~g~gGtDa~~i~~a~~Gipt~~Igvp~~--~~Hs~~E~~~~~D~~~~ 336 (354)
T 2vpu_A 266 NINPKLRAFADEVAKKY-E-----IPLQVEP-SPRPTGTDANVMQINKEGVATAVLSIPIR--YMHSQVELADARDVDNT 336 (354)
T ss_dssp TSCHHHHHHHHHHHHHT-T-----CCCEEEE-CCSCCSSTHHHHHTSTTCCEEEEEEEEEB--STTSTTCEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-C-----CCcEEEe-CCCCCccHHHHHHHhcCCCCEEEECcccc--cCcCcceEeeHHHHHHH
Confidence 45778888888888764 2 3222222 234 6899988853 2 79888777765 48999999999999999
Q ss_pred HHHHHHHHHhh
Q 015341 397 GLAVLAFLETH 407 (408)
Q Consensus 397 ~~~~~~~l~~l 407 (408)
++++..++.++
T Consensus 337 ~~ll~~~l~~l 347 (354)
T 2vpu_A 337 IKLAKALLEEL 347 (354)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 58
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=95.46 E-value=0.017 Score=54.32 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=57.2
Q ss_pred cCCHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhh---hcCeeEEEEecCCCCCCCCCCCCChhhHHHHH
Q 015341 321 MCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSH---LTKVGMLFVRCRGGISHSPAEHVLDDDVWAAG 397 (408)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~~ 397 (408)
..++.+.+.+++++++. .++.+... ..+|+||++.+.. .+|++.++.|.. ..|+|.|++.++++..++
T Consensus 264 ~~d~~l~~~l~~~A~~~------gIp~Q~~v-~~ggGTDa~~i~~a~~Gipt~~Igvp~r--~~Hs~~E~~~~~Di~~~~ 334 (343)
T 3isx_A 264 ISSKRILENLIEIAEKF------DIKYQMEV-LTFGGTNAMGYQRTREGIPSATVSIPTR--YVHSPSEMIAPDDVEATV 334 (343)
T ss_dssp HHHHHHHHHHHHHHHHT------TCCCEECC-CBCCCSSHHHHHHHTSSCCEEEEEEEEB--STTSTTEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC------CCCeEEec-CCCCchHHHHHHHhcCCCCEEEEccccc--cccchhhEecHHHHHHHH
Confidence 34677888888877764 23333322 2458999987754 279998888876 489999999999999999
Q ss_pred HHHHHHHH
Q 015341 398 LAVLAFLE 405 (408)
Q Consensus 398 ~~~~~~l~ 405 (408)
+++..+++
T Consensus 335 ~ll~~~l~ 342 (343)
T 3isx_A 335 DLLIRYLG 342 (343)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99999874
No 59
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=94.79 E-value=0.082 Score=50.49 Aligned_cols=62 Identities=16% Similarity=0.136 Sum_probs=50.4
Q ss_pred ecCCCCCCCeEEEeeccccccCCCCCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccccccCCCCcchHHHh
Q 015341 35 VEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (408)
Q Consensus 35 ~~g~~~~~~~i~l~~H~D~Vp~~G~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~~~~~~~~Gs~~l~ 113 (408)
++|. +.+.|+|.+|+|. ++++-|+-+|+|+++..++.|++. +++.++.|+|.++ . .||...+
T Consensus 174 ipG~--t~~~IllsaH~cH--P~~ANDNaSG~a~lleLar~l~~~----~~~~t~rFvf~pg-~--------iGS~~yl 235 (435)
T 3k9t_A 174 IRGE--LEEEILLTTYTCH--PSMCNDNLSGVALITFIAKALSKL----KTKYSYRFLFAPE-T--------IGSITWL 235 (435)
T ss_dssp ECCS--SSCEEEEEEECCC--CSCTTTTHHHHHHHHHHHHHHTTS----CCSSEEEEEEECT-T--------HHHHHHH
T ss_pred ecCC--CCCEEEEEEEcCC--CCCCCccchHHHHHHHHHHHHhcC----CCCceEEEEEcCc-c--------HHHHHHH
Confidence 3775 3589999999996 345889999999999999999865 5789999999983 2 4898664
No 60
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=90.43 E-value=0.12 Score=50.02 Aligned_cols=77 Identities=12% Similarity=0.038 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCccccccccC--CccchHHHHhhh--h-cCeeEEEEecCCCCCCCCCCCCChhhHHHH
Q 015341 322 CDADLSSQLKSASYAALKRMTGATQHEIPVIM--SGAGHDAMAMSH--L-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 396 (408)
Q Consensus 322 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~--~~g~tD~~~~~~--~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~ 396 (408)
.+..+.+.+++++++. .++.+..... .+++||++.+.. . +|++.+ |..--..|++.|.+..+++..+
T Consensus 343 ~~~~~~~~l~~~a~~~------~Ip~Q~~~~~~d~~gGsd~g~i~~~~~Gi~tvdi--Gip~~~mHS~~E~~~~~D~~~~ 414 (428)
T 2ijz_A 343 TNSETAGFFRHLCQDS------EVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDI--GLPTFAMHSIRELAGSHDLAHL 414 (428)
T ss_dssp CCHHHHTTTTHHHHHT------CCCCCBCCCCSSCCCCCCCSTTTGGGGSCCEEEE--CCCCCSCSSSSCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHHc------CCCeEEEEEeCCCCccchHHHHHHhCCCCCEEEE--chhhcccchHHHHhhHHHHHHH
Confidence 5777887887777764 2333333221 346677766643 2 676654 4444568999999999999999
Q ss_pred HHHHHHHHHh
Q 015341 397 GLAVLAFLET 406 (408)
Q Consensus 397 ~~~~~~~l~~ 406 (408)
.+++..|+.+
T Consensus 415 ~~ll~af~~~ 424 (428)
T 2ijz_A 415 VKVLGAFYAS 424 (428)
T ss_dssp HTTHHHHTTC
T ss_pred HHHHHHHHhc
Confidence 9999988753
No 61
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=86.61 E-value=0.35 Score=47.22 Aligned_cols=76 Identities=22% Similarity=0.200 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCcccccccc----CCccchHHHHhhhh-cCeeEEEEecCCCCCCCCCCCCChhhHHHH
Q 015341 322 CDADLSSQLKSASYAALKRMTGATQHEIPVI----MSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 396 (408)
Q Consensus 322 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~----~~~g~tD~~~~~~~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~ 396 (408)
.+..+.+.+++++++. | ++.+.... ..+|+|++..++.. +|++.+ |..--..|++.|.+..+++..+
T Consensus 377 ~~~~~~~~l~~~a~~~-~-----Ip~Q~~~~~r~d~~~GgT~~~~~a~~Gi~tvdi--GiP~~~mHS~~E~~~~~Di~~~ 448 (458)
T 1y7e_A 377 ADAELVSYIRQLLNKN-N-----IAWQVATLGKVEEGGGGTVAKFLAGYGIRTIDM--GPAVISMHSPMEITSKFDLYNA 448 (458)
T ss_dssp -CHHHHHHHHHHHHHH-T-----CCEEEEEECC-----CHHHHHHHHHHTCEEEEE--CCEEBSTTSSSEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-C-----CCeEEEEeeccCCCCcCcHHHHHhCCCCCEEEE--chhhcccchHHHHhhHHHHHHH
Confidence 4677888888877775 2 33333221 13477877776655 566654 3333468999999999999999
Q ss_pred HHHHHHHHH
Q 015341 397 GLAVLAFLE 405 (408)
Q Consensus 397 ~~~~~~~l~ 405 (408)
.+++..|+.
