BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015345
(408 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225442888|ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
vinifera]
Length = 403
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/387 (74%), Positives = 330/387 (85%), Gaps = 5/387 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+WL+LDSPPFPSFQFGM GA+YIKGVAVT+YKRSAVKDTDEWPSKYSK F+ELDDGLEL
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL DP SVPPISELGPDALLEPMT+DEF SLSKKKI IKALLLDQSY
Sbjct: 121 SFTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
I+GIGNW+ADEVLY A+IHPLQ A SL++ESC TL +CIK+VIEKA+EVGADSSQFPSNW
Sbjct: 181 IAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVIEKAMEVGADSSQFPSNW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAP---KG 297
IFHSREKKPGKAFVDGKKIDFI+AGGRTTAYVPELQKL+G QAAKA KPRKQ P K
Sbjct: 241 IFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPELQKLSGTQAAKASVKPRKQTPMRKKE 300
Query: 298 EDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSKESDTEDDDGGN 357
E+ +DDD ++ DE S+ E+ + KSKK Q G K+P P KRK +ESD + DD +
Sbjct: 301 ENDEDDDDDDALDEPASEEEKNTKRAKSKKGQNPKGGGKKP-PAKRKVEESDNDSDDNDD 359
Query: 358 DDDGGGSDDNAEEAPKTKSGKVTKNKQ 384
++D D++ + K K+ +VTKNKQ
Sbjct: 360 NNDDDDDDEDKDGDQK-KAKRVTKNKQ 385
>gi|255553261|ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis]
gi|223543305|gb|EEF44837.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis]
Length = 403
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/413 (65%), Positives = 322/413 (77%), Gaps = 15/413 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR+AIEE+C+GKKI K+IIA D KVIDGVS SDFEA+++GK ++SAHRKGK
Sbjct: 1 MPELPEVEAARKAIEENCLGKKIKKAIIASDAKVIDGVSPSDFEAALVGKTLISAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL+LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAV DTDEWPSKYSK FVELDDGLEL
Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKLFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLLN+P SVPPISELGPDALL+PM VDEF SL KKK+ IKALLLDQS+
Sbjct: 121 SFTDKRRFAKVRLLNNPVSVPPISELGPDALLQPMAVDEFYKSLCKKKMPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHP Q+A S +KESCATLLKCIKEVIEKA+EV ADSSQFP++W
Sbjct: 181 ISGIGNWIADEVLYQARIHPQQSASSFTKESCATLLKCIKEVIEKAIEVEADSSQFPNSW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFHSREKKPGKAF+DGKKIDFIT+GGRTTAYVPELQKL+G Q +K R+ + ED+
Sbjct: 241 IFHSREKKPGKAFIDGKKIDFITSGGRTTAYVPELQKLSGNQISK-----RRNS---EDN 292
Query: 301 KDDDKYNSGDESESDGEEI----AENVKSKKRQKLGGQVKQPSPRKRKSKESDTEDDDGG 356
DD+ G+++ S+ + A+ K K+ K G+ K+P P ++K+K +D ++D+
Sbjct: 293 NDDNGV-EGEDAASNAASLEDGAAKKAKPKRELKPRGRGKKPPP-EQKTKATDADEDNDE 350
Query: 357 NDDDGGGSDDNA-EEAPKTKSGKVTKNKQAKAVTTSKEKVISQKGKPSKKKAK 408
+ DD EE K K + +KQ S + V K KK K
Sbjct: 351 AACNANNEDDQVKEEDQKKKEQSASNDKQPNGKKRSDKTVTDHNNKKPKKTVK 403
>gi|356547444|ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
Length = 399
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/410 (66%), Positives = 317/410 (77%), Gaps = 13/410 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+E +C+GK+I K ++ADD+KVI GVS SDF+ASVLGK I++AHRKGK
Sbjct: 1 MPELPEVEAARRAVEYNCVGKRITKCVVADDSKVIHGVSPSDFQASVLGKLIVAAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+WL+LDSPPFPSFQFGM GAIYIKG AVT YKRSAVKD DEWPSKYSK F+ELDDGLEL
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAIYIKGAAVTNYKRSAVKDEDEWPSKYSKIFIELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL DPTSVPPISELGPDAL EPMT+++FT+SL KKK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKVRLLKDPTSVPPISELGPDALFEPMTLEKFTESLHKKKTEIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNWVADEVLYQA+IHP Q A SLS ESC+ L KCIKEVIEKA+EVGA+SSQ+P+NW
Sbjct: 181 ISGIGNWVADEVLYQARIHPRQVASSLSNESCSNLSKCIKEVIEKAIEVGAESSQYPTNW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL+G K GKP K+ +
Sbjct: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSLDVKETGKPNKRQASKKVR 300
Query: 301 KDDDKYNSGDESESDGE-EIAENVKSKKRQKLGGQVKQPSPRKRKSKESDTEDDDGGNDD 359
DDD E ++GE + +VKSKK K G + ++ K K+S D+D D
Sbjct: 301 VDDDT-----EKPTNGEVDDLGSVKSKKGTKAGAKGRK----PSKKKKSGGSDED--KDS 349
Query: 360 DGGGSDDNAEEAPKTKSGKVTKNKQAKAVTTSKEKVIS-QKGKPSKKKAK 408
G+D ++++ K G V KQA S +V S Q +K+KAK
Sbjct: 350 SDVGTDYDSDQVEKKNPGNVASRKQAGGEKQSNRRVQSNQTSWSAKRKAK 399
>gi|357455291|ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
gi|355486974|gb|AES68177.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
Length = 424
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/438 (63%), Positives = 322/438 (73%), Gaps = 44/438 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EE+CIGKKI K I+ADDNKVIDGVS +FEASV+GK I++A RKGK
Sbjct: 1 MPELPEVEAARRAVEENCIGKKITKCIVADDNKVIDGVSREEFEASVVGKKIVAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+WL+LDSPPFPSFQFGM GA+YIKGVAVT+YKRSAV D DEWPSKYSKFF++LDDGLEL
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDEDEWPSKYSKFFIQLDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFA+VRLL DPTSVPPISELGPDAL + MT+DEFT+ L KKK IKALLLDQSY
Sbjct: 121 SFTDKRRFARVRLLKDPTSVPPISELGPDALFDFMTLDEFTERLHKKKTEIKALLLDQSY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA-------------- 226
ISGIGNWVADEVLYQA+IHP Q A SLS ESC+TL KCIKEVI+ A
Sbjct: 181 ISGIGNWVADEVLYQARIHPRQIASSLSGESCSTLYKCIKEVIQFAVEVDADCSRFPLEW 240
Query: 227 --------------LEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYV 272
+EVGADSSQ+P+NWIFHSREKKPGKAFVDGK I+FITAGGRTTAYV
Sbjct: 241 LFHFRWGKKPGKISVEVGADSSQYPTNWIFHSREKKPGKAFVDGKTIEFITAGGRTTAYV 300
Query: 273 PELQKLNGVQAAKAVGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLG 332
PELQKL+G Q K GK R +A K + S DDD + DE+ E++KSKK K G
Sbjct: 301 PELQKLSGSQVLKETGKLRGKASK-KSSVDDDNNDGADEN-------LESLKSKKGTKAG 352
Query: 333 GQVKQPSPRKRKSKESDTEDDDGGNDDDGGGSD-DNAEEAPKTKSGKVTKNKQAKAVTTS 391
+ K+ SK TE+ D ND D G + D++++ K K G T KQAK S
Sbjct: 353 AKAKK------PSKRKKTEESDDDNDGDAGTDNYDDSDQVEKKKPGSGTNRKQAKGEKQS 406
Query: 392 KEKVI-SQKGKPSKKKAK 408
K+ V +Q + ++ KAK
Sbjct: 407 KKSVQGNQSSRSTRSKAK 424
>gi|3820620|gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
thaliana]
Length = 390
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/286 (84%), Positives = 260/286 (90%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEVIEKA+EV ADSSQFPSNW
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSNW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
IFH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G A KA
Sbjct: 241 IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKA 286
>gi|400261073|pdb|3TWL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fpg
gi|400261074|pdb|3TWM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fpg
gi|400261075|pdb|3TWM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Fpg
Length = 310
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/304 (81%), Positives = 268/304 (88%), Gaps = 2/304 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEVIEKA+EV ADSSQFPSNW
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSNW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G A KA + A +G
Sbjct: 241 IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKAAK--VRPAKRGVKP 298
Query: 301 KDDD 304
K+DD
Sbjct: 299 KEDD 302
>gi|449468940|ref|XP_004152179.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Cucumis
sativus]
gi|449513447|ref|XP_004164328.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Cucumis
sativus]
Length = 402
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/416 (65%), Positives = 313/416 (75%), Gaps = 22/416 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEEHC+GK I K++IADD KVIDGVS SDFEAS+LGK ILSAHRKGK
Sbjct: 1 MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+LWL LDSPPFP+F FGM GAIYIKGVAVT YKRS V D DEWPSKYSKFFVELDDG++L
Sbjct: 61 HLWLCLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKV LL DP SVPPIS+LGPDALLEPM +DEF +SL KKK+ IK LLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLKKKKLAIKTLLLDQSY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNWVADEVLYQA+IHP Q+A +LSKESCA L K I+EVIEKALEVGADSS+FP+NW
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVIEKALEVGADSSRFPNNW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFHSREKKPGKAFVDGK+I FIT GGRT+A+VPELQKL G + PK ++S
Sbjct: 241 IFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQKLTGAE------------PKNQNS 288
Query: 301 KDDDKYNSGDESESDGEEIAENVKS---KKRQKLGGQVKQPSPRKRKSKESDTEDDDGGN 357
K N ESDGE +++ K+ K++ K G+ K+PS RK KS++ D D++ N
Sbjct: 289 KRKGNDNKKMNDESDGELVSKTKKTADIKQKPKPKGRSKKPSKRKSKSEDDDGSDEEAEN 348
Query: 358 DDDGGGSDDNAEEAPKTKSGKVTKNKQAKAVTTSKEKVISQKGKPS-----KKKAK 408
DD DDN K K G T Q + +K + Q + S +KKAK
Sbjct: 349 DD--ASDDDNGRPEGKKKVGTKTNIGQRFDAASEPDKSLKQTVRSSQIGRRRKKAK 402
>gi|18404050|ref|NP_564608.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
gi|5903053|gb|AAD55612.1|AC008016_22 Identical to gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA
glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
comes from this gene [Arabidopsis thaliana]
gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis thaliana]
gi|195947437|gb|ACG58696.1| At1g52500 [Arabidopsis thaliana]
gi|332194693|gb|AEE32814.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
Length = 390
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/340 (76%), Positives = 285/340 (83%), Gaps = 5/340 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEVIEKA+EV ADSSQFPS W
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSYW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G A KA K P
Sbjct: 241 IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKAA----KVRPAKRGV 296
Query: 301 KDDDKYNSGDESESDGEEIAENVKSKKRQK-LGGQVKQPS 339
K + G+E E + E+ E+ KSKK QK GG+ K+P+
Sbjct: 297 KPKEDDGDGEEDEQETEKEDESAKSKKGQKPRGGRGKKPA 336
>gi|400261071|pdb|3TWK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fpg
gi|400261072|pdb|3TWK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Fpg
Length = 297
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/279 (84%), Positives = 254/279 (91%)
Query: 2 PELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKN 61
PELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGKN
Sbjct: 2 PELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGKN 61
Query: 62 LWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELS 121
LWL LDSPPFPSFQFG GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLELS
Sbjct: 62 LWLELDSPPFPSFQFGXAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLELS 121
Query: 122 FTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYI 181
FTDKRRFAKVRLL +PTSV PISELGPDALLEP TVDEF +SL+KKKITIK LLLDQ YI
Sbjct: 122 FTDKRRFAKVRLLANPTSVSPISELGPDALLEPXTVDEFAESLAKKKITIKPLLLDQGYI 181
Query: 182 SGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWI 241
SGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEVIEKA+EV ADSSQFPSNWI
Sbjct: 182 SGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSNWI 241
Query: 242 FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
FH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G
Sbjct: 242 FHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYG 280
>gi|224134470|ref|XP_002327413.1| predicted protein [Populus trichocarpa]
gi|222835967|gb|EEE74388.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/296 (82%), Positives = 268/296 (90%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEEHCIGKKI K+IIADD+KVIDGVS SDF A+++GK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEEHCIGKKIKKAIIADDSKVIDGVSPSDFVAALVGKTIVSALRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL+LDSPPFPSFQFGM GA+YIKGVAVT+YKRSAV D+DEWPSKYSKFFV+LDDGLEL
Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDSDEWPSKYSKFFVQLDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL DP S PPISELGPDALLEPMTVDE SLSKKK+ IKALLLDQS+
Sbjct: 121 SFTDKRRFAKVRLLEDPASKPPISELGPDALLEPMTVDELHGSLSKKKVAIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+SGIGNW+ADEVLYQA+IHPLQ A SLS+ES ATL KCIKEVIEKA+EVGADSSQFP+NW
Sbjct: 181 VSGIGNWIADEVLYQARIHPLQIASSLSRESSATLHKCIKEVIEKAVEVGADSSQFPNNW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPK 296
IFHSREKK K F+DGK+IDFI AGGRTTAYVP LQKLNG QA KAVGKP+ + K
Sbjct: 241 IFHSREKKSKKTFIDGKEIDFIVAGGRTTAYVPGLQKLNGNQAGKAVGKPKARTSK 296
>gi|326499279|dbj|BAK06130.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/385 (59%), Positives = 292/385 (75%), Gaps = 11/385 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR A+EEHC+GK+I++ A+D KVIDGV+ S EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEAARLALEEHCVGKRILRCSAAEDTKVIDGVAPSRLEAALVGRTIAAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPP+PSFQFGM GAIYIKGV +++YKRSAV T+EWPSKYSK FVELDDGLE
Sbjct: 61 NLWLVLDSPPYPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPSKYSKLFVELDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+RLL++P +VPPISELGPDAL EPM +DEF S +K IK+LLLDQS+
Sbjct: 121 SFTDKRRFAKIRLLDNPEAVPPISELGPDALCEPMQLDEFVQSFGRKNAPIKSLLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+SGIGNW+ADEVLYQA+IHP+QT+ +SKE C L +CIKEVIEK++EVGADS++FP NW
Sbjct: 181 MSGIGNWMADEVLYQARIHPMQTSSKISKEKCKALHRCIKEVIEKSVEVGADSNEFPENW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFHSREKKPGKAFVDGKKIDF+T GGRT+AYVPELQ L+G AA A ++ KG D+
Sbjct: 241 IFHSREKKPGKAFVDGKKIDFVTVGGRTSAYVPELQMLDGADAAAA-----NRSKKGRDN 295
Query: 301 KDDDKYNSGDESESDGEEIA-ENVKSKKRQKLGGQVKQPSPRKRKSKESDTEDDDGGNDD 359
K ++ N G S+ ++ + E K+ ++Q+ +V++ P KR +K +D G
Sbjct: 296 KVEE--NVGKTSKKGQKKASKEGGKAAQKQEEEDEVEESKPAKRGTKRPAKKD---GRSP 350
Query: 360 DGGGSDDNAEEAPKTKSGKVTKNKQ 384
D GG +E P + + + K+
Sbjct: 351 DAGGYGGEDDEEPVVAAKRPQRKKR 375
>gi|218200905|gb|EEC83332.1| hypothetical protein OsI_28720 [Oryza sativa Indica Group]
Length = 415
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 260/329 (79%), Gaps = 9/329 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWP KYSK V +DDGLE
Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EVIEK+LEVG +SSQ+P NW
Sbjct: 181 ISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFHSREKKPGKAFV+GKKIDFIT GGRT+AYVPELQKL+G+ A A + + S
Sbjct: 241 IFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPELQKLDGIDAT---------ASRAKIS 291
Query: 301 KDDDKYNSGDESESDGEEIAENVKSKKRQ 329
K+ K N D EE A+ K ++Q
Sbjct: 292 KEQSKSNKAAREVDDDEEEAKPAKRGRKQ 320
>gi|222640316|gb|EEE68448.1| hypothetical protein OsJ_26828 [Oryza sativa Japonica Group]
Length = 415
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 260/329 (79%), Gaps = 9/329 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWP KYSK V +DDGLE
Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EVIEK+LEVG +SSQ+P NW
Sbjct: 181 ISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFHSREKKPGKAFV+GKKIDFIT GGRT+AYVPELQKL+G+ A A + + S
Sbjct: 241 IFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPELQKLDGIDAT---------ASRAKIS 291
Query: 301 KDDDKYNSGDESESDGEEIAENVKSKKRQ 329
K+ K N D EE A+ K ++Q
Sbjct: 292 KEQSKSNKAAREVDDDEEEAKPAKRGRKQ 320
>gi|357145554|ref|XP_003573683.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Brachypodium
distachyon]
Length = 448
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/283 (72%), Positives = 243/283 (85%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR A+EEHC+GK+IV+ ADD KVIDG++ S EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEAARLALEEHCVGKRIVRCSAADDTKVIDGIAPSQLEAALVGRTIAAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWPSKYSK FVELDDGLE
Sbjct: 61 NLWLVLDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPSKYSKLFVELDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+RLL++P ++PPISELGPDAL +PM +D+F SL +K + IK+LLLDQS
Sbjct: 121 SFTDKRRFAKIRLLDNPEAIPPISELGPDALFDPMQLDDFVQSLGRKNVPIKSLLLDQSI 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+SGIGNW+ADEVLY A+IHP+QTA +SKE L +CIKEVIEK++EVGADSS+FP +W
Sbjct: 181 MSGIGNWIADEVLYLARIHPMQTASKISKEKYKALHRCIKEVIEKSVEVGADSSEFPQDW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQA 283
IFHSREKKPGKAFVDGKKIDFIT GGRT+AYVPELQ L+G A
Sbjct: 241 IFHSREKKPGKAFVDGKKIDFITVGGRTSAYVPELQMLDGADA 283
>gi|357117165|ref|XP_003560344.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Brachypodium
distachyon]
Length = 402
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/400 (58%), Positives = 289/400 (72%), Gaps = 33/400 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+E HC+G++I + +ADD KV+ S FE +++G+ I++A RKGK
Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVSTSRVAFERAMVGRTIVAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWLRLD+PPFPSFQFGM GAIYIKGVAVT YKRSAV DEWPSKYSKFFVELDDGLE
Sbjct: 61 NLWLRLDAPPFPSFQFGMAGAIYIKGVAVTNYKRSAVSTADEWPSKYSKFFVELDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFA+VRL +DP +VPPISELGPDAL EPM+VD F DSLS+KKI IKALLLDQS+
Sbjct: 121 SFTDKRRFARVRLFDDPETVPPISELGPDALFEPMSVDNFVDSLSRKKIGIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEV YQ++IHPLQ A SLS+ESC L K IKEV++ A+EV AD +FP W
Sbjct: 181 ISGIGNWIADEVFYQSRIHPLQIASSLSRESCEALHKSIKEVVKYAVEVDADCDRFPVEW 240
Query: 241 IFHSRE-KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGED 299
+FH R KKPGK VDGK+I+FITAGGRTTAYVP+LQKL G Q+ K V A G+
Sbjct: 241 LFHHRWGKKPGK--VDGKEIEFITAGGRTTAYVPQLQKLTGTQSNKMVA-----ANPGQL 293
Query: 300 SKDDDKYNSGDESESDGEEIAENVKSKKR----QKLGGQVKQ-----PSPRKRKSK---- 346
S D D N E +DGE+ +++K +KR + + GQ K+ PS + RK+
Sbjct: 294 SADGDAAN---EVLADGED--DDLKPRKRVATFRAVRGQQKKDAISAPSRKTRKNVGGKE 348
Query: 347 -------ESDTEDDDGGNDDDGGGSDDNAEEAPKTKSGKV 379
E++ D G N +D++ + P ++GK+
Sbjct: 349 KPSIEHIENEDVDTMGPNKIGSTSNDEHGLDKPTARAGKI 388
>gi|115475806|ref|NP_001061499.1| Os08g0304900 [Oryza sativa Japonica Group]
gi|50508157|dbj|BAD30940.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica
Group]
gi|50508168|dbj|BAD30974.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica
Group]
gi|113623468|dbj|BAF23413.1| Os08g0304900 [Oryza sativa Japonica Group]
gi|215693253|dbj|BAG88635.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 409
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/329 (64%), Positives = 254/329 (77%), Gaps = 15/329 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWP KYSK V +DDGLE
Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EVIEK+LEVG +SSQ+P NW
Sbjct: 181 ISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFHSREKKP GKKIDFIT GGRT+AYVPELQKL+G+ A A + + S
Sbjct: 241 IFHSREKKP------GKKIDFITVGGRTSAYVPELQKLDGIDAT---------ASRAKIS 285
Query: 301 KDDDKYNSGDESESDGEEIAENVKSKKRQ 329
K+ K N D EE A+ K ++Q
Sbjct: 286 KEQSKSNKAAREVDDDEEEAKPAKRGRKQ 314
>gi|258644410|dbj|BAI39671.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Indica
Group]
Length = 409
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/329 (64%), Positives = 254/329 (77%), Gaps = 15/329 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGV +++YKRSAV T+EWP KYSK V +DDGLE
Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPLKYSKLLVVMDDGLEF 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK IKALLLDQS+
Sbjct: 121 SFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+SGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EVIEK+LEVG +SSQ+P NW
Sbjct: 181 VSGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFHSREKKP GKKIDFIT GGRT+AYVPELQKL+G+ A A + + S
Sbjct: 241 IFHSREKKP------GKKIDFITVGGRTSAYVPELQKLDGIDAT---------ASRAKIS 285
Query: 301 KDDDKYNSGDESESDGEEIAENVKSKKRQ 329
K+ K N D EE A+ K ++Q
Sbjct: 286 KEQSKSNKAAREVDDDEEEAKPAKRGRKQ 314
>gi|222635968|gb|EEE66100.1| hypothetical protein OsJ_22131 [Oryza sativa Japonica Group]
Length = 405
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/409 (55%), Positives = 288/409 (70%), Gaps = 22/409 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD--FEASVLGKAILSAHRK 58
MPELPEVEAARRA+E HC+G++I + +ADD KV+ + FE +++G+ I++A R+
Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GKNLWLRLD+PPFPSFQFGM GAIYIKGV VT+YKRS V TDEWPSKYSKFFV+LDDGL
Sbjct: 61 GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDGL 120
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
E SFTDKRRFA+VRL DP +VPPISELGPDAL EPM+ D F DSLS+KKI IKALLLDQ
Sbjct: 121 EFSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQ 180
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S+ISGIGNW+ADEVLYQ++ HPLQ A SLS+ESC L + I+EV++ A+EV AD FP
Sbjct: 181 SFISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHQSIQEVVKYAVEVDADCDCFPV 240
Query: 239 NWIFHSRE-KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKG 297
W+FH R KKPGK V+G+KI+FITAGGRTTAYVP+LQKL G+Q++K V +Q +
Sbjct: 241 EWLFHHRWGKKPGK--VNGQKIEFITAGGRTTAYVPQLQKLTGMQSSKVVIANPEQVAEN 298
Query: 298 EDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSKESDTEDDDGGN 357
+D+K+ D +D E+ A+N+ +KKR + R S +GG
Sbjct: 299 DDAKEID---------TDPED-ADNLNTKKRGATSRVARGKQKRDAIGALSRKTRKNGGG 348
Query: 358 DDDGGG--SDDNAEEAPKTKSGKVTKNKQAKAV-----TTSKEKVISQK 399
+ G S+D+ E A K +K ++A V T SK + I Q+
Sbjct: 349 KEKPGSDYSEDDGETAEPNKVSTSSKGEKADPVRRSSRTASKPRQIIQR 397
>gi|326507936|dbj|BAJ86711.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/413 (56%), Positives = 287/413 (69%), Gaps = 26/413 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA+E HC+G++I + +ADD KV+ + FE +++G+ IL+A R+G
Sbjct: 1 MPELPEVEAARRALEAHCVGRRITRCAVADDPKVVVAAAGRVAFERAMVGRTILAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWLRLD+PPFPSFQFGM GAIYIKGVAVT+YKRSAV D+WPSKYSKFFVELDDGLE
Sbjct: 61 KNLWLRLDAPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNSADDWPSKYSKFFVELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
SFTDKRRFA+VRL +DP +VPPISELGPDAL EPM+VD F DSLSKKKI IKALLLDQS
Sbjct: 121 FSFTDKRRFARVRLFDDPETVPPISELGPDALFEPMSVDNFVDSLSKKKIGIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ISGIGNW+ADEVLYQ+K HPLQ A SL++ESC L + I+EV++ A++V AD +FP
Sbjct: 181 FISGIGNWIADEVLYQSKTHPLQIASSLTRESCEALHQSIQEVVKYAVDVDADCDRFPVE 240
Query: 240 WIFHSR-EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQA-AKAVGKPRKQAPKG 297
W+FH R KKPGK VDGKKI+FITAGGRTTAYVPELQKL G Q+ K V PR+ + G
Sbjct: 241 WLFHHRWGKKPGK--VDGKKIEFITAGGRTTAYVPELQKLTGTQSNKKVVASPRQVSEDG 298
Query: 298 ---------EDSKDDD-----KYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKR 343
E DDD + + +E ++ + SK K+ G K+PS
Sbjct: 299 DAKEAGAEVEVEADDDLKPRKRVPTFKAAEGQQKKDVISAPSKITSKIAGGKKKPS---I 355
Query: 344 KSKESDTEDDDGGNDDDGGGSDDNAEEAPKTK----SGKVTKNKQAKAVTTSK 392
K D G N G +D++ + P K SG+ T+N T+K
Sbjct: 356 KHGSKDDVKTTGPNKAGAGSNDEHGLDEPTAKMRKVSGRGTRNSSKNKPKTTK 408
>gi|115469160|ref|NP_001058179.1| Os06g0643600 [Oryza sativa Japonica Group]
gi|51535473|dbj|BAD37370.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa
Japonica Group]
gi|51535507|dbj|BAD37426.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa
Japonica Group]
gi|113596219|dbj|BAF20093.1| Os06g0643600 [Oryza sativa Japonica Group]
gi|215694501|dbj|BAG89494.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 400
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/396 (56%), Positives = 282/396 (71%), Gaps = 17/396 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD--FEASVLGKAILSAHRK 58
MPELPEVEAARRA+E HC+G++I + +ADD KV+ + FE +++G+ I++A R+
Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GKNLWLRLD+PPFPSFQFGM GAIYIKGV VT+YKRS V TDEWPSKYSKFFV+LDDGL
Sbjct: 61 GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDGL 120
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
E SFTDKRRFA+VRL DP +VPPISELGPDAL EPM+ D F DSLS+KKI IKALLLDQ
Sbjct: 121 EFSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQ 180
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S+ISGIGNW+ADEVLYQ++ HPLQ A SLS+ESC L + I+EV++ A+EV AD FP
Sbjct: 181 SFISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHQSIQEVVKYAVEVDADCDCFPV 240
Query: 239 NWIFHSR-EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKG 297
W+FH R KKPGK V+G+KI+FITAGGRTTAYVP+LQKL G+Q++K V +Q +
Sbjct: 241 EWLFHHRWGKKPGK--VNGQKIEFITAGGRTTAYVPQLQKLTGMQSSKVVIANPEQVAEN 298
Query: 298 EDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSKESDTEDDDGGN 357
+D+K+ D +D E+ A+N+ +KKR + R S +GG
Sbjct: 299 DDAKEID---------TDPED-ADNLNTKKRGATSRVARGKQKRDAIGALSRKTRKNGGG 348
Query: 358 DDDGGG--SDDNAEEAPKTKSGKVTKNKQAKAVTTS 391
+ G S+D+ E A K +K ++A V S
Sbjct: 349 KEKPGSDYSEDDGETAEPNKVSTSSKGEKADPVRRS 384
>gi|297743498|emb|CBI36365.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/278 (73%), Positives = 233/278 (83%), Gaps = 8/278 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+WL+LDSPPFPSFQFGM GA+YIKGVAVT+YKRSAVKDTDEWPSKYSK F+ELDDGLEL
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL DP SVPPISELGPDALLEPMT+DEF SLSKKKI IKALLLDQSY
Sbjct: 121 SFTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
I+GIGNW+ADEVLY A+IHPLQ A SL++ESC TL +CIK+VI+ A+EV A+ S FP W
Sbjct: 181 IAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVIQYAVEVDAECSLFPLEW 240
Query: 241 IFHSR--------EKKPGKAFVDGKKIDFITAGGRTTA 270
+FH R + K G+ V I F R+ A
Sbjct: 241 LFHFRWGKKSLRKQWKLGQIVVSFLVIGFSIPAKRSLA 278
>gi|242096492|ref|XP_002438736.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor]
gi|241916959|gb|EER90103.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor]
Length = 399
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/330 (63%), Positives = 257/330 (77%), Gaps = 14/330 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + +ADD+KV+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDDKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWL+LD+PPFPSFQFGM GAIYIKGV VT YKRS V +EWPSKYSKFF ELDDGLE
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGVPVTNYKRSVVNSEEEWPSKYSKFFAELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
SFTDKRRFA+VRL DP +VPPISELGPDAL EPM+VD+F DSL +KKI IKALLLDQS
Sbjct: 121 FSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSVDDFLDSLGRKKIGIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC L + I+EV++ A+EV AD +FP
Sbjct: 181 FISGIGNWIADEVLYQSRIHPLQIASNLPRESCEALHRSIQEVVKYAVEVDADMDRFPKE 240
Query: 240 WIFHSRE-KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGE 298
W+FH R KKPGK V+GKKI+FITAGGRTTAYVP+LQKL G+Q++K V +Q +
Sbjct: 241 WLFHHRWGKKPGK--VNGKKIEFITAGGRTTAYVPQLQKLIGIQSSKMVSANLEQLAENV 298
Query: 299 DSKDDDKYNSGDESESDGEEIAENVKSKKR 328
D+KD SG E E A+ +K KKR
Sbjct: 299 DTKD-----SGTEGED-----ADILKPKKR 318
>gi|30695252|ref|NP_849798.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
gi|5903054|gb|AAD55613.1|AC008016_23 Identical to gb|AB010690 mutM homologue-2 (formamidopyrimidine-DNA
glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
comes from this gene [Arabidopsis thaliana]
gi|3550983|dbj|BAA32703.1| AtMMH-2 [Arabidopsis thaliana]
gi|3820622|gb|AAC97953.1| putative formamidopyrimidine-DNA glycosylase 2 [Arabidopsis
thaliana]
gi|332194694|gb|AEE32815.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
Length = 274
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/258 (79%), Positives = 226/258 (87%), Gaps = 3/258 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEVI+ A++V ADS +FP W
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIQHAVQVNADSKEFPVEW 240
Query: 241 IFHSRE-KKPGKAFVDGK 257
+FH R KK GK V+GK
Sbjct: 241 LFHFRWGKKAGK--VNGK 256
>gi|226498176|ref|NP_001141023.1| uncharacterized protein LOC100273102 [Zea mays]
gi|194699240|gb|ACF83704.1| unknown [Zea mays]
gi|413943558|gb|AFW76207.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 384
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/310 (63%), Positives = 244/310 (78%), Gaps = 9/310 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + +ADD KV+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWL+LD+PPFPSFQFGM GAIYIKG+ VT YKRS V +EWPSK+SKFF ELDDGLE
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRSVVNSEEEWPSKHSKFFAELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
SFTDKRRFA+VRL DP ++PPISELGPDAL EPM+VD F DSL +KKI IKALLLDQS
Sbjct: 121 FSFTDKRRFARVRLFEDPETLPPISELGPDALFEPMSVDSFLDSLGRKKIGIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC L + I+EV++ A+EV AD +FP
Sbjct: 181 FISGIGNWIADEVLYQSRIHPLQIASNLPRESCEALHQSIEEVVKYAVEVDADMDRFPKE 240
Query: 240 WIFHSRE-KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAV-----GKPRKQ 293
W+FH R KKPGK VDGKKI+FITAGGRTTAYVP+LQKL G Q++K + G +
Sbjct: 241 WLFHHRWGKKPGK--VDGKKIEFITAGGRTTAYVPQLQKLVGTQSSKTISVAENGDAKDS 298
Query: 294 APKGEDSKDD 303
+GED+ D
Sbjct: 299 GTEGEDADAD 308
>gi|34015259|gb|AAQ56451.1| putative glycosylase [Oryza sativa Japonica Group]
gi|34015285|gb|AAQ56476.1| putative glycosylase [Oryza sativa Japonica Group]
Length = 405
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/338 (58%), Positives = 240/338 (71%), Gaps = 37/338 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARRA+EEHC+GK+IV+ ADD KVIDGV+ EA+++G+ I +A RKGK
Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGM--------TGAIYI-KGVAVTQYKRSAVKDTDEWPSKYSKFF 111
NLWL LDSPPFPSFQFG G Y+ +G Q ++
Sbjct: 61 NLWLALDSPPFPSFQFGFLLYRMPIRNGWSYLHQGCGTEQIQK----------------- 103
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
+DDGLE SFTDKRRFAK+R L++P +VPPISELGPDAL EP+ +D+F +SLS+KK I
Sbjct: 104 --MDDGLEFSFTDKRRFAKIRFLDNPEAVPPISELGPDALFEPLHLDDFVESLSRKKAPI 161
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
KALLLDQS+ISGIGNW+ADEVLYQA+IHP+QTA +SKE C L +CI EVIEK+LEVG
Sbjct: 162 KALLLDQSFISGIGNWIADEVLYQARIHPMQTASMISKEKCKALHQCIIEVIEKSLEVGC 221
Query: 232 DSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPR 291
+SSQ+P NWIFHSREKKPGKAFV+GKKIDFIT GGRT+AYVPELQKL+G+ A
Sbjct: 222 NSSQYPENWIFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPELQKLDGIDAT------- 274
Query: 292 KQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQ 329
A + + SK+ K N D EE A+ K ++Q
Sbjct: 275 --ASRAKISKEQSKSNKAAREVDDDEEEAKPAKRGRKQ 310
>gi|168061202|ref|XP_001782579.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665899|gb|EDQ52568.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 496
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 190/397 (47%), Positives = 264/397 (66%), Gaps = 17/397 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+AA+ + C+G IVK+++A+D+KVIDGV+ + + ++LGK IL HRKGK
Sbjct: 1 MPELPEVQAAKVLVGSRCLGGVIVKALVANDSKVIDGVTPAALQKALLGKKILETHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+LWL+LDSPP+PSFQFGM+GA+ +KGV QYK S V DT+E+PSKY K ++LD G+E+
Sbjct: 61 HLWLQLDSPPYPSFQFGMSGAVVVKGVKGLQYKSSKVDDTEEFPSKYWKVHLKLDTGVEV 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+FTDKRRFA+VRLL+DP PPISELG DA LE + +FT++L KK IKALLLDQS+
Sbjct: 121 AFTDKRRFARVRLLDDPAKEPPISELGLDAYLELPSAKDFTEALKTKKGAIKALLLDQSF 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
++GIGNWV DEVLYQ+KIHP Q+A SL E C L I+ V++KA+ V ADS +FP +W
Sbjct: 181 LAGIGNWVGDEVLYQSKIHPEQSANSLKDEECTRLHTAIRVVLDKAVSVHADSEKFPRSW 240
Query: 241 IFHSR-EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGED 299
IFH R ++KPGK + G +I+ +T GGRT+AYVP +QK +G + A R++A D
Sbjct: 241 IFHHRWDRKPGK--IRGNQIETVTVGGRTSAYVPNIQKYSGRELKGA----RRKAAIAHD 294
Query: 300 SKDDDKYNSGDESESDGEEIAE-NVKSKKRQKLGGQVKQPSPRKRKSKESDTEDDDGGND 358
D+ + + GE A+ +K++ + G P K K K + +E G D
Sbjct: 295 IPHDETDTDENVDPAVGEVAADKEMKTQPKHSRG------RPPKHKQKPTSSE---GKVD 345
Query: 359 DDGGGSDDNAEEAPKTKSGKVTKNKQAKAVTTSKEKV 395
+ G++ +E + + KV + Q K +T EK
Sbjct: 346 TEEIGTESLSEPKRRGRPPKVKTDTQTKVLTKEGEKT 382
>gi|413943559|gb|AFW76208.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 281
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 173/266 (65%), Positives = 213/266 (80%), Gaps = 6/266 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + +ADD KV+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWL+LD+PPFPSFQFGM GAIYIKG+ VT YKRS V +EWPSK+SKFF ELDDGLE
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRSVVNSEEEWPSKHSKFFAELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
SFTDKRRFA+VRL DP ++PPISELGPDAL EPM+VD F DSL +KKI IKALLLDQS
Sbjct: 121 FSFTDKRRFARVRLFEDPETLPPISELGPDALFEPMSVDSFLDSLGRKKIGIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC L + I+EV++ A+EV AD +FP
Sbjct: 181 FISGIGNWIADEVLYQSRIHPLQIASNLPRESCEALHQSIEEVVKYAVEVDADMDRFPKE 240
Query: 240 WIFHSRE-KKPGKAFVDGKKIDFITA 264
W+FH R KKPGK VDGK F+TA
Sbjct: 241 WLFHHRWGKKPGK--VDGKT--FLTA 262
>gi|168050039|ref|XP_001777468.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671199|gb|EDQ57755.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/258 (58%), Positives = 197/258 (76%), Gaps = 4/258 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAA+R ++ HC+G IVK+++ +D KVIDGV+ + + S+ GK ILS HRKGK
Sbjct: 1 MPELPEVEAAKRLLDSHCLGATIVKAVVDNDTKVIDGVTPAALQESLTGKKILSTHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE-WPSKYSKFFVELDDGLE 119
+LWL+LDSPP+PSFQFGM+GA+ IKGV QY+ S V D +E +P+ YSK + L G+E
Sbjct: 61 HLWLKLDSPPWPSFQFGMSGAVIIKGVKGPQYRSSKVGDEEEAFPTTYSKVHLVLSTGVE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L+FTDKRRFA+VRLL DP+ VPPISELG DA LE + ++ +++ KK ++KALLLDQS
Sbjct: 121 LAFTDKRRFARVRLLEDPSKVPPISELGFDAYLELPSAEQLIEAMKTKKGSVKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+I+GIGNWV DEVLY AKIHP Q+A SL +E L ++EV+EKA+ V ADS QFP +
Sbjct: 181 FIAGIGNWVGDEVLYHAKIHPEQSASSLKEEEVTRLHASVREVLEKAISVDADSEQFPRS 240
Query: 240 WIFHSR-EKKPGKAFVDG 256
W++H R +KKPG +DG
Sbjct: 241 WLYHHRWDKKPG--MIDG 256
>gi|302771624|ref|XP_002969230.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii]
gi|300162706|gb|EFJ29318.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii]
Length = 268
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/251 (59%), Positives = 186/251 (74%), Gaps = 2/251 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+E HC G I ++ +ADD VI+G++ D + ++ K I++AHRKGK
Sbjct: 1 MPELPEVEAARRAVELHCKGL-ICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL LD PP FQFGM GA+Y+KGV T+Y RSAVKD DEWPSKYSK + LD G+E+
Sbjct: 60 QLWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEM 119
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFA+VRL+ DP PPISELGPDA E F DS++KKK IKA+LLDQS+
Sbjct: 120 SFTDKRRFARVRLIQDPRLSPPISELGPDAYTELPDETTFADSVAKKKTAIKAVLLDQSF 179
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
I+GIGNW+ADEVLYQ++IHP Q A +L+ C L IKEV+ A++V AD +FP +W
Sbjct: 180 IAGIGNWIADEVLYQSRIHPEQPASTLTAIDCERLRGAIKEVVMTAVDVDADLERFPRDW 239
Query: 241 IFHSRE-KKPG 250
+FH R KKPG
Sbjct: 240 LFHHRWGKKPG 250
>gi|302754324|ref|XP_002960586.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii]
gi|300171525|gb|EFJ38125.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii]
Length = 268
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 150/251 (59%), Positives = 185/251 (73%), Gaps = 2/251 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+E HC G I ++ +ADD VI+G++ D + ++ K I++AHRKGK
Sbjct: 1 MPELPEVEAARRAVELHCKGL-ICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL LD PP FQFGM GA+Y+KGV T+Y RSAVKD DEWPSKYSK + LD G+E+
Sbjct: 60 QLWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEM 119
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFA+VRLL DP PPISELGPDA E F DS++KKK IKA+LLDQ +
Sbjct: 120 SFTDKRRFARVRLLQDPRLSPPISELGPDAYTELPDETTFADSVAKKKTAIKAVLLDQVF 179
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
I+GIGNW+ADEVLYQ++IHP Q A +L+ C L IKEV+ A++V AD +FP +W
Sbjct: 180 IAGIGNWIADEVLYQSRIHPEQPASTLTAIDCERLRGAIKEVVMTAVDVDADLERFPRDW 239
Query: 241 IFHSRE-KKPG 250
+FH R KKPG
Sbjct: 240 LFHHRWGKKPG 250
>gi|218198635|gb|EEC81062.1| hypothetical protein OsI_23872 [Oryza sativa Indica Group]
Length = 422
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 226/352 (64%), Gaps = 26/352 (7%)
Query: 51 AILSAHRKGKNLWLRLDSPPFPSFQFGMTG---AIYIKGVA-----VTQYKRSAVKDTDE 102
++ S H + N+W L F F FG+T Y VA ++ RS V TD+
Sbjct: 76 SLFSWHNETINIWTHLLG--FVLF-FGLTVLHLGQYFPQVADLIGHLSWDGRSVVSSTDD 132
Query: 103 WPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTD 162
WPSKYSKFFV+LDDGLE SFTDKRRFA+VRL DP +VPPISELGPDAL EPM+ D F D
Sbjct: 133 WPSKYSKFFVQLDDGLEFSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSSDSFAD 192
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
SLS+KKI IKALLLDQS+ISGIGNW+ADEVLYQ++ HPLQ A SLS+ESC L + I+EV
Sbjct: 193 SLSRKKIGIKALLLDQSFISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHQSIQEV 252
Query: 223 IEKALEVGADSSQFPSNWIFHSRE-KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGV 281
++ A+EV AD FP W+FH R KKPGK V+G+KI+FITAGGRTTAYVP+LQKL G+
Sbjct: 253 VKYAVEVDADCDCFPVEWLFHHRWGKKPGK--VNGQKIEFITAGGRTTAYVPQLQKLTGM 310
Query: 282 QAAKAVGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPR 341
Q++K V +Q + +D+K+ D +D E+ A+N+ +KKR + R
Sbjct: 311 QSSKVVIANPEQVAENDDAKEID---------TDPED-ADNLNTKKRGATSRVARGKQKR 360
Query: 342 KRKSKESDTEDDDGGNDDDGGG--SDDNAEEAPKTKSGKVTKNKQAKAVTTS 391
S +GG + G S+D+AE A K +K ++A V S
Sbjct: 361 DAIGALSRKTRKNGGGKEKPGSDYSEDDAETAEPNKVSTSSKGEKADPVRRS 412
>gi|384251140|gb|EIE24618.1| DNA glycosylase/AP lyase [Coccomyxa subellipsoidea C-169]
Length = 373
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/282 (50%), Positives = 191/282 (67%), Gaps = 5/282 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR + HC GK I ++I ADD KVI+GVS + + ++ G+ I+ AHRKGK
Sbjct: 1 MPELPEVEAARVLVHTHCKGKCIEQAIAADDTKVIEGVSPEELQNALRGRTIVDAHRKGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
++WL LD P F GMTG + ++GV + QY +A K DEWP KY K +E D G++
Sbjct: 61 HMWLELDGENPALLFHLGMTGYMVVEGVPIVQY-VNAKKRGDEWPPKYWKVVLETDCGVK 119
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L+F D RRF K+RL DP + PIS+LG D +L + F+ L+K++ ++K LLLDQS
Sbjct: 120 LAFCDPRRFGKIRLQADPENNEPISKLGFDPILSMPDLATFSGMLAKQRRSVKPLLLDQS 179
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ +G+GNWVADE+LYQAKIHP Q A SL + CA L +K V++ A++ GADS +FP
Sbjct: 180 FSAGVGNWVADEILYQAKIHPEQKAASLDEAQCAALHHQMKAVLQTAVDAGADSEKFPKT 239
Query: 240 WIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
W+FH + KK ++G KI+++ GGRTTAYVP LQKL
Sbjct: 240 WLFHQKWGAGKKGPAPRLEGNKIEYMQVGGRTTAYVPALQKL 281
>gi|302845178|ref|XP_002954128.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f.
nagariensis]
gi|300260627|gb|EFJ44845.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f.
nagariensis]
Length = 325
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 198/296 (66%), Gaps = 12/296 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAA+R +E C+GK+I + + A D+KV + S D ++ G+ +++AHRKGK
Sbjct: 1 MPELPEVEAAKRLMERGCVGKRIERVVAAKDDKVFEDASPDDVRRALEGRRVVAAHRKGK 60
Query: 61 NLWLRLDSP--PFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDG 117
LWL LD+P +P FGMTG I ++ + T+YKR + DEWP +++K ++L+ G
Sbjct: 61 YLWLELDNPDGLWPLLHFGMTGGIVVQNMGATKYKRIHLASNPDEWPPRFTKLELDLEGG 120
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKK-----KITIK 172
+++F D RRF +V+LL +P++ P+S+LG D L E +++F ++ K+ + IK
Sbjct: 121 AKVAFVDVRRFGRVKLLANPSAQEPLSKLGFDVLDELPPLEQFIAAVRKRVARAPGLKIK 180
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
ALLLDQ + SGIGNWV DEVLYQA+IHP Q+A SL + A L + I+ V+ +A+E+ AD
Sbjct: 181 ALLLDQEFCSGIGNWVGDEVLYQARIHPEQSAASLGDSALAALRESIRSVVTQAVELEAD 240
Query: 233 SSQFPSNWIFHSR--EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
+FP W+FH R +KPG ++G KI+F+T G RT+A+VP LQKL G + A
Sbjct: 241 VDRFPPEWLFHHRWNSRKPGS--INGHKIEFVTVGSRTSAFVPALQKLQGPRTGAA 294
>gi|168031593|ref|XP_001768305.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680483|gb|EDQ66919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/264 (50%), Positives = 191/264 (72%), Gaps = 4/264 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
M ELPEVEAA+R + HC+G IVK+I+ +D KVIDGV+ + + ++ GK I+SA R+GK
Sbjct: 1 MAELPEVEAAKRLVNCHCLGATIVKAIVDNDTKVIDGVTPAVLQETLTGKKIVSALREGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE-WPSKYSKFFVELDDGLE 119
++WL+LDS P+PS+QF + A +KG +QY+ V D +E +P+ +SK ++LD+G+E
Sbjct: 61 HIWLQLDSRPWPSYQFDTSSAFIVKGAKGSQYRSPKVSDEEEAFPTTHSKVLLQLDNGVE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
++FTDK RF +VRLL++P+ PPISELG DA LE ++FT++L KK ++KALLLDQS
Sbjct: 121 VAFTDKLRFGRVRLLDNPSIAPPISELGFDAYLELPNAEQFTEALKTKKGSVKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
++SGIGNWV DEVL+QAKIHP Q+ SL++E A L I+EV++KA+ V D Q+P +
Sbjct: 181 FLSGIGNWVGDEVLFQAKIHPEQSVNSLTEEQVAKLHTAIREVLDKAVSVDGDKEQYPRS 240
Query: 240 WIFHSR-EKKPGKAFVDGKKIDFI 262
W+ H +KK G +DG + FI
Sbjct: 241 WLCHHLGDKKLG--MIDGIRAIFI 262
>gi|413943560|gb|AFW76209.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
gi|413943561|gb|AFW76210.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 208
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + +ADD KV+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
KNLWL+LD+PPFPSFQFGM GAIYIKG+ VT YKRS V +EWPSK+SKFF ELDDGLE
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRSVVNSEEEWPSKHSKFFAELDDGLE 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
SFTDKRRFA+VRL DP ++PPISELGPDAL EPM+VD F DSL +KKI IKALLLDQ
Sbjct: 121 FSFTDKRRFARVRLFEDPETLPPISELGPDALFEPMSVDSFLDSLGRKKIGIKALLLDQ 179
>gi|367029573|ref|XP_003664070.1| hypothetical protein MYCTH_2139555 [Myceliophthora thermophila ATCC
42464]
gi|347011340|gb|AEO58825.1| hypothetical protein MYCTH_2139555 [Myceliophthora thermophila ATCC
42464]
Length = 391
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 171/296 (57%), Gaps = 16/296 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ + H +GKKI + +DN V G + ++ ++ GK +LSA +
Sbjct: 1 MPEIAEIARVVHYLRLHLVGKKIKTATAVEDNNVFGKVGTTGAEVSRALTGKKVLSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKF-FVEL 114
GK WL LD PP P FGMTG I+IKG YK+ ++ D WP KY KF +
Sbjct: 61 GKYFWLVLDQPPHPVMHFGMTGWIHIKGDRTAYTNYYKKMKPEEMDLWPPKYWKFHLITE 120
Query: 115 DDGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSKKK 168
+ +E++FTD RRF +VRL++ P P+ E G D +++ T D + + +
Sbjct: 121 NPAVEVAFTDPRRFGRVRLVDCPGESIRKFSPLVENGTDPVVDTDVFTEDYLREKMRSRH 180
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+ IKAL+LDQ+ ISGIGNWV DEVLYQAK+HP Q S E L K I+ V + A++
Sbjct: 181 VPIKALILDQTIISGIGNWVGDEVLYQAKLHPEQYCDDFSDEQITRLYKSIRHVCQFAVD 240
Query: 229 VGADSSQFPSNWIFHSREKKPGKAFV----DGKKIDFITAGGRTTAYVPELQKLNG 280
DS QFP +W+FH R +K K V G+K+ F+T GGRT+ YVPE+QK +G
Sbjct: 241 KLGDSDQFPEDWLFHYRWEKGQKGGVGHLPSGEKLAFLTVGGRTSCYVPEIQKKSG 296
>gi|145352879|ref|XP_001420761.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580996|gb|ABO99054.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 277
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/280 (42%), Positives = 164/280 (58%), Gaps = 7/280 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE ARR + + IG I V I DD +D V++ FE ++ G+ I + R
Sbjct: 1 MPELPEVEKARRLVHDLAIGSPISRVHRPIIDDKVFVD-VASGQFERALSGRKITHSKRH 59
Query: 59 GKNLWLRLDS--PPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
GK LW +LD P F FGMTGA +G+ QY S T +WP +++K V ++
Sbjct: 60 GKQLWWQLDGNDALVPCFHFGMTGAFVARGIDGIQYYNSKASGTGDWPPRFAKLVVAFEN 119
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
G+EL+F D RRF K++L+ D V I +LGPD LLE + F ++ IK ++
Sbjct: 120 GVELAFVDPRRFGKIKLVADVAEV--IGQLGPDPLLEMPNEEAFAALWRRRSAPIKTAIM 177
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF 236
DQ I+GIGNW+ADE+LY+A++HP A LS + + EV++ A E +D F
Sbjct: 178 DQKVIAGIGNWMADEILYRARVHPETRANELSSTQLEAIRFRVTEVVKVACEANSDHDLF 237
Query: 237 PSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
P +W+FH R K G A V+G I FI GGRTTA+VP+LQ
Sbjct: 238 PDDWLFHHRWGKTGGAKVNGDAIKFIEVGGRTTAFVPKLQ 277
>gi|299755916|ref|XP_001828971.2| AtMMH-1 [Coprinopsis cinerea okayama7#130]
gi|298411439|gb|EAU92978.2| AtMMH-1 [Coprinopsis cinerea okayama7#130]
Length = 370
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 198/364 (54%), Gaps = 39/364 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ A ++ GK+I K + D V + + +F + + + A R GK
Sbjct: 1 MPELPEVQRAVNTLKHVAKGKRITKVVTYPDPIVFNATTNEEFGKELENRTVSDAKRYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT-DEWPSKYSKFFVELDDGL 118
+L LD P FGMTG +++KGV YK + KD+ D WP ++ KF + L +
Sbjct: 61 VFYLDLDGKGKKPVLHFGMTGMLHVKGVKPMHYKEAPRKDSEDTWPPRFCKFILHLQNPT 120
Query: 119 ---------ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
E++F D RR A++RL P PISELG D LL +++ F+ ++ K+
Sbjct: 121 GSSNGEPETEVAFIDARRLARIRLCTSPMEERPISELGFDPLLSMPSLETFSRTVLKRSC 180
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
IKALLLDQS+ +G+GNWVADEVLY A+IHP Q +L+ E L CI V + A++V
Sbjct: 181 PIKALLLDQSFSAGVGNWVADEVLYHARIHPEQRCNTLTTEQLKNLHHCIVYVCQTAVDV 240
Query: 230 GADSSQFPSNWIFHSREKKPGKAFV-------DGKK--IDFITAGGRTTAYVPELQKLNG 280
AD FP NW+F R K K+F G K I +IT GGRT+AYVPELQ+L+
Sbjct: 241 DADHKLFPENWLFGHRWNKGKKSFSVKPLMLPSGSKATIKWITVGGRTSAYVPELQRLSP 300
Query: 281 VQAAKAVGKPRKQAPKGEDSKDDDKYNSGDES-----ESDGEEIAENVKSKKRQKLGGQV 335
Q+ +D+K + + +G+ +SD EEI++N + +++K
Sbjct: 301 NQS--------------KDTKTEGESEAGESDLTSLVDSDEEEISKNKPAIQKRKAPKST 346
Query: 336 KQPS 339
+QP+
Sbjct: 347 EQPA 350
>gi|320588680|gb|EFX01148.1| formamidopyrimidine-DNA glycosylase [Grosmannia clavigera kw1407]
Length = 365
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 173/303 (57%), Gaps = 26/303 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E + +H +GK+I K+ DD+ V G + + F ASVLGK +LSA +
Sbjct: 1 MPEIAEAARIVHFLRKHLVGKQIKKAAAIDDSNVFGKAGTTGATFAASVLGKKVLSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGV---AVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W+ LDS P P FGMTG I+IKG+ Y + D D WP ++ KF ++ +
Sbjct: 61 GKYFWIVLDSQPHPVMHFGMTGWIHIKGMRTAYTNYYNKMKPGDADLWPPRFWKFHLQAE 120
Query: 116 -----DGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDEFT----- 161
D +EL+FTD RRF +VRL++ P P+ E GPD +++ D FT
Sbjct: 121 ADGAADKVELAFTDPRRFGRVRLIDCPGDRIRQFSPLVENGPDPVVD---ADIFTESFVR 177
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
D++ ++ + IKALLLDQ++ISGIGNWV DEVL+QA++HP Q L I
Sbjct: 178 DTMQRRHVPIKALLLDQAFISGIGNWVGDEVLFQARLHPEQYCDEFDGAQVKQLYTSICH 237
Query: 222 VIEKALEVGADSSQFPSNWIFHSREKKPGKAFV----DGKKIDFITAGGRTTAYVPELQK 277
V A+++ DS +FP +W+FH R K K V G+K+ F+T GGRT+ + P LQK
Sbjct: 238 VCRTAVDLLGDSDRFPDDWLFHYRWGKGSKGAVPQLPGGEKLSFLTVGGRTSCFAPSLQK 297
Query: 278 LNG 280
+G
Sbjct: 298 KSG 300
>gi|58270186|ref|XP_572249.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228507|gb|AAW44942.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 475
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 233/477 (48%), Gaps = 86/477 (18%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++ +I G ++F + G++I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERK 59
Query: 59 GKNLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF ++L
Sbjct: 60 GKTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 EGSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V A+
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAIS 239
Query: 229 VGADSSQFPSNWIFHSR---------------------------------EKKPGKAFVD 255
V ADS FPS+W+F R E K D
Sbjct: 240 VNADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVDGEGGEDVEPEDKEFLELPD 299
Query: 256 GK--KIDFITAGGRTTAYVPELQKL-NGVQ-------AAKAVGKPRKQAPKGEDSKDDDK 305
G I FI GGRTTA V ELQK+ GV+ K G RK+ K E+S + +
Sbjct: 300 GSPATIKFIEVGGRTTALVEELQKMPEGVEIKPKISKGGKRAGAKRKKVAKEEESDEGSE 359
Query: 306 YNSGDESESDGEEIAENVKSKKRQK-----------LGGQVK----QPSPRKRKSKESDT 350
+ +SD EE RQK L Q K +PS KR++ + T
Sbjct: 360 LS----DQSDLEEQKPKRPLTARQKAAAEKKGINSNLASQTKTEDNKPSAAKRRAIGART 415
Query: 351 EDDDGGNDDDGGGSDDNAEEAPKTKSGKVTKNKQAKAVTTSKEKVISQKGKPSKKKA 407
GGS ++ + K + G K K V EK+ K + +KKA
Sbjct: 416 -----------GGSKNHPDSEVKKEKGSTECRKSKKQVEAVGEKLAKIKPQKGRKKA 461
>gi|255080114|ref|XP_002503637.1| predicted protein [Micromonas sp. RCC299]
gi|226518904|gb|ACO64895.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/274 (42%), Positives = 166/274 (60%), Gaps = 14/274 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN----KVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE+AR +E HCIG K+ K +D K+ V F +++L K + +AH
Sbjct: 1 MPELPEVESARCLVEAHCIGAKVTKVEFNEDGSFDEKIFKDVERKAFVSALLNKTLTAAH 60
Query: 57 RKGKNLWLRL----DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
R+GK++W + DSP F FGMTGA I+G +YK + V DT WP +++K V
Sbjct: 61 RRGKHMWWDMSGGADSP---LFHFGMTGAFSIRGKGAMKYK-AFVVDTSNWPPRFAKLVV 116
Query: 113 ELDDGLELSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
D+G+ L++TD RRF ++RL+ D T+ PPISELG D LL F +K+ I
Sbjct: 117 TFDNGIALAYTDPRRFGRIRLVRGDVTASPPISELGFDPLLAMPDEAAFASRFAKRGGPI 176
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K++LLDQ+ +G+GNW+ADEVLY +++HP Q A SL+ L +++VI+ A + GA
Sbjct: 177 KSVLLDQTIAAGVGNWIADEVLYHSRLHPEQPAKSLTPAQLRDLRDAMEDVIKTACDAGA 236
Query: 232 DSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAG 265
D+ FP +W+FH R K V G+ I FIT G
Sbjct: 237 DAEMFPDDWLFHHRWGKVAGE-VGGEPIQFITVG 269
>gi|367040051|ref|XP_003650406.1| hypothetical protein THITE_2109818 [Thielavia terrestris NRRL 8126]
gi|346997667|gb|AEO64070.1| hypothetical protein THITE_2109818 [Thielavia terrestris NRRL 8126]
Length = 393
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 191/355 (53%), Gaps = 33/355 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK I +D V G + + ++ GK +LSA +
Sbjct: 1 MPEIAEVARIVHYLRLHLVGKSIKSVKAIEDTNVFGKAGTTGPEVAEALTGKKVLSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK WL LD PP P FGMTG I+IKG YK+ ++ D WP KY KF ++ +
Sbjct: 61 GKYFWLVLDKPPHPVMHFGMTGWIHIKGDRTAYTNYYKKMKPEELDAWPPKYWKFHLKTE 120
Query: 116 D-GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDEFT-----DSLS 165
D +E++FTD RRF +VRL++ P P+ E GPD +++ D FT D +
Sbjct: 121 DPTVEIAFTDPRRFGRVRLVDCPGESIRKYSPLVENGPDPVVD---TDVFTEGYLRDKMR 177
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
+ + IKAL+LDQS ISGIGNWV DEVLYQAK+HP Q + E L + I+ V +
Sbjct: 178 SRHVPIKALILDQSVISGIGNWVGDEVLYQAKLHPEQYCDDFTDEQIKRLYEAIRYVCQF 237
Query: 226 ALEVGADSSQFPSNWIFHSREKKPGKAFV----DGKKIDFITAGGRTTAYVPELQKLNG- 280
A++ DS +FP +W+FH R K K V G+++ F+T GGRT+ YVP++QK +G
Sbjct: 238 AVDKLGDSDEFPKDWLFHYRWNKGAKGAVGHLPSGERLAFLTVGGRTSCYVPDVQKKSGR 297
Query: 281 ---------VQAAKAVGKPRKQA-PKGEDSKDDDKYNSGDESESDGEEIAENVKS 325
+++ + KP++ A KG +DD N D E A+ K+
Sbjct: 298 IVPGVKEKLIESDQGESKPKQPAKSKGAKGEDDQPQNKKRRKAEDDEAPAKKSKT 352
>gi|336466518|gb|EGO54683.1| hypothetical protein NEUTE1DRAFT_104118 [Neurospora tetrasperma
FGSC 2508]
gi|350286595|gb|EGZ67842.1| hypothetical protein NEUTE2DRAFT_169673 [Neurospora tetrasperma
FGSC 2509]
Length = 415
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 191/357 (53%), Gaps = 34/357 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK I + DD V G A ++GK I+SA +
Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVIKHAEAIDDGNVFGKVGTDGPKMAAGLIGKKIVSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L P FGMTG I+IKG YK+ + D+WP KY KF +E +
Sbjct: 61 GKYFWMELSKAPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDEHDKWPPKYWKFKIETE 120
Query: 116 DGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDAL--LEPMTVDEFTDSLSKKKI 169
DG E++FTD RRF +VR+++ P P+ E GPD + L+ T D + + +++
Sbjct: 121 DGDEMAFTDPRRFGRVRVVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLREKMKSRRV 180
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
IKALLLDQ+ ISGIGNWVADEVLY AK+HP Q S L + I+ V A++
Sbjct: 181 PIKALLLDQAVISGIGNWVADEVLYHAKLHPEQYCNDFSDAEMKQLYESIRYVCHTAVDK 240
Query: 230 GADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG----- 280
DS QFP +W+F+ R K K +G K+ F+T GGRT+ Y P QK G
Sbjct: 241 LGDSDQFPDDWLFNYRWGKGSKNAHSHTPNGDKLAFLTVGGRTSCYAPARQKKTGQIVSG 300
Query: 281 -----VQAAKAVGKPRKQAP--KGEDSKDDDKYNSGDESESDGEEI-AENVKSKKRQ 329
+++A+ P K+AP KG SK N +E E+DG E+ AE S+KR+
Sbjct: 301 VKEEPLESAEEKDSP-KEAPGTKGAKSK-----NKSEELEADGSEVKAERATSRKRK 351
>gi|378729637|gb|EHY56096.1| formamidopyrimidine-DNA glycosylase [Exophiala dermatitidis
NIH/UT8656]
Length = 447
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 174/316 (55%), Gaps = 36/316 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV I +H +GK + K + DDN V G SA++FE ++ GK ++ A ++
Sbjct: 1 MPEIAEVARTVHYIRKHLVGKTLAKVVATDDNNVYGKAGTSAAEFEKAMTGKKVIDAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK---------------RSAVKDTDE- 102
GK W+ + SPP P FGM+G ++ K Y+ K T++
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMSGWLHFKSEHTYYYQPKKADKTTKPNEAGEAGEAKSTEQT 120
Query: 103 -WPSKYSKFFVEL-------DDGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDA 150
WP K KF + D +E +F D RRFA++RL+N P S V P+ E GPD
Sbjct: 121 PWPPKVMKFLLTTKPDDDNSSDVVEAAFVDMRRFARIRLVNCPASEIRNVSPLKENGPDP 180
Query: 151 LLEP--MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
+++ +TVD KK+ IKA+LLDQ+ ISGIGNWV DE++Y AK+HP Q A +L+
Sbjct: 181 VIDKDIVTVDWLRQKCKSKKVPIKAMLLDQAVISGIGNWVGDEIMYHAKMHPEQYANTLT 240
Query: 209 KESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITA 264
+ L K I + A+E+ ADS +FP +W+F R +K A +G+KI F+T
Sbjct: 241 DDQIVQLHKSIHYICGTAVELLADSEKFPDDWLFRHRWGKGKKNSSNAMPNGEKIAFLTV 300
Query: 265 GGRTTAYVPELQKLNG 280
GGRT+A VP +QK G
Sbjct: 301 GGRTSAVVPSVQKKTG 316
>gi|321264442|ref|XP_003196938.1| hypothetical protein CGB_L0290C [Cryptococcus gattii WM276]
gi|317463416|gb|ADV25151.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 478
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 185/337 (54%), Gaps = 49/337 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++++I G ++F + G+ I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDRIIFTGGTDHNEFAKEISGRTITGCERK 59
Query: 59 GKNLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF + L
Sbjct: 60 GKMFWITLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESVDVWPPRFYKFVLRLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 KGSIGDEPRELAFIDGRRLGRLRLVSDPVSSYPPVSELGFDPVLSHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V A+
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIKDLHHQLRAVPLTAIS 239
Query: 229 VGADSSQFPSNWIFHSREKK--------------PGKAFVDGK----------------- 257
V ADS FPS+W+F R K GK F+DG+
Sbjct: 240 VNADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKTKGKKFIDGEGGEDVEPEDKEFLELPD 299
Query: 258 ----KIDFITAGGRTTAYVPELQKL-NGVQAAKAVGK 289
I FI GGRTTA V ELQK+ GV+ + K
Sbjct: 300 GSPATIKFIEVGGRTTALVEELQKMPEGVKVKSKIKK 336
>gi|353236828|emb|CCA68814.1| related to formamidopyrimidine-DNA glycosylase [Piriformospora
indica DSM 11827]
Length = 364
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 200/360 (55%), Gaps = 27/360 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A I G+KI K +D V G S ++F + G+ ++ R GK
Sbjct: 1 MPELPEVERAAGVIRAAAKGRKISKVETTEDTIVYTGTSHTEFAQEITGRTLVDTGRYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF---FVELDD 116
+L LD P GMTGAI ++G Y++ +D ++WP K+ KF F L++
Sbjct: 61 VFYLLLDGDGRVPVLHLGMTGAIQVRGGEALYYRKKPKQDPNDWPPKFMKFILHFEPLEE 120
Query: 117 G---LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
G E++F D RR A++RL D + PPIS LG D +L ++EF + + K+ IKA
Sbjct: 121 GGEITEIAFLDPRRLARIRLCKDHLNEPPISALGFDPILSMPPIEEFQEKVLKRGCPIKA 180
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLLDQS+ +G+GNW+ADEVL+ + +HP QTA SLS E L + I+ V + A+EV ADS
Sbjct: 181 LLLDQSFSAGVGNWIADEVLFHSAVHPEQTAKSLSPEKIKLLYRNIEYVCKTAVEVNADS 240
Query: 234 SQFPSNWIFHSREKKPGK-----AFVDGKK--IDFITAGGRTTAYVPELQKLNGVQAAKA 286
+FPSNW+F R K GK G+K I +IT GGRT+A V ++QKL G
Sbjct: 241 REFPSNWLFKHRWGK-GKDKSTLVLPSGEKASIKWITVGGRTSAVVQQVQKLEGAS---- 295
Query: 287 VGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSK 346
K+A K + +DD +S E G++ + K +K K G + P P++ + K
Sbjct: 296 -----KKAKK--EKIEDDTESSTSELTDLGDDTEDEEKKRKPAK-GKRKAPPEPKQSRKK 347
>gi|298708421|emb|CBJ48484.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 532
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 165/295 (55%), Gaps = 21/295 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIA-----------DDNKVIDGVSASDFEASVLG 49
MPELPEVE +R +EE C+G I DD + + ++A + ++ G
Sbjct: 1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDMTAKSLKDTLEG 60
Query: 50 KAILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSK 109
+ I+ R+GK +W LD PP P F FGMTGA +KG ++K K ++EWP +++K
Sbjct: 61 RKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGE--KRHKFVKFKVSEEWPPRFAK 118
Query: 110 FFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+++ +G L+ TD RR ++V+L +P + PPIS LGPD L P++++ F +L+K
Sbjct: 119 LEIQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTA 178
Query: 170 TIKALLLDQ-SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
IKA+LL Q +SG+GNWVADEV +QA +HP +L E A L + V +A E
Sbjct: 179 PIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQIAALHSRLLSVCREACE 238
Query: 229 VGADSSQFPSNWIFHSREKKPGK------AFVDGKKIDFITAGGRTTAYVPELQK 277
AD + FP W+FH R K GK G I F GGRTTA VP +QK
Sbjct: 239 ARADYTSFPKEWLFHHRWGK-GKNSEGAPRVSSGHPIVFDVVGGRTTAIVPAVQK 292
>gi|159489098|ref|XP_001702534.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280556|gb|EDP06313.1| predicted protein [Chlamydomonas reinhardtii]
Length = 297
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 177/296 (59%), Gaps = 34/296 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR +E C GK I+ + +ADD KVI+G + + ++ G+ +L AHRKG
Sbjct: 1 MPELPEVEAARGLVELGCKGKTILVARVADDEKVINGCTPDELRKALEGRTLLRAHRKG- 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK-DTDEWPSKYSKFFVELDDGLE 119
MTG I +KGV VT+YKR+ ++ D + WP +++K +EL G
Sbjct: 60 -----------------MTGGIVVKGVGVTKYKRAHLESDPESWPPRFTKLELELQGGGR 102
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLE-PMTVDEFTDSLSKK-----KITI 171
L++ D RRF +++LL DP + P+ LG D LL+ P T +F + ++ + I
Sbjct: 103 LAYVDSRRFGRIKLLPGPDPLACEPLCRLGWDVLLQLPPTAAQFGQVVRERVVRAPSLRI 162
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
KALLLDQ + SGIGNWVADEVLYQA+IHP QTA SL S A L I+EV+ A+ V A
Sbjct: 163 KALLLDQEFCSGIGNWVADEVLYQARIHPEQTATSLDDGSMAALHAAIREVVGLAVRVEA 222
Query: 232 DSSQFPSNWIFHSRE-------KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
DS +FP +W+FH R K G+ I F+T G RT+A+VP +Q+L G
Sbjct: 223 DSDRFPRDWLFHYRRVCLCLWTNKKASQDASGRAIHFVTVGSRTSAFVPAVQQLKG 278
>gi|424513788|emb|CCO66410.1| formamidopyrimidine-DNA glycosylase [Bathycoccus prasinos]
Length = 361
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 165/286 (57%), Gaps = 10/286 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD------DNKVIDGVSASDFEASVLGKAILS 54
MPELPEVE AR+ + HC+ K I D K + F+ +VL K +L+
Sbjct: 1 MPELPEVEHARKLVHAHCVNKICTNVIFPSAETGVLDEKCFKDIGEEMFKKAVLNKRLLN 60
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
HRKGK WL + F F FGMTGA +KG +Y V D + WP K+ KF +E
Sbjct: 61 THRKGKQGWLEFEGESFVLFHFGMTGAFSVKGERPLKYVEFKV-DQESWPPKFYKFVLEF 119
Query: 115 DDGLE-LSFTDKRRFAKVRLLND-PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
G + L++TD RRF +V++ N+ P P+++LG D LE ++ EF ++ IK
Sbjct: 120 SGGEKCLAYTDPRRFGRVQVRNECPRKSAPVNKLGFDPYLERISETEFEKIFRRRNAAIK 179
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
++LLDQS G+GNW+ADE+LY+AKIHP A L+ E+ +L + + +V A+E AD
Sbjct: 180 SVLLDQSVACGVGNWMADEMLYRAKIHPEVKASELNGEAMRSLREAMFDVTRVAVESDAD 239
Query: 233 SSQFPSNWIFHSREKKPGKA-FVDGKKIDFITAGGRTTAYVPELQK 277
S +FPS+W+FH R K A +G+KI F GGRTTA+V QK
Sbjct: 240 SGRFPSDWLFHHRWGKNQNAKMANGEKISFCEVGGRTTAFVAARQK 285
>gi|425768860|gb|EKV07371.1| Formamidopyrimidine-DNA glycosylase, putative [Penicillium
digitatum PHI26]
gi|425776365|gb|EKV14584.1| Formamidopyrimidine-DNA glycosylase, putative [Penicillium
digitatum Pd1]
Length = 370
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 169/294 (57%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL E+ I EH +GK + K D+ + G SA++F+ ++ GK I+ ++
Sbjct: 1 MPELAEIHRIVHFIREHLVGKTLSKVQAQHDDIIFGKVGTSATEFQKAMQGKKIVGVGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK WL + SPP FGM G + IK A T Y R+ EWP KY KF +E +DG
Sbjct: 61 GKYFWLTMSSPPHAVMHFGMAGWLKIKD-ADTYYYRTDKPVDQEWPPKYWKFLLETNDGP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P + P+ E GPD + + TVDE TD L KKK+
Sbjct: 120 KTEAAFVDARRLGRIRLVDCPAGEIRNHTPLKENGPDPVADKDTVDEAWLTDKLGKKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L + V ++ V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQIKALHSAVHYVCSTSIGVL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS +FP +W+F R K K A +G KI F+T GGRT+A VP +QK G
Sbjct: 240 ADSEKFPEHWLFKHRWGKGKKNQPAALPNGDKITFLTVGGRTSAVVPAVQKKTG 293
>gi|310799523|gb|EFQ34416.1| formamidopyrimidine-DNA glycosylase domain-containing protein
[Glomerella graminicola M1.001]
Length = 427
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 182/350 (52%), Gaps = 44/350 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GKKI K DD V G S FE ++ G+ ++S +
Sbjct: 1 MPEIAEVARCVHFLRHHLLGKKIAKVSAPDDANVFGKVGTSGPAFEKALKGRKVVSVGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W+ D PP GMTG I+IKG YK+ + D WP KY KF +E D
Sbjct: 61 GKYFWITFDKPPHAVMHLGMTGWIHIKGDKTAYTNYYKKMKAGEADVWPPKYWKFQLETD 120
Query: 116 DG--LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDS-----L 164
D + +FTD RRF ++RL++ P + P+ E GPD +++ VD FT++ +
Sbjct: 121 DNPPVAAAFTDPRRFGRIRLVDCPGADIRKHSPLKENGPDPVVD---VDVFTEAYLAGKM 177
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
+ + +KALLLDQS+ISGIGNWVADEVLYQA++HP Q S A L + ++ V +
Sbjct: 178 RTRHVPVKALLLDQSHISGIGNWVADEVLYQARLHPEQYCDSFDVAEVARLYEAVRYVCQ 237
Query: 225 KALEVGADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
A++ DS +FP++W+F+ R K K A +G KI F+T GGRT+ Y P QK G
Sbjct: 238 TAVDKLGDSDEFPADWLFNYRWGKGSKGAASALPNGDKIAFVTVGGRTSCYAPARQKKTG 297
Query: 281 ---------------------VQAAKAVGKPRKQAPKGEDSKDDDKYNSG 309
+ K VGK + QA + ED K K G
Sbjct: 298 QIVPSAKEEPLSGDEEAQPKVILKKKGVGKRQAQARESEDEKPTKKARGG 347
>gi|449550458|gb|EMD41422.1| hypothetical protein CERSUDRAFT_89989 [Ceriporiopsis subvermispora
B]
Length = 364
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 173/301 (57%), Gaps = 13/301 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A R + + + K+IV+ +D+ V +G+S +F + + + R GK
Sbjct: 1 MPELPEVERAARLVRDVALHKRIVRVETTEDDIVYNGISHVEFAKELQDRVVTGVGRYGK 60
Query: 61 NLWLRLD-SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--- 116
++ LD S P FGMTG + ++G Y+ + K + +WP ++ KF + + +
Sbjct: 61 VFYIELDGSGRMPVLHFGMTGMLQVRGEKAIYYRETPRKASTDWPPRFMKFILHVRNDES 120
Query: 117 --GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
EL+F D RR ++RL + P + PPIS LG D ++ ++ FT S+ K+ IKAL
Sbjct: 121 GATTELAFLDARRLGRIRLCSSPLTEPPISTLGFDPIISMPDLEVFTKSVRKRTCPIKAL 180
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS+ +G+GNWVADE+LY A+IHP +L+ + A L + EV A+EV AD S
Sbjct: 181 LLDQSFSAGVGNWVADEILYHARIHPEARCHTLTDDQIAPLYRQTLEVCRIAVEVNADDS 240
Query: 235 QFPSNWIFHSRE-----KKPGKAFVDGK--KIDFITAGGRTTAYVPELQKLNGVQAAKAV 287
+FP +W+F R KK DG I +IT GGRT+AYV ELQKL + ++ +
Sbjct: 241 KFPEDWLFKYRWGKGKGKKYTMRLADGSPATIKWITVGGRTSAYVAELQKLTQIVESEVL 300
Query: 288 G 288
G
Sbjct: 301 G 301
>gi|226290161|gb|EEH45645.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 385
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 205/386 (53%), Gaps = 41/386 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I ++ +GK I K + DD V G +A++F+ + GK+I+ ++
Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV-----KDTDEWPSKYSKFFVE 113
GK W+ + SPP P FGMTG + +K V Y+ A ++ + WPS + KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120
Query: 114 LDD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLS 165
LDD E +F D RR +VRL++ P + P+ E GPD +++ +T+D +
Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
K++ IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L + L I V
Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGDEILYHAKIHPEQYSNTLQESQIEQLYSAINYVCST 240
Query: 226 ALEVGADSSQFPSNWIFHSREKKPGKA-----FVDGKKIDFITAGGRTTAYVPELQKLNG 280
++ + +S +FPSNW+F R K GKA +G+KI FIT GGRT+A VP +QK G
Sbjct: 241 SVGLLGNSEEFPSNWLFSHRWSK-GKANHSHQLPNGEKIVFITVGGRTSAIVPAIQKKTG 299
Query: 281 VQAAKA-------VGKPRKQAPKGEDSKDDDKYNSGDESES-----------DGEEIAEN 322
A +P K+ +G SK D KY ES S D +I E+
Sbjct: 300 PVAGDVEDGATDDNNEPPKKK-RGAASKKDSKYVENVESHSPAKKPTMKKPKDEPKIKES 358
Query: 323 VKSKKRQKLGGQVKQPSPRKRKSKES 348
KSKK+ + +P+ R+S S
Sbjct: 359 -KSKKQTDTAQTEENKTPKNRRSTRS 383
>gi|134117606|ref|XP_772574.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255189|gb|EAL17927.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 475
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 185/342 (54%), Gaps = 49/342 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++ +I G ++F + G++I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERK 59
Query: 59 GKNLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF ++L
Sbjct: 60 GKTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 EGSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V A+
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAIS 239
Query: 229 VGADSSQFPSNWIFHSR---------------------------------EKKPGKAFVD 255
V ADS FPS+W+F R E K D
Sbjct: 240 VNADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVDGEGGEDVEPEDKEFLELPD 299
Query: 256 GK--KIDFITAGGRTTAYVPELQKL-NGVQAAKAVGKPRKQA 294
G I FI GGRTTA V ELQK+ GV+ + K K+A
Sbjct: 300 GSPATIKFIEVGGRTTALVEELQKMPEGVEIKPKISKGGKRA 341
>gi|58270184|ref|XP_572248.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228506|gb|AAW44941.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 447
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 189/355 (53%), Gaps = 56/355 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++ +I G ++F + G++I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERK 59
Query: 59 GKNLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF ++L
Sbjct: 60 GKTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 EGSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V A+
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAIS 239
Query: 229 VGADSSQFPSNWIFHSR---------------------------------EKKPGKAFVD 255
V ADS FPS+W+F R E K D
Sbjct: 240 VNADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVDGEGGEDVEPEDKEFLELPD 299
Query: 256 GK--KIDFITAGGRTTAYVPELQKL-NGVQ-------AAKAVGKPRKQAPKGEDS 300
G I FI GGRTTA V ELQK+ GV+ K G RK+ K E+S
Sbjct: 300 GSPATIKFIEVGGRTTALVEELQKMPEGVEIKPKISKGGKRAGAKRKKVAKEEES 354
>gi|345570452|gb|EGX53273.1| hypothetical protein AOL_s00006g139 [Arthrobotrys oligospora ATCC
24927]
Length = 417
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 175/298 (58%), Gaps = 14/298 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPE+ E+ I + GK ++K+++A+++ ++ ++S F ++LGK ++ A ++G
Sbjct: 1 MPEISEITRVVHYINRYLAGK-VIKNVVANEDAIVFKDTTSSAFVKAMLGKKVVEAKQQG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK-----RSAVKDTDEWPSKYSKFFVEL 114
K W+ +DSPP P FGMTG I Y+ K+ EWP ++ KF E+
Sbjct: 60 KYFWIEMDSPPHPVMHFGMTGWITFSKAPEAHYRADMAEEDDDKEEIEWPPRFMKFVFEM 119
Query: 115 DD-GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+D G +FTD RR +VRL++ P V P+ E GPD +++ + D F L+++K
Sbjct: 120 EDEGNNAAFTDARRLGRVRLIDVPAEQIRKVSPLKENGPDPVVDGLDEDWFKGVLNQRKK 179
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
+KALLLDQ +ISG+GNWV DE+LY A+IHP Q + +LSK L + V + A E+
Sbjct: 180 PVKALLLDQGFISGVGNWVGDEILYHARIHPEQYSNTLSKAQQKQLYESTMYVCKTACEL 239
Query: 230 GADSSQFPSNWIFHSR--EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAK 285
DSS+FP +W+F R + K G A +G+KIDF+ GGRT+AYV QK G A K
Sbjct: 240 LGDSSKFPEDWLFKYRWGKGKKGNALPNGEKIDFVKVGGRTSAYVKTRQKATGGTAVK 297
>gi|164428247|ref|XP_958637.2| hypothetical protein NCU05984 [Neurospora crassa OR74A]
gi|157072070|gb|EAA29401.2| hypothetical protein NCU05984 [Neurospora crassa OR74A]
Length = 415
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 213/415 (51%), Gaps = 41/415 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK I + DD V G A ++GK ++SA +
Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVIKHAEAIDDGNVFGKVGTDGPKMAAGLIGKKMVSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L P FGMTG I+IKG YK+ + D+WP KY KF +E +
Sbjct: 61 GKYFWMELSKAPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIETE 120
Query: 116 DGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDAL--LEPMTVDEFTDSLSKKKI 169
DG E++FTD RRF +VR+++ P P+ E GPD + L+ T D + + +++
Sbjct: 121 DGDEMAFTDPRRFGRVRVVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLREKMKSRRV 180
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
IKALLLDQ+ ISGIGNWVADEVLY AK+HP Q S L + I+ V + A++
Sbjct: 181 PIKALLLDQAVISGIGNWVADEVLYHAKLHPEQYCNDFSDAEMKQLYESIRYVCQTAVDK 240
Query: 230 GADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAK 285
DS QFP +W+F+ R K K +G K+ F+T GGRT+ Y P QK G +
Sbjct: 241 LGDSDQFPDDWLFNYRWGKGSKNAHSHTPNGDKLAFLTVGGRTSCYAPARQKKTGQIVSG 300
Query: 286 AVGKP---------RKQAP--KGEDSKDDDKYNSGDESESDGEEI-AENVKSKKRQ---K 330
+P K+AP KG SK N +E E+DG ++ AE S+KR+ +
Sbjct: 301 VKEEPLESAEEKDSSKKAPGTKGAKSK-----NKSEELEADGSKVKAEMAVSRKRKIKIE 355
Query: 331 LGGQVK------QPSPRKRKSKESDTEDDDGGNDDDGGGSDDNAEEAPKTKSGKV 379
G+V + P K+ ++ ED N D G + + + + +SG++
Sbjct: 356 EDGEVNFTPHNAKAHPSKKPTRSQYFEDAKKPNGDAGQTEEAKTDISGRRRSGRL 410
>gi|303272279|ref|XP_003055501.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463475|gb|EEH60753.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 330
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 175/300 (58%), Gaps = 18/300 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN----KVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE+AR E+H +G IV +D K+ + S F +++ G+ + +A
Sbjct: 1 MPELPEVESARVLCEKHIVGATIVSVEFNEDGTYDEKIFKEIDESQFTSALKGRTVKAAR 60
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGV-AVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R GK+LW L + P F FGMTGA+ IKG ++ +YK AV DT WP +++K V
Sbjct: 61 RLGKHLWWDLGTRSTPLFHFGMTGAMTIKGGGSIVKYKAFAV-DTVNWPPRFAKLVVTFS 119
Query: 116 DGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+G+ L++TD RRF +VRL++ T PP+S+LG D LL F +K+ +KA+
Sbjct: 120 NGVTLAYTDPRRFGRVRLVDGVVTESPPLSDLGFDPLLAMPDEKTFASLFAKRAAPVKAV 179
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQ +G+GNWVADEVL+ A++HP Q A SL+ A + + V+ A E GA S
Sbjct: 180 LLDQKVAAGVGNWVADEVLFHARVHPEQPAKSLTHGQLAMVRDAMSMVVTVACEAGAISE 239
Query: 235 QFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQA-AKAVGKPRKQ 293
+FP +W+FH R K V G K+ GGRTTA+VP +QK V A A V K +K
Sbjct: 240 KFPEDWLFHHRWGK-----VTGNKV-----GGRTTAFVPSVQKKTSVNAKAPPVAKEKKM 289
>gi|189189872|ref|XP_001931275.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972881|gb|EDU40380.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 424
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 173/291 (59%), Gaps = 16/291 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG---VSASDFEASVLGKAILSAHR 57
MPE+ EV +++H +GK I K + A D+ ++ G SAS F+ ++ GK ++ A +
Sbjct: 1 MPEIAEVARVVHFLKKHIVGKTI-KGVNALDDDIVYGKVGTSASAFKKAITGKKVVDARQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK WL LD+PP P F FGM G + IK T Y RSA + EWP K+ KF +++++
Sbjct: 60 QGKYFWLVLDTPPHPLFHFGMAGWLEIKNEE-TGYYRSAKPEKTEWPPKFWKFVLQMEEE 118
Query: 118 LE--LSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKI 169
E ++F D RR A++RL++ D P+ E GPD +L+ +TV+ L KK+
Sbjct: 119 PENEVAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDKSILTVEWLGKKLRSKKV 178
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
+KALLLDQ+ ISGIGNWV DEV+YQAK+HP Q + + S E TL + I V + A+
Sbjct: 179 PVKALLLDQANISGIGNWVGDEVMYQAKLHPEQYSNTFSDEQIKTLHEAIMYVCDTAVAA 238
Query: 230 GADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
DS FP +W+ R KK +G+KI F+ GGRT+A VP +QK
Sbjct: 239 NGDSDLFPEHWLMKHRWGKGKKEASKLPNGEKITFLKVGGRTSAIVPSVQK 289
>gi|134117608|ref|XP_772575.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255190|gb|EAL17928.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 447
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 187/342 (54%), Gaps = 49/342 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KI S+ A ++ +I G ++F + G++I RK
Sbjct: 1 MPELPEVERARKLIEDSCKGYKIA-SVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERK 59
Query: 59 GKNLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--- 114
GK W+ L +P FGMTG I +KG T Y+R + D WP ++ KF ++L
Sbjct: 60 GKTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQ 119
Query: 115 -----DDGLELSFTDKRRFAKVRLLNDP-TSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
D+ EL+F D RR ++RL++DP +S PP+SELG D +L T++EFT L KK
Sbjct: 120 EGSIADEPRELAFIDGRRLGRLRLVSDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
T+K +++DQ++ +G+GNWVADEVLYQA+IHP +LS+++ L ++ V A+
Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQNIRDLHHQLRAVPLTAIS 239
Query: 229 VGADSSQFPSNWIFHSREKK------------------------------PGKAFV---D 255
V ADS FPS+W+F R K K F+ D
Sbjct: 240 VNADSKLFPSDWLFRWRWSKGTTQKKQMEKDKKSKGKKVVDGEGGEDVEPEDKEFLELPD 299
Query: 256 GK--KIDFITAGGRTTAYVPELQKL-NGVQAAKAVGKPRKQA 294
G I FI GGRTTA V ELQK+ GV+ + K K+A
Sbjct: 300 GSPATIKFIEVGGRTTALVEELQKMPEGVEIKPKISKGGKRA 341
>gi|119194501|ref|XP_001247854.1| hypothetical protein CIMG_01625 [Coccidioides immitis RS]
gi|392862910|gb|EAS36408.2| formamidopyrimidine-DNA glycosylase [Coccidioides immitis RS]
Length = 416
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 198/372 (53%), Gaps = 24/372 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK + ++ D+ + G SA +F+ ++ G I+ A ++
Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + PP P FGMTG + IKGV Y+ +D WP K+ KF + +DD
Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEDDGPWPPKFWKFQLVMDDDK 120
Query: 118 -LELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +VRL++ P S P+ E GPD +++ V E +SKKK+
Sbjct: 121 KTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVIDKGIVTESWLKSIVSKKKVP 180
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQS ISG+GNW+ADEVLY ++IHP QT+ +L L I V ++++
Sbjct: 181 IKALLLDQSIISGLGNWMADEVLYHSQIHPEQTSNTLDDSQIRELNSAIHYVCATSVDLL 240
Query: 231 ADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
DS++FP++W+ H R +K+P K ++G + FIT GGRT+A VP +QK
Sbjct: 241 GDSARFPADWLMHHRWNKGKKEPSK-MLNGDPVTFITVGGRTSAIVPAVQKKT------- 292
Query: 287 VGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSK 346
P KG ++K+D S +S S G A ++ + G + K S
Sbjct: 293 --HPTATNDKGGNAKEDVDDGSATKSRSKGRGKATVKETDETTTTNGNKRSTRISKASSV 350
Query: 347 ESDTEDDDGGND 358
+++ E + GND
Sbjct: 351 KAEEEKNTEGND 362
>gi|255947552|ref|XP_002564543.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591560|emb|CAP97795.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 370
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/354 (39%), Positives = 187/354 (52%), Gaps = 25/354 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL E+ I EH +GK + K D+ + G S ++F+ ++ GK I+ A ++
Sbjct: 1 MPELAEIHRIVHFIREHLVGKTLSKVQAQHDDIIFGKVGTSGAEFQKAMQGKKIVGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK W+ + SPP FGM G + IK A T Y RS EWP KY KF +E +D
Sbjct: 61 GKYFWMTMSSPPHAVMHFGMAGWLKIKD-ADTYYYRSDKPADQEWPPKYWKFLLETNDES 119
Query: 117 GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P P+ E GPD + + TVDE T+ L KKK+
Sbjct: 120 KTEAAFVDARRLGRIRLVDCPADEIRDHTPLKENGPDPVTDKDTVDEAWLTEKLGKKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L I V ++ V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNADQIKDLHSAIHYVCSTSIGVL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
ADS +FP +W+F R K K +G KI F+T GGRT+A VP +QK G A
Sbjct: 240 ADSEKFPEHWLFKHRWGKGKKNQPAVLPNGDKITFLTVGGRTSAVVPAVQKKTGPVAKDI 299
Query: 287 VGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSP 340
G K P K + ESD EE E ++ KR G KQ +P
Sbjct: 300 DGDVTKSTPANSKRK-----RVALKEESDSEE-GEATQTPKR----GAPKQKNP 343
>gi|261194587|ref|XP_002623698.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis
SLH14081]
gi|239588236|gb|EEQ70879.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis
SLH14081]
gi|239613483|gb|EEQ90470.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ER-3]
gi|327355061|gb|EGE83918.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ATCC
18188]
Length = 378
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 173/296 (58%), Gaps = 17/296 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I ++ +G I K + DD V G +A++F+ + GK I+ + ++
Sbjct: 1 MPELAEVARIVHYIRKYLVGNTITKVHVQDDPIVFGKAGTTAAEFKKHMEGKKIVGSGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE--WPSKYSKFFVELDD 116
GK W+ + SPP P FGMTG + + T Y+R+ + +E WP K+ KF +++DD
Sbjct: 61 GKYFWITMSSPPHPVMHFGMTGWLKFT-IMNTHYRRTTAANNEESQWPPKFWKFILQIDD 119
Query: 117 GL--ELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKK 168
E +F D RR +VRL+N P + P+ E GPD +L+ MT+D + L+ KK
Sbjct: 120 ASKSETAFVDPRRLGRVRLVNCPGADIRKHSPLKENGPDPILDKHIMTLDWLSRKLASKK 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+ IKALLLDQS ISGIGNW+ DE+LY AKIHP Q + ++ + L I V +++
Sbjct: 180 VPIKALLLDQSNISGIGNWMGDEILYHAKIHPEQYSNTIEQGQIEQLHSAISYVCSTSVD 239
Query: 229 VGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
+ DS +FP++W+F R ++K + +G KI FIT GGRT+A VP +QK G
Sbjct: 240 LLGDSEKFPADWLFKHRWTKGKQKHSQRLPNGDKIVFITVGGRTSAVVPSVQKRTG 295
>gi|408394974|gb|EKJ74165.1| hypothetical protein FPSE_05667 [Fusarium pseudograminearum CS3096]
Length = 392
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 182/332 (54%), Gaps = 36/332 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK+I+ + DD V G S + EA++ GK I+SA +
Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIISASAIDDKNVFGKVGTSGEEVEAALKGKKIMSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIK---GVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L+ PP FGMTG ++IK YK+ + ++WP ++ KF + +
Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGWMHIKDEQTAYTNYYKKMKEGEHEQWPPRFWKFQFKTE 120
Query: 116 DG--LELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDEFTDS-----L 164
+E +FTD RRF +VRL++ P P+ E GPD +++ VD FT+ +
Sbjct: 121 GSPEVEAAFTDSRRFGRVRLIDCPGDEIRQHSPLVENGPDPVVD---VDRFTEEYLHSKM 177
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
+++ IKALLLDQ+ ISGIGNWVADE LYQAK+HP Q S TL K I+ V +
Sbjct: 178 RARRVPIKALLLDQTMISGIGNWVADETLYQAKLHPEQYCDQFSDAQITTLYKMIRYVCQ 237
Query: 225 KALEVGADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
A++ DS +FP +W+F+ R K K +G+KI FIT GGRT+ Y P +QK G
Sbjct: 238 TAVDKLGDSDEFPEHWLFNYRWGKGSKDAATKLPNGEKIAFITVGGRTSCYAPGVQKKTG 297
Query: 281 VQAA---------KAVGKP----RKQAPKGED 299
AA KA KP RK++P E+
Sbjct: 298 NTAAGIKEESLESKAEAKPSKNSRKKSPDAEE 329
>gi|46128147|ref|XP_388627.1| hypothetical protein FG08451.1 [Gibberella zeae PH-1]
Length = 392
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 170/303 (56%), Gaps = 23/303 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK+I+ + DD V G S + EA++ GK I+SA +
Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIISASATDDKNVFGKVGTSGEEVEAALKGKKIMSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIK---GVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L+ PP FGMTG I+IK YK+ + ++WP ++ KF + +
Sbjct: 61 GKYFWIALEKPPHLVMHFGMTGWIHIKDEQTAYTNYYKKMKEGEHEQWPPRFWKFQFKTE 120
Query: 116 DG--LELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDEFTDS-----L 164
+E++FTD RRF +VRL+N P P+ E GPD +++ VD FT+ +
Sbjct: 121 GSPEVEVAFTDSRRFGRVRLINCPGDEIRQHSPLVENGPDPVVD---VDRFTEEYLHSKM 177
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
+ + IKALLLDQ+ ISGIGNWVADE LYQAK+HP Q S TL K I+ V +
Sbjct: 178 RARHVPIKALLLDQTMISGIGNWVADETLYQAKLHPEQYCDQFSDAQITTLYKMIRYVCQ 237
Query: 225 KALEVGADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
A++ DS +FP +W+F+ R K K +G+KI FIT GGRT+ Y P +QK G
Sbjct: 238 TAVDKLGDSDEFPEHWLFNYRWGKGSKDAATKLPNGEKIAFITVGGRTSCYAPGVQKKTG 297
Query: 281 VQA 283
A
Sbjct: 298 NTA 300
>gi|242768773|ref|XP_002341637.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724833|gb|EED24250.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces
stipitatus ATCC 10500]
Length = 359
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 167/294 (56%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +G+ + + +D+ V G +A++F+ ++ G I A ++
Sbjct: 1 MPELAEVARIVHFIRKHLVGRTLANVQVQNDDIVYGKAGTTAAEFQKAMQGNKITGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + PP FGMTG + I+ A T Y R+ D EWP KY KF +E D+
Sbjct: 61 GKYFWITMAKPPHVVMHFGMTGWLKIRN-ADTYYYRTTNADDKEWPPKYWKFLLETDETP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E +F D RR A++RL++ P P+ E GPD L + +T+D D + KK+
Sbjct: 120 KTEAAFVDPRRLARIRLVDCPADDIRKYTPLRENGPDPLTDKDILTLDWLRDKIKGKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQ+ ISGIGNW+ DE+LY +KIHP Q + +L+ E L I V ++ V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTNEQIQQLHNSIDYVCTTSVRVL 239
Query: 231 ADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS QFP +W+F R +K A +G KI F+T GGRT+A VP +Q+ G
Sbjct: 240 ADSEQFPEDWLFKHRWGKGKKNQSSALPNGNKIVFLTVGGRTSAVVPAVQRKTG 293
>gi|302920238|ref|XP_003053028.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733968|gb|EEU47315.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 376
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 184/345 (53%), Gaps = 21/345 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK+IV + D V G S + EA++ GK I+SA +
Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIVSASAIGDKNVFGKVGTSGEEVEAALEGKEIVSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIK---GVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L+ PP FGMTG ++IK YK+ + ++WP K+ KF + +
Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGWMHIKDEKTAYTNYYKKMKDSELEQWPPKFWKFQFKTE 120
Query: 116 D--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDAL--LEPMTVDEFTDSLSKK 167
G+E++FTD RRF +VRL++ P P+ E GPD + L+ T D + +
Sbjct: 121 GSPGVEVAFTDARRFGRVRLVDCPGDQIRKYSPLVENGPDPVVDLDRFTEDYLRGKMRAR 180
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+ IKALLLDQ+ ISGIGNWVADE LYQAK+HP Q TL K I+ V + A+
Sbjct: 181 HVPIKALLLDQAMISGIGNWVADETLYQAKLHPEQYCDEFDDSQVTTLYKMIRYVCQTAV 240
Query: 228 EVGADSSQFPSNWIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNGVQA 283
+ DS +FP +W+F+ R K K +G+K+ FIT GGRT+ Y P +QK G
Sbjct: 241 DKLGDSDEFPEHWLFNYRWGKGSKGTATKLPNGEKLAFITVGGRTSCYAPGVQKKTGRTP 300
Query: 284 AKAVGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKR 328
A +P +P E+ K K ++SD E A K KKR
Sbjct: 301 AGIKEEPVDASPYFEEPKKPRK----KPADSDEEVRAPPAKKKKR 341
>gi|429857831|gb|ELA32673.1| formamidopyrimidine-dna glycosylase [Colletotrichum gloeosporioides
Nara gc5]
Length = 390
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 169/305 (55%), Gaps = 20/305 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GKKI + D V G S FE +V GK ++S +
Sbjct: 1 MPEIAEVARCVHFLRRHLLGKKIARVSAPGDANVFGKVGTSGLAFEEAVKGKKVVSVGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQYKRSAVK-DTDEWPSKYSKFFVEL- 114
GK W+ D PP GMTG I+IKG A T Y + K + D WP KY KF++E
Sbjct: 61 GKYFWITFDRPPHAVMHLGMTGWIHIKGDKTAYTNYYKKMKKSEMDTWPPKYWKFWIETE 120
Query: 115 -DDGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSKK 167
D + +FTD RRF ++RL++ P + P+ E GPD +++ T D F + +
Sbjct: 121 GDPTVRAAFTDPRRFGRIRLVDCPGAEIRNHSPLKENGPDPVVDVDVFTEDYFKQMMQSR 180
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+ +KALLL+Q+ ISGIGNWVADEVLYQAK+HP Q +K TL + I+ V + A+
Sbjct: 181 HVPVKALLLNQANISGIGNWVADEVLYQAKLHPEQYCDDFTKAEIRTLYEKIRYVCQTAV 240
Query: 228 EVGADSSQFPSNWIFHSREKKPGK------AFVDGKKIDFITAGGRTTAYVPELQKLNGV 281
+ DS +FP +W+F+ R K GK +G+K+ FIT GGRT+ Y PE QK G
Sbjct: 241 DKLGDSDEFPDDWLFNHRWGK-GKGDGVSSVLPNGEKLAFITVGGRTSCYAPERQKKTGQ 299
Query: 282 QAAKA 286
A A
Sbjct: 300 VAVTA 304
>gi|393218790|gb|EJD04278.1| AtMMH-1 [Fomitiporia mediterranea MF3/22]
Length = 351
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 165/294 (56%), Gaps = 14/294 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A I+ H GK I+K +D V G + +F +V G+ + R GK
Sbjct: 1 MPELPEVHRAANFIKTHAQGKTIIKVDANEDTIVFSGTTHEEFANAVRGRTVKDVGRYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--- 116
+L LD P P FGMTG I IKG + YK K WP +++K + L++
Sbjct: 61 VFYLDLDGDGPMPVMHFGMTGNILIKGESPLTYKEGPKKSDTLWPPRFTKCILHLENPPP 120
Query: 117 --GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+++F D RR ++RL +P PPIS LG D +L ++D+F+ S+ K+ +KAL
Sbjct: 121 APATQIAFIDPRRLGRIRLCKEPLLEPPISLLGFDPILRMPSLDDFSKSVLKRSCPVKAL 180
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS+ +G+GNWVADE+LY +++HP Q +LS + + L K V + A+ V AD+
Sbjct: 181 LLDQSFSAGVGNWVADEILYHSRVHPEQRCNTLSSDQVSVLYKNTSYVCQTAISVNADAD 240
Query: 235 QFPSNWIFHSREKKPGKAFVDGKK--------IDFITAGGRTTAYVPELQKLNG 280
+FP NW+F+ R K K ++ K I ++ GGRT+A+V ELQ N
Sbjct: 241 KFPDNWLFNHRWGKGKKKHLNPLKLPSGELATIKWLKVGGRTSAFVTELQTANA 294
>gi|119500164|ref|XP_001266839.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri
NRRL 181]
gi|119415004|gb|EAW24942.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri
NRRL 181]
Length = 367
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 192/363 (52%), Gaps = 35/363 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +GK + K +D+ V G SAS+F+ ++ GK ++SA ++
Sbjct: 1 MPELAEVSRIVHFIDQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK WL ++ PP FGM G + I+ A T Y R + EWP KY KF +E D
Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRD-ADTYYYRVEKPEDKEWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +++RL++ P P+ + GPD + + V E D L +K+
Sbjct: 120 KTEAAFVDFRRLSRIRLVDCPAEEIRKHSPLKDNGPDPVADKDIVTEEWLADKLKSRKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ E L I V +++V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQIKQLHSSIHYVCTTSVDVL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
ADS +FP +W+F R K K +G+KI F+T GGRT+A VP +Q+ G AK
Sbjct: 240 ADSEKFPEHWLFKHRWGKGKKNKPSVLPNGEKIVFLTVGGRTSAVVPSVQRKTG-PVAKD 298
Query: 287 VGKPRKQAPKG-------------EDSKDDD------KYNSGDESESDGEEIAENVKSKK 327
+G +PK ED DD+ KY S D EI E K +
Sbjct: 299 IGDEDANSPKTETKRKRVTAVKKEEDVNDDEKEPKSKKYGSRSRKSEDAVEIKEEPKQEG 358
Query: 328 RQK 330
R++
Sbjct: 359 RRR 361
>gi|358386142|gb|EHK23738.1| hypothetical protein TRIVIDRAFT_147401, partial [Trichoderma virens
Gv29-8]
Length = 380
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 196/361 (54%), Gaps = 26/361 (7%)
Query: 14 IEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLWLRLDSPPF 71
+ + +GK I + DD+ V G S + E ++ GK ++SA +GK W+ LD PP
Sbjct: 10 LRQRLVGKTIANAAAIDDSSVFGKVGTSGKEVEEALKGKTVVSAGSQGKYFWITLDKPPH 69
Query: 72 PSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELDDG--LELSFTDKR 126
FGMTG ++I G YK+ D +WP K+ KF + DD +E++FTD R
Sbjct: 70 LVMHFGMTGWVHINGEKTAYTNYYKKMKESDIAQWPPKFWKFHISTDDKEPVEVAFTDAR 129
Query: 127 RFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQSY 180
RF +VRL++ P P+ E GPD +++ T + + + + IKALLLDQ+
Sbjct: 130 RFGRVRLVHCPGESIRKHSPLVENGPDPVVDKDIFTEEYLRGKMKSRHVPIKALLLDQAM 189
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNWVADE LYQAK+HP Q + + + A L + I+ V + A++ DS +FP +W
Sbjct: 190 ISGIGNWVADETLYQAKLHPEQYSDTFDDKEIARLHESIRYVCQLAVDKLGDSDEFPDHW 249
Query: 241 IFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRK---- 292
+F+ R K GK +G+K+ FIT GGRT+ Y P +QK G A A +P K
Sbjct: 250 LFNHRWGKGGKDQATKLPNGEKLAFITVGGRTSCYAPGVQKKTGAVVAGAKAEPVKSESG 309
Query: 293 --QAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVK--QPSPRKRKSKES 348
+ KG+ +K + K DE + ++ AE K+R K + +PSP K+++ E
Sbjct: 310 KSKPAKGKAAKSEPKAEEDDEVPEEADD-AEPPAKKRRGKAASATEKSKPSPVKKEAVEE 368
Query: 349 D 349
D
Sbjct: 369 D 369
>gi|303311231|ref|XP_003065627.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|240105289|gb|EER23482.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|320039451|gb|EFW21385.1| formamidopyrimidine-DNA glycosylase [Coccidioides posadasii str.