T Consensus 449 ~~ll~af~~ 457 (458)
T 1y7e_A 449 YLAYKAFYR 457 (458)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHh
Confidence 999998864
No 62
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=84.68 E-value=1.6 Score=42.35 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=52.0
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCcccccccc----CCccchHHHHhhhh-cCeeEEEEecCCCCCCCCCCCCChhhHHHH
Q 015341 322 CDADLSSQLKSASYAALKRMTGATQHEIPVI----MSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 396 (408)
Q Consensus 322 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~----~~~g~tD~~~~~~~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~ 396 (408)
.++.+...+++.+++. .++.+.... ..+|+|.+...++. +|++-+..|.. ..||+.|-+...++..+
T Consensus 368 ~~~~~~~~~~~ia~~~------~Ip~Q~~~~gr~d~~gGstig~i~a~~Gi~tvdiGiP~l--~MHS~~E~~~~~D~~~~ 439 (450)
T 2glf_A 368 AHAEFVARVRKVLNEQ------GVIWQVATLGKVDQGGGGTIAKFFAERGSDVIDMGPALL--GMHSPFEISSKADLFET 439 (450)
T ss_dssp CCHHHHHHHHHHHHHT------TCCEEECCSSSTTSCCCCCTHHHHHTTTSCEEEEECEEB--STTSSSEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc------CCCEEEEEeccCCCCCCCcHHHHHhCCCCcEEEechhhc--ccchHHHHhhHHHHHHH
Confidence 3667777777777664 233333222 22345545444433 67776544433 58999999999999999
Q ss_pred HHHHHHHHHhh
Q 015341 397 GLAVLAFLETH 407 (408)
Q Consensus 397 ~~~~~~~l~~l 407 (408)
.+++..|+.+|
T Consensus 440 ~~l~~af~~~l 450 (450)
T 2glf_A 440 YVAYRSLMEKL 450 (450)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999875
No 63
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=82.57 E-value=1.6 Score=42.48 Aligned_cols=53 Identities=9% Similarity=0.045 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHHHHHcCcEE--E-----------Eccc-CcEEEEecCCCCCCCeEEEeeccccc
Q 015341 2 SPASVRAGNLIRQWMEDAGLRT--W-----------VDHL-GNVHGRVEGLNASAQALLIGSHLDTV 54 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~--~-----------~~~~-~nvia~~~g~~~~~~~i~l~~H~D~V 54 (408)
|+-++.+++++.++|++.||.- + .+.. +|++|...|..++.+.+++.+|+|-+
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 4557889999999999999953 1 1122 37999877753234799999999986
No 64
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=82.27 E-value=9 Score=37.40 Aligned_cols=89 Identities=13% Similarity=0.127 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHc-CcEEEEccc----------------C--c----EEEEecCCCCCCCeEEEeec---ccc-----cc
Q 015341 7 RAGNLIRQWMEDA-GLRTWVDHL----------------G--N----VHGRVEGLNASAQALLIGSH---LDT-----VV 55 (408)
Q Consensus 7 ~~~~~i~~~l~~~-G~~~~~~~~----------------~--n----via~~~g~~~~~~~i~l~~H---~D~-----Vp 55 (408)
..+++..+.++.+ |+++++... + + |..+++|.++..++|.|.|- +|+ =|
T Consensus 201 ~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp 280 (497)
T 3h8g_F 201 FLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLKP 280 (497)
T ss_dssp HHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTTSCCEEEEEEEEEEECCTTSCCC
T ss_pred HHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCCCCcEEEEcCceEeccCCccCCC
Confidence 3567788888888 998876321 1 1 66666665444567777664 222 23
Q ss_pred CCCCCCCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccc
Q 015341 56 DAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (408)
Q Consensus 56 ~~G~~D~k---~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~ 99 (408)
..+-.+|| +|-|+.+.+++++.+.+ ++.+|..+....|-.