Silveira]
Length = 416
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 196/372 (52%), Gaps = 24/372 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK + ++ D+ + G SA +F+ ++ G I+ A ++
Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + PP P FGMTG + IKGV Y+ + WP K+ KF + +DD
Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEGDGPWPPKFWKFRLVMDDDK 120
Query: 118 -LELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +VRL++ P S P+ E GPD + + V E +SKKK+
Sbjct: 121 KTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVTDKGIVTESWLKSIVSKKKVP 180
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQS +SG+GNW+ADEVLY ++IHP QT+ +L L I V ++++
Sbjct: 181 IKALLLDQSIMSGLGNWMADEVLYHSQIHPEQTSNTLDDSQIRELNSAIHYVCATSVDLL 240
Query: 231 ADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
DS++FP++W+ H R +K+P K ++G + FIT GGRT+A VP +QK
Sbjct: 241 GDSARFPADWLMHHRWNKGKKEPSK-MLNGDPVTFITVGGRTSAIVPAVQKKT------- 292
Query: 287 VGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSK 346
P KG ++K+D S +S S G A ++ + G + K S
Sbjct: 293 --HPTATNDKGGNAKEDVDDESATKSRSKGRGKATVKETDETTTTNGNKRSTRISKASSV 350
Query: 347 ESDTEDDDGGND 358
+++ E + GND
Sbjct: 351 KAEEEKNTEGND 362
>gi|225682725|gb|EEH21009.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides
brasiliensis Pb03]
Length = 392
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 188/349 (53%), Gaps = 38/349 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I ++ +GK I K + DD V G +A++F+ + GK+I+ ++
Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV-----KDTDEWPSKYSKFFVE 113
GK W+ + SPP P FGMTG + +K V Y+ A ++ + WPS + KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120
Query: 114 LDD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLS 165
LDD E +F D RR +VRL++ P + P+ E GPD +++ +T+D +
Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180
Query: 166 KKKITIKALLLDQSYISGIGNW-------VADEVLYQAKIHPLQTAVSLSKESCATLLKC 218
K++ IKALLLDQ+ ISGIGNW + DE+LY AKIHP Q + +L + L
Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGLASAIIRDEILYHAKIHPEQYSNTLQESQIEQLYSA 240
Query: 219 IKEVIEKALEVGADSSQFPSNWIFHSREKKPGKA-----FVDGKKIDFITAGGRTTAYVP 273
I V ++ + +S +FPSNW+F R K GKA +G+KI FIT GGRT+A VP
Sbjct: 241 INYVCSTSVGLLGNSEEFPSNWLFSHRWSK-GKANHSHQLPNGEKIVFITVGGRTSAIVP 299
Query: 274 ELQKLNGVQAAKAVGK--------PRKQAPKGEDSKDDDKYNSGDESES 314
+QK G A + P+K+ +G SK D KY ES S
Sbjct: 300 AIQKKTGPVAGDVEDEATDDNNEPPKKK--RGAASKKDSKYVENVESHS 346
>gi|402073074|gb|EJT68710.1| formamidopyrimidine-DNA glycosylase [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 397
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 175/295 (59%), Gaps = 15/295 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + +H +GKK+ +I +D+ V G + + A+++GK ++SA +
Sbjct: 1 MPEIAEVARVVHFLRQHLVGKKVRMAIAQEDSSVFGKVGTTGPEVAAALMGKKVVSAGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGV---AVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK WL L+ PP GMTG ++++G+ YK+ + D+WP KY+K +E +
Sbjct: 61 GKYFWLVLEKPPHLVMHLGMTGWVHLRGIKSAYTNYYKKMKPGEEDQWPPKYAKLQLETE 120
Query: 116 --DGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSKK 167
+ +E+++TD RRF ++RL++ P P+ E GPD +++ T + F ++ +
Sbjct: 121 GPNKVEVAYTDPRRFGRIRLVDCPGDEIRKHTPLVENGPDPVVDADVFTREYFAAKMTAR 180
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
++ IKALLLDQ+ ISGIGNWV DEVL+QA++HP + + S+ L +++V A+
Sbjct: 181 RVPIKALLLDQTVISGIGNWVGDEVLFQARLHPERYSNECSEAEVGRLYDAVRDVCRTAV 240
Query: 228 EVGADSSQFPSNWIFHSREKKPGKA--FVDGKKIDFITAGGRTTAYVPELQKLNG 280
+ DS +FP++W+F+ R K GK DG+ + F+T GGRT+ + P LQK G
Sbjct: 241 DELGDSDEFPAHWLFNYRWGKGGKPSRLPDGEPLAFVTVGGRTSCFAPALQKNKG 295
>gi|322711093|gb|EFZ02667.1| formamidopyrimidine-DNA glycosylase [Metarhizium anisopliae ARSEF
23]
Length = 372
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 203/368 (55%), Gaps = 45/368 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +G+KI + DD+ V G + ++ EA++ GK ++SA +
Sbjct: 1 MPEIAEVARIVHFLRLHLVGRKIASASAIDDSNVFGKVGTTGAEVEAALRGKQVVSAGNQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQYKRSAVKDTD--EWPSKYSKFFVEL 114
GK W+ LD PP FGMTG ++I+G A T Y + +KD++ WP K+ KF ++
Sbjct: 61 GKYFWITLDKPPHLVMHFGMTGWVHIRGEKTAYTNYYKK-MKDSELTTWPPKFWKFHLKT 119
Query: 115 DDG--LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDS----- 163
+ +E++FTD RRF +VRL++ P + P+ E GPD +++ D FT+
Sbjct: 120 EGKPEVEVAFTDARRFGRVRLVDCPGADIRKHTPLKENGPDPVID---TDRFTEEYLRGK 176
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
+ + + +KALLLDQ+ ISGIGNWVADE LYQAK+HP Q + S S L + I+ V
Sbjct: 177 MQARHVPVKALLLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAEIKKLYESIRYVC 236
Query: 224 EKALEVGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
+ A++ DS QFP +W+F+ R K +G+K+ FIT GGRT+ Y P++QK
Sbjct: 237 QTAVDKLGDSDQFPEHWLFNHRWGKGGKGSSSKLPNGEKLAFITVGGRTSCYAPKVQKKT 296
Query: 280 GVQAAKAVGKPRKQAPKGEDSKDDDKYNSGDESESDGEEI-AENVKSKKRQKLGGQVKQP 338
G A +P K ESD E + A+N + KK ++ G + +P
Sbjct: 297 GQVVPGAKAQPIK-------------------DESDEEMLPAKNPRKKKLEQDGVEGGEP 337
Query: 339 SPRKRKSK 346
+K+K++
Sbjct: 338 FTKKQKTR 345
>gi|115391091|ref|XP_001213050.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193974|gb|EAU35674.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 363
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 185/329 (56%), Gaps = 28/329 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG---VSASDFEASVLGKAILSAHR 57
MPEL EV I +H +GK + K + A ++ +I G SA++F+ ++ GK ++ A +
Sbjct: 1 MPELAEVFRIVHFIRQHLVGKTLTK-VSAQEDPIIYGKVGTSAAEFQKAMEGKKVVGAGQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD- 116
+GK W+ + SPP P FGM G + I+ A T Y R+ + EWP KY KF +E D
Sbjct: 60 QGKYFWIAMSSPPHPVMHFGMAGWLKIRD-ADTYYYRTDKPEDKEWPPKYWKFLLETDGE 118
Query: 117 -GLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKI 169
E +F D RR ++RL++ P + P+ E GPD +++ V E + L KK+
Sbjct: 119 PKTEAAFVDFRRLGRIRLVDCPADDIRNHTPLKENGPDPVVDKDIVTETWLANKLRSKKV 178
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L I V ++++
Sbjct: 179 PIKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQIKELNSAIHYVCSTSVDL 238
Query: 230 GADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAK 285
ADS +FP +W+F R +K A +G KI FIT GGRT+A VP +QK G AK
Sbjct: 239 LADSEKFPEHWLFKHRWSKGKKNVASALPNGDKITFITVGGRTSAVVPNVQKKTG-PVAK 297
Query: 286 AV----------GKPRKQAPKGEDSKDDD 304
V G RK+AP ++ D++
Sbjct: 298 DVNGNDTNGTDSGTKRKRAPAPKEESDEE 326
>gi|359476561|ref|XP_002268184.2| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
vinifera]
Length = 126
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 107/113 (94%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
N+WL+LDSPPFPSFQFGM GA+ IKGVAVT+YKRSAVKDTDEWPSKYSK F+E
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTKYKRSAVKDTDEWPSKYSKLFIE 113
>gi|225559783|gb|EEH08065.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 383
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 172/303 (56%), Gaps = 18/303 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK I + DD V G SA++F+ + GK I+ + ++
Sbjct: 1 MPELAEVARIVHYIRTYLVGKTITRVHAQDDPIVFGKAGTSAAEFKKHMEGKKIVGSGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE---WPSKYSKFFVELD 115
GK W+ + SPP P FGMTG + V T Y R+A +E WP K+ KF ++LD
Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVN-THYSRTAPSPKNEEPVWPPKFWKFRLQLD 119
Query: 116 D--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKK 167
D E +F D RR A+VRL++ P + P+ E GPD +L+ MT+D L+ K
Sbjct: 120 DSSNSEAAFVDPRRLARVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLASK 179
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
K+ IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q ++ + L I V ++
Sbjct: 180 KVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQIEQLHSAINYVCSMSV 239
Query: 228 EVGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQA 283
++ DS +FP++W+F R ++ + +G KI FIT GGRT+A VP +QK G A
Sbjct: 240 DLLGDSEKFPADWLFKHRWGKGKQNRSQKLPNGDKIVFITVGGRTSAVVPSVQKKTGPVA 299
Query: 284 AKA 286
A A
Sbjct: 300 ADA 302
>gi|330922902|ref|XP_003300019.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1]
gi|311326034|gb|EFQ91877.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1]
Length = 424
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 165/291 (56%), Gaps = 16/291 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG---VSASDFEASVLGKAILSAHR 57
MPE+ EV +++H +GK I + A D+ +I G SAS F+ ++ GK ++ A +
Sbjct: 1 MPEIAEVARVVHFLKKHIVGKTI-NIVTAQDDPIIYGKVGTSASAFQKAITGKKVVDARQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK WL LDS P P F GM G + K T Y RS + EWP K+ KF +++ +
Sbjct: 60 QGKYFWLVLDSQPHPLFHLGMAGWVEYKNEE-TGYYRSTKPEKTEWPPKFWKFVLQMKEE 118
Query: 118 LE--LSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKI 169
E ++F D RR A++RL++ D P+ E GPD +L+ +TVD L KK+
Sbjct: 119 PENEMAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDKSILTVDWLGKKLRSKKV 178
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
+KALLLDQ+ ISGIGNWV DEV+YQAK+HP Q + + S E L + I V + A+
Sbjct: 179 PVKALLLDQANISGIGNWVGDEVMYQAKLHPEQYSNTFSDEQIKALHEAIMYVCDTAVAA 238
Query: 230 GADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
DS FP +W+ R KK G+KI F+ GGRT+A VP +QK
Sbjct: 239 NGDSDLFPEHWLMKHRWGKGKKEASKLPTGEKITFLKVGGRTSAIVPSVQK 289
>gi|212542389|ref|XP_002151349.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces
marneffei ATCC 18224]
gi|210066256|gb|EEA20349.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces
marneffei ATCC 18224]
Length = 362
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 165/294 (56%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + +D+ V G SA++F+ ++ G ++ A ++
Sbjct: 1 MPELAEVARIVHFIRKHLVGKTLANVQAQNDDIVYGKVGTSAAEFQKAMQGNKVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + PP FGMTG + I+ A T Y R+ D EWP KY KF +E D+
Sbjct: 61 GKYFWITMSKPPHVVMHFGMTGWMKIRN-ADTYYYRTTNADDKEWPPKYWKFLLETDENP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E +F D RR A++RL++ P P+ E GPD + + +T++ D + K++
Sbjct: 120 KTEAAFVDPRRLARIRLVDCPADEIRQYTPLKENGPDPVTDKDILTIEWLQDKIKSKRVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQ+ ISGIGNW+ DE+LY +KIHP Q + +L+ E L I V ++ V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTDEQIKQLHTSIDYVCTTSVGVL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS QFP W+F R K K +G KI F+T GGRT+A VP +Q+ G
Sbjct: 240 ADSEQFPEEWLFKHRWGKGKKNQPSVLPNGNKIVFLTVGGRTSAVVPSVQRKTG 293
>gi|296085164|emb|CBI28659.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 107/113 (94%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
N+WL+LDSPPFPSFQFGM GA+ IKGVAVT+YKRSAVKDTDEWPSKYSK F+E
Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTKYKRSAVKDTDEWPSKYSKLFIE 113
>gi|426201665|gb|EKV51588.1| hypothetical protein AGABI2DRAFT_41042, partial [Agaricus bisporus
var. bisporus H97]
Length = 311
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 169/312 (54%), Gaps = 40/312 (12%)
Query: 6 EVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLR 65
EVE A R + K+I K ADD V GV++++F A + G+ ++ AHR GK ++
Sbjct: 1 EVERATRLLNALGADKEITKVETADDTIVYSGVTSTEFAACLTGRKVIRAHRYGKVFFME 60
Query: 66 LDSP-PFPSFQFGMTGAIY----IKGVAVTQYKRSAVKDT--DEWPSKYSKFFVELDD-- 116
L+ P FGMTG ++ +KG + T Y R A DT EWP ++ KF + L +
Sbjct: 61 LNGDGKHPVMHFGMTGMLHACFAVKGQSPTHY-REAPSDTAVSEWPPRWMKFILHLTNPK 119
Query: 117 ---GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK-ITIK 172
E++F D RR ++RL P + PPISELG D LL T EF K++ I IK
Sbjct: 120 NGQTTEIAFRDARRLGRIRLCASPHTEPPISELGFDPLLSMPTFSEFLTLFRKRRGIAIK 179
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LLLDQ++ +G+GNWVADEVLY A+IHP Q +LS+E L + I V E A V AD
Sbjct: 180 VLLLDQTFSAGVGNWVADEVLYHARIHPEQRCNTLSQEQLQVLHEKITYVCETATSVDAD 239
Query: 233 SSQFPSNWIFHSREKKPGK-------AFV-------------------DGKKIDFITAGG 266
SQFP NW+F R K K A V + I+++T GG
Sbjct: 240 DSQFPDNWLFQHRWGKGNKKRKHSPLALVSKIILYILRLYADHFQPSGEPATIEWVTVGG 299
Query: 267 RTTAYVPELQKL 278
RT+AYVPELQKL
Sbjct: 300 RTSAYVPELQKL 311
>gi|240276344|gb|EER39856.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces
capsulatus H143]
gi|325089797|gb|EGC43107.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces
capsulatus H88]
Length = 383
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 171/303 (56%), Gaps = 18/303 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK I K D V G SA++F+ + GK I+ + ++
Sbjct: 1 MPELAEVARIVHYICSNLVGKTITKVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE---WPSKYSKFFVELD 115
GK W+ + SPP P FGMTG + V T Y R+A +E WP K+ KF ++LD
Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVN-THYSRTAPSPKNEEPVWPPKFWKFRLQLD 119
Query: 116 D--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKK 167
D E +F D RRF +VRL++ P + P+ E GPD +L+ MT+D L+ K
Sbjct: 120 DSSNSEAAFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLTSK 179
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
K+ IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q ++ + L I + ++
Sbjct: 180 KVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQIEQLHSAINYICSMSV 239
Query: 228 EVGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQA 283
++ DS +FP++W+F R ++ + +G KI FIT GGRT+A VP +QK G A
Sbjct: 240 DLLGDSEKFPADWLFKHRWGKGKQNRSQNLPNGDKIVFITVGGRTSAVVPSVQKKTGPVA 299
Query: 284 AKA 286
A A
Sbjct: 300 ADA 302
>gi|390604079|gb|EIN13470.1| AtMMH-1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 346
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 166/294 (56%), Gaps = 16/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARR +E GK I + D+ V G + +F + G+ I R GK
Sbjct: 1 MPELPEVENARRVLEAVGKGKMIQRVDSVKDDIVFCGTTHDEFAKELEGRMITGVQRYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD--DG 117
++ LD FP FGMTG I I+G Y+ S+ K + +WP + KF + L DG
Sbjct: 61 LFYMELDGEGRFPVLHFGMTGMIQIQGQEPFHYQSSSRKVSAQWPPNFLKFVLHLGTPDG 120
Query: 118 ----LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
++++F D RR ++RL++ P + PPISELG D +L + EF+ + ++ IKA
Sbjct: 121 EQIAVQVAFCDARRLGRIRLVSSPMTSPPISELGFDPILSMPALSEFSSKVLRRSCPIKA 180
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLLDQ + +G+GNWVADE+LY ++IHP Q +LS+ L ++V A++ AD
Sbjct: 181 LLLDQGFSAGVGNWVADEILYHSRIHPEQRCHTLSELQLERLHTHTRQVCRVAVDADADH 240
Query: 234 SQFPSNWIFHSREKKPGKAFV---------DGKKIDFITAGGRTTAYVPELQKL 278
++FP++W+F R K K D I ++T GGRT+AYV ELQ+L
Sbjct: 241 TKFPADWLFIHRWGKGKKTGAKSSLKLPSGDPATIKWVTVGGRTSAYVAELQQL 294
>gi|67526343|ref|XP_661233.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4]
gi|40740647|gb|EAA59837.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4]
gi|259481842|tpe|CBF75741.1| TPA: formamidopyrimidine-DNA glycosylase, putative (AFU_orthologue;
AFUA_4G11930) [Aspergillus nidulans FGSC A4]
Length = 363
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 169/294 (57%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL E+ I +H +GK + K D+ V G SA++F+ ++ GK ++ ++
Sbjct: 1 MPELAEIYRIVHFIRQHLVGKTLAKVSTQHDDIVYGKVGTSAAEFQKAMEGKKVIGTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + SPP FGM G + I+ A T Y R+ + +WP KY KF +E D
Sbjct: 61 GKYFWITMTSPPHVVMHFGMAGWLKIRD-ADTYYYRTDKPEDKQWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
+E +F D RR A++RL++ P + P+ E GPD L++ +T + LS KK+
Sbjct: 120 KVEAAFVDFRRLARIRLVDCPAEEIRNYTPLKENGPDPLVDKDVVTKEWLGSKLSSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+KALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L I V + EV
Sbjct: 180 VKALLLDQAVISGIGNWMGDEILYHAKIHPEQYSNTLTDDQVKELHSSIHYVCSTSTEVL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS +FP +W+F R K K + +G+KI F+T GGRT+A VP +QK G
Sbjct: 240 ADSDKFPEHWLFKHRWSKGKKNKQSSLPNGEKITFLTVGGRTSAVVPSVQKKTG 293
>gi|336374427|gb|EGO02764.1| hypothetical protein SERLA73DRAFT_158544 [Serpula lacrymans var.
lacrymans S7.3]
Length = 364
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 190/366 (51%), Gaps = 47/366 (12%)
Query: 1 MPELP----EVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELP EVE A + GK I + +D V G+S DF + G+ + A
Sbjct: 1 MPELPGISPEVERAASLVRSVAKGKLIDRVETVEDPLVFSGISHEDFARELTGRTVKHAA 60
Query: 57 RKGKNLWLRLD-SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R GK +L LD + P F FGMTG + +KG Y +S V WP ++ KF + L
Sbjct: 61 RYGKLFFLELDGAGRMPVFHFGMTGMLQVKGQPCLHYGKSEV-----WPPRFMKFVLYLR 115
Query: 116 DG----------LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLS 165
DG +L+F+D RR ++RL P + PPI +LG D +L ++ F +
Sbjct: 116 DGDDHDGSNPAITQLAFSDARRLGRIRLSTSPLTEPPIVDLGFDPILSMPSLSVFNALVQ 175
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
K+ IKALLLDQS+ +G+GN++ADE+LY A++HP Q SLS + A L I +V
Sbjct: 176 KRTCPIKALLLDQSFSAGVGNYLADEILYHARVHPEQRCRSLSDDQTAALHHQIADVCRI 235
Query: 226 ALEVGADSSQFPSNWIFHSREKKPGKAFVDGK-------KIDFITAGGRTTAYVPELQKL 278
A+E AD S++P++W+F R K KA K I +IT GGRT+AYV ELQ+L
Sbjct: 236 AVEANADDSKYPAHWLFKHRWGKGKKAEHTMKLPSGAPATIRWITVGGRTSAYVSELQQL 295
Query: 279 NGVQAAKAVGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQP 338
+ + K K ED D +S E+ES G+++ + + +P
Sbjct: 296 SSAKTQKLDAK--------EDDSDLTPLSS--EAESSGDKVHNH----------EVILKP 335
Query: 339 SPRKRK 344
SPRKRK
Sbjct: 336 SPRKRK 341
>gi|347839801|emb|CCD54373.1| hypothetical protein [Botryotinia fuckeliana]
Length = 437
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 215/435 (49%), Gaps = 74/435 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV A I + +GK + DD V G SA++F+ ++ GK + A ++
Sbjct: 1 MPEIAEVARAVHYIRKSLVGKTLAVVKAQDDANVFGKVGTSAAEFQKALTGKKVEGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE-WPSKYSKFFVEL--D 115
GK W+ + SPP P F FGMTG +I+G + Y RS +D +E WP ++SKF ++ +
Sbjct: 61 GKYFWMIMSSPPHPVFHFGMTGWFHIRG-QDSYYYRSKNEDEEEVWPPRFSKFSLQTAGE 119
Query: 116 DGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKKI 169
+E +FTD RRF+++RL+N P+ E GPD +L+ +T + L+KK++
Sbjct: 120 PKVEAAFTDSRRFSRIRLVNCIAEAIRDTSPLKENGPDPVLDKDILTAEWLEQKLNKKQV 179
Query: 170 TIKALLLDQSYISGIGNWV--------------------------ADEVLYQAKIHPLQT 203
IKALLLDQ+ ISGIGNWV DE+LY A++HP Q
Sbjct: 180 PIKALLLDQANISGIGNWVGSVTLTFTSIRLFDYELSKMPLLFHSCDEILYNARLHPEQY 239
Query: 204 AVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSREKKPGK----AFVDGKKI 259
+ + + E L + + + A+++ ADSS+FP NW+F R K K A +G+KI
Sbjct: 240 SNTFTSEEIKRLHTSMMYICQTAVDLLADSSKFPDNWMFKHRWGKGKKDGPAALPNGEKI 299
Query: 260 DFITAGGRTTAYVPELQKLNGVQAAKAVGKPR-------KQAPKGEDSKDDDKYNSGDES 312
F+T GGRT+ VP +QK G A + K P + S K +S
Sbjct: 300 TFLTVGGRTSCVVPSVQKKTGAVAGDMKKRSTSSDSGDVKDVPVNKQSLRKRKAAVATKS 359
Query: 313 ESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSKESDTEDDDGGNDDDGGGSDDNAEEAP 372
E E+I E K K R + QVK+ + DDD G+
Sbjct: 360 EETDEDITERKKVKARSRKPIQVKE-----------EILDDDAGDIS------------- 395
Query: 373 KTKSGKVTKNKQAKA 387
K+GK+TK K +K+
Sbjct: 396 -IKAGKLTKEKTSKS 409
>gi|389640539|ref|XP_003717902.1| formamidopyrimidine-DNA glycosylase [Magnaporthe oryzae 70-15]
gi|351640455|gb|EHA48318.1| formamidopyrimidine-DNA glycosylase [Magnaporthe oryzae 70-15]
Length = 417
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 162/298 (54%), Gaps = 18/298 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GKK+VK DD V G + A++ + ++S +
Sbjct: 1 MPEIAEVARVAHFLRLHLVGKKVVKVSAQDDANVFGKVGTTGEAVVAALKNRKVVSVGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGV---AVTQYKRSAVKDTDEWPSKYSKFFVELD 115
GK W +D P GMTG +I+G YK+ + D+WP KY +F +E+
Sbjct: 61 GKYFWFVMDKAPHLVMHLGMTGWFHIRGARTAYTNYYKKQNPDEADQWPPKYWRFHLEVQ 120
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKI 169
DG +FTD RRF +VRL++ P + P+ E GPD +++ T + + +++
Sbjct: 121 DGTAAAFTDARRFGRVRLVDCPGATIRKHSPLVENGPDPVVDADVFTAEYLLAKMRSRRV 180
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
+KALLLDQ+ ISG+GNWVADEVL+QA++HP Q + S E A L I++V A +
Sbjct: 181 PVKALLLDQAVISGVGNWVADEVLFQARLHPEQLSHEFSDEQVARLHGTIRDVCVLACDK 240
Query: 230 GADSSQFPSNWIFHSREKKPGKA-------FVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS FP +W+F+ R K + G+++ F+T GGRT+ Y PELQK G
Sbjct: 241 LADSDLFPDDWLFNHRWGKGAASRTGEQARLPGGERLAFLTVGGRTSCYAPELQKKTG 298
>gi|70993580|ref|XP_751637.1| formamidopyrimidine-DNA glycosylase [Aspergillus fumigatus Af293]
gi|66849271|gb|EAL89599.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus
fumigatus Af293]
Length = 367
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 192/366 (52%), Gaps = 34/366 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + K +D+ V G SAS+F+ ++ GK ++SA ++
Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK WL ++ PP FGM G + I+ A T Y R + WP KY KF +E D
Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRD-ADTYYYRVEKPEDKTWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +++RL++ P P+ E GPD + + V E D L +K+
Sbjct: 120 KTEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ E L I + +++V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQIKQLHSSIHYICTTSVDVL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
ADS +FP +W+F R K K +G+KI F+T GGRT+A VP +Q
Sbjct: 240 ADSEKFPEHWLFKHRWGKGKKNKPSVLPNGEKIVFLTVGGRTSAVVPSVQ---------- 289
Query: 287 VGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSK 346
RK P D D+D +G ++E+ + + K + + K+P +K S+
Sbjct: 290 ----RKTGPVARDIDDED--TNGPKTETKRKRVTAVTKE---EDVNDDEKEPKSKKHGSR 340
Query: 347 ESDTED 352
+ED
Sbjct: 341 SGQSED 346
>gi|159125439|gb|EDP50556.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus
fumigatus A1163]
Length = 367
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 192/366 (52%), Gaps = 34/366 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + K +D+ V G SAS+F+ ++ GK ++SA ++
Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK WL ++ PP FGM G + I+ A T Y R + WP KY KF +E D
Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRD-ADTYYYRVEKPEDKTWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR +++RL++ P P+ E GPD + + V E D L +K+
Sbjct: 120 KTEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ E L I + +++V
Sbjct: 180 IKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQIKQLHSSIHYICTTSVDVL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
ADS +FP +W+F R K K +G+KI F+T GGRT+A VP +Q
Sbjct: 240 ADSEKFPEHWLFKHRWGKGKKNKPPVLPNGEKIVFLTVGGRTSAVVPSVQ---------- 289
Query: 287 VGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRKSK 346
RK P D D+D +G ++E+ + + K + + K+P +K S+
Sbjct: 290 ----RKTGPVARDIDDED--TNGPKTETKRKRVTAVTKE---EDVNDDEKEPKSKKHGSR 340
Query: 347 ESDTED 352
+ED
Sbjct: 341 SGQSED 346
>gi|402216981|gb|EJT97063.1| hypothetical protein DACRYDRAFT_91738 [Dacryopinax sp. DJM-731 SS1]
Length = 324
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 170/292 (58%), Gaps = 16/292 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE E A R ++++ I +DN V +S +F + + +L+AHR GK
Sbjct: 1 MPELPEAERATRLLQKYLKDGLITAVDTIEDNIVYSDISHEEFAKELTNRTVLNAHRYGK 60
Query: 61 NLWLRLDSPP----FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
WL LD+P P F GMTG I ++G Y R KD WP ++ KF + +
Sbjct: 61 VFWLELDAPTEESRHPVFHLGMTGMIQLQGQEPVWY-RVRPKDASAWPPRFMKFIIHVTP 119
Query: 117 ----GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
+ ++FTD RR ++RL ++P + PPI +LG D LL ++ F+ + K+ + IK
Sbjct: 120 PSGPAVHVAFTDARRLGRIRLRSNPCAQPPIIDLGFDPLLSMPSLPTFSSLMLKRNMPIK 179
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
ALLLDQS+ +G+GNWVADEVL+ A+IHP A L E + + ++ V E A+ V +D
Sbjct: 180 ALLLDQSFSAGVGNWVADEVLFHARIHPETRANELRPEEVKRVWEKVRWVCEVAVGVDSD 239
Query: 233 SSQFPSNWIFHSR----EKKPGKAFV-DGKK--IDFITAGGRTTAYVPELQK 277
S+FPS+W+F R +K GK + DG++ I +IT GGRT+AYV E+++
Sbjct: 240 GSRFPSDWLFRFRWGKGKKSTGKLLLPDGREGTIRWITVGGRTSAYVEEVKE 291
>gi|154287302|ref|XP_001544446.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408087|gb|EDN03628.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 383
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 171/303 (56%), Gaps = 18/303 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I + +GK I + D V G SA++F+ + GK I+ + ++
Sbjct: 1 MPELAEVARIVHYICTNLVGKTITQVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE---WPSKYSKFFVELD 115
GK W+ + SPP P FGMTG + V T Y R+A +E WP K+ KF ++LD
Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVN-THYSRTAPSPKNEESVWPPKFWKFRLQLD 119
Query: 116 D--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKK 167
D E +F D RRF +VRL++ P + P+ E GPD +L+ MT+D L+ K
Sbjct: 120 DSSNSEAAFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLASK 179
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
K+ +KALLLDQ+ ISGIGNW+ DE+LY AKIHP Q ++ + L I V ++
Sbjct: 180 KVPMKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTIPEAQIEQLHSAINYVCSMSV 239
Query: 228 EVGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQA 283
++ DS +FP++W+F R ++ + +G KI FIT GGRT+A VP +QK G A
Sbjct: 240 DLLGDSEKFPADWLFKHRWGKGKQNRSQKLPNGDKIVFITVGGRTSAVVPSVQKKTGPVA 299
Query: 284 AKA 286
A A
Sbjct: 300 ADA 302
>gi|407926350|gb|EKG19317.1| Ribosomal protein S13-like H2TH [Macrophomina phaseolina MS6]
Length = 424
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 171/299 (57%), Gaps = 16/299 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPE+ EV + +H +GK I +++ A ++ ++ G SAS F+ ++ GK +L A +
Sbjct: 1 MPEIGEVARIVHYLRKHVVGKTI-RAVRAQEDDIVYGKAGTSASAFQQALTGKKVLDARQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV-KDTDEWPSKYSKFFVELD- 115
+GK WL + P P FGM+G I V YK +A + EWP KY KF +E++
Sbjct: 60 QGKYFWLVMSEAPHPLMHFGMSGWIKFSNVDSAYYKPAAKGPEEQEWPPKYWKFVLEMEG 119
Query: 116 -DGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSKKK 168
+ E +F D RR A++RLL+ P V P+ E GPD +++ +TV+ + K+
Sbjct: 120 KEKCEAAFVDARRLARIRLLDAPGEELRKVSPLKENGPDPVIDKNILTVEWLAKKMRSKR 179
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+ +KALLLDQ+ ISG+GNWV DEVLYQAKIHP Q + + + +L + +V A E
Sbjct: 180 VPVKALLLDQANISGVGNWVGDEVLYQAKIHPEQYSNTFNDAQIKSLHDSLIKVCTVACE 239
Query: 229 VGADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAA 284
ADS +FP +W+ R KK + +G KI F+ GGRT+A VP +QK G AA
Sbjct: 240 TLADSEKFPEDWLMRYRWGKGKKDAQKLPNGAKITFLKVGGRTSAVVPSVQKKTGDVAA 298
>gi|358367007|dbj|GAA83627.1| formamidopyrimidine-dna glycosylase [Aspergillus kawachii IFO 4308]
Length = 374
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 167/294 (56%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV + +H +GK + K + +D+ + G +A++F+ ++ GK + A ++
Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + SPP FGM G + I+ A T Y R+ + EWP KY KF +E D
Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRD-ADTYYYRTDKPEDREWPPKYWKFLLETDGDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR A++RL++ P P+ E GPD + + V E L KK+
Sbjct: 120 KTEAAFVDFRRLARIRLVDCPAEEIRKYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+KALLLDQ+ ISGIGNW+ DE+LYQAKIHP Q + +L + L I + ++E+
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYQAKIHPEQYSNTLDDDQIKELHSAIHYICSTSVELL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS +FP++W+F R K K +G+KI F+T GGRT+A VP +QK G
Sbjct: 240 ADSEKFPADWLFKHRWSKGKKNTPSVLPNGEKITFLTVGGRTSAVVPSVQKKTG 293
>gi|409051255|gb|EKM60731.1| hypothetical protein PHACADRAFT_203883 [Phanerochaete carnosa
HHB-10118-sp]
Length = 355
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 163/292 (55%), Gaps = 12/292 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A + GK+I + +DN V + S+FE + G+ + R GK
Sbjct: 1 MPELPEVERAAALLRTLAKGKQIARVEAVEDNLVFSDTTHSEFEKELEGRTVKDVARYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--- 116
+ LD P FGMTG + +KG T YK + K + +WP ++ KF + + D
Sbjct: 61 VFYFDLDGDGRMPVLHFGMTGMLQVKGQLATYYKETPRKASTDWPPRFMKFILHIRDETT 120
Query: 117 --GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
E++F D RR +VRL+ P PPIS LG D +L ++ F + ++ IKAL
Sbjct: 121 GSTTEVAFLDARRLGRVRLVKSPLEEPPISALGFDPILSMPKLEPFKVQVLRRTCPIKAL 180
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS+ +G+GNWVADEVLY A+IHP + +L A L +V + A++V AD +
Sbjct: 181 LLDQSFSAGVGNWVADEVLYHARIHPERRCHTLDDTELAALHLQTHQVCQTAVDVNADDA 240
Query: 235 QFPSNWIFHSR----EKKPGKAFVDGK--KIDFITAGGRTTAYVPELQKLNG 280
+FP +W+F R +KK G+ I ++T GGRT+A+V ELQKL+G
Sbjct: 241 KFPGDWLFKHRWGKGKKKHTLLLPSGEPATIKWVTVGGRTSAFVAELQKLSG 292
>gi|327295530|ref|XP_003232460.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS
118892]
gi|326465632|gb|EGD91085.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS
118892]
Length = 387
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 179/330 (54%), Gaps = 29/330 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVSRIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V +
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIKELHSSINYVCSVS 238
Query: 227 LEVGADSSQFPSNWIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNG-- 280
+++ +SS FP++W+FH R K K G+ I F+T GGRT+A VP +QK G
Sbjct: 239 VDLKGESSDFPTDWLFHHRWNKGKKGAAGKLPSGEPIVFVTVGGRTSAVVPSVQKKGGEE 298
Query: 281 ------VQAAKAVGKPRKQAPKGEDSKDDD 304
+ KA+GK K PK + + DD
Sbjct: 299 EEEETDTKPKKAIGK-AKATPKVKAEEKDD 327
>gi|451999073|gb|EMD91536.1| hypothetical protein COCHEDRAFT_1194331 [Cochliobolus
heterostrophus C5]
Length = 432
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 163/290 (56%), Gaps = 14/290 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV +++H +GK I +DN V G SA+ F+ ++ GK IL A ++
Sbjct: 1 MPEIAEVARIVHFLKKHAVGKTIQAVKTQEDNIVYGKVGTSAAAFQKAMSGKKILDARQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK WL +D+ P P FGM+G + T Y R + EWP KY KF ++L +
Sbjct: 61 GKYFWLVMDTAPHPLMHFGMSGWMKFSNDE-TAYYRPTKPEEAEWPPKYWKFILQLQEEP 119
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E++F D RR A++RL++ D P+ E GPD +++ +TV+ + L K++
Sbjct: 120 KNEVAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPVIDKDILTVEWLSKKLKSKRVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+KALLLDQ+ ISGIGNWV DE++YQAK+HP Q + + S E L + V + A++
Sbjct: 180 VKALLLDQANISGIGNWVGDEIMYQAKLHPEQYSNTFSDEQVKRLHDAMMYVCDTAVQAN 239
Query: 231 ADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
DS FP +W+ R KK G+KI F+ GGRT+A VP +QK
Sbjct: 240 GDSDSFPQDWLMKHRWGKGKKEASKLPTGEKITFLKVGGRTSAIVPSVQK 289
>gi|238486134|ref|XP_002374305.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus
NRRL3357]
gi|220699184|gb|EED55523.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus
NRRL3357]
gi|391871771|gb|EIT80928.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus oryzae
3.042]
Length = 369
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 165/294 (56%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + K +D+ V G SAS+F+ ++ GK I+ A ++
Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + SPP FGM G + I+ A T Y R+ EWP KY KF +E D+
Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRN-ADTYYYRTDKPQDKEWPPKYWKFLLETDEDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTV--DEFTDSLSKKKIT 170
E +F D RR ++RL++ P P+ E GPD + + TV D L KK+
Sbjct: 120 KTEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+KALLLDQ+ ISGIGNW+ DE+LY A+IHP Q + +L+ + L + V ++++
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTDDQVKELHSALHYVCSISVDLL 239
Query: 231 ADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS +FP +W+F R +K +G KI F+T GGRT+A VP +QK G
Sbjct: 240 ADSEKFPEDWLFKYRWSKGKKNASPTLPNGDKITFLTVGGRTSAVVPSVQKKTG 293
>gi|121708175|ref|XP_001272051.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus
NRRL 1]
gi|119400199|gb|EAW10625.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus
NRRL 1]
Length = 369
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 184/342 (53%), Gaps = 19/342 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV + E+ +GK + K +D+ V G SAS+F+ ++ GK ++SA ++
Sbjct: 1 MPELAEVSRIVHFLSEYVVGKTLTKVTTTNDDIVYGKAGTSASEFQKAMEGKRVVSAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK W+ + PP FGM+G + GV T Y RS + +EWP K+ KF +E D
Sbjct: 61 GKYFWMIMSEPPHAVMHFGMSGWLKFDGVD-TYYYRSDKHEDEEWPPKHWKFLLETDGEP 119
Query: 117 GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E +F D RR ++V L++ P P+ GPD +L+ +T + + KK+
Sbjct: 120 KTEAAFVDVRRLSRVHLVDCPAEDIRKYSPLKNHGPDPILDKNILTEEWLAKKIKSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+K LLDQ+ ISGIGNW+ DE+LY AKI+P Q + +L+ E L I V A+ +
Sbjct: 180 VKVFLLDQANISGIGNWMGDEILYHAKIYPEQYSNTLTDEQIKQLYSSINYVCTTAVHLL 239
Query: 231 ADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
ADS QFP +W+F R +K +G+KI F+T GGRT+A VP +QK G AK
Sbjct: 240 ADSEQFPKDWLFKYRWGKGKKNHTSVLPNGEKIIFLTVGGRTSAVVPSVQKKTG-PVAKD 298
Query: 287 VGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKR 328
+ + PK E + K + E E + + + E K KK+
Sbjct: 299 ISEEDIDVPKSETKR---KRATAVEKEEEVDGVEEKPKPKKQ 337
>gi|169771323|ref|XP_001820131.1| formamidopyrimidine-DNA glycosylase [Aspergillus oryzae RIB40]
gi|83767990|dbj|BAE58129.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 369
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 165/294 (56%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +GK + K +D+ V G SAS+F+ ++ GK I+ A ++
Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK W+ + SPP FGM G + I+ A T Y R+ EWP KY KF +E D+
Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRN-ADTYYYRTDKPQDKEWPPKYWKFLLETDEDP 119
Query: 118 -LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTV--DEFTDSLSKKKIT 170
E +F D RR ++RL++ P P+ E GPD + + TV D L KK+
Sbjct: 120 KTEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+KALLLDQ+ ISGIGNW+ DE+LY A+IHP Q + +L+ + L + V ++++
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTDDQVKELHSALHYVCSISVDLL 239
Query: 231 ADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS +FP +W+F R +K +G KI F+T GGRT+A VP +QK G
Sbjct: 240 ADSEKFPEDWLFKYRWSKGKKNASPTLPNGDKITFLTVGGRTSAVVPSVQKKTG 293
>gi|392571854|gb|EIW65026.1| AtMMH-1 [Trametes versicolor FP-101664 SS1]
Length = 384
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 162/312 (51%), Gaps = 33/312 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE A + + E + K IV A+D V G+S ++F A + G+ + A R GK
Sbjct: 1 MPELPEVERATKLLREVAVSKTIVDIEAAEDTIVFSGISHTEFAAELKGRVVEDAQRYGK 60
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL- 118
+L L P FGMTG + +KG T Y+ + K + +WP ++ V L L
Sbjct: 61 VFYLTLSGEGRHPVMHFGMTGMLQVKGQLATYYRETPRKASTDWPPRFMTASVPLRTLLP 120
Query: 119 ------------------------ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEP 154
+++F D RR ++RL P + PPIS LG D +L
Sbjct: 121 SPLTVLLTKQFILHIKGPTDAETTQVAFLDARRLGRIRLCASPLTEPPISALGFDPILGM 180
Query: 155 MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT 214
+ D+F + K+ +KALLLDQS+ +G+GNWVADE+LY A++HP + LS E
Sbjct: 181 PSADDFKKGVRKRSCPVKALLLDQSFSAGVGNWVADEILYHARVHPEERCNVLSDEQLDA 240
Query: 215 LLKCIKEVIEKALEVGADSSQFPSNWIFHSREKKPGKA-----FVDGK--KIDFITAGGR 267
L K EV A+ V AD S FP +W+F R K K DGK I +IT GGR
Sbjct: 241 LFKQTSEVCRIAVSVNADDSLFPEDWLFKHRWGKGKKEKHTLKLPDGKPATIKWITVGGR 300
Query: 268 TTAYVPELQKLN 279
T+AYV ELQKL
Sbjct: 301 TSAYVAELQKLQ 312
>gi|326475689|gb|EGD99698.1| formamidopyrimidine-DNA glycosylase [Trichophyton tonsurans CBS
112818]
Length = 388
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 166/298 (55%), Gaps = 20/298 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V +
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIKELHSSINYVCSVS 238
Query: 227 LEVGADSSQFPSNWIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNG 280
+++ +SS FP++W+FH R K K G+ I F+T GGRT+A VP +QK G
Sbjct: 239 VDLKGESSDFPTDWLFHHRWNKGKKGATGKLPSGEPIVFVTVGGRTSAVVPSVQKKGG 296
>gi|326484609|gb|EGE08619.1| formamidopyrimidine-DNA glycosylase [Trichophyton equinum CBS
127.97]
Length = 388
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 166/298 (55%), Gaps = 20/298 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V +
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIKELHSSINYVCSVS 238
Query: 227 LEVGADSSQFPSNWIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNG 280
+++ +SS FP++W+FH R K K G+ I F+T GGRT+A VP +QK G
Sbjct: 239 VDLKGESSDFPTDWLFHHRWNKGKKGATGKLPSGEPIVFVTVGGRTSAVVPSVQKKGG 296
>gi|145229675|ref|XP_001389146.1| formamidopyrimidine-DNA glycosylase [Aspergillus niger CBS 513.88]
gi|134055255|emb|CAK43841.1| unnamed protein product [Aspergillus niger]
Length = 375
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 166/294 (56%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV + +H +GK + K + +D+ + G +A++F+ ++ GK + A ++
Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--DD 116
GK W+ + SPP FGM G + I+ A T Y R+ EWP KY KF +E D
Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRD-ADTYYYRTDKPGDKEWPPKYWKFLLETEGDP 119
Query: 117 GLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P + P+ E GPD + + V E L KK+
Sbjct: 120 KTEAAFVDFRRLGRIRLVDCPAEEIRNYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+KALLLDQ+ ISGIGNW+ DE+LYQAKIHP Q + +L + L I + ++E+
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYQAKIHPEQYSNTLDDDQIRELHSAIHYICSTSVELL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS +FP++W+F R K K +G+KI F+T GGRT+A VP +QK G
Sbjct: 240 ADSEKFPADWLFKHRWSKGKKNTPSVLPNGEKITFLTVGGRTSAVVPSVQKKTG 293
>gi|350638251|gb|EHA26607.1| hypothetical protein ASPNIDRAFT_172862 [Aspergillus niger ATCC
1015]
Length = 375
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 166/294 (56%), Gaps = 15/294 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV + +H +GK + K + +D+ + G +A++F+ ++ GK + A ++
Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--DD 116
GK W+ + SPP FGM G + I+ A T Y R+ EWP KY KF +E D
Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRD-ADTYYYRTDKPGDKEWPPKYWKFLLETEGDP 119
Query: 117 GLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
E +F D RR ++RL++ P + P+ E GPD + + V E L KK+
Sbjct: 120 KTEAAFVDFRRLGRIRLVDCPAEEIRNYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+KALLLDQ+ ISGIGNW+ DE+LY AKIHP Q + +L+ + L I + ++E+
Sbjct: 180 VKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQIRELHSAIHYICSTSVELL 239
Query: 231 ADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
ADS +FP++W+F R K K +G+KI F+T GGRT+A VP +QK G
Sbjct: 240 ADSEKFPADWLFKHRWSKGKKNTPSVLPNGEKITFLTVGGRTSAVVPSVQKKTG 293
>gi|315042754|ref|XP_003170753.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum
CBS 118893]
gi|311344542|gb|EFR03745.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum
CBS 118893]
Length = 390
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 165/298 (55%), Gaps = 20/298 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTISKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDE--FTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ V E + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V +
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIKELHSSINYVCSVS 238
Query: 227 LEVGADSSQFPSNWIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNG 280
+++ +SS FP++W+FH R K K G+ I F+T GGRT+A VP +QK G
Sbjct: 239 VDLKGESSDFPTDWLFHHRWNKGKKGAAGKLPSGEPIVFVTVGGRTSAVVPSVQKKGG 296
>gi|406863668|gb|EKD16715.1| BcatrD protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1101
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 166/292 (56%), Gaps = 14/292 (4%)
Query: 6 EVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLW 63
E+ +++ +GK + DD V G +A++F+ +++GK +L A ++GK W
Sbjct: 30 EIARIVHYLKKSLVGKTLSTVKAQDDANVFGKVGTTAAEFQKAMVGKKVLDAGQQGKYFW 89
Query: 64 LRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--GLELS 121
+ + SPP P F FGMTG +I+G + Y+ D D WP K+ KF +E + +E +
Sbjct: 90 MIMSSPPHPVFHFGMTGWFHIRGEPTSHYRPKETDDLDIWPPKFWKFALETNSEPKVEAA 149
Query: 122 FTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKITIKALL 175
FTD RRFA+VRL++ D P+ E GPD +++ +T D + KK + +KA +
Sbjct: 150 FTDARRFARVRLVDCAAEDIRKTTPLKENGPDPVIDKDVLTEDWLVTKMKKKHVPVKAFM 209
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ISGIGNWV DE++Y AK+HP Q + S+ L I+ V + A++ +DSS+
Sbjct: 210 LDQANISGIGNWVGDEIMYHAKLHPEQYTDTFSESEIRHLHASIRYVCQTAVDHLSDSSK 269
Query: 236 FPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQA 283
FP W+F R +K +G+KI F+T GGRT+ VP +QK G A
Sbjct: 270 FPEEWLFKHRWGKGKKDAATTLPNGEKITFLTVGGRTSCVVPSVQKKTGAVA 321
>gi|296807993|ref|XP_002844335.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae
CBS 113480]
gi|238843818|gb|EEQ33480.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae
CBS 113480]
Length = 392
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 173/319 (54%), Gaps = 24/319 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I +H +G I K + D+ + G SA +F+ + GK ++ ++
Sbjct: 1 MPELAEVARIVNYIRKHLVGHTIAKVVANHDDLLFGKVGTSAEEFKKHMQGKTVIGTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS K+ D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKNENFEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDE--FTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ V E + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +L L I V +
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQITELHSAINYVCSVS 238
Query: 227 LEVGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
+++ +SS FP++W+FH R +K G+ I F+T GGRT+A VP +QK NG
Sbjct: 239 VDLKGESSDFPTDWLFHHRWGKGKKGAAGKLPSGEAIVFVTVGGRTSAVVPSVQKKNGEV 298
Query: 283 A----AKAVGKPRKQAPKG 297
A +A KP+K A K
Sbjct: 299 ADGEEEEADTKPKKTAVKA 317
>gi|451848294|gb|EMD61600.1| hypothetical protein COCSADRAFT_123410 [Cochliobolus sativus
ND90Pr]
Length = 432
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 163/290 (56%), Gaps = 14/290 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV +++H +GK I +DN V G SA+ F+ ++ GK IL A ++
Sbjct: 1 MPEIAEVARIVHFLKKHAVGKTIQAVKTQEDNIVYGKVGTSAAAFQKAMSGKKILDARQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--DD 116
GK WL +++ P P FGM+G + T Y R + EWP KY KF ++L +
Sbjct: 61 GKYFWLVMETAPHPLMHFGMSGWMKFSNDE-TAYYRPTKPEEAEWPPKYWKFILQLQGEP 119
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
E++F D RR A++RL++ D P+ E GPD +++ +TV+ + L K++
Sbjct: 120 KNEVAFVDARRLARIRLVDADAEDMRKTTPLKENGPDPVIDKDILTVEWLSKKLKSKRVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+KALLLDQ+ ISGIGNWV DE++YQ+K+HP Q + + S E L + V + A++
Sbjct: 180 VKALLLDQANISGIGNWVGDEIMYQSKLHPEQYSNTFSDEQVKRLHDAMMYVCDTAVQAN 239
Query: 231 ADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
DS FP +W+ R KK G+KI F+ GGRT+A VP +QK
Sbjct: 240 GDSDSFPQDWLMKHRWGKGKKETSKLPTGEKITFLKVGGRTSAIVPSVQK 289
>gi|342320533|gb|EGU12473.1| Hypothetical Protein RTG_01507 [Rhodotorula glutinis ATCC 204091]
Length = 388
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 174/303 (57%), Gaps = 25/303 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAAR+ +E GK+I + +D V G + +F ++ GK + S R GK
Sbjct: 1 MPELPEVEAARKKLEGIAKGKRIKRVQAKEDTIVFAGTTHDEFIKALEGKTVESVKRLGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK---RSAVKDTDEWPSKYSKFFVELD-- 115
N +L L SPP P FGM+G +I+G Y+ SAV+ + EWP KY+K ++E +
Sbjct: 61 NFYLSLSSPPHPILHFGMSGQAHIRGEVPIAYRSSSSSAVEASQEWPPKYAKAWIEFEGE 120
Query: 116 --DGLELSFTDKRRFAKVRLL----NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+ E +F D RR +++L+ ++ VPP+SELG D LL ++D +L K+K
Sbjct: 121 GGEVAEWAFCDARRLGRIKLVDAEADEIEKVPPLSELGADPLLNMPSLDTLRTALGKRKA 180
Query: 170 TIKALLLDQSY-ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC----IKEVIE 224
IKA+LLDQ+ G+GN++ DE+LYQ+ IHP + LS S + LL I+ V+
Sbjct: 181 PIKAVLLDQNGPFCGLGNYLVDEILYQSAIHPSLPSTYLSLPSPSALLSTLHTQIQAVVN 240
Query: 225 KALEVGADSSQFPSNWIFHSR-----EKKPGKAFV--DG--KKIDFITAGGRTTAYVPEL 275
A+ V AD+ +FP +W+F R KK G F DG I F+T GGRT+A V ++
Sbjct: 241 TAVAVDADAEKFPKDWLFKFRWGKGKRKKEGDEFALPDGSTSTISFVTVGGRTSAVVDKV 300
Query: 276 QKL 278
Q L
Sbjct: 301 QVL 303
>gi|389751254|gb|EIM92327.1| hypothetical protein STEHIDRAFT_151658 [Stereum hirsutum FP-91666
SS1]
Length = 387
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 188/387 (48%), Gaps = 49/387 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A + +G++I K + DD V GV+ +F + + + + R GK
Sbjct: 1 MPELPEVHRAANLLRSLTLGRRITKVVTNDDTIVFAGVTHEEFAKELTNRTVTNVGRYGK 60
Query: 61 NLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--- 116
N ++ L+ P FGMTG + ++G Y+ + K + +WP ++ KF + ++
Sbjct: 61 NFYMELNEKCRTPVMHFGMTGMLQVRGELPIHYRETPRKASTDWPPRFMKFVMHIEPEDS 120
Query: 117 -------GLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
E++F D RR ++RL++ P PPIS LG D +L + F+ L K+
Sbjct: 121 TPSTPTVCTEIAFLDARRLGRIRLVSGSPLESPPISNLGFDPVLSMPDLPTFSSLLLKRS 180
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
IKALLL+QS+ +G+GNWVADEVLY A +HP Q +LS+E + K E+ A++
Sbjct: 181 CPIKALLLNQSFSAGVGNWVADEVLYHAGVHPEQRCRTLSEEQVEKVWKWTSEICRIAVD 240
Query: 229 VGADSSQFPSNWIFHSREKKPGKAFVDGKK-----------IDFITAGGRTTAYVPELQK 277
V AD +FP +W+F R K + I ++T GGRT+AYV ELQ+
Sbjct: 241 VNADDEKFPEDWLFKHRWGKGKSKKGKAAEALKLPSGEPATIKWVTVGGRTSAYVAELQQ 300
Query: 278 LNGVQAAKAVGKPRKQAPKGEDSKD----DDKYNSGDE---SESDGEEIAENVKSKKRQK 330
L P KD +D+ N D SE D E + K++
Sbjct: 301 L----------------PSSATVKDGILVNDEPNESDLTPISEPDTEIAVNTIGKKRKAS 344
Query: 331 LGGQVKQPSPRK---RKSKESDTEDDD 354
+ KQ P++ SK +D DD
Sbjct: 345 AATENKQTKPKRATCSNSKAADHATDD 371
>gi|358394767|gb|EHK44160.1| hypothetical protein TRIATDRAFT_16905, partial [Trichoderma
atroviride IMI 206040]
Length = 300
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 165/290 (56%), Gaps = 17/290 (5%)
Query: 14 IEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLWLRLDSPPF 71
+ + +GK I K+ DD+ V G S + E ++ G+ ++SA +GK W+ LD PP
Sbjct: 8 LNKRLVGKTIAKASAIDDSNVFGKVGTSGKEVEEALKGRTVISAGNQGKYFWITLDKPPH 67
Query: 72 PSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELDDG--LELSFTDKR 126
FGMTG ++I G YK+ D +WP K+ KF + D +E++FTD R
Sbjct: 68 LVMHFGMTGWVHINGEKTAYTNYYKKMKESDIAQWPPKFWKFQISTTDKEPVEVAFTDAR 127
Query: 127 RFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQSY 180
RF +VRL++ P P+ E GPD +++ T + + + + IKALLLDQ+
Sbjct: 128 RFGRVRLVDCPGDSIRKYSPLVENGPDPVVDKDIFTEEYLRGKIQSRHVPIKALLLDQTV 187
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNWVADE LYQ+KIHP Q + + S + A L + I+ V + A++ DS++FP +W
Sbjct: 188 ISGIGNWVADETLYQSKIHPEQYSDTFSGKEIARLHEAIRYVCQLAVDKLGDSNEFPEHW 247
Query: 241 IFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
+F+ R K K+ +G+K+ FIT GGRT+ Y P +QK G A A
Sbjct: 248 LFNHRWGKGDKSSAPKLPNGEKLAFITVGGRTSCYAPGVQKKTGAVVAGA 297
>gi|340514903|gb|EGR45161.1| predicted protein [Trichoderma reesei QM6a]
Length = 302
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 159/292 (54%), Gaps = 19/292 (6%)
Query: 14 IEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLWLRLDSPPF 71
+ + +GK I + DDN V G S + EA++ G+ ++S+ +GK W+ D PP
Sbjct: 8 LRQRLVGKTIASAAAIDDNSVFGKVGTSGKEVEAALKGRKVISSGSQGKYFWITFDKPPH 67
Query: 72 PSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELD----DGLELSFTD 124
FGMTG ++I G YK+ D +WP K+ KF + D D ++++FTD
Sbjct: 68 LVMHFGMTGWVHINGERTAYTNYYKKMKESDIAQWPPKFWKFHLTTDAKDGDPVQVAFTD 127
Query: 125 KRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQ 178
RRF +VRL++ P P+ E GPD +++ T D + + + +KA LLDQ
Sbjct: 128 ARRFGRVRLVDCPGDAIRQHSPLVENGPDPVVDKDIFTETYLRDKMKNRHVPVKAFLLDQ 187
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ISGIGNWVADE LYQAK+HP Q + + S L + I+ V + A++ DS QFP
Sbjct: 188 AMISGIGNWVADETLYQAKLHPEQYSDTFSAAEIKRLHEAIRYVCQLAVDKLGDSDQFPD 247
Query: 239 NWIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
+W+F R K K +G+KI FIT GGRT+ Y P +QK G + A
Sbjct: 248 HWLFKHRWGKGDKGAATKLPNGEKIAFITVGGRTSCYAPGVQKKTGAVVSGA 299
>gi|400600307|gb|EJP67981.1| formamidopyrimidine-DNA glycosylase [Beauveria bassiana ARSEF 2860]
Length = 400
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 168/310 (54%), Gaps = 23/310 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK+I + DD V G + + A++ GK ++SA +
Sbjct: 1 MPEIAEIARAVHFLRIHLVGKRIASAEAIDDANVFGKVGTTGAAVAAALTGKKVVSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELD 115
GK W+ L+ PP FGMTG I++K A T Y K+ + WP K+ KF + D
Sbjct: 61 GKYFWITLEQPPHLVMHFGMTGWIHVKNDKTAYTNYFKKMEDSEYTVWPPKFWKFHITTD 120
Query: 116 DGL--ELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+ L E++FTD RRF +VRLLN P P+ E GPD +++ D FT+ + K+
Sbjct: 121 EKLPVEIAFTDPRRFGRVRLLNCPGVDIRKHSPLVENGPDPVVDK---DRFTEEYLRGKM 177
Query: 170 T-----IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
T IKALLLDQS ISGIGNWVADE LY A++HP Q S + + I V
Sbjct: 178 TSRHVPIKALLLDQSMISGIGNWVADETLYHARVHPEQYCDDFSDSEIKKIYESICYVCN 237
Query: 225 KALEVGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
A+E DS +FP +W+F+ R K +G+K+ FIT GGRT+ + P +QK G
Sbjct: 238 LAVEKLGDSDEFPEHWLFNHRWGKGSKGSSSKLPNGEKLSFITVGGRTSCFAPAIQKKTG 297
Query: 281 VQAAKAVGKP 290
A A +P
Sbjct: 298 RVAGNAKTEP 307
>gi|440470413|gb|ELQ39484.1| formamidopyrimidine-DNA glycosylase [Magnaporthe oryzae Y34]
Length = 1306
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 156/281 (55%), Gaps = 24/281 (8%)
Query: 17 HCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAIL-SAHRKGKNLWLRLDSPPFPSFQ 75
H +GKK+VK DD V V + G+A++ S +GK W +D P
Sbjct: 914 HLVGKKVVKVSAQDDANVFGKVGTT-------GEAVVVSVGTQGKYFWFVMDKAPHLVMH 966
Query: 76 FGMTGAIYIKG--VAVTQY-KRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVR 132
GMTG +I+G A T Y K+ + D+WP KY +F +E+ DG +FTD RRF +VR
Sbjct: 967 LGMTGWFHIRGARTAYTNYYKKQNPDEADQWPPKYWRFHLEVQDGTAAAFTDARRFGRVR 1026
Query: 133 LLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQSYISGIGN 186
L++ P + P+ E GPD +++ T + + +++ +KALLLDQ+ ISG+GN
Sbjct: 1027 LVDCPGATIRKHSPLVENGPDPVVDADVFTAEYLLAKMRSRRVPVKALLLDQAVISGVGN 1086
Query: 187 WVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSRE 246
WVADEVL+QA++HP Q + S E A L I++V A + ADS FP +W+F+ R
Sbjct: 1087 WVADEVLFQARLHPEQLSHEFSDEQVARLHGTIRDVCVLACDKLADSDLFPDDWLFNHRW 1146
Query: 247 KKPGKA-------FVDGKKIDFITAGGRTTAYVPELQKLNG 280
K + G+++ F+T GGRT+ Y PELQK G
Sbjct: 1147 GKGAASRTGEQARLPGGERLAFLTVGGRTSCYAPELQKKTG 1187
>gi|320163662|gb|EFW40561.1| AtMMH-1 [Capsaspora owczarzaki ATCC 30864]
Length = 985
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 174/357 (48%), Gaps = 69/357 (19%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE+E AR + C GKK+V+ + +D V DGV+ F +G+ + R GK
Sbjct: 1 MPELPELERARNFLLLTCRGKKVVQVSVDEDTLVFDGVAPQQFAQQFVGRTVRDVKRHGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVA---VTQYKRSAVKDTDE--------------- 102
++W+ D +F FG+TG + K V + + D DE
Sbjct: 61 HIWIEFDGGSDAAFHFGLTGNFFFKSQTSGKVFKAHSGRLPDDDEASEERTQEENERIQE 120
Query: 103 -------------WPSKYSKFFVELD-------------------DG--------LELSF 122
PS Y + V+ D DG E SF
Sbjct: 121 KQTEQSLRSRGALTPSPYRRARVDFDYQPVDADIDASLSQSEEVHDGHWPPKDSKCEFSF 180
Query: 123 TDKRRFA--------KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
D+ R + ++R L D + PPI LG D L P+ F +L ++ + IKAL
Sbjct: 181 DDQSRLSFTNTCRLGRIRALADSWAEPPICFLGFDP-LTPVEQGAFNAALVRRNVPIKAL 239
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS+++G+GNWVADEVLYQA IHP Q +LS E A LL I+ V+ A+++ AD S
Sbjct: 240 LLDQSFLAGVGNWVADEVLYQAGIHPEQYTNTLSGEQLAALLDKIQSVVRIAVQLNADPS 299
Query: 235 QFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL-NGVQAAKAVGKP 290
++PS+W++H R K + + G+K+ F+ GGRT+A +P QK+ GV + G P
Sbjct: 300 KYPSDWLYHHRFSKDDQV-IGGEKLSFVAVGGRTSALLPSRQKIPRGVNVGASNGSP 355
>gi|452988509|gb|EME88264.1| hypothetical protein MYCFIDRAFT_192478 [Pseudocercospora fijiensis
CIRAD86]
Length = 427
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 170/298 (57%), Gaps = 22/298 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG---VSASDFEASVLGKAILSAHR 57
MPE+ EV + +H +G+ VKS A ++ ++ G SA F +V GK +L A +
Sbjct: 1 MPEIGEVARIVHYLRKHLVGR-TVKSCKAFNDDIVYGKVGCSADAFSKAVEGKKVLGAGQ 59
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTD--EWP--SKYSKFFVE 113
+GK +L DSPP GMTG I YK++ +D + +WP K++K+ ++
Sbjct: 60 QGKYFYLTFDSPPHSVMHLGMTGWIKFSTEETFYYKQAVEEDKEPEQWPPNEKWTKWLIK 119
Query: 114 LD-----DGLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLE--PMTVDEFTD 162
D + +E++F D RR ++RL++ P+ E GPD +++ +TVD ++
Sbjct: 120 CDKEGGREPVEVAFVDARRLGRIRLIDCEADKIRRESPLKENGPDPVIDKDTLTVDWLSE 179
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L++KK+ IKALLLDQ+ ISG+GNWVADE+LYQA+IHP Q + ++ + + V
Sbjct: 180 LLNRKKVPIKALLLDQANISGVGNWVADEILYQARIHPEQYCNTFDEDQINRIHDSLIGV 239
Query: 223 IEKALEVGADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
A E+ ADSS+FP +W+ R KK +G KI+ +T GGRT+A VP +QK
Sbjct: 240 CTTACELLADSSKFPEDWLMKYRWDKGKKEKNVLPNGNKIEHLTVGGRTSAIVPAVQK 297
>gi|302502465|ref|XP_003013223.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371]
gi|291176786|gb|EFE32583.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371]
Length = 408
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 166/318 (52%), Gaps = 40/318 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENVEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVA--------------------DEVLYQAKIHPLQTAVS 206
KK+ IKALLLDQ+ ISG+GNW+ DE+LY A+IHP Q + +
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGYVLHLLIYFPTTKEANAGSRDEILYHARIHPEQYSDT 238
Query: 207 LSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSREKKPGKA----FVDGKKIDFI 262
L L I V ++++ +SS FP++W+FH R K K G+ I F+
Sbjct: 239 LRDNQIKELHSSINYVCSVSVDLKGESSDFPTDWLFHHRWNKGKKGAAGKLPSGEPIVFV 298
Query: 263 TAGGRTTAYVPELQKLNG 280
T GGRT+A VP +QK G
Sbjct: 299 TVGGRTSAVVPSVQKKGG 316
>gi|194702244|gb|ACF85206.1| unknown [Zea mays]
gi|413943563|gb|AFW76212.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 229
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 117/155 (75%), Gaps = 8/155 (5%)
Query: 155 MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT 214
M+VD F DSL +KKI IKALLLDQS+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC
Sbjct: 1 MSVDSFLDSLGRKKIGIKALLLDQSFISGIGNWIADEVLYQSRIHPLQIASNLPRESCEA 60
Query: 215 LLKCIKEVIEKALEVGADSSQFPSNWIFHSR-EKKPGKAFVDGKKIDFITAGGRTTAYVP 273
L + I+EV++ A+EV AD +FP W+FH R KKPGK VDGKKI+FITAGGRTTAYVP
Sbjct: 61 LHQSIEEVVKYAVEVDADMDRFPKEWLFHHRWGKKPGK--VDGKKIEFITAGGRTTAYVP 118
Query: 274 ELQKLNGVQAAKAV-----GKPRKQAPKGEDSKDD 303
+LQKL G Q++K + G + +GED+ D
Sbjct: 119 QLQKLVGTQSSKTISVAENGDAKDSGTEGEDADAD 153
>gi|346323545|gb|EGX93143.1| formamidopyrimidine-DNA glycosylase, putative [Cordyceps militaris
CM01]
Length = 396
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 162/300 (54%), Gaps = 15/300 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPE+ E+ A + H +GK+I + DD V G + + A++ GK ++SA +
Sbjct: 1 MPEIAEIARAVHYLRIHLVGKRIASAEAIDDANVFGKVGTTGAAVAAALKGKKVVSAGTQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK W+ L+ PP FGMTG K +K+ + WP K+ KF + DD
Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGK-NDKTAYTNYFKKMEDSEYAVWPPKFWKFSIVTDDEP 119
Query: 117 GLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
+E++FTD RRF +VRL++ P P+ E GPD +++ T D ++ + +
Sbjct: 120 AVEVAFTDPRRFGRVRLVDCPGEAIRKHSPLVENGPDPVVDKDRFTEDYLRGKMTSRHVP 179
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKALLLDQ+ ISGIGNWVADE LY A++HP Q S L + I V + A+E
Sbjct: 180 IKALLLDQTMISGIGNWVADETLYHAQMHPEQYCDDFSDAEIKKLYESICYVCDLAVEKL 239
Query: 231 ADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
DS QFP +W+F+ R +K +G+K+ FIT GGRT+ + P +QK G AA A
Sbjct: 240 GDSDQFPEHWLFNHRWGKGDKNSPSKLPNGEKLSFITVGGRTSCFAPAIQKKTGRVAASA 299
>gi|452848456|gb|EME50388.1| hypothetical protein DOTSEDRAFT_165590 [Dothistroma septosporum
NZE10]
Length = 433
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 163/303 (53%), Gaps = 20/303 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID---GVSASDFEASVLGKAILSAHR 57
MPE+ EV + +H + + I + DD+ V G +A F ++ GK + SA +
Sbjct: 1 MPEIGEVARTVHYLRKHLVSRTIKTCVPFDDDIVYGKKGGTTAKAFSDALTGKKVTSAGQ 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD-TDEWPS--KYSKFFVEL 114
+GK +L SPP GM+G I YK++ KD +EWP K++KF ++
Sbjct: 61 QGKYFYLTFSSPPHAVLHLGMSGWIKYSTEETGYYKQAKKKDEQEEWPPNPKWTKFLLKC 120
Query: 115 D-----DGLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALL--EPMTVDEFTDS 163
+ + +E++F D RR ++ L++ P P+ E GPD ++ E +TV+ +
Sbjct: 121 EADGDREAVEVAFVDARRLGRIGLVDCPAEEIRQNSPMKENGPDPVVDKEKVTVEWLGEL 180
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
L KK++ +KALLLDQ+ ISG+GNWVADEVLYQAKIHP Q + + L + +V
Sbjct: 181 LGKKRVPVKALLLDQANISGVGNWVADEVLYQAKIHPEQYSNTFGNAEIKRLHDALIDVC 240
Query: 224 EKALEVGADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
A E ADSS+FP W+ R KK +G KI IT GGRT+A VP +QK G
Sbjct: 241 TTACETLADSSKFPDTWLMKYRWDKGKKDANVLPNGNKITHITVGGRTSAVVPAVQKKTG 300
Query: 281 VQA 283
A
Sbjct: 301 AVA 303
>gi|336271672|ref|XP_003350594.1| hypothetical protein SMAC_07911 [Sordaria macrospora k-hell]
gi|380089513|emb|CCC12612.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 416
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 180/352 (51%), Gaps = 23/352 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILS-AHR 57
MPE+ E+ A + H +GK + + DD V G A ++GK + +
Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVVKHAEAIDDANVFGKVGTDGPKMAADLIGKRLYQQGPK 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
+ + L PP FGMTG I+IKG YK+ + D+WP KY KF +
Sbjct: 61 ENTSGQLSQIMPPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIVT 120
Query: 115 DDGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDAL--LEPMTVDEFTDSLSKKK 168
++G E++FTD RRF +VR ++ P P+ E GPD + L+ T D + + ++
Sbjct: 121 EEGDEMAFTDPRRFGRVRAVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLRERMKSRR 180
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+ IKALLLDQ+ ISGIGNWVADEVLYQAK+HP Q S L + I+ V + A++
Sbjct: 181 VPIKALLLDQAVISGIGNWVADEVLYQAKLHPEQYCNDFSDAEIKQLYESIRYVCQTAVD 240
Query: 229 VGADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAA 284
+S QFP +W+F+ R K K +G K+ F+T GGRT+ Y P QK G +
Sbjct: 241 KLGNSDQFPDDWLFNYRWGKGSKNAHSHTPNGDKLAFLTVGGRTSCYAPARQKKTGQVVS 300
Query: 285 KAVGKPRKQAPKGEDSKDDDKYN------SGDESESDGEEI-AENVKSKKRQ 329
+P + A + + K + +E E+DG ++ E S+KR+
Sbjct: 301 GVKEEPLESAEEKDSPKKASRAKVAKSKVKSEEPEADGSKVKTEKAASRKRK 352
>gi|449304696|gb|EMD00703.1| hypothetical protein BAUCODRAFT_153147 [Baudoinia compniacensis
UAMH 10762]
Length = 455
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 160/302 (52%), Gaps = 27/302 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI-VKSIIADD---NKVIDGVSASDFEASVLGKAILSAH 56
MPE+ EV + +H +G+ I ADD KV G SA F+ G+ + A
Sbjct: 1 MPEIGEVARVVHYLRKHLVGRTINTCEAFADDIVYGKV--GCSADAFQQHATGRRVTGAD 58
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTD---EWPSKYSKFFVE 113
++GK ++ D PP FGMTG + YK++ K+ EWP KY+KF ++
Sbjct: 59 QQGKYFYMTFDKPPHAVMHFGMTGWMKFDAEETAYYKQAKEKEKGAEVEWPPKYAKFVLK 118
Query: 114 LD---------DGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVD 158
+ D L+ +F D RR A++RL++ P+ E GPD + + +TV+
Sbjct: 119 CEEETVDGRKRDPLQAAFVDARRLARIRLVDCEAEKIREESPLKENGPDPVRDKDIVTVE 178
Query: 159 EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC 218
T+ L +KK+ +KALLLDQ+ +SG+GNWVADEVLYQA+IHP Q + + E L
Sbjct: 179 WLTELLRRKKVPVKALLLDQANLSGVGNWVADEVLYQARIHPEQYSNTFDDEQIKRLHDA 238
Query: 219 IKEVIEKALEVGADSSQFPSNWIFHSR---EKKPGKAFVDGKKIDFITAGGRTTAYVPEL 275
+ V A+E ADS QFP W+ R KK +G+KI + GGRT+A VP +
Sbjct: 239 LIGVCTLAVETLADSKQFPETWLMKYRWDKGKKDANVLPNGEKIVHLKVGGRTSAIVPSV 298
Query: 276 QK 277
QK
Sbjct: 299 QK 300
>gi|171682424|ref|XP_001906155.1| hypothetical protein [Podospora anserina S mat+]
gi|170941171|emb|CAP66821.1| unnamed protein product [Podospora anserina S mat+]
Length = 314
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 161/299 (53%), Gaps = 20/299 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK I + DD V G + A++ G+ ++S+ +
Sbjct: 1 MPEIAEVARIVHFLRLHLVGKTIRTASAVDDQIVFGKAGTTGDAVSAALTGRKVISSGSQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE----WPSKYSKFFVE- 113
GK WL LD P FGMTG + I+GV T Y S +DTD WP KY+KF +
Sbjct: 61 GKLFWLVLDKAPHVVMHFGMTGWLQIRGVQ-TSYS-SLYRDTDTRVETWPPKYTKFHLTT 118
Query: 114 -LDDGLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDAL--LEPMTVDEFTDSLSK 166
+ +E++FTD RR A+VRL++ P S P+ E GPD + + T+ F
Sbjct: 119 TCNPAVEVAFTDYRRLARVRLVDCPGAHIRSHAPLKENGPDPVQDTDRFTLAYFQSKCRA 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
+ +KA+LL+Q +ISGIGNWV DEVL+Q++IHP Q L+ TL + I+ V + A
Sbjct: 179 SRAAVKAMLLNQKFISGIGNWVGDEVLFQSRIHPEQKCNHLTDAQTKTLYEVIRYVCQTA 238
Query: 227 LEVGADSSQFPSNWIFHSREKKPGK--AFVDGKKIDFITAGGRTTAYVPELQK--LNGV 281
+ V D QFPS+W+F R K + G+ + +T G RT+ Y LQK L+GV
Sbjct: 239 VGVLGDYHQFPSDWLFKYRWSKGSENPTLPGGEPLAHVTVGNRTSCYATRLQKITLDGV 297
>gi|392575829|gb|EIW68961.1| hypothetical protein TREMEDRAFT_15463, partial [Tremella
mesenterica DSM 1558]
Length = 339
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 176/340 (51%), Gaps = 50/340 (14%)
Query: 3 ELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRKGK 60
E EVE AR+ I + C G KI K + + ++K++ G + +F + G+ I RKGK
Sbjct: 1 ECIEVERARKLIYDTCRGYKI-KHVDSLEDKIVYTGGTTHDEFAREITGRTITGCERKGK 59
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIY-IKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL---- 114
WL L FP FGMTG I +KG Y+R + WP ++ KF ++L
Sbjct: 60 TFWLTLSGKGRFPVMHFGMTGMIQQLKGQEPNWYRRRRKESPTTWPPRFYKFVLDLEPQA 119
Query: 115 ----DDGLELSFTDKRRFAKVRLLNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
D+ EL+F D R ++RL+ P PP+S LG D +L +++EF L KKK
Sbjct: 120 GSVSDEPRELAFIDGARLGRLRLIPHPVIHHPPVSLLGFDPVLSMPSLEEFQKLLLKKKG 179
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
T+K +++DQ++ +G+GNWVADE+LYQA IHP LS++ L + I++V A+EV
Sbjct: 180 TVKGVIMDQAFSAGVGNWVADEILYQAHIHPSCPIPHLSEKDVENLHQWIRKVPLMAVEV 239
Query: 230 GADSSQFPSNWIFHSRE----------------------KKPGK-----------AFVDG 256
ADS QFP NW+F R + PG A +G
Sbjct: 240 NADSLQFPDNWLFRWRWGKGKKVKVAKGRKVKEESVEGGQPPGTEDVKPKDVEFLALPNG 299
Query: 257 K--KIDFITAGGRTTAYVPELQKL-NGVQAAKAVGKPRKQ 293
K I+FI GGRTTA V ELQK+ +GV + K +++
Sbjct: 300 KPATIEFIEVGGRTTALVKELQKMPDGVDIKPKISKGKRK 339
>gi|295669486|ref|XP_002795291.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226285225|gb|EEH40791.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 369
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 165/301 (54%), Gaps = 38/301 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I ++ +GK I K + DD V G +A++F+ + GK+I+ ++
Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD------TDEWPSKYSKFFV 112
GK W+ + SPP P FGMTG + +K V T Y R+ D + WPSK+ KF +
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVH-TYYYRAPASDKGNDRGEEPWPSKFWKFML 119
Query: 113 ELDD--GLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSL 164
ELDD E +F D RR +VRL++ P + P+ E GPD +++ +T+D +
Sbjct: 120 ELDDEPKTEAAFVDARRLGRVRLVDCPGADIRKYSPLKENGPDPIVDKDIVTLDWLRKKV 179
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
K++ IKALLLDQ+ ISGIGNW+ + L +++I L +A++ + LL
Sbjct: 180 LSKRVPIKALLLDQTNISGIGNWMGN-TLQESQIEQLYSAINYVCSTSVGLL-------- 230
Query: 225 KALEVGADSSQFPSNWIFHSREKKPGKA-----FVDGKKIDFITAGGRTTAYVPELQKLN 279
+S +FPSNW+F R K GK +G+KI FIT GGRT+A VP +QK
Sbjct: 231 ------GNSEEFPSNWLFSHRWSK-GKTNHSHKLPNGEKIVFITVGGRTSAIVPAIQKKT 283
Query: 280 G 280
G
Sbjct: 284 G 284
>gi|440479162|gb|ELQ59948.1| formamidopyrimidine-DNA glycosylase, partial [Magnaporthe oryzae
P131]
Length = 364
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 138/245 (56%), Gaps = 16/245 (6%)
Query: 52 ILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGV---AVTQYKRSAVKDTDEWPSKYS 108
++S +GK W +D P GMTG +I+G YK+ + D+WP KY
Sbjct: 1 VVSVGTQGKYFWFVMDKAPHLVMHLGMTGWFHIRGARTAYTNYYKKQNPDEADQWPPKYW 60
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEP--MTVDEFTD 162
+F +E+ DG +FTD RRF +VRL++ P + P+ E GPD +++ T +
Sbjct: 61 RFHLEVQDGTAAAFTDARRFGRVRLVDCPGATIRKHSPLVENGPDPVVDADVFTAEYLLA 120
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+ +++ +KALLLDQ+ ISG+GNWVADEVL+QA++HP Q + S E A L I++V
Sbjct: 121 KMRSRRVPVKALLLDQAVISGVGNWVADEVLFQARLHPEQLSHEFSDEQVARLHGTIRDV 180
Query: 223 IEKALEVGADSSQFPSNWIFHSREKKPGKA-------FVDGKKIDFITAGGRTTAYVPEL 275
A + ADS FP +W+F+ R K + G+++ F+T GGRT+ Y PEL
Sbjct: 181 CVLACDKLADSDLFPDDWLFNHRWGKGAASRTGEQARLPGGERLAFLTVGGRTSCYAPEL 240
Query: 276 QKLNG 280
QK G
Sbjct: 241 QKKTG 245
>gi|392597060|gb|EIW86382.1| S13-like H2TH domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 293
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 157/282 (55%), Gaps = 35/282 (12%)
Query: 71 FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE-----LSFTDK 125
P FGMTG + I+G QYK S K T+EWP ++ KF + L D + ++F D
Sbjct: 1 MPVLHFGMTGMLQIRGQPTLQYKASKHKHTEEWPPRFMKFAIHLVDTEDRSEAVVAFCDA 60
Query: 126 RRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIG 185
RR ++RL P PISELG D +L +++F S++++ +KALLLDQS+ +G+G
Sbjct: 61 RRLGRIRLAASPLKEAPISELGFDPILSMPALEKFAASVTRRSCPVKALLLDQSFSAGVG 120
Query: 186 NWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSR 245
N++ADE+LY A+IHP Q LS A+L I EV + A+EV AD S++P NW+FH R
Sbjct: 121 NYLADEILYHARIHPEQRINQLSIAQLASLHLQISEVCKIAVEVNADDSKYPGNWLFHHR 180
Query: 246 EKKPGKAFVDGK-------KIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGE 298
K KA K I +IT GGRT+AYV ELQ L+ +
Sbjct: 181 WGKGKKANHTMKLPSGEPATIKWITVGGRTSAYVAELQILS----------------HSK 224
Query: 299 DSKDDDK--YNSGDESE----SDGEEIAENVKSKKRQKLGGQ 334
D + D + + G+ESE S EE+++ + ++KR+ L Q
Sbjct: 225 DLRSDSQQGHPDGNESELTPLSSDEELSKGI-TRKRKPLDTQ 265
>gi|428173714|gb|EKX42614.1| hypothetical protein GUITHDRAFT_141036 [Guillardia theta CCMP2712]
Length = 330
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 154/305 (50%), Gaps = 58/305 (19%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFE---------------- 44
MPELPEVE ARR +E C+G + + DNKV +GV+ F+
Sbjct: 1 MPELPEVERARRVLERFCVGFVVKCCQVVQDNKVFEGVAPDTFKERMTGDQLAPCVLLLH 60
Query: 45 ---------------------------------ASVLGKAILSAHRKGKNLWLRLDSPPF 71
+ G IL+A RKGK+LWL L P+
Sbjct: 61 LLSRMLLLFAHDHRDCSRCDVKIPENVWQELCSCYIPGATILAARRKGKHLWLELKERPW 120
Query: 72 PSFQFGMTG---AIYIKGV-AVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRR 127
P GMTG A+ G V +Y S V D + WP K+ KF + +++G +++F RR
Sbjct: 121 PLIHLGMTGSFAAVSPDGTKEVAEYVNSRV-DAESWPPKFWKFRLVMENGNDVAFIAIRR 179
Query: 128 FAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNW 187
F +VR+ DP P+ +LG D L + + + +F D L + +K LLDQS+ +G+GNW
Sbjct: 180 FERVRMQQDPRRESPVKDLGFDPLTDMLPLADFKDELLSRSGPVKGALLDQSFCAGVGNW 239
Query: 188 VADEVLYQAKIHPLQTAVSLSKESCAT----LLKCIKEVIEKALEVGADSSQFPSNWIFH 243
+ADEVLYQA++HP + SLS E + + ++ VI KA E ADSS+FP +W+FH
Sbjct: 240 IADEVLYQARLHPQTPSSSLSLEQVKVEVEAVWQSLQMVIGKACEEEADSSKFPKDWLFH 299
Query: 244 SREKK 248
R K
Sbjct: 300 YRWNK 304
>gi|453089484|gb|EMF17524.1| Fapy_DNA_glyco-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 460
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 22/299 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID---GVSASDFEASVLGKAILSAHR 57
MPE+ EV + +H + + I +D V G A+ F + G+ ++ A +
Sbjct: 1 MPEIGEVARMVHYLRKHLVNRTIATCQAFEDAIVYGKKGGTDANAFSKHLKGRKVVGAGQ 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT--DEWPS--KYSKFFVE 113
+GK ++ LD PP GMTG I YKR+ D + WP K++K+ ++
Sbjct: 61 QGKYFYITLDKPPHSVMHLGMTGWIKCSVEETAYYKRAKEDDKMPEAWPPEPKWTKWLIK 120
Query: 114 LD-----DGLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTD 162
D + +EL+F D RR ++ L++ D + P+ E GPD ++ +TV+ +
Sbjct: 121 CDAEGDREAVELAFVDARRLGRISLVDCEADDIRNHSPLKENGPDPFIDKDIVTVEWLSK 180
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L+KK + +KALLL+QS +SGIGNWVADE+L+QAK+HP Q + + ++ L + +V
Sbjct: 181 LLNKKTVPVKALLLNQSNLSGIGNWVADEILFQAKLHPEQYSNTFDQQQIQQLHAALMDV 240
Query: 223 IEKALEVGADSSQFPSNWIFHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQK 277
A E ADSSQFP W+ R K K V+ G+KI+ IT GGRT+A+VP +QK
Sbjct: 241 TTIACETLADSSQFPETWLMRYRWDKGKKGDVNKLPSGEKIEHITVGGRTSAFVPSIQK 299
>gi|452822651|gb|EME29668.1| formamidopyrimidine-DNA glycosylase isoform 2 [Galdieria
sulphuraria]
Length = 389
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 162/293 (55%), Gaps = 17/293 (5%)
Query: 1 MPELPEVEAARRAIEEHC-IGKKIVKSI-IADDNKVI---DGVSASDFEASVLGKAILSA 55
MPEL +VE R+ I+EH + +V++I + D + +S V+ K ++
Sbjct: 1 MPELIQVEYFRQFIQEHLSLDTAVVENIYFSQDASSLFPKGHISMETIPIQVVHKKVIRV 60
Query: 56 HRKGKNLWLRLDSPP-FPSFQFGMTGAIY-------IKGVAVTQYKRSAVKDTDEWPSKY 107
R GK LWL L SP + F FGM+G++ ++ V ++ S ++ EWPS+Y
Sbjct: 61 QRYGKYLWLELSSPVVYIIFHFGMSGSLAHRKTDGSLEFAHVGKHYSSLIQ---EWPSQY 117
Query: 108 SKFFVELDDGLELSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSK 166
+K + DG EL+F + R++ KV P + I+ LG D +L T+ E D +
Sbjct: 118 AKLRLVFQDGSELAFLETRKWGKVVFTEQSPMQLSYITCLGFDPILSNPTIQELYDKIQS 177
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
K IK +LL+ S I+GIGNW+ADE+LY++KIHPL+ A LS +L + K+V+++
Sbjct: 178 YKSAIKTVLLNGSVIAGIGNWMADEILYKSKIHPLEWACLLSLNDVESLWEATKQVVQQG 237
Query: 227 LEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
+ V A+S +FP +W+FH R KK K + + GGRTT YV Q+L+
Sbjct: 238 VRVRANSDEFPKDWLFHLRWKKDKAQLGQQKGVKILQVGGRTTLYVASQQRLH 290
>gi|302695915|ref|XP_003037636.1| hypothetical protein SCHCODRAFT_231883 [Schizophyllum commune H4-8]
gi|300111333|gb|EFJ02734.1| hypothetical protein SCHCODRAFT_231883 [Schizophyllum commune H4-8]
Length = 267
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 153/276 (55%), Gaps = 22/276 (7%)
Query: 78 MTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDP 137
MTG I +KG A T Y S DEWP ++ KF + DG +L+F D RR ++RL DP
Sbjct: 1 MTGMIQVKGSAATYYISSKRLVGDEWPPRFMKFILHFFDGTQLAFMDARRLGRIRLCADP 60
Query: 138 TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAK 197
PISELG D +L + +F ++++K +KALLLDQS+ +G+GNWVADE+LY A+
Sbjct: 61 LHETPISELGFDPILSMPSRQDFEKLMTRRKCPVKALLLDQSFSAGVGNWVADEILYHAR 120
Query: 198 IHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSR-----EKKPGKA 252
+HP + +L+ E L + + EV A+E ADS +FP +W+F+ R + KP
Sbjct: 121 VHPERRCNTLTGEELDGLHRWMGEVCRIAVEADADSEKFPEDWLFNHRWDKGKKNKPQTM 180
Query: 253 FV---DGKKIDFITAGGRTTAYVPELQKLNGV--QAAKAVGKPRKQAPKGEDSKDDDKYN 307
+ + I ++T GGRT+AYV ELQK G+ A K G GE DD K
Sbjct: 181 TLPSGEPATIKWVTVGGRTSAYVDELQKAPGLPPNAVKTAGD------YGEVLNDDAK-- 232
Query: 308 SGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKR 343
S SD E A V S KR+KL K PRK+
Sbjct: 233 SVLTELSDEPEPATTV-SSKRKKLSNSRK---PRKK 264
>gi|380486925|emb|CCF38377.1| formamidopyrimidine-DNA glycosylase [Colletotrichum higginsianum]
Length = 475
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 164/334 (49%), Gaps = 57/334 (17%)
Query: 14 IEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGKNLWL------- 64
+ H +GKKI K DD V G S FE +V G+ ++S +GK W
Sbjct: 24 LRRHLLGKKIAKVSAPDDANVFGKVGTSGPAFEKAVKGRKVVSVGSQGKYFWYVFRPRIP 83
Query: 65 ----------------------------RLDSPPFPSFQFGM-----TGAIYIKG---VA 88
R ++P P + G I+IKG
Sbjct: 84 VHVGGSPAHESQDNLRQTASCGDALGHDRYEAPVAPPALLCLRADIAQGWIHIKGDKTAY 143
Query: 89 VTQYKRSAVKDTDEWPSKYSKFFVELDDG--LELSFTDKRRFAKVRLLNDP----TSVPP 142
YK+ + D WP KY KF +E DD + +FTD RRF ++RL+N P + P
Sbjct: 144 TNYYKKMKDGEADVWPPKYWKFQLETDDDPPVAAAFTDPRRFGRIRLVNCPGADIRNHSP 203
Query: 143 ISELGPDALLEPMTVDE--FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHP 200
+ E GPD +++ E F D + + + +KALLLDQS+ISGIGNWVADEVLYQ+++HP
Sbjct: 204 LKENGPDPVVDADVFTEAYFCDKMRSRHVPVKALLLDQSHISGIGNWVADEVLYQSRLHP 263
Query: 201 LQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSREKKPGK----AFVDG 256
Q + ++ L + ++ V + A++ DS +FP++W+F+ R K K A +G
Sbjct: 264 EQYCDTFAEAESRRLYEAVRYVCQTAVDKLGDSDEFPADWLFNYRWGKGSKDAASALPNG 323
Query: 257 KKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKP 290
+K+ FIT GGRT+ Y P QK G A A +P
Sbjct: 324 EKLAFITVGGRTSCYAPGRQKKTGQVVASAKEEP 357
>gi|426403713|ref|YP_007022684.1| hypothetical protein Bdt_1723 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860381|gb|AFY01417.1| hypothetical protein Bdt_1723 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 288
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 150/287 (52%), Gaps = 11/287 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD-DNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPE+ EVE RR +++ GK+I + I D D + A + + ++ G I RKG
Sbjct: 1 MPEIAEVETVRRHLDKALRGKRIKEVIYEDKDRHLFAFAPAKEVKKALEGARITGTGRKG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK---------YSKF 110
K WL LD P+P F GM+G I + R+ W + + +
Sbjct: 61 KYFWLELDRKPWPLFHLGMSGNISLLTDPSDARHRNIWGGKKLWSLEDESEHSMIWFCRL 120
Query: 111 FVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
+ LD +E++F+D RRF ++ L +DP P I++LG D LL+ T + L K+K +
Sbjct: 121 LLRLDKKIEMAFSDPRRFGRMWLTDDPWQHPRIAKLGFDPLLDFPTAKALYERLHKRKKS 180
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IK L+LDQ +GIGNW+ DE+L+QA+I P + A L+ T+ + V+ KA+ V
Sbjct: 181 IKGLMLDQGLFAGIGNWLGDEILFQARISPHRLASDLTLAEVTTIRRVTLSVVRKAIAVD 240
Query: 231 ADSSQFPSNWIFHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQ 276
AD +FP W+FH R K A G KI GRTTA+VP+ Q
Sbjct: 241 ADYERFPKTWLFHERWGKSKTAKTHKGHKIKHEDIAGRTTAWVPDWQ 287
>gi|340383395|ref|XP_003390203.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Amphimedon
queenslandica]
Length = 400
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 135/247 (54%), Gaps = 2/247 (0%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+K+V+ +D V G S + ++ G+ + + R GK
Sbjct: 1 MPELPEVERGRRLAQSVAKGRKLVRVFCKEDPIVFAGTSPRRWRRALEGRRVEAVRRWGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE--WPSKYSKFFVELDDGL 118
+W LD+ P P F FGM+G G+A + S E WP ++ K + DDG
Sbjct: 61 RIWFVLDAAPHPIFHFGMSGGFDAPGIAPLSLRTSPRSGEGEHRWPPRFLKILLRFDDGG 120
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
EL+ D RR + L DP + PI++LG D LL EF L +++ IK+LLLDQ
Sbjct: 121 ELAMFDARRLGSILLREDPENESPIADLGFDPLLAMPRPSEFFRLLQRRRRAIKSLLLDQ 180
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S+ +G+GNW+ADE LYQA I P A L + L + ++ KA+EV ADS ++P
Sbjct: 181 SFAAGVGNWIADEALYQAGIDPRCLASDLIEARSRRLRSKLLAIVRKAVEVDADSERYPR 240
Query: 239 NWIFHSR 245
W+FH R
Sbjct: 241 TWLFHRR 247
>gi|336387319|gb|EGO28464.1| hypothetical protein SERLADRAFT_458886 [Serpula lacrymans var.