T Consensus 281 ~~~M~~Mk~DM~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~ENm 323 (497)
T 3h8g_F 281 GAGMDEMKYDMCGAASVFGTLRAVLELQ----LPVNLVCLLACAENM 323 (497)
T ss_dssp STTGGGGGGTTHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEEC
T ss_pred ccchhhccccchHHHHHHHHHHHHHHcC----CCeEEEEEEEeeccC
Confidence 33433443 57788999999999984 789999999999875
No 65
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=81.53 E-value=2.5 Score=41.39 Aligned_cols=78 Identities=13% Similarity=0.011 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCcccccccc---CCccchHHHHhhh-h-cCeeEEEEecCCCCCCCCCCCCChhhHHHH
Q 015341 322 CDADLSSQLKSASYAALKRMTGATQHEIPVI---MSGAGHDAMAMSH-L-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 396 (408)
Q Consensus 322 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~---~~~g~tD~~~~~~-~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~ 396 (408)
.++.+...+++.+++. .++.+.... +.+|+|++...+. . +|++.+.+|.. ..||+.|-+...++..+
T Consensus 404 t~~~~~~~l~~ia~~~------~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvdIGiP~r--yMHS~~E~~~~~D~~~~ 475 (496)
T 3vat_A 404 SNAVSEALIREVASSV------GVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQL--AMHSIRETACTTGVLQT 475 (496)
T ss_dssp CCHHHHHHHHHHHHHH------TCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEEEECEEE--STTSSSEEEESHHHHHH
T ss_pred cCHHHHHHHHHHHHHc------CCCEEEEEecCCCCCcchHHHHHhcccCCcEEEecHhhh--ccccHHHHhhHHHHHHH
Confidence 4677778888777764 233332211 1257888876653 3 67776544443 68999999999999999
Q ss_pred HHHHHHHHHhh
Q 015341 397 GLAVLAFLETH 407 (408)
Q Consensus 397 ~~~~~~~l~~l 407 (408)
++++..|+.++
T Consensus 476 v~Ll~af~~~~ 486 (496)
T 3vat_A 476 ITLFKGFFELF 486 (496)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhH
Confidence 99999998754
No 66
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=79.13 E-value=5.5 Score=38.94 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHcCcEEEEcc--------c--------C--c----EEEEecCCCCCCCeEEEeec---ccc-----ccC
Q 015341 7 RAGNLIRQWMEDAGLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSH---LDT-----VVD 56 (408)
Q Consensus 7 ~~~~~i~~~l~~~G~~~~~~~--------~--------~--n----via~~~g~~~~~~~i~l~~H---~D~-----Vp~ 56 (408)
..++++.+.+++.|+++++.. + + + |..+++|.++..++|+|.|- +|+ =|.
T Consensus 218 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~ 297 (515)
T 3kzw_A 218 TFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGITYDSGGYSIKTK 297 (515)
T ss_dssp HHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSCCCEEEEEEEEEEECCTTSCCCH
T ss_pred HHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCCCcEEEecCceEEecCCcCCCCc
Confidence 356777888888899887532 1 1 1 55666665444567777654 121 111
Q ss_pred CCCCCC---hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccc
Q 015341 57 AGIFDG---SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (408)
Q Consensus 57 ~G~~D~---k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~ 99 (408)
.+-.+| ++|-|+.+.+++++.+.+ ++.+|..+....|-.
T Consensus 298 ~~M~~MK~DM~GAAaVlg~~~a~a~l~----lpvnv~~~i~~~ENm 339 (515)
T 3kzw_A 298 NGMATMKFDMCGAANVVGIIEAASRLQ----LPVNIVGVLACAENM 339 (515)
T ss_dssp HHHTTGGGGGHHHHHHHHHHHHHHHTT----CSCEEEEEEEEEEEC
T ss_pred cChhhchhchHHHHHHHHHHHHHHHcC----CCceEEEEEEeeccC
Confidence 122233 357788999999999984 789999999988865
No 67
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=77.58 E-value=1.6 Score=42.46 Aligned_cols=52 Identities=13% Similarity=0.049 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHHHHHcCcE-------------EEEcccCcEEEEec-CCCC--CCCeEEEeeccccc
Q 015341 2 SPASVRAGNLIRQWMEDAGLR-------------TWVDHLGNVHGRVE-GLNA--SAQALLIGSHLDTV 54 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~-------------~~~~~~~nvia~~~-g~~~--~~~~i~l~~H~D~V 54 (408)
|+-++.+++++.++|++.||. +..+..+|.|+.+. |.++ ++.. ++.+|+|..
T Consensus 32 spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 32 FKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp CCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 455778999999999999986 34444567555543 5432 2345 999999997
No 68
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=76.64 E-value=12 Score=36.50 Aligned_cols=89 Identities=16% Similarity=0.091 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHc-CcEEEEcc--------c--------C--c----EEEEecCCCCCCCeEEEeec---ccc-----cc
Q 015341 7 RAGNLIRQWMEDA-GLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSH---LDT-----VV 55 (408)
Q Consensus 7 ~~~~~i~~~l~~~-G~~~~~~~--------~--------~--n----via~~~g~~~~~~~i~l~~H---~D~-----Vp 55 (408)
..+++..+.++.+ |+++++.. + + + |..+++|.++..++|.|.|- +|+ =|
T Consensus 185 ~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp 264 (486)
T 3pei_A 185 YMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGDAPIVLVGKGLVFDNGGICIKQ 264 (486)
T ss_dssp HHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTSCCEEEEEEEEETEECC-----
T ss_pred HHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCCCcEEEEccceEEecCCcccCC
Confidence 3567788888888 89887532 1 1 1 66666665444567777654 222 12
Q ss_pred CCCCCCC---hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccc
Q 015341 56 DAGIFDG---SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (408)
Q Consensus 56 ~~G~~D~---k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~ 99 (408)
..+-.+| ++|-|+.+.+++++.+.+ ++.+|..+....|-.
T Consensus 265 ~~~M~~Mk~DM~GAAaVlg~~~a~a~l~----l~vnv~~~i~~~ENm 307 (486)
T 3pei_A 265 AAGMDSMKMDMGGVAAVMGTMKAIAMLN----LPVNVVGVMGLAENA 307 (486)
T ss_dssp -------EECSHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEC-
T ss_pred ccchhhhhccchHHHHHHHHHHHHHHcC----CCcEEEEEEEeeccC
Confidence 2333333 357788999999999984 789999999998865
No 69
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=76.20 E-value=26 Score=34.12 Aligned_cols=89 Identities=13% Similarity=0.051 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHcCcEEEEcc--------c--------C--c----EEEEecCCCCCCCeEEEeec---cc-----cccC
Q 015341 7 RAGNLIRQWMEDAGLRTWVDH--------L--------G--N----VHGRVEGLNASAQALLIGSH---LD-----TVVD 56 (408)
Q Consensus 7 ~~~~~i~~~l~~~G~~~~~~~--------~--------~--n----via~~~g~~~~~~~i~l~~H---~D-----~Vp~ 56 (408)
..+++..+.++++|+++++.. + + + |..++.|.+ ..++|+|.|- +| -=|.