lacrymans S7.9]
Length = 289
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 42/291 (14%)
Query: 71 FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG----------LEL 120
P F FGMTG + +KG Y +S V WP ++ KF + L DG +L
Sbjct: 1 MPVFHFGMTGMLQVKGQPCLHYGKSEV-----WPPRFMKFVLYLRDGDDHDGSNPAITQL 55
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F+D RR ++RL P + PPI +LG D +L ++ F + K+ IKALLLDQS+
Sbjct: 56 AFSDARRLGRIRLSTSPLTEPPIVDLGFDPILSMPSLSVFNALVQKRTCPIKALLLDQSF 115
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+G+GN++ADE+LY A++HP Q SLS + A L I +V A+E AD S++P++W
Sbjct: 116 SAGVGNYLADEILYHARVHPEQRCRSLSDDQTAALHHQIADVCRIAVEANADDSKYPAHW 175
Query: 241 IFHSREKKPGKAFVDGK-------KIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQ 293
+F R K KA K I +IT GGRT+AYV ELQ+L+ + K K
Sbjct: 176 LFKHRWGKGKKAEHTMKLPSGAPATIRWITVGGRTSAYVSELQQLSSAKTQKLDAK---- 231
Query: 294 APKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQPSPRKRK 344
ED D +S E+ES G+++ + + +PSPRKRK
Sbjct: 232 ----EDDSDLTPLSS--EAESSGDKVHNH----------EVILKPSPRKRK 266
>gi|395326032|gb|EJF58446.1| hypothetical protein DICSQDRAFT_67087, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 312
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 155/301 (51%), Gaps = 28/301 (9%)
Query: 6 EVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLR 65
EVE A R + E GK IVK +D V ++ DF + V G+A+ R GK ++
Sbjct: 1 EVERAARLLREVAKGKIIVKVDSDEDAIVFSKITHVDFASEVSGRAVKDVQRYGKVFYVE 60
Query: 66 LDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL-----DDGLE 119
L+ P FGMTG + +KG Y+ + K + +WP K+ KF + + ++ +
Sbjct: 61 LEGDGRHPVMHFGMTGMLQVKGELPMHYREAPRKASTDWPPKFMKFVLHIQGEDDEEAQQ 120
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
++F D RR ++RL P + PIS LG D ++ + F + K+ IKALLLDQS
Sbjct: 121 VAFLDPRRLGRIRLCKSPLTEAPISSLGFDPIISMPDFEYFEKGVLKRACPIKALLLDQS 180
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ +G+GNWVADE+LY A++HP + L+ + L EV A+ V AD SQFP +
Sbjct: 181 FSAGVGNWVADEILYHARVHPEERCNVLNGDQLQALYTQTAEVCRFAVSVNADDSQFPDD 240
Query: 240 WIFHSR------EKKPGKAFV--------------DGK--KIDFITAGGRTTAYVPELQK 277
W+F R EK K DGK I ++T GGRT+AYV ELQ
Sbjct: 241 WLFRHRWGKGKKEKHTLKLTSALRVITDRCLGPQPDGKPATIKWVTIGGRTSAYVAELQT 300
Query: 278 L 278
L
Sbjct: 301 L 301
>gi|154311839|ref|XP_001555248.1| hypothetical protein BC1G_05953 [Botryotinia fuckeliana B05.10]
Length = 381
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 196/410 (47%), Gaps = 78/410 (19%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV A I + +GK + DD V G SA++F+ ++ GK + A ++
Sbjct: 1 MPEIAEVARAVHYIRKSLVGKTLAVVKAQDDANVFGKVGTSAAEFQKALTGKKVEGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE-WPSKYSKFFVEL--D 115
GK W S +D +E WP ++SKF ++ +
Sbjct: 61 GKYFW-------------------------------SKNEDEEEVWPPRFSKFSLQTAGE 89
Query: 116 DGLELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEP--MTVDEFTDSLSKKKI 169
+E +FTD RRF+++RL+N P+ E GPD +L+ +T + L+KK++
Sbjct: 90 PKVEAAFTDSRRFSRIRLVNCIAEAIRDTSPLKENGPDPVLDKDILTAEWLEQKLNKKQV 149
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
IKALLLDQ+ ISGIGNWV DE+LY A++HP Q + + + E L + + + A+++
Sbjct: 150 PIKALLLDQANISGIGNWVGDEILYNARLHPEQYSNTFTSEEIKRLHTSMMYICQTAVDL 209
Query: 230 GADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAK 285
ADSS+FP NW+F R K K A +G+KI F+T GGRT+ VP +QK G A
Sbjct: 210 LADSSKFPDNWMFKHRWGKGKKDGPAALPNGEKITFLTVGGRTSCVVPSVQKKTGAVAGD 269
Query: 286 AVGKPR-------KQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGGQVKQP 338
+ K P + S K +SE E+I E K K R + QVK+
Sbjct: 270 MKKRSTSSDSGDVKDVPVNKQSLRKRKAAVATKSEETDEDITERKKVKARSRKPIQVKE- 328
Query: 339 SPRKRKSKESDTEDDDGGNDDDGGGSDDNAEEAPKTKSGKVTKNKQAKAV 388
+ DDD G+ K+GK+TK K +K+
Sbjct: 329 ----------EILDDDAGDIS--------------IKAGKLTKEKTSKST 354
>gi|322698696|gb|EFY90464.1| formamidopyrimidine-DNA glycosylase [Metarhizium acridum CQMa 102]
Length = 305
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 140/245 (57%), Gaps = 21/245 (8%)
Query: 66 LDSPPFPSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELDDG--LEL 120
+D PP FGMTG ++I+G YK++ + WP K+ KF ++ + +E+
Sbjct: 1 MDKPPHLVMHFGMTGWVHIRGEQTAYTNYYKKTKDSELKNWPPKFWKFQIKTEGKPEVEV 60
Query: 121 SFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDS-----LSKKKITI 171
+FTD RRF +VRL++ P + P+ E GPD +++ D FT+ + + + +
Sbjct: 61 AFTDARRFGRVRLVDCPGADIRKYTPLKENGPDPVID---TDRFTEEYLRGKMQARHVPV 117
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
KALLLDQ+ ISGIGNWVADE LYQAK+HP Q + S S L +CI+ V + A++
Sbjct: 118 KALLLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAEIKKLYECIRYVCQTAVDKLG 177
Query: 232 DSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAV 287
DS QFP +W+F+ R K +G+K+ FIT GGRT+ Y PE+QK G A
Sbjct: 178 DSDQFPEHWLFNHRWGKGGKGSSSKLPNGEKLAFITVGGRTSCYAPEVQKKTGQVVPGAK 237
Query: 288 GKPRK 292
+P K
Sbjct: 238 AQPIK 242
>gi|302659016|ref|XP_003021203.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517]
gi|291185091|gb|EFE40585.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517]
Length = 373
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 160/298 (53%), Gaps = 35/298 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPEL EV I++H +G I K + D+ + G SA +F+ + GK ++ A ++
Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD----TDEWPSKYSKFFVEL 114
GK W+ + SPP P FGMTG + I+ + Y RS KD D WP K+ KF +E
Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIR--SENTYYRSNGKDENFEADVWPPKFWKFLLET 118
Query: 115 DD--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSK 166
D+ E +F D RR +VRL++ P P+ E GPD +++ +T D + +
Sbjct: 119 DNEPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVRR 178
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
KK+ IKALLLDQ+ ISG+GNW+ D L ++I L ++++ V +
Sbjct: 179 KKVPIKALLLDQANISGLGNWMGD-TLRDSQIKELHSSINY--------------VCSVS 223
Query: 227 LEVGADSSQFPSNWIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNG 280
+++ +SS FP++W+FH R K K G+ I F+T GGRT+A VP +QK G
Sbjct: 224 VDLKGESSDFPTDWLFHHRWNKGKKGAAGKLPSGEPIVFVTVGGRTSAVVPSVQKKGG 281
>gi|302407804|ref|XP_003001737.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum
VaMs.102]
gi|261359458|gb|EEY21886.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum
VaMs.102]
Length = 390
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 157/297 (52%), Gaps = 43/297 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +G+ I K+ +D+KV G S FE +V G+
Sbjct: 1 MPEIAEVARCVHFLRHHLVGRTIAKATAPEDDKVFGKVGTSGPAFEKAVQGRK------- 53
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
+P G ++IKG YK+ ++ D WP KY KF +E +
Sbjct: 54 ------------YP-------GWVHIKGDKTAYTNYYKKMKPEEADLWPPKYWKFRLETE 94
Query: 116 DG--LELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP-MTVDEFTDS-LSKK 167
+E++FTD RRF +VRL++ P P+ E GPD +++ + +E+ S ++ +
Sbjct: 95 GTPKVEVAFTDPRRFGRVRLVDCPGDDIRKHTPLVENGPDPVVDAAIFTEEYMRSKMTSR 154
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+ IKALLLDQ++ISGIGNWVADEVLYQA +HP Q S + + ++ V + A+
Sbjct: 155 HVPIKALLLDQTHISGIGNWVADEVLYQANVHPEQYCDDFSDREIKAIYEKVRYVCQTAV 214
Query: 228 EVGADSSQFPSNWIFHSREKKPGKAFV----DGKKIDFITAGGRTTAYVPELQKLNG 280
+ DS +FP +W+F R K GK V +G+K+ FIT GGRT+ Y P QK G
Sbjct: 215 DKLGDSDEFPEDWLFKYRWGKGGKDAVSKLPNGEKLAFITVGGRTSCYAPSRQKKTG 271
>gi|342879494|gb|EGU80741.1| hypothetical protein FOXB_08781 [Fusarium oxysporum Fo5176]
Length = 376
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 169/328 (51%), Gaps = 31/328 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK+IV + DD V G S + E ++ GK + + +
Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIVSASAIDDKNVFGKVGTSGEEVETALKGKKVRNCLLQ 60
Query: 59 -GKNLWLRLDSPPFPSFQFGMTGAIYIK---GVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
N + LD + + ++IK YK+ + ++WP K+ KF +
Sbjct: 61 VALNKLIILDRFRRKPGEILLASWMHIKDEQTAYTNYYKKMKEGEHEQWPPKFWKFQFKT 120
Query: 115 DD--GLELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEP--MTVDEFTDSLSK 166
+ G+E++FTD RRF +VRL++ P P+ E GPD +++ T D +
Sbjct: 121 EGSPGIEVAFTDARRFGRVRLVDCPGDQIRKHSPLVENGPDPVVDHDRFTEDYLRSKMRA 180
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
+ + IKALLLDQ+ ISGIGNWVADE LYQAK+HP Q + ATL + I+ V + A
Sbjct: 181 RHVPIKALLLDQAMISGIGNWVADETLYQAKLHPEQYCDQFNDAQIATLYEMIRYVCQTA 240
Query: 227 LEVGADSSQFPSNWIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
++ DS +FP +W+F+ R K K +G+K+ FIT GGRT+ Y P +QK G
Sbjct: 241 VDKLGDSDEFPEHWLFNYRWGKGAKGAATKLPNGEKLAFITVGGRTSCYAPSVQKKTGNT 300
Query: 283 A-------------AKAVGKPRKQAPKG 297
A +KA K RK++P+
Sbjct: 301 APGIKEEPLEEKAESKAPKKSRKKSPEA 328
>gi|443926162|gb|ELU44885.1| AtMMH-1 [Rhizoctonia solani AG-1 IA]
Length = 726
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 187/381 (49%), Gaps = 55/381 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDF--EA---------SVL 48
MPELP VE A + +G+ I K +D V G ++ +F EA +
Sbjct: 306 MPELPGVERAAKLTRHVAVGRTIDKVETLEDTIVYTGGITHDEFAIEADGLWRRQAKEIT 365
Query: 49 GKAILSAHRKGKNLWLRLDSPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-K 106
G+ +L R GK ++ L+ P P GMT + + +R+ D WP +
Sbjct: 366 GRKVLDVGRYGKVFYIVLEGPGRMPVLHLGMTEPTWYR-------RRNKDLSADVWPPPR 418
Query: 107 YSKFFVELD-----DGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFT 161
+ KF + +L+F D RR A++RL +DP PISELG D +L +DEF
Sbjct: 419 FLKFIMHFSATDTQPPTQLAFIDARRLARIRLAHDPLKEHPISELGFDPILSMPELDEFK 478
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
+ K+ +KALLLDQS+ +G+GNWVADE+L+Q++IHP Q A +LS+ + K
Sbjct: 479 ALVVKRTCPVKALLLDQSFSAGVGNWVADEILFQSRIHPEQRASTLSEAQLQEMYTQTKS 538
Query: 222 VIEKALEVGADSSQFPSNWIFHSREKKPGK-----AFVDGK--KIDFITAGGRTTAYVPE 274
V + A+ V ADSSQFP +W+F R K K +G+ K+ ++T GGRT+A V +
Sbjct: 539 VCDIAVAVNADSSQFPKDWLFKYRWGKGEKNKTEMILPNGEKAKLKWLTVGGRTSALVEQ 598
Query: 275 LQKLNGVQAAKAVGKPRKQAPK-GEDSKDDDKYNSGDESESDGEEIAENVKSKKRQKLGG 333
LQK+ G+ R + P G+D+ + DK G A K KR+
Sbjct: 599 LQKM------PEGGRDRTKKPHAGQDTDEGDK--------QPGTSKAAPTKVGKRKAAAR 644
Query: 334 QVKQPSPRKRKSKESDTEDDD 354
KQ + +S ED D
Sbjct: 645 SAKQ-------ANDSPVEDGD 658
>gi|398410976|ref|XP_003856834.1| hypothetical protein MYCGRDRAFT_34505, partial [Zymoseptoria
tritici IPO323]
gi|339476719|gb|EGP91810.1| hypothetical protein MYCGRDRAFT_34505 [Zymoseptoria tritici IPO323]
Length = 383
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 162/298 (54%), Gaps = 22/298 (7%)
Query: 3 ELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRKGK 60
++ EV + +H + + I DD+ V G +A+ F + GK + A ++GK
Sbjct: 1 QIGEVARIVHYLRKHLVNRTIASCQGFDDDIVYGKVGCTATAFSQAFTGKRVSLAGQQGK 60
Query: 61 NLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD---TDEWPSKYSKFFVELD- 115
+L L +S GMTG I + T Y R KD T+EWP KY K+ +++D
Sbjct: 61 YFYLTLAESKVHSVLHLGMTGWIKFN-IEETGYYRQG-KDKPVTEEWPPKYVKWLMKIDA 118
Query: 116 ----DGLELSFTDKRRFAKVRLL----NDPTSVPPISELGPDALLEP--MTVDEFTDSLS 165
+ LE++F D RR A++RL+ + V P+ E GPD +++ +T++ T +
Sbjct: 119 EGEREALEVAFVDPRRLARIRLVECEAGEIRRVSPLKENGPDPVIDKDIVTLEWMTALMR 178
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
+KK+ +K LLLDQ+ ISG+GNWVADEVLYQA++HP Q + + S E L + EV
Sbjct: 179 RKKVPVKGLLLDQANISGVGNWVADEVLYQARLHPEQYSNTFSDEEIGRLRDALLEVTGI 238
Query: 226 ALEVGADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
A +DS QFPS+W+ R KK +G+KI +T GRT+A VP +QK G
Sbjct: 239 ACATLSDSEQFPSDWLMKHRWDKGKKASNVLPNGEKIVHLTVSGRTSAIVPSVQKKTG 296
>gi|169607899|ref|XP_001797369.1| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15]
gi|160701516|gb|EAT85665.2| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15]
Length = 1230
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 156/290 (53%), Gaps = 25/290 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ E+ ++ + +GK I +D+ + G SAS F+ ++ GK IL A ++
Sbjct: 1 MPEIAEISRIVHYLKRYVVGKTIGAVKTQEDDIIYGKVGTSASAFQKAMTGKKILDARQQ 60
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL--DD 116
GK WL +DS P FGM+G + + Y R A + +EWP +Y KF +E+ D
Sbjct: 61 GKYFWLVMDSQPHALMHFGMSGWMKFSNDD-SAYYRPAKAEEEEWPPRYWKFVLEMKEDP 119
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEP--MTVDEFTDSLSKKKIT 170
+E++F D RR A++RL++ D + P+ E GPD +L+ +TV+ L K
Sbjct: 120 KIEVAFVDPRRLARIRLVDAKAEDMRNTTPLKENGPDPVLDKDVLTVEWLGKKLRKT--- 176
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
S ISGIGNWV DE++YQAK+HP Q + + S E L + V + A++
Sbjct: 177 --------SNISGIGNWVGDEIMYQAKLHPEQYSNTFSDEQIKQLHDAMMYVCDTAVKHL 228
Query: 231 ADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
A+S +FP++W+ R KK +G+ I F+ GGRT+A V +QK
Sbjct: 229 AESDKFPADWLMKYRWGKGKKDANKLPNGQTISFLKVGGRTSAIVASVQK 278
>gi|340939277|gb|EGS19899.1| DNA-(apurinic or apyrimidinic site) lyase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 373
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 127/215 (59%), Gaps = 14/215 (6%)
Query: 80 GAIYIKG---VAVTQYKRSAVKDTDEWPSKYSKF-FVELDDGLELSFTDKRRFAKVRLLN 135
G I+I+G YKR + +D WP KY KF + D +E++FTD RRF +VRL++
Sbjct: 20 GWIHIRGEQTAYTNYYKRMSDEDKAAWPPKYWKFHLITEDPAVEVAFTDPRRFGRVRLVD 79
Query: 136 DP----TSVPPISELGPDALLEP--MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVA 189
P P+ E GPD +++P T + D + + + IKALLLDQ+ ISGIGNWVA
Sbjct: 80 CPGDSIRKFSPLVENGPDPVVDPEVFTEEYLRDKMRSRHVPIKALLLDQTVISGIGNWVA 139
Query: 190 DEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSREKKP 249
DE LY A++HP Q + E L + I+ V + A++ DS QFP++W+FH R K
Sbjct: 140 DETLYHARLHPEQYCDDFNDEQIKQLYESIRYVCQFAVDKLGDSDQFPADWLFHYRWGKG 199
Query: 250 GKAFV----DGKKIDFITAGGRTTAYVPELQKLNG 280
K V G+K+ ++T GGRT+ YVPE QK +G
Sbjct: 200 SKGAVGHLPSGEKLAWLTVGGRTSCYVPERQKKSG 234
>gi|358056002|dbj|GAA98347.1| hypothetical protein E5Q_05032 [Mixia osmundae IAM 14324]
Length = 765
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 162/299 (54%), Gaps = 18/299 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPEL EVE AR +E +GK I + +D V + +DF A +L + + R GK
Sbjct: 375 MPELAEVERARGILERVSLGKTITQCQTLEDTIVYADATHTDFAAELLDRRVELVGRTGK 434
Query: 61 NLWLRLDSPPFPS----FQFGMTGAIYIKGVAVTQYKRSAVKDTDE----WPSKYSKFFV 112
++ L P P+ + FGM+GA I+G Y++ + + WP ++ K +
Sbjct: 435 QFYMVLSHPSKPTVSALWHFGMSGACQIRGEESNYYRKKPKNELNSDGAPWPPRFWKACL 494
Query: 113 ELDDGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
DDG E +F D RR ++RL+ +DP PP+S L PDALL+ V EF +L K+
Sbjct: 495 TFDDGSEWAFMDARRLGRIRLIRDSDPRLHPPMSLLAPDALLDLPPVPEFATALRKRTAP 554
Query: 171 IKALLLDQS-YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
+KA+LLDQ+ +SG+GNW+ DE YQ++IHP Q +L + L + I+ V++ A+E
Sbjct: 555 VKAILLDQNGVVSGLGNWLVDEFFYQSRIHPGQRGATLHDDQIEALHETIRYVLKTAVEA 614
Query: 230 GADSSQFPSNWIFHS-----REKKPGKAFVDGKK--IDFITAGGRTTAYVPELQKLNGV 281
AD FP W+F + R K P VDG I F T GGRTTA V LQKL +
Sbjct: 615 NADHRTFPKTWLFANRWGKGRAKAPEVTLVDGSTAPITFETIGGRTTAIVKSLQKLRAL 673
>gi|346970952|gb|EGY14404.1| formamidopyrimidine-DNA glycosylase [Verticillium dahliae VdLs.17]
Length = 371
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 148/297 (49%), Gaps = 62/297 (20%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV + H +GK I K +D+KV G S FE +V G+ ++
Sbjct: 1 MPEIAEVARCVHFLRHHLVGKTIAKVTALEDDKVFGKVGTSGPAFEKAVQGRKVMKP--- 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
++ D WP KY KF +E +
Sbjct: 58 ---------------------------------------EEADHWPPKYWKFRLETEGTP 78
Query: 118 -LELSFTDKRRFAKVRLLNDP----TSVPPISELGPDALLEPMTVDEFTDSLSKKKIT-- 170
+E++FTD RRF +VRL++ P P+ E GPD +++ VD FT+ + K+T
Sbjct: 79 KVEVAFTDPRRFGRVRLVDCPGDDIRKHTPLVENGPDPVVD---VDMFTEEYMRSKMTSR 135
Query: 171 ---IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
IKALLLDQ++ISGIGNWVADEVLYQAK+HP Q S + + ++ V + A+
Sbjct: 136 HVPIKALLLDQTHISGIGNWVADEVLYQAKVHPEQYCDDFSDREIRAIYEKVRYVCQTAV 195
Query: 228 EVGADSSQFPSNWIFHSREKKPGKAFV----DGKKIDFITAGGRTTAYVPELQKLNG 280
+ DS +FP +W+F R K GK V +G+K+ FIT GGRT+ Y P Q+ G
Sbjct: 196 DKLGDSDEFPEDWLFKYRWGKGGKDAVSKLPNGEKLAFITVGGRTSCYAPSRQQKTG 252
>gi|297805248|ref|XP_002870508.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316344|gb|EFH46767.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 108
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 89/102 (87%)
Query: 77 GMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLND 136
M AIYIKGVAVT+YKRSAVK ++EWPSKYSKF V+LDDGLELS TDKRR AKVRLL +
Sbjct: 6 SMADAIYIKGVAVTKYKRSAVKVSEEWPSKYSKFLVQLDDGLELSITDKRRLAKVRLLAN 65
Query: 137 PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
PTSV PISEL P+ALLEPMTV+EF SL+KKKITIK LLLDQ
Sbjct: 66 PTSVSPISELHPNALLEPMTVEEFAASLAKKKITIKPLLLDQ 107
>gi|307103677|gb|EFN51935.1| hypothetical protein CHLNCDRAFT_9497 [Chlorella variabilis]
Length = 150
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%)
Query: 130 KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVA 189
+VR L+ P VPPISELG D LL+ ++ F L ++ IKA+LLDQS+ +GIGNWVA
Sbjct: 1 QVRFLDRPEGVPPISELGWDPLLDMPSLPSFAAQLGGQRRAIKAVLLDQSFSAGIGNWVA 60
Query: 190 DEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSREKKP 249
DEVLYQA+IHP Q A S+ +E A L + I V + A EV ADSS+FP +W+FH R
Sbjct: 61 DEVLYQARIHPEQPAHSVPQEQVAALHRAISHVCQVACEVEADSSRFPPDWLFHHRWGNS 120
Query: 250 GKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
A V G+ ID +T GGRT+A+VP LQKL+
Sbjct: 121 TPAKVGGRSIDHLTVGGRTSAFVPSLQKLD 150
>gi|156060539|ref|XP_001596192.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980]
gi|154699816|gb|EDN99554.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 389
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 157/297 (52%), Gaps = 44/297 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPE+ EV A I ++ +GK + DD V G SA++F+ ++ GK +
Sbjct: 1 MPEIAEVARAVHHIRKNLVGKTLAIVKAQDDANVFGKVGTSAAEFQKALTGKKV------ 54
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDE---WPSKYSKFFVELD 115
+ T I ++ KD E WP K+SKF ++
Sbjct: 55 -------------DDYVLAATSGISLR--------HDGSKDEGEKEVWPPKFSKFSLQTA 93
Query: 116 D--GLELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEP--MTVDEFTDSLSKK 167
+ ++ +FTD RRF+++RL++ + P+ E GPD +++ +T + L+KK
Sbjct: 94 EEPKVDAAFTDSRRFSRIRLVDCVAGAIRNTTPLKENGPDPVIDKDILTAEWLEQKLNKK 153
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
++ IKALLLDQ+ ISGIGNWV DE+LY+A++HP Q + + S E L + + + A+
Sbjct: 154 QVPIKALLLDQANISGIGNWVGDEILYRARLHPEQYSNTFSSEEIKRLHASMMYICQTAV 213
Query: 228 EVGADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
++ ADSS+FP +W+F R K K A +G+KI F+T GGRT+ VP +QK G
Sbjct: 214 DLLADSSKFPDDWMFKHRWGKGKKDGPTALPNGEKITFLTVGGRTSCVVPSVQKKTG 270
>gi|413943564|gb|AFW76213.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 139
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 92/116 (79%), Gaps = 3/116 (2%)
Query: 155 MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT 214
M+VD F DSL +KKI IKALLLDQS+ISGIGNW+ADEVLYQ++IHPLQ A +L +ESC
Sbjct: 1 MSVDSFLDSLGRKKIGIKALLLDQSFISGIGNWIADEVLYQSRIHPLQIASNLPRESCEA 60
Query: 215 LLKCIKEVIEKALEVGADSSQFPSNWIFHSRE-KKPGKAFVDGKKIDFITAGGRTT 269
L + I+EV++ A+EV AD +FP W+FH R KKPGK VDGKKI+FITAGGR
Sbjct: 61 LHQSIEEVVKYAVEVDADMDRFPKEWLFHHRWGKKPGK--VDGKKIEFITAGGRVN 114
>gi|452822652|gb|EME29669.1| formamidopyrimidine-DNA glycosylase isoform 1 [Galdieria
sulphuraria]
Length = 363
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 149/292 (51%), Gaps = 41/292 (14%)
Query: 1 MPELPEVEAARRAIEEHC-IGKKIVKSI-IADDNKVI---DGVSASDFEASVLGKAILSA 55
MPEL +VE R+ I+EH + +V++I + D + +S V+ K ++
Sbjct: 1 MPELIQVEYFRQFIQEHLSLDTAVVENIYFSQDASSLFPKGHISMETIPIQVVHKKVIRV 60
Query: 56 HRKGKNLWLRLDSPP-FPSFQFGMTGAIY-------IKGVAVTQYKRSAVKDTDEWPSKY 107
R GK LWL L SP + F FGM+G++ ++ V ++ S ++ EWPS+Y
Sbjct: 61 QRYGKYLWLELSSPVVYIIFHFGMSGSLAHRKTDGSLEFAHVGKHYSSLIQ---EWPSQY 117
Query: 108 SKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKK 167
+K P + I+ LG D +L T+ E D +
Sbjct: 118 AKL-------------------------SPMQLSYITCLGFDPILSNPTIQELYDKIQSY 152
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
K IK +LL+ S I+GIGNW+ADE+LY++KIHPL+ A LS +L + K+V+++ +
Sbjct: 153 KSAIKTVLLNGSVIAGIGNWMADEILYKSKIHPLEWACLLSLNDVESLWEATKQVVQQGV 212
Query: 228 EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
V A+S +FP +W+FH R KK K + + GGRTT YV Q+L+
Sbjct: 213 RVRANSDEFPKDWLFHLRWKKDKAQLGQQKGVKILQVGGRTTLYVASQQRLH 264
>gi|354543096|emb|CCE39814.1| hypothetical protein CPAR2_602320 [Candida parapsilosis]
Length = 391
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 180/378 (47%), Gaps = 80/378 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS--------DFEASVLGKAI 52
MPE+ EV ++ + +G +I ++ D + + S D ++ +LG I
Sbjct: 1 MPEVAEVAHVCALLKRNVLGFRIKNVNLSLDTLLFPILKESKHPDAELEDIKSKLLGSRI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPS-----FQFGMTGAIYIKGV-----------------AVT 90
S R GK WLRL P FGMTG I I+ V +
Sbjct: 61 DSVGRHGKYFWLRLTKEEVPKSRVLLMHFGMTGMIKIRNVKSHLVFMENGGDKKILKELN 120
Query: 91 QYKRSA---VKDTDEWPSKYSKFFVEL---DDGLELSFTDKRRFAKVRLLNDPTS----- 139
+ K+ V+ EWP ++SKF ++L D LE+SF D RR +VRL++D +
Sbjct: 121 EPKKEGDVKVEIDHEWPPRFSKFEMDLAKDDFKLEISFADPRRLGRVRLISDELASTDEG 180
Query: 140 ---VPPISELGPD--------------ALLEP---------MTVDEFTDSLSKKKITIKA 173
+PP+ LGPD +P +++ +F + + KK IK+
Sbjct: 181 LLQLPPLDALGPDYSKSKVVKKDSDDFVFGDPDPCNHGRPRLSLLDFNELILSKKKPIKS 240
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT-------LLKCIKEVIEKA 226
LLLDQ+Y +G+GNWVADEVL+ AK+HP + S + + T L + + V E+A
Sbjct: 241 LLLDQAYFAGVGNWVADEVLFHAKLHPNEIISSKIENNHGTVHPVVQGLYESLIYVCEEA 300
Query: 227 LEVGADSSQFPSNWIFHSR----EKKPGKAFV-DGKKIDFITAGGRTTAYVPELQKLNGV 281
++ DS +FPS+W+ R K GKA +G +D IT GGRT+ Y PE+Q+L
Sbjct: 301 VKCEGDSKKFPSHWLMLHRWGKARKNQGKAKTKEGFVLDHITVGGRTSCYAPEVQRLLKK 360
Query: 282 QAAKAVGKPRKQAPKGED 299
+ A G P K+ K E+
Sbjct: 361 ELV-ANGNPEKRKRKQEN 377
>gi|3850130|emb|CAA21931.1| hypothetical protein [Candida albicans]
Length = 372
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 176/362 (48%), Gaps = 78/362 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADD---NKVIDGVSASDFEASVLGKA-----I 52
MPE+ EV ++ + +G +I K + D V+ + ++ E + + KA +
Sbjct: 1 MPEVAEVSHVCALLKRNILGFRITKVNLLHDPLLFPVLKDTNNAEKELNKMRKALTNAVV 60
Query: 53 LSAHRKGKNLWLRLDSPPFPS---FQFGMTGAIYIKGV--------------AVTQYKRS 95
S R GK W+RL++ + FGMTG + ++ V A+ + +R
Sbjct: 61 TSVGRHGKYFWIRLNNHNTTNVLLMHFGMTGMVKLRNVHSHLAFMENGGDKKALEKLERF 120
Query: 96 AVKDT---------DEWPSKYSKFFVELDDG---LELSFTDKRRFAKVRLLN-------- 135
KD+ EWP +++KF +EL++ LE +F+D RR A+VRLL+
Sbjct: 121 RYKDSRIKPDVEVKQEWPPRFTKFDMELENNDKKLEFAFSDPRRLARVRLLSGLEVSTDE 180
Query: 136 DPTSVPPISELGPD--------------ALLEP---------MTVDEFTDSLSKKKITIK 172
+ P+ LGPD +P +++DEF+ + KK IK
Sbjct: 181 SLLKLSPLDALGPDYSKPEVPPKESEPFVFGDPDSDNHGRARLSIDEFSALILSKKKPIK 240
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE-------VIEK 225
+LLLDQ+Y +G+GNWVADEVL+QA IHP + S + + IK+ V E+
Sbjct: 241 SLLLDQAYFAGVGNWVADEVLFQAHIHPNEIISSKIPKDLEYVHPVIKQLYDSLIYVCEE 300
Query: 226 ALEVGADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
A+ V D ++FP +W+ R +K + +G +D IT GGRT+ Y PELQ+L V+
Sbjct: 301 AVRVEGDVAKFPDDWLMLHRWGKGRKEKRKTPNGYILDHITVGGRTSCYCPELQRLIKVE 360
Query: 283 AA 284
A
Sbjct: 361 TA 362
>gi|363581745|ref|ZP_09314555.1| DNA-formamidopyrimidine glycosylase [Flavobacteriaceae bacterium
HQM9]
Length = 261
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 143/278 (51%), Gaps = 17/278 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV ++ IE C+ +KI+ D + + A FE+++LG+ + R GK
Sbjct: 1 MPELPEVHGYQQYIENTCLHQKIIGFDCRDTRLLKQPLVA--FESNLLGETFIGTQRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+++ FGMTG YK + V+ K+ + ++G
Sbjct: 59 YLFIKTSGFKTLLMHFGMTGK-------PNYYKEAEVR------PKFGHIVLTFENGFHF 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F +KR+F + L++ TS +L DA +T+ EF ++SK+K IK +L+DQS
Sbjct: 106 AFENKRKFGRWDLVDSITSYQKDHKLSKDA--RDLTLQEFITAVSKRKTAIKKVLMDQSV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+G+GNW+AD+VLYQA+IHP + LS E + ++ V+E A+E+ A + FP +
Sbjct: 164 AAGVGNWIADDVLYQAQIHPEKKVTELSNEDLKNIYLKLQYVLETAIELEAHYADFPEQF 223
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ R + F + I GGR T Y P+ QKL
Sbjct: 224 MVKRRREIGASCFYTSGTMKKIIVGGRATYYSPKWQKL 261
>gi|150865500|ref|XP_001384741.2| hypothetical protein PICST_84240 [Scheffersomyces stipitis CBS
6054]
gi|149386756|gb|ABN66712.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 361
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASD-------FEASVLGKAI 52
MPE+ EV + + +G +I ++ +D + + +AS+ + +L I
Sbjct: 1 MPEVAEVAHVCAQLRRNVLGYQIASLVLNNDALLFPVLKNASNPEKELQSLQGRLLHSTI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPS-------FQFGMTGAIYIKG-----------------VA 88
S R GK WLR + P S FGMTG I I+ V
Sbjct: 61 ESVGRHGKYFWLR--TRPVDSKSTDVLLMHFGMTGNIKIRNIGSHLIFLENAGTKEDVVT 118
Query: 89 VTQYKRS---AVKDTDEWPSKYSKFFVELD-DG--LELSFTDKRRFAKVRLLNDP----- 137
V Q + + K+ +EWP +++K + L+ DG L+L+FTD RR ++RLL P
Sbjct: 119 VEQLQNEENESKKEPEEWPPRFTKMELVLEKDGTRLDLAFTDPRRLGRIRLLTGPGIQAD 178
Query: 138 ---TSVPPISELGPDALLEPM-----------------------TVDEFTDSLSKKKITI 171
+ P+ LGPD P TV+EF+ + KK I
Sbjct: 179 EDLLNTSPLDALGPDYSKSPNSLKSEKEFVIGDPDPHHHGRPRPTVEEFSKLVLSKKKPI 238
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKES-------CATLLKCIKEVIE 224
K+ LLDQ++ SGIGNWV DEV+YQA+IHP + S ++ L I + E
Sbjct: 239 KSFLLDQAFFSGIGNWVGDEVVYQARIHPNEVISSKIPQNLEKVHPVVQRLYDSIIYICE 298
Query: 225 KALEVGADSSQFPSNWIFHSR-----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+++ V + +FPSNW+ R +K P DGK +DF+T GGRT+ +VPELQK
Sbjct: 299 ESVRVEGNVKKFPSNWLMLYRWSKAKKKGPKPTTDDGKALDFVTVGGRTSCFVPELQK 356
>gi|338211023|ref|YP_004655074.1| DNA-formamidopyrimidine glycosylase [Runella slithyformis DSM
19594]
gi|336304840|gb|AEI47942.1| DNA-formamidopyrimidine glycosylase [Runella slithyformis DSM
19594]
Length = 271
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 149/287 (51%), Gaps = 26/287 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR E + + I ++I +D K++ A+ E ++G+ +S R GK
Sbjct: 1 MPELPEVETYRRYFEATSLHQPI-EAIEVEDRKLLTTDYATLTEM-LIGQTFVSTKRVGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NL++ D P FGMTG + +Y S++ ++++ G L
Sbjct: 59 NLFIYTDGGPTLHMHFGMTGDL--------EYYHSSLDR-----PRHARIVFVFASGFHL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F R+F ++ L+ + ++ PDAL ++V+E T +L K+K IK +LLDQS
Sbjct: 106 GFICPRKFERIGLIESVDAYLKKKKIAPDAL--DISVEELTYNLRKRKSFIKPVLLDQST 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
++GIGNW+ DEVL+QAKIHP + L+ E + + V+E A+E A+ +FP +
Sbjct: 164 VAGIGNWIVDEVLFQAKIHPETLSNRLTDEEIERIFSATRYVLETAIEHEANYGRFPQQF 223
Query: 241 IFHSRE---------KKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ HSRE + + D +I + GGRTT Y PE Q L
Sbjct: 224 LIHSREWDVSPYEDAGRHKRCPCDKVEIAQMQVGGRTTYYCPECQVL 270
>gi|384497129|gb|EIE87620.1| hypothetical protein RO3G_12331 [Rhizopus delemar RA 99-880]
Length = 560
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 116/194 (59%), Gaps = 10/194 (5%)
Query: 102 EWPSKYSKFFVELDDG-----LELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPM 155
EWP ++ K + +D + F D RR +K+RL++ DP V PIS+LG D +L
Sbjct: 13 EWPPRFWKLLITFEDPATGKIVNFGFKDPRRLSKLRLIDGDPMKVEPISKLGFDPVLNMP 72
Query: 156 TVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+ +EF+ + K+ + K LLLDQS+ +G+GNWVADE+L+QAKIHP Q + +L+KE +L
Sbjct: 73 SFEEFSGLVCKRAVPTKTLLLDQSFSAGVGNWVADEILFQAKIHPAQLSNTLTKEELLSL 132
Query: 216 LKCIKEVIEKALEVGADSSQFPSNWIFHSREKK---PGKAFV-DGKKIDFITAGGRTTAY 271
K V E A+ V AD S+FP +W+ R K PGK + DG+ + F T GGRT+A+
Sbjct: 133 YDKTKYVCETAVAVEADESKFPEDWLMKYRWNKGRGPGKGVLPDGQILKFETIGGRTSAF 192
Query: 272 VPELQKLNGVQAAK 285
P Q L K
Sbjct: 193 SPVRQILRRTNMTK 206
>gi|408674493|ref|YP_006874241.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein
[Emticicia oligotrophica DSM 17448]
gi|387856117|gb|AFK04214.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein
[Emticicia oligotrophica DSM 17448]
Length = 267
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 157/287 (54%), Gaps = 29/287 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASV---LGKAILSAHR 57
MPELPEVE RR EE + + I + +D K++ +D++ + K + R
Sbjct: 1 MPELPEVETYRRYFEETSLFQPIA-DVFVEDTKLL----TTDYDLLIEKLRNKQFIGTKR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GKNL+++LD+P + F FGMTG + + +D ++ P ++++ + +G
Sbjct: 56 IGKNLFIQLDAPYWLHFHFGMTGDL------------AYFRDEEDTP-RFARIVFKFANG 102
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+L F R+F ++ ++ + ++ DAL ++++E +L KK IK++LLD
Sbjct: 103 FKLGFLCPRKFERIGIVENIEEYLLKKKINKDAL--EISIEELAKTLKKKNAPIKSVLLD 160
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
QS ++GIGNW+ D+VL+QAKIHP +++ LS + + + IK VI+ A+++ A+ + FP
Sbjct: 161 QSTVAGIGNWIVDDVLFQAKIHPERSSNQLSNQKIIDIHQAIKLVIQTAIDLQANYNDFP 220
Query: 238 SNWIFHSR------EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N++ H+R + GK G+ I GGRTT + + Q L
Sbjct: 221 KNFLIHARGWGIQQQTLIGKCPACGEPISISKVGGRTTFFCSKRQVL 267
>gi|448533715|ref|XP_003870683.1| Fpg1 Formamidopyrimidine DNA glycosylase [Candida orthopsilosis Co
90-125]
gi|317184406|gb|ADV15626.1| putative formamidopyrimidine DNA glycosylase [Candida
orthopsilosis]
gi|380355038|emb|CCG24554.1| Fpg1 Formamidopyrimidine DNA glycosylase [Candida orthopsilosis]
Length = 394
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 166/356 (46%), Gaps = 78/356 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD--------FEASVLGKAI 52
MPE+ EV ++ + +G KI K ++ D + + S + ++G I
Sbjct: 1 MPEVAEVAHVCALLKRNVLGFKIKKVNLSLDPLLFPVLKESTDPNAELEMMRSKLVGSRI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPS-----FQFGMTGAIYIKGV-----------------AVT 90
S R GK WLRL P FGMTG I I+ V ++
Sbjct: 61 DSVGRHGKYFWLRLTKEGVPKSSVLLMHFGMTGMIKIRNVKSHLVFMENGGDKKILRELS 120
Query: 91 QYKRSAVKDTD---EWPSKYSKFFVEL---DDGLELSFTDKRRFAKVRLLNDPTS----- 139
+ K+ V + EWP ++SKF ++L D LELSF D RR +VRL+ D +
Sbjct: 121 EPKKEGVMKVEPDTEWPPRFSKFEMDLVIDDFKLELSFVDPRRLGRVRLITDRKAETDEG 180
Query: 140 ---VPPISELGPD-------------ALLEP---------MTVDEFTDSLSKKKITIKAL 174
+PP+ LGPD +P + + F + + KK IK+L
Sbjct: 181 LLQLPPLDALGPDYSKSEVETKVSDFVFGDPDPHHHGRPRLDLRGFNELILSKKKAIKSL 240
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT-------LLKCIKEVIEKAL 227
LLDQ+Y +G+GNWV DEVL+ AK+HP + S + + L + + V E+A+
Sbjct: 241 LLDQAYFAGVGNWVGDEVLFHAKLHPNEIISSKIERNSGNINPVIERLYESLIYVCEEAV 300
Query: 228 EVGADSSQFPSNWIFHSR----EKKPGKAFV-DGKKIDFITAGGRTTAYVPELQKL 278
+ DS +FPS+W+ R K GKA +G +D IT GGRT+ + PE+Q+L
Sbjct: 301 KCEGDSKKFPSHWLMLHRWGKARKSQGKAKTKEGFILDHITVGGRTSCFAPEVQRL 356
>gi|68478421|ref|XP_716712.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans
SC5314]
gi|68478540|ref|XP_716652.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans
SC5314]
gi|46438325|gb|EAK97657.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans
SC5314]
gi|46438390|gb|EAK97721.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans
SC5314]
Length = 322
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 155/309 (50%), Gaps = 71/309 (22%)
Query: 47 VLGKAIL-SAHRKGKNLWLRLDSPPFPS---FQFGMTGAIYIKGV--------------A 88
VL A++ S R GK W+RL++ + FGMTG I ++ V A
Sbjct: 4 VLTNAVVTSVGRHGKYFWIRLNNHNTTNVLLMHFGMTGMIKLRNVHSHLAFMENGGDKKA 63
Query: 89 VTQYKRSAVKDT---------DEWPSKYSKFFVELDDG---LELSFTDKRRFAKVRLLN- 135
+ + +R KD+ EWP +++KF +EL++ LE +F+D RR A+VRLL+
Sbjct: 64 LEKLERFRYKDSRIKPDVEVKQEWPPRFTKFNMELENNDKKLEFAFSDPRRLARVRLLSG 123
Query: 136 -------DPTSVPPISELGPD--------------ALLEP---------MTVDEFTDSLS 165
+ P++ LGPD +P +++DEF+ +
Sbjct: 124 LEVSTDESLLKLSPLNALGPDYSKPEVPPKESEPFVFGDPDSDNHGRARLSIDEFSALIL 183
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE---- 221
KK IK+LLLDQ+Y +G+GNWVADEVL+QA IHP + S + + IK+
Sbjct: 184 SKKKPIKSLLLDQTYFAGVGNWVADEVLFQAHIHPNEIISSKIPKDLEYVHPVIKQLYDS 243
Query: 222 ---VIEKALEVGADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPEL 275
V E+A+ V D ++FP +W+ R +K + +G +D IT GGRT+ Y PEL
Sbjct: 244 LIYVCEEAVRVEGDVAKFPDDWLMLHRWGKGRKEKRKTPNGYILDHITVGGRTSCYCPEL 303
Query: 276 QKLNGVQAA 284
Q+L V+ A
Sbjct: 304 QRLIKVETA 312
>gi|344300065|gb|EGW30405.1| hypothetical protein SPAPADRAFT_57196 [Spathaspora passalidarum
NRRL Y-27907]
Length = 384
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 163/353 (46%), Gaps = 76/353 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV---------SASDFEASVLGKA 51
MPE+ EV + + +G +I KS++A ++ +I S F+ ++ G +
Sbjct: 1 MPEVAEVAHVCAQLRRNILGHRI-KSVLASNDPLIFPFLKLSTDPDKELSTFQNALTGCS 59
Query: 52 ILSAHRKGKNLWLRLD----SPPFPSFQFGMTGAIYIKGVAV------------------ 89
+ S R GK W+RL S FGMTG + ++ +
Sbjct: 60 VSSIGRHGKYFWMRLQPRDKSSLVLLMHFGMTGMVKLRNINSHLIFMENGGDKKRLDKLK 119
Query: 90 -TQYKRSAVKDTDEWPSKYSKFFVELDDG---LELSFTDKRRFAKVRLLN--------DP 137
T+ + S + WP K++KF + +DG +E +F D RR A++RLL D
Sbjct: 120 QTEKEPSVADEEVTWPPKFTKFEMTFEDGDNQVEFAFVDPRRLARIRLLTGDSIQNDLDL 179
Query: 138 TSVPPISELGPDA-----LLEP-----------------MTVDEFTDSLSKKKITIKALL 175
+ PP+ LGPD LL+ +T+ EF + KK IK+LL
Sbjct: 180 LNHPPLDVLGPDYSKPRELLKQEQFTMGDPDPDNHGRPRLTLAEFNKLILTKKKPIKSLL 239
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTA------VSLSKESCATLLKCIKEVIEKALEV 229
LDQ+ +G+GNWVADE+L+ A+IHP + V+ L + + V E A++V
Sbjct: 240 LDQNCFAGVGNWVADEILFNARIHPAEVISNKIDNVTTIHPVIERLYENLVYVCETAVKV 299
Query: 230 GADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ FP +W+ R KK DG +D++T GGRT+ Y PELQK+
Sbjct: 300 EGNVDHFPKHWLMLHRWGKSRKKEKPKTNDGYLLDYVTVGGRTSCYSPELQKM 352
>gi|147828418|emb|CAN77708.1| hypothetical protein VITISV_037394 [Vitis vinifera]
Length = 758
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 73/76 (96%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRA+EEHC+GKKI K++IA+D+KVIDGVS SDFEAS+LGK I+SAHRKGK
Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60
Query: 61 NLWLRLDSPPFPSFQF 76
N+WL+LDSPPFPSFQF
Sbjct: 61 NMWLQLDSPPFPSFQF 76
>gi|443242062|ref|YP_007375287.1| DNA glycosylase [Nonlabens dokdonensis DSW-6]
gi|442799461|gb|AGC75266.1| DNA glycosylase [Nonlabens dokdonensis DSW-6]
Length = 260
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 140/278 (50%), Gaps = 18/278 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV + I+ C+ KKI SI D ++ A+DFE ++G+ +++ R GK
Sbjct: 1 MPELPEVHGYKVYIDSTCLHKKIT-SIDCRDKRLFKK-PAADFETFLVGEQLVNTVRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L++ FGMTG R + E K+ + D+
Sbjct: 59 YLFIETSGEKVLVMHFGMTG-------------RPKYYKSKEDRPKFGHIVLTFDNDFHF 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F +KR+F L++D L DA +++D+F +SL +K IK +LLDQS
Sbjct: 106 AFENKRKFGWWDLIDDIQEYKEEHGLSDDA--RELSLDDFKNSLKTRKTHIKKVLLDQSV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+G+GNW+ADE+LYQAK HP ++ ++ + +K+VIE A+E A S FP ++
Sbjct: 164 CAGVGNWMADEILYQAKTHPKIKVENMMEKGIEDVFNAMKKVIEVAIEKDAHYSDFPQDF 223
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ H RE + G F +I I GGR T + P Q L
Sbjct: 224 LMHFRE-EGGICFHTNDEIKKIQLGGRATYFSPNWQVL 260
>gi|408492073|ref|YP_006868442.1| formamidopyrimidine-DNA glycosylase MutM [Psychroflexus torquis
ATCC 700755]
gi|408469348|gb|AFU69692.1| formamidopyrimidine-DNA glycosylase MutM [Psychroflexus torquis
ATCC 700755]
Length = 260
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 18/278 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ + I+ + ++I + + D K++ A DF+A + + ++ R GK
Sbjct: 1 MPELPEVQGYKTYIDSTSLHQRITE-VDCRDTKLLKKPKA-DFDAYLYNQELIETQRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+L+ FGMTG R +E K+ + ++G
Sbjct: 59 YLFLKTTGKKILVMHFGMTG-------------RPHYYKNEEDRPKFGHLELSFENGFHF 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F +KR+F L++ +L DA +T+++F S + +K IK +++DQS
Sbjct: 106 AFENKRKFGWWDLIDSIADFKASHKLSDDA--RDLTLEDFKQSFNGRKTDIKKIIMDQSV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+G+GNW+ADE+LYQ+KIHP + + ++ ++ +K+VIE A+E A FP +
Sbjct: 164 AAGVGNWMADEILYQSKIHPTKKVIEMTDTDIKSVFDAMKKVIEVAIENHAHYKDFPKTF 223
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ H R K+ + G +I+ I GGRTT + P+ Q+L
Sbjct: 224 LMHFR-KEGATCYHTGAQIEKIKVGGRTTYFSPQWQEL 260
>gi|410720764|ref|ZP_11360117.1| formamidopyrimidine-DNA glycosylase [Methanobacterium sp.
Maddingley MBC34]
gi|410600475|gb|EKQ55003.1| formamidopyrimidine-DNA glycosylase [Methanobacterium sp.
Maddingley MBC34]
Length = 261
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 143/278 (51%), Gaps = 20/278 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP VE ++ + + + I + +++ S + + S+ G + R GK
Sbjct: 1 MPELPSVEIFKQYFDRTSLHQPITNVNVVSPEILVE-TSTTQMKESLEGHEFTDSIRYGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+ +LD+ F FGMTG ++ DT E S+Y + ++ DG L
Sbjct: 60 YLFGKLDNDLFLIMHFGMTGYLHY--------------DT-ENSSRYPRLLLKFSDGNFL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F D R+F K+ L +DP LGPDAL + ++F + +K +K LLL+Q+
Sbjct: 105 AFDDARKFGKLGLTHDPDEFIATRRLGPDAL--EVNFEDFQEIFRTRKGMMKPLLLNQNI 162
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
++GIGN ADE+LYQ+++HP+ A L + L K +K+V+ KA+E D P ++
Sbjct: 163 LAGIGNLYADEILYQSRVHPMTHANLLDDQEWEQLFKNMKKVLHKAIEYNDDIKSLPGSY 222
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ R+K G +G +++ I GGRTT P Q++
Sbjct: 223 LLPHRQK--GGKCPEGGEMEIIKVGGRTTFLCPSRQRM 258
>gi|296425340|ref|XP_002842200.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638460|emb|CAZ86391.1| unnamed protein product [Tuber melanosporum]
Length = 394
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 140/283 (49%), Gaps = 9/283 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPEL +V +++H GK + DD V +A F ++V G+ +L A G+
Sbjct: 1 MPELVQVARLAGRLKKHLAGKTLKNVTAMDDPVVFKDTTAKKFISAVEGRTVLDAKSLGR 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL-E 119
LWL +D PP P G+ G ++ K + Y + WP K F +++ E
Sbjct: 61 YLWLEMDKPPHPVMHLGIAGWVFFKSDPYSHYYAREKPEFTNWPPKGEIFHLKIHGSQDE 120
Query: 120 LSFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
F D RR ++RL++ D P+++LGPD L +T++ +K + LL
Sbjct: 121 AMFADPRRLGRLRLMDCSSKDIPKQAPLNDLGPDPLQTEITMEWLRQKFTKHS-PARLLL 179
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
DQ I+G G+W+++E+LYQA+IHP + + + I+ V++ A EV +D S
Sbjct: 180 ADQKNIAGFGSWMSEEILYQARIHPEFQGRKFNDGQFERIRRSIQYVVKTAHEVDSDFSL 239
Query: 236 FPSNWI--FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
FPS+W+ F + G+ +G+ + + T +AYVP Q
Sbjct: 240 FPSHWLKSFRFDWRIKGQTVENGEPVVY-TKHVVKSAYVPSAQ 281
>gi|108804620|ref|YP_644557.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM
9941]
gi|108765863|gb|ABG04745.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM
9941]
Length = 265
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 141/278 (50%), Gaps = 21/278 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE + +E +G++I + + D +V+ VSA ++ G+++ HR GK
Sbjct: 1 MPELPDVEVLKGRLERTSLGRRISR-VEVRDGRVVGEVSARGLREALEGRSLRRVHRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NL+ ++ + FGM G + S + T+E P + + + D G L
Sbjct: 60 NLFAGVEGGGWVLMHFGMAGGL------------SHLPGTEEEPP-HVRLLLGFDGGDRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVD--EFTDSLSKKKITIKALLLDQ 178
+FTD+R +V + DP S LGPDAL VD F + L ++ +K++L++Q
Sbjct: 107 AFTDRRALGRVHPIRDPESFVREKGLGPDAL----RVDYPSFRERLGGRRGAVKSVLMNQ 162
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN +DEVL++A++HP A L +E L + V++ A++ GAD P
Sbjct: 163 GVVAGLGNIYSDEVLFRARLHPRTGADRLGEEDIRRLFEATGGVLQTAIDRGADPEALPG 222
Query: 239 NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+++ R ++ + +I + GRT Y P Q
Sbjct: 223 SFLL-PRRREGARCPRGNGEIRRLRIAGRTAYYCPACQ 259
>gi|402833071|ref|ZP_10881693.1| DNA-formamidopyrimidine glycosylase / dephospho-CoA kinase
multi-domain protein [Selenomonas sp. CM52]
gi|402281438|gb|EJU30073.1| DNA-formamidopyrimidine glycosylase / dephospho-CoA kinase
multi-domain protein [Selenomonas sp. CM52]
Length = 477
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 164/368 (44%), Gaps = 49/368 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E+ G++I + + A + I +F + V G+ IL R+GK
Sbjct: 1 MPELPEVETIRRSLEKVAAGRRITE-VDALLPRTIRFPQVEEFRSRVRGQRILRLERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L+S MTG Y +D D P K+ + +LDDG L
Sbjct: 60 YLMLLLESGETLLLHLRMTGRFY-------------RRDVDTPPGKHVRAIFQLDDGSCL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R F ++ LL + + P + +GP+ L E D++ K IK+ LLDQ
Sbjct: 107 FFEDVRTFGEIHLLQPQEWQAFPAFACMGPEPLTEEFDASYLYDAMQKSGQRIKSFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++G+GN DE L+ A +HPL+ A +L+ + L + I +VI + +E G +
Sbjct: 167 GKVAGLGNIYVDEALFFAGVHPLRRAHTLNHDEAFRLWQAINKVIAEGIEDGGTTFRDYV 226
Query: 234 -----SQFPSNWI-FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ-------KLNG 280
S F + + RE +P V G KI+ I GGR T + P Q KL G
Sbjct: 227 DGEGKSGFHQQKLRVYHREGEP--CLVCGTKIEKIRVGGRGTRFCPHCQPLRDGKLKLIG 284
Query: 281 VQAAKAVGK---PRKQAPKGEDSKDDDKYNS----------GDESESDGEEIAENVKSKK 327
+ A GK R+ G D DK E GEEI S
Sbjct: 285 LTGVIASGKSTVSRQLMKLGAHVIDTDKIAHDLAKPHKPLWDAYREHFGEEILAEDGSLC 344
Query: 328 RQKLGGQV 335
R+K+ +V
Sbjct: 345 REKIAARV 352
>gi|403414603|emb|CCM01303.1| predicted protein [Fibroporia radiculosa]
Length = 2387
Score = 134 bits (338), Expect = 6e-29, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 8/197 (4%)
Query: 6 EVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLR 65
+VE A R I + KI+K +D+ V G S ++F +++ + + + R GK +++
Sbjct: 2159 QVERAVRLIRDVAQDTKIIKVDTNEDSLVFSGTSHTEFADTIVNRTVTTVGRYGKVFYMQ 2218
Query: 66 LD-SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSK--FFVELDDGL---- 118
LD + P FGMTG + +KG T YK + K + +WP ++ K F + L+D +
Sbjct: 2219 LDGAGRVPVLHFGMTGMLQVKGQLATYYKETPRKASTDWPPRFMKTQFILHLNDPVSNSI 2278
Query: 119 -ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
EL+F D RR ++RL P + PPIS LG D +L T+ EF + + K+ IKALLLD
Sbjct: 2279 TELAFLDARRLGRIRLCTSPLTEPPISALGFDPILSMPTLQEFANGVRKRTCPIKALLLD 2338
Query: 178 QSYISGIGNWVADEVLY 194
QS+ +G+GNWVA + ++
Sbjct: 2339 QSFSAGVGNWVAGKSIH 2355
>gi|50555437|ref|XP_505127.1| YALI0F07623p [Yarrowia lipolytica]
gi|49650997|emb|CAG77934.1| YALI0F07623p [Yarrowia lipolytica CLIB122]
Length = 446
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 21/198 (10%)
Query: 103 WPSKYSKFFVELDDGLELSFTDKRRFAKVRLLN-----DPTSVPPISELGPD-------- 149
WP ++ K + L+DG +L+F D RR A+V+L D V P+ +LGPD
Sbjct: 157 WPPRFVKMDLTLEDGTKLAFYDARRLARVKLFTIAEPLDIYKVDPMKKLGPDYSKSPDDE 216
Query: 150 ---ALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVS 206
A L+P+ +D F + KK IK++LLDQS SG+GNWVADE+LY +++HP +
Sbjct: 217 HTPAALKPLDLDAFKAKIQAKKAPIKSVLLDQSLFSGVGNWVADEILYHSRVHPARMCNL 276
Query: 207 LSKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSREKKPGK----AFVDGKKIDFI 262
L + L + + + ++V ++ FP NW+ +R K K ++G ++D +
Sbjct: 277 LLESQIDELYTQLVHICQFVVKVEGNTLLFPLNWLMLNRWGKRNKNKKSYTLEGYEVDHV 336
Query: 263 TAGGRTTAYVPELQKLNG 280
T GGRT+++ PELQ NG
Sbjct: 337 TVGGRTSSFCPELQH-NG 353
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPEL EV A + GKK+ ++ + D V + + + ++ G+ I + R G
Sbjct: 1 MPELGEVAHAASVFAKFATGKKVAEADVQPDKIVFGSETGHEALQKALQGRVITNVSRHG 60
Query: 60 KNLWLRLDSPPFPS--FQFGMTGAIYIKG 86
K WL LD + FGMTG I +KG
Sbjct: 61 KYWWLTLDGDADNAVLLHFGMTGYISVKG 89
>gi|296132484|ref|YP_003639731.1| formamidopyrimidine-DNA glycosylase [Thermincola potens JR]
gi|296031062|gb|ADG81830.1| formamidopyrimidine-DNA glycosylase [Thermincola potens JR]
Length = 275
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 146/290 (50%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R++EE +GK I I D KVI S +F+ + G+ IL+ R+GK
Sbjct: 1 MPELPEVETVKRSLEEKLLGKSIQHVDIFMD-KVIKEPSVEEFQQILAGREILNLGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L F MTG + +R+AV+ +K++ L D EL
Sbjct: 60 YLLLYLSGGYAIVFHLRMTGQLIYS-------ERTAVR------AKHTHLVFHLSDDNEL 106
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD+R+F +V LL D + + +G + L E T + L +K+ IKALLLDQ
Sbjct: 107 RFTDQRQFGRVYLLPDDQLDKITGLRTMGVEPLTEEFTKEFLKKELKRKRTKIKALLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------ 232
++I+GIGN ADE L++AKI+P + A +L++ + L + I EV+ + +E
Sbjct: 167 TFIAGIGNIYADEALFRAKINPERLASTLNQREISRLHRAIVEVLTEGIENRGTSIKDYV 226
Query: 233 -----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S + + +E+KP V G I GGR++ Y QK
Sbjct: 227 DGEGKSGNYQDLLKVYGKEEKPCP--VCGSVILRKKIGGRSSYYCGRCQK 274
>gi|405124053|gb|AFR98815.1| DNA glycosylase [Cryptococcus neoformans var. grubii H99]
Length = 445
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 176/383 (45%), Gaps = 94/383 (24%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE AR+ IE+ C G KIV S+ A ++ +I G ++F + G+ I RK
Sbjct: 1 MPELPEVERARKLIEDSCQGYKIV-SVDAQEDSIIFTGGTDHNEFAKEITGRTITGCERK 59
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK ++ Q G+ G + + + + D +E +G
Sbjct: 60 GKTSKVK--------NQLGI-------GESTKRVRTFGLPDI---------LKLEPQEG- 94
Query: 119 ELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ RR ++RL++DP S P+S LG D +L T++EFT L KK T+K +++D
Sbjct: 95 ----SIGRRLGRLRLVSDPVSSHLPVSGLGFDPILNHPTLEEFTKLLVNKKGTVKGVIMD 150
Query: 178 QSYISGIGN-----------WVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
Q++ +G+GN VLYQA+IHP +LS+++ L ++ V A
Sbjct: 151 QAFSAGVGNTSKSRKSSLIPLTRPRVLYQARIHPSCPIPALSEQNIKDLHHQLRAVPLTA 210
Query: 227 LEVGADSSQFPSNWIFHSR--------------EKKPGKAFVDGK--------------- 257
+ V ADS FPS+W+F R K GK +D +
Sbjct: 211 ISVNADSKLFPSDWLFRWRWSKGTTQKKQMEKDRKSKGKKAIDSEGGEDVKPEDKEFLEL 270
Query: 258 ------KIDFITAGGRTTAYVPELQKL-NGVQ-------AAKAVGKPRKQAPKGEDSKDD 303
I FI GGRTTA V ELQK+ +G++ K G RK+A K E+S +
Sbjct: 271 PDGSPATIKFIEVGGRTTALVEELQKMPDGIEIKPKISKGGKWAGAKRKKAIKEEESDEV 330
Query: 304 DKYNSGDESESDGEEIAENVKSK 326
++ SD E+ EN + +
Sbjct: 331 NEL-------SDQSELEENKRKR 346
>gi|241956478|ref|XP_002420959.1| formamidopyrimidine-DNA glycosylase, putative [Candida dubliniensis
CD36]
gi|223644302|emb|CAX41115.1| formamidopyrimidine-DNA glycosylase, putative [Candida dubliniensis
CD36]
Length = 348
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 139/298 (46%), Gaps = 70/298 (23%)
Query: 51 AILSAHRKGKNLWLRL---DSPPFPSFQFGMTGAIYIKGV--------------AVTQYK 93
+ S R GK W+RL ++ FGMTG + ++ V + +
Sbjct: 31 VVTSVGRHGKYFWIRLHNHNTCNVLLMHFGMTGMVKLRNVQSHLSFMENGGDKKVLEMLE 90
Query: 94 RSAVKDT---------DEWPSKYSKFFVELDDG---LELSFTDKRRFAKVRLLN------ 135
R KD+ EWP +++KF +EL++ LE +F+D RR A+VR L+
Sbjct: 91 RFKYKDSKIEPDAEVKQEWPPRFTKFDMELENNEKKLEFAFSDPRRLARVRSLSGLEVSA 150
Query: 136 --DPTSVPPISELGPD--------------ALLEP---------MTVDEFTDSLSKKKIT 170
+ P++ LGPD +P + +DEF+ + KK
Sbjct: 151 DESLLKLSPLNVLGPDYSKPDVPPKELEKFVFGDPDSDNHGRPRLPIDEFSSLVLSKKKP 210
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHP-------LQTAVSLSKESCATLLKCIKEVI 223
IK+LLLDQ+Y +G+GNWVADEVL+QA IHP + + L + V
Sbjct: 211 IKSLLLDQAYFAGVGNWVADEVLFQAHIHPNEIISSKIPNDLDYIHPVLQKLYDSLIYVC 270
Query: 224 EKALEVGADSSQFPSNWIFHSRE---KKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
E+A+ V D ++FP +W+ R +K + +G +D IT GGRT+ Y P LQKL
Sbjct: 271 EEAVRVEGDVTKFPDDWLMLHRWGKGRKEKRKTPNGLILDHITVGGRTSCYCPALQKL 328
>gi|332664166|ref|YP_004446954.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter
hydrossis DSM 1100]
gi|332332980|gb|AEE50081.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter
hydrossis DSM 1100]
Length = 258
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 141/277 (50%), Gaps = 23/277 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV +R +E + ++I + + DD K+I + + F + G+ ++R+GK
Sbjct: 1 MPELPEVNTFQRYFDESALQQRIARVDVHDD-KIIRNMDGASFAERLHGRTFTGSYRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+ +LD+ FGMTG I +D + P K+ +F D+G +L
Sbjct: 60 YLFAQLDNGHHVLLHFGMTGDI------------KYYEDPIDKP-KHERFAFVFDNGFQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+FA++ L D + LG DAL ++ +F +S KK +KA LL Q
Sbjct: 107 GFDDPRKFARILYLEDLQAYIDSLPLGEDAL--RISEADFLQLISNKKGQLKAFLLQQQN 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
++G+GN ADE+ YQ +IHP SLS E L +++++ A+E A +P +W
Sbjct: 165 LAGVGNLYADELCYQTRIHPAARIESLSLEDKKLLFTTLQKILNYAVERRAYYKDYPEDW 224
Query: 241 IFHSREKKPGKAFV--DGKKIDFI-TAGGRTTAYVPE 274
++ R + FV DGK + T GRTT ++ E
Sbjct: 225 LWQWRV----EGFVPPDGKGVVRKGTIAGRTTYFLSE 257
>gi|406696355|gb|EKC99646.1| hypothetical protein A1Q2_06065 [Trichosporon asahii var. asahii
CBS 8904]
Length = 376
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 148/320 (46%), Gaps = 60/320 (18%)
Query: 5 PEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDF-----EASVLGKAILSAHRKG 59
PEVE ARR I E C G I K+ +D V DG S +F E+S L A+ K
Sbjct: 19 PEVERARRLIAETCTGYTIGKAETYEDTIVYDGASHDEFDVNARESSSSHTFNLEANFKI 78
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-----SAVKDTDEWPSKYSKFFVEL 114
+ R P + + G T Y+R V WP K + V
Sbjct: 79 LDYSFRRRQIP----SYALRHDRNDPGQEPTWYRRKVNLGEGVDGALLWPPKLTPPDVA- 133
Query: 115 DDGLELSFTDKRRFAKVRLLNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+ EL+F D RR ++RL+ DP S PP+S LG D +L ++DEF L K+ T+K
Sbjct: 134 GEARELAFLDPRRLGRLRLVPDPVLSHPPLSLLGFDPVLSHPSLDEFKGLLENKRGTVKG 193
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
L++DQ++ +G+GNWVADE HP+Q L + L + +++V KA EV ADS
Sbjct: 194 LIMDQAFSAGVGNWVADEC------HPIQ---DLEEAQVVELHRLLRDVPMKACEVNADS 244
Query: 234 SQFPSNWIFHSR---------------------EKKPGKAFV------------DGK--K 258
+ FP+NW+F R E+ A V DG
Sbjct: 245 ALFPTNWLFKWRWGKGAKKKKKAVSSTNGDVKVEQPAFLALVGNIVTIVTDVEPDGSPAT 304
Query: 259 IDFITAGGRTTAYVPELQKL 278
I F+T GGRT+A V ELQK+
Sbjct: 305 ITFVTVGGRTSAVVTELQKM 324
>gi|260887311|ref|ZP_05898574.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC
35185]
gi|330838935|ref|YP_004413515.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC
35185]
gi|260862947|gb|EEX77447.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC
35185]
gi|329746699|gb|AEC00056.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC
35185]
Length = 477
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 160/368 (43%), Gaps = 49/368 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E+ G++I + + + I F + V G+ IL R+GK
Sbjct: 1 MPELPEVETIRRSLEKVAAGRRITEVDVLLP-RTIRFPEVEAFRSRVRGQRILCLERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L+S MTG Y +D D ++ + LDDG L
Sbjct: 60 YLMLPLESGETLLLHLRMTGRFY-------------RRDADTPTGRHVRAIFHLDDGSCL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R F ++ LL + + P S +GP+ L E D++ K IK+ LLDQ
Sbjct: 107 FFEDVRTFGEIHLLQPQERKAFPAFSCMGPEPLTEEFDASYLYDAMQKSSQRIKSFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++G+GN DE L+ A +HPL+ A +L+ + L + I +VI + +E G +
Sbjct: 167 GKVAGLGNIYVDEALFFAGVHPLRRAHTLNHDEAFRLWQAINKVIAEGIEDGGTTFRDYV 226
Query: 234 -----SQFPSNWI-FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ-------KLNG 280
S F + + RE +P V G KI+ I GGR T + P Q +L G
Sbjct: 227 DGEGKSGFHQQKLRVYHREGEP--CLVCGTKIEKIRVGGRGTHFCPHCQPLRDGKLRLIG 284
Query: 281 VQAAKAVGK---PRKQAPKGEDSKDDDKYNSG----------DESESDGEEIAENVKSKK 327
+ A GK R+ G D DK E GEEI S
Sbjct: 285 LTGVIASGKSTVSRQLMKLGAHVIDTDKIAHNLAKPHKPLWDAYREHFGEEILAEDGSLC 344
Query: 328 RQKLGGQV 335
R+K+ +V
Sbjct: 345 REKIAARV 352
>gi|220931332|ref|YP_002508240.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168]
gi|219992642|gb|ACL69245.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168]
Length = 274
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 25/288 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++E G KI K II + K++ F V G ++ R+GK
Sbjct: 1 MPELPEVETVVRGLKELIKGVKINKVIIRE-TKLLVYPDPDTFIDLVEGSRVIDVLRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ ++LD+ F F MTG + + Y+R+ D K++ F EL+DG +L
Sbjct: 60 YILIKLDNNRFLVFHLKMTGQLVV-------YERNNKYD------KHTHFVFELEDGRDL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F + R+F +V L+ + +++LGP+ L + TVDEF D + ++K IK LLL+Q
Sbjct: 107 RFNNMRKFGRVYLVTKGEFDKAGSLADLGPEPLSDEFTVDEFADIIKRRKGNIKGLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+I+G+GN ADE L++A I P + A SL L I++V++ ++ G S +
Sbjct: 167 KFIAGLGNIYADEALFEAGISPERKADSLDDSEIERLYHAIRKVLKMGIKYGGTSMKDYV 226
Query: 239 NWI-----FHSREK---KPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
N F ++ K K G+ V+ G +I GR++ Y P QK
Sbjct: 227 NARGRIGEFQNKLKVYRKTGEECVNCGHEIQKKVIRGRSSHYCPGCQK 274
>gi|344234024|gb|EGV65894.1| hypothetical protein CANTEDRAFT_133319 [Candida tenuis ATCC 10573]
Length = 368
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 156/366 (42%), Gaps = 89/366 (24%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD--------FEASVLGKAI 52
MPE+ EV + + IG +I + I +D+ + + ++ + + G +
Sbjct: 1 MPEVAEVAHVCAQLRRNIIGYRITGANILNDSLLFPSLKGNNEPEGEIRRINSLLDGAVV 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGV------------------------- 87
R GK W+R ++ FGMTG I +K +
Sbjct: 61 EKVGRHGKYFWIRFNNQVAMLMHFGMTGMIKLKNIDSHMVFMENGGDKKILETKVKVKEE 120
Query: 88 --------AVTQY--KRSAVKDTDE-----------WPSKYSKFFVELDDGL--ELSFTD 124
++Y K+ ++K+ D WP +SK ++L +LSF D
Sbjct: 121 STSGSSSKTTSKYFAKKESIKEVDNKKQEQEQEQEQWPPNFSKMELKLKKEKELDLSFVD 180
Query: 125 KRRFAKVRLLNDPT------SVPPISELGPDA--------------------LLEPMTVD 158
RR ++R D T ++ P+ GPD +E +++
Sbjct: 181 PRRLGRIRFFTDITKDEDLFNLDPLKRQGPDYSKSGLHVTKIFEYGDPDPKRYIELLSLP 240
Query: 159 EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHP---LQTAVSLSKESCATL 215
EF + KK TIK+LLL+Q Y +G+GNWV+DE+LYQ++IHP L + S L
Sbjct: 241 EFAKLVISKKKTIKSLLLEQDYFAGVGNWVSDEILYQSRIHPGEVLSEKLDSSSPVIEAL 300
Query: 216 LKCIKEVIEKALEVGADSSQFPSNWI----FHSREKKPGKAFVDGKKIDFITAGGRTTAY 271
+ V A+ V D +FP W+ + R K KA V G +DF+T GGRT +
Sbjct: 301 YNALISVCYTAVSVEGDVKKFPEEWLMLYRWGKRRTKQAKAKVGGHPVDFVTIGGRTACF 360
Query: 272 VPELQK 277
VP++QK
Sbjct: 361 VPKVQK 366
>gi|284040426|ref|YP_003390356.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74]
gi|283819719|gb|ADB41557.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74]
Length = 271
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 146/286 (51%), Gaps = 27/286 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E + + V I +D K++ A+ + +++G+ R GK
Sbjct: 1 MPELPEVEIRRQYLETSSLYQP-VSHIEVEDKKLLTTDLAT-LQQALIGRQFTGTRRVGK 58
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
NL++ D+P FGMTG + +Y +++ ++++ E G
Sbjct: 59 NLFIFTDAPDVIIHMHFGMTGDL--------EYYHASLDR-----PRFARIVFEFTSGFN 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F R+F +V L+ D + ++G D L ++++ +D + +KK IK +LLDQS
Sbjct: 106 LGFLCPRKFERVGLVTDVDAFLLRKKIGEDGL--DISLETLSDRVRRKKAFIKPVLLDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
++G+GNW+ DEVL+QA IHP Q A +L+ + A+L I+ V+E A+ A FP
Sbjct: 164 VVAGLGNWIVDEVLFQALIHPEQRADTLTNDQMASLHIAIRLVLETAIRYEATYRDFPIG 223
Query: 240 WIFHSRE--KKPGKAFVDGK-------KIDFITAGGRTTAYVPELQ 276
++ H RE P K +I+ GGRTT + P+ Q
Sbjct: 224 FLIHVREWDDSPYDDVEAHKYCPRCKTRIERSVVGGRTTFFCPKEQ 269
>gi|392968793|ref|ZP_10334209.1| DNA-formamidopyrimidine glycosylase [Fibrisoma limi BUZ 3]
gi|387843155|emb|CCH56263.1| DNA-formamidopyrimidine glycosylase [Fibrisoma limi BUZ 3]
Length = 275
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 147/291 (50%), Gaps = 33/291 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASV---LGKAILSAHR 57
MPELPEVE R+ +E + + I + + +D K++ +D++ + +G+ + R
Sbjct: 1 MPELPEVEIRRQYLETSSLHQTI-EHVEVEDKKLL----TTDYQTLIEKLIGRQFVGTRR 55
Query: 58 KGKNLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
GKNL++ D P FGMTG + +Y ++V ++++ +
Sbjct: 56 VGKNLFVVTDVPNVIVHMHFGMTGDL--------EYYHASVDR-----PRFARIVFAFSN 102
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
G L F R+F ++ L++D + ++G D L ++V++F +++ +KK IK +LL
Sbjct: 103 GFNLGFLCPRKFERIGLVDDINAYLERKKIGDDGL--AISVEQFAEAVRRKKSLIKPVLL 160
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF 236
DQS ++G+GNW+ DEVL+QA +HP Q A +L+ L I+ V++ A+ A F
Sbjct: 161 DQSTVAGLGNWIVDEVLFQAYVHPEQRANTLTDAQIHQLHSSIQLVLQTAIRYEATYRDF 220
Query: 237 PSNWIFHSRE-------KKPGKAFVD--GKKIDFITAGGRTTAYVPELQKL 278
P +++ H RE F +I+ GGRTT Y P Q +
Sbjct: 221 PVDFLIHVREWDDSPYDDVEAHKFCPRCRTRIERKDVGGRTTFYCPNEQVI 271
>gi|146423146|ref|XP_001487505.1| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC
6260]
Length = 386
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 141/321 (43%), Gaps = 89/321 (27%)
Query: 46 SVLGKAILSAHRKGKNLWLRLDSPPFPSF----------QFGMTGAIYIKGV-------- 87
++LG I S R GK W+RL+ P FGMTG I ++ +
Sbjct: 4 TLLGSRIDSVGRHGKYFWMRLNLANGPDLAKAPSGVLLMHFGMTGMIKLRNIDSHLTFME 63
Query: 88 -----AVTQYKRSAVKD--------------------TDEWPSKYSKFFVELD----DGL 118
V + + AVK +EWP K+ KF ++L+ + +
Sbjct: 64 NGGDKKVLEKMKVAVKQETTETVTVPKDDKDTKDDVKDEEWPPKFVKFEMDLERENGEVI 123
Query: 119 ELSFTDKRRFAKVRLLNDPT--------SVPPISELGPDA--LLEPMTVD---------- 158
EL+F D RR +VRLL T P+ LGPD L E T D
Sbjct: 124 ELAFVDPRRLGRVRLLTGETVQSDELLMEEAPLKSLGPDYSKLAEGKTTDKFVYGDPDPH 183
Query: 159 ----------EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
EF D + KK IK++LL+Q SG+GNWVADE++Y A++HP +S
Sbjct: 184 HHGRPRLLLQEFNDLVLLKKKPIKSMLLEQELFSGVGNWVADEIIYHARLHP-NEVISSK 242
Query: 209 KESCATLLKCIKE-------VIEKALEVGADSSQFPSNWIFHSR----EKKPGKAFVDGK 257
+ + + IKE V E + V + +QFP NW+ R K+ +G
Sbjct: 243 ISNDGNVSQVIKELYNALIYVCEYCVSVEGEVTQFPDNWLMPYRWGKGRKQEKSKTKEGY 302
Query: 258 KIDFITAGGRTTAYVPELQKL 278
++D T GGRT+ +VPELQK+
Sbjct: 303 QVDHGTVGGRTSCFVPELQKM 323
>gi|408382465|ref|ZP_11180009.1| DNA-formamidopyrimidine glycosylase [Methanobacterium formicicum
DSM 3637]
gi|407814820|gb|EKF85443.1| DNA-formamidopyrimidine glycosylase [Methanobacterium formicicum
DSM 3637]
Length = 238
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 127/241 (52%), Gaps = 19/241 (7%)
Query: 39 SASDFEASVLGKAILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK 98
S++ + ++ G + R GK L+ +LDS F FGMTG ++ +
Sbjct: 13 SSNQMKKAMEGHEFTESTRYGKYLFAKLDSDLFLIMHFGMTGYLHYE------------- 59
Query: 99 DTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVD 158
+ S+Y + ++ G L+F D R+F K+ L DP +LGPDAL ++
Sbjct: 60 --HQNTSRYPRLLIKFSGGNFLAFDDARKFGKLGLTLDPDEFIENKKLGPDAL--EVSFK 115
Query: 159 EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC 218
+F D + +K IK LLL+Q+ ++GIGN ADE+LYQ+++HPL A + K+ + +
Sbjct: 116 DFYDIVHGRKGMIKPLLLNQNILAGIGNLYADEILYQSRVHPLTRANLIDKQGWGQIFQN 175
Query: 219 IKEVIEKALEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+K+V++KA+E P +++ R K G +G+K++ I GGRTT P Q +
Sbjct: 176 MKKVLQKAIECDDSVKSLPESYLLPHRHK--GGKCPEGEKLETIKVGGRTTFLCPHRQMI 233
Query: 279 N 279
N
Sbjct: 234 N 234
>gi|190344984|gb|EDK36784.2| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC
6260]
Length = 386
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 142/321 (44%), Gaps = 89/321 (27%)
Query: 46 SVLGKAILSAHRKGKNLWLRLDSPPFPSF----------QFGMTGAIYIKGV-------- 87
++LG I S R GK W+RL+ P FGMTG I ++ +
Sbjct: 4 TLLGSRIDSVGRHGKYFWMRLNLANGPDLAKAPSGVLLMHFGMTGMIKLRNIDSHLTFME 63
Query: 88 -----AVTQYKRSAVKD--------------------TDEWPSKYSKFFVELD----DGL 118
V + + AVK +EWP K+ KF ++L+ + +
Sbjct: 64 NGGDKKVLEKMKVAVKQETTETVTVPKDDKDTKDDVKDEEWPPKFVKFEMDLERENGEVI 123
Query: 119 ELSFTDKRRFAKVRLLNDPT--------SVPPISELGPD-------------ALLEP--- 154
EL+F D RR +VRLL T P+ LGPD +P
Sbjct: 124 ELAFVDPRRLGRVRLLTGETVQSDELLMEEAPLKSLGPDYSKSAEGKTTDKFVYGDPDPH 183
Query: 155 ------MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLS 208
+++ EF D + KK IK++LL+Q SG+GNWVADE++Y A++HP +S
Sbjct: 184 HHGRPRLSLQEFNDLVLLKKKPIKSMLLEQELFSGVGNWVADEIIYHARLHP-NEVISSK 242
Query: 209 KESCATLLKCIKE-------VIEKALEVGADSSQFPSNWIFHSR----EKKPGKAFVDGK 257
+ + + IKE V E + V + +QFP NW+ R K+ +G
Sbjct: 243 ISNDGNVSQVIKELYNALIYVCEYCVSVEGEVTQFPDNWLMPYRWGKGRKQEKSKTKEGY 302
Query: 258 KIDFITAGGRTTAYVPELQKL 278
++D T GGRT+ +VPELQK+
Sbjct: 303 QVDHGTVGGRTSCFVPELQKM 323
>gi|410668136|ref|YP_006920507.1| formamidopyrimidine-DNA glycosylase MutM [Thermacetogenium phaeum
DSM 12270]
gi|409105883|gb|AFV12008.1| formamidopyrimidine-DNA glycosylase MutM [Thermacetogenium phaeum
DSM 12270]
Length = 274
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 135/290 (46%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++E + +I + + K + F A + G+ I R+GK
Sbjct: 1 MPELPEVETIVRSLEGKIVNHRI-RRVEVLSEKAVKTPEIGLFVARLEGQRITGVGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L +R+ S MTG R + D +Y+ +LD+G E+
Sbjct: 60 HLLIRIGSSWVLVIHLRMTG-------------RLIYTEADSPSDRYTHVIFQLDNGGEI 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF + LL + + P + LGPDAL +T D F L ++ IK LLLDQ
Sbjct: 107 RFHDVRRFGTIHLLTNEEAERFPSLCSLGPDALDPELTRDVFKRRLKGRRGQIKNLLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
S+ISGIGN A+E+L++A++HP ++ SLS + + ++EV+ A+ +
Sbjct: 167 SFISGIGNIYANEILWKARVHPERSVDSLSSREQGMIYRAMREVLGLAVAHRGTTLRDYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+F H RE P + K I GGR+ + P QK
Sbjct: 227 DGEGVPGEFQGLLAVHGREGAPCPSC--KKPIVRAKIGGRSAFFCPFCQK 274
>gi|347525545|ref|YP_004832293.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis ATCC
27782]
gi|345284504|gb|AEN78357.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis ATCC
27782]
Length = 276
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 138/289 (47%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + +K+I G S +F + GK +L R+GK
Sbjct: 1 MPELPEVETVRRGLNRLIKGKTI-KDVNVLYDKIIVG-SKDEFCKKLSGKKLLDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S + M + ++G + V+ E K++ L DG EL
Sbjct: 59 YLLFRF------SGELTMVSHLRMEG-------KYFVRRKGEPVEKHTHVIFYLMDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L + T++ IS+LGP+ + +F + L KKK IK LLDQ
Sbjct: 106 HYNDVRKFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN ADEVLY AKIHPL LS++ L I + +EKA+E G + + +
Sbjct: 166 TLVAGVGNIYADEVLYMAKIHPLTPCNELSRKQADCLRNSIIDELEKAIEKGGTTIRSYA 225
Query: 239 N---------WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + K K G I+ I G R T Y P Q +
Sbjct: 226 NAFLEEGSFQFFLQVYGKTGEKCGRCGTPIEKIVVGQRGTHYCPNCQVM 274
>gi|448089904|ref|XP_004196933.1| Piso0_004163 [Millerozyma farinosa CBS 7064]
gi|448094263|ref|XP_004197964.1| Piso0_004163 [Millerozyma farinosa CBS 7064]
gi|359378355|emb|CCE84614.1| Piso0_004163 [Millerozyma farinosa CBS 7064]
gi|359379386|emb|CCE83583.1| Piso0_004163 [Millerozyma farinosa CBS 7064]
Length = 414
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 170/412 (41%), Gaps = 114/412 (27%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN---KVIDGVSASDFEASVL-----GKAI 52
MPE+ EV + + +G ++ K + +D V+ G D E L K I
Sbjct: 1 MPEVSEVSHVCALLRRNVLGCQLSKVNLKNDPLLFPVLKGSKDPDEELFRLRSKLENKVI 60
Query: 53 LSAHRKGKNLWLRL-DSPPFPS----FQFGMTGAIYIK------------GVAVTQ---- 91
S R GK WLRL D+ S FGMTG I ++ G +V
Sbjct: 61 KSVGRHGKYFWLRLRDNESSESTVLLMHFGMTGMIKLRNVKSHLIFMENGGDSVILKELK 120
Query: 92 --------------------YKRSAVKDTDE--------------WPSKYSKFFVELDDG 117
KR A D WP ++SKF +EL G
Sbjct: 121 EEKIKKEVGNQDDKPPSGDGVKREAQSTVDSQVKEEEITPEKEEEWPPRFSKFELELTRG 180
Query: 118 ---LELSFTDKRRFAKVRLLNDP--------TSVPPISELGPDALLEPMTV---DEFT-- 161
++ SFTD RR +VRLL P P+ +LGPD P V D+FT
Sbjct: 181 TDKIDFSFTDPRRLGRVRLLEGPEIQTDKQLMDQDPLVQLGPDYSKSPTPVETKDQFTSG 240
Query: 162 --------------DSLSK----KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQT 203
+ SK K+ IK+LLLDQ + +G+GNW+ DE+LY AKI+P +
Sbjct: 241 DPDPSPHGRPRLDLEQFSKLVLSKRTPIKSLLLDQRFFAGVGNWMGDEILYHAKIYPNEV 300
Query: 204 -AVSLSKES--------CATLLKCIKEVIEKALEVGADSSQFPSNWIFHSREKK-----P 249
+ ES A L + V E ++ V D +FP+NW+ R K P
Sbjct: 301 LGAKIEPESSTGGVHPKIADLYNALIYVCEYSVLVEGDVRRFPANWLMMYRWGKRRKSAP 360
Query: 250 GKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDSK 301
+G ++D IT GGRT YVP++Q+ AA A + +P+G SK
Sbjct: 361 KLKTAEGYQVDHITVGGRTACYVPDIQR---PIAAHARAEFSNTSPEGTPSK 409
>gi|374996093|ref|YP_004971592.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus orientis
DSM 765]
gi|357214459|gb|AET69077.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus orientis
DSM 765]
Length = 273
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + H G ++ + K + G FE V G+ I + R+GK
Sbjct: 1 MPELPEVETIRRTLAGHVAGL-VINEVELIWPKAVSGWEGQPFEVLVAGRKIKTIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL+ MTG R + P K++ LD G E+
Sbjct: 60 YLLIRLEEDITLIAHMRMTG-------------RLNYYSEKKEPEKHTHVVFRLDQG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F+D R+F +++ + P V + +LGP+ L + T + + LS+KK+ +KA LLDQ
Sbjct: 106 HFSDVRKFGRIQAIPTPLCVSGSALCKLGPEPLEQEFTPEVLKERLSRKKLPVKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN ADE L++A I PL+ +LS+E A L + I+EV++ ++ S +
Sbjct: 166 HVLAGLGNIYADEALFRAGISPLRRVDTLSEEELAKLHQAIREVLQAGIDAQGTSFRDYR 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R +P K + G+ ++ + GRTT Y + QK
Sbjct: 226 DANGEKGSFEQALQVYGRGGEPCK--ICGQTLEQVRLAGRTTVYCSKCQK 273
>gi|269836816|ref|YP_003319044.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM
20745]
gi|269786079|gb|ACZ38222.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM
20745]
Length = 278
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 129/290 (44%), Gaps = 27/290 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ G I + I F A V G+ I R+GK
Sbjct: 1 MPELPEVENVRRSLTAAVDGTTIAAVRLGAFTGCIAAPEPDAFVARVTGRRITDFGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LDS + MTG + V D K+ LDDG EL
Sbjct: 61 YLLIALDSGDTIAVHLRMTGEL-------------TVTSPDTPTGKHHHLTFVLDDGREL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F+D R+F ++ LL + LGP+ L + T + F L+ + +K LLLDQ++
Sbjct: 108 RFSDTRKFGRLTLLTPDEAAALDRSLGPEPLDDRFTAERFAAMLAARSRAVKPLLLDQTF 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA-------DS 233
++G+GN ADE L+ A+IHPL+ A SL+ + A LL I+ + A+E G D
Sbjct: 168 LAGVGNIYADEALFAARIHPLRPANSLTLDEAARLLDSIRVTLAAAIERGGTTLRDYRDG 227
Query: 234 SQFPSN-----WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
P N I+H E P G+ I + R T + P Q L
Sbjct: 228 LGRPGNNQHYLNIYHRAEGDPCPRC--GEPIARLVVVQRGTRFCPRCQPL 275
>gi|149236155|ref|XP_001523955.1| hypothetical protein LELG_04768 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452331|gb|EDK46587.1| hypothetical protein LELG_04768 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 508
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 162/402 (40%), Gaps = 119/402 (29%)
Query: 28 IADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLRLDSPPFPSFQ-----FGMTGAI 82
IADD ++ +AS ++ +L I+S R GK W+RL P Q GMTG I
Sbjct: 28 IADDPEI----TASSIKSKLLNSIIVSVGRHGKYFWMRLKQPKMEHTQVLLMHLGMTGRI 83
Query: 83 YI----------------------------KGVAVTQYKRSAVK---------------- 98
+ K V + + A++
Sbjct: 84 KLCNVESELVFMENGGDKKLLEEELAKEKDKNVVTSSRVKMAMEVGQKQGVQRGNTEVKI 143
Query: 99 ----DTDEWPSKYSKFFVEL----DDGLE--LSFTDKRRFAKVRLLNDP--------TSV 140
+T WP K++K + L D G E +F D RR ++RLL
Sbjct: 144 ELEGETSSWPPKFTKLEMTLRQDSDHGNEEFWAFVDPRRLGRIRLLEGEEIQTDEGLLKT 203
Query: 141 PPISELGPD-------ALLEPMT-------------------VDEFTDSLSKKKITIKAL 174
PP+ GPD L +P + ++EF+ + K K TIK++
Sbjct: 204 PPLDLQGPDYSKPPTRCLSDPSSAVFVSGDPDPDHHGRPRPSLEEFSQVVLKSKKTIKSM 263
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHP---LQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
LLDQ+ +G+GNWVADEVL+ AK+HP L + L TL K + V E ++ +
Sbjct: 264 LLDQARFAGVGNWVADEVLFHAKLHPEEVLPLKIKLDSPVLYTLYKSLIHVCETSVALEG 323
Query: 232 DSSQFPSNWIFHSREKKPGK-----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
+ +FP NW+ R K K +G +D IT GGRT+ Y P +QKL
Sbjct: 324 SARRFPENWLMRHRWGKGRKRDGPHQTAEGILLDHITVGGRTSCYAPSVQKL-------- 375
Query: 287 VGKPRKQAPKGEDSKDDDKYNSGDESESDGEEIAENVKSKKR 328
P+ +K +K G ++ DG I K K+R
Sbjct: 376 ------LKPEPGVNKVQEKPQKGTKTNGDGVSITRTNKVKRR 411
>gi|145296036|ref|YP_001138857.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum R]
gi|417970864|ref|ZP_12611793.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Corynebacterium glutamicum S9114]
gi|166215621|sp|A4QFD9.1|FPG_CORGB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|140845956|dbj|BAF54955.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044744|gb|EGV40419.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Corynebacterium glutamicum S9114]
Length = 286
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 124/243 (51%), Gaps = 23/243 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E+H +G IV + + + + + EA++ G + +A R+G
Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60
Query: 60 KNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K LWL L D+P + GM+G + IK + D S + +
Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHLRAK 107
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKIT 170
+ELD+G E+ F D+R F L + VP +S + D L E +L +K
Sbjct: 108 IELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSRKSE 167
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V+ KAL G
Sbjct: 168 IKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKALAQG 227
Query: 231 ADS 233
S
Sbjct: 228 GTS 230
>gi|19553271|ref|NP_601273.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum
ATCC 13032]
gi|161486717|ref|YP_226310.2| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum
ATCC 13032]
gi|24211704|sp|Q8NNV7.3|FPG_CORGL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|21324843|dbj|BAB99466.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum
ATCC 13032]
gi|385144174|emb|CCH25213.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum
K051]
Length = 286
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 127/246 (51%), Gaps = 29/246 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE RR +E+H +G IV + + A N++ G + EA++ G + +A
Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAK 57
Query: 57 RKGKNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
R+GK LWL L D+P + GM+G + IK + D S +
Sbjct: 58 RRGKFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHL 104
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKK 167
+ VELD+G E+ F D+R F L + VP +S + D L E +L +
Sbjct: 105 RAKVELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSR 164
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
K IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V+ KAL
Sbjct: 165 KSEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKAL 224
Query: 228 EVGADS 233
G S
Sbjct: 225 AQGGTS 230
>gi|331695858|ref|YP_004332097.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans
CB1190]
gi|326950547|gb|AEA24244.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans
CB1190]
Length = 268
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ARR +E H + ++IV ++ D V + + ++G + +AHR+GK
Sbjct: 1 MPELPEVESARRVLE-HALDRRIV-AVDDTDEWVCRPHPPGEIASVLVGGTLTAAHRRGK 58
Query: 61 NLWLRL-----DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
+W D P GM G + + + D + ++++F V D
Sbjct: 59 AMWCETRDEHGDDGPHLGLHLGMGGHLVVTDADDVRAGGDPRPDGSQGRPEWNRFTVTFD 118
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
DG EL DKRR +VRL P I LGPDA E +T + L + +KA L
Sbjct: 119 DGGELRLFDKRRLGRVRL------DPDIDALGPDA--EEITAAGLRERLRRSHAPVKARL 170
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ ++GIGN +ADE L+QA+I P + A L + L + ++ + A+E G +
Sbjct: 171 LDQKVVAGIGNLLADETLWQARIAPSRPADELDRTEVNRLHRNLERALRSAIEKGGVHT- 229
Query: 236 FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYV 272
I H R G G + T GGR+T +
Sbjct: 230 --GRVIAHRRAD--GACPRCGAPMVHGTVGGRSTWWC 262
>gi|304407961|ref|ZP_07389611.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus
YK9]
gi|304342980|gb|EFM08824.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus
YK9]
Length = 299
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 142/315 (45%), Gaps = 33/315 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK IV+ ++ + F A++ G I S R+GK
Sbjct: 1 MPELPEVETVRRTLNELVAGKTIVRVTVSLPRIIRRPAEPEQFAAALAGHTITSVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD + + ++G R V DE ++ DG EL
Sbjct: 61 FLRLVLDG-------LVLVSHLRMEG-------RYGVYRQDELVETHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + +PP+++LG + L + T + LS + IK LLLDQ
Sbjct: 107 RYKDVRQFGTMDLFAPEEDLLLPPLNKLGMEPLDDDFTEKALRERLSSRTTKIKPLLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+Y+ G+GN DE L+QA IHP +TA +L + L + I++ + +A+ G S
Sbjct: 167 AYVVGLGNIYVDEALFQAGIHPERTADTLKRAEWTRLYEAIRDTLGRAVAAGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ-KLNGVQAAKA 286
F + + R +P + G I+ GGR T P Q + +G A A
Sbjct: 227 NGQGEMGMFQHALLAYGRGGEPCTSC--GTVIEKFVVGGRGTHVCPRCQPRPSGASAKPA 284
Query: 287 VGKPRKQAPKGEDSK 301
R++ P+G K
Sbjct: 285 A---RQKRPEGVSPK 296
>gi|323339591|ref|ZP_08079865.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC
25644]
gi|417973868|ref|ZP_12614702.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis ATCC
25644]
gi|323092986|gb|EFZ35584.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC
25644]
gi|346329739|gb|EGX98024.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis ATCC
25644]
Length = 276
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 138/289 (47%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + +K+I G S ++F + GK +L R+GK
Sbjct: 1 MPELPEVETVRRGLNRLIKGKTI-KDVNVLYDKIIVG-SKAEFCKKLSGKKLLDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S + M + ++G + V+ E K++ L DG EL
Sbjct: 59 YLLFRF------SGELTMVSHLRMEG-------KYFVRQKGEPVEKHTHVIFYLMDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L + T++ IS+LGP+ + +F + L KKK IK LLDQ
Sbjct: 106 HYNDVRKFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN ADEVLY AKIHPL LS++ L I + +EKA E G + + +
Sbjct: 166 TLVAGVGNIYADEVLYMAKIHPLTPCNELSRKQSDCLRNSIIDELEKASEKGGTTIRSYA 225
Query: 239 N---------WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + K K G I+ I G R T Y P Q +
Sbjct: 226 NAFLEEGSFQFFLQVYGKTGEKCGRCGTPIEKIVVGQRGTHYCPNCQVM 274
>gi|373494415|ref|ZP_09585020.1| formamidopyrimidine-DNA glycosylase [Eubacterium infirmum F0142]
gi|371968912|gb|EHO86366.1| formamidopyrimidine-DNA glycosylase [Eubacterium infirmum F0142]
Length = 283
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 141/289 (48%), Gaps = 20/289 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ R +E+ + K+I KS I D K I + F ++LGK ILS RK K
Sbjct: 1 MPELPEVESIRSMLEKRVLNKRISKSEIIDI-KAIAKPEPALFGKALLGKKILSVGRKAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + D MTG IYI G + +K + ++++ + DDG
Sbjct: 60 YLIFKFDDTSKLIIHLRMTGNLIYIDGSS-----NLIIKSDENGLPRHARVIINFDDGTR 114
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D+R+F ++ + + I+ LGP+ L + D L+K + +K +L+D
Sbjct: 115 LFFCDQRKFGRLWFYGNGENYTSCGINRLGPEPLSAEFSEDYLCKQLAKTQRQVKTVLID 174
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE--------- 228
QS ISGIGN +DE+L++A I P A +S E L I EVI A++
Sbjct: 175 QSVISGIGNIYSDEILFKAGILPQTRACDISDERAHLLHDAINEVIAHAIKANRSSIEAY 234
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+GA S Q+ + +K K + G +I+ + GR++ + P Q
Sbjct: 235 MLGA-SEQYSDLEDMNVYQKAGKKCKICGAEIEKLKIAGRSSCFCPNCQ 282
>gi|309792770|ref|ZP_07687214.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides
DG-6]
gi|308225180|gb|EFO78964.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides DG6]
Length = 275
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 144/288 (50%), Gaps = 24/288 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ +G+KIV D ++++ DF A ++G+ IL R+ K
Sbjct: 1 MPELPEVEIVARSLAAQVVGRKIVMLEKLDWERMVETPDLPDFCALLIGRTILGVGRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++LD+ + M+G + + G A + D+ ++ + LDDG +
Sbjct: 61 WLLIQLDAGWTLAVHLRMSGNLIVYGPA---------QPVDQ----HTHLVLGLDDGRRI 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD R+F ++RLL DP + + + GP+ L T L++++ +K LLLDQ
Sbjct: 108 FFTDARKFGRLRLL-DPAGIAHLDAAYGPEPLDSHFTSSHLAALLAQRRTKLKPLLLDQG 166
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-VGADSSQFPS 238
+I+G+GN A+E L+ A++HPL A + L I++V+ A++ G+ + +
Sbjct: 167 FIAGLGNIYANEALWIAQLHPLLPANQTPAQHVPALHAAIQQVLHTAIQNQGSSLRNYRN 226
Query: 239 NW--------IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
++ FH ++ I+ I G R+T + P+ Q+L
Sbjct: 227 SYGEAGHNQEHFHVYDRAAQPCERCSTAINRIVVGQRSTFFCPQCQRL 274
>gi|336322721|ref|YP_004602688.1| DNA-formamidopyrimidine glycosylase [Flexistipes sinusarabici DSM
4947]
gi|336106302|gb|AEI14120.1| DNA-formamidopyrimidine glycosylase [Flexistipes sinusarabici DSM
4947]
Length = 265
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 139/279 (49%), Gaps = 18/279 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+V + I+ + KKI ++ DD +V+ + + G+ R+GK
Sbjct: 1 MPELPDVTYFKHYIDRVALHKKI-SAVQCDDERVLKNTNCQGLNRILKGEKFAGTKRRGK 59
Query: 61 NLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + L +S FGMTG I Y+ S K DE KYS+ +E +G
Sbjct: 60 FLIINLANSGKMLILHFGMTGNI--------SYRESEAKTEDE--KKYSQLTIEFHNGSR 109
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSK-KKITIKALLLDQ 178
L + +KR V L++ V I E+GPDAL ++ + F LSK ++ IKA L+DQ
Sbjct: 110 LFWINKRLLGSVHLVDKVDEVATIKEMGPDAL--ELSENLFLKLLSKHERKNIKAFLMDQ 167
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S I+G+GN ++E+L+QA I P + L + K +++++EKA+E+G + FP
Sbjct: 168 SNIAGLGNEYSNELLFQADIDPHRKIKGLGNPERKNIYKVMRDMLEKAIEIGVPVNPFPD 227
Query: 239 NWIF-HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+W+ H + K K + I GRT Y P Q
Sbjct: 228 DWLLAHMDDMTCPKDVKHNLKKERI--AGRTAVYCPVHQ 264
>gi|323703152|ref|ZP_08114806.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans
DSM 574]
gi|323531929|gb|EGB21814.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans
DSM 574]
Length = 277
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILS-AHRKG 59
MPELPEVE R++E+H G I ++ KVI F ++GK + R+G
Sbjct: 1 MPELPEVETVVRSLEKHLAGLTIT-AVDVFMPKVIRSPKPEVFAERIVGKQLQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L L G+T ++++ R D + K++ LD+G +
Sbjct: 60 KYLLLHLSD--------GLTLVVHLRMTG-----RLVYCDAETPVEKHTHVIFHLDNGKQ 106
Query: 120 LSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L FTD+R+F +++L+ PTS + I +LGP+ L E T D + +++ IK LL
Sbjct: 107 LRFTDQRQFGRMQLV--PTSEVNELSGIKDLGPEPLDESFTRDFLKKEIRRRRTRIKPLL 164
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ +I+G+GN ADE L++A++HP + A LS A L K I EVI ++ + +
Sbjct: 165 LDQCFIAGLGNIYADEALFRARVHPERIASDLSPREIARLHKAIVEVIAGGIKHRGTTFR 224
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ + ++RE P GK I I GR++ Y P QKL
Sbjct: 225 DYVDGEGRAGSYQQHLKVYNRENLPCPHC--GKPIARIKVAGRSSYYCPCCQKL 276
>gi|335996439|ref|ZP_08562356.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis SPM0211]
gi|335351509|gb|EGM53000.1| formamidopyrimidine-DNA glycosylase [Lactobacillus ruminis SPM0211]
Length = 276
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 138/289 (47%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + +K+I G S ++F + GK +L R+GK
Sbjct: 1 MPELPEVETVRRGLNRLIKGKTI-KDVNVLYDKIIVG-SKAEFCKKLSGKKLLDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S + M + ++G + V+ E K++ L DG EL
Sbjct: 59 YLLFRF------SGELTMVSHLRMEG-------KYFVRRKGEPVEKHTHVVFYLMDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L + T++ IS+LGP+ + +F + L KKK IK LLDQ
Sbjct: 106 HYNDVRKFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN ADEVLY AKIHPL LS++ L I + +EKA E G + + +
Sbjct: 166 TLVAGVGNIYADEVLYMAKIHPLTPCNELSRKQADCLRNSIIDELEKASEKGGTTIRSYA 225
Query: 239 N---------WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + K K G I+ I G R T Y P Q +
Sbjct: 226 NAFLEEGSFQFFLQVYGKTGEKCGRCGTPIEKIVVGQRGTHYCPNCQVM 274
>gi|385800353|ref|YP_005836757.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM
2228]
gi|309389717|gb|ADO77597.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM
2228]
Length = 276