T Consensus 188 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~-~~~~i~LVGKGiTFDsGG~slKp~ 266 (491)
T 2hc9_A 188 ALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPG-STEHIALVGKGVVYDTGGLQIKTK 266 (491)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTT-CSCEEEEEEEEEEEECCTTSCCCT
T ss_pred HHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCC-CCCcEEEEcCceEecCCCccCCCC
Confidence 457788888899999987632 1 1 1 555565543 2366777653 12 2233
Q ss_pred CCCCCCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccccc
Q 015341 57 AGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (408)
Q Consensus 57 ~G~~D~k---~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~ 100 (408)
.+-..|| +|-|+.+.+++++.+. +++.+|..++...|-..
T Consensus 267 ~~M~~Mk~DM~GAAaVlg~~~a~a~l----~l~vnv~~~l~~~ENm~ 309 (491)
T 2hc9_A 267 TGMPNMKRDMGGAAGMLEAYSALVKH----GFSQTLHACLCIVENNV 309 (491)
T ss_dssp TTSTTGGGGGHHHHHHHHHHHHHHTT----TCCSEEEEEEEEEEECC
T ss_pred cChhhccccccHHHHHHHHHHHHHHc----CCCceEEEEEEeeecCC
Confidence 3434443 6788899999999987 47899999999888753
No 70
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=75.29 E-value=18 Score=35.43 Aligned_cols=90 Identities=16% Similarity=0.112 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHcC--cEEEEccc----------------C--c----EEEEecCCCC-CCCeEEEeec---ccc-----
Q 015341 7 RAGNLIRQWMEDAG--LRTWVDHL----------------G--N----VHGRVEGLNA-SAQALLIGSH---LDT----- 53 (408)
Q Consensus 7 ~~~~~i~~~l~~~G--~~~~~~~~----------------~--n----via~~~g~~~-~~~~i~l~~H---~D~----- 53 (408)
..+++..+.++++| +++++... | + |+.+|.|..+ ..++|+|.|= +|+
T Consensus 202 ~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~~~~~~i~LVGKGITFDsGGisl 281 (503)
T 1gyt_A 202 YLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISI 281 (503)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCCTTCCCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCCCCCCcEEEEcCceEecCCCccc
Confidence 35677888888899 98876321 1 1 6666666432 2466777653 222
Q ss_pred ccCCCCCCCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccccc
Q 015341 54 VVDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (408)
Q Consensus 54 Vp~~G~~D~k---~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~ 100 (408)
=|..+-.+|| +|-|+.+.+++++.+.+ ++.+|..+....|-..
T Consensus 282 Kp~~~M~~MK~DM~GAAaVlg~~~aia~l~----l~vnV~~~i~~~ENm~ 327 (503)
T 1gyt_A 282 KPSEGMDEMKYDMCGAAAVYGVMRMVAELQ----LPINVIGVLAGCENMP 327 (503)
T ss_dssp CCSTTGGGGGGGGHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEECC
T ss_pred cCCcChhhcccccchHHHHHHHHHHHHHcC----CCeeEEEEEEeeccCC
Confidence 2333444444 57888999999999984 7899999999998753
No 71
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=74.63 E-value=22 Score=34.65 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHcC--cEEEEcc--------c--------C--c----EEEEecCCC-CCCCeEEEeec---ccc-----
Q 015341 7 RAGNLIRQWMEDAG--LRTWVDH--------L--------G--N----VHGRVEGLN-ASAQALLIGSH---LDT----- 53 (408)
Q Consensus 7 ~~~~~i~~~l~~~G--~~~~~~~--------~--------~--n----via~~~g~~-~~~~~i~l~~H---~D~----- 53 (408)
..+++..+.++++| +++++.. + + + |..++.|.. +..++|+|.|- +|+
T Consensus 182 ~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~~~i~LVGKGITFDsGG~sl 261 (484)
T 1lam_A 182 KFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPNASEPPLVFVGKGITFDSGGISI 261 (484)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSSTTSCCEEEEECEEEEECCTTSC
T ss_pred HHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCCCCCCCcEEEEecceEEcCCCcCC
Confidence 35677888888899 8887632 1 1 1 556665543 22345666653 221
Q ss_pred ccCCCCCCCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccc
Q 015341 54 VVDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (408)
Q Consensus 54 Vp~~G~~D~k---~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~ 99 (408)
=|..+-.+|| +|-|+.+.+++++.+. +++.+|..++...|-.
T Consensus 262 Kp~~~M~~MK~DMgGAAaVlg~~~aia~l----~l~vnv~~~i~~~ENm 306 (484)
T 1lam_A 262 KAAANMDLMRADMGGAATICSAIVSAAKL----DLPINIVGLAPLCENM 306 (484)
T ss_dssp CCSTTGGGGGGTTHHHHHHHHHHHHHHHT----TCSSEEEEEEEEEEEC
T ss_pred cCccchhhhhccchHHHHHHHHHHHHHHc----CCCeeEEEEEEeeccC
Confidence 1333333443 5778899999999988 4789999999998865
No 72
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=73.32 E-value=7 Score=38.86 Aligned_cols=84 Identities=13% Similarity=-0.027 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCcccccccc---CCccchHHHHhh-hh-cCeeEEEEecCCCCCCCCCCCCChhhHHHH
Q 015341 322 CDADLSSQLKSASYAALKRMTGATQHEIPVI---MSGAGHDAMAMS-HL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 396 (408)
Q Consensus 322 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~---~~~g~tD~~~~~-~~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~ 396 (408)
.++.+.+.+++.+++..+...-.++.+.... ..+|+|++.... +. +|++.+.+|.. ..|++.|-+...++..+
T Consensus 472 tn~~~~~~l~~iA~~~~~~~~~gIP~Q~~v~rnD~~gGgTig~i~~s~~GIpTvdIGiP~r--yMHS~~E~~~~~Dv~~~ 549 (571)
T 4eme_A 472 TSPLHASLIKRTFELYYNKYKQQIKYQNFMVKNDTPCGSTVGSMVAANLSMPGIDIGIPQL--AMHSIREIAAVHDVFFL 549 (571)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCSSSCCCCCSHHHHHHHHTCCEEEEECEEE--STTSSSEEEEHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcccccCCCCCEEEEEEcCCCCCcchHHHHHHhCCCCcEEEechhhh--ccchHHHHhhHHHHHHH
Confidence 3567778888777765211000122222211 135788876654 33 68776644443 68999999999999999
Q ss_pred HHHHHHHHHhh
Q 015341 397 GLAVLAFLETH 407 (408)
Q Consensus 397 ~~~~~~~l~~l 407 (408)
++++..|+.++
T Consensus 550 vkLl~aFl~~~ 560 (571)
T 4eme_A 550 IKGVFAFYTYY 560 (571)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhH
Confidence 99999998764
No 73
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=73.30 E-value=6.7 Score=38.46 Aligned_cols=50 Identities=22% Similarity=0.160 Sum_probs=42.2
Q ss_pred CeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHcCC
Q 015341 251 SLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 307 (408)
Q Consensus 251 ~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~~~~~ 307 (408)
.+|+|++.++.. ++++++++++|+++..+.+++.++++++++........
T Consensus 347 ~~S~n~gv~~~~-------~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~~~ 396 (490)
T 3mru_A 347 ETSLNVGVITTE-------ENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEF 396 (490)
T ss_dssp EEEEEEEEEEEE-------TTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEEEEEEe-------CCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeEEe
Confidence 678998888863 68899999999999999999999999999876544433
No 74
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=72.59 E-value=23 Score=34.51 Aligned_cols=88 Identities=17% Similarity=0.151 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHc-CcEEEEccc----------------C--c----EEEEecCCCCCCCeEEEeec---ccc-----cc
Q 015341 7 RAGNLIRQWMEDA-GLRTWVDHL----------------G--N----VHGRVEGLNASAQALLIGSH---LDT-----VV 55 (408)
Q Consensus 7 ~~~~~i~~~l~~~-G~~~~~~~~----------------~--n----via~~~g~~~~~~~i~l~~H---~D~-----Vp 55 (408)
..+++..+.++++ |+++++... + + |..++.|.. ..++|+|.|- +|+ =|
T Consensus 197 ~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~-~~~~i~LVGKGiTFDsGG~slKp 275 (490)
T 3jru_B 197 YLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGG-DARPYVLVGKGITFDTGGVNLKT 275 (490)
T ss_dssp HHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTT-TSCCEEEEECEEEEECCTTSCCC
T ss_pred HHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCC-CCCcEEEEcCeeEecCCCccCCC
Confidence 3567778888777 998875321 1 1 556666654 3466777654 222 23
Q ss_pred CCCCCCCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccc
Q 015341 56 DAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (408)
Q Consensus 56 ~~G~~D~k---~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~ 99 (408)
..+-.+|| +|-|+.+.+++++.+.+ ++.+|..++...|-.
T Consensus 276 ~~~M~~Mk~DM~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~ENm 318 (490)
T 3jru_B 276 QGGIEEMKYDMCGGATVIGTFVATVKAE----LPINLVVVVPAVENA 318 (490)
T ss_dssp SSCGGGGGGGGHHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEEC
T ss_pred cccHhhCcccchHHHHHHHHHHHHHHcC----CCcEEEEEEEeeccC
Confidence 33333443 57888999999999984 789999999988875
No 75
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=70.49 E-value=27 Score=34.08 Aligned_cols=88 Identities=10% Similarity=-0.000 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHcCcEEEEcc--------cC----------c----EEEEecCCCCCCCeEEEeeccccccCCCCC----
Q 015341 7 RAGNLIRQWMEDAGLRTWVDH--------LG----------N----VHGRVEGLNASAQALLIGSHLDTVVDAGIF---- 60 (408)
Q Consensus 7 ~~~~~i~~~l~~~G~~~~~~~--------~~----------n----via~~~g~~~~~~~i~l~~H~D~Vp~~G~~---- 60 (408)
..++++.+.++++|+++++.. ++ + |..++.|.++..++|.|.|-== .+.-|+.
T Consensus 225 ~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~~iaLVGKGI-TFDSGGlsLKp 303 (522)
T 4efd_A 225 TFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVKKVSLVGKGI-VYDCGGLALKP 303 (522)
T ss_dssp HHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSEEEEEEEEEE-ETCCCCSSSCH
T ss_pred HHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCCcEEEecCce-EeecCCccCCC
Confidence 357778888899999886532 11 1 5555655443346677765410 0111332
Q ss_pred -----C---ChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccc
Q 015341 61 -----D---GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (408)
Q Consensus 61 -----D---~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~ 99 (408)
+ +++|-|+.+.+++++.+.+ ++.+|..++...|-.
T Consensus 304 ~~~M~~MK~DMgGAAaVlga~~a~a~l~----lpvnV~~vl~~~ENm 346 (522)
T 4efd_A 304 ADYMKLMKHDMGGAAAVFCGFLTAVRLQ----QPVQLSCTLCLAENA 346 (522)
T ss_dssp HHHHHHGGGTTHHHHHHHHHHHHHHHHT----CSEEEEEEEEEEECC
T ss_pred ccchhhcccccchHHHHHHHHHHHHHcC----CCceEEEEEEEeccC
Confidence 1 2356778899999999884 789999999888765
No 76
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=69.06 E-value=2.5 Score=40.73 Aligned_cols=53 Identities=25% Similarity=0.334 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHHHHcCc---------------EEEEccc-CcEEEEecCCC--CCCCeEEEeeccccc
Q 015341 2 SPASVRAGNLIRQWMEDAGL---------------RTWVDHL-GNVHGRVEGLN--ASAQALLIGSHLDTV 54 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~---------------~~~~~~~-~nvia~~~g~~--~~~~~i~l~~H~D~V 54 (408)
|+-++.+++++.++|++.|| ++..+.. +|++|...|.+ ++.+.+++.+|+|.+
T Consensus 15 ~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 15 SPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp THHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 56788999999999999999 2334445 68999877753 134789999999997
No 77
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=59.19 E-value=60 Score=31.78 Aligned_cols=89 Identities=10% Similarity=0.058 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHcCcEEEEccc----------------C--c----EEEEecCCCCCCCeEEEeec---ccc-----ccCC
Q 015341 8 AGNLIRQWMEDAGLRTWVDHL----------------G--N----VHGRVEGLNASAQALLIGSH---LDT-----VVDA 57 (408)
Q Consensus 8 ~~~~i~~~l~~~G~~~~~~~~----------------~--n----via~~~g~~~~~~~i~l~~H---~D~-----Vp~~ 57 (408)
.++...+.++++|+++++... | + |..++.|.++..++|.|.|- +|+ =|..