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 33/293 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPELPEVE + + KK+ + I + N + + + A F+ +LG I R
Sbjct: 1 MPELPEVETVVKGLGPLIRNKKVTEVEIREKNMIAYPKNNIKA--FKKDLLGAKIEKVKR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK + + L++ MTG + VK+ ++ K++ LDDG
Sbjct: 59 RGKYIIIELNNYKNLVIHLRMTGKL-------------LVKEVKDFRDKHTHVIFSLDDG 105
Query: 118 LELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
E+ F + R+F +V L++ P ++ LGP+ L + +++++F + ++ +K+LL
Sbjct: 106 QEIRFNNIRKFGRVYLIDRDQPEQAGGLATLGPEPLSDNLSLEDFKELFKNRRALMKSLL 165
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
L+Q +I+GIGN ADE+L++A I P +TA LS+ + ++E+++K + G S
Sbjct: 166 LNQKFIAGIGNIYADEILFRAAILPDRTADQLSESEKEAIYYNMREILQKGIIYGGTSFS 225
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F H RE+K K + G KI I GR+T + P+ QK
Sbjct: 226 DYVNAFGEKGSFQEELRVHQREEK--KCYQCGTKIKKIKISGRSTYFCPQCQK 276
>gi|333923228|ref|YP_004496808.1| fomramidopyrimidine-DNA glycosylase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333748789|gb|AEF93896.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 277
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILS-AHRKG 59
MPELPEVE R++E+H G I ++ KVI F ++GK + R+G
Sbjct: 1 MPELPEVETVVRSLEKHLAGLTIT-AVDVFMPKVIRSPKPEVFAERIVGKQLQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L L G+T ++++ R D + K++ LD+G +
Sbjct: 60 KYLLLHLSD--------GLTLVVHLRMTG-----RLVYCDAEAPVEKHTHVIFHLDNGKQ 106
Query: 120 LSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L FTD+R+F +++L+ PTS + I +LGP+ L E T D + +++ IK LL
Sbjct: 107 LRFTDQRQFGRMQLV--PTSEVNELSGIKDLGPEPLDESFTRDFLKKEIRRRRTRIKPLL 164
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ +I+G+GN ADE L++A++HP + A LS A L K I EVI ++ + +
Sbjct: 165 LDQCFIAGLGNIYADEALFRARVHPERIASDLSPREIARLHKAIVEVIAGGIKHRGTTFR 224
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ + ++RE P GK I I GR++ Y P QKL
Sbjct: 225 DYVDGEGRAGSYQQHLKVYNRENLPCPHC--GKPIARIKVAGRSSYYCPCCQKL 276
>gi|294658546|ref|XP_460888.2| DEHA2F12034p [Debaryomyces hansenii CBS767]
gi|202953211|emb|CAG89238.2| DEHA2F12034p [Debaryomyces hansenii CBS767]
Length = 426
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 116/232 (50%), Gaps = 43/232 (18%)
Query: 99 DTDEWPSKYSKFFVEL---DDGLELSFTDKRRFAKVRLL--------NDPTSVPPISELG 147
D +EWP ++ KF +EL ++ +L+F D RR KVR L ND P+S LG
Sbjct: 177 DEEEWPPRFVKFEMELQTENERFDLAFVDPRRLGKVRFLSGPLVQSDNDLMKQDPLSALG 236
Query: 148 PDAL--LE-------------------PMTVDEFTDSLSKKKITIKALLLDQSYISGIGN 186
PD LE ++++EF + KK IK+LLL+Q + +G+GN
Sbjct: 237 PDYSKPLEISRTEFTTGDPDPDNHGKCRLSLEEFNKLILSKKKPIKSLLLEQEFFAGVGN 296
Query: 187 WVADEVLYQAKIHPLQTAVSLSKES------CATLLKCIKEVIEKALEVGADSSQFPSNW 240
WV DE++Y A+IHP + S + L + V E ++ V D SQFPSNW
Sbjct: 297 WVGDEIIYHARIHPNEVLSSKIPKGDSVDSIIERLYNSLLYVCELSVRVEGDVSQFPSNW 356
Query: 241 IF-----HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAV 287
+ R+ P +G ++D +T GGRT+ +VP+LQK+ AA +
Sbjct: 357 LMIYRWGKRRKNSPKPKTDEGYEVDHVTVGGRTSCFVPKLQKMIRKSAASEI 408
>gi|298530672|ref|ZP_07018074.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510046|gb|EFI33950.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 273
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + G+ I + I +V+ G +F+ +LG+ +L R+ K
Sbjct: 1 MPELPEVETIAAGLAPLVSGRSI-RDIFLMQARVVRG-DELEFQRRLLGRKVLDVRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD P F MTG ++ V D P K++ ++L D + +
Sbjct: 59 LLILDLDGPLHLVFHLKMTGKVW-------------VPDKGVQPGKHTHLILDLGDEVYV 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D+RRF V L P S LGP+ L ++ +FTD +K IK+LLLDQ
Sbjct: 106 FFDDQRRFGYVTALTPPELESWDFYRGLGPEPL--HLSSQDFTDIFQGRKARIKSLLLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
I+GIGN ADE LY A IHP AV LS + L +++V+++A++ G S +
Sbjct: 164 QVIAGIGNIYADEALYMAGIHPCTRAVDLSGDQLEALHCSLQQVLQEAIQAGGSSFRDYR 223
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F N+ + ++ P G ++ GR++ + P+ Q
Sbjct: 224 NALGVAGLFQENFKVYGKKGLPCPEC--GANLESTKVAGRSSCFCPQCQ 270
>gi|392425102|ref|YP_006466096.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus
acidiphilus SJ4]
gi|391355065|gb|AFM40764.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus
acidiphilus SJ4]
Length = 273
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + H +I K I + G DF+ VLG+ IL+ R+GK
Sbjct: 1 MPELPEVETIRRTLAVHITDLRI-KDISLKWPSAVSGWRDKDFKELVLGRQILALDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD MTG R + P K++ + L+ G E+
Sbjct: 60 YLLIHLDEEITLIAHMRMTG-------------RLNYYPEPKEPDKHTHVVLTLERG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F+D R+F +++ + PTS+ +S+LGP+ L T + D L+KKK+ IK LL
Sbjct: 106 HFSDVRKFGRIQAI--PTSLCIQESSLSKLGPEPLDPQFTANMLRDRLAKKKVNIKGALL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS--- 233
DQ ++G+GN ADE L++A I P + A SL+ E L + I+ V++ ++ S
Sbjct: 164 DQHVLAGLGNIYADESLFRAGISPQRPANSLTDEEIKHLHRAIQAVLQAGIDARGTSFRD 223
Query: 234 --------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
QF + R P + + G+ ++ + GRTT Y P+ QK
Sbjct: 224 YRDANGEKGQFEQALQVYGRGGHPCR--ICGETLERLRLAGRTTVYCPKCQK 273
>gi|229552557|ref|ZP_04441282.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus
LMS2-1]
gi|258539930|ref|YP_003174429.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc
705]
gi|385835579|ref|YP_005873353.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus ATCC
8530]
gi|229314109|gb|EEN80082.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus
LMS2-1]
gi|257151606|emb|CAR90578.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc
705]
gi|355395070|gb|AER64500.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus ATCC
8530]
Length = 282
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 29/292 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++A F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKDKKITAISTNWEKILINGLTA--FQKQVVGAAVTTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKTPLDKHDHVTFTFQDGSQL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + ++F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSENDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL I + ++ A+ G S+
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEVHTLHDAIIKELDDAIAAGGTSAHTYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + RE P G I I G R T Y P Q L+
Sbjct: 227 DAEGNRGSFQDALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|320160672|ref|YP_004173896.1| formamidopyrimidine-DNA glycosylase [Anaerolinea thermophila UNI-1]
gi|319994525|dbj|BAJ63296.1| formamidopyrimidine-DNA glycolase [Anaerolinea thermophila UNI-1]
Length = 271
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 148/290 (51%), Gaps = 32/290 (11%)
Query: 1 MPELPEVEAARRAIEE------HCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILS 54
MPELPEV+ + + +GK+I + +A K + F+ ++ G+ I
Sbjct: 1 MPELPEVQTIVSVLRDGGRGAPSILGKQITAANVAW-QKTLAMPDLFTFQQNITGEEIRD 59
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R+GK +W+ L S M+G + ++ S ++ D + ++E
Sbjct: 60 IRRRGKFIWIILQSAHL-FIHLRMSGDVRVEPST------SPLQLHD-------RLWLEF 105
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
DGL L F D R+F +V L +P V I +LGP+ L E ++ +F L+K + +KAL
Sbjct: 106 SDGLRLVFNDPRKFGRVWLAENPQDV--IGDLGPEPLDESLSPTQFHQRLTKNRRQLKAL 163
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS- 233
LLDQ++++G+GN +DE L+ AK+HP +++ SLS E A LL+ I++V+E+ + S
Sbjct: 164 LLDQNFLAGVGNIYSDEALFLAKLHPKRSSDSLSPEESARLLQAIRQVLEEGIRKNGASI 223
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+F +++ + R +P + G I+ IT R T + P Q+
Sbjct: 224 DWVYRGGEFQNSFRVYQRTGEPCP--ICGTPIERITVSQRGTHFCPSCQR 271
>gi|436833874|ref|YP_007319090.1| DNA-formamidopyrimidine glycosylase [Fibrella aestuarina BUZ 2]
gi|384065287|emb|CCG98497.1| DNA-formamidopyrimidine glycosylase [Fibrella aestuarina BUZ 2]
Length = 272
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 33/291 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E + + I SI +D K++ + +E + G+ R GK
Sbjct: 1 MPELPEVEIRRMYLEATSLAQPI-DSITVEDKKLLTTEFDTLYE-KLEGRQFTHTRRVGK 58
Query: 61 NLWLRLDSP-PFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
NL++ D P FGMTG + +Y ++V ++++ +G
Sbjct: 59 NLFIYTDDPRVILRMHFGMTGDL--------EYYHNSVDR-----PRHARIVFYFTNGFC 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F R+F ++ L+ND + ++ PDAL + + D L K++ IK +LLDQS
Sbjct: 106 LGFICPRKFERIGLVNDVDEFLRLKKIAPDAL--SIELGTLRDKLKKRRSPIKPVLLDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+G+GNW+ DEVL+QAK+HP + LS+ + + I+ V++ A+ A FP +
Sbjct: 164 TTAGLGNWIVDEVLFQAKVHPSAVSAELSEAEVEAIHEAIQLVLKTAIAKEAVYKDFPRS 223
Query: 240 WIFHSRE------------KKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
++ H RE K + G I+ GGRTT + P Q L
Sbjct: 224 FLIHVREWDDSPYDDVEAHKVCPRC---GTPIERTEVGGRTTFFCPNEQVL 271
>gi|418245589|ref|ZP_12871994.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Corynebacterium glutamicum ATCC 14067]
gi|354510500|gb|EHE83424.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Corynebacterium glutamicum ATCC 14067]
Length = 286
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 123/243 (50%), Gaps = 23/243 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R +E+H +G IV + + + + + EA++ G + +A R+G
Sbjct: 1 MPELPEVEVVRHGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60
Query: 60 KNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K LWL L D+P + GM+G + IK + D S + +
Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHLRAK 107
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKIT 170
VELD+G E+ F D+R F L + VP +S + D L E +L +K
Sbjct: 108 VELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSRKSE 167
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V+ KAL G
Sbjct: 168 IKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKALAQG 227
Query: 231 ADS 233
S
Sbjct: 228 GTS 230
>gi|421768891|ref|ZP_16205601.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus
LRHMDP2]
gi|421770956|ref|ZP_16207617.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus
LRHMDP3]
gi|411185740|gb|EKS52867.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus
LRHMDP2]
gi|411186391|gb|EKS53515.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus
LRHMDP3]
Length = 282
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 138/292 (47%), Gaps = 29/292 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++A F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLTA--FQKQVVGAAVTTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKAPLDKHDHVTFTFQDGSQL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + +F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL I + ++ A+ G S+
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEIHTLHDAIIKELDDAIAAGGTSAHTYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + RE P G I I G R T Y P Q L+
Sbjct: 227 DAEGNRGSFQDALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|306490892|gb|ADM95010.1| formamidopyrimidine-DNA glycosylase [uncultured candidate division
JS1 bacterium]
Length = 280
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 8/227 (3%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ I KKI K I + ++I + +F + G I R+GK
Sbjct: 1 MPELPEVETIRRDLEKEVINKKINK-IKLNLPRLIKTPTIDEFSRRLKGTYIKKVSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L+S F GM+G + + +T +++ D ++ K+ F +D +
Sbjct: 60 YILCFLNSGECLVFHLGMSGCLLYEKNNLT----ASISDINK---KHHHVFFFFEDDTTM 112
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D R+F K+ LLN + + LG + L E T +EF+ + KK IK+L+++Q Y
Sbjct: 113 IYNDIRQFGKIWLLNKNEKLAEVDSLGLEPLEEQFTFNEFSRIIENKKGNIKSLIMNQKY 172
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
I+GIGN A+E+L+QA IHPL+ + SL+ L I++ + KA+
Sbjct: 173 IAGIGNIYANEILFQAGIHPLRRSDSLTTHEIKKLYYSIQDTLAKAV 219
>gi|406994133|gb|EKE13175.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
[uncultured bacterium]
Length = 275
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 140/292 (47%), Gaps = 32/292 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE + + ++ G+KIV ++ D + + S F +V GK I S R K
Sbjct: 1 MPELPETQTIAALLNKNLKGRKIVTVQVSKDYRALP--STEIFIKAVTGKEIKSVRRVAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+ + L++ F MTG + + + ++ K + LD+G++L
Sbjct: 59 NILIELENGNHILFHLAMTGRLLLWNDKIGN-------------ERWVKVILHLDNGVKL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F+D R F K +L+ + + GP+ L + T + D L K+ IK LLDQ
Sbjct: 106 TFSDMRVFGKAAVLSPKQTQELEARYGPEPLDKKTTHQQLVDRLKTKRTNIKNALLDQEI 165
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------- 233
ISGIGN A + L+ AKI+P ++ E+ LL I+ V+++++++G +
Sbjct: 166 ISGIGNIYATDALFLAKINPFTKTSEITLENANRLLDSIRSVLKESIKLGGSTLNDKMYV 225
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
++ ++ +S+EK P V G K+ FI GR T + P Q LN
Sbjct: 226 DPFGKEGKYQEHFKIYSKEKCP----VCGSKVSFIKISGRGTYFCPSCQPLN 273
>gi|83816661|ref|YP_444607.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855]
gi|83758055|gb|ABC46168.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855]
Length = 265
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 25/281 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+ RR + + + + I + + D + DG+ + G+ + HR GK
Sbjct: 1 MPELPDAVVYRRRLADAALDRPIADATVVDPLILGDGLEPHRLGEVLRGRTLTDTHRHGK 60
Query: 61 NLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
++++R + + + FGMTG + + D +Y+ V +DG
Sbjct: 61 HVFVRYGEETGWLALHFGMTGRVQVV--------------PDGTMPEYAYVQVHFEDGGA 106
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L+F R+FA+VRL++ P + +LGPDA VD F + ++ IK LLDQS
Sbjct: 107 LAFECPRKFARVRLVDTPDAFVEAKDLGPDA--RRADVDAFLAPFASRRGAIKGRLLDQS 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF-PS 238
++G+GN ADE LYQ IHP T LS+ L I+ V++ A+ V AD P
Sbjct: 165 VVAGLGNIYADEALYQEGIHPRTTVPELSETDLRGLYDAIQRVLDAAIAVDADPEALDPD 224
Query: 239 NWIFHSR---EKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
++ R E P G +D T GRT + P Q
Sbjct: 225 RFMLPHRYGDEHCPKT----GVPLDTETVSGRTAYFSPTRQ 261
>gi|435853198|ref|YP_007314517.1| formamidopyrimidine-DNA glycosylase Fpg [Halobacteroides halobius
DSM 5150]
gi|433669609|gb|AGB40424.1| formamidopyrimidine-DNA glycosylase Fpg [Halobacteroides halobius
DSM 5150]
Length = 274
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 27/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ ++ + K+I I + ++I DF+ ++G I R+GK
Sbjct: 1 MPELPEVQTVVDTLQGFILNKEITDVKIKQE-RLIAQSKPEDFKEILIGSKIEEVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + LD+ + MTG R DE KY F + EL
Sbjct: 60 YIIIELDNRYYLVTHLRMTG-------------RFVYTKQDEEHDKYDYIFFKFRGADEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
KR+F +V L+ D +++LGP+ L + T++ F + LS ++ IK LLL+Q +
Sbjct: 107 RLGSKRQFTRVYLVKDLEDAGSLTKLGPEPLSDEFTLELFKEMLSTRRGRIKPLLLNQKF 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL-----------EV 229
++G+GN DE +Y ++IHPL+TA +LS E L K IK+V+ + + +
Sbjct: 167 LAGLGNIYVDEAIYISQIHPLRTADTLSLEEIERLYKAIKQVLREGIKHRGTTKWDYVDA 226
Query: 230 GADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ ++ + + RE + G ++D I GGR++ + P Q+
Sbjct: 227 SGQAGEYQNYLRAYGREGEECNRC--GSELDRIKVGGRSSYFCPSCQQ 272
>gi|255727312|ref|XP_002548582.1| hypothetical protein CTRG_02879 [Candida tropicalis MYA-3404]
gi|240134506|gb|EER34061.1| hypothetical protein CTRG_02879 [Candida tropicalis MYA-3404]
Length = 286
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 67/272 (24%)
Query: 74 FQFGMTGAIYIKGV---------------------AVTQYKRSAVKDTDE-WPSKYSKFF 111
FGMTG + ++ V AV + K ++ +E WP ++SKF
Sbjct: 1 MHFGMTGMVKLRNVKSHLIMMENGGDKKALKKIEDAVNEIKDEEDENENEEWPPRFSKFD 60
Query: 112 VEL---DDGLELSFTDKRRFAKVRLL--------NDPTSVPPISELGPD----------- 149
+EL D +E +FTD RR ++RLL D + P++ LGPD
Sbjct: 61 MELTKDDHKIEFAFTDARRLGRIRLLKGEEVKTNEDLLNTAPLNALGPDYSKPEVPPKQT 120
Query: 150 ---ALLEP---------MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAK 197
+P +T+ EF + KK IK+LLLDQ++ +G+GNWV DE+++QA+
Sbjct: 121 KPFVFGDPDPDHHGRPRLTIYEFNKLILSKKKPIKSLLLDQAFFAGVGNWVGDEIVFQAR 180
Query: 198 IHPLQTAVSLSKES--------CATLLKCIKEVIEKALEVGADSSQFPSNWIFHSRE--- 246
IHP + + L + V E+A+ V D+S+FP NW+ R
Sbjct: 181 IHPNEVISNKIANDGSDDIHPVVQKLYDSLISVCEEAVLVEGDTSKFPKNWLMLYRWGKG 240
Query: 247 KKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+K + G +D +T GGRT+ Y P+LQK+
Sbjct: 241 RKEKRKTPQGYSLDHVTVGGRTSCYCPDLQKM 272
>gi|303246702|ref|ZP_07332980.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans
JJ]
gi|302492042|gb|EFL51920.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans
JJ]
Length = 281
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 143/302 (47%), Gaps = 46/302 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RA+ G+ V ++ D KV+ G + + F +++G+ I + R+
Sbjct: 1 MPELPEVETIARALAPGLTGRA-VTGLVVPDPKVLAGPRTKAAFAKNLVGRPITTVDRRA 59
Query: 60 KNLWLRL--------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K L +RL D+ +F MTG +I D + ++
Sbjct: 60 KLLLVRLGPRPEVAGDAAAVLAFHLKMTGRFHIA-------------SADAPVPERARLL 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPP---ISELGPDALLEP--MTVDEFTDSLSK 166
V+L+DG L F+D RRF RL + P + + LGP EP MT + FT +LS+
Sbjct: 107 VDLNDGQALVFSDLRRFGTARLFS-PEGLAAWDFYASLGP----EPWDMTPEAFTTALSR 161
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
+ IKA+LLDQ+ I+GIGN ADE L+ A IHP A +S LL I+ VI +A
Sbjct: 162 RSTRIKAVLLDQTVIAGIGNIYADESLHAAGIHPETRAGDISPSRAEKLLAAIQAVIARA 221
Query: 227 LEVGADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPEL 275
+ G + + F + + + + +P G K+ + GRT+ + P
Sbjct: 222 IAAGGSTIRDYRTPDGVEGGFQNEFAVYGKAGEPCPDC--GTKLVAVKVAGRTSTFCPTC 279
Query: 276 QK 277
QK
Sbjct: 280 QK 281
>gi|357041236|ref|ZP_09103015.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum gibsoniae DSM
7213]
gi|355355573|gb|EHG03383.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum gibsoniae DSM
7213]
Length = 276
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +++ G I IA K+I +F A V G+ I R+GK
Sbjct: 1 MPELPEVETVKRTLDKKITGLTITGVDIAMP-KIIREPDPENFAAQVTGRKITRLGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L MTG R DE K++ +L DG EL
Sbjct: 60 YLLLYLTGENVLIIHLRMTG-------------RLVYTAPDEPLPKHTHVIFKLSDGNEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F ++ L D V + +LGP+ L + D L +K+ IK+LLLDQ
Sbjct: 107 RFNDIRQFGRLLLTPKKDLNKVKGLKDLGPEPLEREFSRDFLRRELKRKRTRIKSLLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++I+G+GN DE L++A++HP++ A SL+ A L I EV+++ ++ S
Sbjct: 167 TFIAGLGNIYVDEALHRARLHPMRIASSLTPREVANLYHSIVEVLQEGIQNRGTSFRDYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ ++RE +P G I I GR++ + P Q+
Sbjct: 227 DGDGRKGNYQELLRVYNREGEPCPHC--GTAITRIKVSGRSSYFCPACQR 274
>gi|25028531|ref|NP_738585.1| formamidopyrimidine-DNA glycosylase [Corynebacterium efficiens
YS-314]
gi|259507586|ref|ZP_05750486.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens
YS-314]
gi|29611717|sp|Q8FP17.3|FPG_COREF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|23493816|dbj|BAC18785.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium
efficiens YS-314]
gi|259164765|gb|EEW49319.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens
YS-314]
Length = 285
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +EEH +G+ IV + + + ++ EA++ G + + +R+G
Sbjct: 1 MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG 60
Query: 60 KNLWLRLD--SPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
K LWL LD + PS GM+G + VK D + + +
Sbjct: 61 KFLWLELDDVAQQAPSGLGLLVHLGMSGQML-------------VKSPDATLNPHLRARA 107
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
ELDDG E+ F D+R F L VP +S + D L + + + L K I
Sbjct: 108 ELDDGNEVWFVDQRTFGYWWLGELVDGVPGRVSHIARDLLDDALDIPALAAVLKTKNTEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLL+Q +SGIGN ADE+L++A IHP Q A +S LL+ +EV+ +AL+ G
Sbjct: 168 KRLLLNQEIVSGIGNIYADEMLWEAGIHPRQKASRISLTRLVALLEAGREVMTRALDQGG 227
Query: 232 DS 233
S
Sbjct: 228 TS 229
>gi|116492457|ref|YP_804192.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Pediococcus pentosaceus ATCC 25745]
gi|421894599|ref|ZP_16325086.1| formamidopyrimidine-DNA glycosylase [Pediococcus pentosaceus IE-3]
gi|122266079|sp|Q03GC2.1|FPG_PEDPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|116102607|gb|ABJ67750.1| DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus
ATCC 25745]
gi|385272514|emb|CCG90458.1| formamidopyrimidine-DNA glycosylase [Pediococcus pentosaceus IE-3]
Length = 275
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 145/291 (49%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK IV +++ +K++ A F + GK IL+ R+GK
Sbjct: 1 MPELPEVETVRRGLAALVEGK-IVTNVVVRYSKMVSP-KAEIFAEELEGKKILNVRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + S + M + ++G K S V +E+ K+ ELDDG +L
Sbjct: 59 YLLIDF------SGDYTMVSHLRMEG------KYSVVDRREEY-GKHDHVIFELDDGKDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + V + +GP+ E +T++ T L +K +K+ LLDQ
Sbjct: 106 RYNDTRKFGRMNLVPTGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------V 229
S I+G+GN ADEVL+ +KIHP Q + +L+ E A L + I E ++ A+E +
Sbjct: 166 SMIAGLGNIYADEVLWLSKIHPQQISNTLTDEEIAILRESIFEELQLAIEAKGTTVFSYL 225
Query: 230 GAD--SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
AD + F + + R+ P + G I+ I R T + P Q L
Sbjct: 226 NADGHAGSFQNQLHVYHRQGLPCQRC--GTPIERIKVAQRGTHFCPHCQVL 274
>gi|383826401|ref|ZP_09981528.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium xenopi RIVM700367]
gi|383332701|gb|EID11176.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium xenopi RIVM700367]
Length = 285
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 133/295 (45%), Gaps = 36/295 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H +GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQTHVVGKAITAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLD-SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWLRLD + GM+G + + + T + R A LDDG
Sbjct: 61 KYLWLRLDDADTALVVHLGMSGQMLLGAIPNTAHLRIAAV---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D ++VP P++ L D L D + + +K +K
Sbjct: 106 RLSFVDQRTFGGWLLADLVTVDGSAVPVPVAHLARDPLDPKFDADAVVNVMRRKHSELKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL------ 227
LLDQ+ +SGIGN ADE L++AK+H + A +L + A +L+ +V+ AL
Sbjct: 166 QLLDQTVVSGIGNIYADEALWRAKVHGSRLAAALPRRQLAVVLQAAADVMRDALAHGGTS 225
Query: 228 ------EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V +S F + + RE +P + G I R++ Y P Q
Sbjct: 226 FDSLYVNVNGESGYFNRSLDAYGRENQPCRRC--GSLIRREKFMNRSSFYCPRCQ 278
>gi|383754332|ref|YP_005433235.1| putative formamidopyrimidine-DNA glycosylase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366384|dbj|BAL83212.1| putative formamidopyrimidine-DNA glycosylase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 276
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR ++ GKKI+ I ++I F A V G+ I R+GK
Sbjct: 1 MPEMPEVEIIRRYLDTQVAGKKIMDLDIRLP-RMIKWPDTEGFRALVTGRTIKKMARRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ F MTG R + T +++ +L++G L
Sbjct: 60 YLLMELDNDNEVVFHLRMTG-------------RLVYEPTGNTADSHARVIFQLENGGAL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R + L + + ++E+GP+ L T + S++K IK+ LL+Q
Sbjct: 107 VYGDTRTLGTIHGLKPQELIMLKGLAEMGPEPLSVEFTPAYLEQAASQRKTAIKSFLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
YI GIGN ADE L+ A IHPL+ A SLS E C L + + +VI +E G + +
Sbjct: 167 KYIGGIGNIYADEALFLAGIHPLRPAKSLSAEECRRLWESVNQVIAAGIEDGGTTFRDYQ 226
Query: 239 N-----------WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
N + R+ +P + I+ IT GGR T + P Q+
Sbjct: 227 NGEGGKGSHQEHLYVYGRKGEPCRNC--HTAIERITVGGRGTHFCPHCQE 274
>gi|295132006|ref|YP_003582682.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87]
gi|294980021|gb|ADF50486.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87]
Length = 263
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 139/280 (49%), Gaps = 23/280 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV ++ + + KKIV+ I D K+ A DFE + A S R GK
Sbjct: 1 MPELPEVAYQKKYADATILHKKIVE-IETGDKKIYQSAKA-DFEKILTDNAFESTSRIGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L+L+L FGMTG + Y+ D+ P KY++ + +D +L
Sbjct: 59 YLFLKLKKNGVLVMHFGMTGKL-------DYYQH------DDTP-KYTQLKLIFEDHSKL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+FT R+FAK+ L LG DAL +T EF + TIK LL++QS
Sbjct: 105 AFTCPRKFAKLYLAKSVEEFQQSHNLGADAL--AITEKEFLKICDGRSGTIKGLLMNQSL 162
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
I+GIGN ADEVL+Q KIHP +LS++ ++ I+EV++ E + + P ++
Sbjct: 163 IAGIGNMYADEVLFQTKIHPKTKVNTLSQKQLKSIFDKIEEVLKVVKEARIEGKRVPESY 222
Query: 241 IFHSREKKPGKAF---VDGKKIDFITAGGRTTAYVPELQK 277
+ +R +K G+ + KI+ GRTT + P QK
Sbjct: 223 L--TRIRKEGEGADCPRNNGKIEQTKVSGRTTYFCPVCQK 260
>gi|418070924|ref|ZP_12708199.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus rhamnosus R0011]
gi|423078735|ref|ZP_17067412.1| DNA-formamidopyrimidine glycosylase [Lactobacillus rhamnosus ATCC
21052]
gi|357540344|gb|EHJ24361.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus rhamnosus R0011]
gi|357549023|gb|EHJ30871.1| DNA-formamidopyrimidine glycosylase [Lactobacillus rhamnosus ATCC
21052]
Length = 282
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 29/292 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++ F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLAT--FQKQVVGAAVNTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKTPLDKHDHVTFTFRDGSQL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + ++F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSENDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL I + ++ A+ G S+
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEIHTLHDAIIKELDDAIAAGGTSAHTYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + RE P G I I G R T Y P Q L+
Sbjct: 227 DAEGNRGSFQDALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|413943562|gb|AFW76211.1| hypothetical protein ZEAMMB73_188344 [Zea mays]
Length = 106
Score = 121 bits (303), Expect = 7e-25, Method: Composition-based stats.
Identities = 55/98 (56%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVEAARRA++ HC+G++I + ++ D V+ + FE +++G+ I++A R+G
Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAV 97
KNLWL+LD+PPFPSFQFGM GAIYIKG+ VT YKR +
Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRQVI 98
>gi|308803987|ref|XP_003079306.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus
tauri]
gi|116057761|emb|CAL53964.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS), partial
[Ostreococcus tauri]
Length = 683
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 106 KYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLS 165
+++K D+G+EL++ D RRF K++L+ D V I LG D D F
Sbjct: 3 RFAKPTFAFDNGIELAYVDPRRFGKIKLVRDVKEV--IGGLGVDPSKALPEGDAFAAMWK 60
Query: 166 KKKITIKALLLDQSYISGIGNWVAD------------------EVLYQAKIHPLQTAVSL 207
++ IK L+DQ ++GIGNW+AD E+LY+A++HP A +
Sbjct: 61 RRSAPIKTALMDQKIMAGIGNWMADGMFERTRTDDAIASLRSTEILYRARVHPETRANEM 120
Query: 208 SKESCATLLKCIKEVIEKALEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGR 267
+ + + I EV+ A +D FPS+W+FH R K A V+G I FI GGR
Sbjct: 121 TDSQLEAIRERILEVVTVACAANSDHDLFPSDWLFHQRWGKTDGAKVNGDAIKFIEVGGR 180
Query: 268 TTAYVPELQ 276
TTAYVP+LQ
Sbjct: 181 TTAYVPKLQ 189
>gi|433461403|ref|ZP_20419013.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Halobacillus sp. BAB-2008]
gi|432190230|gb|ELK47273.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Halobacillus sp. BAB-2008]
Length = 279
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 25/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + IGK+I + N + +F+ + G+ I RKGK
Sbjct: 1 MPELPEVETVRRTLHHLAIGKEIASVSVYWGNIIKHPQDPKEFDRLLRGQTIRDIERKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +LD S M G K + + E P K++ DG EL
Sbjct: 61 FLIFQLDDLSLVS-HLRMEG------------KFGVYESSMEKP-KHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + +SV P+ +LGPD E T+D F L K +KA+LLDQ
Sbjct: 107 RYNDVRKFGTMHAFRKGEESSVKPLVQLGPDPFEEAFTLDYFYMKLMKTSRNMKAVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S ++G+GN DE L++AK+HP + A +L++E A + + VI +A+E G + +
Sbjct: 167 SIVAGLGNIYVDEALFRAKVHPERIANTLTREEAAKVREASIAVILEAIEQGGTTIRSYL 226
Query: 239 N-----WIFHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKL 278
N +F + + GK D G I+ GR T P Q+L
Sbjct: 227 NSQGEIGMFQQKLRVYGKQDEDCVECGTPIEKRKVSGRGTHICPNCQRL 275
>gi|258508755|ref|YP_003171506.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG]
gi|385828416|ref|YP_005866188.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG]
gi|257148682|emb|CAR87655.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG]
gi|259650061|dbj|BAI42223.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG]
Length = 282
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 137/292 (46%), Gaps = 29/292 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++ F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLAT--FQKQVVGAAVNTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKTPLDKHDHVTFTFQDGSQL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + +F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL I + ++ A+ G S+
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEIHTLHDAIIKELDDAIAAGGTSAHTYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + RE P G I I G R T Y P Q L+
Sbjct: 227 DAEGNRGSFQDALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|433443887|ref|ZP_20409010.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus
TNO-09.006]
gi|432001861|gb|ELK22728.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus
TNO-09.006]
Length = 273
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 130/289 (44%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +GK I + + +K+I + F + G+ I R+GK
Sbjct: 1 MPELPEVEMVRRTLLPLVVGKTI-ERVKVHWSKIIQHPDVATFCECLKGQTIHDIQRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +LD S M G R + D +++ F D EL
Sbjct: 60 FLLFQLDDVVLVS-HLRMEG-------------RYIYEKEDAPFDQHTHIFFTFTDQTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L N + VPP+S +G + E TV TD L + K TIKA LLDQ
Sbjct: 106 RYRDVRKFGTMHLFNKGEEFRVPPLSSIGVEPFDEQFTVAWLTDRLQRTKRTIKATLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++G+GN DEVL+++ IHP +TA +L+ L + I + I++A+E G + +
Sbjct: 166 TIVAGLGNIYVDEVLFRSSIHPERTATTLTIREIEALHEAIVQTIQEAIEKGGSTVRTYV 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + R P + G I T R T Y Q
Sbjct: 226 NTQGKTGTFQTQLYVYGRANMPCRR--CGNPISKTTVANRGTHYCKHCQ 272
>gi|199599522|ref|ZP_03212911.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001]
gi|199589591|gb|EDY97708.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001]
Length = 282
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 136/291 (46%), Gaps = 29/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ KKI + +I+G++ F+ V+G A+ + R+GK
Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLAT--FQKQVVGAAVNTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL++ M G Y+ V D K+ DG +L
Sbjct: 59 YLLIRLNNGMTIVSHLRMEGRYYV------------VSDAKTPLDKHDHVTFTFQDGSQL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++RL++ VP +++LGP+ + +F L + IK++LLDQ
Sbjct: 107 RYRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++GIGN ADEVL+ +K++PLQ A +L+K TL I + ++ A+ G S+
Sbjct: 167 TVVAGIGNIYADEVLWLSKLNPLQPANTLTKAEVHTLHDAIIKELDDAIAAGGTSAHTYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
F + RE P G I I G R T Y P Q L
Sbjct: 227 DAKGNRGSFQDALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPL 275
>gi|159897723|ref|YP_001543970.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus DSM
785]
gi|238687075|sp|A9B0X2.1|FPG_HERA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|159890762|gb|ABX03842.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus DSM
785]
Length = 273
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 122/229 (53%), Gaps = 15/229 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E+ +G+ V K++D S F ++ + I R+ K
Sbjct: 1 MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ MTG + + DE +++ V LD+G EL
Sbjct: 61 YLLIELDNHETLIVHLRMTGQMLVVA-------------ADEPADRHTHVVVALDNGREL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D R+F + L+ D + V +++ LGP+ L + T+D+F LS+K IK LLDQS
Sbjct: 108 RFHDPRKFGRWSLV-DRSGVAALNQRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQS 166
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
++G+GN ADE L+ AKIHPL++A SL+ A L + IK V+ ++E
Sbjct: 167 VLAGVGNIYADEALWLAKIHPLRSANSLNANEIAELFEAIKTVLRNSIE 215
>gi|402818280|ref|ZP_10867864.1| formamidopyrimidine-DNA glycosylase MutM [Paenibacillus alvei DSM
29]
gi|402504027|gb|EJW14558.1| formamidopyrimidine-DNA glycosylase MutM [Paenibacillus alvei DSM
29]
Length = 276
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 29/292 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ + GK+I + + + + F ++ G I R+GK
Sbjct: 1 MPELPEVETVKQTLNTLVAGKRIERVTVTLPRIIQRPLEIEQFCDALQGHTIERVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD S M G R V DE K++ DDG EL
Sbjct: 61 FLRILLDGLVLVS-HLRMEG-------------RYGVYKADEPVEKHTHVIFHFDDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + +PP+ +LG + L TV+ F +++ +++ IK +LL+Q
Sbjct: 107 RYKDVRQFGTMHLFAAGEEWELPPLHKLGVEPLSAEFTVERFAEAMRRRRSFIKPVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ GIGN DE L++A IHP + A L+ E A L + I + +++A+E G S
Sbjct: 167 HIVVGIGNIYVDEALFRAGIHPNRAADELTDEEYALLHRSIIDTLQEAVEAGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + R+ +P G I+ GGR T Y P+ Q+L+
Sbjct: 227 NGQGEMGMFQHQLQMYGRQGEP--CVRCGSIIEKSVVGGRGTHYCPKCQQLS 276
>gi|73749072|ref|YP_308311.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1]
gi|147669837|ref|YP_001214655.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Dehalococcoides sp. BAV1]
gi|289433049|ref|YP_003462922.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT]
gi|73660788|emb|CAI83395.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1]
gi|146270785|gb|ABQ17777.1| DNA-(apurinic or apyrimidinic site) lyase [Dehalococcoides sp.
BAV1]
gi|288946769|gb|ADC74466.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT]
Length = 270
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 127/237 (53%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I H +GKKI++ + A K + A DF A G + R+GK
Sbjct: 1 MPELPEVETVKNEIMPHLLGKKIIR-MEALWAKTLCPPEA-DFNALASGTCVTGLSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L S F S M+G + +A++ + ++++ L++G ++
Sbjct: 59 YIIISLSSGLFISVHLKMSGGL------------TAIRAENGQAPRFTRAIFHLENGEQV 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
FTD R+F ++ LL SV + +LGP+ L E T F LS +K IKA+LLDQ
Sbjct: 107 YFTDIRKFGRITLLAGLDSV--LEKLGPEPLEETFTAGVFWHRLSGRKGPIKAVLLDQKV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-GADSSQF 236
++G+GN ADE L++A ++PL++A SLS L I+ V+ KA++ GA S +
Sbjct: 165 LAGVGNMYADEALFKACLNPLRSAESLSMAEVERLHSAIQSVLHKAIQNKGASVSTY 221
>gi|452204054|ref|YP_007484187.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides mccartyi
DCMB5]
gi|452205553|ref|YP_007485682.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides mccartyi
BTF08]
gi|452111113|gb|AGG06845.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides mccartyi
DCMB5]
gi|452112609|gb|AGG08340.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides mccartyi
BTF08]
Length = 270
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 127/237 (53%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I H +GKKI++ + A K + A DF A G + R+GK
Sbjct: 1 MPELPEVETVKNEIMPHLLGKKIIR-MEALWAKTLCPPEA-DFNALASGTCVTGLSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L S F S M+G + +A++ + ++++ L++G ++
Sbjct: 59 YIIISLSSGLFISVHLKMSGGL------------TAIRAENGQAPRFTRAIFHLENGEQV 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
FTD R+F ++ LL SV + +LGP+ L E T F LS +K IKA+LLDQ
Sbjct: 107 YFTDIRKFGRITLLAGLDSV--LEKLGPEPLEETFTAGVFWHRLSGRKGPIKAVLLDQKV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-GADSSQF 236
++G+GN ADE L++A ++PL++A SLS L I+ V+ KA++ GA S +
Sbjct: 165 LAGVGNMYADEALFKACLNPLRSAESLSMAEVERLHSAIQSVLHKAIQNKGASVSTY 221
>gi|425735353|ref|ZP_18853667.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Brevibacterium casei S18]
gi|425479759|gb|EKU46931.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Brevibacterium casei S18]
Length = 315
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 126/256 (49%), Gaps = 30/256 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD-------DNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE+ RR ++E G ++ + + D + ID +A+ F V G +I
Sbjct: 1 MPELPEVESVRRGVDEWTAGARVTAAEVVDPRILGTTSARRIDEATAAAFAERVTGASIT 60
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
A R+GK +WL LD GM+G + + A DE ++++ +
Sbjct: 61 GAERRGKFMWLTLDVDAGLLIHLGMSGQLRVHLAA------------DE-THRHTRAVLR 107
Query: 114 LDDG---LELSFTDKRRFAKVR---LLNDPTSVPPIS--ELGPDALLEPMTVDEFTDSLS 165
L+ G +L F D+R F + L+ + P S + PD L + V+ D+L+
Sbjct: 108 LERGEQRYDLRFVDQRIFGHLSVQGLVASHGRLVPASAIHIAPDPLEDAFDVEATVDALA 167
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
+K+ IKA LLDQ+ +SGIGN ADE L++A +HPL + A +L+ V+
Sbjct: 168 RKRTPIKAALLDQTLVSGIGNIYADEALFRAGVHPLALPARTRRSRLAAVLESATTVMGD 227
Query: 226 ALEVGADSSQFPSNWI 241
AL VG S F S ++
Sbjct: 228 ALAVGGTS--FDSLYV 241
>gi|403379790|ref|ZP_10921847.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus sp. JC66]
Length = 285
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + GK+I K + + F + G++I S R+GK
Sbjct: 1 MPELPEVETVVRTLNQLVSGKRIEKVSVHLPRIIQRPSEPEQFSQVLAGRSIASIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L+ M + ++G R + DE K++ DDG EL
Sbjct: 61 FIRFILND-------LVMVSHLRMEG-------RYGLYSRDEPVEKHTHVIFHFDDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L N + +PP+ +LG + L T+D F L + IK LLL+Q
Sbjct: 107 RYKDVRQFGTMHLFNPGEEWQLPPLHKLGLEPLDPAFTLDAFRAQLRGRSTKIKPLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
I+GIGN ADE L++A IHP +TA SL+++ A+L I +++A+ G S
Sbjct: 167 QRIAGIGNIYADEALFRAGIHPERTAGSLTRQEAASLHTAIVGTLQEAVHAGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R +P ++I I GGR T Y Q
Sbjct: 227 NGQGEMGMFQQRLNVYGRNNQPCPRCT--QEIVKIVLGGRGTHYCSRCQ 273
>gi|147678312|ref|YP_001212527.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum
thermopropionicum SI]
gi|189044668|sp|A5D0T6.1|FPG_PELTS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|146274409|dbj|BAF60158.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum
thermopropionicum SI]
Length = 276
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 144/296 (48%), Gaps = 39/296 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR ++ G KI V+ ++ KVI S+F+ ++ K IL R+
Sbjct: 1 MPELPEVETVRRTLQAKLPGLKITGVEVLLP---KVIRSPELSEFKETIADKKILKVGRR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK L + L + MTG +Y G + P++++ L +G
Sbjct: 58 GKYLLINLSEGYTLAVHLRMTGRLVYCAG--------------QDPPARHTHVIFNLSNG 103
Query: 118 LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D R+F ++ L+ PT + I ELG + L E T + L ++ IK
Sbjct: 104 CQLHFADMRQFGRIWLV--PTDALDGLKGIKELGVEPLEELFTREFLKKELRRRHARIKP 161
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV---- 229
LLLDQ++I+G+GN ADE L++A+I+P + A +L+ A L + I++++++ +E
Sbjct: 162 LLLDQTFIAGLGNIYADEALHRARINPERLATTLTPREIARLYRAIRDLLQEGIENRGTT 221
Query: 230 -------GADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ + ++RE KP G KI GGR++ Y P QK+
Sbjct: 222 VRDFIDGNGQAGNYQEFLQVYNREGKPCPRC--GDKIAKKKVGGRSSYYCPTCQKV 275
>gi|390557794|ref|ZP_10243197.1| Formamidopyrimidine-DNA glycosylase [Nitrolancetus hollandicus Lb]
gi|390174635|emb|CCF82486.1| Formamidopyrimidine-DNA glycosylase [Nitrolancetus hollandicus Lb]
Length = 277
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+++ I + + G+ SDF+ SV G + + R+GK
Sbjct: 1 MPELPEVETIRKSLTA-IQSATITGVVFGTFTGCLAGMEPSDFQQSVTGCRVETIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L S + MTG + + D S + F + L+ EL
Sbjct: 60 YLLLGLSSGDTIAVHLRMTGEL-------------TIVDAGTPLSPHHHFTLTLNCEREL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D R+F ++RL+ DP + + LGP+ L + +T D F L ++ IK LLLDQ
Sbjct: 107 RFRDTRKFGRIRLM-DPEGLAELGRSLGPEPLGKELTPDRFAAMLRNRRRAIKPLLLDQK 165
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+I+GIGN ADE L+ A IHPL+ A SL + LL I++V+ A+E
Sbjct: 166 FIAGIGNIYADEALFAAGIHPLRPADSLDEGEAQGLLDAIRQVLYGAIE 214
>gi|431793586|ref|YP_007220491.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783812|gb|AGA69095.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 273
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ H + + + I ++ F +V G I S R+GK
Sbjct: 1 MPELPEVETIRRSLSLH-VFNQCINEIEVRWPGAVEDYEGRTFAETVKGLRIQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD MTG R + P K++ ++LD G E+
Sbjct: 60 YLLFTLDEGWSFIAHMRMTG-------------RLVYHTQNHEPEKHTHVVLKLDQG-EI 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + ++ LGP+ L E T DE ++ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLNQSSLARLGPEPLEEDFTPDELGKRIAARKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
S ++GIGN ADE L++A I P + A +L+ E +L + I+EV+++ ++ S
Sbjct: 166 SLVAGIGNIYADESLFRAGIAPERCANTLTNEEVESLYRAIREVLQEGIDAKGTSFRDYQ 225
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R + + G+ ++ I GGR+T + QK
Sbjct: 226 DANGNKGNFQKELKVYGRGGEACRCC--GQPLERIRLGGRSTVFCSSCQK 273
>gi|366085719|ref|ZP_09452204.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus zeae KCTC 3804]
Length = 282
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 144/295 (48%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ I K + +I + K+ I+G+ F+ V+G A+ + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LIKSKRITAISTNWAKILINGLPT--FQKDVVGAAVTTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL++ M G Y+ A T + K+ DG +
Sbjct: 58 KYLLIRLNNGETIVSHLRMEGRYYVVSDAHTPF------------DKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL++ SVP +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIHTGQEQSVPALAKLGPEP--TPATFDEAAFAQKLKRHHKAIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++GIGN ADEVL+ ++++PLQ A +L+K+ TL I + ++ A+ G S+
Sbjct: 164 LDQTVVAGIGNIYADEVLWLSRLNPLQPADTLTKKEIHTLHDNIIKELDAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQDALHVYDREGTPCDRC--GTLIVKIKVGQRGTHYCPHCQPLH 276
>gi|365175262|ref|ZP_09362692.1| formamidopyrimidine-DNA glycosylase [Synergistes sp. 3_1_syn1]
gi|363612826|gb|EHL64352.1| formamidopyrimidine-DNA glycosylase [Synergistes sp. 3_1_syn1]
Length = 273
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ + +G +I I +D KV+ SA +F + G+ I+ R+GK
Sbjct: 1 MPELPEVETVKQVLAPQIMGLRIA-DITVNDPKVVARPSAEEFVRELKGERIMELERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ MTG++ + ++P K++ L++G
Sbjct: 60 FLSLCLEGGGRIVLHLRMTGSLLL--------------TPPDFPLEKHTHLIFHLENGRA 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L FTD RRF + L+ + +S LGP+ E + + +L+K+K +K+ LLD
Sbjct: 106 LRFTDMRRFGRFWLIRGGEEDLFSGVSRLGPEPFDEDFSAAYLSSALAKRKSAVKSCLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q +I+GIGN ADE L+ A I P + A LS + C L I+E + + S++
Sbjct: 166 QEFIAGIGNIYADESLFAANIRPERPACGLSGDECERLAAAIREALLTGIAENRMSAEEY 225
Query: 236 -------FPSNWI-FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ S ++ + R +P + V G+++ GGR + Y P+ Q+
Sbjct: 226 LAGKGRGYRSRYLNVYGRAGEPCR--VCGERLLRAVVGGRGSVYCPKCQR 273
>gi|116490733|ref|YP_810277.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni PSU-1]
gi|290890153|ref|ZP_06553235.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429]
gi|419757722|ref|ZP_14284050.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB304]
gi|419857368|ref|ZP_14380077.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB202]
gi|419859113|ref|ZP_14381769.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421184125|ref|ZP_15641551.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB318]
gi|421187666|ref|ZP_15645014.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB419]
gi|421189899|ref|ZP_15647207.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB422]
gi|421191085|ref|ZP_15648368.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB548]
gi|421193897|ref|ZP_15651138.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB553]
gi|421194629|ref|ZP_15651847.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB568]
gi|421196574|ref|ZP_15653757.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB576]
gi|116091458|gb|ABJ56612.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni PSU-1]
gi|290480197|gb|EFD88839.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429]
gi|399905539|gb|EJN92979.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB304]
gi|399967503|gb|EJO01983.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB419]
gi|399967921|gb|EJO02379.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB318]
gi|399971110|gb|EJO05399.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB553]
gi|399971555|gb|EJO05796.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB422]
gi|399973272|gb|EJO07448.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB548]
gi|399976557|gb|EJO10571.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB576]
gi|399977334|gb|EJO11315.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB568]
gi|410497133|gb|EKP88609.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410498111|gb|EKP89572.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB202]
Length = 274
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 31/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++++ +KI K + K++D ++F V+G + R+GK
Sbjct: 1 MPELPEVETVRRGLKKYFENEKI-KDLKIIYPKLLDS-DRTEFIEKVVGSTVSRIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RLD+ M G R +V+ E P K+++ EL++G ++
Sbjct: 59 FLLFRLDNNLTIVSHLRMEG-------------RYSVEAAQEAPHKHTEMIFELENGKQV 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K++L+ N+ V I +GP+ + +T D F + L K K +KALLLD
Sbjct: 106 FYDDTRKFGKMKLVKSGNEAVEVKSIGSMGPEPVESDLTFDYFYNRLQKSKKAVKALLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG------- 230
Q+ ++GIGN ADEVL+ ++I PL+ +S+E L + I + A+E G
Sbjct: 166 QNNVAGIGNIYADEVLWLSEISPLRPTNEISEEEADNLRENIIRELAFAIENGGSTVHSF 225
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ + + R +P + DG ++ I R T Y P+ QK
Sbjct: 226 IDASGHTGRMQDKLHAYGRAGQPCER--DGGELIKIRVAQRGTTYCPKCQK 274
>gi|270308552|ref|YP_003330610.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS]
gi|270154444|gb|ACZ62282.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS]
Length = 270
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I H +GKKI + I A K + ++F V G + R+GK
Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITR-IEALWAKTLCP-PETEFNKLVSGLQVTELSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L F S M+G + +AVK + P ++++ L++G ++
Sbjct: 59 YIIISLSGGLFISVHLKMSGGL------------TAVKAENGQPPRFTRAVFHLENGEQV 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
FTD R+F ++ LL ++ + +LGP+ L E T + + LS++K IKA+LLDQ
Sbjct: 107 YFTDIRKFGRINLLTSLDTI--LEKLGPEPLEEDFTPEVLSKRLSRRKGPIKAVLLDQRV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-GADSSQF 236
++G+GN ADE L++A ++PL+ A SLSK L I+ V+ KA++ GA S +
Sbjct: 165 LAGVGNMYADETLFKACLNPLRPADSLSKAEVINLHSAIRSVLYKAIQNKGASVSTY 221
>gi|397654322|ref|YP_006495005.1| formamidopyrimidine DNA glycosylase [Corynebacterium ulcerans 0102]
gi|393403278|dbj|BAM27770.1| formamidopyrimidine DNA glycosylase [Corynebacterium ulcerans 0102]
Length = 285
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 144/301 (47%), Gaps = 38/301 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E H +GK + ++ V +G A + EA + G+++ S HR+
Sbjct: 1 MPELPEVEVVRRGLECHAVGKTLTSITVSHPRAVRYTEG-GAQEIEARLHGRSLSSVHRR 59
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK LW LD GM+G + IK D P + F+ ++
Sbjct: 60 GKFLWFVLDDSCALMVHLGMSGQMLIKHA-----------DAHSHPHTRIRCFLSDEEAR 108
Query: 119 -ELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F RL + VP P++ + D LLEP+ T L K K + I
Sbjct: 109 GELWFVDQRTFGYWRLAELTYAHNRLVPEPMAHIAAD-LLEPVQDLMATARLIKSKHVEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---- 227
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL+ + V+ KAL
Sbjct: 168 KKLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLSAIHSLLREGQIVMNKALLQGG 227
Query: 228 --------EVGADSSQFPSNWIFHSREKKP-GKAFVDGKKIDFITAGGRTTAYVPELQKL 278
V +S F + + +E +P G+ + F R++ + P+ Q+L
Sbjct: 228 TSFDSLYVNVNGESGYFDVSLHAYGQEGRPCGRCGCAVMREKF---SNRSSHFCPQCQRL 284
Query: 279 N 279
Sbjct: 285 Q 285
>gi|114762146|ref|ZP_01441614.1| formamidopyrimidine-DNA glycosylase [Pelagibaca bermudensis
HTCC2601]
gi|114545170|gb|EAU48173.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. HTCC2601]
Length = 283
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 138/290 (47%), Gaps = 20/290 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G +I ++ + + + + G IL R+ K
Sbjct: 1 MPELPEVETVRRGLAPVMEGNRIAQAQVNRPD--LRWPFPERMAERLTGARILQLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GMTG + + G A+ ++ V D P K+ +++ DG +
Sbjct: 59 YILGDLDSGETLLIHLGMTGRMLVSGDALGRF----VHD-HPAPEKHDHVVLDMADGARV 113
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ T+ P ++ LGP+ L + +L+ + + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMDLMQTATAEAHPLLAALGPEPLGNAFSESHLVAALAGRNMPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN E LY+ IHP + +S++ A+L+ I+EV+E+A+ G S +
Sbjct: 174 KIVAGLGNIYVCEALYRCGIHPGRRVRRISEKRIASLVPVIREVLEEAIAAGGSSLRDFR 233
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE +P + G + + GR++ Y P Q+
Sbjct: 234 QADGELGYFQHSFDVYGREGQPCRTPDCGATVHRMVQSGRSSFYCPRCQR 283
>gi|148656079|ref|YP_001276284.1| formamidopyrimidine-DNA glycosylase [Roseiflexus sp. RS-1]
gi|166198744|sp|A5UUN1.1|FPG_ROSS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|148568189|gb|ABQ90334.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Roseiflexus sp. RS-1]
Length = 273
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 135/288 (46%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ A ++ +G +IV+ D ++++ S +F + G+ + R+ K
Sbjct: 1 MPELPEVQLAADSLGVQIVGARIVRVERLDWTRMVETPSPDEFITLLAGRQVHGWGRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + M+G++ V+ D P K++ + LDDG ++
Sbjct: 61 WILLFLDGGWTLALHLRMSGSL-------------TVQPADAPPDKHTHLVLRLDDGRQV 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + RLL+ + G + L TV+ + L +K IK LLLDQ+
Sbjct: 108 FFRDPRKFGRARLLDADGRAALDAAHGDEPLSNAFTVERLAELLRGRKRAIKPLLLDQAV 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN- 239
I+GIGN ADE L++A+IHPL+ A LS + A L I+ + +AL G + + N
Sbjct: 168 IAGIGNIYADEALWRARIHPLRPASDLSADEVAALHDGIRAALRQALTNGGSTLRDYRNS 227
Query: 240 ----------WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ + RE +P G I R T Y PE Q+
Sbjct: 228 YGTRGTNQDHFNAYDREGQPCPRC--GATIIKTVVAQRGTHYCPECQR 273
>gi|170016692|ref|YP_001727611.1| formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20]
gi|414596599|ref|ZP_11446173.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE E16]
gi|421879706|ref|ZP_16311166.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE C11]
gi|169803549|gb|ACA82167.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20]
gi|390446415|emb|CCF27286.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE C11]
gi|390482620|emb|CCF28234.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE E16]
Length = 280
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 139/297 (46%), Gaps = 45/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +++ IG IV K I D N I GV + F A
Sbjct: 1 MPELPEVETVRRGLKKLIIGGHIVQVKLPYPKVISGDSNAFITGVMNASFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVEPREATPHKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D + + D RRF ++ L ++ VP +++LGP+ + +++D + +K K
Sbjct: 99 LSDNRAVFYNDTRRFGRMVLATTGHEKIDVPSLAKLGPEPTADDLSLDYMVTAFAKSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-- 228
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP SLS+ A L + I + + +A++
Sbjct: 159 VKSFLLDQNQIAGIGNIYADEVLWQSKIHPETPTNSLSRTVLAVLRQNIIDEMARAIKHH 218
Query: 229 ---------VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V + QF + + R +P G + I G R T + P Q
Sbjct: 219 GTTVHSFSNVFGEVGQFQNELQAYGRVGQP--CLRCGTIMSKIKVGQRGTTFCPFCQ 273
>gi|326693336|ref|ZP_08230341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc argentinum KCTC 3773]
Length = 280
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 136/297 (45%), Gaps = 45/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ IG +I K I D I GV + F A
Sbjct: 1 MPELPEVETVRRGLEKLIIGSQITQVKLPYPKVITGDSQAFITGVRNAYFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ D P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVEPIDATPHKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D L + D RRF ++ L + +VP + +LGP+ + +T+ + ++ K
Sbjct: 99 LADDRVLFYNDTRRFGRMVLATTNQETLAVPALGKLGPEPTAQDLTLADMVAKFARSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-- 228
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP A LS+ ATL + I + +A+E
Sbjct: 159 VKSFLLDQTQIAGIGNIYADEVLWQSKIHPETPANLLSEMQLATLRQNIISEMARAIEHH 218
Query: 229 ---------VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V + QF + + R +P G + I G R T + P Q
Sbjct: 219 GTTVHSFSNVFGEVGQFQNELQAYGRVDQP--CLRCGTPLVKIKVGQRGTTFCPVCQ 273
>gi|260574420|ref|ZP_05842424.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2]
gi|259023316|gb|EEW26608.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2]
Length = 283
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 20/290 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ IV + + + + + A + G +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPVMAGQTIVAAQV--NRPDLRWPFPPNMAARLTGARVLGLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S GM+G + + G + Q+ + P+K+ ++++ G +
Sbjct: 59 YLLADLSSGETLLIHLGMSGRMLVSGAMLGQFHHA-----HPAPAKHDHVVLDMESGARV 113
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ + S P ++ LGP+ L +L + IK+ LLDQ
Sbjct: 114 TFNDARRFGAMDLMATDGAESHPLLASLGPEPLGNAFDESVLAAALKNRNTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN EVL++A+++P A SL+ E A+L+ I++V+ +A+E G S +
Sbjct: 174 HVVAGLGNIYVCEVLFRARLNPAAKAGSLTPEQTASLVPIIRQVLSEAIEAGGSSLRDYR 233
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE +P I+ + GR++ Y P Q+
Sbjct: 234 QTDGELGYFQHRFHVYDREGQPCATPGCPGHIERMVQSGRSSFYCPVCQR 283
>gi|402573281|ref|YP_006622624.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus meridiei
DSM 13257]
gi|402254478|gb|AFQ44753.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus meridiei
DSM 13257]
Length = 273
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 138/290 (47%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H G KI + + + VI FE V + I R+GK
Sbjct: 1 MPELPEVETIRRTLAQHVNGLKIKEVKLVWSSAVISW-EDQPFEVLVADRQIQRIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RLD+ MTG R + P K++ LD G E+
Sbjct: 60 YLLIRLDNDLTLIAHMRMTG-------------RLNYYTEKQPPDKHTHVVFCLDKG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F+D R+F +++ + S+ + +LGP+ L T + KKK+++KA LLDQ
Sbjct: 106 HFSDVRKFGRIQAIPTSRSISDSSLGKLGPEPLELEFTPQVLKERFGKKKVSVKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN DE L+QA+I P +T SL++E A L + I+ V++ ++ S +
Sbjct: 166 HVLAGLGNIYVDESLFQARISPNRTVDSLTEEELAELHQAIRNVLQAGIDAQGTSFRDYR 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R +P K V G+K++ + GRTT Y + QK
Sbjct: 226 DANGEKGSFERALQVYGRGGEPCK--VCGQKLERVRLAGRTTVYCSQCQK 273
>gi|288553688|ref|YP_003425623.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus pseudofirmus OF4]
gi|120474|sp|P19210.3|FPG_BACFI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|39475|emb|CAA37877.1| unnamed protein product [Bacillus firmus]
gi|288544848|gb|ADC48731.1| formamidopyrimidine-DNA glycosylase [Bacillus pseudofirmus OF4]
Length = 274
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 127/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + E IGK I + N + + +FE ++ + I S R+GK
Sbjct: 1 MPELPEVETVKRTLTELVIGKTIAGITVKWANIIKEPADVLEFETLLMNQTIRSIRRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D M + ++G R + + +E ++ DG EL
Sbjct: 61 FLLFEFDD-------IVMVSHLRMEG-------RYGLYEKEEPLPPHTHVIFHFTDGEEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L V P++ LG + E T + ++ K IK LLDQ
Sbjct: 107 RYQDVRKFGTMHLFPKGSEEKVLPLAHLGVEPFSEQFTSELLMNAFQKTNRKIKVALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP + A SLSKE A L K I +E+A+E+G S
Sbjct: 167 KTVVGLGNIYVDEALFRARIHPERLAHSLSKEEMAVLHKAIVSTLEEAVEMGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R+ +P + G I GGR T + P Q
Sbjct: 227 NGQGEMGMFQQKLGVYGRKNEPCRQ--CGTDILKTVVGGRGTHFCPNCQ 273
>gi|377809858|ref|YP_005005079.1| formamidopyrimidine-DNA glycosylase [Pediococcus claussenii ATCC
BAA-344]
gi|361056599|gb|AEV95403.1| formamidopyrimidine-DNA glycosylase [Pediococcus claussenii ATCC
BAA-344]
Length = 279
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 137/291 (47%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E GK I + + D V + +F++++ GK IL R+GK
Sbjct: 1 MPELPEVETVRRGLEALVKGKTIKQVNVRYDKMV--SPNPDEFKSALKGKKILDIERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G + AV E SK+ EL DG +L
Sbjct: 59 YLIFRF------SENLSMVSHLRMEG-------KYAVLPHTEPLSKHDHVIFELTDGSDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ +V ++ +GP+ E +T + + L KK+ +K+ LL+Q
Sbjct: 106 RYNDTRKFGRMNLVPSGKELTVGGLATIGPEPTPETLTFEYLSQRLRSKKVGMKSFLLNQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA-----------L 227
S ++G+GN DEVL+ K+HPLQ + +L+ E L I +E+A L
Sbjct: 166 SNVAGLGNIYVDEVLWLTKVHPLQPSNTLTDEEIKALRLNIFSELERAINAHGTTVFSYL 225
Query: 228 EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ F + + R+ KP G I+ I R T + P QKL
Sbjct: 226 NAAGHAGSFQNQLNVYHRQGKPCPRC--GTLIEKIKVAQRGTHFCPHCQKL 274
>gi|160914227|ref|ZP_02076448.1| hypothetical protein EUBDOL_00237 [Eubacterium dolichum DSM 3991]
gi|158433854|gb|EDP12143.1| DNA-formamidopyrimidine glycosylase [Eubacterium dolichum DSM 3991]
Length = 275
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 129/292 (44%), Gaps = 34/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E +I+ + DN I + F ++ K I HR GK
Sbjct: 1 MPELPEVETVVRTLEHQLQQIEIMDCRVLWDN--IIAMDTQAFIETIRHKKIQGYHRHGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S F M G Y++ E K++ L DG EL
Sbjct: 59 YLMFDLGSYDF-IVHLRMEGKFYVQA-------------PQEPYDKHTHVIFSLSDGREL 104
Query: 121 SFTDKRRFAKVRL---LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K+ L L + P + +GPDA E + D L KKK +KA+LLD
Sbjct: 105 RYHDTRKFGKMVLYPKLENYQEYPCFAHIGPDAFDEELCADSLYRMLHKKKTYLKAVLLD 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
QS ++GIGN ADE+ Y ++HP L K+ A L+ + ++ A+ G +
Sbjct: 165 QSVMAGIGNIYADEICYAMRMHPETKISHLRKKDFAVLITETRRILSGAIRAGGTTIRSY 224
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGK-KIDFITAGGRTTAYVPELQK 277
+F H+R+ G+A + + +I IT GR T Y P QK
Sbjct: 225 TSSLGVDGRFQLKLKVHARK---GEACPNCQGEIKKITVAGRGTYYCPTCQK 273
>gi|89894087|ref|YP_517574.1| hypothetical protein DSY1341 [Desulfitobacterium hafniense Y51]
gi|219668498|ref|YP_002458933.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense
DCB-2]
gi|423076844|ref|ZP_17065552.1| DNA-formamidopyrimidine glycosylase [Desulfitobacterium hafniense
DP7]
gi|122483280|sp|Q24XW2.1|FPG_DESHY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|254789434|sp|B8FU83.1|FPG_DESHD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|89333535|dbj|BAE83130.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538758|gb|ACL20497.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense
DCB-2]
gi|361852021|gb|EHL04306.1| DNA-formamidopyrimidine glycosylase [Desulfitobacterium hafniense
DP7]
Length = 273
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ +H + ++I + I+ ++G F +V G S R+GK
Sbjct: 1 MPELPEVETIRRSLSQHILERRI-EEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ G +I + +T R + P K++ ++L G E+
Sbjct: 60 YLLFTLEE-----------GWSFIAHMRMT--GRMVYHAQSQEPEKHTHVVLKLSSG-EI 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + P ++ LGP+ L E + E L+ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++GIGN ADE L++A I P + A SL+KE L I +V+E+ + S +
Sbjct: 166 TLVAGIGNIYADEALFRAGIAPERCANSLTKEEIEKLYPAICQVLEEGIAANGTSFRDYQ 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R +P K G + I GR+T + P Q
Sbjct: 226 DANGERGDFQKELKVYGRGGEPCKEC--GHTLVRIRLAGRSTVFCPCCQ 272
>gi|88606811|ref|YP_505015.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ]
gi|88597874|gb|ABD43344.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ]
Length = 268
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 27/286 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ + IG++I + + + A DFE V G+ I S +R K
Sbjct: 1 MPELPEVEVIARSLADKIIGQRIRDVEVKRRDLRVR--IADDFEQLVTGREICSVYRVAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++LDS F GM+G I Y + V P K+ + G L
Sbjct: 59 YLVMQLDSGAKLVFHMGMSGRIL--------YMHAPV------PEKHDCVVFAMQHGYSL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D RRF V LL+ + ++GPD E D + K +I K++L++ +
Sbjct: 105 VFNDTRRFGLVTLLDGEGYRSLLEKMGPDPFSEAFNADCLLNMHGKARI--KSVLMNSAV 162
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---SQFP 237
+ GIGN A E+L+ A I P + +LS+E C +++ +EV++ A+ G S + P
Sbjct: 163 VVGIGNIYASEILFTAAILPHREVSTLSREECCRIVESTREVLKLAIATGGSSIRDYRTP 222
Query: 238 S----NWIFHSRE--KKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ N+ H R +K K + G +I GGR+T + QK
Sbjct: 223 TGDVGNFSKHFRVYGRKGEKCYTCGGEIQVEKQGGRSTFFCRHCQK 268
>gi|410657557|ref|YP_006909928.1| Formamidopyrimidine-DNA glycosylase [Dehalobacter sp. DCA]
gi|410660592|ref|YP_006912963.1| Formamidopyrimidine-DNA glycosylase [Dehalobacter sp. CF]
gi|409019912|gb|AFV01943.1| Formamidopyrimidine-DNA glycosylase [Dehalobacter sp. DCA]
gi|409022948|gb|AFV04978.1| Formamidopyrimidine-DNA glycosylase [Dehalobacter sp. CF]
Length = 273
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 40/295 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-----IDGVSASDFEASVLGKAILSA 55
MPELPEVE+ R ++ +GK I +D +V ++ DF A V + I S
Sbjct: 1 MPELPEVESIRLSLAARILGKTI------EDVEVRWLPAAVSLADEDFSALVRNRTIESL 54
Query: 56 HRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R+GK L + L F MTG R P K++ LD
Sbjct: 55 DRRGKYLLMNLSHGLTMIIHFRMTG-------------RLIYYPEQHEPDKHTHVVFRLD 101
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
G EL ++D R+F +++L++ + +++LGP+ L E D+ L++KK TIKA
Sbjct: 102 QG-ELHYSDIRKFGRIQLVSFKMAFKAACLAKLGPEPLDESFAFDQLGMRLARKKSTIKA 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ ++GIGN ADE L++A I P + SL L I EV+++ + G S
Sbjct: 161 ALLDQTVVAGIGNIYADEALFRAGILPDRNTASLKVSEIILLYDAICEVLQEGITAGGTS 220
Query: 234 SQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ F N + + R + K G ++ I GRTT Y P QK
Sbjct: 221 FRDYRDADGKKGAFQENLMVYGRSGQECK--YCGGQLAKIKVAGRTTVYCPNCQK 273
>gi|152964122|ref|YP_001359906.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus
radiotolerans SRS30216]
gi|151358639|gb|ABS01642.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus
radiotolerans SRS30216]
Length = 273
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 42/291 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV++AR+ +E + + I + D + D +++G+ + +AHR+GK
Sbjct: 1 MPELPEVQSARQVVERGGLFRTIA-DVDDRDTYACRPHAPGDLRRALVGRTLTAAHRRGK 59
Query: 61 NLWLRL-----DSPPFPSFQFGMTGAIYIKGVAVTQY---------KRSAVKDTDEWPSK 106
++W D P GM+G I++ + S +EW
Sbjct: 60 SMWCDTSGRDGDEGPALGIHLGMSGRIFVSSAGGADLLVGGDYAGPRESPNPVKEEW--- 116
Query: 107 YSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSK 166
+F ++ +DG +L DKRR +VRL P + LGPDA E + +EF + + +
Sbjct: 117 -YRFTLDFEDGGQLRLFDKRRLGRVRL------DPDVDALGPDA--ELVGREEFRERIGR 167
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
+KA LLDQS ++GIGN +ADEVL++A+ PL+ A L E L + ++ I A
Sbjct: 168 GSAPLKARLLDQSVVAGIGNLLADEVLWRARASPLKPAGELRAEELDELRRELRAAIRHA 227
Query: 227 LEVGADSSQFPSNWIFHSREKKP-----GKAFVDGKKIDFITAGGRTTAYV 272
+ G H+ E P G G ++ T GGRTT +
Sbjct: 228 VRHGG----------VHTGEVVPHRTAGGHCPRCGAEMVRATVGGRTTWWC 268
>gi|298242821|ref|ZP_06966628.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM
44963]
gi|297555875|gb|EFH89739.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM
44963]
Length = 308
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 138/307 (44%), Gaps = 29/307 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ +G I ++ + + ++I DF A + G+ I R+GK
Sbjct: 1 MPELPEVEYTARQLQASIVGATIREAQVFWE-RIIAHPLPEDFCAQISGRTIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-------------- 106
L L L MTG + T +D W ++
Sbjct: 60 FLLLDLSGEGLLIIHRRMTGNFLLLEPGWTLDTSLRERDAQAWSTRGPSFTLETDGSQAY 119
Query: 107 -----YSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFT 161
Y + L+DG L FTD+R+F +V L + LGP+ L E ++
Sbjct: 120 SSEMNYCRVCFILEDGRNLLFTDQRKFGRVSLWQRSQEEEVLRGLGPEPLSEAFNIEGLA 179
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
+L+ ++ IK +LLDQ+ I+G+GN ADE L+ A+IHP + A SL+ + A+L + +
Sbjct: 180 QALAHRRSPIKQVLLDQTVIAGVGNIYADEALFHARIHPRRAANSLTSQEIASLHEAVVS 239
Query: 222 VIEKALEVGADS-SQFPSNW------IFHSR-EKKPGKAFVD-GKKIDFITAGGRTTAYV 272
V+ KA+E G S S + W H K+ GK G I+ I R+T +
Sbjct: 240 VLLKAIEHGGTSFSSYRDLWGEAGDNYNHVHVYKQAGKPCTRCGTLIERIVVAQRSTHFC 299
Query: 273 PELQKLN 279
P Q L
Sbjct: 300 PVCQVLT 306
>gi|158312992|ref|YP_001505500.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec]
gi|229541073|sp|A8L594.1|FPG_FRASN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|158108397|gb|ABW10594.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec]
Length = 291
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 18/241 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E +G+ + + + V ++ +D F AS++G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLERGVVGRTVAEVEVHHLRAVRRHLAGADHFAASLVGQTVATARRRG 60
Query: 60 KNLWLRL--DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL L P P+ + G + + G Q D+ + F D+G
Sbjct: 61 KYLWLGLTPSEPGGPAVGDALLGHLGMSG----QLLVVPADSPDQVHLRVRFRFT--DEG 114
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVD----EFTDSLSKKKITIK 172
EL F D+R F + +++ +P PI+ + PD P++VD F D+L +++ +K
Sbjct: 115 RELRFVDQRTFGGLAVVSGGAELPAPIAHIAPD----PLSVDFDPERFADALRRRRTGLK 170
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LLDQ+ ISG+GN ADE L+ A++H + ++++ LL ++ V+ AL G
Sbjct: 171 RALLDQTLISGVGNIYADEGLWAARLHYARPTETVTRAEALRLLDAVRTVMTAALAAGGT 230
Query: 233 S 233
S
Sbjct: 231 S 231
>gi|407647466|ref|YP_006811225.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Nocardia brasiliensis ATCC 700358]
gi|407310350|gb|AFU04251.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Nocardia brasiliensis ATCC 700358]
Length = 286
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 117/242 (48%), Gaps = 24/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR I EH +G+ I I V ++G A+D A + G + SA R
Sbjct: 1 MPELPEVEVVRRGIAEHVVGRVIDSVAITHPRSVRRHLEG--AADLAARLAGLKVQSAER 58
Query: 58 KGKNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
+GK LWL D P GM+G + V+ D K++ L D
Sbjct: 59 RGKFLWLTFDEPDTSLVVHLGMSGQML-------------VQPADAPLEKHAHIRATLHD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G +L F D+R F L D T VP P++ + D L V+ ++ K+ I
Sbjct: 106 GTQLRFVDQRTFGGWALAPLVEVDGTLVPEPVAHIARDPLDPRFDVESVVRAIRAKQTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K +LLDQS ISGIGN ADE L++AK+H + A LS+ LL + V+ +AL G
Sbjct: 166 KRVLLDQSVISGIGNIYADESLWRAKLHGTRLASGLSRPVLRGLLADVGAVMGEALAAGG 225
Query: 232 DS 233
S
Sbjct: 226 TS 227
>gi|417999445|ref|ZP_12639654.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei T71499]
gi|410539076|gb|EKQ13614.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei T71499]
Length = 282
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ VP +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEP--TPRTFDETEFARRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|374710135|ref|ZP_09714569.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Sporolactobacillus inulinus CASD]
Length = 279
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 33/291 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE +R + + +GK VK + K+I + F+ +++G+ I R+G
Sbjct: 1 MPELPEVETVKRTLSQLVLGKT-VKEVEVRWPKIIRRPDDLNQFKHALIGQTIHDIKRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGL 118
K L D F + + ++G +Y+ D + P+ KY+ D
Sbjct: 60 KFLLFCFDD-------FVLVSHLRMEG----RYRL----DPEHAPTDKYTHVIFHFTDDT 104
Query: 119 ELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R+F + L N + PP+++LGP+ L + +TVD T + S+ +IK +LL
Sbjct: 105 ALRYRDVRKFGTMHLFNKGEEWQHPPLAKLGPEPLSKALTVDYLTTAFSRTSRSIKQVLL 164
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
DQ+ + G+GN DE L++A IHPL A SLS E L + + + KA+ +G + +
Sbjct: 165 DQTVVVGLGNIYVDESLFKAGIHPLTPASSLSAEQLEQLHHAVVDTLTKAVTLGGSTIRT 224
Query: 236 ----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R+ +P G I+ I GGR T Y P Q
Sbjct: 225 FVNSQGHMGFFQQELAVYGRKGEP--CVRCGTAIEKIKVGGRGTHYCPICQ 273
>gi|407718772|ref|YP_006796177.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc carnosum JB16]
gi|407242528|gb|AFT82178.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc carnosum JB16]
Length = 277
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 139/290 (47%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IG +I K I KVI G S + F VL + R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGARITKVTIPYP-KVITGDSQA-FTTGVLNAQFTAIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL + Q + + ++G QY +V+ D P K+++ ELD L
Sbjct: 59 YLLLRLSN------QHTIVSHLRMEG----QY---SVEPIDAAPRKHTEIIFELDGQRVL 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L ++ P +++LG + E +T+ S+ K +K+ LLD
Sbjct: 106 FYNDTRRFGRMVLTTTGHESIEAPSLAKLGKEPTEESLTLAYMVAVFSRSKKPVKSFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---------- 227
Q+ I+GIGN ADEVL+Q+KIHP A LS+ A L K I + +A+
Sbjct: 166 QNQIAGIGNIYADEVLWQSKIHPETPANQLSEVELAILRKNIILEMARAIAHHGTTVHSF 225
Query: 228 -EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ + QF + + R +P G + I G R T + P Q
Sbjct: 226 SNIFGEVGQFQNELEAYGRVNQP--CLRCGATMVKIKVGQRGTTFCPVCQ 273
>gi|297565906|ref|YP_003684878.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946]
gi|296850355|gb|ADH63370.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946]
Length = 274
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 43/301 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E + +G+ I K +D + A G+ +L R+GK
Sbjct: 1 MPELPEVETTRRILEPYLLGQTIQKLSHSDPTRYRHTELAH-------GRKVLGTTRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +L+ GMTG P +++ VEL G L
Sbjct: 54 YMLWQLEGGLEAIIHLGMTGGFRFT------------------PHTHTRLTVELP-GRTL 94
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD RRF K ++ + + + +GP+ L + T+ +F L+ + IK +LL Q
Sbjct: 95 YYTDPRRFGKWWVVEAGNYREIDLLGRIGPEPLSQEFTLPQFQRVLAGTRRRIKEVLLGQ 154
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA-----DS 233
++GIGN ADE L+Q++IHP + A +L L K I++V+ +A+E G +S
Sbjct: 155 EAVAGIGNIYADESLWQSRIHPERPANTLKPAEVKRLYKAIRDVMGRAVEAGGSTLSDNS 214
Query: 234 SQFPSN----WIF-HSREKKPGKAF----VDGKKIDFITAGGRTTAYVPELQKLNGVQAA 284
Q P+ + F H+ +PG+ G KI I GGR T + P Q+L G+ A
Sbjct: 215 YQQPTGESGYFQFEHNAYGRPGQRCKRPGCTG-KIARIVVGGRGTHFCPNCQRLAGLSRA 273
Query: 285 K 285
K
Sbjct: 274 K 274
>gi|417989987|ref|ZP_12630481.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei A2-362]
gi|410536419|gb|EKQ11013.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei A2-362]
Length = 282
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ VP +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEP--TPRTFDETEFARRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 164 LDQTVVTGMGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|339448455|ref|ZP_08652011.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus fructivorans KCTC 3543]
Length = 280
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 28/292 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G IV S+ A K+++ + A +FE + GK IL R+GK
Sbjct: 1 MPELPEVETIRRGLTNLVQGTTIV-SVDALYPKMLN-MPAKEFENMLAGKEILQIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL S + + + ++G K V + E K++ L+D EL
Sbjct: 59 YLLIRL------SDDYTLVSHLRMEG------KYDVVPEGTE-NQKHTYVVFHLNDEREL 105
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F K+ L+ D + ++++GP+ E +T D L K IKA LLDQ
Sbjct: 106 RYNDTRKFGKMNLVKDSQVYDLSGLNKIGPEPTEEDLTFDYLKKQLHKSHRKIKAFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S I+GIGN ADE L+ +KIHP Q LS + TL K I + I+ A++ G ++ F
Sbjct: 166 SNIAGIGNIYADETLWLSKIHPEQATNYLSDQEIETLRKNIIKEIQLAIK-GHGTTVFTY 224
Query: 239 NWIFHSREKKPGKAFVDGKK----------IDFITAGGRTTAYVPELQKLNG 280
F V GKK I+ I R T++ P Q+++G
Sbjct: 225 KNAFGEEGSFQNHLHVYGKKGQPCERCGTPIEKIKVAQRGTSFCPYCQRVHG 276
>gi|117928780|ref|YP_873331.1| formamidopyrimidine-DNA glycosylase [Acidothermus cellulolyticus
11B]
gi|166215603|sp|A0LV85.1|FPG_ACIC1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|117649243|gb|ABK53345.1| DNA-(apurinic or apyrimidinic site) lyase [Acidothermus
cellulolyticus 11B]
Length = 284
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G++I + + V A+DF ++G+ I + R+G
Sbjct: 1 MPELPEVETIRRGLARHLVGRRIGYAEVFHPRAVRRHSGGAADFTGRLIGRRIQAVLRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LDS GM+G + A P F D E
Sbjct: 61 KYLWFALDSDLALLAHLGMSGQFLLADAASPS------------PKHLRARFAFTDGDPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + L VP IS + PD L EF ++++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLTLAPLIADVPASISHIAPDILDVAFDEAEFHRRFTQRRTGVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ ISG+GN ADE L++A++H V +S +C LL ++ V AL G S
Sbjct: 169 TLISGVGNIYADEALWRARLHYATPTVDISAATCRRLLAALRAVFRAALRAGGTS 223
>gi|375088806|ref|ZP_09735144.1| formamidopyrimidine-DNA glycosylase [Dolosigranulum pigrum ATCC
51524]
gi|374561771|gb|EHR33110.1| formamidopyrimidine-DNA glycosylase [Dolosigranulum pigrum ATCC
51524]
Length = 277
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 142/294 (48%), Gaps = 32/294 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEA +R +++ +GK+ V +I +K+I F+ S++G+ R+GK
Sbjct: 1 MPELPEVEAVKRGLDQSIVGKR-VTAIEVMWSKIIRHDDIEAFKQSLIGQVCQRIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D+ S M G ++ D ++ K++ +ELD+ EL
Sbjct: 60 FLLIYFDTHVLLS-HLRMEGKYFLC-------------DKEQPVHKHTHVILELDEQEEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPD---ALLEPMTVDEFTDSLSKKKITIKALL 175
+ D R+F ++ LL P +++LGP+ A P + E+ LS + IK +L
Sbjct: 106 RYHDVRKFGRMELLEIGQEFQHPSLTKLGPEPMPATFSPHVIKEY---LSGRTTAIKNIL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ ++GIGN ADE+L+ A +HP +A ++ E L I +++ A++ G + +
Sbjct: 163 LDQRMVAGIGNIYADEILFDAYVHPEMSAAEITDEEIQQLYYSIISIMQAAIKAGGSTIR 222
Query: 236 FPSNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQKLNG 280
+N +H K G++ G I+ GGR T + P Q+ G
Sbjct: 223 SYTNMFGEAGHYQAYHQVYGKDGESCSRCGTIIEKTKVGGRGTHFCPNCQRKRG 276
>gi|379710092|ref|YP_005265297.1| formamidopyrimidine-DNA glycosylase [Nocardia cyriacigeorgica
GUH-2]
gi|374847591|emb|CCF64661.1| formamidopyrimidine-DNA glycosylase [Nocardia cyriacigeorgica
GUH-2]
Length = 288
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 116/242 (47%), Gaps = 24/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR + +H +G I +A V ++G A+D A + G + +A R
Sbjct: 1 MPELPEVEVVRRGLADHVVGHVIESVAVAHPRSVRRHLEG--AADLAARLSGLRVTAAER 58
Query: 58 KGKNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
+GK LWL D P GM+G + I+ K + ++ T LD+
Sbjct: 59 RGKYLWLTFDDPDLALVVHLGMSGQMLIRPAEAPVEKHAHIRAT-------------LDN 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G EL F D+R F L D T VP P++ + D L + ++ K I
Sbjct: 106 GAELRFVDQRTFGGWALAELVEVDGTRVPEPVAHIARDPLDPRFDPEAVVAAIRAKNTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K +LLDQ+ ISG+GN ADE L++AK+H + A LS+ TLL V+ AL G
Sbjct: 166 KRVLLDQTVISGVGNIYADEALWRAKLHGCRIASGLSRPVLHTLLADAAAVMRDALAAGG 225
Query: 232 DS 233
S
Sbjct: 226 TS 227
>gi|392989395|ref|YP_006487988.1| formamidopyrimidine-DNA glycosylase [Enterococcus hirae ATCC 9790]
gi|392336815|gb|AFM71097.1| formamidopyrimidine-DNA glycosylase [Enterococcus hirae ATCC 9790]
Length = 278
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 123/235 (52%), Gaps = 17/235 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + +GKKI K I ++I+ + FEAS++G+ ILS R+GK
Sbjct: 1 MPELPEVETVRKGLSRLVVGKKIQK-IQVLWPRIIEQPETAIFEASLVGEEILSIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL + + + ++G + + +E K++ +DG +L
Sbjct: 60 FLIFRLS-------HYELISHLRMEG-------KYQFVEKNEPIDKHTHVIFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ TS I +LGP+ L + +D F L K IK LLLDQ
Sbjct: 106 RYHDVRKFGRMTLVEKGTSDAYKGIMKLGPEPLPDTFLLDGFRLGLQKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
++G+GN DE L++AKIHP Q A +L + L K I +V+ +A+E G +
Sbjct: 166 KLVTGLGNIYVDEALWEAKIHPEQPADTLKPKEAELLRKAIIDVLSRAIEAGGTT 220
>gi|357633255|ref|ZP_09131133.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B]
gi|357581809|gb|EHJ47142.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B]
Length = 289
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 138/312 (44%), Gaps = 58/312 (18%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSA-HRKG 59
MPELPEVE RA+ +G+ +V I A D KV+ A ++A R+
Sbjct: 1 MPELPEVETIARALAPGLVGRVVV-GIEAPDRKVLAAPKTRAAWARAAAGRTVTAVSRRA 59
Query: 60 KNLWLRLDSPPFP----------------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEW 103
K L + L P P +F MTG +I TD
Sbjct: 60 KLLLVHLGPAPAPGSLPGAPDLDEDTLLFAFHLKMTGRFHIA-------------PTDAP 106
Query: 104 PSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEP--MTVD 158
P Y++ V LDDG L F+D RRF RLL P ++ P + LGP EP MT +
Sbjct: 107 PPAYARLLVRLDDGQSLVFSDMRRFGTARLLT-PQALSDWPFYATLGP----EPWDMTPE 161
Query: 159 EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC 218
F +LS++ IKA+LLDQ+ ++GIGN ADE L+ A I P A SLS LL
Sbjct: 162 AFEAALSRRTTRIKAVLLDQTVMAGIGNIYADESLFAAGIRPDTPAKSLSAGQRQKLLAA 221
Query: 219 IKEVIEKALEVGADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITA--G 265
++ VI +A+ G + + F + + + +P G + + A
Sbjct: 222 VQAVIGRAIAAGGSTIRDYRTPDGVEGGFQHQFTVYGKAGEP----CPGCRAVLVAAKVA 277
Query: 266 GRTTAYVPELQK 277
GRT+ + P QK
Sbjct: 278 GRTSTFCPHCQK 289
>gi|406837657|ref|ZP_11097251.1| formamidopyrimidine-DNA glycosylase [Lactobacillus vini DSM 20605]
Length = 276
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +G++I +I K+I G S ++F ++ K +LS R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVVGQRIT-AIDIRYPKIIIG-SPAEFCQALHNKKLLSIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D M + ++G + ++ +D+ K++ +L G +L
Sbjct: 59 FLLFNFDQ------NLTMVSHLRMEG-------KYFIRRSDQPIEKHTHIIFQLASGQQL 105
Query: 121 SFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L + ++P +S+LGP+ L + +FT L K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLAKTDQVQNLPNLSKLGPEPLSTDFKLTDFTRKLLHCKKAIKPALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ + G+GN DEVL+ ++IHPL + L+ + A L + I + + A++ G + + S
Sbjct: 166 TIVVGLGNIYVDEVLWLSQIHPLTSCYELTAKQAADLFQNIIQELTAAVKAGGTTVRTYS 225
Query: 239 NWIFHS-----------REKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ HS +E +P + G KI I R T + P+ Q+
Sbjct: 226 DAFEHSGKFQFALHVYGKEGQPCQR--CGTKIQKIRVAQRGTHFCPQCQQ 273
>gi|301066753|ref|YP_003788776.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei str.