T Consensus 227 lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~~iaLVGKGITFDsGG~slKp~~ 306 (528)
T 3kr4_A 227 LSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKKKIALVGKGITFDSGGYNLKAAP 306 (528)
T ss_dssp HHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCEEEEEEEEEEEEECCTTSCSCST
T ss_pred HHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCCcEEEecCceEeecCCcccCCCC
Confidence 456677788888999876321 1 1 56666665433467777764 232 2333
Q ss_pred C--CCCCh---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccc
Q 015341 58 G--IFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (408)
Q Consensus 58 G--~~D~k---~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~ 99 (408)
| -.+|| +|-|+.+.+++++.+.+ ..+.+|..++...|-.
T Consensus 307 g~~M~~MK~DM~GAAaVlg~~~aia~l~---~~~vnv~~vi~~~ENm 350 (528)
T 3kr4_A 307 GSMIDLMKFDMSGCAAVLGCAYCVGTLK---PENVEIHFLSAVCENM 350 (528)
T ss_dssp TCCGGGGGGGGHHHHHHHHHHHHHHHHC---CSSEEEEEEEEEEEEC
T ss_pred CcCHHHhhcCcchHHHHHHHHHHHHhcC---CCCceEEEEEEeeccC
Confidence 3 23344 57778899999988874 1357898888888765
No 78
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=57.24 E-value=64 Score=28.65 Aligned_cols=78 Identities=18% Similarity=0.109 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHHHHhhccCCccccccccCCccchHHHHhhhh-cCeeEEEEec-------------------CCCCCC
Q 015341 323 DADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVGMLFVRC-------------------RGGISH 382 (408)
Q Consensus 323 ~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~g~-------------------~~~~~H 382 (408)
++.+.+.+...+++. |. +....... .+.+|...|... +|++.+..+. .+...|
T Consensus 175 ~~~l~~~~~~~~~~~-gi-----~~~~~~~~-~~~sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yH 247 (284)
T 1tkj_A 175 DPVIEKTFKNYFAGL-NV-----PTEIETEG-DGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYH 247 (284)
T ss_dssp SHHHHHHHHHHHHHH-TC-----CCEECCSS-TTCSTHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTT
T ss_pred CHHHHHHHHHHHHHc-CC-----CcccCCCC-CCCCchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCC
Confidence 455666666555443 22 12222211 255787666555 7888665541 123579
Q ss_pred CCCCC---CChhhHHHHHHHHHHHHHhh
Q 015341 383 SPAEH---VLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 383 ~~~E~---i~i~~~~~~~~~~~~~l~~l 407 (408)
++.+. ++.+.+...+++++.++.+|
T Consensus 248 t~~D~~~~id~~~l~~~~~~~~~~~~~l 275 (284)
T 1tkj_A 248 SSCDSLSNINDTALDRNSDAAAHAIWTL 275 (284)
T ss_dssp STTCSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcCChhhCCHHHHHHHHHHHHHHHHHH
Confidence 99866 89999999999999988765
No 79
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=52.19 E-value=59 Score=31.44 Aligned_cols=87 Identities=9% Similarity=0.113 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHcCcEEEEcc-------cC----------c----EEEEecCCCCCCCeEEEeec---ccc-----ccCC
Q 015341 7 RAGNLIRQWMEDAGLRTWVDH-------LG----------N----VHGRVEGLNASAQALLIGSH---LDT-----VVDA 57 (408)
Q Consensus 7 ~~~~~i~~~l~~~G~~~~~~~-------~~----------n----via~~~g~~~~~~~i~l~~H---~D~-----Vp~~ 57 (408)
..+++.++.++++|+++++.. ++ + |..++ |. ++.++|.|.|= +|+ =|..
T Consensus 188 ~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y-~~-~~~~~i~LVGKGITFDsGGlslKp~~ 265 (482)
T 3ij3_A 188 ELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW-GD-IKAPKVTLVGKGVCFDSGGLDIKTPG 265 (482)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE-SC-TTSCEEEEEECEEEEECCTTSCCCHH
T ss_pred HHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe-CC-CCCCeEEEEccceEeecCCccCcCcc
Confidence 356778888889999886531 11 1 44444 22 23456666553 111 1111
Q ss_pred CCCCC---hHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccc
Q 015341 58 GIFDG---SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (408)
Q Consensus 58 G~~D~---k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~ 99 (408)
+-.+| +++-|+.+.+++++.+. +++.+|..++...|-.