Zhang]
gi|300439160|gb|ADK18926.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei str.
Zhang]
Length = 282
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDASTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ VP +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEP--TPRTFDETEFARRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQNALHVYDREDTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|418008307|ref|ZP_12648174.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UW4]
gi|410546985|gb|EKQ21228.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UW4]
Length = 282
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ VP +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEP--TPSTFDETEFARRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSQLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|406957988|gb|EKD85792.1| Formamidopyrimidine-DNA glycosylase [uncultured bacterium]
Length = 288
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 147/294 (50%), Gaps = 23/294 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + ++ +G KI+ D N + + D +++G + R GK
Sbjct: 1 MPELPEVETIRLGLSKYLVGHKIL-----DVNVKLKRIFTGD-PKNIIGAKVEKIERFGK 54
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT--DEWPSKYSKFFVELDDGL 118
L + L++ + +TG I +A + + + + + P+K++ +LD +
Sbjct: 55 GLVINLNNSYCIAIHIKLTGQIIYSDLAFVRNRNIHLSQSKVGQLPNKFTHVIFDLDKQV 114
Query: 119 ELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLE----PMTVDEFTDSLSKKKITIK 172
+L + D R+F ++++ +D ++ +LGP+ + P+T+++F LSK +++K
Sbjct: 115 KLYYNDIRQFGWIKIVKKDDLKTLQFFKDLGPEPIPSSGQPPLTLEQFKKILSKSGLSVK 174
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
L++DQ I G+GN A++ L+ A I P + A ++K L + I EV++K L+ G
Sbjct: 175 VLIMDQKRIGGVGNIYANDALFLAGIDPRRKAKDITKNEVKKLFEAILEVLQKGLKYGGA 234
Query: 233 SSQFPSNWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S N I F + KK K + G I+ I GGR T + P+ QK
Sbjct: 235 SELTFVNAIGQEGEYQNHFLAYGKKGQKCSICGGLIEKIFLGGRGTFFCPKHQK 288
>gi|88813702|ref|ZP_01128929.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231]
gi|88789056|gb|EAR20196.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231]
Length = 272
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 130/288 (45%), Gaps = 29/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR IE H G++I K II D + A + + I+ R+ K
Sbjct: 1 MPELPEVETTRRGIEPHVRGRRIAKIIIRDAR--LRWPIAENLPRQAEDRRIIGIQRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL++ GM+G++ + A +D P ++ + L G L
Sbjct: 59 YLLFRLEADATLILHLGMSGSL----------RLVAAQDP---PLAHAHLDIILASGQAL 105
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+TD RRF + DP ++ LGP+ L D ++I KALL+D
Sbjct: 106 RYTDPRRFGSLHWCTGDPAQHHLLASLGPEPLSSAFHADYLYGLSRGRRICAKALLMDSR 165
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA-------D 232
+ GIGN A+E LY+A I P+++A + + A L++ +K V+ +A+E G D
Sbjct: 166 AVVGIGNIYANEALYRAAIRPMRSAGCIGRNRYARLVQAVKSVLAEAIEAGGTTLRDFTD 225
Query: 233 SSQFPSNWIFHSREKKPGKAFVDGKKIDFIT----AGGRTTAYVPELQ 276
S+ P FH R + G+ ++ I G R T Y P Q
Sbjct: 226 STGQPGY--FHRRLEVYGRGGAACQRCAGIIRMERLGQRATYYCPGCQ 271
>gi|258515628|ref|YP_003191850.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans
DSM 771]
gi|257779333|gb|ACV63227.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans
DSM 771]
Length = 275
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 27/289 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE +R +E G+ +++I + I G+ +F+ ++G+ I S R+G
Sbjct: 1 MPELPEVETIKRTLEPKLTGQSFTEALIYLPTIIRIPGIE--EFKKEIVGQKIKSISRRG 58
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L + L + F MTG R DE K++ ++LD G E
Sbjct: 59 KYLTINLSNNLALIFHLRMTG-------------RLIYCHADEPIVKHTHLILKLDSGNE 105
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D R+F ++ L++ +V + +LGP+ + T + L +++ IK LLLD
Sbjct: 106 LRFIDVRQFGRIWLVSVQKLNTVSGLKDLGPEPFDKKFTREFLKKELRRRRTRIKPLLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
Q++I+G+GN ADE L++A+IHP + A +L+ + L I+EV+E+ + +
Sbjct: 166 QTFIAGLGNIYADEALHRARIHPEKLACNLTARETSKLFITIREVLEEGINNRGTTFRDY 225
Query: 234 ----SQFPSNWIFHSREKKPGKAFVDGK-KIDFITAGGRTTAYVPELQK 277
Q SN + G+ + K I I GR++ + P QK
Sbjct: 226 VDGNGQAGSNQELLQIYNREGQPCLKCKTTIVRIKISGRSSYFCPSCQK 274
>gi|417987088|ref|ZP_12627650.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 32G]
gi|410524152|gb|EKP99069.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 32G]
Length = 282
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDASTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ VP +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEP--TPRTFDETEFARRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|258652623|ref|YP_003201779.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM
44233]
gi|258555848|gb|ACV78790.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM
44233]
Length = 288
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 141/303 (46%), Gaps = 41/303 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ARR + + + ++I + D+ V ++ ++++G+ +AHR+GK
Sbjct: 1 MPELPEVESARRVLADGALHRRIA-DVDDHDDYVTRPLTPGALRSALIGRTFTAAHRRGK 59
Query: 61 NLWLRL----DSPPFP---------SFQFGMTGAIYIKGVAVTQ----------YKRSAV 97
++WL + D P P GM+G + + G + + Y+R
Sbjct: 60 SMWLTVSGDRDDPTDPDASPGDPDLGIHLGMSGIVVVTGPSAPEASGTDLVGGDYRRDRE 119
Query: 98 KDTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-LEPMT 156
+ D Y +F V DG + D RR ++VRL P I LGPDAL L P
Sbjct: 120 QFVDR--GAYQRFAVTFADGGRMRLLDPRRLSRVRL------DPDIQALGPDALGLSPTA 171
Query: 157 V-DEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
T +KA LLDQS ++G+GN +ADE L++AKI+P + +LS L
Sbjct: 172 FRTAMTAGRRVSTAPVKARLLDQSVLAGVGNLLADEALWRAKINPGRGVDTLSTAQLNRL 231
Query: 216 LKCIKEVIEKAL-EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPE 274
+ ++ + A+ G + + +R + G A V G GGRTT + +
Sbjct: 232 GRAVQSALTDAIARGGVHTGDVIAARKSGARCPRCGGAMVSG------VVGGRTTWWCSK 285
Query: 275 LQK 277
Q+
Sbjct: 286 EQR 288
>gi|191638698|ref|YP_001987864.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei BL23]
gi|385820412|ref|YP_005856799.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei LC2W]
gi|385823599|ref|YP_005859941.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei BD-II]
gi|418005432|ref|ZP_12645425.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UW1]
gi|190713000|emb|CAQ67006.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNA
glycosylase) (DNA-(apurinic or apyrimidinic site) lyase
mutM) (AP lyase mutM) [Lactobacillus casei BL23]
gi|327382739|gb|AEA54215.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei LC2W]
gi|327385926|gb|AEA57400.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei BD-II]
gi|410546829|gb|EKQ21073.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UW1]
Length = 282
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDASTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ VP +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEP--TPRTFDETEFARRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|302342357|ref|YP_003806886.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM
2075]
gi|301638970|gb|ADK84292.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM
2075]
Length = 272
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 49/298 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E +G+ IV K+++ D DG+ GK+I
Sbjct: 1 MPELPEVECVRRTLEPAVLGRAIVAVQINYAKAVLPDARAFADGLG---------GKSIT 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFV 112
+ R GK L L LD F + MTG + + D+ P + + +
Sbjct: 52 ATARHGKLLILGLDQGAFMTIHLRMTGQVIV---------------ADQAPQADHIHARI 96
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKIT 170
+LDDG L + D R+F ++ D ++ P++ +GPDAL + + F + +
Sbjct: 97 DLDDGQSLFYRDMRKFGRLNYCPDAQALQNGPLANMGPDAL--ELEAEAFATLVGARGGK 154
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+K +LLDQ ++G+GN ADE L++A + PL +LS + L + +++ + +ALE G
Sbjct: 155 LKNVLLDQRVLAGVGNIYADESLHRAGLSPLADPRALSADDLDRLHRALRQTLLEALEQG 214
Query: 231 ADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S + F + + R +P V G+ ++ I GR T + P Q+
Sbjct: 215 GSSVRNFMDAHGRAGTFQHSHRVYRRTGQPCP--VCGQPVERIVVAGRGTHFCPACQE 270
>gi|390630661|ref|ZP_10258639.1| Formamidopyrimidine-DNA glycosylase [Weissella confusa LBAE C39-2]
gi|390484128|emb|CCF30987.1| Formamidopyrimidine-DNA glycosylase [Weissella confusa LBAE C39-2]
Length = 277
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+K++ + + + K I G++ +F+A ++G+ I R+GK
Sbjct: 1 MPELPEVETVRRGLTRLVVGRKVLGTEVRWE-KTISGMAPEEFDAELVGRTIEKVDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R M GA Y + T+ P K+ LD+G++L
Sbjct: 60 YLLFRFSGGLTMVSHLRMEGAYY-----------TVPAGTE--PGKHDLVTFHLDEGIDL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ D V ++++GP+ + +++ K ++ +K LLDQ
Sbjct: 107 FYRDTRKFGRMNLVPDADALQVAGLAKIGPEPTEKDLSLAYMVSEFGKSRMHVKPFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
S+I+G+GN DE L+Q++IHPL A L+++ A L + I I +A E
Sbjct: 167 SHIAGLGNIYVDETLWQSQIHPLTAANKLTEDELARLRENIIHEITRATEHHGTTVHSFT 226
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
++ +F + + R +P G ++ + R T Y P Q
Sbjct: 227 TAFGEAGEFQNELQVYGRVGEP--CLRCGHPLEKMKVAQRGTTYCPVCQ 273
>gi|409997557|ref|YP_006751958.1| hypothetical protein BN194_18920 [Lactobacillus casei W56]
gi|406358569|emb|CCK22839.1| hypothetical protein BN194_18920 [Lactobacillus casei W56]
Length = 299
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 18 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 74
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD K+ DG +
Sbjct: 75 KYLLMRLSNGETIISHLRMEGRYYV------------VKDASTPFDKHDHVTFTFQDGSQ 122
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ VP +++LGP+ P T DE F L + IK++L
Sbjct: 123 LRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEP--TPRTFDETEFARRLKRHHKPIKSVL 180
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 181 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 240
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 241 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 293
>gi|421186694|ref|ZP_15644076.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB418]
gi|399965498|gb|EJO00070.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Oenococcus oeni AWRIB418]
Length = 274
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 142/291 (48%), Gaps = 31/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++++ +KI K + K++D ++F V+G + R+GK
Sbjct: 1 MPELPEVETVRRGLKKYFENEKI-KDLKIIYPKLLDS-DRTEFIEKVVGSTVSRIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RLD+ M G R +V+ E P K+++ EL++G ++
Sbjct: 59 FLLFRLDNNLTIVSHLRMEG-------------RYSVEAAQEAPHKHTEMIFELENGKQV 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K++L+ N+ V I +GP+ + +T D F + L K K +KA LLD
Sbjct: 106 FYDDTRKFGKMKLVKSGNEAVEVKSIGSMGPEPVESDLTFDYFYNRLQKSKKAVKAWLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG------- 230
Q+ ++GIGN ADEVL+ ++I PL+ +S+E L + I + A+E G
Sbjct: 166 QNNVAGIGNIYADEVLWLSEISPLRPTNEISEEEADNLRENIIRELAFAIENGGSTVHSF 225
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ + + R +P + DG ++ I R T Y P+ QK
Sbjct: 226 IDASGHTGRMQDKLHAYGRAGQPCER--DGGELIKIRVAQRGTTYCPKCQK 274
>gi|379705759|ref|YP_005204218.1| formamido pyrimidine-DNA glycosylase [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374682458|gb|AEZ62747.1| formamido pyrimidine-DNA glycosylase [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 273
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 135/290 (46%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +G+KIV + V +SA FE+ +LG+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLERLIVGRKIVSVDVRVPKMVKTDLSA--FESDLLGQTIQSIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD S M G + ++ +D K+ F +LDDG L
Sbjct: 59 YLLLNLDEQVIIS-HLRMEGKYLL-------FEHQVPED------KHFHIFFDLDDGSTL 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L+ N + +LGP+ E V EFT LS K IK LLDQ
Sbjct: 105 VYKDVRKFGTMELVAENQVAAYFQKRKLGPEPTKEDFDVAEFTRKLSASKKLIKPYLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN DEVL+ AKIHP + A SL K L I +++ ++ G + +
Sbjct: 165 TLVAGLGNIYVDEVLWAAKIHPERQANSLQKAEINLLHDEIIRILQLGIKKGGSTIRTYQ 224
Query: 239 NWI-----------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
N + + + +P I+ I GGR T + P QK
Sbjct: 225 NALGENGTMQEYLQVYGKTDEPCPRC--ATPIEKIKVGGRGTHFCPACQK 272
>gi|341615546|ref|ZP_08702415.1| DNA-formamidopyrimidine glycosylase [Citromicrobium sp. JLT1363]
Length = 260
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 17/276 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE EA R + C+ + I + DD I+ + + ++G HR GK
Sbjct: 1 MPELPEAEANRLRVARDCLNRTIEAAEPGDDTDHIE-LPGDNERGRLVGHQFTQTHRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + P+ + GMTG++ D D+ P Y+KF + + L
Sbjct: 60 LIFAGSGTGPWIAVHLGMTGSLR-------------PFDADDGPPDYAKFVIRFEGERRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F R+ VR+++ P + E GPDA ++ D F + + + IK+ L+ Q
Sbjct: 107 AFRCPRKLGWVRVVDSPQAEIDRIEFGPDAF--EISRDVFVEVIGTSRGAIKSALMQQKK 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
++GIGN +DE+L++ I P + L +E + ++ ++ ++ AD S+ P +W
Sbjct: 165 LAGIGNLWSDEILFRLGIDPQRKGTQLDEEQLGEMYDAMRNILRAVVDTQADYSKLPEDW 224
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ H+R++ + G +I GGR+ + Q
Sbjct: 225 LIHTRDEG-AECPQCGGRITRTKVGGRSAFHCTRHQ 259
>gi|386740668|ref|YP_006213848.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 31]
gi|384477362|gb|AFH91158.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 31]
Length = 285
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G+ + +++ V+ G + EA + G+ + S HR
Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVVVSHSRAARYVVGG--PQELEARLRGRVLSSVHR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + IK + + + ++ + S+ S
Sbjct: 59 RGKFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQS--------- 109
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F R+ S VP P++ + D LLEP T L K K + I
Sbjct: 110 -ELWFVDQRTFGYWRIAELVYSHNRLVPKPMAHIAAD-LLEPAQDLMATARLIKTKHLEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL + V+ AL G
Sbjct: 168 KRLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLNEGQRVMHNALLQGG 227
Query: 232 DS 233
S
Sbjct: 228 TS 229
>gi|333978062|ref|YP_004516007.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333821543|gb|AEG14206.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 274
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R ++E G I I K+I S +F V+ K IL R+GK
Sbjct: 1 MPELPEVETVKRTLKERLPGLTICGVDIYLP-KIIQTPSPEEFCRQVVDKKILDVGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L MTG + TDE SK++ L++G +L
Sbjct: 60 YLLISLSQGLMLVVHLRMTGQL-------------VYTVTDEPRSKHTHLVFHLNNGHQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F + L+ D +V + +LG + L T++ L ++ +K LLLDQ
Sbjct: 107 RFTDMRQFGRFWLVPERDLQAVSGLKDLGVEPLSREFTIEFLEKELKARRTRLKTLLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++ISG+GN DE L++A +HP + A +L+ L + I+ V+E+ + S +
Sbjct: 167 TFISGLGNIYVDEALHRAGLHPSRPANTLTPGEVEALFQAIRAVLEEGIASRGTSVRDYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + +P GK I+ + GGR+ + P QK
Sbjct: 227 DGTGQAGTFQEKLRVYGKSGRP--CMRCGKTIERLRLGGRSAYFCPGCQK 274
>gi|374606088|ref|ZP_09678985.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus dendritiformis C454]
gi|374388315|gb|EHQ59740.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus dendritiformis C454]
Length = 280
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 130/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + GK I + + + + +F ++ G I R+GK
Sbjct: 1 MPELPEVETVKRTLNTLVAGKTIERVTVTLPRIIQRPANIEEFCDALSGHTIEQVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD G+T +++ R V E K++ L DG EL
Sbjct: 61 FLRILLD---------GLTLVSHLR-----MEGRYGVFKAGEPVEKHTHVIFHLTDGSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L ++ +PP+ +LG + L E T + T L K++ IK +LL+Q
Sbjct: 107 RYKDVRQFGTMHLFRRDEEWGMPPLQKLGVEPLSEQFTPEVLTALLRKRRSFIKPVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ GIGN DE L++A IHPL+ A L+ C L + I + +A+E G S
Sbjct: 167 HVVVGIGNIYVDEALFRAGIHPLRPADELTDAECVRLHEAIIATLSEAVEAGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P G+ I+ GGR T Y P QK
Sbjct: 227 NGQGEMGMFQHQLQMYGRQGEP--CIRCGQIIEKSVVGGRGTHYCPRCQK 274
>gi|421876480|ref|ZP_16308037.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE C10]
gi|372557773|emb|CCF24157.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum LBAE C10]
Length = 280
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 138/297 (46%), Gaps = 45/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +++ IG IV K I D N I GV + F A
Sbjct: 1 MPELPEVETVRRGLKKLIIGGHIVQVKLPYPKVISGDSNAFITGVMNAYFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVEPREATPHKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D + + D RRF ++ L ++ VP +++LGP+ + +++D +K K
Sbjct: 99 LSDNRAVFYNDTRRFGRMVLATTGHEKIDVPSLAKLGPEPTADDLSLDYMVTVFAKSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-- 228
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP SLS+ A L + I + + +A++
Sbjct: 159 VKSFLLDQNQIAGIGNIYADEVLWQSKIHPETPTNSLSRTVLAVLRQNIIDEMARAIKHH 218
Query: 229 ---------VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V + QF + + R +P G + I G R T + P Q
Sbjct: 219 GTTVHSFSNVFGEVGQFQNELQAYGRVGQP--CLRCGTIMSKIKVGQRGTTFCPFCQ 273
>gi|337291061|ref|YP_004630082.1| formamidopyrimidine-DNA glycosylase [Corynebacterium ulcerans
BR-AD22]
gi|334699367|gb|AEG84163.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium ulcerans
BR-AD22]
Length = 285
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 143/304 (47%), Gaps = 44/304 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E H +GK + ++ V +G A + EA + G+++ S HR+
Sbjct: 1 MPELPEVEVVRRGLECHAVGKTLTSITVSHPRAVRYTEG-GAQEIEARLRGRSLSSVHRR 59
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
GK LW LD GM+G + IK D +++ L D
Sbjct: 60 GKFLWFVLDDSCALMVHLGMSGQMLIK-------------HADAHSHPHTRIRCSLSDEE 106
Query: 117 --GLELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KK 168
G EL F D+R F RL + VP P++ + D LLEP T L K K
Sbjct: 107 ARG-ELWFVDQRTFGYWRLAELTYAHNRLVPEPMAHIAAD-LLEPAQDLMATARLIKSKH 164
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL- 227
+ IK LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL+ + V+ KAL
Sbjct: 165 VEIKKLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLSAIHSLLREGQIVMNKALL 224
Query: 228 -----------EVGADSSQFPSNWIFHSREKKP-GKAFVDGKKIDFITAGGRTTAYVPEL 275
V +S F + + +E +P G+ + F R++ + P+
Sbjct: 225 QGGTSFDSLYVNVNGESGYFDVSLHAYGQEGRPCGRCGCAVMREKF---SNRSSHFCPQC 281
Query: 276 QKLN 279
Q+L
Sbjct: 282 QRLQ 285
>gi|332638559|ref|ZP_08417422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella cibaria KACC 11862]
Length = 277
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 123/230 (53%), Gaps = 16/230 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ + + + + K +DG+S +F+A + G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLTRLVVGRTVQGTAVWWE-KTVDGLSPEEFDAELAGRRIEAIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F GMT +++ + Y A + P K+ LDDG++L
Sbjct: 60 YLLFR--------FSGGMTMVSHLR-MEGAYYTVPAGTE----PGKHDLVTFHLDDGIDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ D + V ++++GP+ +++ K ++ +K LLDQ
Sbjct: 107 LYRDTRKFGRMKLVPDAEALQVAGLAKIGPEPTESTLSLAYMVAEFGKSRMHVKPFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
S+I+G+GN DE L+Q+KIHPL A LS++ A L I + +A E
Sbjct: 167 SHIAGLGNIYVDETLWQSKIHPLTPANKLSEDELAVLRDNIIAELARATE 216
>gi|348169251|ref|ZP_08876145.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Saccharopolyspora spinosa NRRL 18395]
Length = 372
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 28/248 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
+PELPEVE RR + EH +G+ + + V V D F + G+ + +A R+G
Sbjct: 7 VPELPEVEVVRRGVAEHAVGRTLSSVEVLHPRAVRRHVPGPDDFAGRLAGRCLSAARRRG 66
Query: 60 KNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K LWL L D P GM+G + V+ D K+ +
Sbjct: 67 KYLWLELGDEAGSPDSGGEALVVHLGMSGQLL-------------VQPGDAREEKHLRVR 113
Query: 112 VEL-DDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
+ D G EL F D+R F + L + D ++P P++ + PD L + VD L
Sbjct: 114 LRFADGGPELRFVDQRTFGGLHLADLVEVDGIALPKPVAHIAPDPLEQVFAVDAVAARLR 173
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
++ IK LLDQS +SG+GN ADE L++A++H + +L++ L + +V+++
Sbjct: 174 SRRTGIKRALLDQSLVSGVGNIYADEALWRAQLHWARPTATLTRPKIRELFDAVTDVMQE 233
Query: 226 ALEVGADS 233
AL+VG S
Sbjct: 234 ALQVGGTS 241
>gi|294815351|ref|ZP_06773994.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064]
gi|326443705|ref|ZP_08218439.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces clavuligerus ATCC 27064]
gi|294327950|gb|EFG09593.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064]
Length = 289
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 119/239 (49%), Gaps = 19/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ G+ I + + V ++ A DF A + G ++ A R+G
Sbjct: 1 MPELPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL L D+ GM+G + V+ D K+ + + DD
Sbjct: 61 KYLWLPLADTDSSVLGHLGMSGQLL-------------VQPEDAADEKHLRIRISFDDSL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL F D+R F + L N P +P I+ + D L D F +L K+ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A++H + SL++ A LL I++V+ AL G S
Sbjct: 168 LLDQSLISGVGNIYADEALWRARLHYERPTASLTRPRSAELLGHIRDVMNAALAAGGTS 226
>gi|443490209|ref|YP_007368356.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium liflandii
128FXT]
gi|442582706|gb|AGC61849.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium liflandii
128FXT]
Length = 292
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 35/258 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
L K IK LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V+
Sbjct: 165 LRGKHSEIKRQLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 224 EKALEVGADSSQFPSNWI 241
+AL G S F S ++
Sbjct: 225 REALAKGGTS--FDSLYV 240
>gi|183981796|ref|YP_001850087.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M]
gi|238689243|sp|B2HJJ6.1|FPG_MYCMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|183175122|gb|ACC40232.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M]
Length = 292
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDTALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
L K IK LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V+
Sbjct: 165 LRGKHSEIKRQLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 224 EKALEVGADSSQFPSNWI 241
+AL G S F S ++
Sbjct: 225 REALAKGGTS--FDSLYV 240
>gi|312144077|ref|YP_003995523.1| formamidopyrimidine-DNA glycosylase [Halanaerobium
hydrogeniformans]
gi|311904728|gb|ADQ15169.1| formamidopyrimidine-DNA glycosylase [Halanaerobium
hydrogeniformans]
Length = 276
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 126/236 (53%), Gaps = 16/236 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE + + I K I + ++N + +S + + ++G I S R+G
Sbjct: 1 MPELPEVETVIKGLRPLIINKTITDLEVREENLIGYPDLSTVELKQMLIGAKIDSISRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + ++LD MTG + VK+ +E+ K++ LDDG E
Sbjct: 61 KYILIKLDINKILVIHLRMTGKL-------------LVKEVEEFRDKHTHIIFSLDDGQE 107
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ F + R+F ++ L++ P ++ LGP+ L + +++++F + + ++ IK+LLL+
Sbjct: 108 IRFNNVRKFGRIYLIDPDRPEQAGGLATLGPEPLSDQLSLEDFKNLFTNRRGVIKSLLLN 167
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
Q +I+GIGN ADE+LY + I P + A +LS+E + +K+++EK + G S
Sbjct: 168 QKFIAGIGNIYADEILYLSGIKPDRKADTLSEEEKEKIYFNMKDILEKGIIYGGTS 223
>gi|167629831|ref|YP_001680330.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum
Ice1]
gi|238687886|sp|B0TER7.1|FPG_HELMI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|167592571|gb|ABZ84319.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum
Ice1]
Length = 277
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ G I K + K+ + + F ++ G+ I+ R+GK
Sbjct: 1 MPELPEVETVRRSLAGRITGLTIEK-VELRLPKIAFALPGTLFTDALRGRRIIELGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD MTG + + R ++ E ++ FF LDDG L
Sbjct: 60 YLLLHLDGDETLVIHLRMTGRLI--------HLRPEEREEPEAAHTHAVFF--LDDGSLL 109
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD R+F + L+ ++ P LGP+ L + + +F ++L K+K +K LLLDQ
Sbjct: 110 RYTDVRQFGTLTLMTREAALRQPGKGRLGPEPLGQDFSFVDFRNALVKRKTKLKPLLLDQ 169
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
S+++G+GN ADE L +A++HP +TA SL E L CI+ V+++ ++ S
Sbjct: 170 SFLAGLGNIYADEALARARLHPDRTADSLDDEESRRLYDCIRTVLQEGIDAKGTSFRDYV 229
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+F + R P + G +I GR+T + P QK
Sbjct: 230 DGEGRKGEFQEKLWVYGRGGNPCRRC--GGEILREKRAGRSTHFCPRCQK 277
>gi|406929845|gb|EKD65330.1| hypothetical protein ACD_50C00117G0012 [uncultured bacterium]
Length = 279
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 149/296 (50%), Gaps = 36/296 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI------VKSIIADDNKVIDGVSASDFEASVLGKAILS 54
MPELPEVE R ++++ +GK I +K I++ D K ++G ++
Sbjct: 1 MPELPEVETIRLGLQKYIVGKTIKDVEVRLKKIVSGDPK------------DIIGAKVVD 48
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R GK L + LD+ + +TG + ++K S K E P+K++ +L
Sbjct: 49 VRRFGKGLVIDLDNGYSITSHIKLTGQFVYRDSKTAKFKISP-KVGKEIPNKFTHVIFKL 107
Query: 115 DDGLELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
D+G+ + + D R+F ++++ +ELGP+ + +T D+F +++S+ K IK
Sbjct: 108 DNGI-VYYNDVRQFGWIKIIQSSKLKDQSFFNELGPE-FFKDLTFDKFLETISRAKGPIK 165
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LL+DQ +SG+GN A++ L+ AKI P ++A +S E L I +V++K LE G
Sbjct: 166 PLLMDQKKMSGVGNIYANDALFDAKIDPRRSAKQISDEEIKKLYNAILKVLKKGLEQGGA 225
Query: 233 SSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S + ++++ + REK+P + V I I GGR T + + QK
Sbjct: 226 SELNYVNVLGQEGGYQNHFLVYGREKEPCR--VCKTPIQKIKLGGRGTYFCSKCQK 279
>gi|300087227|ref|YP_003757749.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299526960|gb|ADJ25428.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 271
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 135/287 (47%), Gaps = 25/287 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE I + + +++ ++ + G S + F A + G+ + R+GK
Sbjct: 1 MPELPEVETVTNEIRPY-VQDRVITGVVVHWPGTVRGHSPAQFSADLEGRRVTGVFRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LD MTG++ G D D+ P Y + + LDDG +
Sbjct: 60 YIVWELDDGNRLLTHLKMTGSLIALG-----------PDDDDPP--YVRVEIRLDDGRRV 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F ++ L+ + + V ++ LGP+ L + T + F L K+K +K LLDQ+
Sbjct: 107 IFRDPRKFGRMALVGEASGV--LAGLGPEPLADEFTAEVFESLLRKRKSPVKTALLDQTL 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-GADSSQF--- 236
++GIGN ADE L+ A IHPL+ A SL + L I+ ++ A++ GA S +
Sbjct: 165 MAGIGNMYADEALHSAGIHPLRPADSLDTDEYRRLYLAIRRILRSAIDARGASISNYIRP 224
Query: 237 -----PSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+++ F K+ G ++ I GR T P Q+L
Sbjct: 225 GGDLGHAHFAFKVAHKRGENCRGCGTPLERIVIRGRGTYLCPACQRL 271
>gi|219116146|ref|XP_002178868.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409635|gb|EEC49566.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 367
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 43/312 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN--------KVIDGVSASDFEASVLGKAI 52
MPELPEVE R+ + ++ DN + I+ +S + +L
Sbjct: 1 MPELPEVEQFRQLLLPLVSSSSPIQISAWKDNPPRVWLSEEQINSLSGKYYCVDIL---- 56
Query: 53 LSAHRKGKNLWLRLD------------SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT 100
RKGK L + L + GMTG I + + R + K
Sbjct: 57 ----RKGKQLCIVLQPSKANGQKKEPKKSVYLYLHMGMTGRISSPNRE-SGWGRQSSKVA 111
Query: 101 D-EWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALL---EPMT 156
D E+P +Y+ + + + +F+D R+F K +L+D ++ P L PDAL E +
Sbjct: 112 DIEYPPRYT-YLTFATEHYQAAFSDPRKFGKA-VLSD--NLDPFGLLAPDALNCNDEKLI 167
Query: 157 VDEFTDSLSKKKITIKALLLDQSYI-SGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
+E ++ +IKA+LLDQ+ + SG+GNWVADEVLYQ +HP Q L++E + L
Sbjct: 168 RNEIIPGFVEQTRSIKAILLDQNRVCSGVGNWVADEVLYQIGMHPDQQY--LTEEQGSRL 225
Query: 216 LKCIKEVIEKALEVGADSSQFPSNWIFHSR--EKKPGKAFVDGKKIDFITAGGRTTAYVP 273
+ ++ ++ A+ +++P +W+F R +K+ GK G+ + F+T+GGRT+A V
Sbjct: 226 FETLQAIVRTAVGCLNSDTKYPDSWLFGYRWTKKRAGKD-AAGRALTFLTSGGRTSAIVA 284
Query: 274 ELQKLNGVQAAK 285
+QKLN Q +
Sbjct: 285 SVQKLNKRQGRR 296
>gi|118617607|ref|YP_905939.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99]
gi|166215639|sp|A0PQ49.1|FPG_MYCUA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|118569717|gb|ABL04468.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium ulcerans
Agy99]
Length = 292
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 122/258 (47%), Gaps = 35/258 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
L K +K LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V+
Sbjct: 165 LRGKHSEVKRRLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 224 EKALEVGADSSQFPSNWI 241
+AL G S F S ++
Sbjct: 225 REALAKGGTS--FDSLYV 240
>gi|379748344|ref|YP_005339165.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
ATCC 13950]
gi|378800708|gb|AFC44844.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
ATCC 13950]
Length = 282
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 116/248 (46%), Gaps = 25/248 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LDS GM+G + + V + R SA+ LDDG
Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISAL----------------LDDGT 104
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 105 VLSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKR 164
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V+ AL G S
Sbjct: 165 QLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS 224
Query: 234 SQFPSNWI 241
F S ++
Sbjct: 225 --FDSLYV 230
>gi|384515973|ref|YP_005711065.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium ulcerans 809]
gi|334697174|gb|AEG81971.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium ulcerans 809]
Length = 285
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 144/301 (47%), Gaps = 40/301 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E H +GK + ++ V +G A + EA + G+++ S HR+
Sbjct: 1 MPELPEVEVVRRGLECHAVGKTLTSITVSHPRAVRYTEG-GAQEIEARLRGRSLSSVHRR 59
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT--DEWPSKYSKFFVELDD 116
GK LW LD GM+G + IK + + ++ + DE +
Sbjct: 60 GKFLWFILDDSCALMVHLGMSGQMLIKHANAHSHPHTRIRCSLSDE------------EA 107
Query: 117 GLELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKIT 170
EL F D+R F RL + VP P++ + D LLEP T L K K +
Sbjct: 108 RGELWFVDQRTFGYWRLAELTYAHNRLVPEPMAHIAAD-LLEPAQDLMATARLIKSKHVE 166
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL--- 227
IK LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL+ + V+ KAL
Sbjct: 167 IKKLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLSAIHSLLREGQIVMNKALLQG 226
Query: 228 ---------EVGADSSQFPSNWIFHSREKKP-GKAFVDGKKIDFITAGGRTTAYVPELQK 277
V +S F + + +E +P G+ + F R++ + P+ Q+
Sbjct: 227 GTSFDSLYVNVNGESGYFDVSLHAYGQEGRPCGRCGCAVMREKF---SNRSSHFCPQCQR 283
Query: 278 L 278
L
Sbjct: 284 L 284
>gi|254822110|ref|ZP_05227111.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
ATCC 13950]
gi|379755633|ref|YP_005344305.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
MOTT-02]
gi|379763177|ref|YP_005349574.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
MOTT-64]
gi|387877002|ref|YP_006307306.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium sp. MOTT36Y]
gi|378805849|gb|AFC49984.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
MOTT-02]
gi|378811119|gb|AFC55253.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare
MOTT-64]
gi|386790460|gb|AFJ36579.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium sp. MOTT36Y]
Length = 282
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + + V + R + LDDG
Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISAL---------------LDDGTV 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 106 LSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V+ AL G S
Sbjct: 166 LLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS- 224
Query: 235 QFPSNWI 241
F S ++
Sbjct: 225 -FDSLYV 230
>gi|365840768|ref|ZP_09381945.1| DNA-formamidopyrimidine glycosylase [Anaeroglobus geminatus F0357]
gi|364560511|gb|EHM38445.1| DNA-formamidopyrimidine glycosylase [Anaeroglobus geminatus F0357]
Length = 273
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MP+ EVE RR + G+ I +++ ++I S +DF A++ G+ + + RKGK
Sbjct: 1 MPKFTEVETVRRTLAAVLPGRTI-ETVHVALPRLIKNASPADFAAALRGQTVTAVQRKGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGA-IYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L L D P MTG+ +Y A + P K + LD G
Sbjct: 60 YLRLVFDGPRHLLIHLRMTGSLVYFPAAA-------------DLP-KSAHIIFRLDKG-N 104
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R F + L+ PT V LGPDA TVD L K + T+KA LLD
Sbjct: 105 LVYCDVRTFGCLWLIPPAGPTGVKGYDTLGPDANGPDFTVDYIWSLLKKSERTVKAFLLD 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-F 236
Q+ I+G+GN ADE L+ A I P + S++K+S L + I+ V+ + + G + + F
Sbjct: 165 QTVIAGLGNIYADEALFLAGIRPSRRCGSMTKKSLVALHEAIQSVLAEGITYGGTTIRNF 224
Query: 237 PS----------NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ N + RE +P G + ++ GGR T Y P QK
Sbjct: 225 VNGSGREGGNRKNLAVYGREGEP--CIKCGTAVQYVKQGGRGTRYCPHCQK 273
>gi|386391951|ref|ZP_10076732.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfovibrio sp. U5L]
gi|385732829|gb|EIG53027.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfovibrio sp. U5L]
Length = 289
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 140/312 (44%), Gaps = 58/312 (18%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RA+ +G+ +V I A D KV+ + + + + G+ I + R+
Sbjct: 1 MPELPEVETIARALAPGLVGRVVV-GIEAPDRKVLATPKTRAAWAKAAAGRTITAVSRRA 59
Query: 60 KNLWLRLDSPP----------------FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEW 103
K L + L P +F MTG +I TD
Sbjct: 60 KLLLVHLGPGPASGSVPGGPGLDEDTLLFAFHLKMTGRFHIA-------------PTDAP 106
Query: 104 PSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEP--MTVD 158
P Y++ V L DG L F+D RRF RLL P ++ P + LGP EP MT +
Sbjct: 107 PPAYARLLVRLGDGQSLVFSDMRRFGTARLLT-PQALSDWPFYATLGP----EPWDMTPE 161
Query: 159 EFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKC 218
F +LS++ IKA+LLDQ+ I+GIGN ADE L+ A I P A SLS LL
Sbjct: 162 AFEAALSRRTTRIKAVLLDQTVIAGIGNIYADESLFAAGIRPDAPAKSLSAGQRQKLLAA 221
Query: 219 IKEVIEKALEVGADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFIT--AG 265
++ VI +A+ G + + F + + + +P G + ++
Sbjct: 222 VQAVIARAIAAGGSTIRDYRTPDGVEGGFQHQFTVYGKAGEP----CPGCRTVLVSTKVA 277
Query: 266 GRTTAYVPELQK 277
GRT+ + P QK
Sbjct: 278 GRTSTFCPRCQK 289
>gi|116617644|ref|YP_818015.1| formamidopyrimidine-DNA glycosylase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096491|gb|ABJ61642.1| DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 277
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 117/237 (49%), Gaps = 32/237 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ IG KI+ K I D + I GV ++F+
Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFK--------- 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 52 QIDRRGKYLLLRLANNHTIVSHLRMEG----------QY---SVESLETVPYKHTEIVFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D L + D RRF ++ L + T VP +S+LGP+ E +T+ SK +
Sbjct: 99 LSDKRALFYNDTRRFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLSYMMAIFSKSRRP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+K LLDQ+ I+GIGN ADEVL+Q+KIHP A L + + L I I++A+
Sbjct: 159 VKTFLLDQTQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANIISEIKRAI 215
>gi|296111203|ref|YP_003621584.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU
11154]
gi|339491521|ref|YP_004706026.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc sp. C2]
gi|295832734|gb|ADG40615.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU
11154]
gi|338853193|gb|AEJ31403.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc sp. C2]
Length = 287
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IG +I K + KVI G S + F VL + R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGSQI-KQVKLPYPKVITGDSQA-FVTGVLNATFHAIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL + M G QY +V+ P K+++ ELDD +
Sbjct: 59 YLLLRLSNGHTIVSHLRMEG----------QY---SVEPLGAQPYKHTEIIFELDDQRAI 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L ++ V + +LGP+ +T+ D S+ K +K+ LLD
Sbjct: 106 FYNDTRRFGRMVLTTTDHETDEVQSLGKLGPEPTDVSLTLPYMIDIFSRSKKPVKSFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE--------- 228
Q+ I+GIGN ADEVL+Q+KIHP A LS+ ATL + I ++ A++
Sbjct: 166 QNKIAGIGNIYADEVLWQSKIHPETPANELSEIELATLRQNIISEMKMAIKNHGTTVHSF 225
Query: 229 --VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V + QF + + R +P G+ + I G R T Y P Q
Sbjct: 226 SNVFGEVGQFQNKLEAYGRVGQP--CLRCGEPLVKIKVGQRGTTYCPVCQ 273
>gi|395203525|ref|ZP_10394716.1| DNA-formamidopyrimidine glycosylase [Propionibacterium humerusii
P08]
gi|422439794|ref|ZP_16516614.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA3]
gi|422471878|ref|ZP_16548369.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA2]
gi|422573633|ref|ZP_16649194.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL044PA1]
gi|313836650|gb|EFS74364.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA2]
gi|314928157|gb|EFS91988.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL044PA1]
gi|314972156|gb|EFT16253.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA3]
gi|328907981|gb|EGG27741.1| DNA-formamidopyrimidine glycosylase [Propionibacterium humerusii
P08]
Length = 282
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 117/238 (49%), Gaps = 19/238 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS----ASDFEASVLGKAILSAH 56
MPELPEVE R +E+H I +V+ + D + + A+ F+ ++ G +
Sbjct: 1 MPELPEVETVRAGLEDHVI-PAVVEGVDVIDARGLRPSGGPEDAALFQTALTGHQFTAVR 59
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+GK LW L+ GM+G Q++ V D ++++ + L+D
Sbjct: 60 RRGKYLWFVLNDGTAMLAHLGMSG----------QFR---VVDRHATRHRHTRIVIALND 106
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G +L F D+R F + L +P P+ + PD + VDE L +K T+K L
Sbjct: 107 GRDLRFLDQRTFGGLALAPLLDGIPGPVVHIAPDPFEKCFDVDEVARRLRTRKSTLKKSL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LDQ+ +SGIGN ADE L++A+ HP LS+ LL+ +EVI +A+ G S
Sbjct: 167 LDQTLVSGIGNIYADETLWRARYHPETPCSYLSQPKAVELLQTAREVIAEAISAGGTS 224
>gi|443306800|ref|ZP_21036587.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium sp. H4Y]
gi|442764168|gb|ELR82166.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium sp. H4Y]
Length = 282
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLTDRITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + + V + R + LDDG
Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISAL---------------LDDGTV 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 106 LSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V+ AL G S
Sbjct: 166 LLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS- 224
Query: 235 QFPSNWI 241
F S ++
Sbjct: 225 -FDSLYV 230
>gi|41407426|ref|NP_960262.1| hypothetical protein MAP1328c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417750615|ref|ZP_12398970.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440776928|ref|ZP_20955757.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41395778|gb|AAS03645.1| hypothetical protein MAP_1328c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|336457778|gb|EGO36772.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436722916|gb|ELP46802.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 262
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 28/282 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + + G++ V+ + D ++ +A+ + G+ R GK
Sbjct: 1 MPELPDVEGFRRQLADALPGRR-VRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D P GMTG Y + ++ + V LD G EL
Sbjct: 60 WLVLPTDGPTL-LIHSGMTGRPYYCADGAAE-------------DRHQRLVVSLDQG-EL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPIS-ELGPDALLEPMTVDEFTDSL---SKKKITIKALLL 176
+TD R+ V L +DP + PI+ GPDAL + + +F D+L S ++ +K+ L+
Sbjct: 105 RYTDLRKLRGVWLADDPDDLVPITGRQGPDAL--GLGLRDFRDALTARSARRRQLKSALM 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF 236
DQS ++G+GN + DE+ ++A+I P + L + L + + +V+ A+ G +
Sbjct: 163 DQSVLAGLGNLLVDEICWRARIRPTRAVADLDDDEVKALHRAMTQVLRTAVRHG----RV 218
Query: 237 PS--NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
P W+ +R+ G ++D GGRTT + P Q
Sbjct: 219 PGLPRWLTGARDAPDPHCPRCGGRLDHARVGGRTTLWCPRCQ 260
>gi|406031886|ref|YP_006730778.1| Formamido pyrimidine-DNA glycosylase [Mycobacterium indicus pranii
MTCC 9506]
gi|405130433|gb|AFS15688.1| Formamido pyrimidine-DNA glycosylase [Mycobacterium indicus pranii
MTCC 9506]
Length = 282
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLTDRITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + + V + R + LDDG
Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAVPRADHVRISAL---------------LDDGTV 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 106 LSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V+ AL G S
Sbjct: 166 LLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS- 224
Query: 235 QFPSNWI 241
F S ++
Sbjct: 225 -FDSLYV 230
>gi|381336121|ref|YP_005173896.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|356644087|gb|AET29930.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 277
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 117/237 (49%), Gaps = 32/237 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ IG KI+ K I D + I GV ++F+
Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFK--------- 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 52 QIDRRGKYLLLRLANNHTIVSHLRMEG----------QY---SVESLETVPYKHTEIVFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D L + D RRF ++ L + T VP +S+LGP+ E +T+ SK +
Sbjct: 99 LSDKRALFYNDTRRFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLSYMKAIFSKSRRP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+K LLDQ+ I+GIGN ADEVL+Q+KIHP A L + + L I I++A+
Sbjct: 159 VKTFLLDQTQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANIISEIKRAI 215
>gi|149182833|ref|ZP_01861294.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1]
gi|148849448|gb|EDL63637.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1]
Length = 274
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR + E GK+I KS+ K++ D V +F+ S+ G+ I R
Sbjct: 1 MPELPEVETVRRTLAELVTGKRI-KSVSVFWPKMVKLPDEVE--EFKLSLQGETIQGVDR 57
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK L L+ D ++ + + ++G R V DE K++ +DG
Sbjct: 58 RGKFLILQTD-------RYSLVSHLRMEG-------RYGVFPGDEEVEKHTHVIFHFEDG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL + D R+F + L + P+S+LGP+ TV+ T+ L+K + +KA+L
Sbjct: 104 TELRYKDVRKFGTMHLFPKGEENLSLPLSQLGPEPFSPNFTVNYLTEKLAKTERAVKAVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
LDQ+ + G+GN DE L+++ IHP + A S+ K L I + + +A+E G +
Sbjct: 164 LDQTVLVGLGNIYVDEALFRSGIHPARKAKSVKKSEMKKLHNEIIDTLSEAVEQGGSTIR 223
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ + ++ GK I+ GR T + P QK
Sbjct: 224 SYVNSQGQIGMFQQQLFVYGRKNEECRSC--GKPIEKNVTAGRGTHFCPNCQK 274
>gi|421858164|ref|ZP_16290440.1| formamidopyrimidine-DNA glycosylase [Paenibacillus popilliae ATCC
14706]
gi|410832266|dbj|GAC40877.1| formamidopyrimidine-DNA glycosylase [Paenibacillus popilliae ATCC
14706]
Length = 280
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + GK I + + + + +F ++ G I R+GK
Sbjct: 1 MPELPEVETVKRTLHTLAAGKTIERVTVTLPRIIQRPANIEEFCDALSGHTIEQVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD G+T +++ R + T E K++ L DG EL
Sbjct: 61 FLRILLD---------GLTLVSHLR-----MEGRYGLFQTGEPVEKHTHVIFHLTDGSEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + S+PP+ +LG + L E T D L K++ IK +LL+Q
Sbjct: 107 RYKDVRQFGTMHLFRRGEEWSMPPLQKLGVEPLSEQFTPDVLIALLRKRRSFIKPVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++GIGN DE L++A IHPL+ A L+ L + I + +A+E G S
Sbjct: 167 HVVAGIGNIYVDEALFRAGIHPLRPANELTDAEYVRLHEAIVATLTEAIEAGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P G+ I+ GGR T + P QK
Sbjct: 227 NGQGEIGMFQHQLQMYGRQGEP--CICCGQIIEKSVVGGRGTHFCPRCQK 274
>gi|429730865|ref|ZP_19265511.1| DNA-formamidopyrimidine glycosylase [Corynebacterium durum F0235]
gi|429147303|gb|EKX90333.1| DNA-formamidopyrimidine glycosylase [Corynebacterium durum F0235]
Length = 284
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 23/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+H G+ +V + + D E + G + + R+GK
Sbjct: 1 MPELPEVEVVRRGLEQHVQGRTLVGPEVLHPRAARHNTTPRDVEKHLDGAVVQAVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL L GM+G + +KG +E ++ + V LDDG +L
Sbjct: 61 FLWLVLGDEAL-LVHLGMSGQMLMKG-------------PEETTHRHLRARVHLDDGNQL 106
Query: 121 SFTDKRRFAK---VRLLNDPT-----SVPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
F D+R F V L++ P +P I+ + PD L + + + ++ +K +
Sbjct: 107 WFVDQRTFGYWSVVPLIDAPVPSAHQRIPASIAHIAPDLLDPTLDLSDLARTVKQKDTEL 166
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K +LLDQ +SGIGN ADE+L+QA +H Q A ++ +LL+ + V+E AL G
Sbjct: 167 KRVLLDQRVVSGIGNIYADEMLWQAGLHGRQRASRIATSRLVSLLEAGQSVMEHALLQGG 226
Query: 232 DS 233
S
Sbjct: 227 TS 228
>gi|313899426|ref|ZP_07832936.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2]
gi|312955714|gb|EFR37372.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2]
Length = 276
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 131/289 (45%), Gaps = 27/289 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E H + + ++ N +I A+ F ++GK I +R GK
Sbjct: 1 MPELPEVETVVRTLE-HQLDRVMITGCEVFWNNIIGYPDAAIFCRDIVGKTIQGYYRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L + M G Y V+ E K+ ++L DG +L
Sbjct: 60 YMRFDLGDMEWIC-HMRMEGKFY-------------VQQPQEPYDKHVHVILQLSDGRQL 105
Query: 121 SFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K+ L D +S P +G DA E +T + +L KKK +KA+LLD
Sbjct: 106 RYHDTRKFGKMYLYEKRADVSSYPCFKNIGYDAFDERITAEWMYHTLHKKKTALKAVLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD----- 232
Q YI+GIGN ADE+ + +HP L K+ L+ I+ ++ A+ G
Sbjct: 166 QRYIAGIGNIYADEICFAMHMHPETMINHLRKKDFEELIYHIRRILNGAIRAGGTTIRSY 225
Query: 233 SSQFPSNWIFHSREK---KPGKAF-VDGKKIDFITAGGRTTAYVPELQK 277
+SQ + F + K K G+A V G KI I R T + P Q+
Sbjct: 226 TSQLGVDGRFQLKLKVHAKKGEACPVCGTKIKKIVVATRGTCFCPTCQR 274
>gi|39996100|ref|NP_952051.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA]
gi|409911545|ref|YP_006890010.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens
KN400]
gi|81702906|sp|Q74EG5.3|FPG_GEOSL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|39982865|gb|AAR34324.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA]
gi|298505115|gb|ADI83838.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens
KN400]
Length = 271
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 133/291 (45%), Gaps = 34/291 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H G++ V ++ A K+ + + + G+ I R+ K
Sbjct: 1 MPELPEVETTLRGIAPHVTGRR-VTAVTARAAKLRLPIP-PELGERLTGRVIERVERRAK 58
Query: 61 NLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L LR D GMTG + V P KY + LDDG
Sbjct: 59 YLLLRCGDGTAI--IHLGMTGTLR-------------VAPAGSPPGKYDHLDLVLDDGRT 103
Query: 120 LSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK-ITIKALLLD 177
L F D R+F V +DP + P +++LGP+ P+ + S S+K+ IK LL+D
Sbjct: 104 LRFRDPRKFGLVLWTGSDPLAHPLLAQLGPEPF-PPLFNGSYLFSRSRKRNAAIKLLLMD 162
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG------- 230
+ G+GN A+E L++A+IHP + A SLS+E CATL + +V+ A+ G
Sbjct: 163 NRIVVGVGNIYANEALFRARIHPERAAGSLSEEDCATLATAVGDVLRDAIAEGDTTLHEF 222
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F N + + KP V G I I G R+T + P QK
Sbjct: 223 IATEVPSGYFRINPAVYGQTGKP--CTVCGTPIARIRLGNRSTWFCPVCQK 271
>gi|311277444|ref|YP_003939675.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1]
gi|308746639|gb|ADO46391.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1]
Length = 269
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 30/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ ++ ++ VSA S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNE-RLRWPVSAEIHSLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + D D P K+ + + +G L
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRI------------LPD-DLPPEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF P ++ LGP+ L + VD + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKTLEGHPVLAHLGPEPLSDAFNVDYLREKCTKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------- 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+++++E G +
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSADECERLVRAIKTVLKRSIEQGGTTLKDFLQS 223
Query: 234 ----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y QK
Sbjct: 224 DGKPGYFAQELQVYGRKDEPCR--VCGTPITATKHAQRATFYCRRCQK 269
>gi|239632071|ref|ZP_04675102.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|417980899|ref|ZP_12621576.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 12A]
gi|417983726|ref|ZP_12624362.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 21/1]
gi|417993231|ref|ZP_12633580.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei CRF28]
gi|417996574|ref|ZP_12636853.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei M36]
gi|418011140|ref|ZP_12650906.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei Lc-10]
gi|418013193|ref|ZP_12652846.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei Lpc-37]
gi|239526536|gb|EEQ65537.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|410523835|gb|EKP98754.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 12A]
gi|410527995|gb|EKQ02857.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei 21/1]
gi|410531703|gb|EKQ06419.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei CRF28]
gi|410535420|gb|EKQ10045.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei M36]
gi|410552777|gb|EKQ26791.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei Lc-10]
gi|410556140|gb|EKQ30062.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei Lpc-37]
Length = 282
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++G I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVGSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ V +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVTALAKLGPEP--TPSTFDEADFAQRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|241888677|ref|ZP_04775984.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC
10379]
gi|241864700|gb|EER69075.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC
10379]
Length = 285
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 144/303 (47%), Gaps = 45/303 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK----SIIADDNKV----IDGVSASDFEASVLGKAI 52
MPELPEVE + +EE I KKI+ ++ D +KV I S F SV GK I
Sbjct: 1 MPELPEVENIKFGLEEVVINKKIINITYSKVVEDSHKVGKMAIVKQKLSAFSDSVKGKEI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK----YS 108
R+GK L+ L+ + FGMTGA ++ VKD E +K +
Sbjct: 61 EKLSRRGKYLYFTLNEGYIIT-HFGMTGAFFL------------VKDIAEITNKNYYKHQ 107
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
EL G +L ++D RRF ++R ++D T P L P+ + F L + K
Sbjct: 108 HVIFELSTGEKLVYSDIRRFGELRYIDDITKFKPFINLAPEPF-DKKAKKYFLSKLEENK 166
Query: 169 I---TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
+IKALLL+ + G GN EVLY+ KIHPL A LSK+ +L K + ++++
Sbjct: 167 YREQSIKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKKKESLFKELIDILDF 226
Query: 226 ALEVGADSSQFPSNWI-----------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPE 274
A++ G + S+++ FH K K G +++ +T GR++ + P
Sbjct: 227 AIKEGGST---ISDYVHADGGEGNMQNFHQIYGK--KVCPLGHEVENVTIKGRSSHFCPI 281
Query: 275 LQK 277
QK
Sbjct: 282 CQK 284
>gi|300858756|ref|YP_003783739.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis FRC41]
gi|375288937|ref|YP_005123478.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 3/99-5]
gi|379715634|ref|YP_005303971.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 316]
gi|383314515|ref|YP_005375370.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis P54B96]
gi|384504931|ref|YP_005681601.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 1002]
gi|384507028|ref|YP_005683697.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis C231]
gi|384509116|ref|YP_005685784.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis I19]
gi|384511206|ref|YP_005690784.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis PAT10]
gi|385807816|ref|YP_005844213.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 267]
gi|387136855|ref|YP_005692835.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 42/02-A]
gi|300686210|gb|ADK29132.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis FRC41]
gi|302206462|gb|ADL10804.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis C231]
gi|302331017|gb|ADL21211.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 1002]
gi|308276704|gb|ADO26603.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis I19]
gi|341825145|gb|AEK92666.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis PAT10]
gi|348607300|gb|AEP70573.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 42/02-A]
gi|371576226|gb|AEX39829.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 3/99-5]
gi|377654340|gb|AFB72689.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 316]
gi|380870016|gb|AFF22490.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis P54B96]
gi|383805209|gb|AFH52288.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 267]
Length = 285
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 120/242 (49%), Gaps = 22/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G+ + ++ V+ G + EA + G+ + S HR
Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVAVSHSRAARYVVGG--PQELEARLRGRVLSSVHR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + IK + + + ++ + S+ S
Sbjct: 59 RGKFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQS--------- 109
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F R+ S VP P++ + D LLEP T L K K + I
Sbjct: 110 -ELWFVDQRTFGYWRIAELVYSHNRLVPKPMAHIAAD-LLEPAQDLMATARLIKTKHLEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL + V+ AL G
Sbjct: 168 KRLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLNEGQRVMHNALLQGG 227
Query: 232 DS 233
S
Sbjct: 228 TS 229
>gi|260428860|ref|ZP_05782837.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45]
gi|260419483|gb|EEX12736.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45]
Length = 283
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 20/290 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I K+++ + + + G + R+ K
Sbjct: 1 MPELPEVETVRRGLAPVMEGNTIAKALVNRPD--LRWPFPERMAERLTGARVERLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GMTG + + G A+ ++ V D P K+ ++L DG +
Sbjct: 59 YILGDLDSGETLLIHLGMTGRMLVSGDALGRF----VHD-HPAPEKHDHVVLDLADGARI 113
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ T+ P ++ LGP+ L + +LS + + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMNLMPTATAEQHPLLAALGPEPLGNAFSESHLMAALSGRTMPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN E LY+ IHP + +S + A+L+ I++V+E+A+ G S +
Sbjct: 174 KIVAGLGNIYVCEALYRCGIHPGRRVSRISAKRIASLVPVIRQVLEEAIAAGGSSLRDFR 233
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE P + + + I GR++ Y P Q+
Sbjct: 234 QADGELGYFQHSFDVYGREGAPCRTPGCTETVHRIVQSGRSSFYCPSCQR 283
>gi|227432492|ref|ZP_03914478.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227351763|gb|EEJ42003.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 277
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 117/237 (49%), Gaps = 32/237 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ IG KI+ K I D + I GV ++F+
Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFK--------- 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 52 QIDRRGKYLLLRLANNHTIVSHLRMEG----------QY---SVESLETVPYKHTEIVFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D L + D RRF ++ L + T VP +S+LGP+ E +T+ SK +
Sbjct: 99 LSDKRALFYNDTRRFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLPYMKAVFSKSRRP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+K LLDQ+ I+GIGN ADEVL+Q+KIHP A L + + L I I++A+
Sbjct: 159 VKTFLLDQTQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANIISEIKRAI 215
>gi|324997986|ref|ZP_08119098.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia sp. P1]
Length = 286
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 23/283 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE AR A+ G+ I + D+ V D +++ G + +AHR GK
Sbjct: 19 MPELPEVENAR-AVLAQATGRTIT-DVDDRDDWVCRPHRPGDIASALKGGRLTAAHRIGK 76
Query: 61 NLWLRL-----DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK-DTDEWPSKYSKFFVEL 114
+W D+ P GM G I + + + D ++ +F V
Sbjct: 77 TMWCDTETSDGDAGPALGVHLGMGGRIVVTNSGGERIGGGPARPDRQARKREWDRFTVTF 136
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
DDG + DKRR +VRL P +S LGPDA E + F + L + + +KA
Sbjct: 137 DDGGQFRLFDKRRLGRVRL------DPDLSGLGPDA--EGLRPAVFRERLLRGRSAVKAR 188
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS ++G+GN +ADE L+QA+I P L++ L + + +E+A+ A+
Sbjct: 189 LLDQSVLAGVGNLLADETLWQARIAPATPVRDLTRTDLDRLHRNLDRALERAI---ANGG 245
Query: 235 QFPSNWIFHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQ 276
I H + PG G ++ T GGR+T + P+ Q
Sbjct: 246 VHTGEVIEH---RHPGGHCPRCGAEMVHGTVGGRSTWWCPQEQ 285
>gi|392400863|ref|YP_006437463.1| formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis Cp162]
gi|390531941|gb|AFM07670.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis Cp162]
Length = 285
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 120/242 (49%), Gaps = 22/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G+ + ++ V+ G + EA + G+ + S HR
Sbjct: 1 MPELPEVEVVRRGLERHVVGRALTSVAVSHSRAARYVVGG--PQELEARLRGRVLSSVHR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + IK + + + ++ + S+ S
Sbjct: 59 RGKFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQS--------- 109
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F R+ S VP P++ + D LLEP T L K K + I
Sbjct: 110 -ELWFVDQRTFGYWRIAELVYSHNRLVPKPMAHIAAD-LLEPAQDLMATARLIKTKHLEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL + V+ AL G
Sbjct: 168 KRLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLNEGQRVMHNALLQGG 227
Query: 232 DS 233
S
Sbjct: 228 TS 229
>gi|212638360|ref|YP_002314880.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus
WK1]
gi|212559840|gb|ACJ32895.1| Formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus
WK1]
Length = 273
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + +GK I + + K+I + F + G+ I + R+GK
Sbjct: 1 MPELPEVETVRLTLLPLVVGKTI-ERVKVHWPKIIQHPDVATFCERLKGQTIHNIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +LD S M G R + D +++ F D EL
Sbjct: 60 FLLFQLDDVVLVS-HLRMEG-------------RYIYEKEDAPFDQHTHIFFTFTDQTEL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + VPP+S +G + E TV TD L + K TIKA LLDQ
Sbjct: 106 RYRDVRKFGTMHLFSKGEELHVPPLSSIGVEPFDEQFTVAWLTDQLQRTKRTIKATLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++G+GN DEVL+++ IHP +TA +L+ L + I + I++A+E G + +
Sbjct: 166 TIVAGLGNIYVDEVLFRSSIHPERTAATLTIREIEALHEAIVQTIQEAIEKGGSTVRTYV 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + R KP + G+ I T R T Y Q
Sbjct: 226 NTQGKIGKFQTQLYVYGRVNKPCRR--CGEPIVKTTVANRGTHYCKHCQ 272
>gi|254775599|ref|ZP_05217115.1| hypothetical protein MaviaA2_13153 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 262
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 28/282 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + + G++ V+ + D ++ +A+ + G+ R GK
Sbjct: 1 MPELPDVEGFRRQLADALPGRR-VRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D P GMTG Y + ++ + V LD G EL
Sbjct: 60 WLVLPTDGPTL-LIHSGMTGRPYYCADGAAE-------------DRHQRLVVSLDQG-EL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPIS-ELGPDALLEPMTVDEFTDSL---SKKKITIKALLL 176
+TD R+ V L +DP + PI+ GPDAL + + +F D+L S ++ +K+ L+
Sbjct: 105 RYTDLRKLRGVWLADDPDDLVPITGRQGPDAL--GLGLLDFRDALTARSARRRQLKSALM 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF 236
DQS ++G+GN + DE+ ++A+I P + L + L + + +V+ A+ G +
Sbjct: 163 DQSVLAGLGNLLVDEICWRARIRPTRAVADLDDDEVKALHRAMTQVLRTAVRHG----RV 218
Query: 237 PS--NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
P W+ +R+ G ++D GGRTT + P Q
Sbjct: 219 PGLPRWLTGARDAPNPHCPRCGARLDHARVGGRTTLWCPRCQ 260
>gi|134299455|ref|YP_001112951.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum reducens
MI-1]
gi|172044279|sp|A4J4X3.1|FPG_DESRM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|134052155|gb|ABO50126.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Desulfotomaculum reducens MI-1]
Length = 277
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 135/291 (46%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILS-AHRKG 59
MPELPEVE R++E+H G ++ S+ +VI F ++G+ R+G
Sbjct: 1 MPELPEVETIVRSLEKHLSGL-VITSVDLFKPEVIRTPRVDIFTDQIVGRQFQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L + G+T I+++ R D D K++ LD+G +
Sbjct: 60 KYLLLHMSD--------GLTLVIHLRMTG-----RLIYCDADLPLEKHTHVIFHLDNGKQ 106
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D RRF ++ L+ + +P I E+GP+ L + + L +++ IK+LLLD
Sbjct: 107 LRFADVRRFGRMSLVPTREVPHLPGIKEMGPEPLDTAFSREYLKKELRRRRTRIKSLLLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD----- 232
Q +++G+GN ADE L++AKIHP + A L+ + L K I EVI ++
Sbjct: 167 QCFVAGLGNIYADEALHEAKIHPERLAPDLTSREASGLHKAIIEVISSGIKHRGTTFRDY 226
Query: 233 ------SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S + ++RE P GK I I GR++ Y QK
Sbjct: 227 VDGEGRSGSYQHQLKVYNREGLPCPHC--GKPIQRIKVAGRSSYYCSSCQK 275
>gi|414153053|ref|ZP_11409380.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455435|emb|CCO07282.1| Formamidopyrimidine-DNA glycosylase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 277
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 130/291 (44%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILS-AHRKG 59
MPELPEVE R +EE G ++ + +VI F + GK R+G
Sbjct: 1 MPELPEVETVVRTLEEKLCGL-VITDVELFKPEVIRFPKPDQFIEQITGKQFQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L L MTG R + D+ K++ L +G
Sbjct: 60 KYLLLHLSDHLTLVVHLRMTG-------------RLVYCEADQPLIKHTHVIFRLSNGKH 106
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D RRF ++ L + + +P I +LGP+ L + T + F L +++ IK LLLD
Sbjct: 107 LRFADTRRFGRLLLTSTEEVYGLPGIRDLGPEPLDQEFTREFFKKELRRRRSRIKPLLLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q +++G+GN ADE L++AKIHP + A LS A L + I EVI +E S +
Sbjct: 167 QCFMAGLGNIYADEALFRAKIHPERLAPELSSREVANLHRAIVEVIASGIEHRGTSFRDY 226
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ + ++R P GK I+ I GR++ Y P QK
Sbjct: 227 VDGEGQAGSYQHHLKVYNRAGLPCSR--CGKPIERIKVAGRSSYYCPACQK 275
>gi|118466096|ref|YP_882333.1| formamidopyrimidine DNA-glyxosylase [Mycobacterium avium 104]
gi|118167383|gb|ABK68280.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein
[Mycobacterium avium 104]
Length = 262
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 28/282 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + + G++ V+ + D ++ +A+ + G+ R GK
Sbjct: 1 MPELPDVEGFRRQLADALPGRR-VRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D P GMTG Y + +Y + V LD G EL
Sbjct: 60 WLVLPTDGPTL-LIHSGMTGRPYYCADGAAE-------------DRYQRLVVSLDQG-EL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPIS-ELGPDALLEPMTVDEFTDSL---SKKKITIKALLL 176
+TD R+ V L +DP + PI+ GPD+L + + +F D+L S ++ +K+ L+
Sbjct: 105 RYTDLRKLRGVWLADDPDDLVPITGRQGPDSL--GLGLRDFRDALTARSARRRQLKSALM 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF 236
+QS ++G+GN + DE+ ++A+I P + L + L + + +V+ A+ G +
Sbjct: 163 EQSVLAGLGNLLVDEICWRARIRPTRAVADLDDDEVKALHRAMTQVLRTAVRHG----RV 218
Query: 237 PS--NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
P W+ +R+ G ++D GGRTT + P Q
Sbjct: 219 PGLPRWLTGARDAPDPHCPRCGGRLDHARVGGRTTLWCPRCQ 260
>gi|296283925|ref|ZP_06861923.1| DNA-formamidopyrimidine glycosylase [Citromicrobium bathyomarinum
JL354]
Length = 260
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE EA R +E C+ + I + DD I+ + + ++G HR GK
Sbjct: 1 MPELPEAEANRLRVERDCLHRTIEAAEPGDDTSYIE-LPGDNERGRLVGHQFTRTHRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ +S P+ GM+G++ D + P Y+KF + + L
Sbjct: 60 LIFAGSESGPWICVHLGMSGSL-------------RPFDEADGPPDYAKFLIRFEGERRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F R+ VR+++ P + GPDAL + D F + + + IK+ L++Q
Sbjct: 107 AFRCPRKLGWVRVVDSPEAEIERIGFGPDAL--EIGRDAFAEVIGDSRGAIKSALIEQKK 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
++G+GN +DE+LY+ I P + LS + +++++ ++ AD S+ P +W
Sbjct: 165 LAGVGNLWSDEILYRTAIDPQRKGTDLSDSQLGDIYDAMRDILHAVVDTEADYSKLPDDW 224
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ H+R++ + G +I GGR+ + Q+
Sbjct: 225 LIHTRDEG-AECPRCGGEIVRTKVGGRSAFHCTRHQE 260
>gi|110677612|ref|YP_680619.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh
114]
gi|122973136|sp|Q16DL0.1|FPG_ROSDO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|109453728|gb|ABG29933.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh
114]
Length = 283
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G I + AD N+ + +D A + GK + R+
Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIAR---ADVNRPDLRWPFPADMAARLTGKRVERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + LDS GM+G + + G + Q+ S P K+ + +
Sbjct: 58 KYILMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHS-----HPAPEKHDHVVFHMANNAR 112
Query: 120 LSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ + + +S LGP+ L ++ + +K++LLD
Sbjct: 113 ITFNDPRRFGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFKNRNSPVKSVLLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q +SG+GN E L++AKIHP++ A +S ATL+ I+EV+ +A+E G S +
Sbjct: 173 QRIVSGLGNIYVCEALFRAKIHPIRKAGKISGARVATLVPIIREVLAEAIEAGGSSLRDF 232
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE P K +I I GR++ Y + Q+
Sbjct: 233 KQADGELGYFQHSFDVYGREGAPCKGEGCTGQIKRIVQSGRSSFYCAQCQR 283
>gi|283769053|ref|ZP_06341959.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219]
gi|283104410|gb|EFC05787.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219]
Length = 269
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 34/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ I + ++S+ +K++ F + G+ R+GK
Sbjct: 2 MPELPEVETVVRTLEQQ-ISQCQIRSVRVYYDKIVG--DPKRFTDCLSGQRFRYFSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +LD M G YI+ D E +++ +LD+G+EL
Sbjct: 59 YLLFQLDRNTL-VVHLRMEGKFYIQ-------------DPREPLNRHIHVVFDLDNGMEL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDS-LSKKKITIKALLLDQS 179
+ D R+F ++ +L + LGP+ +P+ E+ + L +KK +K++LLDQS
Sbjct: 105 RYMDTRKFGRMEVLPKELDLKNFHGLGPEPF-DPIFDSEYVYAFLKRKKAPLKSVLLDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+++GIGN ADE+L + I P +A LSK+ C L++ ++E++ ++E+G +
Sbjct: 164 FVAGIGNIYADEILAKIGIRPKMSARRLSKKKCEALVEAVQEILANSIELGGTTIRSYTS 223
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+F + + H ++ P ++I + GR++ Y P QK
Sbjct: 224 SLGVAGRFQTKCMVHLQKICPKCQ----REIKMVRVAGRSSYYCPHCQK 268
>gi|361126970|gb|EHK98955.1| putative Formamidopyrimidine-DNA glycosylase [Glarea lozoyensis
74030]
Length = 271
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
+ KK + IKALLLDQ+ ISGIGNWV DEVLY AK HP Q + + S E L I V
Sbjct: 1 MRKKHVPIKALLLDQANISGIGNWVGDEVLYHAKFHPEQYSDTFSTEQIQKLHSSIYYVC 60
Query: 224 EKALEVGADSSQFPSNWIFHSR----EKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
A++ ADSS+FP +W+F R +K +G KI IT GGRT+A VP +QK
Sbjct: 61 STAIDALADSSKFPDDWLFKHRWGKGKKDSTNTLPNGAKITHITVGGRTSAIVPSVQKKT 120
Query: 280 G 280
G
Sbjct: 121 G 121
>gi|441509919|ref|ZP_20991831.1| formamidopyrimidine-DNA glycosylase [Gordonia aichiensis NBRC
108223]
gi|441445934|dbj|GAC49792.1| formamidopyrimidine-DNA glycosylase [Gordonia aichiensis NBRC
108223]
Length = 293
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 115/250 (46%), Gaps = 30/250 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E+H +G+ I + V V A D + G IL+A R+G
Sbjct: 1 MPELPEVETVRAGLEKHVVGRTITDVEVLHPRAVRRHVGDAPDLIGRLRGATILAARRRG 60
Query: 60 KNLWLRLDSPP----FP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL + +P F GM+G + + V + V+ T L
Sbjct: 61 KYLWLDVAAPQGDDRFALVVHLGMSGQMLVARVGAPDHTHLRVRAT-------------L 107
Query: 115 DDGLELSFTDKRRF----------AKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG EL F D+R F A V L D ++P I+ + PD D+
Sbjct: 108 DDGNELRFVDQRTFGGWHLDDYVDAGVELPGDSGALPRSIAHIAPDPFDPAFDRDDVVRR 167
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
+ K +K LLDQS ISG+GN ADE L++A+++ + +SK A LL EV+
Sbjct: 168 MRGKHTEVKRALLDQSLISGVGNIYADEALWRARLNGTRVTDGISKAKLAELLDAATEVM 227
Query: 224 EKALEVGADS 233
AL VG S
Sbjct: 228 SDALAVGGTS 237
>gi|392393531|ref|YP_006430133.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390524609|gb|AFM00340.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 273
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ + + +I + I+ ++G F +V G I S R+GK
Sbjct: 1 MPELPEVETIRRSLCQRILNLRI-EDILIRWPGAVEGYEGKTFADTVKGLRIQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ MTG R + P K++ ++L G E+
Sbjct: 60 YLLFTLEEGWSFIAHMRMTG-------------RLVYHAQGQEPEKHTHVVLKLSSG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + P ++ LGP+ L + +E L+ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLKQPSLARLGPEPLEGGFSAEELARRLAPRKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++G+GN ADE L++A I P + A SL+KE L I +V+E+ + S +
Sbjct: 166 NLLAGVGNIYADEALFRAGIAPERCANSLTKEETEKLYTAICQVLEEGIAANGTSFRDYQ 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R + K G ++ I GR+T + P Q+
Sbjct: 226 DANGEKGDFQKELNVYGRGGEACKCC--GHTLERIRLAGRSTVFCPRCQR 273
>gi|297559195|ref|YP_003678169.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296843643|gb|ADH65663.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 284
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 27/242 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH +G+ + + V + +DF A + G+ +A R+G
Sbjct: 1 MPELPEVEVVRRGLAEHALGRTVGAVEVLHPRAVRRYLPGPADFAARLSGRVPTAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD+ GM+G + ++ DE ++ + + L DG E
Sbjct: 61 KYLWLVLDNGEMLLTHLGMSGQMLVQ----------PEGKPDE---RHLRVRLPLSDGTE 107
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDAL----LEPM----TVDEFTDSLSKKKITI 171
L F D+R F + + VP + E P ++ L+P+ ++F +L ++ +
Sbjct: 108 LRFVDQRTFGHLMV-----DVPGVREDVPSSVDHIALDPLDPDFVAEDFVRALRARRTEV 162
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLDQS ISG+GN ADE L+++++H ++ LS LL + +V+ +ALEVG
Sbjct: 163 KRALLDQSLISGVGNIYADEALWRSRLHWARSTRELSDAEAVELLGHVGQVMNEALEVGG 222
Query: 232 DS 233
+
Sbjct: 223 TT 224
>gi|387138931|ref|YP_005694910.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|389850685|ref|YP_006352920.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 258]
gi|349735409|gb|AEQ06887.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|388247991|gb|AFK16982.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium
pseudotuberculosis 258]
Length = 285
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 120/242 (49%), Gaps = 22/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK---VIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G+ + ++ V+ G + EA + G+ + S HR
Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVAVSHSRAARYVVGG--PQELEARLRGRVLSSVHR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + IK + + + ++ + S+ S
Sbjct: 59 RGKFLWFVLDDSCALMVHLGMSGQMLIKQADASLHPHTRIRCSLSSGSEQS--------- 109
Query: 118 LELSFTDKRRFAKVRLL-----NDPTSVPPISELGPDALLEPMTVDEFTDSLSK-KKITI 171
EL F D+R F R+ ++ + P++ + D LLEP T L K K + I
Sbjct: 110 -ELWFVDQRTFGYWRIAELVYSHNRLAPKPMAHIAAD-LLEPAQDLMATARLIKTKHLEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLL+Q ++GIGN ADE+L+ A+IHP Q A LS + +LL + V+ AL G
Sbjct: 168 KRLLLNQEIVAGIGNIYADEMLWSAQIHPRQKAHRLSLRAIHSLLNEGQRVMHNALLQGG 227
Query: 232 DS 233
S
Sbjct: 228 TS 229
>gi|333374342|ref|ZP_08466224.1| DNA-formamidopyrimidine glycosylase [Desmospora sp. 8437]
gi|332967877|gb|EGK06972.1| DNA-formamidopyrimidine glycosylase [Desmospora sp. 8437]
Length = 274
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +++ GK + + ++ + + F + G+ + R+GK
Sbjct: 1 MPELPEVETVKRTLQKLITGKTVEEVKVSLPRILQEPPDPQLFGEMLKGRKVTGVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D + + + ++G R +++ + +K++ DG EL
Sbjct: 61 FLRIFFDP-------WVLVSHLRMEG-------RYSLESAETPVAKHTHVIFRFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + ++PP+ +LGP+ L E T+ F L+K+K IKALLL+Q
Sbjct: 107 RYRDVRQFGTMHLWPKGEELNLPPLRKLGPEPLSEAFTLAGFAAGLAKRKTNIKALLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++ G+GN DE L+ A IHP + SL + L K I+ + KA+E G S
Sbjct: 167 EFLCGLGNIYVDEALFTAGIHPERRVQSLDSDEVKRLYKSIRSTLVKAVEAGGSSVRSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P G I+ GR T + PE Q+
Sbjct: 227 DGNGEMGMFQLQIQVYGRKGEP--CLHCGHPIERRVVAGRGTHFCPECQQ 274
>gi|427392236|ref|ZP_18886241.1| formamidopyrimidine-DNA glycosylase [Alloiococcus otitis ATCC
51267]
gi|425731642|gb|EKU94457.1| formamidopyrimidine-DNA glycosylase [Alloiococcus otitis ATCC
51267]
Length = 274
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 25/288 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ RR +E +GK I + + DN + S F+ +LG+ I R+GK
Sbjct: 1 MPELPEVESVRRGLEAQVVGKTIQEVQVYWDNIIESPKPVSQFKRRLLGQTIHQVKRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD S M G + + D D +K+S DG +L
Sbjct: 61 LLLFYLDQDVLIS-HLRMEG-------------KYGLLDQDAPLTKHSHVIFNFRDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ +++LGP+ E +T++ L+ K IK++LLDQ
Sbjct: 107 RYEDVRKFGRMSLVEKGKEAQHKSLAQLGPEPTFEDLTLEWMLTFLAHKTRAIKSILLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ G+GN ADE+L+QA+I P + SL+ E L + +++++A G + +
Sbjct: 167 KLLVGVGNIYADEILFQARIQPDRPGGSLTNEEVEALRQAAIKILQEATLRGGSTVRSYK 226
Query: 239 NWI--------FHSREKKPGKAFVDGKK-IDFITAGGRTTAYVPELQK 277
N + FH K G + I I GR T + P Q+
Sbjct: 227 NSLGQAGTYQDFHQVYGKEGDPCPRCHQPIKKIKLNGRGTHFCPHCQQ 274
>gi|171780160|ref|ZP_02921064.1| hypothetical protein STRINF_01948 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281508|gb|EDT46943.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 273
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +G++IV + V +SA FE+ +LG+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLERLIVGREIVSVDVRVPKMVKTDLSA--FESDLLGQTIQSIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD S M G + ++ +D K+ F LDDG L
Sbjct: 59 YLLLNLDEQVIIS-HLRMEGKYLL-------FEHQVPED------KHFHIFFGLDDGSTL 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L+ N + +LGP+ E V EFT LS K IK LLDQ
Sbjct: 105 VYKDVRKFGTMELVAENQVAAYFQKRKLGPEPTKEDFDVAEFTRKLSASKKLIKPYLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN DEVL+ AKIHP + A SL K L I +++ ++ G + +
Sbjct: 165 TLVAGLGNIYVDEVLWAAKIHPERQANSLQKAEINLLHDEIIRILQLGIKKGGSTIRTYQ 224
Query: 239 NWIFHSREKKPGKAFVDGKK----------IDFITAGGRTTAYVPELQK 277
N + + + V GK I+ I GGR T + P QK
Sbjct: 225 NALGENGTMQEYLQ-VYGKTDEPCPRCATPIEKIKVGGRGTHFCPACQK 272
>gi|261408691|ref|YP_003244932.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10]
gi|261285154|gb|ACX67125.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10]
Length = 277
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 131/292 (44%), Gaps = 35/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPELPEVE +R + + GK I + + ++I D + A F + G + R
Sbjct: 1 MPELPEVETVKRTLNQLIKGKHI-DHVSVNLPRIIQRPDDIEA--FAFMLKGHTVEGVER 57
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK L + LD S M G R V +E K++ DG
Sbjct: 58 RGKFLRILLDGLVLVS-HLRMEG-------------RYGVYRAEEPVEKHTHVIFHFSDG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL + D R+F + L + P+++LG + L + T F + + KK IKA+L
Sbjct: 104 TELRYKDVRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
L+Q+Y+ GIGN DE L++AKIHP + A SL L I + + +A++ G S
Sbjct: 164 LNQAYVVGIGNIYVDEALFRAKIHPERNANSLKDAELKRLYHAIVDTLSEAVDAGGSSIK 223
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F ++ + R+ KP A G I I GGR T Y P+ Q
Sbjct: 224 SYVNGQGEMGMFQNSHQIYGRKDKPCHAC--GGPIHKIVVGGRGTHYCPKCQ 273
>gi|429205419|ref|ZP_19196696.1| formamidopyrimidine-DNA glycosylase [Lactobacillus saerimneri 30a]
gi|428146491|gb|EKW98730.1| formamidopyrimidine-DNA glycosylase [Lactobacillus saerimneri 30a]
Length = 275
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 136/296 (45%), Gaps = 40/296 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+ VK + K+I+ ++F + GK IL+ R+GK
Sbjct: 1 MPELPEVETVRRGLIKLVQGRT-VKKVTVLYPKMIES-DLTEFVTQLTGKKILTVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR M G + V+ + K++ +LDDG +L
Sbjct: 59 YLLLRFSGDLTVVSHLRMEGKYF-------------VQPQTQPLEKHTHVVFDLDDGQQL 105
Query: 121 SFTDKRRFAKVRLL-----NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
+ D R+F ++RL+ ND S + +LGP+ TVD F +L ++K IK L
Sbjct: 106 RYNDSRKFGRMRLVQTGQENDLKS---LQKLGPEPFAPEFTVDYFAQALHRRKKAIKTAL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
LDQ+ ++G+GN DEVL+ KIHP A +++ L + I +++A+ G +
Sbjct: 163 LDQTIVTGLGNIYVDEVLWMTKIHPETPANHVTRSEITALRQNIIAELQRAITAGGTTIR 222
Query: 234 -----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
QF N + + P G I+ I G R T + P+ QK+
Sbjct: 223 SYTDAFRNMGEFQFALN--VYGNDGHPCPRC--GTIIEKIKVGQRGTHFCPQCQKV 274
>gi|329767933|ref|ZP_08259445.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341]
gi|328838596|gb|EGF88199.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341]
Length = 286
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 45/304 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV----KSIIADDNKV----IDGVSASDFEASVLGKAI 52
MPELPEVE + +EE I K+I+ +++ + +K+ I + F +V GK I
Sbjct: 1 MPELPEVENIKFGLEEVVINKQILDMKYSNVVTESHKLNKMAIVKQDINYFSENVKGKTI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK----YS 108
R+GK L+ L+ + FGMTGA ++ VKD E +K +
Sbjct: 61 EKLSRRGKYLYFTLNEGYIIT-HFGMTGAFFL------------VKDISEITNKNYFKHQ 107
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
EL G +L ++D RRF ++R + D T P L P+ + F D L + K
Sbjct: 108 HVIFELSTGEKLIYSDIRRFGELRYIEDVTKFKPFVNLAPEPF-DKKAKKYFLDKLDENK 166
Query: 169 I---TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
+IKALLL+ + G GN EVLY+ KIHPL A LSK+ +L K + +++E
Sbjct: 167 YKDQSIKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKKKESLFKELVDILEL 226
Query: 226 ALEVGADSSQFPSNWI-----------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPE 274
A++ G + S+++ FH K K G ++ +T GR++ + P
Sbjct: 227 AIKEGGST---ISDYVHTDGGEGNMQNFHQIYGK--KVCPLGHDVENVTIKGRSSHFCPI 281
Query: 275 LQKL 278
QK+
Sbjct: 282 CQKI 285
>gi|441471260|emb|CCQ21015.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes]
gi|441474391|emb|CCQ24145.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes N53-1]
Length = 273
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K TIK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRTIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + K K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + ++ K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|383760975|ref|YP_005439957.1| formamidopyrimidine-DNA glycosylase [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381381243|dbj|BAL98059.1| formamidopyrimidine-DNA glycosylase [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 276
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + ++ G+ +V + + + I A F V G+ R+GK
Sbjct: 1 MPELPEVEVYVQELKPLLAGRTVVSARVFWP-RTIAFPDAETFAMQVAGQRFAQFGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L L+S MTG +Y+ + + P ++ ++LD+ +L
Sbjct: 60 YMLLHLESGATMIVHLRMTGRLYLV-------------EANTSPGPHTHVVMKLDNERQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F ++ L +P +V +++LGP+ T + F +L + +IKALLLDQS
Sbjct: 107 VFQDTRKFGRIWLTTEPMAV--LAKLGPEPFDPAFTDEAFARALRNRSASIKALLLDQSI 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
++G+GN ADE L++A+IHP + SL +E L + I++V+ + + A SS S
Sbjct: 165 VAGVGNIYADEALFRARIHPARPGGSLREEEVTALREAIRQVLSEGV-ANAGSSLGTSGL 223
Query: 241 IFHSREKKPGKAF---------------VDGKKIDFITAGGRTTAYVPELQ 276
+SR F V G I+ I R T + P Q
Sbjct: 224 QNYSRPGGAPGGFQEKFNVFRRTGQPCPVCGATIERIVVAQRGTHFCPRCQ 274
>gi|346313980|ref|ZP_08855504.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
2_2_44A]
gi|373121806|ref|ZP_09535673.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
21_3]
gi|422330007|ref|ZP_16411031.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
6_1_45]
gi|345907121|gb|EGX76837.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
2_2_44A]
gi|371655098|gb|EHO20454.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
6_1_45]
gi|371664785|gb|EHO29954.1| formamidopyrimidine-DNA glycosylase [Erysipelotrichaceae bacterium
21_3]
Length = 276
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 130/289 (44%), Gaps = 27/289 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E H + + ++ N +I A+ F ++GK I +R GK
Sbjct: 1 MPELPEVETVVRTLE-HQLDRVMITGCEVFWNNIIGYPDAATFCRDIVGKTIQGYYRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L + M G Y V+ E K+ ++L DG +L
Sbjct: 60 YMRFDLGDMEWIC-HMRMEGKFY-------------VQQPQEPYDKHVHVILQLSDGRQL 105
Query: 121 SFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K+ L D +S P +G DA E +T + +L KKK +KA+LLD
Sbjct: 106 RYHDTRKFGKMYLYEKRADVSSYPCFKNIGYDAFDERITAEWMYHTLHKKKTALKAVLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD----- 232
Q YI+GIGN ADE+ + +HP L K+ L+ I+ ++ A+ G
Sbjct: 166 QRYIAGIGNIYADEICFAMHMHPETMINHLRKKDFEELIYHIRRILNGAIRAGGTTIRSY 225
Query: 233 SSQFPSNWIFHSREK---KPGKAF-VDGKKIDFITAGGRTTAYVPELQK 277
+SQ + F + K K G+A V G I I R T + P Q+
Sbjct: 226 TSQLGVDGRFQLKLKVHAKKGEACPVCGTTIKKIVVATRGTCFCPTCQR 274
>gi|329929158|ref|ZP_08282944.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5]
gi|328936835|gb|EGG33270.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5]
Length = 277
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 131/292 (44%), Gaps = 35/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPELPEVE +R + + GK I + + ++I D + A F + G + R
Sbjct: 1 MPELPEVETVKRTLNQLIKGKHI-DHVSVNLPRIIQRPDDIEA--FAFMLKGHTVEGVER 57
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK L + LD S M G R V +E K++ DG
Sbjct: 58 RGKFLRILLDGLVLVS-HLRMEG-------------RYGVYRAEEPVEKHTHVIFHFSDG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL + D R+F + L + P+++LG + L + T F + + KK IKA+L
Sbjct: 104 TELRYKDVRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
L+Q+Y+ GIGN DE L++AKIHP + A SL L I + + +A++ G S
Sbjct: 164 LNQAYVVGIGNIYVDEALFRAKIHPERNANSLKDAELKRLYHAIVDTLSEAVDAGGSSIK 223
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F ++ + R+ KP A G I I GGR T Y P+ Q
Sbjct: 224 SYVNGQGEMGMFQNSHQIYGRKDKPCHAC--GGPIHKIVVGGRGTHYCPKCQ 273
>gi|403721060|ref|ZP_10944285.1| formamidopyrimidine-DNA glycosylase [Gordonia rhizosphera NBRC
16068]
gi|403207400|dbj|GAB88616.1| formamidopyrimidine-DNA glycosylase [Gordonia rhizosphera NBRC
16068]
Length = 329
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 117/249 (46%), Gaps = 29/249 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ IV + V + A+D +LG+ + HR+G
Sbjct: 1 MPELPEVETVRRGLAAHVEGRHIVAVEVLHPRSVRRQLGGAADLTGRLLGRPVAGVHRRG 60
Query: 60 KNLWLRL--DSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL + D+ FP GM+G + I + D D + + LDD
Sbjct: 61 KYLWLDIGADTDTFPLVVHLGMSGQMLI----------TRAGDPDH---VHLRIRATLDD 107
Query: 117 GLELSFTDKRRFAKVRL----------LNDPTSVPP--ISELGPDALLEPMTVDEFTDSL 164
G EL F D+R F + D TS P I+ + PD V ++
Sbjct: 108 GNELRFVDQRTFGGWHVDEYAEPAASRTPDTTSRLPDSIAHIAPDPFDPAFDVGAVIAAM 167
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
+ + IK +LLDQ+ ISG+GN ADE L++++IH + A LS+ L+ + V+
Sbjct: 168 AARHSEIKRVLLDQTVISGVGNIYADEALWRSRIHGGRGADRLSRAKLTELVAAVTAVMG 227
Query: 225 KALEVGADS 233
+AL VG S
Sbjct: 228 EALAVGGTS 236
>gi|345513657|ref|ZP_08793173.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4]
gi|229435463|gb|EEO45540.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4]
Length = 276
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE +R IE +G KI S+I + ++VI FE G+ I R+GK
Sbjct: 1 MPEMPEVETIKRIIEPQIVGVKI-DSVITNHSQVIAYPDMYRFEQETNGQTINKMSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-YSKFFVELDDGLE 119
L + DS MTG + + +P + ++ + L +G +
Sbjct: 60 YLTIHFDSGDRLILHLRMTGQLLVT--------------PHNYPMENHTHLIMNLSNGTQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D RR + L ND + +LG + L +T LSK+K IK +L D
Sbjct: 106 LRYIDVRRLGRFWLFGKNDIDDKSGLEKLGMEPLDNNLTAPYLVAHLSKRKRPIKEMLHD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-------- 229
Q+ I+GIGN +DE+L+ A I+P + LS + +L+ I+E+I ++E
Sbjct: 166 QTVIAGIGNIYSDEILHAAGIYPGKYCSDLSDKEWNSLVVKIREIIRNSIETNRMSPQEY 225
Query: 230 ----GADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
G + P ++ + ++ G I+ I GGR++ Y P QK
Sbjct: 226 LEGKGKEYRNMPYLRVYGQKGERCKNC---GSIIEKIVIGGRSSCYCPHCQK 274
>gi|383821033|ref|ZP_09976284.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium phlei RIVM601174]
gi|383334064|gb|EID12507.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium phlei RIVM601174]
Length = 284
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 109/239 (45%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H + K I + V +D A +LG I+ R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVVDKTITAVRVHHPRAVRRHEAGPADLTARLLGSRIVGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + I V + R A LDDG
Sbjct: 61 KYLWLTLDDGSALVVHLGMSGQMLIGEVPNANHLRIATL---------------LDDGTR 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L+F D+R F L + D + VP P++ L D L D L K IK
Sbjct: 106 LNFVDQRTFGGWMLTDMVSVDGSEVPLPVAHLARDPLDPRFDRDAVVKVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L++AKI+ + A SLS+ A LL +V+ AL G S
Sbjct: 166 LLDQTVVSGIGNIYADEALWRAKINGARVASSLSRPKLAALLDHAADVMRDALAQGGTS 224
>gi|300173771|ref|YP_003772937.1| formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG
18811]
gi|333446006|ref|ZP_08480948.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc inhae KCTC 3774]
gi|299888150|emb|CBL92118.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG
18811]
Length = 287
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 136/297 (45%), Gaps = 45/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE RR +E+ +G +I K I D I GV+ + F A
Sbjct: 1 MPELPEVETVRRGLEKLIVGGQITQVHLLYPKLINGDSQAFITGVTNASFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L LRL + M G QY +V+ + P K+++ E
Sbjct: 53 -IDRRGKYLLLRLSNGHTIVSHLRMEG----------QY---SVESIETRPYKHTEIIFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L D + + D RRF ++ L N + VP +++LGP+ + + +D D S+ K
Sbjct: 99 LLDQRRVFYNDTRRFGRMTLTNTHFEINDVPSLAKLGPEPTEKDLALDYMVDIFSRSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL--- 227
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP +L+ + L + I +++A+
Sbjct: 159 VKSFLLDQNQIAGIGNIYADEVLWQSKIHPETPTKTLTVRELSLLRENIIAEMKRAIAHH 218
Query: 228 --------EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V + QF + + R +P G + I G R T + P Q
Sbjct: 219 GTTVHSFSNVFGEVGQFQNELQAYGRVGQP--CLRCGTTMVKIKVGQRGTTFCPACQ 273
>gi|430835805|ref|ZP_19453792.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0680]
gi|430489167|gb|ELA65800.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0680]
Length = 278
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S ++G+GN DE L++AKIHP Q A +L + L + +V+++A+E G + +
Sbjct: 166 SLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSVIDVLDRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|421730687|ref|ZP_16169813.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|407074841|gb|EKE47828.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens subsp. plantarum
M27]
Length = 276
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 127/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T D + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEERIALPLSQLGPEPDDEAFTADYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP A SLS TL IK+ +++A++ G +
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + QK
Sbjct: 227 NSQGEIGMFQLKHYVYGKKDEPCKTC--GTMISKIVVGGRGTHFCARCQK 274
>gi|149912815|ref|ZP_01901349.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b]
gi|149813221|gb|EDM73047.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b]
Length = 283
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 133/291 (45%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G I + AD N+ + D + GK +LS R+
Sbjct: 1 MPELPEVETVRRGLTPAMEGAVIAR---ADVNRPDLRWPLPVDMATRLSGKTVLSLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + L S GM+G + + G + A P+K+ + +G
Sbjct: 58 KYILADLSSGETLLIHLGMSGRMTVSGDPL-----GAFHHDHPAPAKHDHVVFHMANGAR 112
Query: 120 LSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L++ P + P +++LGP+ L D+LS + IK+ LLD
Sbjct: 113 ITFNDPRRFGAMDLISTPKADTHPLLAKLGPEPLGNQFDESYLADALSGRNTPIKSALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q ++G+GN E LY+A+I P + A +LS+ A L+ I++V+ A+E G S +
Sbjct: 173 QRIVAGLGNIYVCEALYRARISPKRRARNLSRARAAALVPIIRDVLRDAIEAGGSSLRDF 232
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE P + I I GR++ Y Q+
Sbjct: 233 RQADGELGYFQHSFDVYDREGDPCRTPGCTGTITRIVQSGRSSFYCTLCQR 283
>gi|253577307|ref|ZP_04854625.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843311|gb|EES71341.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 285
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 127/290 (43%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + + +GK I +S+ ++I FEA + G IL R+G
Sbjct: 1 MPELPEVETVRRTLTQLIVGKTI-QSVHVFLPRIIQRPDDIRRFEAELAGHTILEIGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L + +D S M G R + E K++ DG E
Sbjct: 60 KFLRIIMDGLVLVS-HLRMEG-------------RYGLYQPGEEVEKHTHVIFRFTDGTE 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + L + + P+ +LG + L E T+ F D +S++ IK LL+
Sbjct: 106 LRYKDVRQFGTMHLFAPGEEFTNKPLVKLGLEPLEESFTLQAFQDKISRRTTKIKPALLN 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
Q YI G+GN DE L++A IHP A L+K L I E + +A+E G S
Sbjct: 166 QEYIVGLGNIYVDEALFRAGIHPEYPADKLTKRQLEQLHAAIVETLTEAVEAGGSSIKSY 225
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + R+ +P G+ + GGR T + P Q
Sbjct: 226 VNGQGEMGMFQHSLRMYGRQGEP--CLNCGQPVMKTVVGGRGTHFCPNCQ 273
>gi|339021284|ref|ZP_08645389.1| formamidopyrimidine-DNA glycosylase [Acetobacter tropicalis NBRC
101654]
gi|338751598|dbj|GAA08693.1| formamidopyrimidine-DNA glycosylase [Acetobacter tropicalis NBRC
101654]
Length = 279
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ G+ I +II + + ++DF + G+ ++ R+GK
Sbjct: 1 MPELPEVETVMRGMQIALQGRVIQTAIIRRYD--LRWRISADFSQRISGRKVIGFRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +RL GM+G I V D+D+ P + + DDG
Sbjct: 59 YILMRLAGDLSVILHLGMSGRI--------------VLDSDKAPVPHEHVVLVTDDGKRC 104
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + +L P + ++ +GP+ L + + L++K +IK +LLDQ
Sbjct: 105 AFVDPRRFGMIDVLPTPMEDTYRLLAGMGPEPLDADFSSSTLENGLARKNASIKTVLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++G+GN E L++A IHP A +L K+ L + I+ V+ +A+ G S
Sbjct: 165 KIVAGLGNIYVCEALFRAGIHPETPAGTLKKKQIRLLHEAIQSVLTEAIAAGGSSLKDYV 224
Query: 234 ------SQFPSNWIFHSREKK-----PGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F W ++R+ + PG +G + IT GR+T + P Q
Sbjct: 225 RPEGGLGYFQHAWKVYARKGQACPDCPGLPACEG--VQHITQAGRSTFFCPRHQ 276
>gi|441206732|ref|ZP_20973265.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis MKD8]
gi|440628430|gb|ELQ90229.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis MKD8]
Length = 285
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH GK I + V + +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + ++DT ++ + LDDG
Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLL----------GPIRDT-----RHLRIAAVLDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F +L D T VP P++ + D L D L K IK
Sbjct: 106 LSFVDQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQ+ +SGIGN ADE L++ KI+ + A +L + A LL EV+ AL G +
Sbjct: 166 LLDQTVVSGIGNIYADEALWRTKINGARIAAALPRRRLAELLDAAAEVMTDAL--GQGGT 223
Query: 235 QFPSNWI 241
F S ++
Sbjct: 224 SFDSLYV 230
>gi|401887317|gb|EJT51307.1| hypothetical protein A1Q1_07488 [Trichosporon asahii var. asahii
CBS 2479]
Length = 806
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 141/320 (44%), Gaps = 60/320 (18%)
Query: 5 PEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDF-----EASVLGKAILSAHRKG 59
PEVE ARR I E C G I K+ +D V DG S +F E+S L A+ K
Sbjct: 19 PEVERARRLIAETCTGYTIGKAETYEDTIVYDGASHDEFDVNARESSSSHTFNLEANFKI 78
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-----SAVKDTDEWPSKYSKFFVEL 114
+ R P + + G T Y+R V WP K + V
Sbjct: 79 LDYSFRRRQIP----SYALRHDRNDPGQEPTWYRRKVNLGEGVDGALLWPPKLTPPDVA- 133
Query: 115 DDGLELSFTDKRRFAKVRLLNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+ EL+F D RR ++RL+ DP S PP+S LG D +L ++DEF L K+ T+K
Sbjct: 134 GEARELAFLDPRRLGRLRLVPDPVLSHPPLSLLGFDPVLSHPSLDEFKGLLENKRGTVKG 193
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
L++DQ++ +G+GNWVADE + + + Q+ + + A + ADS
Sbjct: 194 LIMDQAFSAGVGNWVADECVPRIVLADWQSPLPSAHPPAAP---------DSGSRRSADS 244
Query: 234 SQFPSNWIFHSR---------------------EKKPGKAFV------------DGK--K 258
+ FP+NW+F R E+ A V DG
Sbjct: 245 ALFPTNWLFKWRWGKGAKKKKKAVSSTNGDVKVEQPAFLALVGNIVTIVTDVEPDGSPAT 304
Query: 259 IDFITAGGRTTAYVPELQKL 278
I F+T GGRT+A V ELQK+
Sbjct: 305 ITFVTVGGRTSAVVTELQKM 324
>gi|118470267|ref|YP_886759.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
MC2 155]
gi|399986772|ref|YP_006567121.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
MC2 155]
gi|166215635|sp|A0QV21.1|FPG_MYCS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|118171554|gb|ABK72450.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
MC2 155]
gi|399231333|gb|AFP38826.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
MC2 155]
Length = 285
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 113/247 (45%), Gaps = 23/247 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH GK I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + ++DT ++ + LDDG
Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLL----------GPIRDT-----RHLRIAAVLDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F +L D T VP P++ + D L D L K IK
Sbjct: 106 LSFVDQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQ+ +SGIGN ADE L++ KI+ + A +L + A LL EV+ AL G +
Sbjct: 166 LLDQTVVSGIGNIYADEALWRTKINGARIAAALPRRRLAELLDAAAEVMTDAL--GQGGT 223
Query: 235 QFPSNWI 241
F S ++
Sbjct: 224 SFDSLYV 230
>gi|84684525|ref|ZP_01012426.1| Formamidopyrimidine-DNA glycolase [Maritimibacter alkaliphilus
HTCC2654]
gi|84667504|gb|EAQ13973.1| Formamidopyrimidine-DNA glycolase [Maritimibacter alkaliphilus
HTCC2654]
Length = 283
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 24/292 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G +I ++ + + + + G +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPVMTGHRIARAEVRREG--LRWPFPERMAERLTGATVLGLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS--KYSKFFVELDDGL 118
+ LD+ GM+G I I G + ++ E P+ K+ +++D G
Sbjct: 59 YILADLDTNETCLIHLGMSGRILISGTTLGKFH-------HEHPATEKHDHVVLDMDGGA 111
Query: 119 ELSFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
++ D RRF + L T P I+ LGP+ L L+ K IK+ LL
Sbjct: 112 RITLNDARRFGVMDLFTTGTGDLHPLIAALGPEPLGNEFNEGYLIAKLAGKNTPIKSALL 171
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
DQ ++G+GN E LY+A IHP + A +S A+L+ I++V+ +A+ G S +
Sbjct: 172 DQRIVAGLGNIYVCEALYRAGIHPARKAGRISAARIASLVPIIRDVLAEAIAAGGSSLRD 231
Query: 236 ----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + +E +P K KI I GR++ Y P Q+
Sbjct: 232 YRQADGELGYFQHTFRVYDQEGQPCKTPECQAKIARIVQSGRSSFYCPTCQR 283
>gi|395242567|ref|ZP_10419564.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pasteurii CRBIP
24.76]
gi|394480299|emb|CCI85804.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pasteurii CRBIP
24.76]
Length = 276
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 38/295 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK------SIIADDNKVIDGVSASDFEASVLGKAILS 54
MPE+PEVE RR + +GK I K +II+ D++ +F+ ++GK IL+
Sbjct: 1 MPEMPEVETVRRTLTPLAVGKVIKKVDLWYPNIISSDHR--------EFKNKLVGKKILA 52
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R K L +RL M G Y+ A + K V+ E
Sbjct: 53 IDRYAKFLLIRLSEDLTIVSHLRMEGKYYLSLPATPKDKHDHVQ-------------FEF 99
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
DG L + D R+F +++L+ + V I++LGP+A T+D F L+K+ IK
Sbjct: 100 TDGTSLRYNDVRKFGRMQLVETGSEKIVTGIAKLGPEADSPEFTLDYFYAGLNKRHKNIK 159
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
+LLDQS +SG+GN DEVL+ +KIHPL + K+ A L I IE+A++
Sbjct: 160 NVLLDQSLVSGLGNIYVDEVLWSSKIHPLSICNKIPKDKVAILRDEINHTIEEAIKYKGT 219
Query: 233 S--SQFPSN---WIFHSREKKPGKAFVDGK----KIDFITAGGRTTAYVPELQKL 278
+ + +N + +R K G A + K++ I GR T + P Q +
Sbjct: 220 TVHTYLDANGDTGHYQNRLKAYGHAGEKCRRCQSKLEKIKVSGRGTTFCPNCQVM 274
>gi|380302782|ref|ZP_09852475.1| formamidopyrimidine-DNA glycosylase Fpg [Brachybacterium squillarum
M-6-3]
Length = 335
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 137/316 (43%), Gaps = 40/316 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G+ + + D + D +LG I + R+G
Sbjct: 1 MPELPEVEVVRRGLEPHVLGRTVTGLELLDARIIRRQHGGEDRLRDGLLGARIDAVARRG 60
Query: 60 KNLWLRLDSPPFPS------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS----KYSK 109
K LWLRL P GM+G + ++GV +AV E P+ ++ +
Sbjct: 61 KFLWLRLSEPDGGDRGDALVAHLGMSGQLRLRGVLPEPGDPAAVPAPSEGPASDPLRHRR 120
Query: 110 FFVELDDGLELSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSL--- 164
+ LDDG L D+R F + L++ P PDALL D D L
Sbjct: 121 LTLTLDDGARLDMIDQRLFGGIWTSPLDEAADGRPAGRGNPDALLPRDARDIARDLLDPA 180
Query: 165 ----------SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCAT 214
++ +K+LLL Q +SGIGN ADE L+QA+ LS+
Sbjct: 181 ADLPGIARAIRARRAPVKSLLLSQGIVSGIGNIYADEGLWQARTRYDTPGSLLSQRRALA 240
Query: 215 LLKCIKEVIEKALEVGAD------------SSQFPSNWIFHSREKKPGKAFVDGKKIDFI 262
+L+ ++V+E+ALEVG S F + + R+ +P GK I
Sbjct: 241 ILRGTRDVMERALEVGGTSFDALYVNVDGRSGYFARSLAVYGRDGEPCPRC--GKLIARA 298
Query: 263 TAGGRTTAYVPELQKL 278
GR++ + P Q++
Sbjct: 299 VHQGRSSHFCPGCQRI 314
>gi|385677311|ref|ZP_10051239.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis sp. ATCC 39116]
Length = 259
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 33/283 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + H +GK+I + D V+ GVSA ++ + R+GK
Sbjct: 1 MPELPDVEGFRRTLAAHGVGKRIT-GVTTLDAGVLRGVSARRLRETLRHQRFGEPRRRGK 59
Query: 61 NLWLRLDS-PPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-----SKYSKFFVEL 114
L + +D P FGMTG++ EW +++ +
Sbjct: 60 WLIVPVDGRPATMVLHFGMTGSL-------------------EWSELDDRNRHDRVIFAF 100
Query: 115 DDGLELSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DDG EL + D R+ +RLL D +++ GPDAL P + F L +++ IK
Sbjct: 101 DDG-ELRYRDMRKLQGLRLLAGDAELDRLLADTGPDALDVPK--ERFRVLLGRRR-GIKQ 156
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LL DQ+ ++G+GN +ADE+L++A++ P A L + L + ++EV+ A++ G
Sbjct: 157 LLTDQAVLAGLGNLLADEILWRARLAPRVRAADLDGTAADRLHREMREVLRAAVKAGRVP 216
Query: 234 SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ + W+ R++ G G ++ GGR T + P Q
Sbjct: 217 PR--TTWLTGRRDEPSGTCPRCGTVLEHGRVGGRGTVWCPRCQ 257
>gi|409349128|ref|ZP_11232673.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus equicursoris CIP
110162]
gi|407878400|emb|CCK84731.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus equicursoris CIP
110162]
Length = 275
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 133/289 (46%), Gaps = 27/289 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I + + D ++ V + F+ + GK I R GK
Sbjct: 1 MPEMPEVETVRRTLTPLAAGKTIKRVDVWYDKVIVGDVKS--FQQQLKGKTIEKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL S M G +Y+ + D K+ DG L
Sbjct: 59 YLLFRLGDLTIVS-HLRMEG----------KYRLTT---ADAPREKHEHLQFVFTDGSAL 104
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T V I LGP+AL T D F +L K IK LLLDQ
Sbjct: 105 RYDDVRKFGRLQLVETGTERIVTGIKHLGPEALSPEFTEDYFAKALKNKTKKIKNLLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN DEVL+QAKI+P+ L+K+ L + I I++A ++G +
Sbjct: 165 TVVAGLGNIYVDEVLWQAKINPVAEPKDLTKQQVQDLYEAINSTIKEATKLGGTTVHSFL 224
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKL 278
N + R + G+A D G+K+ I GR T Y P Q+L
Sbjct: 225 NAEGQAGGYQDRLEVYGRAGEDCLRCGEKLVKIKVNGRGTTYCPNCQRL 273
>gi|430749586|ref|YP_007212494.1| formamidopyrimidine-DNA glycosylase Fpg [Thermobacillus composti
KWC4]
gi|430733551|gb|AGA57496.1| formamidopyrimidine-DNA glycosylase Fpg [Thermobacillus composti
KWC4]
Length = 310
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 137/310 (44%), Gaps = 31/310 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE R + GK I +++ ++I + F A++ G+ I S R+G
Sbjct: 1 MPELPEVETVARTLNALVAGKTI-RAVTVRLPRIIQRPEEPEAFAAALEGRTIRSIGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L LD + + ++G R +V DE K++ L DG +
Sbjct: 60 KFLRFVLDD-------LVLVSHLRMEG-------RYSVCPADEPIEKHTHVLFHLTDGTD 105
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + L + PP+S+LG + L + TV+ L +K IK LLL+
Sbjct: 106 LRYKDVRQFGTMHLFRPGEEFEQPPLSKLGMEPLDDAFTVEALRKLLGGRKAPIKPLLLN 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
Q+Y++G+GN DE L++A IHP + A SL L I+E + +A++ G S
Sbjct: 166 QAYVTGLGNIYVDESLHKAGIHPERPASSLRAAEWTRLHASIRETLREAVDAGGSSVRSY 225
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKA 286
F + RE +P + G I GGR T P Q + +
Sbjct: 226 VNGQGEMGMFQFRLYVYGREDEPCRTC--GTPIVKTVLGGRGTHVCPVCQPYRKARGRRP 283
Query: 287 VGKPRKQAPK 296
GK P+
Sbjct: 284 AGKAPAAIPR 293
>gi|227534793|ref|ZP_03964842.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227187549|gb|EEI67616.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 295
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++ I + R+G
Sbjct: 14 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVSSEITTIDRRG 70
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 71 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 118
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ V +++LGP+ P T DE F L + IK++L
Sbjct: 119 LRYRDLRKFGRMRLIKTGQEDQVTALAKLGPEP--TPSTFDEADFAQRLKRHHKPIKSVL 176
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 177 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 236
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 237 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 289
>gi|375142898|ref|YP_005003547.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium rhodesiae
NBB3]
gi|359823519|gb|AEV76332.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium rhodesiae
NBB3]
Length = 296
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 119/247 (48%), Gaps = 12/247 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H + K I + V + +D A +L I+ R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVVDKTISAVRVHHPRAVRRHEAGPADLTARLLNSRIVGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + I G + R ++ E + + LDDG
Sbjct: 61 KYLWLTLDDGCALVVHLGMSGQMLI-GAPTSARARRGQREPRE---DHLRIAALLDDGTA 116
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D T VP P++ + D L D L +K IK
Sbjct: 117 LSFVDQRTFGGWMLADVVTVDGTEVPMPVAHIARDPLDPDFNRDGVVTVLRRKHSEIKRQ 176
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQ+ +SG+GN ADE L++AKI+ + A SL++ +L +V+ +AL G +
Sbjct: 177 LLDQTVVSGVGNIYADEALWRAKINGARLASSLTRAKLGEVLDAATDVMTEAL--GQGGT 234
Query: 235 QFPSNWI 241
F S ++
Sbjct: 235 SFDSLYV 241
>gi|388456011|ref|ZP_10138306.1| DNA-formamidopyrimidine glycosylase [Fluoribacter dumoffii Tex-KL]
Length = 268
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+V+ + KKI + +D +I D + ++ + A R+GK
Sbjct: 1 MPELPDVQGFVNYFNHTALDKKIA-MVSCNDEDLIKNTRCPDLQQALHHQQFRQASRRGK 59
Query: 61 NLWLRLD-SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L +P F FGMTG + I G ++ + KY++ +E +D +
Sbjct: 60 YLIAEFKKAPHVLVFHFGMTGNL-IFGEKLSPNE-----------MKYARLVIEFEDHSQ 107
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSK-KKITIKALLLDQ 178
L F D R+F K+ L +P + + ++GP+ L ++ EF++ L+K ++ IK+ L+DQ
Sbjct: 108 LIFKDVRQFGKIWLAKNPLEINALKKMGPEPL--NLSHKEFSELLAKHQQQNIKSFLMDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-----GADS 233
I+GIGN ++E+L+Q+ I P Q + +E + L ++ ++ KA+E+ A
Sbjct: 166 EIIAGIGNEYSNELLFQSTIDPHQKIKDIDEEKRSKLYSDMQTILAKAIEIRKKNKDARK 225
Query: 234 SQFPSNW-IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
P +W +FH +E K K K+ T GR+ + P+ Q+
Sbjct: 226 KDLPEDWLLFHQKEMKCPKN--PNHKLKRETIAGRSAIFCPQHQR 268
>gi|335430395|ref|ZP_08557289.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Haloplasma contractile SSD-17B]
gi|334888162|gb|EGM26466.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Haloplasma contractile SSD-17B]
Length = 290
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADD--NKVIDGVSASDFEASVLGKAILSAHRK 58
+PELPEVE R+ + K + KSI A D + I S F+ +++ + I R+
Sbjct: 2 LPELPEVETVRQTLR----TKILDKSIKAVDILYEPIIKTDLSHFKQTIINQTINEIERR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK + ++LD S M G YI R+++ +T SK+ LDDG
Sbjct: 58 GKYILIKLDDHYLIS-HLRMEGKYYI---------RNSLHET----SKHEHVIFHLDDGT 103
Query: 119 ELSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L + D R+F + L L + P+ +LG + E +T L K K IK LL
Sbjct: 104 QLRYHDVRKFGTMHLKSLEEVHIGEPLEKLGYEPHDELLTFSYLKPKLKKSKRPIKTALL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS--- 233
DQ+ I+G+GN DEV++ +K+HP Q+A SLS +++ K+VI KA+++G +
Sbjct: 164 DQTIIAGLGNIYVDEVIFLSKLHPEQSADSLSDRDIKQIIQASKQVIIKAIKLGGTTIRS 223
Query: 234 --------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+F + H R+ +P + I + GGR T P QK+
Sbjct: 224 YTSEEGVHGRFQNELTVHMRKDEP--CITCKETIIKMKVGGRGTYICPNCQKI 274
>gi|354559459|ref|ZP_08978708.1| Formamidopyrimidine-DNA glycosylase [Desulfitobacterium
metallireducens DSM 15288]
gi|353542355|gb|EHC11818.1| Formamidopyrimidine-DNA glycosylase [Desulfitobacterium
metallireducens DSM 15288]
Length = 273
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 133/290 (45%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H I ++ ++ ++ + G FE V G+ ILS R+GK
Sbjct: 1 MPELPEVETIRRTLCQH-ILQQTIEDVLIRWPGAVKGWDIFPFEQGVKGRRILSVDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD MTG + G + E P K++ +L +G EL
Sbjct: 60 YLLFHLDEDWSLLAHMRMTGRLNFYG------------ELRE-PEKHTHVVFKLSNG-EL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F ++ L+ + + P I LGP+ L E T + L K+ + +K LLDQ
Sbjct: 106 HFTDTRKFGRIMLVPTQECSQHPSICILGPEPLEEDFTPQVLGERLKKRSVALKIALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++G+GN DE L++AK+ P + A SLS++ L I+ V++ ++ S
Sbjct: 166 KVVAGLGNIYVDESLFRAKLSPERAANSLSRKELKALHAAIRIVLQAGIDAQGTSFRDYR 225
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R + K G + I GGRTT + QK
Sbjct: 226 DANGEKGNFQRALQVYGRGGE--KCTHCGSSLVRIRLGGRTTVFCTHCQK 273
>gi|403510496|ref|YP_006642134.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis alba ATCC
BAA-2165]
gi|402798747|gb|AFR06157.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis alba ATCC
BAA-2165]
Length = 286
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 19/238 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H +G++I + + V+ +DF + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLVDHAVGRRIGDVEVLHPRSIRRHVAGPADFAGRLEGRTPTAVRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K +WL LDS GM+G + ++ Q K DE K+ + + L DG E
Sbjct: 61 KYMWLVLDSGEMLLTHLGMSGQMLVQ----PQGK------PDE---KHLRVRLPLADGNE 107
Query: 120 LSFTDKRRFAKVRLLNDP---TSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L F D+R F + L+++P VP + + D L + F +L K+ +K L
Sbjct: 108 LRFVDQRTFGHL-LVDEPGERVEVPASVDHIALDPLDPEFVPEVFVRALRAKRTEVKRAL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LDQS ISG+GN ADE L+++++H ++ L + LL + +V+ +ALEVG +
Sbjct: 167 LDQSLISGVGNIYADEALWRSRLHWARSTRGLDTAAALELLGHVTDVMSEALEVGGTT 224
>gi|256617749|ref|ZP_05474595.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200]
gi|256597276|gb|EEU16452.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200]
Length = 280
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ V G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQVAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|116495189|ref|YP_806923.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei ATCC 334]
gi|418002397|ref|ZP_12642515.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UCD174]
gi|116105339|gb|ABJ70481.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Lactobacillus casei ATCC 334]
gi|410544053|gb|EKQ18391.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei UCD174]
Length = 282
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR++ + K++ +I + K+ I+G++ F+ ++ I + R+G
Sbjct: 1 MPELPEVETVRRSLLP-LVKNKVITAINTNWEKILINGLAT--FQKEIVSSEITTIDRRG 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L +RL + M G Y+ VKD + K+ DG +
Sbjct: 58 KYLLMRLSNGETIISHLRMEGRYYV------------VKDANTPFDKHDHVTFTFQDGSQ 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++RL+ V +++LGP+ P T DE F L + IK++L
Sbjct: 106 LRYRDLRKFGRMRLIKTGQEDQVTALAKLGPEP--TPSTFDEADFAQRLKRHHKPIKSVL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ+ ++G+GN ADEVL+ ++++PLQ A +L + TL I + + A+ G S+
Sbjct: 164 LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH 223
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE P G I I G R T Y P Q L+
Sbjct: 224 TYVDAEGNRGSFQNALHVYDREGTPCDRC--GTTIVKIKVGQRGTHYCPHCQPLH 276
>gi|433647038|ref|YP_007292040.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium smegmatis
JS623]
gi|433296815|gb|AGB22635.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium smegmatis
JS623]
Length = 285
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ I + V + +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTITAVRVHHPRAVRRHEAGPADLTARLLDAKITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-YSKFFVELDDGL 118
K +WL LD GM+G + + E P++ + + LDDG
Sbjct: 61 KYMWLTLDDESALVVHLGMSGQMLLG----------------ELPNENHLRIATLLDDGT 104
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D T VP P++ L D L D L +K IK
Sbjct: 105 ALSFVDQRTFGGWMLADLVTVDGTDVPMPVAHLARDPLDPAFNRDGVVTVLRRKHSEIKR 164
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L++A+I+ + A SLS+ A LL EV+ AL G
Sbjct: 165 QLLDQTVVSGIGNIYADEALWRARINGARLASSLSRAKLAELLDAAAEVMSDAL--GQGG 222
Query: 234 SQFPSNWI 241
+ F S ++
Sbjct: 223 TSFDSLYV 230
>gi|257898349|ref|ZP_05678002.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15]
gi|257836261|gb|EEV61335.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15]
Length = 278
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPLFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+ +A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLCPKEIEQLRLSIIDVLNRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKIKVAQRGTHYCPNCQRL 274
>gi|227551618|ref|ZP_03981667.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium
TX1330]
gi|257895779|ref|ZP_05675432.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12]
gi|227179295|gb|EEI60267.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium
TX1330]
gi|257832344|gb|EEV58765.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12]
Length = 278
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFVAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+ +A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKIKVAQRGTHYCPNCQRL 274
>gi|149186671|ref|ZP_01864982.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21]
gi|148829579|gb|EDL48019.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21]
Length = 260
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 17/277 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE EA R +E C+ + I + +D I+ + + A ++G+ R GK
Sbjct: 1 MPELPENEAQRLTLERECLHRTIEAVELGEDVTYIE-LPGDNERARLVGRQFTETRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N++ + P+ + GMTG + ++K + + L
Sbjct: 60 NIFAGSKTGPWMTVHLGMTGKLVPFDAPDDP-------------PDHTKLLIRFEGDRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F R+ VR+++DP S LGPDAL ++ ++F + + IK+ L+ Q
Sbjct: 107 AFQCPRKLGHVRVIDDPASYLEDEGLGPDAL--EVSCEQFVQTFGSTRSAIKSALMKQDK 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
++GIGN +DE L+Q IHP A +L ++ + + ++ +++ + V A P W
Sbjct: 165 MAGIGNLWSDETLFQTGIHPEARANALGEDVLSDIHAAMRRILKGVVRVEASYEDLPEAW 224
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ R K + G I GGRT + + QK
Sbjct: 225 LIRHR-KSGAECRRCGGTIVSTKVGGRTAYFCDKHQK 260
>gi|124005766|ref|ZP_01690605.1| formamidopyrimidine-DNA glycosylase N-terminal domain family
[Microscilla marina ATCC 23134]
gi|123988834|gb|EAY28440.1| formamidopyrimidine-DNA glycosylase N-terminal domain family
[Microscilla marina ATCC 23134]
Length = 265
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 43/288 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAH---- 56
MPELPEVE ++ E + +K+V+ IAD GV A E K + H
Sbjct: 1 MPELPEVERFKQYFEGTALHQKVVQVEIADA-----GVLACTAETL---KEVAEKHTFDK 52
Query: 57 --RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R GK L++ + FGM+G++ +Y R P ++ + L
Sbjct: 53 TDRIGKYLFIETSADKVLMIHFGMSGSL--------KYYRDD-------PPRFGRVVFHL 97
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+G L+F R+F ++ + ++ + +L DA M+ +EF + + +K IK L
Sbjct: 98 ANGFHLAFDCPRKFGRIDVADNVKAYQAKKKLSTDAY--KMSWEEFEQNTAGRKGLIKPL 155
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LL+Q +G+GNW+ADE+L+QA++HP LSK + ++++++ A+ A+ +
Sbjct: 156 LLNQQVAAGVGNWIADEILFQARVHPETRTNKLSKNELRLVYDKMRDILQTAVSHEANYN 215
Query: 235 QFPSNWIFHSR-------EKKPGKAFVDGKKIDFITAGGRTTAYVPEL 275
+P ++ H R E P G K+ ++ GGR T Y+ E+
Sbjct: 216 HYPKDYFIHRRGWTDQNTENCPNC----GTKVHYMKVGGRAT-YLCEV 258
>gi|431762026|ref|ZP_19550588.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3548]
gi|430624718|gb|ELB61368.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3548]
Length = 278
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+ +A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIHCGTPIVKIKVAQRGTHYCPNCQRL 274
>gi|379058022|ref|ZP_09848548.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Serinicoccus profundi MCCC 1A05965]
Length = 302
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 34/254 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS--DFEASVLGKAILSAHRK 58
MPELPEVE RR + EH +G++I + + ++V +A D A V G +L A R+
Sbjct: 1 MPELPEVEVVRRGLAEHVVGRRIETATLTG-HRVARRHAAGPGDLTARVAGATVLEADRR 59
Query: 59 GKNLWLRL----DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
GK LWL L D P GM+G + ++ + K + T ++
Sbjct: 60 GKYLWLVLQAPGDDPQALVVHLGMSGQLLVEAADAPREKH--LHATLDF----------A 107
Query: 115 DDGLELSFTDKRRFAKVRLLN-------DPTS-------VP-PISELGPDALLEPMTVDE 159
DDG +L F D+R F + L DP+ +P P+ + PD L +
Sbjct: 108 DDGPQLRFVDQRTFGGLALTPLHPDRAPDPSGAGGHAHGIPEPVLHIAPDPLEDAFDRPG 167
Query: 160 FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
+ K + IK LLLDQ +SGIGN ADE L++A++H + A +L++ + LL
Sbjct: 168 VIRRMKAKDVAIKRLLLDQGLVSGIGNIYADEALWRAQVHGRRPAAALTRPALGRLLDHA 227
Query: 220 KEVIEKALEVGADS 233
EV+ AL G S
Sbjct: 228 AEVMRAALGQGGTS 241
>gi|293569013|ref|ZP_06680326.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071]
gi|291588446|gb|EFF20281.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071]
Length = 278
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+++A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRSKEVEQLRLSIIDVLDRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|126734088|ref|ZP_01749835.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2]
gi|126716954|gb|EBA13818.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2]
Length = 283
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE + I G I + AD N+ + + + GK +L R+
Sbjct: 1 MPELPEVETVKAGIAPVMEGHVIAQ---ADVNRPDLRWPFPAQMAKRLTGKRVLGLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + LDS GM+G + I G V ++ P+K+ +DDG
Sbjct: 58 KYILVDLDSAETLLIHLGMSGRMLISGHTVGEFHHP-----HPVPAKHDHVVFHMDDGAR 112
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ T I +LGP+ L + L + IK+ LLD
Sbjct: 113 ITFNDARRFGAMDLMETATQDDHWLIRDLGPEPLGNAFNESYLIERLKGRNTPIKSALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q +SG+GN EVL++A IHP + A +S ATL+ I++V+ +A+ G S +
Sbjct: 173 QRIVSGLGNIYVCEVLFRAGIHPARKAGRISAARVATLVPLIRDVLSEAIAAGGSSLRDY 232
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE +P + I I GR++ + P+ Q+
Sbjct: 233 RQSDGELGYFQHVFQVYDREGEPCVTPGCDRTITRIVQSGRSSFFCPQCQR 283
>gi|293400878|ref|ZP_06645023.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|373451726|ref|ZP_09543645.1| formamidopyrimidine-DNA glycosylase [Eubacterium sp. 3_1_31]
gi|291305904|gb|EFE47148.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|371967947|gb|EHO85414.1| formamidopyrimidine-DNA glycosylase [Eubacterium sp. 3_1_31]
Length = 276
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 127/291 (43%), Gaps = 31/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E H +G +K + +I + F A + GK I R GK
Sbjct: 1 MPELPEVETVVRTLE-HQLGNVTIKDCHVLWDNIIAYPTPQTFCAQIKGKTIQHYERYGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S + + M G YI+ +DE K+ +L DG +L
Sbjct: 60 YLLFDLGSMMWIA-HMRMEGKFYIQ-------------KSDEPYDKHVHVLFDLQDGRQL 105
Query: 121 SFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K+ L D P +G DA E +T +L K+KI +KA LLD
Sbjct: 106 RYHDTRKFGKMYLYEKRKDIHQYPCFQNIGLDAFDERLTPTYLYHALHKRKIVLKAALLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
QS I+GIGN ADE+ + +HP L K+ LL+ + +++ A+ G +
Sbjct: 166 QSVIAGIGNIYADEICFALGMHPETKIYHLRKKDFERLLQETRRILQGAIRYGGTTIRSY 225
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+F H+ KK K V +I IT R T Y P Q+
Sbjct: 226 TSSLGVDGRFQLKLKVHA--KKGEKCPVCQGEIKKITVATRGTCYCPTCQR 274
>gi|257884460|ref|ZP_05664113.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501]
gi|257887243|ref|ZP_05666896.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733]
gi|293377606|ref|ZP_06623795.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1]
gi|293571801|ref|ZP_06682817.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980]
gi|430841378|ref|ZP_19459297.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1007]
gi|431032968|ref|ZP_19490814.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1590]
gi|431071630|ref|ZP_19494601.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1604]
gi|431106076|ref|ZP_19497233.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1613]
gi|431737601|ref|ZP_19526554.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1972]
gi|431740031|ref|ZP_19528950.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2039]
gi|431751984|ref|ZP_19540670.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2620]
gi|257820298|gb|EEV47446.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501]
gi|257823297|gb|EEV50229.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733]
gi|291608055|gb|EFF37361.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980]
gi|292643606|gb|EFF61727.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1]
gi|430494154|gb|ELA70404.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1007]
gi|430564069|gb|ELB03253.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1590]
gi|430567263|gb|ELB06349.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1604]
gi|430569608|gb|ELB08598.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1613]
gi|430598688|gb|ELB36423.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1972]
gi|430604158|gb|ELB41658.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2039]
gi|430614593|gb|ELB51573.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2620]
Length = 278
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+ +A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKIKVAQRGTHYCPNCQRL 274
>gi|291454393|ref|ZP_06593783.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus
J1074]
gi|359148734|ref|ZP_09181841.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces sp. S4]
gi|421739405|ref|ZP_16177715.1| formamidopyrimidine-DNA glycosylase Fpg [Streptomyces sp. SM8]
gi|291357342|gb|EFE84244.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus
J1074]
gi|406692178|gb|EKC95889.1| formamidopyrimidine-DNA glycosylase Fpg [Streptomyces sp. SM8]
Length = 286
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF + G + R+G
Sbjct: 1 MPELPEVEVVRRGLERWITGRSVASADVLHPRAVRRHLAGGEDFARRLTGLRFAAPLRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL +D PF GM+G + ++ K V+ +++ D G
Sbjct: 61 KYLWLPVDDAPFAVLAHLGMSGQLLVQPGEAPDEKHLRVR------LRFAD-----DLGT 109
Query: 119 ELSFTDKRRFAKVRLLND-PTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
EL F D+R F + L + P +P I+ + D L D F +L +++ T+K LL
Sbjct: 110 ELRFVDQRTFGGLSLHDTGPDGLPDVIAHIARDPLDPLFDEDAFHQALRRRRTTVKRALL 169
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQS ISG+GN ADE L+++++H + +L++ A LL I+ V+ AL+VG S
Sbjct: 170 DQSLISGVGNIYADEALWRSRLHYDRPTATLTRPRSAELLTHIRAVMTAALDVGGTS 226
>gi|306490830|gb|ADM94950.1| formamidopyrimidine-DNA glycosylase [uncultured candidate division
JS1 bacterium]
Length = 280
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ I K+I K I + ++I + +F + G I R+GK
Sbjct: 1 MPELPEVETIRRDLEKKVINKRINK-IKVNLPRLIKKPTIDEFSRRLKGTYITKVSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-------SKYSKFFVE 113
+ L+S F GM+G + + +T+E P K+ F
Sbjct: 60 YILCFLNSGECLVFHLGMSGCL--------------LYETNELPISIIDINKKHFHVFFF 105
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+D ++ + D R+F K+ LL + + LG + L E T+D+FT + KK IK+
Sbjct: 106 FEDNTKMIYNDVRQFGKIWLLKKDDKLTEVESLGLEPLEEDFTIDKFTRIIENKKSNIKS 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
L+++Q +I+GIGN A+E+L++A IHPL+ + SL+ L IK+ + KA+
Sbjct: 166 LIMNQKHIAGIGNIYANEILFRAGIHPLRRSNSLTTHEIKKLYYSIKDTLAKAV 219
>gi|328957054|ref|YP_004374440.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4]
gi|328673378|gb|AEB29424.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4]
Length = 278
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 31/292 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE R+ +E+ + + ++S+ +++I G + ++F+ ++G+ I+ R+G
Sbjct: 1 MPELPEVETVRKGLEK-LVSEATIESVDIYWDRIISGPIETTEFKRILMGEKIMEFDRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + +R Q+ + + ++G + V+++ K++ L DG +
Sbjct: 60 KYIIIRFK-------QWALVSHLRMEG-------KYEVEESSAPLKKHTHVVFHLADGRD 105
Query: 120 LSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKITIKALL 175
L + D R+F ++ L + + + I LGP+ +E T DE F +L KK IK LL
Sbjct: 106 LRYLDVRKFGRMTLVPIGEEFTATGIKLLGPEPTVE--TFDEAIFYKTLQTKKRAIKPLL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ ++G+GN DE L+ AK+HPL+TA SL K + L + I +V+ A+E G + +
Sbjct: 164 LDQKIVAGLGNIYVDEALFLAKMHPLRTANSLQKNEVSLLHEAIIKVLGDAVEAGGTTIR 223
Query: 236 FPSNWI-----FHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKL 278
N + F + GK G I+ I R T + P Q+L
Sbjct: 224 TYQNALGEAGSFQVKLSVYGKKGLPCIRCGTPIEKIKVAQRGTHFCPNCQRL 275
>gi|163790756|ref|ZP_02185182.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7]
gi|159873936|gb|EDP68014.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7]
Length = 279
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 144/294 (48%), Gaps = 27/294 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE R+ +E+ +G I KS+ +++I G + +++F+ ++G+ I R+G
Sbjct: 1 MPELPEVETVRKGLEKLVLGATI-KSVDVYWDRIIAGSIESTEFKQLLIGEKITGFDRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + + + + ++G + V+++ K++ L DG +
Sbjct: 60 KYIVFHFKN-------WALVSHLRMEG-------KYEVEESTVPLKKHTHVVFHLADGRD 105
Query: 120 LSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++ L L + S+ I LGP+ E F ++L KK IK LLLD
Sbjct: 106 LRYLDVRKFGRMTLVPLGEEYSMTGIRLLGPEPTKEAFDETTFFNTLLTKKRAIKPLLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q ++G+GN DE L+ AKIHPL+ A SL K+ + L + I +V+ A++ G + +
Sbjct: 166 QKIVAGLGNIYVDEALFAAKIHPLRMANSLKKQEVSQLHEAIIKVLGDAVKAGGTTIRTY 225
Query: 238 SNWI-----FHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
N + F + GK G I+ I R T + P Q L VQ
Sbjct: 226 QNALGEAGKFQVKLSVYGKKGIPCIRCGTPIEKIKVAQRGTHFCPHCQLLTSVQ 279
>gi|404328595|ref|ZP_10969043.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 279
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + E IGK + I + + + F ++G+ + R+GK
Sbjct: 1 MPELPEVETVKRTLNELVIGKTVANVEIRWPHIIRRPQDSRQFARLLIGETLHHVGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L D S M G +Y+ +++E P +Y+ DG
Sbjct: 61 FLLLCFDDEVVVS-HLRMEG----------RYR----LESEEVPVDRYTHVIFHFTDGTA 105
Query: 120 LSFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKI-TIKALLL 176
L + D R+F + L P+S+LGP+ P+ D F S+ +K IK LLL
Sbjct: 106 LRYRDVRKFGTMHLFEKGREWDSLPLSKLGPEPF-SPVFTDAFLRSVCRKTTRAIKPLLL 164
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
DQ+ + G+GN DE L++A+IHPL A +L+ + + L K I E + +A+ +G S +
Sbjct: 165 DQTAVVGLGNIYVDESLFRARIHPLTPAANLTVKQISALRKAIVETLREAVRMGGSSVRT 224
Query: 236 ----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + RE +P G +I+ GGR T + P+ Q
Sbjct: 225 FVNGQGEMGFFQQKLCVYGREGQP--CVRCGTRIEKTRVGGRGTHFCPKCQ 273
>gi|359783121|ref|ZP_09286338.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas psychrotolerans L19]
gi|359369009|gb|EHK69583.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas psychrotolerans L19]
Length = 270
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 35/291 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I H +G+++ + I+ D + D + + G+ I + R+ K
Sbjct: 1 MPELPEVETTRRGIAPHVVGQRVRRVIVRDGR--LRWPVPEDLDVRLSGQRIEAVERRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R +S GM+G++ + D+ P+K+ +EL+ GL L
Sbjct: 59 YLLIRAESGTLIG-HLGMSGSLRLV-------------PADQPPAKHEHVDIELESGLSL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + DP + +S+LGP+ L E + + + +K ++D +
Sbjct: 105 RYTDPRRFGALLWTQDPHAHVLLSKLGPEPLTEAFDGGRLYELSRGRSMAVKPFIMDNAV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+ G+GN A E L+ A I P + A S+S+ L + IK+V+ +++E G + +
Sbjct: 165 VVGVGNIYAAEALFAAGIDPRRAAGSVSRARYERLAEEIKKVLARSIESGGTTLR----- 219
Query: 241 IFHSREKKPG----KAFVDGKKIDF----------ITAGGRTTAYVPELQK 277
F + PG + FV G+K +F I G R + Y + Q+
Sbjct: 220 DFIGGDGAPGYFKQELFVYGRKGEFCKVCGTGLQEIRLGQRASVYCRKCQR 270
>gi|261207883|ref|ZP_05922568.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6]
gi|289566951|ref|ZP_06447355.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF]
gi|294617838|ref|ZP_06697449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679]
gi|406580957|ref|ZP_11056142.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD4E]
gi|406583128|ref|ZP_11058219.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD3E]
gi|406585544|ref|ZP_11060531.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD2E]
gi|406590633|ref|ZP_11064993.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD1E]
gi|410937196|ref|ZP_11369057.1| DNA-formamidopyrimidine glycosylase [Enterococcus sp. GMD5E]
gi|415897517|ref|ZP_11551092.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4453]
gi|416134168|ref|ZP_11598224.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4452]
gi|427396175|ref|ZP_18888934.1| formamidopyrimidine-DNA glycosylase [Enterococcus durans
FB129-CNAB-4]
gi|430844043|ref|ZP_19461941.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1050]
gi|430851662|ref|ZP_19469397.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1258]
gi|430860199|ref|ZP_19477803.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1573]
gi|430949846|ref|ZP_19486069.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1576]
gi|431006651|ref|ZP_19489116.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1578]
gi|431229778|ref|ZP_19501981.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1622]
gi|431253116|ref|ZP_19504442.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1623]
gi|431294040|ref|ZP_19506914.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1626]
gi|431370131|ref|ZP_19509830.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1627]
gi|431412449|ref|ZP_19511884.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1630]
gi|431661112|ref|ZP_19523924.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1904]
gi|431759337|ref|ZP_19547951.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3346]
gi|447912577|ref|YP_007393989.1| Formamidopyrimidine-DNA glycosylase [Enterococcus faecium NRRL
B-2354]
gi|260078266|gb|EEW65972.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6]
gi|289161250|gb|EFD09146.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF]
gi|291595911|gb|EFF27193.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679]
gi|364090536|gb|EHM33108.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4453]
gi|364092680|gb|EHM35028.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4452]
gi|404453333|gb|EKA00398.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD4E]
gi|404457103|gb|EKA03677.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD3E]
gi|404462559|gb|EKA08291.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD2E]
gi|404469061|gb|EKA13899.1| Formamidopyrimidine-DNA glycosylase [Enterococcus sp. GMD1E]
gi|410734307|gb|EKQ76227.1| DNA-formamidopyrimidine glycosylase [Enterococcus sp. GMD5E]
gi|425722845|gb|EKU85736.1| formamidopyrimidine-DNA glycosylase [Enterococcus durans
FB129-CNAB-4]
gi|430496633|gb|ELA72692.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1050]
gi|430542244|gb|ELA82352.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1258]
gi|430552636|gb|ELA92364.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1573]
gi|430557700|gb|ELA97146.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1576]
gi|430561187|gb|ELB00464.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1578]
gi|430573764|gb|ELB12542.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1622]
gi|430578204|gb|ELB16774.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1623]
gi|430581633|gb|ELB20072.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1626]
gi|430583878|gb|ELB22236.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1627]
gi|430589404|gb|ELB27532.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1630]
gi|430600232|gb|ELB37886.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1904]
gi|430626137|gb|ELB62723.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3346]
gi|445188286|gb|AGE29928.1| Formamidopyrimidine-DNA glycosylase [Enterococcus faecium NRRL
B-2354]
Length = 278
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+++A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSIIDVLDRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|257869279|ref|ZP_05648932.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2]
gi|357050169|ref|ZP_09111377.1| formamidopyrimidine-DNA glycosylase [Enterococcus saccharolyticus
30_1]
gi|257803443|gb|EEV32265.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2]
gi|355381992|gb|EHG29102.1| formamidopyrimidine-DNA glycosylase [Enterococcus saccharolyticus
30_1]
Length = 280
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ I K +K + ++I+ F A + G+ + R+GK
Sbjct: 1 MPELPEVETVRRGLEK-LILNKTIKEMEIRWPRIIESPEVPIFAAMLKGQQFQAFDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G + + + P K++ + DG EL
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG-------KYEFFEKEGVPDKHTHVIFQFTDGSEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + ++ I +LGP+ L E + +FT L K K IK LLLDQ
Sbjct: 106 HYRDVRKFGRMTLVEKDQSSTYKGIMQLGPEPLPELFLLTDFTRDLKKSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q+A +L++ L + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWEAKIHPEQSAATLNEAEINLLHRAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
N + H + G I R T Y P Q+L+
Sbjct: 226 NALGEAGHFQVSLHVYGQTGNPCVRCGTPIVKTKVAQRGTHYCPFCQQLHA 276
>gi|386842772|ref|YP_006247830.1| formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374103073|gb|AEY91957.1| formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451796064|gb|AGF66113.1| formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 286
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 122/240 (50%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + ++ + V V+ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAETEVLHPRAVRRHVAGADDFAHRLKGHHIGTPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL L+ GM+G + ++ + DE K+ + V D
Sbjct: 61 KYLWLPLEETNQSVLAHLGMSGQLLVQ----------PHETADE---KHLRIRVRFADSL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPLFDDEAFHQALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A+IH + + ++ A LL I++V+ AL VG S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARIHYERPTANFTRPVTAELLGHIRDVMNAALAVGGTS 226
>gi|342217507|ref|ZP_08710149.1| DNA-formamidopyrimidine glycosylase [Megasphaera sp. UPII 135-E]
gi|341593854|gb|EGS36672.1| DNA-formamidopyrimidine glycosylase [Megasphaera sp. UPII 135-E]
Length = 277
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 125/295 (42%), Gaps = 34/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R A+E + +GK I + + +++ VS F+ G IL R+GK
Sbjct: 1 MPELPEVETIRTALESYIVGKNI-ERVTVGLPRLVKNVSVLTFQQKTQGCTILGIRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK--YSKFFVELDDGL 118
L L L MTG + D P+ Y + L+ G
Sbjct: 60 YLTLLLSGSVHVVIHLRMTGRLLY---------------MDRLPAMMDYIHIYFRLNKGF 104
Query: 119 ELSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L + D R F L + T + LGPD T + K+K TIKA+LL
Sbjct: 105 -LVYHDVRTFGGFWLVPITGMTGIDGYDSLGPDGNSPKFTATYLYRLVQKRKSTIKAVLL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF 236
DQ ++G+GN DE L+ AKI P + A LS +C L + I +V+ + + G + +
Sbjct: 164 DQKVVAGLGNIYVDEALFLAKIRPDEKANVLSLHACKVLHEAINQVLTQGISHGGTTIRD 223
Query: 237 PSNWI-----------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
N I + +E P G I +I GGR T + P Q+ G
Sbjct: 224 YVNGIGKKGSHQHFLQVYGKEGSPCPR--CGHTIQYIKLGGRGTHFCPLCQRRKG 276
>gi|395236822|ref|ZP_10414972.1| formamidopyrimidine-DNA glycosylase [Turicella otitidis ATCC 51513]
gi|423350252|ref|ZP_17327905.1| formamidopyrimidine-DNA glycosylase [Turicella otitidis ATCC 51513]
gi|394488005|emb|CCI83060.1| formamidopyrimidine-DNA glycosylase [Turicella otitidis ATCC 51513]
gi|404387775|gb|EJZ82877.1| formamidopyrimidine-DNA glycosylase [Turicella otitidis ATCC 51513]
Length = 276
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 115/240 (47%), Gaps = 24/240 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR + H +G + + A N+ DG E + G+++ +A R+
Sbjct: 1 MPELPEVEVVRRGLASHVVGAAFDSAEVLRARSNRGQDG----PLEPLLRGRSVTAARRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
GK LWL L GM+G + V+ D P ++++ + +
Sbjct: 57 GKYLWLELSDGRALFIHLGMSGQLR-------------VQPADTPPGRHTRVRLGMTGAA 103
Query: 118 ---LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
L F D+R F ++ +VP P++ + PD E E ++ +K+ IK
Sbjct: 104 GGRFFLDFVDQRTFGRLLATGMEGAVPAPVAHVAPDPFEESFDPVEVARTIRRKRSEIKR 163
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+LLDQ +SGIGN ADE L+ AKI P + A +L ++ LL + V+ +ALE G S
Sbjct: 164 VLLDQQVVSGIGNIYADEALWAAKIRPTKKATTLRQKDALRLLDEARAVMGRALEAGGTS 223
>gi|57233872|ref|YP_182098.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes
195]
gi|57224320|gb|AAW39377.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes
195]
Length = 270
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 126/238 (52%), Gaps = 19/238 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + I H +GKKI + + ++F V G + R+GK
Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITRMEALWAKTLCP--PETEFNKLVSGLQVTGLSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK-DTDEWPSKYSKFFVELDDGLE 119
+ + L F S M+G + +AVK +T+++P ++++ L++G +
Sbjct: 59 YIIISLSGGLFISVHLKMSGGL------------TAVKAETEQFP-RFTRAVFHLENGEQ 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ FTD R+F ++ LL ++ + +LGP+ L T + LS +K IKA+LLDQ
Sbjct: 106 VYFTDIRKFGRINLLTSLDTI--LEKLGPEPLEGDFTPEVLGKRLSGRKGPIKAVLLDQK 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-GADSSQF 236
++G+GN ADE L++A ++PL+ A SLSK L I+ V+ KA++ GA S +
Sbjct: 164 VLAGVGNMYADEALFKACLNPLRPADSLSKAEVTKLHSAIQSVLHKAIQNKGASVSTY 221
>gi|134102536|ref|YP_001108197.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
NRRL 2338]
gi|291007097|ref|ZP_06565070.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
NRRL 2338]
gi|166198746|sp|A4FMJ7.1|FPG_SACEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|133915159|emb|CAM05272.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
NRRL 2338]
Length = 295
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 118/248 (47%), Gaps = 29/248 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G+ + + + V V D F + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGVAAHVVGRTVSEVEVLHPRSVRRHVPGPDDFATRLAGRCLTAARRRG 60
Query: 60 KNLWLRLDSPP-------FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-YSKFF 111
K +WL L P GM+G + ++ DE P + + +
Sbjct: 61 KYMWLELGGGPEEVDAGEAVLAHLGMSGQLLVQ--------------PDEAPDETHLRVR 106
Query: 112 VELDDG-LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
DDG +L F D+R F + L D +VP P++ + PD L ++ +
Sbjct: 107 FRFDDGGPQLRFVDQRTFGGLSLTELVSVDGVAVPEPVAHIAPDPLEPVFDLEAAVARMR 166
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
K++ +K LLDQ+ +SGIGN ADE L++AK+H + +L++ TLL EV++
Sbjct: 167 KRRTGVKRALLDQTLVSGIGNIYADEALWRAKLHWARPTANLTRPQARTLLVAAVEVMQA 226
Query: 226 ALEVGADS 233
AL G S
Sbjct: 227 ALTAGGTS 234
>gi|241896103|ref|ZP_04783399.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides
ATCC 33313]
gi|241870617|gb|EER74368.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides
ATCC 33313]
Length = 278
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 131/289 (45%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ V+S K + G +A +F+ ++ + IL R+GK
Sbjct: 1 MPELPEVETVRRGLTNLVAGRT-VESTEVRWEKTVGGFTAEEFDQALRNQTILKIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R M G+ Y P K+ LD G++L
Sbjct: 60 YLLFRFTGGITMVSHLRMEGSYYTVPAGTK-------------PGKHDLVTFHLDHGVDL 106
Query: 121 SFTDKRRFAKVRLL-NDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ ND +V ++ +GP+ + +T+D K K+ +K LL+Q
Sbjct: 107 FYRDTRKFGRMNIVPNDQVMTVAGLATIGPEPTEDTLTLDYMISEFGKSKMHVKPFLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
++I+G+GN DE L+Q+KIHPL A L+ + A L K I + +A E
Sbjct: 167 NHIAGLGNIYVDETLWQSKIHPLTAANQLTTDELAILRKNIIAELARATEHHGTTVHSFT 226
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V ++ +F + + R +P G+ + I R T Y P Q
Sbjct: 227 NVFGNAGEFQNELQVYGRVGEP--CLRCGEPLVKIKVAQRGTTYCPVCQ 273
>gi|169831563|ref|YP_001717545.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638407|gb|ACA59913.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis
audaxviator MP104C]
Length = 276
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 131/287 (45%), Gaps = 26/287 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + G + ++ + KV+ + +F + G+ IL R+GK
Sbjct: 1 MPELPEVETIVRDLGARLTGLMVERAEVLLP-KVVAAPAPEEFARLIAGRKILGLSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L MTG + V + +P K++ + LD G+ L
Sbjct: 60 YILIELSRGWVLILHLRMTGQLVYTTV------------LEPFP-KHTHLVLHLDQGV-L 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F + L+ + VP + ELG + L ++F L++ + IK LLLDQ
Sbjct: 106 RFTDLRQFGRASLVPAREVRRVPGLRELGVEPLGAEFVKEDFIRKLARSRRMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++++G+GN DE L++A IHP + A L TL + I+EV+ + + S Q
Sbjct: 166 TFLTGLGNIYTDEALHRAGIHPERRAADLDTREAGTLYRAIREVLAEGVAFRGTSVQHYV 225
Query: 239 NW---------IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ I KK V G I+ I GGR T Y PE Q
Sbjct: 226 DGSGQRGRFQEILRVYGKKGVPCPVCGVPIERIRCGGRGTHYCPECQ 272
>gi|357010981|ref|ZP_09075980.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus elgii B69]
Length = 287
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 29/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR + + I KKI V ++ + D + A F + G++I S R+
Sbjct: 1 MPELPEVETVRRTLNQLVIDKKIERVSVLLPRIIQHPDDIQA--FAVMLEGESIRSVERR 58
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK L LD ++ + + ++G R V +DE K++ DG
Sbjct: 59 GKFLRFMLD-------RYTLVSHLRMEG-------RYGVYRSDEPMEKHTHVVFHFTDGT 104
Query: 119 ELSFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
EL + D R+F + + + P+ +LG + L E T + F + K+K IK LLL
Sbjct: 105 ELRYKDVRQFGTMHVYPKDRDLLEAPLKKLGLEPLDEAFTPEAFRTKIGKRKTKIKPLLL 164
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF 236
+Q YI GIGN DE L+ A IHP + A +LS A L + I E ++ A+ G S +
Sbjct: 165 NQEYIVGIGNIYVDEALFLAGIHPEREAHTLSAAETAKLHEAIVETLKDAVAAGGSSIKS 224
Query: 237 PSN-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKL 278
N +F + K G+ G I GR T + P Q L
Sbjct: 225 YVNGQGEIGMFQHQLKMYGRKDEACLTCGTAIVKTVLAGRGTHFCPVCQPL 275
>gi|431756800|ref|ZP_19545432.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3083]
gi|430620654|gb|ELB57456.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E3083]
Length = 278
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAVGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+ +A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKIKVAQRGTHYCPNCQRL 274
>gi|403736853|ref|ZP_10949814.1| formamidopyrimidine-DNA glycosylase [Austwickia chelonae NBRC
105200]
gi|403192948|dbj|GAB76584.1| formamidopyrimidine-DNA glycosylase [Austwickia chelonae NBRC
105200]
Length = 292
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 122/249 (48%), Gaps = 30/249 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +EEH +G+ I ++ +S ASD A G+ ++ R+G
Sbjct: 1 MPELPEVEVVRRGLEEHVLGRTIGALHLSGSRVARRHLSGASDLSARAAGQRCIAVERRG 60
Query: 60 KNLWLRLDSPPFPSF--QFGMTGAIYIKGVAVTQYK-RSAVKDTDEWPSKYSKFFVELDD 116
K LW+ L +P + + GM+G + + ++K + A D D DD
Sbjct: 61 KYLWMVL-APSYEALIIHLGMSGQMLVSSKECPRHKHQHATFDFD-------------DD 106
Query: 117 GLELSFTDKRRFAKVR---LLND--------PTSVPP-ISELGPDALLEPMTVDEFTDSL 164
G +L F D+R F + L+ D VP I+ + PD L ++ +L
Sbjct: 107 GFQLRFVDQRTFGGLAWSDLIPDSKLTYSELAHGVPASIAHIAPDPLEAGFVPEDLAMAL 166
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
K++ +K LLDQ +SGIGN ADE L++A +H A +LS + L+ +EV+
Sbjct: 167 RKRRTAVKRALLDQRLVSGIGNIYADEALWRAGVHGEHPASALSADRIIGLIGYAREVMT 226
Query: 225 KALEVGADS 233
+AL+ G S
Sbjct: 227 EALDAGGTS 235
>gi|242277525|ref|YP_002989654.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM
2638]
gi|259647331|sp|C6BUX8.1|FPG_DESAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|242120419|gb|ACS78115.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM
2638]
Length = 274
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + E GK I I + + V + F + V G+ I HR+ K
Sbjct: 1 MPELPEVEVISRGLAESLEGKTIESVKILNHSSV--KMPWYLFSSRVAGEKITRIHRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L +F MTG R + P +++ L DG +
Sbjct: 59 LLIMDLGDDLHITFHLKMTG-------------RVLAHEGPTTPEPHTRIVFGLTDGGSI 105
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F +VR LN+ LGP+ L +T +E + ++ +K IK LLL+Q
Sbjct: 106 EFHDTRKFGEVRALNNEELQEWDFYKNLGPEPL--EVTAEELAERITGRKAQIKGLLLNQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
S ++G GN ADE L+++ IHP A LS ES L ++ V+++A++
Sbjct: 164 SVVAGCGNIYADESLFRSGIHPKAKASDLSNESLVKLFTELQAVLKQAIQENGSSIRDYV 223
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
G D+ F +++ + ++ +P GK + T GRT+ + QK+
Sbjct: 224 DAGGDAGGFQNSFKVYGKKGEPCPDC--GKIFEGATVAGRTSTFCSNCQKM 272
>gi|452856557|ref|YP_007498240.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452080817|emb|CCP22582.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 276
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 127/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEELNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP A SLS TL IK+ +++A++ G +
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + QK
Sbjct: 227 NSQGEIGMFQLKHYVYGKKDEPCKTC--GTMISKIVVGGRGTHFCARCQK 274
>gi|374608493|ref|ZP_09681292.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tusciae JS617]
gi|373554025|gb|EHP80612.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tusciae JS617]
Length = 296
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H + K I + V + +D A +L I+ R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVVDKTITAVRVHHLRAVRRHEAGPADLTARLLDSRIVGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL LD GM+G + + A + +R A +D + + LDDG
Sbjct: 61 KYLWLTLDDGSALVVHLGMSGQMLLGAPTSAGARRQRPAPRD------DHLRIAALLDDG 114
Query: 118 LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
LSF D+R F L + D T VP P++ + D L D L +K IK
Sbjct: 115 TTLSFVDQRTFGGWMLADVVTVDGTDVPLPVAHVARDPLDPKFNRDGVVTVLRRKHSEIK 174
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LLDQ+ +SGIGN ADE L++A ++ + A SL++ LL EV+ +AL G
Sbjct: 175 RQLLDQTVVSGIGNIYADEALWRAHVNGARLASSLTRAKLGELLDAATEVMTEAL--GQG 232
Query: 233 SSQFPSNWI 241
+ F S ++
Sbjct: 233 GTSFDSLYV 241
>gi|389866044|ref|YP_006368285.1| formamidopyrimidine-DNA glycosylase [Modestobacter marinus]
gi|388488248|emb|CCH89821.1| Formamidopyrimidine-DNA glycosylase [Modestobacter marinus]
Length = 294
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 24/245 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ G+ I + + V + A F A++ G+ + +AHR+G
Sbjct: 1 MPELPEVEVVRRGLDRWVTGRTIAEVEVHHPRAVRRHLEGAEHFVAALTGRTLTAAHRRG 60
Query: 60 KNLWLRL-DSPPFPSFQ-----FGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL + +S P+ Q GM+G + ++ ++ DE + F
Sbjct: 61 KYLWLPVAESDGTPTGQALVAHLGMSGQLLVE----------KPEEADEVHLRARFRFT- 109
Query: 114 LDDGLELSFTDKRRFAKVRLLND----PTSVPP-ISELGPDALLEPMTVDEFTDSLSKKK 168
D G EL F D+R F + + + P VPP ++ + D L + VD F+ +L ++
Sbjct: 110 -DGGRELRFVDQRTFGGLAVEDGAGTGPADVPPRLAHIAIDPLDDAFDVDAFSAALRRRH 168
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+K LLDQ+ I G+GN ADE L++A++H + L++ A LL+ +++V+ ++LE
Sbjct: 169 TEVKRALLDQTLIGGVGNIYADESLWRARLHGARPTDKLTRAQVADLLEGVRDVLGESLE 228
Query: 229 VGADS 233
G S
Sbjct: 229 QGGTS 233
>gi|271969196|ref|YP_003343392.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM
43021]
gi|270512371|gb|ACZ90649.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM
43021]
Length = 288
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 115/241 (47%), Gaps = 22/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ I + + + V A +F + + G+ I SA R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRVIAHAEVLHPRAIRRHVPGAEEFSSRLKGRTIGSAERRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL LD GM+G + + G A ++ R + TD P
Sbjct: 61 KYLWLPLDGSDAILAHLGMSGQLLVVEPGSAPERHLRVRIGFTDGGP------------- 107
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
+L F D+R F V + S VP PI+ + D E D F L ++ +K
Sbjct: 108 -DLRFVDQRTFGHVLVTAMAHSGGRPVPEPITHIAADPFEEHFDEDLFGRRLRARQTEVK 166
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LLDQS ISG+GN ADE L++A++H + +L++ A LL +EV+ AL G
Sbjct: 167 RALLDQSLISGVGNIYADEALWRARLHGARPTGALTRPKIAELLGAAREVMAAALSEGGT 226
Query: 233 S 233
S
Sbjct: 227 S 227
>gi|407983093|ref|ZP_11163754.1| formamidopyrimidine-DNA glycosylase [Mycobacterium hassiacum DSM
44199]
gi|407375376|gb|EKF24331.1| formamidopyrimidine-DNA glycosylase [Mycobacterium hassiacum DSM
44199]
Length = 291
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H + + I + V + +D A +LG I+ R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVVDRTITAVRVHHPRAVRRHEAGPADLTARLLGARIIGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + G + R A LDDG
Sbjct: 61 KYLWLSLDDGAALVVHLGMSGQMLLGGTPNENHLRIAAL---------------LDDGTT 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F + + D VP P++ L D L D L +K IK
Sbjct: 106 LSFVDQRTFGGWLIADMVTVDGADVPAPVAHLARDPLDPWFDRDAVVTVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L++A+I+ + A SLS+ A LL +V+ AL G S
Sbjct: 166 LLDQTVVSGIGNIYADEALWRARINGARPASSLSRPRLAELLDHAADVMRDALAQGGTS 224
>gi|296171391|ref|ZP_06852724.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894166|gb|EFG73925.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 286
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 112/243 (46%), Gaps = 25/243 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ +GK I + V + +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLQAGVVGKTITAVRVHHPRAVRRHEAGPADLTARLLDARITGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
K LWL LD P P GM+G + + V + R + LD
Sbjct: 61 KYLWLVLDGPGQPDTALVVHLGMSGQMLLGEVPRADHVRISAL---------------LD 105
Query: 116 DGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKIT 170
DG LSF D+R F L + D + VP P++ L D L D D L +K
Sbjct: 106 DGTVLSFADQRTFGGWMLADLVEVDGSVVPAPVAHLARDPLDPRFDRDAVVDVLRRKHSE 165
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IK LLDQ+ +SGIGN ADE L++AK++ + A +LS+ +L EV+ AL G
Sbjct: 166 IKRQLLDQTVVSGIGNIYADEALWRAKVNGARIAATLSRRRLGAVLDAAAEVMRDALSQG 225
Query: 231 ADS 233
S
Sbjct: 226 GTS 228
>gi|16803604|ref|NP_465089.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes EGD-e]
gi|284801955|ref|YP_003413820.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578]
gi|284995097|ref|YP_003416865.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923]
gi|386050540|ref|YP_005968531.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
R2-561]
gi|404284057|ref|YP_006684954.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2372]
gi|405758613|ref|YP_006687889.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2479]
gi|21362541|sp|Q8Y6W7.3|FPG_LISMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|16410993|emb|CAC99642.1| mutM [Listeria monocytogenes EGD-e]
gi|284057517|gb|ADB68458.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578]
gi|284060564|gb|ADB71503.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923]
gi|346424386|gb|AEO25911.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
R2-561]
gi|404233559|emb|CBY54962.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2372]
gi|404236495|emb|CBY57897.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2479]
Length = 273
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + K K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + ++ K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|430822523|ref|ZP_19441101.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0120]
gi|430865083|ref|ZP_19480841.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1574]
gi|431743134|ref|ZP_19532015.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2071]
gi|430443100|gb|ELA53097.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0120]
gi|430553161|gb|ELA92862.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1574]
gi|430607498|gb|ELB44818.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2071]
Length = 278
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ + S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETVQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+++A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSIIDVLDRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|294615647|ref|ZP_06695502.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636]
gi|425057931|ref|ZP_18461328.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 504]
gi|430825488|ref|ZP_19443692.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0164]
gi|430827617|ref|ZP_19445750.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0269]
gi|430833100|ref|ZP_19451113.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0679]
gi|430838094|ref|ZP_19456044.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0688]
gi|430849691|ref|ZP_19467464.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1185]
gi|430858147|ref|ZP_19475776.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1552]
gi|431146140|ref|ZP_19499037.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1620]
gi|431497706|ref|ZP_19514860.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1634]
gi|431746176|ref|ZP_19535010.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2134]
gi|431764106|ref|ZP_19552649.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4215]
gi|291591476|gb|EFF23130.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636]
gi|403039506|gb|EJY50650.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 504]
gi|430445953|gb|ELA55652.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0164]
gi|430484477|gb|ELA61492.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0269]
gi|430486555|gb|ELA63391.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0679]
gi|430492374|gb|ELA68788.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0688]
gi|430537442|gb|ELA77785.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1185]
gi|430546099|gb|ELA86065.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1552]
gi|430575680|gb|ELB14377.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1620]
gi|430588641|gb|ELB26833.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1634]
gi|430608945|gb|ELB46151.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2134]
gi|430631291|gb|ELB67613.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4215]
Length = 278
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L + +V+++A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSVIDVLDRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|451345942|ref|YP_007444573.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens IT-45]
gi|449849700|gb|AGF26692.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens IT-45]
Length = 276
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 127/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEERNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP A SLS TL IK+ +++A++ G +
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + QK
Sbjct: 227 NSQGEIGMFQLKHYVYGKKDEPCKTC--GTMISKIVVGGRGTHFCARCQK 274
>gi|429506197|ref|YP_007187381.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429487787|gb|AFZ91711.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 278
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 127/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP A SLS TL IK+ +++A++ G +
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + QK
Sbjct: 227 NSQGEIGMFQLKHYVYGKKDEPCKTC--GTMISKIVVGGRGTHFCARCQK 274
>gi|341820027|emb|CCC56252.1| formamidopyrimidine-DNA glycosylase [Weissella thailandensis
fsh4-2]
Length = 278
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 16/230 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ V+S K++ G++A +F+ ++ + IL R+GK
Sbjct: 1 MPELPEVETVRRGLTNLVAGRT-VESTEVRWEKIVGGLTAEEFDQALRNQTILKIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R M G+ Y V E P K+ LD G++L
Sbjct: 60 YLLFRFTGDITMVSHLRMEGSYY------------TVPAGTE-PGKHDLVTFHLDHGVDL 106
Query: 121 SFTDKRRFAKVRLL-NDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ ND +V ++ +GP+ +T+D K K+ +K LL+Q
Sbjct: 107 FYRDTRKFGRMNIVPNDQVMTVAGLATIGPEPTESDLTIDYMISEFGKSKMHVKPFLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
++I+G+GN DE L+Q+KIHPL +A L+ E L K I + +A E
Sbjct: 167 NHIAGLGNIYVDETLWQSKIHPLTSANQLTVEELTILRKNIIAELARATE 216
>gi|307286687|ref|ZP_07566773.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109]
gi|422703428|ref|ZP_16761250.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1302]
gi|306502165|gb|EFM71449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109]
gi|315165260|gb|EFU09277.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1302]
Length = 280
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQVDDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|16800667|ref|NP_470935.1| formamidopyrimidine-DNA glycosylase [Listeria innocua Clip11262]
gi|21362544|sp|Q92BF1.3|FPG_LISIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|16414086|emb|CAC96830.1| mutM [Listeria innocua Clip11262]
Length = 273
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+HP + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVHPERAANSLSDKEINRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK + G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTGEPCVICGTPIEKIKLNGRGTHFCPHCQK 273
>gi|302391164|ref|YP_003826984.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM
5501]
gi|302203241|gb|ADL11919.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM
5501]
Length = 275
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 23/286 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ + E + K+I + + K+I + +F ++ G I R+GK
Sbjct: 1 MPELPEVQTVVDTLTESVLKKEIT-DVEVKNEKLIANLEVEEFIDTLTGSRIEDIRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + LD+ + MTG R E KY F + EL
Sbjct: 60 YIIMELDTDYYLVTHLRMTG-------------RFVYCQKKEEVDKYDYIFFKFKGNDEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
KR+F + L+ D +++LGP+ L + T+D+F + LS ++ IK LLL+Q +
Sbjct: 107 RLGSKRKFTRTYLVADLKEAGSLTKLGPEPLSDEFTLDKFKEILSTRRGRIKPLLLNQKF 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------VGA 231
++G+GN DE L+ ++IHPL+TA +L+ + L + I++V+ + +E V A
Sbjct: 167 LAGLGNIYVDEALFISQIHPLRTADTLTDQEIKKLYQAIQQVLAEGIEHRGTTKWDYVDA 226
Query: 232 DSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
++K + + I GGR T + P+ Q+
Sbjct: 227 SGEAGSYQNYLRVYDRKGEECNRCAAILKKIKVGGRGTYFCPQCQE 272
>gi|306836416|ref|ZP_07469393.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC
49726]
gi|304567697|gb|EFM43285.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC
49726]
Length = 271
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 132/297 (44%), Gaps = 47/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD--DNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE+ RR +E + +GK+I IA N+ D V+GK I + R+
Sbjct: 1 MPELPEVESVRRGVESYVVGKEITSVDIAHPRANRGQD----EPLAGLVVGKEIAAVARR 56
Query: 59 GKNLWLR------LDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
GK +WL +DS F GM+G + I TD S + +
Sbjct: 57 GKFMWLEFVGEDPMDSHRDVLFIHLGMSGQLRIG-------------HTD---SPHRRIT 100
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
V L D EL F D+R F L P S IS +G D L + L KKK +
Sbjct: 101 VVLSDATELHFVDQRTFGY--WLYAPWST--ISHIGLDPLEPDFDIASAARRLRKKKTAV 156
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG- 230
K LLDQ+ +SGIGN ADE L+ A+I P + A +L ++ LL + V+ AL+ G
Sbjct: 157 KTALLDQTLVSGIGNIYADEALWTARISPRKKASALRQKDAVALLSAAQTVMSAALKAGG 216
Query: 231 -----------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+S F + + R +P G I+ GGR++ Y P Q
Sbjct: 217 TSFDSLYVNVNGESGYFARSLAAYGRAGQPCSRC--GTLIERSVIGGRSSHYCPHCQ 271
>gi|357401982|ref|YP_004913907.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|386358045|ref|YP_006056291.1| formamidopyrimidine-DNA glycosylase [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|337768391|emb|CCB77104.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365808553|gb|AEW96769.1| formamidopyrimidine-DNA glycosylase [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 292
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 44/303 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V A DF + + G + A R+G
Sbjct: 1 MPELPEVEVVRRGLERWISGRTVAEVTVLHPRAVRRHPAGAEDFASRLRGTVLGPARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGV--AVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL LD GM+G + ++ + + R ++ D D G
Sbjct: 61 KYLWLLLDDGGSLLGHLGMSGQLLVQPLDAPAETHLRVRIRLAD-------------DLG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-----------PISELGPDALLEPMTVDEFTDSLSK 166
EL F D+R F L+ VP P++ + PD L D F +L +
Sbjct: 108 TELRFVDQRTFGG---LSVHPCVPDGPDAAVGLPLPLAHIAPDPLEAAFDEDAFHAALRR 164
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
++ TIK LLDQS ISG+GN ADE L+++++H + +L++ A L+ I+EV+ +A
Sbjct: 165 RRTTIKRALLDQSLISGVGNIYADEALWRSRLHYDRPTATLTRPRTAELVGHIREVMNEA 224
Query: 227 LEVG------------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPE 274
L VG +S F + + RE +P + G I R++ Y P
Sbjct: 225 LAVGGTSFDSLYVNVNGESGYFDRSLDAYGREDEPCRRC--GTAIRRRPWMNRSSYYCPR 282
Query: 275 LQK 277
Q+
Sbjct: 283 CQR 285
>gi|419782746|ref|ZP_14308544.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK610]
gi|383182959|gb|EIC75507.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK610]
Length = 274
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IGKKI SI K+I +F V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGKKI-SSIEIRYPKMIK-TDVDEFRKEVPGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+E +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFIEFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 272
>gi|374621064|ref|ZP_09693598.1| formamidopyrimidine-DNA glycosylase Fpg [gamma proteobacterium
HIMB55]
gi|374304291|gb|EHQ58475.1| formamidopyrimidine-DNA glycosylase Fpg [gamma proteobacterium
HIMB55]
Length = 270
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR IE H +G+K V S++ D ++ +S SD E + G +L+ R+ K
Sbjct: 1 MPELPEVETTRRGIEPHVVGRK-VTSVMVRDRRLRWPIS-SDLEQRLQGARVLATRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + GM+G++ + VT+ E P K+ + LD G L
Sbjct: 59 YLLIDFQDGSL-LVHLGMSGSLRL----VTE---------KEEPRKHDHVDIGLDSGFLL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D RRF + L+D + + + LGP+ L + D + K+ IK ++D
Sbjct: 105 RYHDPRRFGSMHWLDDASHML-LDHLGPEPLSTDFSADYLYGTSRKRSAPIKHFIMDAKV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A+E L+ A I P + A +SK L+ IK+V+ A+EVG +
Sbjct: 164 VVGVGNIYANEALFMAGIRPDRAANKISKARYELLVDAIKQVLATAIEVGGTT 216
>gi|354580240|ref|ZP_08999145.1| formamidopyrimidine-DNA glycosylase [Paenibacillus lactis 154]
gi|353202671|gb|EHB68120.1| formamidopyrimidine-DNA glycosylase [Paenibacillus lactis 154]
Length = 277
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE +R + + I K + + + ++I D A +L G I R+G
Sbjct: 1 MPELPEVETVKRTLNQ-LIKGKYIDHVTVNLPRIIQRPDDVDAFAFMLKGHTIEGVERRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L + LD S M G R + DE K++ DG E
Sbjct: 60 KFLRILLDGLVLVS-HLRMEG-------------RYGLYRKDEPVEKHTHVIFHFSDGTE 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + L + + PP+S+LG + L + +T D F + + KK IKA+LL+
Sbjct: 106 LRYKDVRQFGTMHLFAPGEEFNHPPLSKLGYEPLDDTLTPDTFKEVIGSKKTKIKAVLLN 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
Q+Y+ GIGN DE L++A IHP A L + + L I + +A+E G S
Sbjct: 166 QAYVVGIGNIYVDESLFRAGIHPEIPANKLGDDELSRLYHSIVATLSEAVEAGGSSIKSY 225
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + R+ +P + G + GGR T Y P Q
Sbjct: 226 VNGQGEMGMFQHSLKIYGRKDEP--CYGCGGPVFKTVVGGRGTHYCPSCQ 273
>gi|384512571|ref|YP_005707664.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis OG1RF]
gi|430358758|ref|ZP_19425518.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis OG1X]
gi|430366998|ref|ZP_19427711.1| formamidopyrimidine-DNA glycosyllase [Enterococcus faecalis M7]
gi|327534460|gb|AEA93294.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis OG1RF]
gi|429513583|gb|ELA03162.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis OG1X]
gi|429516812|gb|ELA06288.1| formamidopyrimidine-DNA glycosyllase [Enterococcus faecalis M7]
Length = 280
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQCHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|261346782|ref|ZP_05974426.1| DNA-formamidopyrimidine glycosylase [Providencia rustigianii DSM
4541]
gi|282565180|gb|EFB70715.1| DNA-formamidopyrimidine glycosylase [Providencia rustigianii DSM
4541]
Length = 269
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 137/292 (46%), Gaps = 38/292 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +I+ + S+ S+ + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTIAYTIVRNSRL---RWPVSEQIKSLADEKVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L+ + GM+G++ I T+E P K+ + L DG
Sbjct: 58 YLLIELNKG-WIIVHLGMSGSVRIL--------------TEELPEEKHDHVDLILGDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF D + ++ LGP+ L + D K+K+ +K L+D
Sbjct: 103 LRYTDPRRFGAWLWCEDLDTSSVLAHLGPEPLSDEFNPQYLFDLAKKRKVAVKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ G+GN A+E L+ +KI P + L+ L+K IK+V+++++E G + +
Sbjct: 163 VVVGVGNIYANEALFASKISPEKMVNQLTLADITELVKQIKKVLQRSIEQGGTTLK---- 218
Query: 240 WIFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F + KPG + FV GKK I+ I G RTT Y P+ QK
Sbjct: 219 -DFLQSDGKPGYFAQELFVYGKKGEPCSMCGTHIESIKQGQRTTFYCPQCQK 269
>gi|69246665|ref|ZP_00604055.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO]
gi|257878418|ref|ZP_05658071.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933]
gi|257882836|ref|ZP_05662489.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502]
gi|257889383|ref|ZP_05669036.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410]
gi|257894396|ref|ZP_05674049.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408]
gi|260560007|ref|ZP_05832185.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68]
gi|293559953|ref|ZP_06676461.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162]
gi|294623285|ref|ZP_06702150.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317]
gi|314937781|ref|ZP_07845098.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium
TX0133a04]
gi|314941673|ref|ZP_07848553.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C]
gi|314948921|ref|ZP_07852290.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082]
gi|314950961|ref|ZP_07854028.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A]
gi|314992963|ref|ZP_07858359.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B]
gi|314996410|ref|ZP_07861453.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium
TX0133a01]
gi|383328867|ref|YP_005354751.1| Formamidopyrimidine-DNA glycosylase [Enterococcus faecium Aus0004]
gi|389868744|ref|YP_006376167.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium DO]
gi|424792400|ref|ZP_18218637.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium V689]
gi|424802661|ref|ZP_18228138.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium S447]
gi|424834915|ref|ZP_18259600.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R501]
gi|424859603|ref|ZP_18283594.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R499]
gi|424869097|ref|ZP_18292820.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R497]
gi|424950747|ref|ZP_18365896.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R496]
gi|424953548|ref|ZP_18368500.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R494]
gi|424955613|ref|ZP_18370439.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R446]
gi|424960443|ref|ZP_18374958.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1986]
gi|424963162|ref|ZP_18377426.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1190]
gi|424967007|ref|ZP_18380748.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1140]
gi|424970234|ref|ZP_18383761.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1139]
gi|424973187|ref|ZP_18386476.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1137]
gi|424977743|ref|ZP_18390729.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1123]
gi|424980148|ref|ZP_18392962.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV99]
gi|424985183|ref|ZP_18397675.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV69]
gi|424987168|ref|ZP_18399557.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV38]
gi|424990263|ref|ZP_18402480.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV26]
gi|424995067|ref|ZP_18406965.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV168]
gi|424996915|ref|ZP_18408699.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV165]
gi|425000769|ref|ZP_18412317.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV161]
gi|425005271|ref|ZP_18416529.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV102]
gi|425006564|ref|ZP_18417736.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV1]
gi|425012304|ref|ZP_18423128.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium E422]
gi|425015069|ref|ZP_18425710.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium E417]
gi|425016753|ref|ZP_18427298.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C621]
gi|425019801|ref|ZP_18430141.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C497]
gi|425027913|ref|ZP_18435165.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C1904]
gi|425032067|ref|ZP_18437155.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 515]
gi|425034753|ref|ZP_18439620.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 514]
gi|425038456|ref|ZP_18443072.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 513]
gi|425041836|ref|ZP_18446216.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 511]
gi|425045984|ref|ZP_18450040.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 510]
gi|425050291|ref|ZP_18454053.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 509]
gi|425051334|ref|ZP_18455003.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 506]
gi|425060975|ref|ZP_18464241.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 503]
gi|430830709|ref|ZP_19448765.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0333]
gi|430846044|ref|ZP_19463909.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1133]
gi|430854809|ref|ZP_19472521.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1392]
gi|431541896|ref|ZP_19518125.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1731]
gi|431750123|ref|ZP_19538850.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2297]
gi|431754812|ref|ZP_19543472.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2883]
gi|431767187|ref|ZP_19555642.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1321]
gi|431770809|ref|ZP_19559206.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1644]
gi|431772267|ref|ZP_19560609.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2369]
gi|431775793|ref|ZP_19564063.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2560]
gi|431778778|ref|ZP_19566984.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4389]
gi|431781906|ref|ZP_19570046.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E6012]
gi|431785717|ref|ZP_19573740.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E6045]
gi|68195139|gb|EAN09597.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO]
gi|257812646|gb|EEV41404.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933]
gi|257818494|gb|EEV45822.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502]
gi|257825743|gb|EEV52369.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410]
gi|257830775|gb|EEV57382.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408]
gi|260073842|gb|EEW62166.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68]
gi|291597313|gb|EFF28499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317]
gi|291606041|gb|EFF35467.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162]
gi|313589392|gb|EFR68237.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium
TX0133a01]
gi|313592486|gb|EFR71331.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B]
gi|313596816|gb|EFR75661.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A]
gi|313599564|gb|EFR78407.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C]
gi|313642812|gb|EFS07392.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium
TX0133a04]
gi|313644711|gb|EFS09291.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082]
gi|378938561|gb|AFC63633.1| Formamidopyrimidine-DNA glycosylase [Enterococcus faecium Aus0004]
gi|388533993|gb|AFK59185.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium DO]
gi|402917679|gb|EJX38433.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium V689]
gi|402919380|gb|EJX39986.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium S447]
gi|402921850|gb|EJX42269.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R501]
gi|402926266|gb|EJX46317.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R499]
gi|402932545|gb|EJX52044.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R496]
gi|402936152|gb|EJX55350.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R497]
gi|402938753|gb|EJX57734.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R494]
gi|402947721|gb|EJX65913.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1986]
gi|402948262|gb|EJX66415.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium R446]
gi|402950164|gb|EJX68176.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1190]
gi|402955274|gb|EJX72816.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1140]
gi|402959226|gb|EJX76500.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1137]
gi|402962325|gb|EJX79278.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1139]
gi|402964612|gb|EJX81382.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium P1123]
gi|402966601|gb|EJX83221.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV69]
gi|402967249|gb|EJX83821.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV99]
gi|402974988|gb|EJX90980.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV38]
gi|402978280|gb|EJX94035.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV168]
gi|402979839|gb|EJX95486.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV26]
gi|402986674|gb|EJY01786.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV102]
gi|402987449|gb|EJY02511.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV165]
gi|402988507|gb|EJY03510.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV161]
gi|402993761|gb|EJY08349.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium E422]
gi|402996846|gb|EJY11207.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium E417]
gi|402997096|gb|EJY11446.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium ERV1]
gi|403004985|gb|EJY18736.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C1904]
gi|403006193|gb|EJY19857.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C621]
gi|403010746|gb|EJY24097.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium C497]
gi|403014047|gb|EJY27067.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 515]
gi|403019436|gb|EJY32039.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 514]
gi|403019561|gb|EJY32157.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 513]
gi|403024237|gb|EJY36411.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 509]
gi|403025335|gb|EJY37421.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 511]
gi|403025869|gb|EJY37913.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 510]
gi|403037856|gb|EJY49107.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 506]
gi|403042083|gb|EJY53058.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 503]
gi|430482298|gb|ELA59416.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0333]
gi|430539864|gb|ELA80103.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1133]
gi|430547688|gb|ELA87604.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1392]
gi|430592943|gb|ELB30930.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1731]
gi|430610596|gb|ELB47740.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2297]
gi|430618640|gb|ELB55481.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2883]
gi|430631195|gb|ELB67518.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1321]
gi|430634700|gb|ELB70814.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1644]
gi|430638131|gb|ELB74108.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2369]
gi|430642441|gb|ELB78219.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E2560]
gi|430643439|gb|ELB79178.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E4389]
gi|430646876|gb|ELB82337.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E6045]
gi|430648307|gb|ELB83714.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E6012]
Length = 278
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD S M G K K+ K++ +DG +L
Sbjct: 60 FLIFHLDHCELIS-HLRMEG------------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+++A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSIIDVLDRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|68536282|ref|YP_250987.1| formamidopyrimidine-DNA glycosylase [Corynebacterium jeikeium K411]
gi|90101301|sp|Q4JUY8.3|FPG_CORJK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|68263881|emb|CAI37369.1| mutM [Corynebacterium jeikeium K411]
Length = 288
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 127/304 (41%), Gaps = 43/304 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +EEH +G++ + V G +S+ + + R+GK
Sbjct: 1 MPELPEVEVVRRGLEEHLVGRRFTDVQVCHPRAVRSG-EPEVLVSSLRDATVTAVKRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL GM+G + V + + S + + L DG EL
Sbjct: 60 FLWLDFGEDFLLQVHLGMSGQML-------------VAEPGQVQSPHVRIRAGLSDGREL 106
Query: 121 SFTDKRRFAKVRL-------------LNDPTSVPP--ISELGPDALLEPMTVDEFTDSLS 165
F D+R F + RL + P + P +S + D L +
Sbjct: 107 CFVDQRTFGEWRLEKAVPDPWAAGAGVASPKNFLPQNVSHIAADPLEAVFDAQAAVARMK 166
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
K+ +K +LL+Q +SGIGN ADE L+ A + P ++A LS+ + +L+ EV+E
Sbjct: 167 SKRAAVKTVLLNQEVVSGIGNIYADEALFLAGVRPRRSAALLSRPTLHRVLQSAAEVMEC 226
Query: 226 ALEVGAD------------SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVP 273
ALE G S F + + R +P K G I + GGR+T Y
Sbjct: 227 ALEQGGTSFDSLYVNVNGASGYFSRSLNVYGRGGEPCKRC--GAPIKRVVVGGRSTHYCA 284
Query: 274 ELQK 277
Q+
Sbjct: 285 TCQR 288
>gi|29375464|ref|NP_814618.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583]
gi|227554990|ref|ZP_03985037.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22]
gi|229548815|ref|ZP_04437540.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC
29200]
gi|255971331|ref|ZP_05421917.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1]
gi|255973950|ref|ZP_05424536.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2]
gi|256761635|ref|ZP_05502215.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3]
gi|256960004|ref|ZP_05564175.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96]
gi|256964300|ref|ZP_05568471.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704]
gi|257083793|ref|ZP_05578154.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1]
gi|257089290|ref|ZP_05583651.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188]
gi|257415443|ref|ZP_05592437.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ARO1/DG]
gi|257418474|ref|ZP_05595468.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11]
gi|257421125|ref|ZP_05598115.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus
faecalis X98]
gi|293383757|ref|ZP_06629664.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712]
gi|293388767|ref|ZP_06633260.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613]
gi|307271879|ref|ZP_07553147.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855]
gi|307278425|ref|ZP_07559500.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860]
gi|312904439|ref|ZP_07763598.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635]
gi|312907027|ref|ZP_07766023.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO
512]
gi|312952853|ref|ZP_07771715.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102]
gi|312978715|ref|ZP_07790442.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO
516]
gi|384517927|ref|YP_005705232.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis 62]
gi|422689764|ref|ZP_16747868.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0630]
gi|422692166|ref|ZP_16750188.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0031]
gi|422694480|ref|ZP_16752471.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4244]
gi|422699768|ref|ZP_16757629.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1342]
gi|422707337|ref|ZP_16765032.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0043]
gi|422713361|ref|ZP_16770111.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309A]
gi|422717613|ref|ZP_16774297.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309B]
gi|422727399|ref|ZP_16783840.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0312]
gi|422731006|ref|ZP_16787387.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0645]
gi|422735315|ref|ZP_16791589.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1341]
gi|422738964|ref|ZP_16794149.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2141]
gi|428766385|ref|YP_007152496.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis str.