T Consensus 266 ~M~~MK~DMgGAAaVlg~~~aia~l----~lpvnv~~ii~~~ENm 306 (482)
T 3ij3_A 266 GMLLMKKDMGGAAHALGLARMIMLQ----QLPVRLRLLIPAVENA 306 (482)
T ss_dssp HHTTGGGGGHHHHHHHHHHHHHHHT----TCSSEEEEEEEEEEEC
T ss_pred chhhccccchHHHHHHHHHHHHHHc----CCCceEEEEEEeeccC
Confidence 11233 35778889999999998 4789999999888765
No 80
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=50.66 E-value=6.1 Score=38.44 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=50.1
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCccccccc----cCCccchHHHHhhhh-cCeeEEEEecCCCCCCCCCCCCChhhHHHH
Q 015341 322 CDADLSSQLKSASYAALKRMTGATQHEIPV----IMSGAGHDAMAMSHL-TKVGMLFVRCRGGISHSPAEHVLDDDVWAA 396 (408)
Q Consensus 322 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~----~~~~g~tD~~~~~~~-~p~~~~~~g~~~~~~H~~~E~i~i~~~~~~ 396 (408)
.+..+...+++.+++. .++.+... -+.+|||....++.. +|++-+..|. -..|++.|.+...++..+
T Consensus 380 ~~~~~~~~l~~ia~~~------~Ip~Q~~~~gr~d~~~GgTig~~~a~~Gi~tvdiGiP~--l~MHS~~E~~~~~Di~~~ 451 (461)
T 2glj_A 380 ANPEYIAELRRILSKE------SVNWQTAELGKVDQGGGGTIAYILAEYGMQVIDCGVAL--LNMHAPWEISSKADIYET 451 (461)
T ss_dssp CCHHHHHHHHHHHHHT------CCCEEECCSSSSSSSCCCCTHHHHHTTTCBCCBBCCEE--ESTTSSSEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc------CCCeEEEeeeccCCCCcccHHHHHhCCCCCEEEEchhh--cccchHHHHhhHHHHHHH
Confidence 4677777887777764 23333311 113477777666544 5666432222 358999999999999999
Q ss_pred HHHHHHHHH
Q 015341 397 GLAVLAFLE 405 (408)
Q Consensus 397 ~~~~~~~l~ 405 (408)
.+++..|+.
T Consensus 452 ~~l~~af~~ 460 (461)
T 2glj_A 452 KNGYSAFLN 460 (461)
T ss_dssp HHHHHTTSC
T ss_pred HHHHHHHHh
Confidence 999988764
No 81
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=37.62 E-value=44 Score=22.84 Aligned_cols=28 Identities=25% Similarity=0.324 Sum_probs=23.2
Q ss_pred EEEEEEeeCCChHHHHHHHHHHHHHHHH
Q 015341 273 VTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (408)
Q Consensus 273 a~~~~~iR~~p~~~~~~v~~~i~~~~~~ 300 (408)
-++++|+|...+...+...++++..+..
T Consensus 17 qeieidirvstgkeleralqelekalar 44 (96)
T 2jvf_A 17 QEIEIDIRVSTGKELERALQELEKALAR 44 (96)
T ss_dssp EEEEEEEECCSSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEcccHHHHHHHHHHHHHHHh
Confidence 6889999999998888888888777654
No 82
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=36.71 E-value=16 Score=35.41 Aligned_cols=36 Identities=22% Similarity=0.152 Sum_probs=27.8
Q ss_pred CCCChHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccccc
Q 015341 59 IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (408)
Q Consensus 59 ~~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i~~i~~~~EE~~ 100 (408)
..|++.++.++|.|+..++ +++.+++++++..||.|
T Consensus 259 ~lDdr~~~~~~l~al~~~~------~~~~~~~~~~~d~EEVG 294 (461)
T 2glj_A 259 GQDDRICAYTSFEAMLEMK------NAKKTCITILVDKEEVG 294 (461)
T ss_dssp THHHHHHHHHHHHHHHTCC------SCSSCEEEEEECCGGGT
T ss_pred cchhHHHHHHHHHHHHhhc------cCCCeEEEEEEccCCCC
Confidence 4588888877776665442 46789999999999985
No 83
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=35.87 E-value=67 Score=30.42 Aligned_cols=51 Identities=12% Similarity=0.148 Sum_probs=37.1
Q ss_pred cchHHHHhhhh-cCeeEEEEec-CCCCCCCCCCC---CChhhHHHHHHHHHHHHHhh
Q 015341 356 AGHDAMAMSHL-TKVGMLFVRC-RGGISHSPAEH---VLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 356 g~tD~~~~~~~-~p~~~~~~g~-~~~~~H~~~E~---i~i~~~~~~~~~~~~~l~~l 407 (408)
+++|...|... +|++. +.+. .+...|++.+. ++.+.+...++++..++.+|
T Consensus 344 ~~SD~~~F~~~GIP~~~-~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~l 399 (421)
T 2ek8_A 344 GRSDHESFHALGIPAAL-FIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQA 399 (421)
T ss_dssp CSSTHHHHHTTTCCEEE-EEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHCCCCEEE-EECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 56787666555 88874 3332 33467999876 88899999999998888764
No 84
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=35.63 E-value=35 Score=30.90 Aligned_cols=52 Identities=12% Similarity=0.027 Sum_probs=36.5
Q ss_pred chHHHHhhhh-cCeeEEEEecCCCCCCCCC---CCCChhhHHHHHHHHHHHHHhhC
Q 015341 357 GHDAMAMSHL-TKVGMLFVRCRGGISHSPA---EHVLDDDVWAAGLAVLAFLETHV 408 (408)
Q Consensus 357 ~tD~~~~~~~-~p~~~~~~g~~~~~~H~~~---E~i~i~~~~~~~~~~~~~l~~l~ 408 (408)
.+|-.-|... +|.+.++....+...|+++ |+++.+.+...++++..++.++|
T Consensus 243 ~SDH~pF~~~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l 298 (312)
T 4f9u_A 243 DDDHRPFLDENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYL 298 (312)
T ss_dssp CCTTHHHHTTTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHCCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4676555555 8888665333334568876 67888999999999988887653
No 85
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=28.10 E-value=83 Score=31.22 Aligned_cols=52 Identities=21% Similarity=0.309 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHcCcEEEEccc-------C----------cEEEEecCCC--CCCC-eEEEeeccccc
Q 015341 2 SPASVRAGNLIRQWMEDAGLRTWVDHL-------G----------NVHGRVEGLN--ASAQ-ALLIGSHLDTV 54 (408)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~~~~~~~-------~----------nvia~~~g~~--~~~~-~i~l~~H~D~V 54 (408)
|+-++.+++++.++|++.||.- +.+. | .|+|..-|.. ++.. --++.+|+|.-
T Consensus 20 spT~~HaV~~~~~~L~~aGF~~-L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 20 SGSNFLACKNLKERLENNGFIN-LSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp CCSHHHHHHHHHHHHHHTTCEE-CCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEE-ccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 4557889999999999999963 2211 1 2777655653 3334 67899999974
No 86
>2zvy_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell inner membrane, cell membrane, flagellar rotation, membrane; 1.75A {Salmonella typhimurium} PDB: 2zvz_A
Probab=27.17 E-value=1.3e+02 Score=24.88 Aligned_cols=51 Identities=18% Similarity=0.118 Sum_probs=34.7
Q ss_pred eEEEeeccccccCCCC----CCChHHHHHHHHHHHHHHhcCCCCCCCCCE-EEEEeccc
Q 015341 44 ALLIGSHLDTVVDAGI----FDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDE 97 (408)
Q Consensus 44 ~i~l~~H~D~Vp~~G~----~D~k~~ia~~l~a~~~l~~~~~~~~~~~~i-~~i~~~~E 97 (408)
.|.+.||.|.+|..++ .....+..=+.++.++|.+.|+ .+.+| .....++.