Symbioflor 1]
gi|39931263|sp|Q837G3.3|FPG_ENTFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|29342924|gb|AAO80688.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583]
gi|227175872|gb|EEI56844.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22]
gi|229306044|gb|EEN72040.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC
29200]
gi|255962349|gb|EET94825.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1]
gi|255966822|gb|EET97444.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2]
gi|256682886|gb|EEU22581.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3]
gi|256950500|gb|EEU67132.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96]
gi|256954796|gb|EEU71428.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704]
gi|256991823|gb|EEU79125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1]
gi|256998102|gb|EEU84622.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188]
gi|257157271|gb|EEU87231.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ARO1/DG]
gi|257160302|gb|EEU90262.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11]
gi|257162949|gb|EEU92909.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus
faecalis X98]
gi|291078833|gb|EFE16197.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712]
gi|291081924|gb|EFE18887.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613]
gi|295113920|emb|CBL32557.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA
glycosylase [Enterococcus sp. 7L76]
gi|306504931|gb|EFM74126.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860]
gi|306511385|gb|EFM80387.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855]
gi|310627012|gb|EFQ10295.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO
512]
gi|310629369|gb|EFQ12652.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102]
gi|310632137|gb|EFQ15420.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635]
gi|311288422|gb|EFQ66978.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO
516]
gi|315145153|gb|EFT89169.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2141]
gi|315148037|gb|EFT92053.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4244]
gi|315152952|gb|EFT96968.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0031]
gi|315155182|gb|EFT99198.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0043]
gi|315157510|gb|EFU01527.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0312]
gi|315163061|gb|EFU07078.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0645]
gi|315167986|gb|EFU12003.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1341]
gi|315171782|gb|EFU15799.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1342]
gi|315574208|gb|EFU86399.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309B]
gi|315577338|gb|EFU89529.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0630]
gi|315581649|gb|EFU93840.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309A]
gi|323480060|gb|ADX79499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis 62]
gi|427184558|emb|CCO71782.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis str.
Symbioflor 1]
Length = 280
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|378981297|ref|YP_005229438.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|419976061|ref|ZP_14491464.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981837|ref|ZP_14497108.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419987368|ref|ZP_14502489.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992938|ref|ZP_14507888.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419999163|ref|ZP_14513942.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004934|ref|ZP_14519565.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010527|ref|ZP_14524999.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016685|ref|ZP_14530974.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420022169|ref|ZP_14536341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027830|ref|ZP_14541818.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033468|ref|ZP_14547272.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039270|ref|ZP_14552907.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420045100|ref|ZP_14558572.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420051030|ref|ZP_14564322.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056662|ref|ZP_14569815.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420062576|ref|ZP_14575544.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067993|ref|ZP_14580779.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420073462|ref|ZP_14586088.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420079208|ref|ZP_14591657.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420082641|ref|ZP_14594935.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421910260|ref|ZP_16340049.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421916184|ref|ZP_16345769.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|428147721|ref|ZP_18995633.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428938093|ref|ZP_19011225.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae VA360]
gi|364520708|gb|AEW63836.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397341556|gb|EJJ34733.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397342157|gb|EJJ35323.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397344908|gb|EJJ38037.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397358754|gb|EJJ51467.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397359810|gb|EJJ52499.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397364008|gb|EJJ56643.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374654|gb|EJJ66979.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397378579|gb|EJJ70789.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385422|gb|EJJ77523.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397392743|gb|EJJ84525.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397394836|gb|EJJ86555.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403389|gb|EJJ94961.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397409962|gb|EJK01258.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397410333|gb|EJK01616.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420310|gb|EJK11391.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427081|gb|EJK17867.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397427664|gb|EJK18428.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397437943|gb|EJK28479.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444009|gb|EJK34303.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451958|gb|EJK42034.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|410115858|emb|CCM82674.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410121548|emb|CCM88394.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|426306283|gb|EKV68388.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae VA360]
gi|427542362|emb|CCM91771.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 269
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 118/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L S + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLEL-SDGWIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|408411094|ref|ZP_11182277.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sp. 66c]
gi|407874757|emb|CCK84083.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sp. 66c]
Length = 275
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 132/289 (45%), Gaps = 27/289 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I + + D ++ V + F+ + GK I R GK
Sbjct: 1 MPEMPEVETVRRTLTPLAAGKTIKRVDVWYDKVIVGDVKS--FQQQLKGKTIEKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL S M G +Y+ + D K+ DG L
Sbjct: 59 YLLFRLGDLTIVS-HLRMEG----------KYRLTT---ADAPREKHEHLQFVFTDGSAL 104
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T V I LGP+AL T D F +L K IK LLLDQ
Sbjct: 105 RYDDVRKFGRLQLVETGTERIVTGIKHLGPEALSPEFTEDYFAKALKNKTKKIKNLLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN DEVL+QAKI+P+ L+K+ L + I I++A ++G +
Sbjct: 165 TVVAGLGNIYVDEVLWQAKINPVAEPKDLTKQQVQDLYEAINSTIKEATKLGGTTVHSFL 224
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKL 278
N + R + G+ D G+K+ I GR T Y P Q+L
Sbjct: 225 NAEGQAGGYQDRLEVYGRVGEDCLRCGEKLVKIKVNGRGTTYCPNCQRL 273
>gi|335049527|ref|ZP_08542517.1| DNA-formamidopyrimidine glycosylase [Megasphaera sp. UPII 199-6]
gi|333762787|gb|EGL40272.1| DNA-formamidopyrimidine glycosylase [Megasphaera sp. UPII 199-6]
Length = 280
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 126/290 (43%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + +GK+IV+ + N V+ + F V+GK I R+GK
Sbjct: 1 MPELPEVETVRTHLAPYVVGKRIVQVEVNAPN-VLKNTTVPGFRNRVVGKRIEGLVRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L MTG + R A+++ ++ + L GL L
Sbjct: 60 YLQFLLSGEQAVLVHLRMTGKLLY---------RPALQEEPR-----ARLRLHLQKGL-L 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R F L+ PT VP LGPDA E T L+ KK IKALLLDQ
Sbjct: 105 VYEDVRTFGGFWLVPKTGPTGVPGYDTLGPDAAGEAFTAAYLRQCLAGKKRMIKALLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++G+GN DE L+ A I P + A ++S+ L I V+ + L G +
Sbjct: 165 HVVAGLGNIYVDEALFAAHIRPDRQAATISRTEVGKLHAAIGRVLAQGLAHGGTTIRDFV 224
Query: 234 ---SQFPSNWIF---HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ +N F + RE P G ++ + GR T Y P Q+
Sbjct: 225 DSNGREGTNQSFLQVYGREGMPCPHC--GTRLVYTKVSGRGTRYCPHCQR 272
>gi|325290276|ref|YP_004266457.1| DNA-(apurinic or apyrimidinic site) lyase; formamidopyrimidine-DNA
glycosylase [Syntrophobotulus glycolicus DSM 8271]
gi|324965677|gb|ADY56456.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA
glycosylase [Syntrophobotulus glycolicus DSM 8271]
Length = 273
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 139/294 (47%), Gaps = 40/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEAS--VLGKAILSAH 56
MPELPEVE R ++ ++ IG++I K D V+A+D + + ++GK + S
Sbjct: 1 MPELPEVENIRLSLAKNIIGQEIKEFKLFWPDVF-----VNATDLDPNDLLIGKKVESLG 55
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R+GK L++ L F MTG IY +G + P K++ L+
Sbjct: 56 RRGKYLFIHLAGSVTLILHFRMTGKLIYYQG--------------EHEPEKHTHAVFYLE 101
Query: 116 DGLELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+G ++ +D R+F +++L+ VP I++LGP+ E +++ F LS KK TIK+
Sbjct: 102 NG-QIHHSDMRKFGRIQLVETALLGKVPAIAKLGPEPFDERFSIEVFGQRLSGKKSTIKS 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ ++GIGN ADE L+ A I P + SL L I+ ++ +E G S
Sbjct: 161 ALLDQETVAGIGNIYADEALFMAGIRPERRTASLKISEVILLYDAIQGALKAGIEAGGTS 220
Query: 234 SQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ F N + R + K V G + GRTT + P Q
Sbjct: 221 FRDYRDGDGNKGLFQENLYVYGRAGQNCK--VCGSVLGKTKTAGRTTVFCPVCQ 272
>gi|319638532|ref|ZP_07993294.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102]
gi|317400281|gb|EFV80940.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102]
Length = 275
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 128/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R IE H GKKI K I + D + G+ +L+ +R+ K
Sbjct: 1 MPELPEVETTLRGIEPHIDGKKIAKVTIRQFK--LRWPVHPDLAQILAGRKVLACNRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + ++ GM+G++ I +A + P K+ DDG L
Sbjct: 59 YLIITFETGIL-LIHLGMSGSLRI---------FTADDERIATPDKHDHLDFVFDDGTVL 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F V P+ E LGP+ L E + L +K +K L+D +
Sbjct: 109 RYHDPRKFGAVLWYEGIAEHHPLLEKLGPEPLSEAFDANYLYQKLKTQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I PL+ A L+K+ CA L++ IK ++ +A+E G
Sbjct: 169 VVVGVGNIYANESLFKAGISPLRPANKLTKKECALLVETIKAILLRAIETGGSTLRDFVN 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G I T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNEP--CVQCGGLIFKETLGQRGTFYCPNCQK 275
>gi|82701716|ref|YP_411282.1| formamidopyrimidine-DNA glycosylase [Nitrosospira multiformis ATCC
25196]
gi|123544992|sp|Q2YBI1.1|FPG_NITMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|82409781|gb|ABB73890.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Nitrosospira multiformis ATCC 25196]
Length = 272
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 126/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I G+KI + + N + E ++ G I + R+GK
Sbjct: 1 MPELPEVEVVRRGIASGLEGRKIAGLTVRNPNLRW---PVPELERTLCGLEIRTVTRRGK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + GM+G++ + +A + P K+ + LD G+ L
Sbjct: 58 YLLLDCGAGTL-ILHLGMSGSLRLLALA-----------ANIAPQKHDHIDLLLDKGMVL 105
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF V + T P +S LGP+ L E + +IK +L++
Sbjct: 106 RFRDPRRFGAVLWTTGNATDHPLLSHLGPEPLTEAFDGKLLYSKTRNRSASIKEVLMNSR 165
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A+E L+ A I P A + CA L + IKE + +A+E G S +
Sbjct: 166 IVVGVGNIYANEALFLAGIDPANAAGRIGARRCAGLAQAIKETLGRAIEAGGSSLRDFVG 225
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + +SR +P + G I+ I G R++ Y P QK
Sbjct: 226 SDGNPGYFQQQYWVYSRTGQPCRKC--GTNIEQIRQGQRSSFYCPRCQK 272
>gi|436840691|ref|YP_007325069.1| Formamidopyrimidine-DNA glycosylase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169597|emb|CCO22968.1| Formamidopyrimidine-DNA glycosylase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 274
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + E +GK I I + + V + F + V G+ I HR+ K
Sbjct: 1 MPELPEVEVISRGLSEALVGKTIESVKILNHSSV--KMPWYLFSSRVAGEEITRVHRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L +F MTG + A + P +++ L DG +
Sbjct: 59 LLIMDLGEDLHITFHLKMTGRVLAHEGATS-------------PDTHTRLVFGLADGGSI 105
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F +VR LN+ LGP+ L T + + +K IK LLL+Q
Sbjct: 106 EFHDTRKFGEVRALNNEELQDWDFYRNLGPEPL--ETTAAALAERIEGRKAQIKGLLLNQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL----------- 227
S ++G+GN ADE L+++ IHP A LSK+S L ++ V+++A+
Sbjct: 164 SVVAGVGNIYADESLFRSGIHPKAKASDLSKDSLEKLFSEVQSVLKQAISENGSSIRDYV 223
Query: 228 EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ G D+ F +++ + ++ +P G + T GR+T + + QKL
Sbjct: 224 DAGGDAGGFQNSFKVYGKKGEPCPDC--GHIFEGATVAGRSTTFCSKCQKL 272
>gi|417931306|ref|ZP_12574674.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
SK182B-JCVI]
gi|340776045|gb|EGR98095.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
SK182B-JCVI]
Length = 280
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 19/238 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI----DGVSASDFEASVLGKAILSAH 56
MPELPEVE R +E I +V+S+ D + + + A+ FE + G+ + +
Sbjct: 1 MPELPEVETVRAGLENLVI-PAVVESVDVVDARGLRPSGEPEDAAFFETVLTGRQLTAVS 59
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+GK LW LD GM+G + Q++ +++ + LD+
Sbjct: 60 RRGKYLWFVLDDDTALLAHLGMSGHFRVVDRRAPQHR-------------HTRIVIALDE 106
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G +L F D+R F + L +P P++ + PD E DE L ++ TIK L
Sbjct: 107 GRDLRFLDQRTFGGLTLTPLLDGIPGPVTHIAPDPFEECFDADEVARRLCARRSTIKRSL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LDQ+ +SGIGN ADE L++ + HP LS+ LL+ ++V+ +A+ G S
Sbjct: 167 LDQTLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAVELLQTARDVMAEAMSQGGTS 224
>gi|258544390|ref|ZP_05704624.1| adenylate kinase [Cardiobacterium hominis ATCC 15826]
gi|258520349|gb|EEV89208.1| adenylate kinase [Cardiobacterium hominis ATCC 15826]
Length = 272
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 131/290 (45%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I H +I SI A K+ + ++ + G + R+GK
Sbjct: 1 MPELPEVETTRRGIAPHLENHRI-HSISAHIAKLRQPLDTAELN-RISGHTLTRIERRGK 58
Query: 61 NLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
+L L D P GM+GA+ I A + +K K+ + LD+G E
Sbjct: 59 HLILHSDQPELALHIHLGMSGALRIT-PASSPHK------------KHDHVAITLDNGDE 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L D RRF V L+ DPT P ++ LG + L + KK IK +++Q
Sbjct: 106 LRLHDPRRFGHVALI-DPTRPPASLANLGDEPLDDNFNGARLYAQTRGKKSAIKTHIMNQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA----DSS 234
Y++G+GN A E L+ + IHP + A +L++ C L + IK V++ A+ G D +
Sbjct: 165 RYLTGVGNIYATEALFASAIHPARAATTLTRADCDRLAEAIKTVLQAAIAQGGTTLRDFT 224
Query: 235 Q-------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
Q F + R +P + + +T GGR+T Y Q
Sbjct: 225 QPDGTHGYFAQTLNAYGRSGEPCPRC--QRPLQNMTIGGRSTVYCAHCQH 272
>gi|291302738|ref|YP_003514016.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM
44728]
gi|290571958|gb|ADD44923.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM
44728]
Length = 280
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 28/294 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ IG++I + V +DF A +LG I R+G
Sbjct: 1 MPELPEVETIRRGLDGWVIGRRITDVEVRHPRAVRRHHAGPADFRARLLGTTITGTRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + I+ D + P + + + +
Sbjct: 61 KFLWLPLDSGDALLCHLGMSGQLLIE-----------PPDKPDGPHLRIRLVFDQAEH-Q 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F ++ + D +P I+ + PD + EF+ L ++ +K LLDQ
Sbjct: 109 LRFVDQRTFGEMLVSPDGAELPGEIAHIAPDIYDPAFDLAEFSRRLRARRGEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
S ISG+GN ADE L++A++H + LS L++ I+EV + AL G
Sbjct: 169 SLISGVGNIYADEALWRARLHGNHPSQELSDAVARELVEHIREVFDAALNAGGTSFDALY 228
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
+S F + + R ++P + G ++ I R++ + P Q + G
Sbjct: 229 VNTNGESGYFDRSLAVYGRAEEPCRRC--GTPVERIKFTNRSSFHCPSCQIVPG 280
>gi|402841621|ref|ZP_10890066.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. OBRC7]
gi|423105459|ref|ZP_17093161.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5242]
gi|376380776|gb|EHS93519.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5242]
gi|402282555|gb|EJU31094.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. OBRC7]
Length = 269
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 118/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + VD +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKALEGHPVLAHLGPEPLSDEFNVDYLQAKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECGQLVKVIKLVLLRSIEQGGTT 216
>gi|421728003|ref|ZP_16167160.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella oxytoca M5al]
gi|410371185|gb|EKP25909.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella oxytoca M5al]
Length = 269
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHPALAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|229546724|ref|ZP_04435449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322]
gi|256854275|ref|ZP_05559639.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8]
gi|307275296|ref|ZP_07556439.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134]
gi|307290894|ref|ZP_07570784.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411]
gi|422685455|ref|ZP_16743671.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4000]
gi|229308073|gb|EEN74060.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322]
gi|256709835|gb|EEU24879.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8]
gi|306497964|gb|EFM67491.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411]
gi|306507930|gb|EFM77057.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134]
gi|315029748|gb|EFT41680.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4000]
Length = 280
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQIALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|336179507|ref|YP_004584882.1| formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca
glomerata]
gi|334860487|gb|AEH10961.1| Formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca
glomerata]
Length = 284
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE RR +E G+ I +A V + + A+VL G+ I +A R+G
Sbjct: 1 MPELPEVEVVRRGLERTLPGRTIATVAVAHPRAVRRHAAGAADFAAVLTGRTIEAACRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + + A + DE + F D G E
Sbjct: 61 KYLWLALDSGAALLGHLGMSGQLLV----------VATEKPDE--THLRVRFTFSDAGRE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + ++ VP PI+ + D L + F ++ +++ IK LLDQ
Sbjct: 109 LRFVDQRTFGGLAVVPADAGVPAPIAHIARDPLDPGFSDAGFVAAVRRRRTGIKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ +SGIGN ADE L++A +H + +L++ LL+ ++EV+ +AL G S
Sbjct: 169 TLVSGIGNIYADESLWRAGLHYARPTGTLTRGELNRLLQSVREVLLEALHAGGTS 223
>gi|425056060|ref|ZP_18459520.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 505]
gi|403032459|gb|EJY44013.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium 505]
Length = 278
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLW-TKIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+ +A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEIEQLRLSIIDVLNRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|430819966|ref|ZP_19438610.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0045]
gi|430871240|ref|ZP_19483663.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1575]
gi|430440169|gb|ELA50446.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E0045]
gi|430558197|gb|ELA97624.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1575]
Length = 278
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FE+S++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFESSLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+++A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSIIDVLDRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|421488723|ref|ZP_15936111.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK304]
gi|400367940|gb|EJP20955.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK304]
Length = 274
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K++ +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYPKMVK-TDLDEFQKEVPGQVVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+ +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHIFIRFEDGGT 103
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL N + +LGP+ + + + F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTIELLTPNLLEAYFVSKKLGPEPIEQDFDLQSFQAALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ + + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTADETSAIHNQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTIIEKFQLGGRGTHFCPQCQR 272
>gi|406027127|ref|YP_006725959.1| formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri CD034]
gi|405125616|gb|AFS00377.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri CD034]
Length = 280
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 30/295 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G I +S+ K+I+ + +DF+ ++ GK I R+GK
Sbjct: 1 MPELPEVETVRRGLTQLVKGSTI-QSVDVLYAKMIN-LPPNDFKKALRGKTIEKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL S + + ++G + V+ D K++ L DG +L
Sbjct: 59 YLLIRL------SDNLTIVSHLRMEG-------KYDVEPEDAPVGKHTHIIFHLTDGRQL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L++ T V + +GP+ + +TVD SK + IK LLDQ
Sbjct: 106 RYNDTRKFGRMNLVDTGTEMQVAGLKTIGPEPTEDNLTVDYMQKIFSKSRKVIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL----------- 227
S I+G+GN ADEVL+ +KI+P Q A +L+ L K I + KA+
Sbjct: 166 SNIAGLGNIYADEVLWLSKINPQQPANTLTLRQIKELRKNIIAELAKAIAGHGTTVHSYS 225
Query: 228 EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
++ F + + RE +P G KI I R T + P+ Q L GV+
Sbjct: 226 TAYGEAGSFQNQLNVYGREGEPCPRC--GTKIVKIKLAQRGTHFCPKCQPLRGVK 278
>gi|257081124|ref|ZP_05575485.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol]
gi|256989154|gb|EEU76456.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol]
Length = 280
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHKADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLAAFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|385262563|ref|ZP_10040667.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. SK643]
gi|385190464|gb|EIF37911.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. SK643]
Length = 274
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 136/294 (46%), Gaps = 39/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKI SI K+I +F V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLENLILGKKI-SSIDIRYPKMIK-TDLDEFHKEVSGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLIFYLTDKVLIS-HLRMEGKFFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE-------LGPDALLEPMTVDEFTDSLSKKKITIK 172
L + D R+F + LL P + E LGP+ + E + F +LSK K IK
Sbjct: 104 LVYEDVRKFGTMELL-----APQLLEAYFVSKKLGPEPMEEDFDLQTFQAALSKSKKPIK 158
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
+ LLDQ+ ++G+GN DEVL++A++HP +T+ SL+ + L V+ +A+E G
Sbjct: 159 SHLLDQTLVAGLGNIYVDEVLWRAQVHPARTSQSLTAKEVTALHDQTIAVLGQAVEKGGS 218
Query: 233 SSQFPSNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+ + +N FH K G+ I+ I GGR T + P+ Q+
Sbjct: 219 TIRTYTNAFGEDGTMQDFHQVYGKTGQPCARCSATIEKIQLGGRGTHFCPQCQR 272
>gi|307706468|ref|ZP_07643277.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK321]
gi|307618178|gb|EFN97336.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK321]
Length = 274
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 139/291 (47%), Gaps = 29/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I F+ + G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSIEIRYPKMIK-TDLDQFQKELPGQVVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLTS-HLRMEGKYFYY--------------PDQVPERKHAHIFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + V F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPREQDFDVQVFQAALTKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + I V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQIIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQKLN 279
+N FH K G+ G I+ I GGR T + P+ Q+ N
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQECSRCGTIIEKIQLGGRGTHFCPQCQRRN 274
>gi|427713691|ref|YP_007062315.1| formamidopyrimidine-DNA glycosylase Fpg [Synechococcus sp. PCC
6312]
gi|427377820|gb|AFY61772.1| formamidopyrimidine-DNA glycosylase Fpg [Synechococcus sp. PCC
6312]
Length = 280
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 134/297 (45%), Gaps = 36/297 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E + I+ + V + +F + ++G+++ + R+GK
Sbjct: 1 MPELPEVETVRRGLAELTLDVPILGGEVLYPKTVAYPLDPDEFISGLVGQSLQAWERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L+S + MTG ++ + K + V+ FF G EL
Sbjct: 61 YLIGKLNSRGWLVVHLRMTGQLFWLSQEIPMAKHTRVR----------LFF---GSGQEL 107
Query: 121 SFTDKRRFAKVRLLND----PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F D+R F ++ L P +P ++ LGP+ L TV L IK LL
Sbjct: 108 RFVDQRTFGQMWWLPAADLLPQLMPTLAGLGPEPLGPDFTVSYLAQKLQHPHKPIKNALL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF 236
DQ+ I+GIGN ADE L+ A+IHP L+ TL + IK V++ +L VG +
Sbjct: 168 DQALIAGIGNIYADEALFLAQIHPQARCCDLTPVQIQTLHQKIKAVLQLSLAVGGTTFN- 226
Query: 237 PSNWIFHSRE----KKPGKAFVDGKK----------IDFITAGGRTTAYVPELQKLN 279
F S E G+A+V G+K I I GGR+ + P+ Q L
Sbjct: 227 ----TFTSVEGINGNYGGQAWVYGRKGQPCRVCQTPIQQIRLGGRSAHFCPQCQPLT 279
>gi|422413055|ref|ZP_16490014.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378]
gi|313618758|gb|EFR90663.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378]
Length = 273
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+HP + A +LS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVHPERAANTLSDKEINRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK + G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTGEPCVICGTPIEKIKLNGRGTHFCPHCQK 273
>gi|260892909|ref|YP_003239006.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4]
gi|260865050|gb|ACX52156.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4]
Length = 269
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 38/291 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E IG +I + + + + + D + GK I R+GK
Sbjct: 1 MPELPEVETIRRQLAEKVIGARIKRVEVRRAAVMTNPIPGLDLLS---GKTITGVSRRGK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL L+ F GMTG + ++ E P ++ +ELD G L
Sbjct: 58 WLWLSLEGDLALLFHLGMTGQL-------------VWEEEGELPP-HTHLLIELDRG-RL 102
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD RRF +VRL + E LGP+ L +V ++L++ + IKALLL+Q
Sbjct: 103 RFTDFRRFGRVRLGKSEEIRDYLEEKLGPEPLSPAFSVSYLKNALARSRRPIKALLLEQK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
++G+GN DE L+ A I P + A +L+++ L + IK V+ + + S + N
Sbjct: 163 AVAGLGNIYTDEALFLAGIDPRRPACTLTEDEVKRLHEAIKGVLAEGIRHRGTSIR---N 219
Query: 240 WI--------------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
++ + RE +P G I I GR T + P Q
Sbjct: 220 YVDAEGTPGEHSLFLRVYGREGQPCPRC--GTPIKKIKLSGRGTHFCPHCQ 268
>gi|452853030|ref|YP_007494714.1| Formamidopyrimidine-DNA glycosylase [Desulfovibrio piezophilus]
gi|451896684|emb|CCH49563.1| Formamidopyrimidine-DNA glycosylase [Desulfovibrio piezophilus]
Length = 274
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 43/297 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ G++I + D ++ + A+ +LG+ I+ A+R+ K
Sbjct: 1 MPELPEVEVIARGLDSTLPGRRIALANHVDLTRLSE--PAATLLPRILGRRIVRAYRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L +F MTG + V K+ + F+ LDDG L
Sbjct: 59 VLLIELSEGMTMAFHLKMTGRV--------------VHGPTRRAQKHDRLFLSLDDGSLL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLE-----PMTVDE--FTDSLSKKKITIKA 173
SF+D R+F VR ELG LE P+ D L +K IKA
Sbjct: 105 SFSDMRKFGYVRSFTA-------EELGSWCFLEKCGPEPLETSPRILADRLEGRKGKIKA 157
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHP--------LQTAVSLSKESCATLLKCIKE---V 222
LLL+QS + G+GN ADE L+ A IHP L VSL + + L + I E
Sbjct: 158 LLLNQSVVVGVGNIYADESLFHAGIHPETPGNIISLSRRVSLFTKLQSVLKQAIAENGSS 217
Query: 223 IEKALEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
I + D+ F +N+ + R+ +P + ++ + GR++ + P Q+ N
Sbjct: 218 IRNYVNADGDAGAFQNNFTVYGRKGEPCRTC--KSVLEVVKVAGRSSTFCPRCQRRN 272
>gi|315303333|ref|ZP_07873959.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596]
gi|313628294|gb|EFR96801.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596]
Length = 273
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++ GKKI +I K+I +F ++G+ + R+GK
Sbjct: 1 MPEMPEVENVRATLQNLVPGKKI-NQVIVHVPKMIKNTPPDEFVHMLVGQEMEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G K + +TDE SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG------------KFRLMNETDEV-SKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN-----DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
F D R+F + + N D S I +LGP+ L T++ F + K IK L
Sbjct: 106 RFLDVRKFGTMEVTNKFGEADTNS---IKKLGPEPLTPAFTLEAFATGVKKTSRAIKTAL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ ++GIGN ADE+ ++AK+ P + A SLS + L + K ++ +A+ +G + +
Sbjct: 163 LDQKLVAGIGNIYADEICFEAKVRPERAANSLSNKEIKLLFEATKSIMTEAVALGGSTVR 222
Query: 236 FPSN-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK + G +I+ I GR T + P QK
Sbjct: 223 TYVNSQGELGRYQEKLKVYGKIGEPCVICGTQIEKIKLNGRGTHFCPNCQK 273
>gi|422419165|ref|ZP_16496120.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL N1-067]
gi|422422084|ref|ZP_16499037.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL S4-171]
gi|313633102|gb|EFS00002.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL N1-067]
gi|313637952|gb|EFS03260.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL S4-171]
Length = 273
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++ GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQNLVPGKKI-DQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G K + +TDE SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG------------KFRLMNETDEV-SKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN-----DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
F D R+F + + N D S I +LGP+ L T++ F + K IK L
Sbjct: 106 RFLDVRKFGTMEVTNKFGEADTNS---IKKLGPEPLTPAFTLEAFATGVKKTSRAIKTAL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ ++GIGN ADE+ ++AK+ P + A SLS + L + K ++ +A+ +G + +
Sbjct: 163 LDQKLVAGIGNIYADEICFEAKVRPERAANSLSNKEIKLLFEATKSIMTEAVALGGSTVR 222
Query: 236 FPSN-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK + G +I+ I GR T + P QK
Sbjct: 223 TYVNSQGELGRYQEKLKVYGKTGEPCVICGTQIEKIKLNGRGTHFCPNCQK 273
>gi|394991802|ref|ZP_10384600.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. 916]
gi|393807347|gb|EJD68668.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. 916]
Length = 276
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEELNALPLSQLGPEPDDEAFTAAYLKERLVKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP A SLS TL IK+ +++A++ G +
Sbjct: 167 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + QK
Sbjct: 227 NSQGEIGMFQLKHYVYGKKDEPCKTC--GTMISKIVVGGRGTHFCARCQK 274
>gi|398780567|ref|ZP_10544896.1| formamidopyrimidine-DNA glycosylase [Streptomyces auratus AGR0001]
gi|396998032|gb|EJJ08966.1| formamidopyrimidine-DNA glycosylase [Streptomyces auratus AGR0001]
Length = 263
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 133/280 (47%), Gaps = 25/280 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VEA RR ++ C ++ I D V+ GVSA S+ G+ + R+GK
Sbjct: 1 MPELPDVEAFRRVLDS-CARGAPLRRIEVHDEGVLHGVSARRLRRSLEGRRFAAPQRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + P FGMTG + A + P F V D +L
Sbjct: 60 WLLAPTEKGPTLMLHFGMTGQLLCCPPAEALH-----------PHDRVTFTV--GDDRQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDE--FTDSLSKKKITIKALLLD 177
+ D+R+ + L ++ +V + E GPDAL TVD F D+LS ++ +K+ LLD
Sbjct: 107 RYRDQRKLKGLWLADESAAVARMMENQGPDAL----TVDRPGFEDALSGRRGGLKSALLD 162
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
QS ++G+GN +ADE+L++AK+HP + +L+ + L ++ + A+ G +
Sbjct: 163 QSVLAGLGNLLADEILWRAKLHPARPVGTLTDQELGRLYTHMRRTLRSAVAAGRVPPR-- 220
Query: 238 SNWIFHSR-EKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
W+ R E P D + TA GR T + P Q
Sbjct: 221 RAWLTGRRDEADPVCPRCDERLCSGRTA-GRRTVWCPRCQ 259
>gi|222054672|ref|YP_002537034.1| formamidopyrimidine-DNA glycosylase [Geobacter daltonii FRC-32]
gi|254789439|sp|B9M5V2.1|FPG_GEOSF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|221563961|gb|ACM19933.1| formamidopyrimidine-DNA glycosylase [Geobacter daltonii FRC-32]
Length = 271
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RRA+ GK+I+ + + + + + ++G+ I++ R+GK
Sbjct: 1 MPELPEVETIRRAVGPQVRGKRIIHTNVRATK--LRHPLPPELDRLLVGQLIVAMDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR F GMTG +Y+ VK + K+ + LD L
Sbjct: 59 YLLLRCKGGTI-IFHLGMTGMLYL------------VKASSPH-GKHDHLDLVLDGSYIL 104
Query: 121 SFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD RRF + NDP P + GP+ L + ++KI IK L++D
Sbjct: 105 RFTDPRRFGTIIWTDNDPLQHPLLVAHGPEPLEAEFSASYLYLKRHRRKIPIKQLIMDSR 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
++GIGN A+E L++A I P +A LS + L+ IK V+ A+E G + +
Sbjct: 165 VVAGIGNIYANESLFRAGIAPQTSASDLSPDKDLLLVDAIKGVLTDAVEAGTSNIESALT 224
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
FP + + ++ +P G I + GGR+T + P QK
Sbjct: 225 GERPQGYFPYEFSIYGKKGRPCPKC--GSAIRMMRLGGRSTFFCPLCQK 271
>gi|424765987|ref|ZP_18193349.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium TX1337RF]
gi|431585968|ref|ZP_19520483.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1861]
gi|402412994|gb|EJV45345.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium TX1337RF]
gi|430593146|gb|ELB31132.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1861]
Length = 278
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L I +V+ +A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLHPKEIEQLRLSIIDVLNRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTPIVKTKVAQRGTHYCPNCQRL 274
>gi|319651808|ref|ZP_08005933.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2]
gi|317396460|gb|EFV77173.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2]
Length = 275
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++E IGK I + V F+ ++ G+ R+GK
Sbjct: 1 MPELPEVETVRRTLQELVIGKTIAHVSVFWPKMVKHPEELVQFKDALAGQIFQDIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + + + + ++G R + +E K++ DG EL
Sbjct: 61 FLILY-------TIDYALVSHLRMEG-------RYGLFLKEEPVDKHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P++ LGP+ E T ++ L++ IK LLDQ
Sbjct: 107 RYKDVRKFGTMHLYAKGEEFKTLPLAHLGPEPFGEEFTAEDLAARLARTTRNIKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
I G+GN DE L++++IHP + A SL+K TL K I + + +A++ G +
Sbjct: 167 KTIVGLGNIYVDEALFRSRIHPERAANSLTKSELETLHKEIADTLREAVDKGGSTIRSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ + K V G ++ I GGR T Y P QK
Sbjct: 227 NSQGQIGMFQLELYVYGRKGEDCK--VCGSTLERIVTGGRGTVYCPACQK 274
>gi|409358246|ref|ZP_11236609.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Dietzia alimentaria 72]
Length = 307
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 113/247 (45%), Gaps = 27/247 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H + + IV S+ A + EA + G+ + AHR+G
Sbjct: 1 MPELPEVEVVRRGLADHVVARTIVAASVTGARTARRQPGGAPEIEARLTGRTVSGAHRRG 60
Query: 60 KNLWLRLDSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL LD GM+G + V E ++ EL
Sbjct: 61 KYLWLTLDHEDTAGGDCLLVHLGMSGQML-------------VTTAGEPTVRHLHARAEL 107
Query: 115 DDGLELSFTDKRRFAKVRLLN-----DPTSV---PPISELGPDALLEPMTVDEFTDSLSK 166
DDG EL F D+R F ++ D T V P + + D E ++ +
Sbjct: 108 DDGTELRFVDQRTFGGWTVVPLTEALDGTGVLLPAPAAHIAADPFEAGFDAAEVARTIRR 167
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
K IK LLLDQ+ +SGIGN ADE L+++ IH + + +L+ + LL+ ++V+ A
Sbjct: 168 KNTEIKRLLLDQTVVSGIGNIYADEALWRSGIHGRRRSGALTVRAVTDLLEHARDVMADA 227
Query: 227 LEVGADS 233
L G S
Sbjct: 228 LAAGGTS 234
>gi|254824377|ref|ZP_05229378.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-194]
gi|405755723|ref|YP_006679187.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2540]
gi|293593612|gb|EFG01373.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-194]
gi|404224923|emb|CBY76285.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2540]
Length = 273
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 131/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V GK I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGKPIEKIKLNGRGTHFCPNCQK 273
>gi|433449547|ref|ZP_20412411.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella ceti NC36]
gi|429539061|gb|ELA07099.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella ceti NC36]
Length = 278
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 128/289 (44%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I +S+ +K I ++ +F+A + G+ I R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGQTI-ESVEVRWDKTISNMTPEEFDAEIAGRTIEVVERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL M GA Y P K+ +L D ++L
Sbjct: 60 YLLFRLSGKKTLVSHLRMEGAYYTMPAGTE-------------PGKHDLVTFKLTDDIDL 106
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ND SV ++++GP+ E + ++ K + IK LLDQ
Sbjct: 107 FYRDTRKFGRMALVNDTDVMSVAGLAKIGPEPTEEALDLEYMVTIFGKSRTAIKPFLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL-LKCIKEVIEKALEVGA------ 231
S I+GIGN ADEVL+Q IHPL ++ A L L I E+ G
Sbjct: 167 SKIAGIGNIYADEVLWQTMIHPLTKTNDVTPTELAELRLNIINEMARSIAHHGTTVHSFT 226
Query: 232 ----DSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
++ +F + + R +P G ++ I R T + P+ Q
Sbjct: 227 DAFGEAGEFQNELDVYGRHGEP--CLRCGTELVKIKVAQRGTTFCPKCQ 273
>gi|296270739|ref|YP_003653371.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM
43833]
gi|296093526|gb|ADG89478.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM
43833]
Length = 294
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 36/251 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ I + + V + D A + G+ +LSA R+GK
Sbjct: 1 MPELPEVEVIRRGLERWVAGRAIASAEVLHPRSVRR--NTGDLPARLKGRPLLSAERRGK 58
Query: 61 NLWLRLDS--PPFPS-------FQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSK 109
LWL L P P GM+G + + +G ++ R + D
Sbjct: 59 YLWLPLGDGDPADPREAEEALVVHLGMSGQLLLTDRGAPAERHLRVRLGFAD-------- 110
Query: 110 FFVELDDGLELSFTDKRRFAKVRLLNDPTS------VP-PISELGPDALLEPMTVDEFTD 162
DG EL F D+R F +L P + VP PI+ + PD L E D F
Sbjct: 111 ------DGPELRFVDQRTFGH--MLVAPLASAYGRRVPEPITHIAPDPLEEAFDDDGFAH 162
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
L++++ +K LLDQS ISG+GN ADE L++A++H + +L+ LL ++ V
Sbjct: 163 RLTRRRTGLKRALLDQSLISGVGNIYADEALWRARLHWARATETLTAAEVTELLAQVRAV 222
Query: 223 IEKALEVGADS 233
+ A+ G S
Sbjct: 223 LTDAIAQGGTS 233
>gi|339634095|ref|YP_004725736.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella koreensis KACC 15510]
gi|420161440|ref|ZP_14668205.1| formamidopyrimidine-DNA glycosylase [Weissella koreensis KCTC 3621]
gi|420161577|ref|ZP_14668341.1| formamidopyrimidine-DNA glycosylase [Weissella koreensis KCTC 3621]
gi|338853891|gb|AEJ23057.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Weissella koreensis KACC 15510]
gi|394745115|gb|EJF34011.1| formamidopyrimidine-DNA glycosylase [Weissella koreensis KCTC 3621]
gi|394745417|gb|EJF34301.1| formamidopyrimidine-DNA glycosylase [Weissella koreensis KCTC 3621]
Length = 275
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 27/290 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I+K + + V G+S ++F+A + + I R+GK
Sbjct: 1 MPELPEVETVRRGLTNLVQGRTILKVEVRWEKIV--GMSEAEFDAEMADRKIEKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL M GA Y + T+ P K+ LDD ++L
Sbjct: 59 YLLFRLSGNKTLVSHLRMEGAYY-----------TVPAGTE--PGKHDLITFHLDDEIDL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L++ P + V ++++GP+ + +T+ E+ ++K IK LLDQ
Sbjct: 106 FYRDTRKFGRMNLVDTPNTMQVAGLAKIGPEPTEDDLTL-EYMQKEFQRKGAIKPFLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-----VGADS 233
S+I+G+GN DE L+ AKIHPLQ A ++ E L K I + + A + V + +
Sbjct: 165 SHIAGLGNIYVDETLWMAKIHPLQPANTIDLEHLTHLRKAIIDELALATKNHGTTVHSFT 224
Query: 234 SQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLN 279
+ F F ++ K G+ + G + R T Y P Q L+
Sbjct: 225 TAFGEAGTFQNQLKVYGRVGEPCYRCGTILVKTKVAQRGTTYCPHCQVLH 274
>gi|406970505|gb|EKD94867.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
[uncultured bacterium]
Length = 275
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 32/292 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPE + + GK I K + D + + S F +V GK I S R K
Sbjct: 1 MPELPETHTIAALLNKGLKGKTISKVQVFKDYRALP--STEVFIKAVTGKKIESVKRVAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+ + L + F MTG + + + + + W K + LD+G +L
Sbjct: 59 NILVELSNGTHILFHLAMTGRLLL---------WNDLIGNERW----VKVILHLDNGTKL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F+D R F K +L+ + + GP+ L E T + ++L K+ IK LL+Q
Sbjct: 106 TFSDMRMFGKAAILSPKQTGELAARYGPEPLDENTTPQQLFENLKTKRTNIKNALLNQEI 165
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------- 233
ISG+GN + L+ A I+PL ++ E+ LL I+ V+ +++++G +
Sbjct: 166 ISGLGNIYVTDALFLAGINPLIGTNEVTLETVTRLLDSIRSVLRESIKLGGSTLGDKMYV 225
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
++ + +SREK P V G K+ FI GR T + P Q LN
Sbjct: 226 DPFGREGKYQEYFKIYSREKCP----VCGSKVSFIKISGRGTYFCPVCQPLN 273
>gi|302865862|ref|YP_003834499.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC
27029]
gi|315502407|ref|YP_004081294.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5]
gi|302568721|gb|ADL44923.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC
27029]
gi|315409026|gb|ADU07143.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5]
Length = 285
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE R + + IG++I + V A VL G+ + R+G
Sbjct: 1 MPELPEVETVRVGLAQWVIGRRIAAVEVRHPRAVRRHAPGGAHFADVLAGRTVTGVQRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ V V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPVGAADELHLRVR------------FRFADDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +P I+ + D + + + F +L +K+ IK LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSEGGAELPAEIAHIARDPMDPEFSDEAFVAALRRKRTEIKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ ISG+GN ADE L++AK+H + A +L++ + LL +++V+ +A++ G S
Sbjct: 169 TLISGVGNIYADEALWRAKLHGTRPADALTRPAALRLLGHVRDVLAEAIKQGGTS 223
>gi|335357477|ref|ZP_08549347.1| formamidopyrimidine-DNA glycosylase [Lactobacillus animalis KCTC
3501]
Length = 276
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +++ +G+KI + + ++ A DF+A + + + R+GK
Sbjct: 1 MPELPEVETVRRGLQKLVLGQKIARVEVLYPKMIVG--DADDFKAKLTEQTLEKIERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G Y VK+ + K++ +L DG +L
Sbjct: 59 YLLFRFTNGLTVVSHLRMEGKFY-------------VKEATDPVDKHTHVIFDLADGRQL 105
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +P +++LGP+ + E V +F L KKK IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVQTGSEEKLPGLAKLGPEPVAETFKVADFYQKLQKKKKNIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++G+GN DEVL+Q+KIHP + L+ + L I + KA++ G + +
Sbjct: 166 TLVTGLGNIYVDEVLWQSKIHPETSCQKLTLDQATILHDNIITELAKAIKAGGTTIRSYT 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
F + R +P K G KI I G R T + P Q++
Sbjct: 226 DAFQKIGAFQFELDVYGRTDEPCKRC--GTKIQKIVVGQRGTHFCPHCQQV 274
>gi|347752917|ref|YP_004860482.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1]
gi|347585435|gb|AEP01702.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1]
Length = 277
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+ I + V + F ++ G+ I S R+GK
Sbjct: 1 MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLHTEAFADALAGETIRSLGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D + + + ++G R V D +E K++ G EL
Sbjct: 61 FLIFYTD-------HYALVSHLRMEG-------RYRVYDQNEPVEKHTHMIFHFQSGKEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + S P+S+LGP+ L + T L K + +K+ LLDQ
Sbjct: 107 RYKDVRKFGTMHLFLKGEELSSLPLSKLGPEPLSDTFTEKYLYGQLKKTERNVKSCLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ISG+GN DE L++A I+P + A SL+K+ L I + +++A+E G + +
Sbjct: 167 TVISGLGNIYVDESLFRAHIYPERKAKSLTKKDVHLLHSEIIQTLQEAVEKGGSTVRSYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + G I+ + GR T Y P QK
Sbjct: 227 NSQGQMGMFQLELYVYGRKGEPCRK--CGTPIEKMVTAGRGTHYCPNCQK 274
>gi|372325617|ref|ZP_09520206.1| Formamidopyrimidine-DNA glycosylase [Oenococcus kitaharae DSM
17330]
gi|366984425|gb|EHN59824.1| Formamidopyrimidine-DNA glycosylase [Oenococcus kitaharae DSM
17330]
Length = 274
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 139/289 (48%), Gaps = 27/289 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + ++ +KIV ++ K++ G +F V G + R+GK
Sbjct: 1 MPELPEVETVRRGLSKYFANEKIV-AVQVLYRKLLLG-DPEEFIQQVTGSTVREVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL++ M G R A++D P K+++ +L +G ++
Sbjct: 59 FLLLRLNNRQTIVSHMRMEG-------------RYAIEDGSAQPRKHTEAIFKLANGSQI 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F K++L+ + V ++ +GP+ +T+D L K K IK LLD
Sbjct: 106 FYDDTRKFGKMQLVVTGQETEEVRSLATMGPEPTEATLTLDYLFARLQKSKKAIKGWLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQF- 236
Q+ ++G+GN ADEVL+ +KI+PL+ A +++E L + I + + A++ G +
Sbjct: 166 QNNLAGLGNIYADEVLWMSKINPLRPACRINREEAELLRENIIQELAFAIDQGGSTVHSF 225
Query: 237 --PSNWIFHSREKKPGKAFV------DGKKIDFITAGGRTTAYVPELQK 277
S H ++K V DG ++ I R T Y P QK
Sbjct: 226 IDASGHAGHMQDKLHAYGRVGQPCERDGYELVKIKVAQRGTTYCPHCQK 274
>gi|427440031|ref|ZP_18924560.1| formamidopyrimidine-DNA glycosylase [Pediococcus lolii NGRI 0510Q]
gi|425787863|dbj|GAC45348.1| formamidopyrimidine-DNA glycosylase [Pediococcus lolii NGRI 0510Q]
Length = 279
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 134/294 (45%), Gaps = 34/294 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + ++ V A F A + K I + R+GK
Sbjct: 1 MPELPEVETVRRGLVGLVEGRTIQRVVVRYPKMVTP--EADQFAAELKNKTIETIRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L S Q M + ++G + AV D D+ +K+ ELDDG +L
Sbjct: 59 YLIFDF------SNQLSMVSHLRMEG-------KYAVVDRDQPYNKHDHVIFELDDGQDL 105
Query: 121 SFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+ D R+F R++ PT V + +GP+ E +TVD T +L +K +K+ LL
Sbjct: 106 RYNDTRKFG--RMVLTPTGQEMQVGGLKTIGPEPTPETLTVDYLTKALRSRKRVMKSFLL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA---------- 226
DQS I+G+GN ADEVL+ +KIHP + + SL+ L + I + +A
Sbjct: 164 DQSLIAGLGNIYADEVLWLSKIHPQRRSNSLTDAEIKLLRESIFAELNEAIAAKGTTVFS 223
Query: 227 -LEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
L+ + F + + R+ P I+ I R+T + P Q L
Sbjct: 224 YLDATGHAGSFQNQLHVYHRQGLPCPRC--QTPIEQIKVAQRSTHFCPHCQVLT 275
>gi|227503343|ref|ZP_03933392.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC
49725]
gi|227075846|gb|EEI13809.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC
49725]
Length = 271
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 132/297 (44%), Gaps = 47/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD--DNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE+ R +E + +GK+I IA N+ D ++GK I +A R+
Sbjct: 1 MPELPEVESVRHGVESYVVGKEITSVDIAHPRANRGQD----EPLAGLIVGKEIAAAARR 56
Query: 59 GKNLWLR------LDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
GK +WL +DS F GM+G + I TD S + +
Sbjct: 57 GKFMWLEFVGEDPMDSHRDVLFIHLGMSGQLRIG-------------HTD---SPHRRIT 100
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
V L D EL F D+R F L P S IS +G D L + L KKK +
Sbjct: 101 VVLSDATELHFVDQRTFGY--WLYAPWST--ISHIGLDPLEPDFDIASAARRLRKKKTAV 156
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG- 230
K LLDQ+ +SGIGN ADE L+ A+I P + A +L ++ LL + V+ AL+ G
Sbjct: 157 KTALLDQTLVSGIGNIYADEALWAARISPRKKASALRQKDAVALLAAAQTVMSAALKAGG 216
Query: 231 -----------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+S F + + R +P G I+ GGR++ Y P Q
Sbjct: 217 TSFDSLYVNVNGESGYFARSLAAYGRAGQPCSRC--GTLIERSVIGGRSSHYCPHCQ 271
>gi|118464268|ref|YP_882954.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104]
gi|254776228|ref|ZP_05217744.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
avium ATCC 25291]
gi|166215633|sp|A0QJ66.1|FPG_MYCA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|118165555|gb|ABK66452.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104]
Length = 283
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + + V ++ R + LDDG
Sbjct: 61 KYLWLLLDGRDTALVVHLGMSGQMLLGAVPRAEHVRISAL---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 106 VLSFADQRTFGGWMLADLLEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V+ AL G S
Sbjct: 166 QLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS 225
Query: 234 SQFPSNWI 241
F S ++
Sbjct: 226 --FDSLYV 231
>gi|392951516|ref|ZP_10317071.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Hydrocarboniphaga effusa AP103]
gi|391860478|gb|EIT71006.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Hydrocarboniphaga effusa AP103]
Length = 272
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H +G++I + ++ + K + A DF ++G+ I++ R+GK
Sbjct: 1 MPELPEVETVRRGVEPHVLGRRIERVVVRE--KRLRWPIAEDFVDKLIGRRIVATERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD+ GM+G +++ K V VELDDG L
Sbjct: 59 YLQLVLDNGDRLLVHLGMSGRLFVLRSGHALLKHDHVD-------------VELDDGTLL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSK-KKITIKALLLDQ 178
F D RRF + L + + P+ + +GP+ + E+ +LS+ +K +K+ ++D
Sbjct: 106 RFNDPRRFGAMLLWHSGEPLHPLLATMGPEPFSDEFN-GEYLHTLSRGRKTAVKSFIMDG 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------V 229
+ G GN A E L++A I P + A +S+ L I+EV+ A+E
Sbjct: 165 GVVVGAGNIYAAESLFRAGIRPTRAASDVSRPRYDRLAVAIREVLAAAIEQGGTTLRDYA 224
Query: 230 GADSS--QFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
GAD + F + R+ + + V K I + G R++ + P QK
Sbjct: 225 GADGAPGYFQQVLDVYGRDGEACR--VCAKPIRKLVIGQRSSFFCPNCQK 272
>gi|423100646|ref|ZP_17088353.1| DNA-formamidopyrimidine glycosylase [Listeria innocua ATCC 33091]
gi|370792870|gb|EHN60713.1| DNA-formamidopyrimidine glycosylase [Listeria innocua ATCC 33091]
Length = 273
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D ++ +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENDEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+HP + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVHPERAANSLSDKEINRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK + G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTGEPCVICGTPIEKIKLNGRGTHFCPHCQK 273
>gi|397162898|ref|ZP_10486363.1| formamidopyrimidine-DNA glycosylase [Enterobacter radicincitans DSM
16656]
gi|396095045|gb|EJI92590.1| formamidopyrimidine-DNA glycosylase [Enterobacter radicincitans DSM
16656]
Length = 269
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRL---RWPVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PHELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSEAFNTDYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS++ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSRQECEILVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P + V G I R+T Y QK
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR--VCGTPIMAAKHAQRSTFYCRRCQK 269
>gi|306490859|gb|ADM94978.1| formamidopyrimidine-DNA glycosylase [uncultured candidate division
JS1 bacterium]
Length = 280
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 120/234 (51%), Gaps = 22/234 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ I K+I K I + ++I + +F + G I R+GK
Sbjct: 1 MPELPEVETIRRDLEKKVINKRINK-IKVNLPRLIKKPTIDEFSRRLKGTYITKVSRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-------SKYSKFFVE 113
+ L S F GM+G + + +T+E P K+ F
Sbjct: 60 YILCFLSSGECLVFHLGMSGCL--------------LYETNELPISIIDINKKHFHVFFF 105
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+D ++ + D R+F K+ LL + + LG + L E T+D+FT + KK IK+
Sbjct: 106 FEDNTKMIYNDVRQFGKIWLLKKDDKLTEVESLGLEPLEEDFTIDKFTRIIENKKGNIKS 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
L+++Q +I+GIGN A+E+L++A IHPL+ + SL+ L IK+ + KA+
Sbjct: 166 LIMNQKHIAGIGNIYANEILFRAGIHPLRRSNSLTTHEIKKLYCSIKDTLAKAV 219
>gi|422016709|ref|ZP_16363289.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia burhodogranariea DSM 19968]
gi|414092475|gb|EKT54152.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia burhodogranariea DSM 19968]
Length = 271
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 138/292 (47%), Gaps = 38/292 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +++ + S+ S+ + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNSIQYAVVRNSRL---RWPVSEQIKSLSDEIILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L + + GM+G++ I T+E P K+ + L DG
Sbjct: 58 YLLIELKTG-WIIIHLGMSGSLRIL--------------TEELPEEKHDHVDLILRDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF +D + +S LGP+ L + + SK+KI IK L+D
Sbjct: 103 LRYTDPRRFGAWLWCDDLNTSSVLSHLGPEPLSDEFNAQYLFEQASKRKIAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ G+GN A+E L+ I P + +L+ + L++ IK+V+++++E G + +
Sbjct: 163 VVVGVGNIYANEALFATGISPEKITNTLTLNQSSALVEQIKKVLQRSIEQGGTTLK---- 218
Query: 240 WIFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F + KPG + +V GKK I I G R+T Y P+ QK
Sbjct: 219 -DFLQSDGKPGYFAQQLYVYGKKGEPCAVCGTLIQSIKQGQRSTFYCPQCQK 269
>gi|238897076|ref|YP_002921822.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|329996932|ref|ZP_08302629.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3]
gi|365140995|ref|ZP_09346900.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 4_1_44FAA]
gi|386037118|ref|YP_005957031.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae KCTC 2242]
gi|402778434|ref|YP_006633980.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|424832948|ref|ZP_18257676.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424931209|ref|ZP_18349581.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425074303|ref|ZP_18477406.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425083749|ref|ZP_18486846.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425084939|ref|ZP_18488032.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425093862|ref|ZP_18496946.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428932141|ref|ZP_19005725.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae JHCK1]
gi|449048141|ref|ZP_21731111.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae hvKP1]
gi|238549404|dbj|BAH65755.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328539222|gb|EGF65251.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3]
gi|339764246|gb|AEK00467.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae KCTC 2242]
gi|363653237|gb|EHL92220.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 4_1_44FAA]
gi|402539405|gb|AFQ63554.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405595768|gb|EKB69138.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405598241|gb|EKB71470.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405608354|gb|EKB81305.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405610358|gb|EKB83162.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805396|gb|EKF76647.1| Formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414710394|emb|CCN32098.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426307408|gb|EKV69490.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae JHCK1]
gi|448877108|gb|EMB12078.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella pneumoniae hvKP1]
Length = 269
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|384266457|ref|YP_005422164.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387899497|ref|YP_006329793.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens Y2]
gi|380499810|emb|CCG50848.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387173607|gb|AFJ63068.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens Y2]
Length = 278
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 128/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESAHIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP A SLS TL IK+ +++A++ G +
Sbjct: 169 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 228
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K+ G I I GGR T + QK
Sbjct: 229 NSQGEIGMFQLKHYVYGKKDEPCKSC--GTMISKIVVGGRGTHFCARCQK 276
>gi|295706847|ref|YP_003599922.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319]
gi|294804506|gb|ADF41572.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319]
Length = 277
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 126/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK I + + N + F +++G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD + M + ++G + A+ + E P K+ F DG EL
Sbjct: 61 FLKIVLDD-------YTMVSHLRMEG-------KYALHENAEEPDKHVHVFFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + PP+ LGP+ E + + K IK +LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ + G+GN DE L++A IHP + A L+ E L K I +++A++ G +
Sbjct: 167 NVVVGLGNIYVDEALFRAGIHPERVASQLTDEEYEKLYKEIVATLQEAVKQGGSTIRTYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R+ + K + G I+ GGR T P Q
Sbjct: 227 NTQGQIGMFQQQLYVYGRKGESCK--MCGTPIEKFVVGGRGTHICPNCQ 273
>gi|334133629|ref|ZP_08507174.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF7]
gi|333608842|gb|EGL20129.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF7]
Length = 286
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 37/295 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE RR + +GK I + + ++I + A +L G+ I R+G
Sbjct: 1 MPELPEVETVRRTLSRLVVGKTI-QEVEVRLKRIIQKPEEPELFADLLEGQTIQGVSRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYK---RSAVKDTDEWPSKYSKFFVELDD 116
K L LD GV V+ + R + + + ++ D
Sbjct: 60 KFLRFLLDD-----------------GVLVSHLRMEGRYGLYEASDEVEPHTHVIFRFTD 102
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F + L + S P+ +LG + L E T + F ++ K+ IK L
Sbjct: 103 GTELRYRDVRQFGTMHLFAGEEDLSSKPLHKLGIEPLDESFTFEAFRQAIGKRSTKIKPL 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG---- 230
LL+Q+YI G+GN DE L++A IHP + A SL++ L + I ++ ++E G
Sbjct: 163 LLNQAYIVGLGNIYVDEALFRAGIHPEREAASLTRLELQRLHEAIVHTLQSSVEAGGSSI 222
Query: 231 -------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+S F + + R KP G I+ GGR T + Q L
Sbjct: 223 KSYVNGQGESGNFQHSLNIYGRNGKP--CVNCGSLIEKTVVGGRGTHFCLTCQPL 275
>gi|323342140|ref|ZP_08082373.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322464565|gb|EFY09758.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 273
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ GK+I SI K+++ S E +++G + HR+GK
Sbjct: 1 MPELPEVETIIRTLEKSLKGKQI-DSINFIYPKLLEDQSEYSLE-NLVGSNFKAFHRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LW + + M G ++ D D+ PSK++ + D G +
Sbjct: 59 YLWFEMSNGLHWILHLRMEGKFHLY-------------DYDKAPSKHTHCVINYDGG-TI 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D R+F+++ ++ DP LG + + + + K +K++LLDQS
Sbjct: 105 HYLDTRKFSRMAVVKDPLKYLETKNLGYEPFDSNLNGEYVYQKIHHSKRVMKSILLDQSI 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD-------- 232
I+GIGN ADE+L++ +IHPL T ++ + C +L++ K ++ A++ G
Sbjct: 165 IAGIGNIYADEILFETQIHPLTTGSKITMKQCDSLVETTKIILRNAIKAGGTTVRSYTSS 224
Query: 233 ---SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
S +F N + R P + I GR+T + + QK+
Sbjct: 225 LNVSGRFQINLNAYGRAGDPCSRC--NSIMKRIVVSGRSTVFCEKCQKV 271
>gi|94987079|ref|YP_595012.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis
PHE/MN1-00]
gi|442555915|ref|YP_007365740.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis N343]
gi|94731328|emb|CAJ54691.1| Formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis
PHE/MN1-00]
gi|441493362|gb|AGC50056.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis N343]
Length = 279
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 42/299 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E G+ + + + + V +S ++ GK R+GK
Sbjct: 1 MPELPEVETIVRTLEPIINGRMCLNYTVYNQDSVQGDISLDVLIGAIFGKPF----RRGK 56
Query: 61 NLWLRL---DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
L + L DS +Y + + R V D P+ +++ LDDG
Sbjct: 57 LLLIPLVIKDS------------HVYTLCIHLKMTGRILVYPQDRCPTTHTRVSFSLDDG 104
Query: 118 LELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVD--EFTDSLSKKKITIK 172
+ F D R+F VR+L+ +P P + LGP EP+ +D F + ++ IK
Sbjct: 105 NTIFFEDIRKFGYVRILSTTEEPVW-PFWNTLGP----EPLEIDVSTFIERFRGRRGNIK 159
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
+LLL+Q I+G GN ADE L++A+I P+ T LS ES ATL ++EV+ +A+
Sbjct: 160 SLLLNQRVIAGCGNIYADESLFRAQISPMATVSQLSMESIATLYHALQEVLLEAIASCGS 219
Query: 233 SSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
S + F ++ + R KP V K ++ GGR T + Q +NG
Sbjct: 220 SIKDYRAADGNVGAFQNSLNVYGRFGKP--CVVCKKDLEGTRIGGRMTVWCSSCQPING 276
>gi|291294733|ref|YP_003506131.1| formamidopyrimidine-DNA glycosylase [Meiothermus ruber DSM 1279]
gi|290469692|gb|ADD27111.1| formamidopyrimidine-DNA glycosylase [Meiothermus ruber DSM 1279]
Length = 268
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 46/294 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E + +G++I + + D + + A G+ +L R+GK
Sbjct: 1 MPELPEVETTRRILEPYLLGQRIQQLLHQDPARYRNTERAE-------GRRVLGTSRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD GMTG + P ++++ + L L
Sbjct: 54 YLIIHLDENLELIVHLGMTGGFRFE------------------PHRHTRVTLHLPHQ-TL 94
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD RRF K ++ D + + +GP+ L + T+ F +L + IK +LL Q
Sbjct: 95 YYTDPRRFGKWWVVEAGDYREIDLLCRMGPEPLSDDFTLAHFQQALRTPR-KIKEVLLAQ 153
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG----ADSS 234
++G+GN ADE L+ ++IHP + A SLS L K I+ V+E+A+E G +D+S
Sbjct: 154 EAVAGVGNIYADESLWLSQIHPERPAASLSSPEVRRLYKAIRVVMERAVEAGGSTLSDAS 213
Query: 235 -----------QFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
QF N + R +P K +I I GGR T + P+ Q+
Sbjct: 214 YRQPDGQPGYFQFQHN--AYDRTGQPCKRKGCTGRIAKIVVGGRGTHFCPQCQQ 265
>gi|406575184|ref|ZP_11050894.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Janibacter hoylei PVAS-1]
gi|404555365|gb|EKA60857.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Janibacter hoylei PVAS-1]
Length = 290
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ I + + V D E + G+ + AHR+G
Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTIETVSLRGERVARRHVPGPRDLEDRLAGRTVTGAHRRG 60
Query: 60 KNLWLRLDSPP--FPS----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL L P P GM+G + V D D+ ++++ V
Sbjct: 61 KYLWLALAEGPDAVPDEGLVVHLGMSGQML-------------VTDPDDAEARHTHARVR 107
Query: 114 LDD-GLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
D G EL F D+R F L + VP I+ + D D + +++ I
Sbjct: 108 FTDAGHELRFVDQRTFGGFALADLVDGVPEGITHIALDPFDPDYDRDVVVRDIKRRRSGI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K +LL+Q+ +SGIGN ADE L++A +H + A SL+K + A LL ++V+ +ALE G
Sbjct: 168 KRVLLNQTVVSGIGNIYADEALWRAGVHGERLASSLTKPAIARLLDHARDVMAQALEQGG 227
Query: 232 DS 233
S
Sbjct: 228 TS 229
>gi|336247768|ref|YP_004591478.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter aerogenes KCTC 2190]
gi|444354123|ref|YP_007390267.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) [Enterobacter
aerogenes EA1509E]
gi|334733824|gb|AEG96199.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter aerogenes KCTC 2190]
gi|443904953|emb|CCG32727.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) [Enterobacter
aerogenes EA1509E]
Length = 269
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGANILHAVV-RNGRLRWPVSEEIYRLS--DEPVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + L +G
Sbjct: 58 YLLLELRHG-WIIIHLGMSGSLRIL--------------SEEQPAEKHDHVDLVLSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHPVLAHLGPEPLSDEFNADYLQQRCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS + C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSHQECEWLVKMIKLVLLRSIEQGGTT 216
>gi|334126199|ref|ZP_08500178.1| formamidopyrimidine-DNA glycosylase [Enterobacter hormaechei ATCC
49162]
gi|419959027|ref|ZP_14475084.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. cloacae GS1]
gi|295095221|emb|CBK84311.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA
glycosylase [Enterobacter cloacae subsp. cloacae NCTC
9394]
gi|333385859|gb|EGK57085.1| formamidopyrimidine-DNA glycosylase [Enterobacter hormaechei ATCC
49162]
gi|388605996|gb|EIM35209.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. cloacae GS1]
Length = 269
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 131/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRL---RWPVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E D + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSEAFNADYLKEKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P +A G I R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCRAC--GTPIIATKHAQRATFYCRQCQK 269
>gi|427391734|ref|ZP_18885958.1| formamidopyrimidine-DNA glycosylase [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425731701|gb|EKU94514.1| formamidopyrimidine-DNA glycosylase [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 312
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 136/332 (40%), Gaps = 78/332 (23%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ RR + +H G++I S+ N+VI A SV+G I + R+GK
Sbjct: 1 MPELPEVESVRRGLVQHAAGQRI-HSVQTFGNRVIRYAPAG--LQSVIGARIRAVARRGK 57
Query: 61 NLWLRLDSPP------------------FPSF----QFGMTGAIYIKGVAVTQYKRSAVK 98
LW LD PS GM+G Q++
Sbjct: 58 FLWFELDDAAGSWAGNASSAAGAADGCGGPSLALVAHLGMSG----------QFR----- 102
Query: 99 DTDEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP---------------- 142
D P ++ + + ++G L F D+R F + P ++ P
Sbjct: 103 -VDSEPERHLRARLLFENGTRLDFIDQRTFGYL----APAALVPTPDGDRGGEGSTGPYI 157
Query: 143 ---ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIH 199
I + D L + V EF +L K +K LLDQ+ ISG+GN ADE L++A IH
Sbjct: 158 PANIVHIARDVLDPALNVPEFERALGAKCTAVKTALLDQTLISGVGNIYADEALFRAGIH 217
Query: 200 PLQTAVSLSKESCATLLKCIKEVIEKALEVG------------ADSSQFPSNWIFHSREK 247
P Q A +L LL + EV+ +AL G +S F + + R
Sbjct: 218 PRQPASTLKMVEITRLLDALGEVLREALRAGGTSFDALYVHVNGESGYFERSLRVYGRAG 277
Query: 248 KPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
K + G + I GGR+ ++ P Q L
Sbjct: 278 K--QCLQCGGVVKRIMQGGRSASFCPCCQPLR 307
>gi|404423974|ref|ZP_11005589.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403652540|gb|EJZ07575.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 288
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 116/253 (45%), Gaps = 29/253 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++EH GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQEHVAGKSITAVRVHHPRAVRRHDAGPADLTARLLGARITGTGRRG 60
Query: 60 KNLWLRLDSPPFPS------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL L + GM+G + + ++D ++ +
Sbjct: 61 KYLWLTLAEDDGQAETEALVVHLGMSGQMLL----------GPLRD-----DRHLRIAAL 105
Query: 114 LDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKK 168
LDDG LSF D+R F +L D T+VP P++ + D L D + L K
Sbjct: 106 LDDGTALSFVDQRTFGGWQLAELVTVDGTAVPQPVAHVARDPLDPRFDRDHVVNVLRHKH 165
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
IK LLDQ+ +SGIGN ADE L++ K++ TA L++ A LL EV+ AL
Sbjct: 166 SEIKRQLLDQTVVSGIGNIYADEALWRTKVNGASTAALLTRRKLAELLDAAAEVMTDAL- 224
Query: 229 VGADSSQFPSNWI 241
G + F S ++
Sbjct: 225 -GQGGTSFDSLYV 236
>gi|452975464|gb|EME75283.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sonorensis L12]
Length = 275
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + IGK I I N + +F ++G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLAGLVIGKTIESVEIRWTNIIKRPAEPEEFARLLIGETIQSVDRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD F M + ++G + + E K+ DG EL
Sbjct: 61 FLLFHLD-------HFTMVSHLRMEG-------KYGLHQNGEPMDKHVHVIFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+ +LGP+ + T+ + L K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEEQTELPLKQLGPEPFSDEFTIGYLRERLKKTSRFVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A IHP A L+K+ A L + I + +++A+E G +
Sbjct: 167 KTVVGLGNIYVDEALFRAGIHPETAANKLTKKQTALLHEEIIKTLKEAVEAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++R+ +P K G I+ GGR T + QK
Sbjct: 227 NSQGEIGMFQLQLFVYNRKDEPCKK--CGTVIEKTVVGGRGTHFCATCQK 274
>gi|288933010|ref|YP_003437069.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22]
gi|290511803|ref|ZP_06551171.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55]
gi|288887739|gb|ADC56057.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22]
gi|289775593|gb|EFD83593.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55]
Length = 269
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +I+ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|253752113|ref|YP_003025254.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84]
gi|253753938|ref|YP_003027079.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7]
gi|253755187|ref|YP_003028327.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407]
gi|386580297|ref|YP_006076702.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis JS14]
gi|386582312|ref|YP_006078716.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SS12]
gi|386588499|ref|YP_006084900.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis A7]
gi|251816402|emb|CAZ52033.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84]
gi|251817651|emb|CAZ55399.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407]
gi|251820184|emb|CAR46549.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7]
gi|319758489|gb|ADV70431.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis JS14]
gi|353734458|gb|AER15468.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SS12]
gi|354985660|gb|AER44558.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis A7]
Length = 275
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 138/292 (47%), Gaps = 29/292 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L S M G +Y A D+ P+ K+ F DG
Sbjct: 59 YLLIYLTDHVLIS-HLRMEG----------KYNFFA----DQVPANKHFHAFFTFIDGST 103
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D + ++GP+ E ++EF L+K K IK+ LLD
Sbjct: 104 LVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
QS ++G+GN DEVL++AK+HP QT+ LS + A L + EV++ +E G + +
Sbjct: 164 QSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSTDQVADLRQATIEVLQLGIEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVDGK-KIDFITAGGRTTAYVPELQKLNG 280
N + + K G+A + +I I GGR T + P+ Q +G
Sbjct: 224 KNALGMDGTMQDYLQVYGKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKHG 275
>gi|152972481|ref|YP_001337627.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|166215630|sp|A6TFM6.1|FPG_KLEP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|150957330|gb|ABR79360.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 269
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|312901579|ref|ZP_07760852.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470]
gi|311291374|gb|EFQ69930.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470]
Length = 280
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLASFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+ A+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWHAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|386841414|ref|YP_006246472.1| hypothetical protein SHJG_5331 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101715|gb|AEY90599.1| hypothetical protein SHJG_5331 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794709|gb|AGF64758.1| hypothetical protein SHJGH_5095 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 262
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 123/277 (44%), Gaps = 19/277 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR +E C +++ ++ D V+ GV ++ G+ R GK
Sbjct: 1 MPELPDVEGFRRVLET-CATGRVIHRVVVRDAGVLHGVGPCGLRDALEGRRFTEPERHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L P FGMTG R D D+ Y + L G +L
Sbjct: 60 WLLAHTGDGPTVLLHFGMTG-------------RLVCGDPDDAVEPYDRVLFTLSGGRQL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D+R+ + L +D + + GPDAL ++ EF +L+ ++ +K L DQS
Sbjct: 107 RYRDQRKLQGLWLAHDDCEIARRLERQGPDAL--AVSRQEFETALASRRGHVKTALTDQS 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
++G+GN +ADE+L++A++ P + A L++ L ++ + A+ VG + +
Sbjct: 165 VLAGLGNLLADEILWRARLRPDRRASGLAQADRRRLYAHMRRTLRDAVAVGCVPPR--GS 222
Query: 240 WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
W+ R+ G + GR T + P Q
Sbjct: 223 WLTGHRDDPDPVCPRCGSHLRHSRMAGRGTVWCPRCQ 259
>gi|403745854|ref|ZP_10954602.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121198|gb|EJY55522.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 300
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + E G IV + ++I S +DF G+ I + R+GK
Sbjct: 12 VPELPEVETVRRGLAELVSGDVIV-DVQVSLPRIIRYPSVADFVDRATGRTIRAIGRRGK 70
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L D P+ + + ++G QY+ V T E + ++ L G +L
Sbjct: 71 --YLLFDLAPYT-----LVSHLRMEG----QYR---VVPTSEPLALHTHVIFRLASGRDL 116
Query: 121 SFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + LL S P + LGP+ +T SL ++ +KA+LLDQ+
Sbjct: 117 RYRDVRQFGTMDLLLPDESRPSGLQTLGPEPFDSNLTPTLLRSSLQRRTGPVKAVLLDQT 176
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
I+G+GN DE L+ + IHPL+ A L + A LL I++V+ +A+E G S +
Sbjct: 177 IIAGLGNIYVDEALFLSGIHPLEPANRLGPKRLARLLSSIRDVLGRAIEAGGSSIRTYQD 236
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R + + G +I + GR T Y P+ Q+
Sbjct: 237 GYGRHGGFQIQLNVYGRTGEACRQC--GSEIQRMRVSGRGTHYCPQCQR 283
>gi|406586431|ref|ZP_11061362.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD1S]
gi|419813652|ref|ZP_14338465.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD2S]
gi|419817015|ref|ZP_14341186.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD4S]
gi|404466556|gb|EKA11888.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD4S]
gi|404472763|gb|EKA17178.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD2S]
gi|404474111|gb|EKA18431.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD1S]
Length = 274
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K++ +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYPKMVK-TDLDEFQKELNGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+ +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHIFIRFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D V IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLTPDLLDVYFISKKLGPEPREQDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEASAIHDQTIAVLGQAVENGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTMIEKFQLGGRGTHFCPQCQR 272
>gi|156743763|ref|YP_001433892.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM
13941]
gi|189044671|sp|A7NQM8.1|FPG_ROSCS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|156235091|gb|ABU59874.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM
13941]
Length = 283
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 13/233 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ ++ G +I + D ++++ S +F + G+ + R+ K
Sbjct: 1 MPELPEVQHTADSLGIQIAGARIARVERLDWTRMVETPSPDEFIRLLTGRQVRGWDRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + M+G++ V + P K++ + L+DG ++
Sbjct: 61 WILLFLDDGWTLALHLRMSGSL-------------TVHPAEAQPDKHTHLALRLEDGRQI 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + RLL+ + G + L + TV+ L +K IK LLLDQS
Sbjct: 108 FFLDPRKFGRARLLDSAGLAALDAAHGDEPLSDAFTVERLASLLRNRKRAIKPLLLDQSV 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
I+GIGN ADE L++A+IHPL+ A LS A L I+ + +AL G +
Sbjct: 168 IAGIGNIYADEALWRARIHPLRPAADLSAAEVAALHDGIRAALRQALANGGST 220
>gi|326330625|ref|ZP_08196929.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium
Broad-1]
gi|325951466|gb|EGD43502.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium
Broad-1]
Length = 289
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 142/314 (45%), Gaps = 43/314 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H +G +IV + V ++ AS F + G+ + A R+G
Sbjct: 1 MPELPEVEVVRAGLERHVLGARIVAVDVLHPRPVRRHLAGASAFADELKGRVLTGARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD---D 116
K LWL LDS GM+G + ++ A DE ++ + + L+ +
Sbjct: 61 KYLWLPLDSGDALMAHLGMSGQMLVQPPA----------SPDE---RHLRVRIRLEGAAE 107
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G EL F D+R F + + +PP I+ + PD L + + + IK +L
Sbjct: 108 GRELRFVDQRMFGGLSISPGGAELPPEIAHIAPDPLEAAFDAEAVVRWVRRSASGIKRIL 167
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL-------- 227
L+Q+ ISG+GN ADE L++AK+H + L+ LL + +V+ +AL
Sbjct: 168 LNQTVISGVGNIYADEALWRAKLHGERPGERLTAPKVRELLGHVHDVMTEALAQGGTSFD 227
Query: 228 ----EVGADSSQFPSNWIFHSREKKPG-KAFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
V +S F + + RE +P + ++I F+ R++ + P Q
Sbjct: 228 ALYVNVNGESGYFERSLAAYGREGEPCDRCGAPMRRIAFMN---RSSYFCPTCQP----- 279
Query: 283 AAKAVGKPRKQAPK 296
+PR+ PK
Sbjct: 280 ----APRPRRSQPK 289
>gi|251795551|ref|YP_003010282.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2]
gi|247543177|gb|ACT00196.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2]
Length = 287
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 126/292 (43%), Gaps = 30/292 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK+I + + FE ++ G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLIELVAGKRIASVEVKLPRIIQRPAEPEAFEMALAGRTIQTVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + +D S M G R V +DE ++ DDG +L
Sbjct: 61 FLRVVMDGLVLVS-HLRMEG-------------RYGVFPSDEPVELHTHVLFHFDDGTDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALL-EPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F + L T + P+S+LG + L E T D L KK IK LLL+
Sbjct: 107 RYKDVRQFGTMHLFEPGTEFEMKPLSKLGLEPLENEAFTADALKGLLGKKTGLIKPLLLN 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
Q Y+ G+GN DE L+ A IHP +TA SL K L + I + KA+ G S
Sbjct: 167 QEYVVGLGNIYVDEALFLAGIHPERTADSLKKAEWIRLHEAIVSTLAKAVAAGGSSIKSY 226
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
F + + R+ +P + G+ I+ GGR T Q L
Sbjct: 227 VNGQGEMGMFQHQLLVYGRKDEPCASC--GRLIEKSVVGGRGTHTCASCQPL 276
>gi|399517759|ref|ZP_10759296.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc
pseudomesenteroides 4882]
gi|398647285|emb|CCJ67323.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc
pseudomesenteroides 4882]
Length = 277
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 134/288 (46%), Gaps = 27/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IG V ++ KVI G S + F V+ R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGTT-VTAVNVPYPKVITGDSQA-FVTGVMQATFTKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL + Q + + ++G QY + T P K+++ EL D L
Sbjct: 59 YLLLRLSN------QHTIVSHLRMEG----QYSVEPIGTT---PYKHTEIIFELADDRAL 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L ++ P +++LGP+ +T+ ++ SK K IK LLD
Sbjct: 106 FYNDTRRFGRMVLATTGHESLVSPSLAKLGPEPTETDLTLPYMINAFSKSKKPIKTFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ I+GIGN ADEVL+Q+KIHP LSK A L I I +A++ +
Sbjct: 166 QNQIAGIGNIYADEVLWQSKIHPETPTNQLSKLQLAILRTNIIAEIARAIKHHGTTVHSF 225
Query: 238 SNWI-----FHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQ 276
SN F + + G+ G + I G R T + P Q
Sbjct: 226 SNVFGEVGKFQNELEAYGRVGEPCLRCGTPMVKIKVGQRGTTFCPFCQ 273
>gi|419709507|ref|ZP_14236975.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus M93]
gi|382943388|gb|EIC67702.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus M93]
Length = 286
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E + L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLDQ+ +SG+GN ADE L+QA++H + +S+ +L V+ AL G
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWQARVHGRRLTDGMSRAKLTEVLDSAAAVMRLALAQGG 225
Query: 232 DS-----------SQFPSNWI-FHSREKKP----GKAFVDGKKIDFITAGGRTTAYVPEL 275
S S + W+ + RE +P G+A ++ F+ R++ + P
Sbjct: 226 TSFDDLYVNVNGESGYFDRWLEAYGREGEPCRRCGRAM---RREAFMN---RSSYFCPSC 279
Query: 276 QKL 278
Q+L
Sbjct: 280 QRL 282
>gi|338810641|ref|ZP_08622883.1| formamidopyrimidine-DNA glycosylase [Acetonema longum DSM 6540]
gi|337277386|gb|EGO65781.1| formamidopyrimidine-DNA glycosylase [Acetonema longum DSM 6540]
Length = 274
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 127/288 (44%), Gaps = 25/288 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H + K+I I +++ SA +F A VL K I RKGK
Sbjct: 1 MPELPEVETIRRNLESHIVDKQITAVDIFLP-RLVKWPSADEFRARVLKKKINRLERKGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL MTG +YI A TD ++ + + LD L
Sbjct: 60 YLLLRLQGDITLIIHLRMTGQLYIA---------EAGHVTD----RFERIRLHLDSEEVL 106
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++D R ++ D V + LGP+ L EP TV + IK+LLL+Q
Sbjct: 107 VYSDARTLGTWYVMPDHELGRVHGLESLGPEPLSEPFTVSYLAAIFRSRTGKIKSLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-VGADSSQFP 237
I G+GN ADE L A I+P + A SL+ + L + I VI +AL+ G +
Sbjct: 167 ELIGGLGNIYADESLALAGIYPERPANSLNSDELEALHQAINTVISQALQNAGTTFRDYR 226
Query: 238 SNWIFHSREKKPGKAF--------VDGKKIDFITAGGRTTAYVPELQK 277
+ + + + + + G I I GR T Y P+ Q
Sbjct: 227 NGYRQEGHNQHHLRVYGRKGQACPICGSTIVRIETAGRGTHYCPQCQH 274
>gi|47096729|ref|ZP_00234314.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str.