T Consensus 92 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi---~~~ri~~~~G~G~~ 147 (183)
T 2zvy_A 92 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL---DNGKVLRVVGMAAT 147 (183)
T ss_dssp CEEEEEECCSSCTTCSTTSSCHHHHHHHHHHHHHHHHHHTTC---CTTCEEEEEECTTT
T ss_pred eEEEEEEeCCCCCccccccccHHHHHHHHHHHHHHHHHHcCC---CHHHhheeEEeccc
Confidence 7999999999987432 2334455556677788888886 45667 45555443
No 87
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=24.00 E-value=1.7e+02 Score=28.12 Aligned_cols=47 Identities=15% Similarity=0.083 Sum_probs=38.9
Q ss_pred CCeEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHH
Q 015341 250 SSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303 (408)
Q Consensus 250 ~~~t~~v~~i~g~g~~~NviP~~a~~~~~iR~~p~~~~~~v~~~i~~~~~~~~~ 303 (408)
..+|+|++.++-. .+++++.+++|++.....+.+.+.++...+....
T Consensus 344 ~~~s~nl~~~~~~-------~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~ 390 (487)
T 2qyv_A 344 VETSLSIGVLKTE-------DNFVRSTMLVRSLIESGKSYVASLLKSLASLAQG 390 (487)
T ss_dssp EEEEEEEEEEEEC-------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTC
T ss_pred eEeccceEEEEEc-------CCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCc
Confidence 4789999999873 2679999999999999999999999888765443
No 88
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=22.89 E-value=77 Score=30.34 Aligned_cols=53 Identities=15% Similarity=0.150 Sum_probs=39.4
Q ss_pred ccchHHHHhhhh-cCeeEEEEecCC--CCCCCC---CCCCChhhHHHHHHHHHHHHHhh
Q 015341 355 GAGHDAMAMSHL-TKVGMLFVRCRG--GISHSP---AEHVLDDDVWAAGLAVLAFLETH 407 (408)
Q Consensus 355 ~g~tD~~~~~~~-~p~~~~~~g~~~--~~~H~~---~E~i~i~~~~~~~~~~~~~l~~l 407 (408)
.+++|...|... +|++.++..... ...|++ -|+++.+.+...++++..++..|
T Consensus 372 ~~~SD~~~f~~~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~l 430 (444)
T 3iib_A 372 SGGPDVSMLPALGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVM 430 (444)
T ss_dssp CCCGGGTTSGGGTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHCCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHH
Confidence 468898777766 788866543222 357988 46899999999999998887754
No 89
>1x9z_A DNA mismatch repair protein MUTL; alpha-beta fold, dimer, replication, signaling protein; HET: DNA MSE; 2.10A {Escherichia coli} SCOP: d.292.1.1
Probab=22.33 E-value=1.2e+02 Score=25.12 Aligned_cols=26 Identities=15% Similarity=0.114 Sum_probs=22.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEc
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVD 26 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~ 26 (408)
+|..|....+-..+.|+++||+++..
T Consensus 65 ls~~e~~~l~~~~~~l~~~Gf~~e~~ 90 (188)
T 1x9z_A 65 VSAEEKSALEKAQSALAELGIDFQSD 90 (188)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred eCHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 57889999999999999999998653
No 90
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=20.59 E-value=1.4e+02 Score=22.26 Aligned_cols=35 Identities=9% Similarity=0.091 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCcEEEEcc--cCcEEEEe
Q 015341 1 MSPASVRAGNLIRQWMEDAGLRTWVDH--LGNVHGRV 35 (408)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~~~~~~--~~nvia~~ 35 (408)
+|++-.+.++++.+++.+.||++.... ..|+++++
T Consensus 3 IT~eMe~~~d~~~e~l~~~~ie~K~~~~~RSN~~i~f 39 (108)
T 1kaf_A 3 ITSDMEEDKDLMLKLLDKNGFVLKKVEIYRSNYLAIL 39 (108)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEE
T ss_pred cCHHHHHHHHHHHHHhhhcCceeeeeEeeccceEEee
Confidence 467888999999999999999875432 35877776
No 91
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=20.29 E-value=96 Score=28.41 Aligned_cols=53 Identities=17% Similarity=0.129 Sum_probs=38.1
Q ss_pred cchHHHHhhhh-cCeeEEEEecCCCCCCCCC---CCCChhhHHHHHHHHHHHHHhhC
Q 015341 356 AGHDAMAMSHL-TKVGMLFVRCRGGISHSPA---EHVLDDDVWAAGLAVLAFLETHV 408 (408)
Q Consensus 356 g~tD~~~~~~~-~p~~~~~~g~~~~~~H~~~---E~i~i~~~~~~~~~~~~~l~~l~ 408 (408)
+.+|-.-|.+. +|.+.++-.+-+...|++. |+++.+.+...++++..|+.++|
T Consensus 272 ~~SDH~pF~~~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~Eyl 328 (330)
T 3pb6_X 272 VEDDHIPFLRRGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAEYL 328 (330)
T ss_dssp CSCTTHHHHTTTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHhHHHCCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHHHHHh
Confidence 46776666555 8888665222234578876 57899999999999999988754
Done!