1/2a F6854]
gi|254828201|ref|ZP_05232888.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
N3-165]
gi|254912238|ref|ZP_05262250.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818]
gi|254936565|ref|ZP_05268262.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900]
gi|386047216|ref|YP_005965548.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J0161]
gi|386053817|ref|YP_005971375.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Finland
1998]
gi|404413644|ref|YP_006699231.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC7179]
gi|47014913|gb|EAL05861.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 1/2a str. F6854]
gi|258600589|gb|EEW13914.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
N3-165]
gi|258609160|gb|EEW21768.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900]
gi|293590214|gb|EFF98548.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818]
gi|345534207|gb|AEO03648.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J0161]
gi|346646468|gb|AEO39093.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Finland
1998]
gi|404239343|emb|CBY60744.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC7179]
Length = 273
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|333991296|ref|YP_004523910.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium sp. JDM601]
gi|333487264|gb|AEF36656.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium sp. JDM601]
Length = 278
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 132/295 (44%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H +G+ I + V +D +L I+ R+G
Sbjct: 1 MPELPEVEVVRRGLDAHLVGRTIAGVRVHHPRAVRRHDAGPADLTGRLLDARIVGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L + GM+G + + + T++ R A LDDG +
Sbjct: 61 KYLWLLLSTDEALVVHLGMSGQMLLGDLPDTRHLRIAAV---------------LDDGTK 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+SF D+R F +L + D + VP P++ L D L + + L +K IK
Sbjct: 106 VSFVDQRTFGGWQLTDLVAVDDSVVPLPVAHLARDPLDPRFDAESVVNVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG---- 230
LLDQ+ +SGIGN ADE L++A I + A +LS+ LL+ + V+ AL G
Sbjct: 166 LLDQTVVSGIGNIYADEALWRAGIRGTRMADALSRPRLRALLESARAVMSDALAAGGTSF 225
Query: 231 --------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+S F + + RE +P + G I R++ Y P+ Q+
Sbjct: 226 DSLYVNVNGESGYFSRSLDAYGREDEPCRRC--GTLIRRQKFTNRSSYYCPKCQR 278
>gi|330719264|ref|ZP_08313864.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc fallax KCTC 3537]
Length = 275
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 136/297 (45%), Gaps = 45/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE R +E+ +G +I K I+ D I G AS F A
Sbjct: 1 MPELPEVETVRSGLEKLIVGGEIANIRVPYPKVIMGDAPAFIQGTLASQFTA-------- 52
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R+GK L+LRL + Q + + ++G QY +V+ D K+++ E
Sbjct: 53 -IDRRGKYLFLRLSN------QRTIVSHLRMEG----QY---SVEPLDAPLHKHTEIVFE 98
Query: 114 LDDGLELSFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
L DG L + D RRF ++ L + +VP +++LGP+ + + ++ +K K
Sbjct: 99 LADGRALFYNDTRRFGRMTLAETGLEQIAVPTLAKLGPEPITTDLHLEYMIQIFAKSKKP 158
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-- 228
+K+ LLDQ+ I+GIGN ADEVL+Q+KIHP A L A L I I A++
Sbjct: 159 VKSFLLDQTKIAGIGNIYADEVLWQSKIHPETPANELDPSQLAILRDSIISEIALAIKHH 218
Query: 229 ---------VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V + QF + + R P G + I G R T + P+ Q
Sbjct: 219 GTTVHSFSNVFGEVGQFQNQLEVYGRSGLP--CLRCGTPLVKIRVGQRGTTFCPKCQ 273
>gi|331701575|ref|YP_004398534.1| formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL
B-30929]
gi|329128918|gb|AEB73471.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL
B-30929]
Length = 280
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 30/295 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G I +S+ K+I+ + +DF+ ++ GK I R+GK
Sbjct: 1 MPELPEVETVRRGLTQLVKGSTI-QSVDVLYAKMIN-LPPNDFKKALRGKTIEKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL S + + ++G + V+ D K++ L DG +L
Sbjct: 59 YLLIRL------SDNLTIVSHLRMEG-------KYDVEPEDAPVGKHTHIIFHLTDGRQL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L++ T V + +GP+ + +TVD K + IK LLDQ
Sbjct: 106 RYNDTRKFGRMNLVDTGTEMQVAGLKTIGPEPTEDDLTVDYMQKIFGKSRKVIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL----------- 227
S I+G+GN ADEVL+ +KI+P Q A +L+ L K I + KA+
Sbjct: 166 SNIAGLGNIYADEVLWLSKINPQQPANTLTLRQIKELRKNIIAELAKAIAGHGTTVHSYS 225
Query: 228 EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
++ F + + RE +P G KI I R T + P+ Q L GV+
Sbjct: 226 TAYGEAGSFQNQLNVYGREGEPCSRC--GTKIVKIKLAQRGTHFCPKCQPLRGVK 278
>gi|295397476|ref|ZP_06807559.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC
11563]
gi|294974276|gb|EFG50020.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC
11563]
Length = 285
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 39/296 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID---GVSASDFEASVLGKAILSAHR 57
MPE+PEVE RR +EE IGK IV S+ ++I GV A FE + G+ + R
Sbjct: 2 MPEMPEVETVRRGLEEIVIGK-IVSSVTVTWPRIIQAEGGVEA--FETRMPGQQLEKVGR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDD 116
GK L + +A + + + ++ E P +Y+ L D
Sbjct: 59 VGKFLLFYWTE---------------VTWIAHLRMEGKYLYESTESPVDQYTHVICHLTD 103
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISEL--GPDALLEP--MTVDEFTDSLSKKKITIK 172
G +L + D R+F ++ ++ + I++L GP EP +T D K +IK
Sbjct: 104 GHDLRYRDVRKFGRIHMVEKADTEAEIAKLKLGP----EPNDLTFDYLQKRFDKTTRSIK 159
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
A+LLDQ I+GIGN ADE+L+ AKIHP Q+A SL E ++ + ++ A+EVG
Sbjct: 160 AVLLDQGVIAGIGNIYADEILFAAKIHPEQSARSLYDEEIQAIITESRRIMASAIEVGGT 219
Query: 233 -----SSQFPSNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQKLN 279
++ F N F K GK G +I+ I+ R T + P Q+++
Sbjct: 220 TIRTYTNTFGENGQFADYLKAYGKKGQPCPRCGTEIEKISVAKRGTHFCPYCQRIH 275
>gi|404444993|ref|ZP_11010141.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium vaccae ATCC 25954]
gi|403652897|gb|EJZ07913.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium vaccae ATCC 25954]
Length = 282
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 109/239 (45%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H G++I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAQHVTGRRIAAVRVHHPRAVRRHEAGPADLTARLLDTTITGTDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + V + R A LDDG
Sbjct: 61 KYLWLTLDDGSALVVHLGMSGQMLLGQVPNENHLRIAAL---------------LDDGTT 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F + + D ++VP P++ + D L D L K IK L
Sbjct: 106 LSFVDQRTFGGWMITDLVDVDGSAVPVPVAHIARDPLDPRFDRDAVVKVLRGKHSEIKRL 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L++AKI+ + A +S+ A LL V+ AL G S
Sbjct: 166 LLDQTVVSGIGNIYADESLWRAKINGARPASGVSRAKLAELLDAASAVMTDALAQGGTS 224
>gi|423122718|ref|ZP_17110402.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5246]
gi|376391999|gb|EHT04666.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5246]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE + +G I+ ++I + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPYLVGATILHAVI-RNGRLRWPVSEEIYRLSDI--PVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPGG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRSLEGHPALAHLGPEPLSDDFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECERLVKVIKAVLLRSIEQGGTT 216
>gi|377561843|ref|ZP_09791273.1| formamidopyrimidine-DNA glycosylase [Gordonia otitidis NBRC 100426]
gi|377521038|dbj|GAB36438.1| formamidopyrimidine-DNA glycosylase [Gordonia otitidis NBRC 100426]
Length = 293
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 113/250 (45%), Gaps = 30/250 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E+H +G+ I + V V A D + G IL+A R+G
Sbjct: 1 MPELPEVETVRSGLEKHVVGRTITDVEVLHPRAVRRHVGDAPDLVGRLSGATILAARRRG 60
Query: 60 KNLWLRLDSPP----FP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL + +P F GM+G + + V + V+ T L
Sbjct: 61 KYLWLDVAAPQGDDRFALVVHLGMSGQMLVARVGAPDHTHLRVRAT-------------L 107
Query: 115 DDGLELSFTDKRRF----------AKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG EL F D+R F A L D ++P I+ + PD D+
Sbjct: 108 DDGNELRFVDQRTFGGWHLDDYVDAGEELPGDSGALPRSIAHIAPDPFDPAFDRDDVVRR 167
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
+ K +K LLDQS +SG+GN ADE L++A+++ + +SK A LL EV+
Sbjct: 168 MRGKHTEVKRALLDQSLVSGVGNIYADEALWRARLNGTRVTDGISKAKLAELLDAATEVM 227
Query: 224 EKALEVGADS 233
AL G S
Sbjct: 228 SDALAAGGTS 237
>gi|148265694|ref|YP_001232400.1| formamidopyrimidine-DNA glycosylase [Geobacter uraniireducens Rf4]
gi|189044594|sp|A5G7Q9.1|FPG_GEOUR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|146399194|gb|ABQ27827.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens
Rf4]
Length = 271
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I + +GK+I + + + D ++ + G+ I + R+GK
Sbjct: 1 MPELPEVETTRRGIAPYLVGKRICRVTVRTAKLRLP--LQPDLDSILSGRIISAVERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GMTG + + D P ++ + L+ GL L
Sbjct: 59 YLLVRFTAGTL-ILHLGMTGNLRLV-------------QADTPPGRHDHLDLVLNSGLCL 104
Query: 121 SFTDKRRFAKVRLLND-PTSVPPISELGPDALLEPMTVDEFTDSLSKK----KITIKALL 175
TD RRF+ + +D P +++ GP EP+T D D L K +IT+K +
Sbjct: 105 RLTDPRRFSTIVWTHDDPLRHTLLAKHGP----EPLTGDFSGDYLYTKSRGRRITVKQFI 160
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
+D ++G+GN A E L++A IHP A +LS C L IKEV+ A+ G +
Sbjct: 161 MDSRVLAGVGNIYACEALFRAGIHPETPAGALSTTHCLRLADTIKEVLTDAIASGGSTLG 220
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
FP ++ + R P G I GGR+T + Q
Sbjct: 221 DFLVSEGKPGYFPMSFSVYGRNDAPCPGC--GAPIRRSRQGGRSTYFCDRCQH 271
>gi|290969142|ref|ZP_06560667.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1
str. 28L]
gi|290780648|gb|EFD93251.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1
str. 28L]
Length = 280
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 125/290 (43%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + +G +IV+ + N V+ + F V+GK I R+GK
Sbjct: 1 MPELPEVETVRTHLAPYVVGNRIVQVEVNAPN-VLKNTTVPGFRNRVVGKRIEGLVRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L MTG + R A+++ ++ + L GL L
Sbjct: 60 YLQFLLSGEQAVLVHLRMTGKLLY---------RPALQEEPR-----ARLRLHLQKGL-L 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R F L+ PT VP LGPDA E T L+ KK IKALLLDQ
Sbjct: 105 VYEDVRTFGGFWLVPKTGPTGVPGYDTLGPDAAGEAFTAAYLRQCLAGKKRMIKALLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++G+GN DE L+ A I P + A ++S+ L I V+ + L G +
Sbjct: 165 HVVAGLGNIYVDEALFAAHIRPDRQAATISRTEVGKLHAAIGRVLAQGLAHGGTTIRDFV 224
Query: 234 ---SQFPSNWIF---HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ +N F + RE P G ++ + GR T Y P Q+
Sbjct: 225 DSNGREGTNQSFLQVYGREGMPCPHC--GTRLVYTKVSGRGTRYCPHCQR 272
>gi|307704700|ref|ZP_07641599.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK597]
gi|307621747|gb|EFO00785.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK597]
Length = 274
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 27/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I ++F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYPKMIK-TDLNEFQKELPGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S M G + V + K + V F + +DG L
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYYPYQVPERKHAHV-------------FFQFEDGGTL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + LL D IS+ LGP+ + V F +L+K K IK+ LLDQ
Sbjct: 105 VYEDVRKFGTMELLAPDLLDAYFISKKLGPEPSEQDFDVQVFQAALAKSKKPIKSHLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + + +
Sbjct: 165 TLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTYT 224
Query: 239 NWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
N FH K G+ V G I+ I GGR T + P+ Q+
Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQECVRCGTIIEKIQLGGRGTHFCPQCQR 272
>gi|386043875|ref|YP_005962680.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes 10403S]
gi|404410867|ref|YP_006696455.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC5850]
gi|345537109|gb|AEO06549.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes 10403S]
gi|404230693|emb|CBY52097.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC5850]
Length = 273
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKKIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|348026629|ref|YP_004766434.1| formamidopyrimidine-DNA glycosylase [Megasphaera elsdenii DSM
20460]
gi|341822683|emb|CCC73607.1| formamidopyrimidine-DNA glycosylase [Megasphaera elsdenii DSM
20460]
Length = 274
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 130/293 (44%), Gaps = 37/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++E GK I I ++I +A F A++ G+ + R+GK
Sbjct: 1 MPELPEVETIRAFLDERVRGKAITAVEIGLP-RLIKNTTADRFAAALTGQTLEGVERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS----KFFVELDD 116
L++R P MTG++ +E P +Y+ L +
Sbjct: 60 YLFVRCRGPWSFLVHLRMTGSLLY----------------EEKPGQYAGRAIHLIFTLSE 103
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R + L+ T V LGPDA+ T D D L +K L
Sbjct: 104 G-RLLYRDIRTLGCLWLVPSEGATGVKGYDNLGPDAISPDFTTDRLYDLLKGCHRPVKTL 162
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS- 233
LLDQ+ ++G+GN DE L++A I PL+ + +++K+ A L + I V+++ LE G +
Sbjct: 163 LLDQTKVAGLGNIYVDEALFRAGIRPLRHSDTVTKKEAARLHEAIVAVLQEGLEHGGTTI 222
Query: 234 ----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
Q N + RE P V G I++ GR T Y P+ Q
Sbjct: 223 RNFISGNGKEGQNQDNLRVYGREGTP--CTVCGTTIEYTKLNGRGTHYCPKCQ 273
>gi|374581859|ref|ZP_09654953.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus youngiae
DSM 17734]
gi|374417941|gb|EHQ90376.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfosporosinus youngiae
DSM 17734]
Length = 273
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 34/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H G +I + I + + G FE V G+ I + R+GK
Sbjct: 1 MPELPEVETIRRTLAQHVTGLEI-REIKLIWSSAVCGWEDQSFEYLVTGRRIKTIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RLD MTG + Y S + P K++ +L+ G E+
Sbjct: 60 YLLIRLDEDLTLIAHMRMTGRL-------NYYAES------QEPEKHTHVVFQLEHG-EV 105
Query: 121 SFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F+D R+F +++ + PT + + +LGP+ L T + + KK +++KA LL
Sbjct: 106 HFSDVRKFGRIQAI--PTQLCISGSSLCKLGPEPLEAEFTPEVLKERFGKKTLSLKAALL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
DQ ++G+GN DE L+QA I P + +LS+E + L I+ V++ ++ S +
Sbjct: 164 DQHVLAGLGNIYVDESLFQAGISPERGVDTLSEEEISRLHGAIRNVLQAGIDAQGTSFRD 223
Query: 236 ----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R +P K + G+ ++ I GRTT + + Q+
Sbjct: 224 YRDANGEKGSFERALQVYGRGGEPCK--LCGQALERIRLAGRTTVFCSKCQR 273
>gi|429203997|ref|ZP_19195294.1| putative DNA-formamidopyrimidine glycosylase [Streptomyces ipomoeae
91-03]
gi|428660487|gb|EKX60046.1| putative DNA-formamidopyrimidine glycosylase [Streptomyces ipomoeae
91-03]
Length = 259
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 24/279 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE R + C V + D V+ GV+A+ + G+ + A R GK
Sbjct: 1 MPELPDVEGFREVLMT-CGRHPCVTDVQVRDAGVLWGVTANRLRGELRGRRLGKAWRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L++ D P ++ FGM+G++ D+ + + LDD L
Sbjct: 60 WLFVPTDDGPVLAWHFGMSGSLL-------------CCSPDDPVEAHDRVVFTLDDSRSL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
D+R+ +RL + T+V I +ELGPDAL + DEF + LS ++ +K L+DQS
Sbjct: 107 RCRDQRKLQGLRL-AERTAVDRIEAELGPDAL--AIERDEFLELLSGRRGAVKGALMDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP-- 237
I+G+GN + DE+L++A++HP A LS ++ L+ I + + L+ + P
Sbjct: 164 VIAGLGNLLCDEILWRARVHPRTPARDLSDKT----LRRIHTAMRRVLDTAVRDGRVPPR 219
Query: 238 SNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+W+ R+ K G + + GR T + P+ Q
Sbjct: 220 RSWLTGRRDDSDPKCPRCGPPLSSGSVAGRRTVWCPDCQ 258
>gi|334341037|ref|YP_004546017.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum ruminis DSM
2154]
gi|334092391|gb|AEG60731.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum ruminis DSM
2154]
Length = 277
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 132/292 (45%), Gaps = 30/292 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILS-AHRKG 59
MPELPEVE R++E++ G I I K+I F ++GK IL R+G
Sbjct: 1 MPELPEVETVVRSLEKNLAGLTITGVDIFMP-KIIRSPKPEIFTEQIVGKQILKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L + L MTG R + K++ L++
Sbjct: 60 KYLLIHLSHHVTLVVHLRMTG-------------RLVYCEAGTPLEKHTHVVFHLNNDTM 106
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L FTD R+F ++ L+ + + + + LG + L T + L +K+ IK LLLD
Sbjct: 107 LKFTDIRQFGRMLLVPTDQLSEITGLKNLGLEPLDPSFTREFLKKELRRKRTRIKPLLLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD----- 232
Q +I+G+GN ADEVL+QAK+HP + A+ LS + L + I E+I A+E
Sbjct: 167 QYFIAGLGNIYADEVLFQAKVHPERLALDLSTREVSGLHRAIVEIISGAIEHRGTTFRDY 226
Query: 233 ------SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
S F + ++RE P G+ I I GR++ Y P QKL
Sbjct: 227 VDSEGRSGDFQHHLKVYNREGFPCPR--CGQPISRIKIAGRSSYYCPSCQKL 276
>gi|366089357|ref|ZP_09455830.1| formamidopyrimidine-DNA glycosylase [Lactobacillus acidipiscis KCTC
13900]
Length = 290
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E K+I I K+I G +F + GK R+GK
Sbjct: 12 MPELPEVETVRRELSELVTDKQIT-GIELLYPKIIQG-DPQEFIKELTGKKFEKIDRRGK 69
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S + M + ++G + +VK ++ K++ +LDDG +L
Sbjct: 70 YLLFRF------SGELTMVSHLRMEG-------KYSVKSSEMPLDKHTHVVFDLDDGTQL 116
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T + + +LGP+ E VDEF L KKK IK LLDQ
Sbjct: 117 RYNDVRKFGRMHLVKTGTEDDLAALKKLGPEPTPETFLVDEFYQELQKKKKVIKTALLDQ 176
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
+ ++G+GN DEVL+ KIHP ++ E L I + +A++
Sbjct: 177 TIVAGLGNIYVDEVLWMTKIHPETKCFEITHEQTQKLHDNIILELNRAIKAHGTTVFTFA 236
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGV 281
A+ F + + ++ +P I+ I G R T + P QKL V
Sbjct: 237 GANAEIGSFQNQLNVYGKKGEPCARC--QTPIEKIVVGQRGTHFCPHCQKLISV 288
>gi|154687040|ref|YP_001422201.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
FZB42]
gi|385265799|ref|ZP_10043886.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. 5B6]
gi|154352891|gb|ABS74970.1| MutM [Bacillus amyloliquefaciens FZB42]
gi|385150295|gb|EIF14232.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. 5B6]
Length = 278
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP A SLS TL IK+ +++A++ G +
Sbjct: 169 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 228
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + QK
Sbjct: 229 NSQGEIGMFQLKHYVYGKKDEPCKTC--GTMISKIVVGGRGTHFCARCQK 276
>gi|421844852|ref|ZP_16278008.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411773715|gb|EKS57243.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 269
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 131/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S KA+LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATV-RNGRLRWPVSEEIYRLS--DKAVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WVIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P +A G I RTT Y QK
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRAC--GAPIVATKHAQRTTFYCRRCQK 269
>gi|424714439|ref|YP_007015154.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. LL195]
gi|424013623|emb|CCO64163.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. LL195]
Length = 287
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 15 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 73
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ +D EL
Sbjct: 74 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFEDHTEL 119
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T +F + K IK LLDQ
Sbjct: 120 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQ 179
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 180 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 239
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V GK I+ I GR T + P QK
Sbjct: 240 NSQGKLGQYQDKLKVYGKTDEPCVVCGKPIEKIKLNGRGTHFCPNCQK 287
>gi|254460471|ref|ZP_05073887.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium
HTCC2083]
gi|206677060|gb|EDZ41547.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium
HTCC2083]
Length = 283
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +I K+ + N + + G I R+ K
Sbjct: 1 MPELPEVETVRRGLAPVMESTRIAKADVNRPN--LRWPFPDQMSERLTGAKIERLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
+ LD+ GM+G + I G + Q+ D P+ K+ +++G
Sbjct: 59 YILADLDTGESLLIHLGMSGRMLISGAKIGQFTH------DHPPAEKHDHVVFHMENGAR 112
Query: 120 LSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + LL+ T S +S +GP+ L + L K IK LLD
Sbjct: 113 VTFNDPRRFGAMDLLDTKTADSHKLLSSIGPEPLGNNFDEAYLIEVLKTKGSPIKTALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG------- 230
QS ++G+GN E LY+A I P + A +SK A+L+ I++V+ A++ G
Sbjct: 173 QSVVAGLGNIYVCETLYRAHIAPSRKANKISKPRVASLVPIIRQVLSDAIKAGGSSLKDF 232
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D F ++ + RE +P K G I I GR++ Y P Q+
Sbjct: 233 RQASGDLGYFQHSFDVYGREGEPCKTVDCGNTIKRIVQSGRSSFYCPSCQR 283
>gi|293556213|ref|ZP_06674803.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039]
gi|291601632|gb|EFF31894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039]
Length = 278
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 135/289 (46%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++ +GK I K + K+I+ FEAS++G+ I S R+GK
Sbjct: 1 MPELPEVETVRKGLKRLVVGKTIQKVQVLWP-KIIEQPETPIFEASLVGETIQSIGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G K K+ K++ +DG +L
Sbjct: 60 FLIFHLD-------HYELISHLRMEG------KYQFTKENTPI-DKHTHVLFFFEDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ ++ S I +LGP+ L + + +F + L K IK LLLDQ
Sbjct: 106 RYNDVRKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L++AKIHP Q A +L + L + +V+++A+E G + +
Sbjct: 166 RLVTGLGNIYVDEALWEAKIHPEQPANTLRPKEVEQLRLSVIDVLDRAIEAGGTTIRSYL 225
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
N + H ++ G I R T Y P Q+L
Sbjct: 226 NALGESGGFQVALHVYQQTGKPCIRCGTLIVKTKVAQRGTHYCPNCQRL 274
>gi|270290447|ref|ZP_06196672.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4]
gi|304384671|ref|ZP_07367017.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM
20284]
gi|418068944|ref|ZP_12706224.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Pediococcus acidilactici MA18/5M]
gi|270281228|gb|EFA27061.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4]
gi|304328865|gb|EFL96085.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM
20284]
gi|357537677|gb|EHJ21700.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Pediococcus acidilactici MA18/5M]
Length = 279
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 134/294 (45%), Gaps = 34/294 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + ++ V A F A + K I + R+GK
Sbjct: 1 MPELPEVETVRRGLVGLVEGRTIQRVVVRYPKMVTP--EADQFAAELKNKTIETIRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L S Q M + ++G + AV D D+ +K+ ELDDG +L
Sbjct: 59 YLIFDF------SNQLSMVSHLRMEG-------KYAVVDRDQPYNKHDHVIFELDDGQDL 105
Query: 121 SFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+ D R+F R++ PT V + +GP+ E +T+D T +L +K +K+ LL
Sbjct: 106 RYNDTRKFG--RMVLTPTGQEMQVGGLKTIGPEPTPETLTLDYLTKALRSRKRVMKSFLL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA---------- 226
DQS I+G+GN ADEVL+ +KIHP + + SL+ L + I + +A
Sbjct: 164 DQSLIAGLGNIYADEVLWLSKIHPQRRSNSLTDAEIKLLRESIFAELNEAIAAKGTTVFS 223
Query: 227 -LEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
L+ + F + + R+ P I+ I R+T + P Q L
Sbjct: 224 YLDATGHAGSFQNQLHVYHRQGLPCPRC--QTPIEQIKVAQRSTHFCPHCQVLT 275
>gi|257086218|ref|ZP_05580579.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6]
gi|422722809|ref|ZP_16779358.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2137]
gi|424671007|ref|ZP_18108022.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis 599]
gi|256994248|gb|EEU81550.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6]
gi|315027065|gb|EFT38997.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2137]
gi|402359567|gb|EJU94192.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis 599]
Length = 280
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLSGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+ A+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWHAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|46907795|ref|YP_014184.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. F2365]
gi|47093101|ref|ZP_00230878.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 4b
H7858]
gi|405752786|ref|YP_006676251.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2378]
gi|67460686|sp|Q71ZA3.3|FPG_LISMF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|46881064|gb|AAT04361.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. F2365]
gi|47018541|gb|EAL09297.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. H7858]
gi|404221986|emb|CBY73349.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2378]
Length = 273
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V GK I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGKPIEKIKLNGRGTHFCPNCQK 273
>gi|453053099|gb|EMF00569.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 124/247 (50%), Gaps = 31/247 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ + + V ++ A+DF A + G+ + A R+G
Sbjct: 1 MPELPEVEVVRRGLAAWASGRTVASVEVRHPRAVRRHLAGAADFAAQLTGERLGLARRRG 60
Query: 60 KNLWLRLDSPPFPSF--QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD- 116
K LWL L+ P + GM+G + V+ D K+ + + DD
Sbjct: 61 KYLWLPLEGPSGRAVLAHLGMSGQLL-------------VQPEDAPDEKHLRVRLRFDDA 107
Query: 117 -GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-------LEPMTVDE--FTDSLSK 166
G EL F D+R F + L + +VP ++ PD + L+P DE F +L +
Sbjct: 108 AGTELRFVDQRTFGGLSLHD---TVPGSADALPDVISHIARDPLDP-AFDEAAFHAALRR 163
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
++ T+K LLDQS ISG+GN ADE L+++++H + L++ A LL I+EV+ +A
Sbjct: 164 RRTTVKRALLDQSLISGVGNIYADEALWRSRLHFDRPTAGLTRPRTAELLTHIREVMNEA 223
Query: 227 LEVGADS 233
L G S
Sbjct: 224 LAAGGTS 230
>gi|290893965|ref|ZP_06556941.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J2-071]
gi|404408003|ref|YP_006690718.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2376]
gi|290556503|gb|EFD90041.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J2-071]
gi|404242152|emb|CBY63552.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2376]
Length = 273
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ DD EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFDDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F+ + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFSTGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|183597227|ref|ZP_02958720.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827]
gi|188023541|gb|EDU61581.1| DNA-formamidopyrimidine glycosylase [Providencia stuartii ATCC
25827]
Length = 269
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 36/291 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +I+ + S+ S+ + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTICYAIVRNSRL---RWPVSEQIKSLSDEMILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + + GM+G++ R +++ E K+ + L DG L
Sbjct: 58 YLLIELKNG-WIIIHLGMSGSL-----------RILLEELPE--EKHDHVDLVLKDGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF +D + +S LGP+ L + + K+KI IK L+D
Sbjct: 104 RYTDPRRFGAWLWCDDLETSRVLSHLGPEPLSDEFNAQYLFEQAGKRKIAIKPWLMDNKV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+ G+GN A+E L+ A I P + +L+ E L++ IK+V+++++E G + +
Sbjct: 164 VVGVGNIYANEALFAAGISPEKITHTLTLEQSIDLVQQIKKVLQRSIEQGGTTLK----- 218
Query: 241 IFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F + KPG + FV GKK I I G R+T Y P+ QK
Sbjct: 219 DFLQSDGKPGYFAQELFVYGKKGEPCLICGTPILSIKQGQRSTFYCPQCQK 269
>gi|375363319|ref|YP_005131358.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|371569313|emb|CCF06163.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
Length = 278
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFHMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFAPGEERNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP A SLS TL IK+ +++A++ G +
Sbjct: 169 KAVVGLGNIYVDEALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYI 228
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + QK
Sbjct: 229 NSQGEIGMFQLKHYVYGKKDEPCKTC--GTMISKIVVGGRGTHFCARCQK 276
>gi|302024112|ref|ZP_07249323.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05HAS68]
gi|330832409|ref|YP_004401234.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3]
gi|329306632|gb|AEB81048.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3]
Length = 275
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWPS-KYSKFFVELDD 116
L IY+ + + R K D+ P+ K+ F D
Sbjct: 59 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSD 100
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++EF L+K + IK+
Sbjct: 101 GSTLVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSH 160
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS ++G+GN DEVL++AK+HP QT+ LS E A L + EV++ +E G +
Sbjct: 161 LLDQSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSAEQVADLRQATIEVLQLGIEKGGSTI 220
Query: 235 QFPSNWI--------FHSREKKPGKAFVDGK-KIDFITAGGRTTAYVPELQKLNG 280
+ N + + K G+A + +I I GGR T + P+ Q +G
Sbjct: 221 RTYKNALGMDGTMQDYLQVYGKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKHG 275
>gi|41326247|emb|CAF20409.1| FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE [Corynebacterium glutamicum
ATCC 13032]
Length = 277
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 119/236 (50%), Gaps = 29/236 (12%)
Query: 11 RRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLRL 66
RR +E+H +G IV + + A N++ G + EA++ G + +A R+GK LWL L
Sbjct: 2 RRGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAKRRGKFLWLEL 58
Query: 67 -DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
D+P + GM+G + IK + D S + + VELD+G
Sbjct: 59 IDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHLRAKVELDNGD 105
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
E+ F D+R F L + VP +S + D L E +L +K IK LLL+
Sbjct: 106 EVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSRKSEIKRLLLN 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V+ KAL G S
Sbjct: 166 QEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKALAQGGTS 221
>gi|397699269|ref|YP_006537057.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis D32]
gi|397335908|gb|AFO43580.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis D32]
Length = 280
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQCHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL A L + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVAKLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|406706871|ref|YP_006757224.1| formamidopyrimidine-DNA glycosylase Fpg [alpha proteobacterium
HIMB5]
gi|406652647|gb|AFS48047.1| formamidopyrimidine-DNA glycosylase Fpg [alpha proteobacterium
HIMB5]
Length = 287
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 117/235 (49%), Gaps = 5/235 (2%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ ++ IGKKI K +I + N + FE + K +++ +R K
Sbjct: 1 MPELPEVEIVRLSLSKNIIGKKINKVLIRNRN--LRFKLKFSFEKHLKNKFVINIYRFSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYI-KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + L+ F GM+G I+I K Y ++ + P K++ + +D L
Sbjct: 59 YLIIELNDKSFCIIHLGMSGTIHILKKNKKNIYTNTSFYHSPGLPKKHNHVEISFND-LT 117
Query: 120 LSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L + D RRF +++ N GP+ + +D + KK IK+ LLDQ
Sbjct: 118 LVYNDPRRFGFFQIVKNKENLTNRFKNYGPEPFDKNFNLDYMANYFKDKKKDIKSFLLDQ 177
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
++SGIGN A+E+LY +KI+P L K L+K K+V+ A++ G +
Sbjct: 178 KFVSGIGNIYANEILYLSKINPKIPVKKLKKTQFKLLIKNSKKVLLNAIKKGGST 232
>gi|309800253|ref|ZP_07694429.1| formamidopyrimidine-DNA glycosylase [Streptococcus infantis SK1302]
gi|308116106|gb|EFO53606.1| formamidopyrimidine-DNA glycosylase [Streptococcus infantis SK1302]
Length = 274
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 142/294 (48%), Gaps = 39/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I F+ + G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKIA-SLDIRYPKMIK-TDLDQFQKELHGQELQSMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L F +T + I + + + + D+ P K++ + +DG
Sbjct: 59 YLL------------FYLTDKVLISHLRM---EGKYLYYPDQVPERKHAHVLIHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE-------LGPDALLEPMTVDEFTDSLSKKKITIK 172
L + D R+F + LL P + E LGP+ + ++ F +L K K IK
Sbjct: 104 LVYEDVRKFGTMELL-----APELLEAYFLSKKLGPEPTEQDFDLEIFRGALKKSKKPIK 158
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
+ LLDQ+ ++G+GN DEVL++AK+HP +T+ SLS + L EV+ +A+E G
Sbjct: 159 SHLLDQTLVAGLGNIYVDEVLWRAKVHPARTSNSLSAQEARKLHDQTIEVLGQAVEKGGS 218
Query: 233 SSQFPSNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+ + +N FH K G+A G I+ I GGR T + P+ Q+
Sbjct: 219 TIRTYTNAFGEDGTMQDFHQVYDKAGQACSRCGSIIEKIQLGGRGTHFCPKCQR 272
>gi|206576628|ref|YP_002236003.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342]
gi|238066645|sp|B5XTG8.1|FPG_KLEP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|206565686|gb|ACI07462.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342]
Length = 269
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +I+ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGVTILHAIV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|256957262|ref|ZP_05561433.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5]
gi|257077764|ref|ZP_05572125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1]
gi|294781290|ref|ZP_06746636.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1]
gi|307267955|ref|ZP_07549343.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248]
gi|422696553|ref|ZP_16754510.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1346]
gi|422711660|ref|ZP_16768587.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0027]
gi|422720356|ref|ZP_16776974.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0017]
gi|422729867|ref|ZP_16786262.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0012]
gi|422866952|ref|ZP_16913556.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TX1467]
gi|256947758|gb|EEU64390.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5]
gi|256985794|gb|EEU73096.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1]
gi|294451626|gb|EFG20082.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1]
gi|306515596|gb|EFM84123.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248]
gi|315032492|gb|EFT44424.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0017]
gi|315034274|gb|EFT46206.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0027]
gi|315149640|gb|EFT93656.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0012]
gi|315174877|gb|EFU18894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1346]
gi|329577870|gb|EGG59291.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TX1467]
Length = 280
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL A L + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVAKLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|163847434|ref|YP_001635478.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus
J-10-fl]
gi|189044586|sp|A9WDC2.1|FPG_CHLAA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|163668723|gb|ABY35089.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus
J-10-fl]
Length = 278
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ G+ I D K++ S +F A + G+ I + R+ K
Sbjct: 1 MPELPEVETVARSLAPQLQGRTITGLAKLDWPKMLTP-SPDEFAALIAGRRIEAIGRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD + M+G + + A +T E +++ F ++LD+G L
Sbjct: 60 WLLLSLDGEWTLAIHLRMSGQLLV-----------AEPETSE--ARHVHFALDLDNGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D+R+F +V LL+ + GP+ L T + L ++ IKALLLDQ
Sbjct: 107 IFNDQRKFGRVHLLDRQGLAALDAVHGPEPLAADFTPSALAERLQNRRAPIKALLLDQHL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
I+GIGN A+E L+ A+IHPL L+ E L I+ V+++A+
Sbjct: 167 IAGIGNIYANEALWLARIHPLTPGAMLTPEQINELHHAIRHVLQEAI 213
>gi|262040684|ref|ZP_06013922.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042048|gb|EEW43081.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 269
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYLLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|423110942|ref|ZP_17098637.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5243]
gi|376377422|gb|EHS90191.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5243]
Length = 269
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +++ P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEDLPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|254392459|ref|ZP_05007639.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
clavuligerus ATCC 27064]
gi|197706126|gb|EDY51938.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
clavuligerus ATCC 27064]
Length = 286
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 116/236 (49%), Gaps = 19/236 (8%)
Query: 4 LPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKGKNL 62
+PEVE RR ++ G+ I + + V ++ A DF A + G ++ A R+GK L
Sbjct: 1 MPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRGKYL 60
Query: 63 WLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--GLE 119
WL L D+ GM+G + V+ D K+ + + DD G E
Sbjct: 61 WLPLADTDSSVLGHLGMSGQLL-------------VQPEDAADEKHLRIRISFDDSLGTE 107
Query: 120 LSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D+R F + L N P +P I+ + D L D F +L K+ T+K LLD
Sbjct: 108 LRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLD 167
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
QS ISG+GN ADE L++A++H + SL++ A LL I++V+ AL G S
Sbjct: 168 QSLISGVGNIYADEALWRARLHYERPTASLTRPRSAELLGHIRDVMNAALAAGGTS 223
>gi|424757300|ref|ZP_18185054.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R508]
gi|402407373|gb|EJV39905.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R508]
Length = 280
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLAAFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A L ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADFLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|424780998|ref|ZP_18207864.1| Formamidopyrimidine-DNA glycosylase [Catellicoccus marimammalium
M35/04/3]
gi|422842418|gb|EKU26870.1| Formamidopyrimidine-DNA glycosylase [Catellicoccus marimammalium
M35/04/3]
Length = 272
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 138/298 (46%), Gaps = 48/298 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + +++K +I +I+G DF ++GK I R GK
Sbjct: 1 MPELPEVETVCRGLRP-LVQNRMIKEVIITRPSIIEG-KEEDFRQIMVGKTIKGIARHGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L+ S M G + V DE K++ LD+G EL
Sbjct: 59 YIIFILNEGYLLS-HLRMEG-------------KYRVTKKDEPLEKHTHVRFLLDNGEEL 104
Query: 121 SFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPM--TVDEFTDSLSKKKITIKALLLD 177
+ D R F K+ L N + +S +G EP +EF L K + IK++LL+
Sbjct: 105 RYQDVRAFGKMCYLPNKEALITALSHVGK----EPWDKNEEEFYQELKKYRSAIKSVLLN 160
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q ISG+GN DEVL++A++HP A ++KE A++LK +E+++ A+E G +
Sbjct: 161 QKVISGLGNIYVDEVLFKAQVHPETKANEITKEESASILKASQEILQAAIEAGGST---- 216
Query: 238 SNWIFHSREKKPGK--AF-----VDGKK----------IDFITAGGRTTAYVPELQKL 278
H+ + GK A+ V GKK I+ I GGR T + P Q +
Sbjct: 217 ----IHTYKNAEGKSGAYQKQLQVYGKKGEPCPRCQTPIEKIKVGGRGTHFCPNCQPI 270
>gi|339496613|ref|ZP_08657589.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 277
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 134/288 (46%), Gaps = 27/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ IG V ++ KVI G S + F V+ R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIIGAT-VTAVNVPYPKVITGDSQA-FVTGVMQATFTKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL + Q + + ++G QY + T P K+++ EL D L
Sbjct: 59 YLLLRLSN------QHTIVSHLRMEG----QYSVEPIGTT---PYKHTEIIFELADDRAL 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L ++ P +++LGP+ +T+ ++ SK K IK LLD
Sbjct: 106 FYNDTRRFGRMVLATTGHESIVSPSLAKLGPEPTEVDLTLPYMINAFSKSKKPIKTFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ I+GIGN ADEVL+Q+KIHP LS+ A L I I +A++ +
Sbjct: 166 QNQIAGIGNIYADEVLWQSKIHPETPTNQLSESQLAVLRSNIISEIARAIKHHGTTVHSF 225
Query: 238 SNWI-----FHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQ 276
SN F + + G+ G + I G R T + P Q
Sbjct: 226 SNVFGEVGKFQNELEAYGRVGEPCLRCGTPMVKIKVGQRGTTFCPFCQ 273
>gi|410459278|ref|ZP_11313030.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus azotoformans LMG 9581]
gi|409930471|gb|EKN67470.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus azotoformans LMG 9581]
Length = 277
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 31/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + GKKI + + + + S F+ + G++I+ R+GK
Sbjct: 1 MPELPEVETVRRTLVKLVKGKKIDRVEVFWPKIIKEPADVSQFQFLLKGQSIVDIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G R + +E K++ DG EL
Sbjct: 61 FLKFILDD-------YTLVSHLRMEG-------RYGLYKQEEPYDKHTHVLFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F + L N+ +P +++LG + E TV+ + L K IK LLD
Sbjct: 107 RYRDVRKFGTMHLFPKGNEEKELP-LNQLGVEPFSEEFTVEYLRERLKKTDRKIKVALLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q + G+GN DE L++A IHP ++A SL+ + L + I + + +A+E G + +
Sbjct: 166 QKIVVGLGNIYVDEALFRAGIHPERSANSLTHKEMKLLHQEIIDTLHEAVEKGGSTIRSY 225
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F +S++ +P + G I+ T GGR T Y P+ QK
Sbjct: 226 VNSQGEIGLFQLELFVYSKKGEPCQN--CGTPIEKTTVGGRGTHYCPKCQK 274
>gi|311742942|ref|ZP_07716750.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM
15272]
gi|311313622|gb|EFQ83531.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM
15272]
Length = 284
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 30/243 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-------DFEASVLGKAIL 53
MPELPEVE R + +H +G+ + D +V+D S DF + G+ ++
Sbjct: 1 MPELPEVEVVRLGLVDHVVGRTV------SDVRVLDARSLRRHLPGPVDFADRLRGRTVV 54
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFV 112
A R+GK LWL LD + GM+G + I T++ P ++ + +
Sbjct: 55 DACRRGKYLWLPLDDGSALTAHLGMSGQMLIG--------------TEQTPDPRHLRVGL 100
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKIT 170
+LDDG L F D+R F + + + + P ++ + D L +EF+ L +++
Sbjct: 101 DLDDGTRLHFVDQRIFGGLAVSDQVSDGVPAAMAHIARDPLDPAFDAEEFSARLRRRQTG 160
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+K LLDQ+ +SGIGN ADE L++ +H + L + L++ + +V+ ALE G
Sbjct: 161 VKRALLDQTLVSGIGNIYADEALWRVPLHYARNTRHLRRAEIDALVEHVTDVMRAALEQG 220
Query: 231 ADS 233
S
Sbjct: 221 GTS 223
>gi|386722146|ref|YP_006188472.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus mucilaginosus K02]
gi|384089271|gb|AFH60707.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Paenibacillus mucilaginosus K02]
Length = 280
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 129/291 (44%), Gaps = 29/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + + + F+A + G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLNVLVAGKTIERVSVHLARIIQHPDDIETFKALLEGETIQEVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D +F + + ++G R V + D+ ++ DG EL
Sbjct: 61 FLRIHTD-------RFTLVSHLRMEG-------RYGVYEADDPLELHTHVVFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + P+ +LG + L E T + F ++ +K IK LLL+Q
Sbjct: 107 RYKDVRQFGTMHIYERGRDLEEKPLKKLGLEPLDEAFTFEAFRSRIAGRKTKIKPLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
YI GIGN DE L+ A IHP + A +L+K L + I + + A+E G S
Sbjct: 167 EYIVGIGNIYVDESLFLAGIHPEREADTLTKAEMIRLHQAIIQTLTDAVEAGGSSIKSFV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
F ++ + R+ +P G I+ GGR T P+ QK+
Sbjct: 227 NGQGEMGMFQHSFRVYGRKNEPCPNC--GHAIEKTVVGGRGTHTCPKCQKM 275
>gi|365968406|ref|YP_004949967.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae EcWSU1]
gi|365747319|gb|AEW71546.1| Formamidopyrimidine-DNA glycosylase [Enterobacter cloacae EcWSU1]
Length = 279
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +I+ + SD ++ K ILS R+ K
Sbjct: 11 MPELPEVETSRRGIEPHLVGATILHAIVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 67
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 68 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 112
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 113 LRYTDPRRFGAWLWTKELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNK 172
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 173 LVVGVGNIYASESLFAAGIHPDRLASSLSSQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 232
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 233 SDGKPGYFAQELQVYGRKGEPCR--VCGTPIIATKHAQRATFYCRQCQK 279
>gi|300859742|ref|ZP_07105830.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD
Ef11]
gi|300850560|gb|EFK78309.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD
Ef11]
Length = 280
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + + I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLASQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|423126386|ref|ZP_17114065.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5250]
gi|376397958|gb|EHT10588.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5250]
Length = 269
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I ++ K V + + +G L
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRILSEELSAEKHDHVD-------------LVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELQGHPVLAHLGPEPLSDEFNADYLQAKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 164 VVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|379012971|ref|YP_005270783.1| formamidopyrimidine-DNA glycosylase Fpg [Acetobacterium woodii DSM
1030]
gi|375303760|gb|AFA49894.1| formamidopyrimidine-DNA glycosylase Fpg [Acetobacterium woodii DSM
1030]
Length = 270
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 131/291 (45%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ IGK+I K + DN + +A F S+ G+ I R GK
Sbjct: 1 MPELPEVETVRRTLKNFIIGKEITKITVHYDNIITGDTNA--FVTSLTGQTIRDIDRVGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L LD+ F S M G I VA ++ P +K+ DG E
Sbjct: 59 YLIFILDTQAFIS-HLRMEGKYNI--VAASK------------PLNKHEHLSFLFSDGSE 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVD--EFTDSLSKKKITIKALL 175
L + D R+F ++ L+N T P+ +LGP EP D + K + IK LL
Sbjct: 104 LRYQDTRKFGRLELVNKETYRHDLPLCKLGP----EPWDADPQAIYRKIHKSNLPIKTLL 159
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQS ++GIGN A+E+ ++ KIHP LSK+ A L+ E++ +A+ G +
Sbjct: 160 LDQSLMAGIGNIYANEICFRMKIHPATPGKRLSKKRVAELIDVSTEILTQAITQGGTTIH 219
Query: 236 -FPSNWI-----FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
F +N I + V I GR T Y P QK G
Sbjct: 220 SFDANGITGLFQVQLQVHLQKNCSVCNGAITKEMVRGRGTYYCPTCQKKQG 270
>gi|375257988|ref|YP_005017158.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella oxytoca KCTC 1686]
gi|365907466|gb|AEX02919.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Klebsiella oxytoca KCTC 1686]
Length = 269
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKALEGHPVLAHLGPEPLSDEFNADYLQAKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|373459582|ref|ZP_09551349.1| formamidopyrimidine-DNA glycosylase [Caldithrix abyssi DSM 13497]
gi|371721246|gb|EHO43017.1| formamidopyrimidine-DNA glycosylase [Caldithrix abyssi DSM 13497]
Length = 272
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVID--GVSASDFEASVLGKAILSAHRK 58
MPELPEVE R + +GK I + +D G+S S G+ I R+
Sbjct: 1 MPELPEVETVVRELRPLIVGKTIDRVEAIWQKTFVDQAGLSLS-------GQIIQKIDRR 53
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
GK + L L+ + MTG + + + D + P + + ++ DG
Sbjct: 54 GKFIILVLNRS-YLIVHLRMTGRLSLS---------NGQGDLSDLP--HLRCLIQFKDGS 101
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D R+F ++ + + V + +G DAL +T + F D L +K+ +KA L+ Q
Sbjct: 102 RLLFEDMRKFGRIYHVKEVEEV--LKNVGIDALDTHLTFEHFYDYLKNRKMGVKAFLMSQ 159
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-VGADSSQFP 237
+I+G+GN DE L+ AKIHP QT +S L ++E++ +A+E +G+ S +
Sbjct: 160 KWIAGLGNIYTDESLFLAKIHPEQTCDQISPGQGRKLFTAVQEILHRAVENMGSTISDYR 219
Query: 238 -------SNWIFHSREKKPGK-AFVDGKKIDFITAGGRTTAYVPELQKLNG 280
N ++ ++ GK F G I+ GR T + P+ QKL G
Sbjct: 220 DAYGNPGRNQLYFKVYRRAGKPCFACGALIEKKKVAGRGTHFCPQCQKLRG 270
>gi|310816813|ref|YP_003964777.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare
Y25]
gi|385234411|ref|YP_005795753.1| DNA glycosylase [Ketogulonicigenium vulgare WSH-001]
gi|308755548|gb|ADO43477.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare
Y25]
gi|343463322|gb|AEM41757.1| DNA glycosylase [Ketogulonicigenium vulgare WSH-001]
Length = 286
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 20/292 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + + + + D + GK +LS R+ K
Sbjct: 1 MPELPEVETVRRGLLPVMEGQVIAAADVRRPD--LRWPFPPDMAQRLTGKRVLSLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GM+G + I GV + +Y+ + P K+ +++ G +
Sbjct: 59 YILADLDSAETLLIHLGMSGRMLISGVMIGEYEHA-----RALPEKHDHVVLDMAGGARI 113
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ P I+ LGP+ + L+ +K IK+ LLDQ
Sbjct: 114 AFNDARRFGAMDLMATDAVDQNPLIAVLGPEPFGNDFSPAYLAARLAGRKTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN EVL++A+IHP + A L+ L+ I++V+++A+ G S +
Sbjct: 174 HIVAGLGNIYVCEVLFRARIHPARLAGDLTALEADRLVPLIRDVLDEAIRAGGSSLRDYQ 233
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
F + + RE +P + I GR++ + P Q ++
Sbjct: 234 KTDGTLGYFQHAFQVYGREGQPCSTPGCIGTVARIVQAGRSSFFCPLCQAIH 285
>gi|300741696|ref|ZP_07071717.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567]
gi|300380881|gb|EFJ77443.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567]
Length = 331
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 123/278 (44%), Gaps = 59/278 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R + H +G I + I D+ + + S DF + G I A+R+G
Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVHILDERSIRRHIGGSADFTMRLEGTRIRGAYRRG 60
Query: 60 KNLWLRL---DSPPFPS--------------FQFGMTGAIYIKGVAVTQYKRSAVKDTDE 102
K +WL L D P P GM+G + +K T E
Sbjct: 61 KYMWLTLSASDDEPSPKPGDSDDTLLPYALVIHLGMSGQLLVK--------------TPE 106
Query: 103 WPS-KYSKFFVELDDG-------LELSFTDKRRFAKVRLLNDPTSVPPISELG-----PD 149
+P+ K+ K +EL+ +EL F D+R F + L +P + L P+
Sbjct: 107 FPAEKHLKIVLELEPANDDIGKTIELRFVDQRIFGGMFLSEVVPGIPAGASLAGAEEIPE 166
Query: 150 ALLEPMTV--------DEFTDSLSKKKIT------IKALLLDQSYISGIGNWVADEVLYQ 195
LL P V D + D ++I IK LLLDQS +SGIGN ADE L++
Sbjct: 167 ELLVPEAVEHIGRDPVDPYFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALWR 226
Query: 196 AKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
A+IH + A SLS L + +V+ +AL G S
Sbjct: 227 ARIHYAKPAKSLSAAQTRELFAAVHQVLTEALHAGGTS 264
>gi|217964289|ref|YP_002349967.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23]
gi|386008335|ref|YP_005926613.1| mutM [Listeria monocytogenes L99]
gi|386026937|ref|YP_005947713.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes M7]
gi|217333559|gb|ACK39353.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23]
gi|307571145|emb|CAR84324.1| mutM [Listeria monocytogenes L99]
gi|336023518|gb|AEH92655.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes M7]
Length = 273
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ DD EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFDDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCIVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|453078060|ref|ZP_21980794.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus triatomae BKS 15-14]
gi|452757695|gb|EME16097.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodococcus triatomae BKS 15-14]
Length = 287
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 20/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G ++ + V + D A + G ++ +A R+G
Sbjct: 1 MPELPEVEVVRRGLTAHVVGSRMDAVEVLHPRAVRRHLPGGDDLVARLTGLSVTAAQRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL +D GM+G + ++ V + K+ + ELD G
Sbjct: 61 KYLWLEVDPGDLAVVVHLGMSGQMLVQTPDVAR-------------EKHLRILAELDSGA 107
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
EL F D+R F L D T+VP P++ + D L D ++ +K+ +K
Sbjct: 108 ELRFVDQRTFGGWALAPLVEVDGTAVPEPVAHIARDPLDPLFDPDVAIAAIRRKQSEVKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+LLDQ+ +SG+GN ADE L++++IH + A L++ LL + EV+ +AL G S
Sbjct: 168 VLLDQTVLSGVGNIYADEALWRSRIHGNRPADRLTRPQVRLLLDSVTEVMTEALAQGGTS 227
>gi|418421370|ref|ZP_12994544.1| formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus
subsp. bolletii BD]
gi|363996450|gb|EHM17665.1| formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus
subsp. bolletii BD]
Length = 286
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ D V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHDRAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E V L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLITVDGSELPEPVAHIARDPLDELFEVRAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---- 227
K LLDQ+ +SG+GN ADE L++A++H + +S+ +L V+ AL
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWRARVHGRRLTDGMSRAKLTEVLDSAAAVMRLALAQGG 225
Query: 228 --------EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
V +S F + + RE +P + G+ + R++ + P Q+L
Sbjct: 226 TSFDDLYVNVNGESGYFDRSLEAYGREGEPCRRC--GRAMRREAFMNRSSYFCPSCQRL 282
>gi|384160437|ref|YP_005542510.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens TA208]
gi|328554525|gb|AEB25017.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus amyloliquefaciens TA208]
Length = 276
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 125/288 (43%), Gaps = 25/288 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFNMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ G+GN DE L++A IHP A SLS L IK+ +++A++ G + +
Sbjct: 167 KAVVGLGNIYVDEALFRAGIHPETKANSLSDGQIKKLHTEIKDTLQEAIDAGGSTVRSYI 226
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N +F R GK G I I GGR T + QK
Sbjct: 227 NSQGEIGMFQLRHYVYGKKDEPCKTCGTMISKIVVGGRGTHFCARCQK 274
>gi|403718445|ref|ZP_10943321.1| formamidopyrimidine-DNA glycosylase [Kineosphaera limosa NBRC
100340]
gi|403208466|dbj|GAB98004.1| formamidopyrimidine-DNA glycosylase [Kineosphaera limosa NBRC
100340]
Length = 302
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 117/254 (46%), Gaps = 34/254 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE R + +H +G+ ++ + + + A+D V G + +A R+G
Sbjct: 1 MPELPEVEVVRAGLADHVVGRDLLAATLTGTRVARRHLPGAADLVDRVTGTHVQAARRRG 60
Query: 60 KNLWLRL----DSP--------PFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK 106
K LWL L D P PF GM+G + ++ D +
Sbjct: 61 KYLWLELVRGHDLPVQGSDREAPFALVIHLGMSGQLLVQA-----------PDAPDPKHL 109
Query: 107 YSKFFVELDDGLELSFTDKRRFAKVRLL------NDPTSVP-PISELGPDALLEPMTVDE 159
+++F EL DG EL F D+R F + L D VP P++ +GPD +
Sbjct: 110 HARF--ELSDGRELRFVDQRTFGGLSLAELLPSKRDGQPVPEPVTHIGPDPFEATFDLPL 167
Query: 160 FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCI 219
++ IK LLDQ +SGIGN ADE L++A IH + A L+K + LL
Sbjct: 168 AVRRFKARRSAIKRALLDQQLVSGIGNIYADEALWRAGIHGQRYAEDLTKPALTRLLGHA 227
Query: 220 KEVIEKALEVGADS 233
++V+ ALE G S
Sbjct: 228 RDVMAAALEAGGTS 241
>gi|315282487|ref|ZP_07870891.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120]
gi|313613871|gb|EFR87611.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120]
Length = 273
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + + I +LGP+ L E T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTSKYGEAETRSIKKLGPEPLTEAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ + AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFAAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGKA----FVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GKA + G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKAGESCVICGTPIEKIKLNGRGTHFCPNCQK 273
>gi|302537166|ref|ZP_07289508.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C]
gi|302446061|gb|EFL17877.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C]
Length = 289
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 26/244 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V ++ DF A + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVAAVEVLHPRAVRRHLAGGPDFAARLAGQTIGVPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L+ GM+G + ++ DE + F + D G
Sbjct: 61 KYLWLPLEGRDLSVLGHLGMSGQLLVQ----------PADAPDEKHLRIRLRFAD-DTGT 109
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-------LEPMTVDE--FTDSLSKKKI 169
EL F D+R F + L +VP +E PD + L+P+ DE + +L K+
Sbjct: 110 ELRFVDQRTFGGLSLHE---TVPGSAEGLPDVIAHIARDPLDPL-FDEGAYHLALRAKRT 165
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
T+K LLDQS ISG+GN ADE L++A++H + +L++ A LL ++EV+ AL V
Sbjct: 166 TVKRALLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRSAELLTHVREVMNAALAV 225
Query: 230 GADS 233
G S
Sbjct: 226 GGTS 229
>gi|347548947|ref|YP_004855275.1| putative formamidopyrimidine-DNA glycosylase [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346982018|emb|CBW86003.1| Putative formamidopyrimidine-DNA glycosylase [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 273
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 130/290 (44%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++ GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQNLVPGKKI-DQVIVRVPKMIKNTPPDEFVHMLVGQQIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G K + +TDE SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG------------KFRLMNETDEV-SKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N V I +LGP+ L T++ F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKFGEVDTNSIKKLGPEPLTPTFTLEAFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++GIGN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G +
Sbjct: 166 KLVAGIGNIYADEICFEAKVRPERAANSLSNKEIKLVFEATKSIMTEAVALGGSTVRTYV 225
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
++ + R +P + G I+ I GR T + P QK
Sbjct: 226 NSQGELGRYQEKLKVYGRTGEP--CVICGTPIEKIKLNGRGTHFCPNCQK 273
>gi|294501499|ref|YP_003565199.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551]
gi|294351436|gb|ADE71765.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551]
Length = 277
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 126/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E GK I + + N + F +++G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD + M + ++G + A+ + E P K+ F DG EL
Sbjct: 61 FLKIVLDD-------YTMVSHLRMEG-------KYALHENAEEPDKHVHVFFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + PP+ LGP+ E + + K IK +LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ + G+GN DE L++A IHP + A L+ E L + I +++A++ G +
Sbjct: 167 NVVVGLGNIYVDEALFRAGIHPERVASQLTDEEYEKLYEEIVATLQEAVKQGGSTIRTYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R+ + K + G I+ GGR T P Q
Sbjct: 227 NTQGQIGMFQQQLYVYGRKGESCK--MCGTPIEKFVVGGRGTHICPNCQ 273
>gi|386361306|ref|YP_006059551.1| formamidopyrimidine-DNA glycosylase Fpg [Thermus thermophilus
JL-18]
gi|383510333|gb|AFH39765.1| formamidopyrimidine-DNA glycosylase Fpg [Thermus thermophilus
JL-18]
Length = 267
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ + + + D + + A G+ IL R+GK
Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQVVHHDPARYRNTALAE-------GRRILEVDRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ GMTG ++ T + R+A+ + +G L
Sbjct: 54 FLLFALEGGVELVAHLGMTGGFRLE---PTPHTRAAL----------------VLEGRTL 94
Query: 121 SFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F D RRF RLL D +P + LGP+ L E F L + +KALLL
Sbjct: 95 YFHDPRRFG--RLLGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLL 152
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS--- 233
DQ +G+GN ADE L++A++ P + A SL++E L + ++EV+ +A+E+G +
Sbjct: 153 DQRLAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLHRALREVLAEAVELGGSTLSD 212
Query: 234 ----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F ++ + RE P A G+ ++ GR T + P Q
Sbjct: 213 QSYRQPDGLPGGFQAHHAVYGREGLPCPA--CGRPVERRVVAGRGTHFCPTCQ 263
>gi|169630336|ref|YP_001703985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus ATCC
19977]
gi|419714447|ref|ZP_14241863.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus M94]
gi|420864681|ref|ZP_15328070.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0303]
gi|420869470|ref|ZP_15332852.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0726-RA]
gi|420873915|ref|ZP_15337291.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0726-RB]
gi|420910873|ref|ZP_15374185.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0125-R]
gi|420917326|ref|ZP_15380629.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0125-S]
gi|420967761|ref|ZP_15430965.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0810-R]
gi|420983877|ref|ZP_15447044.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0728-R]
gi|421008680|ref|ZP_15471790.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0119-R]
gi|421013850|ref|ZP_15476928.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0122-R]
gi|421018794|ref|ZP_15481851.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0122-S]
gi|421024368|ref|ZP_15487412.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0731]
gi|421029996|ref|ZP_15493027.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0930-R]
gi|421035823|ref|ZP_15498841.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0930-S]
gi|421044269|ref|ZP_15507269.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0116-S]
gi|238688908|sp|B1MDL2.1|FPG_MYCA9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|169242303|emb|CAM63331.1| Formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium
abscessus]
gi|382945566|gb|EIC69860.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus M94]
gi|392063397|gb|EIT89246.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0303]
gi|392065390|gb|EIT91238.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0726-RB]
gi|392068940|gb|EIT94787.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0726-RA]
gi|392110217|gb|EIU35987.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0125-S]
gi|392112867|gb|EIU38636.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0125-R]
gi|392168873|gb|EIU94551.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
6G-0728-R]
gi|392196828|gb|EIV22444.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0119-R]
gi|392200705|gb|EIV26310.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0122-R]
gi|392207424|gb|EIV33001.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0122-S]
gi|392211165|gb|EIV36731.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0731]
gi|392223216|gb|EIV48738.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0930-R]
gi|392224318|gb|EIV49839.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0930-S]
gi|392233722|gb|EIV59220.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
4S-0116-S]
gi|392250268|gb|EIV75742.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
3A-0810-R]
Length = 286
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 46/303 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E + L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---- 227
K LLDQ+ +SG+GN ADE L+QA++H + +S+ +L V+ AL
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWQARVHGRRLTDGMSRAKLTEVLDSAAAVMRLALAQGG 225
Query: 228 --------EVGADSSQFPSNWIFHSREKKP----GKAFVDGKKIDFITAGGRTTAYVPEL 275
V +S F + + RE +P G+A ++ F+ R++ + P
Sbjct: 226 TSFDDLYVNVNGESGYFDRSLEAYGREGEPCRRCGRAM---RREAFMN---RSSYFCPSC 279
Query: 276 QKL 278
Q+L
Sbjct: 280 QRL 282
>gi|311113799|ref|YP_003985021.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC
17931]
gi|310945293|gb|ADP41587.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC
17931]
Length = 332
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 125/279 (44%), Gaps = 60/279 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R + H +G I + I D+ + + S DF + I A+R+G
Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVRILDERSIRRHIGGSADFTTCLERTRIRGAYRRG 60
Query: 60 KNLWLRLDSP---PFPS--------------FQFGMTGAIYIKGVAVTQYKRSAVKDTDE 102
K +WL L +P PFP GM+G + +K T E
Sbjct: 61 KYMWLTLSAPEDEPFPKRGDSDDTLLPYALVIHLGMSGQLLVK--------------TPE 106
Query: 103 WPS-KYSKFFVELD--DG------LELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALL 152
+P+ K+ K +EL+ DG EL F D+R F + L N +P S G + +
Sbjct: 107 FPAEKHLKIVLELEPADGESTNKATELRFVDQRIFGGMFLSNLVPDIPAGTSSAGAEEIS 166
Query: 153 EPMTVDEFTDSLSK------------KKIT------IKALLLDQSYISGIGNWVADEVLY 194
E V E + + + ++I IK LLLDQS +SGIGN ADE L+
Sbjct: 167 EEFLVPEAVEHIGRDPVDPSFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALW 226
Query: 195 QAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+A+IH + A SLS L + +V+ +AL G S
Sbjct: 227 RARIHYAKPAKSLSAAQTRELFAAVHQVLTEALHAGGTS 265
>gi|428220211|ref|YP_007104381.1| formamidopyrimidine-DNA glycosylase Fpg [Synechococcus sp. PCC
7502]
gi|427993551|gb|AFY72246.1| formamidopyrimidine-DNA glycosylase Fpg [Synechococcus sp. PCC
7502]
Length = 279
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 36/297 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ E ++I+ S I + + + +F + GK ILS HR+GK
Sbjct: 1 MPELPEVETVRRSLHESTCDRQIISSEILLERTIAYPHNPEEFNLGLKGKRILSWHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + + MTG + ++ + + ++ + + EL
Sbjct: 61 YLLAELSNDSWLGVHLRMTGKLLWCDRSLPIHTHTRIR-------------IYFANQQEL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPP------ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
F D+R F ++ L+ P+ + P + +LG + + + L K IK
Sbjct: 108 RFNDQRTFGQMWLV--PSGINPEEIISGVQKLGMEPFDPNFNYEYLQNKLRKSDRPIKNS 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL------- 227
LLDQ+ I+GIGN ADE L+ + IHP + L+K +L++ I+ V+ +
Sbjct: 166 LLDQTVIAGIGNIYADESLFLSGIHPQTKSNQLTKSQLESLVQAIRRVLSDGITHGGTTF 225
Query: 228 ----EVGADSSQF-PSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
++G D + S W+F R +P K V I I GGR+T + P+ Q ++
Sbjct: 226 SDFVDIGGDKGNYIHSAWVF-RRTGQPCK--VCSGVIARIKLGGRSTHFCPKCQPIS 279
>gi|441178348|ref|ZP_20970024.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440614521|gb|ELQ77786.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 286
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 17/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V + A DF + G+ I A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVRGRTVAEVEVRHPRAVRRHTAGAVDFATRLKGQRIGEARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL + GM+G + ++ +D + +F + D G E
Sbjct: 61 KYLWLPVTDGLSVLAHLGMSGQLLVQP-----------QDAPDEKHLRIRFTFDDDAGTE 109
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L + DP +P I+ + D L F ++L +++ T+K
Sbjct: 110 LRFVDQRTFGGLSLHDAVPGDPEGLPDVIAHIARDPLDPAFDDAAFHEALRRRRTTVKRA 169
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L+++++H + + ++ A LL I++V+ AL VG S
Sbjct: 170 LLDQSLISGVGNIYADEALWRSRLHYDRPTATFTRPRTAELLGHIRDVMSAALAVGGTS 228
>gi|387130142|ref|YP_006293032.1| formamidopyrimidine-DNA glycosylase [Methylophaga sp. JAM7]
gi|386271431|gb|AFJ02345.1| Formamidopyrimidine-DNA glycosylase [Methylophaga sp. JAM7]
Length = 272
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 110/234 (47%), Gaps = 17/234 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H G+ I++ +I D ++ + A D E + G+ IL R+ K
Sbjct: 1 MPELPEVETTRVGIAPHIEGQ-IIERVIVRDYRLRWPIPA-DIEKILTGQQILQVQRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + + GM+G R V DT P+K+ + +GL L
Sbjct: 59 YLLFKTPTGTL-IMHLGMSG-------------RMRVVDTPVKPAKHDHVDITFRNGLTL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD RRF + T + P I LGP+ L E T D K++++IK +++
Sbjct: 105 RFTDPRRFGAMLWTTTSTDLHPLIHHLGPEPLSEDFTGDSLYQRSRKRQVSIKTFIMNAE 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E + A++HP A L++ L IK V+EKA+ G +
Sbjct: 165 IVVGVGNIYASEACFLARLHPEMKAGKLTRPQAERLATAIKTVLEKAIAAGGTT 218
>gi|384919043|ref|ZP_10019105.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. 357]
gi|384467126|gb|EIE51609.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. 357]
Length = 283
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE RR + G +I + + N+ D A L G I R+
Sbjct: 1 MPELPEVETVRRGLAPVMEGARIRHAQV---NRPDLRWPFPDRMAERLTGARIERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + LDS GMTG + + G A+ Q+ V D P K+ ++ DG
Sbjct: 58 KYILADLDSGETLLVHLGMTGRMLVSGDALGQF----VHD-HPAPEKHDHVVFDMQDGAR 112
Query: 120 LSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ T S P ++ LGP+ L + +L + + +K+ LLD
Sbjct: 113 VTFNDPRRFGAMDLMRTATADSHPLLTALGPEPLGNGFHESQLLAALKGRSMPVKSALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q ++G+GN E LY+A +HP + ++++ ATL+ ++ V++ A+ G S +
Sbjct: 173 QKIVAGLGNIYVCEALYRAGLHPQRRVNKIAEKRIATLVPIVRAVLQDAIAAGGSSLRDF 232
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE +P + + + I GR++ + P Q+
Sbjct: 233 RQADGKLGYFQHSFDVYGREGQPCRTPDCAQTVHRIVQSGRSSFFCPTCQR 283
>gi|162147553|ref|YP_001602014.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545659|ref|YP_002277888.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|189044595|sp|A9HI30.1|FPG_GLUDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|161786130|emb|CAP55712.1| putative formamidopyrimidine-DNA glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533336|gb|ACI53273.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 286
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 37/296 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + H GK I + +A + +D A + G I R+ K
Sbjct: 1 MPELPEVETVMRGMRLHLDGKTIAR--VAVRRADLRFPFPADLVARLEGATITGFARRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +RLD+ GM+G + + ++ P ++ FF E DG
Sbjct: 59 YILIRLDTGDTLLLHLGMSGRVLL-----------SLPGDAPVPDRHEHFFFETTDGTRC 107
Query: 121 SFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
D RRF V L+ PT+ ++ LGP+ L + + L++++ +IKA LL
Sbjct: 108 GLIDPRRFGAVDLM--PTAEERAHRLLARLGPEPLGNQFSQHWLQEVLARRRTSIKAALL 165
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
DQ+ ++G+GN E L++A IHP + A +L A L++ I+ V+ +A+ G S +
Sbjct: 166 DQTVVAGLGNIYVSEALFRAGIHPARLACTLDAAEDARLVQAIRAVLREAIAAGGSSLRD 225
Query: 236 ----------FPSNWIFHSREKK-----PGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F W + R + PG G ++ + GR++ + P Q
Sbjct: 226 YVQPDGELGYFQHAWRVYGRAGQGCPDCPGPPACHG--VERLEQAGRSSFFCPLCQ 279
>gi|417939920|ref|ZP_12583208.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK313]
gi|343388801|gb|EGV01386.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK313]
Length = 274
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI IA + +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIEIAYSKMI--KTDLDEFQKEVPGQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ E + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFVSKKLGPEPSEEDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A+IHP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQIHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 272
>gi|284799871|ref|ZP_05985082.2| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703]
gi|284796762|gb|EFC52109.1| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703]
Length = 276
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GKKI K II + + + G+ +L+ +R+ K
Sbjct: 2 MPELPEVETTLRGIASHIDGKKIEKVIIRQFK--LRWPIHPNLAQILAGRKVLACNRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + ++ GM+G++ I +A + P K+ DDG L
Sbjct: 60 YLIITFETGIL-LIHLGMSGSMRI---------FTADDERIAMPDKHDHLDFAFDDGTVL 109
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F V P+ E LGP+ L + + L +K +K L+D +
Sbjct: 110 RYHDPRKFGAVLWYEGIAEHHPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNA 169
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I PL+ A L+K+ CA L++ +K V+++A+E G
Sbjct: 170 VVVGVGNIYANESLFKAGISPLRPANKLTKKECALLVENVKAVLQRAIETGGSTLRDFVN 229
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G I T G R T Y P QK
Sbjct: 230 SDGKSGYFQQEYTVYGRHNEP--CVQCGGLIFKETLGQRGTFYCPNCQK 276
>gi|297617858|ref|YP_003703017.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus
DSM 12680]
gi|297145695|gb|ADI02452.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus
DSM 12680]
Length = 267
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEA-SVLGKAILSAHRKG 59
MPELPEVE +R++ +GK + ++ D V DF + +G I+ R+G
Sbjct: 1 MPELPEVETIKRSLAP-IVGKTVTGLMVLRS----DIVKRCDFGVKNAVGSEIIDVTRRG 55
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L ++L GMTG R + + E + ++ + L+ +
Sbjct: 56 KYLVIKLSCARHLVVHLGMTG-------------RLLMVASSEPIAAHTHMVINLEGEKD 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ + D RRF + + D S LGP+ L +E L ++ +IK +LLDQ
Sbjct: 103 VRYQDPRRFGNISFVKDTGGF--FSSLGPEPLDPSFGPEELARRLKRRSASIKPVLLDQG 160
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
++GIGN ADE+L+ A +HP + A L++ + L IKEVI +A+E +
Sbjct: 161 VVAGIGNIYADEILFAAGLHPARGASELNEYEISRLHAAIKEVITRAIECRGTTFRDYRD 220
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
QF ++ + R +P G+ + GGRTT Y Q+
Sbjct: 221 GFNQPGQFQTHLAVYGRYGQPCPKC--GQPVQKTVIGGRTTHYCAICQE 267
>gi|315648810|ref|ZP_07901905.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453]
gi|315275778|gb|EFU39130.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453]
Length = 278
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 125/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + + GK I + + + A F + + R+GK
Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDQVSVHLPRIIQRPDDAEAFAFMLKDHTVQGVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD S M G R + +E K++ DG EL
Sbjct: 61 FLRILLDGLVLVS-HLRMEG-------------RYGLYRAEEPVEKHTHVIFHFSDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+++LG + L + T+ F + KK IKA+LL+Q
Sbjct: 107 RYKDVRQFGTMHLFAPGEEFKHAPLAKLGYEPLDDTFTLGTFKQVIGSKKTKIKAVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+Y+ GIGN DE L++AKIHP ++A SL L I + + +A+ G S
Sbjct: 167 AYVVGIGNIYVDEALFRAKIHPERSANSLKDAELKRLYHAIVDTLSEAVNAGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + R+ KP A G + + GGR T Y P+ Q
Sbjct: 227 NGQGEMGMFQHSHQIYGRKDKPCHAC--GGPVHKMVVGGRGTHYCPKCQ 273
>gi|254852187|ref|ZP_05241535.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
R2-503]
gi|254931504|ref|ZP_05264863.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
HPB2262]
gi|255520154|ref|ZP_05387391.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-175]
gi|300764770|ref|ZP_07074760.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
N1-017]
gi|404281124|ref|YP_006682022.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2755]
gi|404286988|ref|YP_006693574.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|405749910|ref|YP_006673376.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes ATCC
19117]
gi|417317669|ref|ZP_12104281.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeria monocytogenes J1-220]
gi|424823326|ref|ZP_18248339.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str.
Scott A]
gi|258605492|gb|EEW18100.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
R2-503]
gi|293583056|gb|EFF95088.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
HPB2262]
gi|300514446|gb|EFK41503.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
N1-017]
gi|328474917|gb|EGF45717.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeria monocytogenes J1-220]
gi|332312006|gb|EGJ25101.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str.
Scott A]
gi|404219110|emb|CBY70474.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes ATCC
19117]
gi|404227759|emb|CBY49164.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
SLCC2755]
gi|404245917|emb|CBY04142.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 7 str. SLCC2482]
Length = 273
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 130/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|261341756|ref|ZP_05969614.1| hypothetical protein ENTCAN_08235 [Enterobacter cancerogenus ATCC
35316]
gi|288316124|gb|EFC55062.1| DNA-formamidopyrimidine glycosylase [Enterobacter cancerogenus ATCC
35316]
Length = 269
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K ++S R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRL---RWPVSDEIHALSDKPVISVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHSALAHLGPEPLSEAFNADYLRAKCAKKKAPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCR--VCGTPIIATKHAQRATFYCRQCQK 269
>gi|46446526|ref|YP_007891.1| formamidopyrimidine-DNA glycosidase [Candidatus Protochlamydia
amoebophila UWE25]
gi|81697648|sp|Q6MCT3.3|FPG_PARUW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|46400167|emb|CAF23616.1| putative formamidopyrimidine-DNA glycosidase [Candidatus
Protochlamydia amoebophila UWE25]
Length = 276
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 17/229 (7%)
Query: 1 MPELPEVEAARRAIEE-HCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEV + +++ IGKKI+ + I K + + F V G++I + R+G
Sbjct: 1 MPELPEVHTIVQDLKQSRLIGKKIISTEIFWP-KTLAVPTPEIFCQQVQGQSIQNVDRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + +L + F MTG R + S Y + ++G +
Sbjct: 60 KYIIFQLSNQMFLIVHLRMTG-------------RFQFVTSQTPASPYVRIQFNFENGDQ 106
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F D R+F + L++D + I LGP+ LL T + F D + +K +K+LLLDQS
Sbjct: 107 LRFHDTRKFGRWYLVSDVEEI--IGHLGPEPLLSSFTFELFEDMMKNRKTLLKSLLLDQS 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+I G+GN DE L++AK+HPL A ++ + L IK V+EK ++
Sbjct: 165 FIVGLGNIYVDEALWEAKLHPLIPANQINLKHLKILYHSIKYVLEKGIQ 213
>gi|386743528|ref|YP_006216707.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia stuartii MRSN 2154]
gi|384480221|gb|AFH94016.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia stuartii MRSN 2154]
Length = 269
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 36/291 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +I+ + S+ S+ + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNSIQYAIVRNSRL---RWPVSEQIKSLSDEMILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + + GM+G++ R +++ E K+ + L DG L
Sbjct: 58 YLLIELKNG-WIIIHLGMSGSL-----------RILLEELPE--EKHDHVDLVLKDGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF +D + +S LGP+ L + + K+KI IK L+D
Sbjct: 104 RYTDPRRFGAWLWCDDLETSRVLSHLGPEPLSDEFNAQYLFEQAGKRKIAIKPWLMDNKV 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+ G+GN A+E L+ A I P + +L+ E L++ IK+V+++++E G + +
Sbjct: 164 VVGVGNIYANEALFAAGISPEKITHTLTLEQSIDLVQQIKKVLQRSIEQGGTTLK----- 218
Query: 241 IFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F + KPG + FV GKK I I G R+T Y P+ QK
Sbjct: 219 DFLQSDGKPGYFAQELFVYGKKGEPCLICGTPILSIKQGQRSTFYCPQCQK 269
>gi|344199036|ref|YP_004783362.1| DNA-binding DNA glycosylase/AP lyase, H2TH [Acidithiobacillus
ferrivorans SS3]
gi|343774480|gb|AEM47036.1| DNA-binding DNA glycosylase/AP lyase, H2TH [Acidithiobacillus
ferrivorans SS3]
Length = 267
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 145/282 (51%), Gaps = 22/282 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
M ELPE+E R+ + + K++ ++ A + DG D A++ GKAI HR
Sbjct: 1 MAELPEIELLRQKLRRSILHKRVGVMQMQNAKGEPLTDGAGMDD--AALQGKAITDLHRY 58
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRS-AVKDTDEWPSKYSKFFVELDDG 117
G+ L+L LD + Q G G + +R A + E P + ++++
Sbjct: 59 GQYLFLELDRKDILAMQLG--------GELSGELERGPAQAEGGEEPR--AALEIQINGQ 108
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALL---EPMTVDEFTDSLSKKKITIKAL 174
L F + ++RLL++ + V +++LGPD L+ E + V ++LS+++ ++ +
Sbjct: 109 QRLRFQGTQLGNRLRLLDENSDVDFLTKLGPDPLMVHGEGLGV--LREALSRRRSALRNI 166
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLD ++ GIG ADE+L+QA++ P +TA SLS+E L+ I +V+++A+ A ++
Sbjct: 167 LLDDTFAPGIGGIWADEILFQARLRPDRTATSLSEEDRERFLEQIPKVLDRAVRCQAKTN 226
Query: 235 QFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
P ++ +R + G G ++ + GG++ + P Q
Sbjct: 227 LLPKTFL--TRHRADGHCPSCGGALETLAVGGKSALFCPACQ 266
>gi|159045909|ref|YP_001534703.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12]
gi|189044587|sp|A8LNK8.1|FPG_DINSH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|157913669|gb|ABV95102.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12]
Length = 284
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G++I+++ I + + ++ + + GK IL R+ K
Sbjct: 1 MPELPEVETVRRGLEPVMTGQRIIEADIRRPD--LRWPLPANMQTRLEGKRILRLARRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GM+G I I G A+ + K+ ++ D G +
Sbjct: 59 YILAELDSGETLIIHLGMSGRILIHGGQAPGAFHHALPSLE----KHDHVVLDFDTGARV 114
Query: 121 SFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
F D RRF + L + T + P ++ LGP+ L T L + IK+ LLD
Sbjct: 115 VFNDARRFGAMDLC-ETTEIDQHPMLATLGPEPLGNAFHEAYLTTRLKGRMTPIKSALLD 173
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG------- 230
Q ++G+GN E L+QA I PL+ A +S+ A+L+ I+ V+ A+E G
Sbjct: 174 QKVVAGLGNIYVCEALFQAGISPLRKAGRVSETRIASLVPIIRTVLGDAIEAGGSSLRDY 233
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D F + + RE P + + GR++ Y P Q+
Sbjct: 234 RQTDGDLGYFQHRFRVYDRENAPCVTAGCPDVVRRVVQSGRSSFYCPSCQR 284
>gi|306829344|ref|ZP_07462534.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis ATCC 6249]
gi|304428430|gb|EFM31520.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis ATCC 6249]
Length = 274
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 139/289 (48%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVDIRYPKMIK-TDLEEFQKELAGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + +D+ P K++ F +DG
Sbjct: 59 YLLYYLTDKVLIS-HLRMEGKYFYY--------------SDQVPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQSFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 272
>gi|336114637|ref|YP_004569404.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 2-6]
gi|335368067|gb|AEH54018.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 2-6]
Length = 277
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+ I + V ++ F ++ G+ I S R+GK
Sbjct: 1 MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLNTEAFADALAGETIRSLGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D + + + ++G R V +E K++ G EL
Sbjct: 61 FLIFYTD-------HYALVSHLRMEG-------RYRVYGQNEPVEKHTHMIFHFQSGKEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + S P+S+LGP+ L + T L K + +K+ LLDQ
Sbjct: 107 RYKDVRKFGTMHLFLKGEELSSLPLSKLGPEPLSDAFTEKYLYGKLKKTERNVKSCLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ ISG+GN DE L++A+I P + A SL+K+ L I + +++A+E G +
Sbjct: 167 TVISGLGNIYVDEALFRARIFPERKAKSLTKKDVHLLHSEIIQTLQEAVEKGGSTVRSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + G I+ + GR T Y P QK
Sbjct: 227 NSQGQMGMFQLELYVYGRKGEPCRK--CGTPIEKMVTAGRGTHYCPNCQK 274
>gi|389573842|ref|ZP_10163913.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. M 2-6]
gi|388426412|gb|EIL84226.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. M 2-6]
Length = 297
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ GK I I N + +F ++G+ I + R+GK
Sbjct: 21 MPELPEVETVRRTLQRLVKGKTIETVDIKWPNIIKRPGEPEEFARRMVGETIQTIERRGK 80
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + V +T E K+ DG EL
Sbjct: 81 FLLFHLD-------HYVMVSHLRMEG-------KYRVHETGEPYDKHVHVVFTFTDGTEL 126
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LG + + T D + L K +K LLDQ
Sbjct: 127 RYHDVRKFGTMHLFQPGEEKKELPLSQLGYEPFSDSFTPDYLWEQLKKTSRVVKTALLDQ 186
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
+ G+GN DEVL+++ IHP A LS SC L K I + ++ A++ G
Sbjct: 187 KIVVGLGNIYVDEVLFKSGIHPETKANQLSLASCKVLHKHIIDTLQVAVDAGGSTIRSYI 246
Query: 231 ---ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D F + + R +P + G I+ GGR T + QK
Sbjct: 247 NSQGDIGTFQLQLLVYDRRGEPCQTC--GSIIEKTVVGGRGTHFCVTCQK 294
>gi|381211870|ref|ZP_09918941.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lentibacillus sp. Grbi]
Length = 276
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 29/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + ++ I K I+ + N + F+ ++ ++I HR+GK
Sbjct: 1 MPELPEVETIKNTLKRFVIDKTIIDVSVFWPNIIKQPDDIDHFKHLLMKQSIKDIHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD S M G + +V + E K++ + DG EL
Sbjct: 61 FLLFELDDAVLVS-HLRMEG-------------KYSVHPSGEPVKKHTHVIFKFSDGEEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L D + P+++LGPD E T+D F L K IK++LLDQ
Sbjct: 107 RYNDVRKFGTMHLFKKGDERNNKPLNQLGPDPFDEAFTLDYFYQKLKKTDRAIKSVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ ++G+GN DE L++A IHPL A L K + + +++A+ G +
Sbjct: 167 AIVAGLGNIYVDETLFKANIHPLSKANKLKKREVKVIWEAAIYTLKEAVAQGGTTIRSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
F + + +P K GK I + GGR T QK+
Sbjct: 227 NSQGVMGMFQQELFVYGQANEPCKTC--GKPIVKMKIGGRGTHVCVSCQKM 275
>gi|284008829|emb|CBA75606.1| formamidopyrimidine-DNA glycosylase [Arsenophonus nasoniae]
Length = 269
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 136/291 (46%), Gaps = 36/291 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE + +G KI SI+ N + A++ + +++LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPYLVGNKIQYSIV--RNSQLRWPVATEI-LHIANESVLSVKRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++L + GM+G+I I ++ K+ + L DG L
Sbjct: 58 YLLIQLQHG-WIIIHLGMSGSIRILA-------------KEQLAEKHDHIDLVLADGKTL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF ND + P + LGP+ L D KK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTNDLDNCPVLFHLGPEPLSTDFNADYLYQRAKNKKTAIKPWLMDNKI 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+ G+GN A+E L+ AKI P + A SL+++ L+ IK++++ +++ G + +
Sbjct: 164 VVGVGNIYANEALFAAKILPTRAAHSLTRKEIDNLVIQIKQILQCSIKQGGITLK----- 218
Query: 241 IFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F + KPG + FV GKK I+ I G R+T + QK
Sbjct: 219 DFLQSDGKPGYFAQQLFVYGKKGEACSHCGQLIESIKLGQRSTFFCYNCQK 269
>gi|282854596|ref|ZP_06263931.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139]
gi|386069697|ref|YP_005984593.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes ATCC 11828]
gi|422390077|ref|ZP_16470173.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL103PA1]
gi|422458757|ref|ZP_16535408.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA2]
gi|422463028|ref|ZP_16539647.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL060PA1]
gi|422467305|ref|ZP_16543859.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA4]
gi|422469382|ref|ZP_16545907.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA3]
gi|422565431|ref|ZP_16641080.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL082PA2]
gi|282582178|gb|EFB87560.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139]
gi|314966092|gb|EFT10191.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL082PA2]
gi|314981863|gb|EFT25956.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA3]
gi|315090789|gb|EFT62765.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA4]
gi|315094942|gb|EFT66918.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL060PA1]
gi|315104263|gb|EFT76239.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA2]
gi|327328031|gb|EGE69800.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL103PA1]
gi|353454064|gb|AER04583.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes ATCC 11828]
Length = 280
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 33/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVS-ASDFEASVLGKAILSAH 56
MPELPEVE R +E H + +V S+ D + + G+ A+ FE ++ G+ + +
Sbjct: 1 MPELPEVETVRAGLE-HFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVN 59
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+GK LW LD GM+G + Q++ +++ + LDD
Sbjct: 60 RRGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR-------------HTRIVITLDD 106
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G +L F D+R F + L +P P++ + PD E VDE L ++ IK L
Sbjct: 107 GRDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
LDQ+ +SGIGN ADE L++ + HP LS+ LL+ ++V+ +A+ G S
Sbjct: 167 LDQTLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAVELLQTARDVMAEAMSQGGTSFD 226
Query: 234 SQF-----PSNWIF-----HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
S + S W F + RE +P G I + R++ P Q+L
Sbjct: 227 SLYVNVNGESGWFFRVVDAYGREDEPCHRC--GMPIVRESFMNRSSFRCPRCQRL 279
>gi|429085551|ref|ZP_19148522.1| Formamidopyrimidine-DNA glycosylase [Cronobacter condimenti 1330]
gi|426545377|emb|CCJ74563.1| Formamidopyrimidine-DNA glycosylase [Cronobacter condimenti 1330]
Length = 269
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 131/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D D KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGDYLHDKCVKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A E L+ A IHP + A SLSK+ C L + IK V+ +++E G + +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKKECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P + V G I R T + QK
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCR--VCGTPIQAGKHAQRRTYWCRRCQK 269
>gi|423116944|ref|ZP_17104635.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5245]
gi|376376813|gb|EHS89588.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca 10-5245]
Length = 269
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I + + P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SGDLPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|227520125|ref|ZP_03950174.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104]
gi|424676418|ref|ZP_18113291.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV103]
gi|424679375|ref|ZP_18116200.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV116]
gi|424682426|ref|ZP_18119197.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV129]
gi|424686083|ref|ZP_18122754.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV25]
gi|424689281|ref|ZP_18125867.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV31]
gi|424692793|ref|ZP_18129269.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV37]
gi|424697103|ref|ZP_18133439.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV41]
gi|424699382|ref|ZP_18135602.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV62]
gi|424703822|ref|ZP_18139946.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV63]
gi|424705989|ref|ZP_18142003.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV65]
gi|424716174|ref|ZP_18145488.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV68]
gi|424719115|ref|ZP_18148337.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV72]
gi|424722541|ref|ZP_18151591.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV73]
gi|424726297|ref|ZP_18154965.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV81]
gi|424734500|ref|ZP_18163012.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV85]
gi|424746551|ref|ZP_18174782.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV93]
gi|227072415|gb|EEI10378.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104]
gi|402356958|gb|EJU91676.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV103]
gi|402357071|gb|EJU91786.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV116]
gi|402367722|gb|EJV02060.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV129]
gi|402368027|gb|EJV02354.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV25]
gi|402369018|gb|EJV03316.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV31]
gi|402376340|gb|EJV10285.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV62]
gi|402376656|gb|EJV10590.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV41]
gi|402376863|gb|EJV10781.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV37]
gi|402383747|gb|EJV17330.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV63]
gi|402388519|gb|EJV21954.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV68]
gi|402388805|gb|EJV22231.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV65]
gi|402397069|gb|EJV30105.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV72]
gi|402399864|gb|EJV32719.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV81]
gi|402401871|gb|EJV34612.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV73]
gi|402407906|gb|EJV40404.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV85]
gi|402409278|gb|EJV41710.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis ERV93]
Length = 280
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTSEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPVEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>gi|225075626|ref|ZP_03718825.1| hypothetical protein NEIFLAOT_00642 [Neisseria flavescens
NRL30031/H210]
gi|224953048|gb|EEG34257.1| hypothetical protein NEIFLAOT_00642 [Neisseria flavescens
NRL30031/H210]
Length = 276
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GKKI K II + + + G+ +L+ +R+ K
Sbjct: 2 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFK--LRWPIHPNLAQILAGRKVLACNRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + ++ GM+G++ I +A + P K+ DDG L
Sbjct: 60 YLIITFETGIL-LIHLGMSGSLRI---------FTANDERIATPDKHDHLDFVFDDGTVL 109
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F V P+ E LGP+ L + + L +K +K L+D +
Sbjct: 110 RYHDPRKFGAVLWYEGIAEHHPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNA 169
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I PL+ A L+K+ CA L++ +K V+++A+E G
Sbjct: 170 VVVGVGNIYANESLFKAGISPLRPANKLTKKECALLVETVKAVLQRAIETGGSTLRDFVN 229
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G I T G R T Y P QK
Sbjct: 230 SDGKSGYFQQEYTVYGRHNEP--CVQCGGLIFKETLGQRGTFYCPNCQK 276
>gi|333397058|ref|ZP_08478871.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc gelidum KCTC 3527]
gi|406600445|ref|YP_006745791.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc gelidum JB7]
gi|406371980|gb|AFS40905.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Leuconostoc gelidum JB7]
Length = 275
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +G +I + + K+I+G S + F V + + R+GK
Sbjct: 1 MPELPEVETVRRGLEKLIVGGQI-RQVHLLYPKLINGDSQA-FITGVTNASFTAIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LRL + M G QY +V+ + P K+++ EL D ++
Sbjct: 59 YLLLRLSNGHTIVSHLRMEG----------QY---SVEPIETRPYKHTEIIFELLDQRQV 105
Query: 121 SFTDKRRFAKVRLLN---DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L N + VP +++LGP+ + + +D S+ K +K+ LLD
Sbjct: 106 FYNDTRRFGRMTLTNTHFEINDVPSLAKLGPEPTEKDLALDYMVAIFSRSKKPVKSFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---------- 227
Q+ I+GIGN ADEVL+Q+KIHP +L+ + L + I +++A+
Sbjct: 166 QNQIAGIGNIYADEVLWQSKIHPETPTKTLTVPELSLLRENIIAEMKRAIAHHGTTVHSF 225
Query: 228 -EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
V + QF + + R +P G + I G R T + P Q
Sbjct: 226 SNVFGEVGQFQNELQAYGRVGQP--CLRCGTTMVKIKVGQRGTTFCPVCQ 273
>gi|443673519|ref|ZP_21138581.1| DNA-formamidopyrimidine glycosylase [Rhodococcus sp. AW25M09]
gi|443413902|emb|CCQ16919.1| DNA-formamidopyrimidine glycosylase [Rhodococcus sp. AW25M09]
Length = 293
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 22/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVSASDFEASVLGKAILSAHRK 58
MPELPEVE R +E H +GK V+S+ + + + D + G+ + SA R+
Sbjct: 1 MPELPEVEVVRLGLESHVVGKT-VRSVEVLHPRAVRRHDLGGLDLIGQLRGQRVSSAQRR 59
Query: 59 GKNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK LWL ++ F + GM+G + ++ + DE K+ + LDDG
Sbjct: 60 GKYLWLVMEPGDFATVVHLGMSGQMLVQPPSAP----------DE---KHLRIRARLDDG 106
Query: 118 LELSFTDKRRFAKVRL----LNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIK 172
+L F D+R F L D T VP P++ + D + + + L K IK
Sbjct: 107 TDLRFVDQRTFGGWALAPIVTVDGTPVPEPVAHIARDPIDPLFDAESVVNVLRGKHTEIK 166
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LLDQ+ +SG+GN ADE L++AKIH + A +L++ + LL + V+ +AL G
Sbjct: 167 RALLDQTVLSGVGNIYADEALWRAKIHGNRIAETLTRPALRRLLTAVHAVMGEALAQGGT 226
Query: 233 S 233
S
Sbjct: 227 S 227
>gi|212712569|ref|ZP_03320697.1| hypothetical protein PROVALCAL_03664 [Providencia alcalifaciens DSM
30120]
gi|212684785|gb|EEB44313.1| hypothetical protein PROVALCAL_03664 [Providencia alcalifaciens DSM
30120]
Length = 269
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 38/291 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +I+ ++ S+ + + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAIVRNERL---RWPVSEQIKRLSDETVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L + GM+G++ I T+E P K+ + L DG
Sbjct: 58 YLLIELRKG-WIIVHLGMSGSVRIL--------------TEELPEEKHDHVDLILGDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF D S ++ LGP+ L + D +K+K+ +K L+D
Sbjct: 103 LRYTDPRRFGAWLWCEDLASSSVLAHLGPEPLSDEFNPQYLFDLAAKRKVAVKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ G+GN A+E L+ +KI P + +L+ L+ IK+V+++++E G + +
Sbjct: 163 VVVGVGNIYANEALFASKISPEKLTNTLTLHEITELVTQIKKVLQRSIEQGGTTLK---- 218
Query: 240 WIFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQ 276
F + KPG + FV GKK I+ I G RTT Y P+ Q
Sbjct: 219 -DFLQSDGKPGYFAQELFVYGKKGEPCSLCGTPIESIKQGQRTTFYCPQCQ 268
>gi|297202625|ref|ZP_06920022.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC
29083]
gi|197713200|gb|EDY57234.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC
29083]
Length = 286
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 122/238 (51%), Gaps = 17/238 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + ++ + V ++ A DF + G + + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGAEDFAHRLEGHRVGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + ++ A K ++ +F E+D
Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHAAPDEKHLRIR---------VRFADEVDT-- 109
Query: 119 ELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKALL 175
EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK L
Sbjct: 110 ELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPLFDDEAFHQALRRKRSTIKRAL 168
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LDQS ISG+GN ADE L++++IH + ++ A LL +++V+ AL VG S
Sbjct: 169 LDQSLISGVGNIYADEALWRSRIHYERPTAGFTRPRTAELLGHVRDVMNAALAVGGTS 226
>gi|422548524|ref|ZP_16624336.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA1]
gi|314919237|gb|EFS83068.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA1]
Length = 256
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL--------- 227
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V+ +A+
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTSFDS 227
Query: 228 ---EVGADSSQFPSNWIFHSREKKP 249
V +S FP + RE +P
Sbjct: 228 LYVNVNGESGWFPRVLDAYGRENEP 252
>gi|373857546|ref|ZP_09600287.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. 1NLA3E]
gi|372452678|gb|EHP26148.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. 1NLA3E]
Length = 275
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 29/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R +E + K+I + V F+ ++ G+ I R+GK
Sbjct: 1 MPELPEVETVKRTLEALVLQKEINSVSVFWPKIVKRPDEVVQFQDALKGQKIQKMGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L F + + + + ++G + V T+ K++ DG EL
Sbjct: 61 FLI-------FYTEDYALVSHLRMEG-------KYGVFSTEAPVEKHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + T PP+S LGP+ E TV T+ L++ IK LLDQ
Sbjct: 107 RYKDIRKFGTMHLFSKGTEFEQPPLSLLGPEPFSEKFTVQYLTEILARTNRKIKVTLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ + G+GN DE L+++KIHP + A SLS E L + I + +A+ G +
Sbjct: 167 ATVVGLGNIYVDETLFRSKIHPERQAASLSSEEITALHQEIVATLTEAVTKGGSTIRSYL 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
F + ++ +P + G ++ I GGR T + P Q+L
Sbjct: 227 NSQGQIGMFQLQLFVYGKKDEPCQR--CGTELQKIKVGGRGTHFCPSCQRL 275
>gi|189425027|ref|YP_001952204.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ]
gi|189421286|gb|ACD95684.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ]
Length = 271
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 1 MPELPEVEAARRAIEEH---CIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE+ + + IG+ +V+ + N VIDG AS +V G +R
Sbjct: 1 MPELPEVESVLQCLTTSNPSLIGR-LVREVRILRNSVIDG-EASAVVQTVTGSTCCDVYR 58
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSA----VKDTDEWPSKYSKFFVE 113
GK L+ FG G K V + + R + E ++++F +
Sbjct: 59 HGKYLF------------FGFQGHSASKRVWLALHLRMTGRLFLVPEQEIAERHTRFALL 106
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LD GL L F D R F +V L++DP+ V S+LGPDALL + F D L + +K
Sbjct: 107 LDHGLALRFDDPRAFGRVWLVDDPSEV--TSKLGPDALL--IQQKTFLDRLHGARRQLKP 162
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-GAD 232
LLLDQ +++G+GN ADE L++A++HP + + L+ + V+ +A+ GA+
Sbjct: 163 LLLDQGFVAGVGNIYADETLFRAQLHPARLSADLTSSEAERFYHALHGVLVQAVAAKGAN 222
Query: 233 ------SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ FP + R +P V G I G R T + P Q
Sbjct: 223 IDGVFEAGSFPVA--VYGRGGRP--CIVCGTLIVKERLGQRGTHFCPVCQ 268
>gi|418048327|ref|ZP_12686415.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium rhodesiae JS60]
gi|353193997|gb|EHB59501.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium rhodesiae JS60]
Length = 288
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V A+D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVAGKTITAVRVHHPRAVRRHEAGAADLTARLLDAQITGTDRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D GM+G + + + T + R A LDDG
Sbjct: 61 KYLWLNLSDDETALVVHLGMSGQMLLGEIPNTNHLRIATL---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F +L + D + VP P++ + D L + L +K IK
Sbjct: 106 TLSFVDQRTFGGWQLADLVEVDGSRVPEPVAHIARDPLDPLFDREAVVTVLRRKHSEIKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SG+GN ADE L++ KI+ + A +L++ LL EV+ +AL G
Sbjct: 166 QLLDQTVVSGVGNIYADESLWRVKINGARLAANLTRRQLGELLDAATEVMREAL--GQGG 223
Query: 234 SQFPSNWI 241
+ F S ++
Sbjct: 224 TSFDSLYV 231
>gi|54026154|ref|YP_120396.1| formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152]
gi|81679878|sp|Q5YS09.3|FPG_NOCFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|54017662|dbj|BAD59032.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica
IFM 10152]
Length = 294
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 28/248 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + I V ++ S D A + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVAGRVVGAVTITHPRSVRRHLAGSADLAARMTGRRVRAAQRRG 60
Query: 60 KNLWLRLDSPPFPS---------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
K LWL D P GM+G + ++ A K + ++
Sbjct: 61 KYLWLTFDEPGAADETALDAALVVHLGMSGQMLVQPAAAPVEKHAHIRAA---------- 110
Query: 111 FVELDDGLELSFTDKRRFAKVRLL----NDPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
LDDG EL F D+R F L D + VP P++ + D L + ++
Sbjct: 111 ---LDDGSELRFVDQRTFGGWALAPLAEVDGSLVPEPVAHIARDPLDPRFDAESVVAAIR 167
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
K IK +LLDQ+ +SGIGN ADE L++A I+ + A L++ + LL ++ V+ +
Sbjct: 168 AKNSEIKRVLLDQTVVSGIGNIYADESLWRAGINGNRLASGLTRPAVRRLLAEVRAVMLE 227
Query: 226 ALEVGADS 233
AL G S
Sbjct: 228 ALAAGGTS 235
>gi|336117264|ref|YP_004572031.1| formamidopyrimidine-DNA glycosylase/AP lyase [Microlunatus
phosphovorus NM-1]
gi|334685043|dbj|BAK34628.1| formamidopyrimidine-DNA glycosylase/AP lyase [Microlunatus
phosphovorus NM-1]
Length = 282
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 33/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE+ RR + G+ I + + + + DF A + G+ R+G
Sbjct: 1 MPELPEVESVRRGLAGGLTGRTIAQVTVLHPRPLRRHLPGPDDFVAQLAGRTFTEPRRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG-- 117
K LWL GM+G Q++ A D + ++ V+ DG
Sbjct: 61 KYLWLPFADGDALLAHLGMSG----------QFRFHA---ADAPLQRNTRVLVDFTDGAD 107
Query: 118 --LELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L+L F D+R F + L +PP I+ + D L +D L +K+ IK
Sbjct: 108 GGLQLRFVDQRMFGGLSLSEGGAELPPEIAHIARDPLDPEYDLDAVVARLRRKRTGIKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG---- 230
LLDQ ISGIGN ADE L+QA++H + ++S+ + +L +V+ +AL VG
Sbjct: 168 LLDQQLISGIGNIYADEALWQARMHYARATDTMSRRAAVNVLTAAAQVMTEALAVGGTSF 227
Query: 231 --------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
DS F + + RE +P G+ I R++ + P Q+
Sbjct: 228 DALYVNVNGDSGYFDRSLHAYGREGEPCDRC--GRPIKREAFMNRSSYFCPSCQR 280
>gi|345011428|ref|YP_004813782.1| formamidopyrimidine-DNA glycosylase catalytic domain-containing
protein [Streptomyces violaceusniger Tu 4113]
gi|344037777|gb|AEM83502.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein
[Streptomyces violaceusniger Tu 4113]
Length = 262
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 24/283 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + G ++ + +AD V+ GV+A + + G+ + R GK
Sbjct: 1 MPELPDVEGFRRTLASCAQGHRVERVEVADAG-VLHGVTAQRLKRDLEGRRFAAPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D P FGMTG R A E ++ + +LDDG L
Sbjct: 60 WLIAPTDGPTV-VVHFGMTG-------------RLACGAESEPAGRFERVAFDLDDGHRL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D+R+ + L V I + GPDAL ++ + L+ ++ +KA L DQ+
Sbjct: 106 GYEDQRKLQGIWLAATEADVDRILGDQGPDAL--SLSRADLDRLLAGRRGRVKATLTDQA 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS- 238
I+G+GN + DE+L++A+IHP + A +L+ + L ++EV+ ++ G + P
Sbjct: 164 VIAGLGNLLGDEILWRARIHPQRPANALTDDEHERLHTAMREVLRASVRAG----RVPDD 219
Query: 239 -NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
+W+ R+ G + GRT+ + P Q+ G
Sbjct: 220 PDWLTGQRDDPDPHCPRCGHPLRRGRIAGRTSLWCPHCQRDGG 262
>gi|126730152|ref|ZP_01745964.1| formamidopyrimidine-DNA glycosylase [Sagittula stellata E-37]
gi|126709532|gb|EBA08586.1| formamidopyrimidine-DNA glycosylase [Sagittula stellata E-37]
Length = 283
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 20/290 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + + + + + G +L R+ K
Sbjct: 1 MPELPEVETVRRGLAPVMEGQVIAHAQVNRPD--LRWPFPERMAQRLTGAHVLQLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L + GM+G + + G + Q+ V D P K+ ++D+G +
Sbjct: 59 YILADLSTDETLLIHLGMSGRMLVSGDPLGQF----VHD-HPMPEKHDHVVFDMDNGARV 113
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L++ + P ++ +GP+ L T + L + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMDLMSTRAVDAHPLLARIGPEPLGNAFTESHLVERLKGRNTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN E L+++ IHP + V +S +TL+ +++V+E A+ G S +
Sbjct: 174 KIVAGLGNIYVCEALFRSGIHPARRCVRISAARISTLVPIVRDVLEDAIAAGGSSLRDFR 233
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE P KA I I GR++ + P+ Q+
Sbjct: 234 QADGELGYFQHSFDVYGREGAPCKAPGCTGTIHRIVQSGRSSFFCPKCQR 283
>gi|255263904|ref|ZP_05343246.1| formamidopyrimidine-DNA glycosylase [Thalassiobium sp. R2A62]
gi|255106239|gb|EET48913.1| formamidopyrimidine-DNA glycosylase [Thalassiobium sp. R2A62]
Length = 283
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 130/295 (44%), Gaps = 30/295 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G++I ++ + + + + + GK I R+ K
Sbjct: 1 MPELPEVETVRRGLIPAMEGRRIFRADVRRPD--LRWPFPKNMADRLTGKTIERLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKG--VAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
+ L S GM+G + I G + V + A P K+ +++ G
Sbjct: 59 YVLADLSSGETLIIHLGMSGRMLISGDQLGVFHSEHPA-------PEKHDHVVFDMEGGA 111
Query: 119 ELSFTDKRRFAKVRL-----LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
++F D RRF + L L D + PI GP+ L D L K IK+
Sbjct: 112 RVTFNDARRFGAMDLAETATLEDHWLIKPI---GPEPLGNQFDAAYLVDRLKTKNSPIKS 168
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+LLDQ ++G+GN EVL++A IHP + A LSK +L+ I++V+ +A++ G S
Sbjct: 169 VLLDQRIVAGLGNIYVCEVLFRAGIHPARKAAKLSKARIESLVPIIRDVLSEAIDAGGSS 228
Query: 234 -----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + +E P A G I I GR++ Y P Q+
Sbjct: 229 LKDYRQADGELGYFQHTFRVYDQEGNPCSAVGCGSTIKRIVQSGRSSFYCPTCQR 283
>gi|345861586|ref|ZP_08813842.1| formamidopyrimidine-DNA glycosylase [Desulfosporosinus sp. OT]
gi|344325286|gb|EGW36808.1| formamidopyrimidine-DNA glycosylase [Desulfosporosinus sp. OT]
Length = 273
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H KI K I + G FE V G+ I + R+GK
Sbjct: 1 MPELPEVETIRRTLVKHVKDLKI-KEITLIWPSAVVGWEDKTFEGLVTGRRIQTIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD MTG + + + E P K++ L+ G EL
Sbjct: 60 YLLIMLDEDLTLIAHMRMTGRL------------NYFAEKKE-PEKHTHVVFRLEHG-EL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F+D R+F +++ + P + + +LGP+ L+E T + KKK+ +KA LLDQ
Sbjct: 106 HFSDTRKFGRIQAIPTPLCICKSSLQKLGPEPLVEGFTPAVLKERFGKKKVFLKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS--SQF 236
S ++G+GN DE L+ A + P + +LS E L I+K L+ G D+ + F
Sbjct: 166 SVLAGMGNIYVDESLFLAGLSPERRVDTLSDEEIVKL----HHAIQKVLQAGIDARGTSF 221
Query: 237 P-------SNWIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
+F + G+ +V G+ ++ I GRTT Y Q+
Sbjct: 222 RDYRDANGEKGLFEQALQVYGRGGEQCYVCGQTLERIRLAGRTTVYCSRCQR 273
>gi|46199756|ref|YP_005423.1| formamidopyrimidine-DNA glycosylase [Thermus thermophilus HB27]
gi|55981775|ref|YP_145072.1| formamidopyrimidine-DNA glycosylase [Thermus thermophilus HB8]
gi|7531119|sp|O50606.3|FPG_THET8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|81405496|sp|Q72HN2.3|FPG_THET2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|2897751|dbj|BAA24892.1| mutM [Thermus thermophilus HB8]
gi|46197383|gb|AAS81796.1| formamidopyrimidine-DNA glycosylase mutM [Thermus thermophilus
HB27]
gi|55773188|dbj|BAD71629.1| MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg) [Thermus
thermophilus HB8]
Length = 267
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ + + + D + + A G+ IL R+GK
Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQVVHRDPARYRNTALAE-------GRRILEVDRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ GMTG ++ T + R+A+ + +G L
Sbjct: 54 FLLFALEGGVELVAHLGMTGGFRLE---PTPHTRAAL----------------VLEGRTL 94
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF ++ + D +P + LGP+ L E F L + +KALLLDQ
Sbjct: 95 YFHDPRRFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQ 154
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+G+GN ADE L++A++ P + A SL++E L + ++EV+ +A+E+G +
Sbjct: 155 RLAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLYRALREVLAEAVELGGSTLSDQS 214
Query: 234 --------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + RE P A G+ ++ GR T + P Q
Sbjct: 215 YRQPDGLPGGFQTRHAVYGREGLPCPA--CGRPVERRVVAGRGTHFCPTCQ 263
>gi|326386384|ref|ZP_08208007.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Novosphingobium nitrogenifigens DSM 19370]
gi|326209045|gb|EGD59839.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Novosphingobium nitrogenifigens DSM 19370]
Length = 305
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 33/290 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + G+++ + ++ + + D ++ G +++ R+ K
Sbjct: 36 MPELPEVETTVRGLATVLAGERLTRVMVRRPD--LRRPFPPDLVQALTGARVVALGRRAK 93
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ D F GM+G I D E K+ +E G L
Sbjct: 94 YGLIQTDRGRTMVFHLGMSGRWRI--------------DPGEI-GKHDHLVLETARGRVL 138
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D RRF V L++ + P + LGP+ L +TV + + +K +LLDQ
Sbjct: 139 ALNDARRFGSVDLVDTAALDAFGPFAALGPEPLGPGLTVAHLAQAFDGRVAAVKLVLLDQ 198
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN E L++A+IHP + A ++S+ + + L+ I+ V+E+A+E G + +
Sbjct: 199 GVVAGLGNIYVCEALHRARIHPERAAGAVSRAALSRLVLEIRAVLEEAIEAGGSTLRDYA 258
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F W + RE KP G + I GGR+T + P QK
Sbjct: 259 RPDGELGYFAKEWRVYGREGKPCGC---GGTVRRIVQGGRSTFFCPRCQK 305
>gi|108805342|ref|YP_645279.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA
glycosylase [Rubrobacter xylanophilus DSM 9941]
gi|108766585|gb|ABG05467.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Rubrobacter xylanophilus DSM 9941]
Length = 286
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 23/285 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + + +G +I ++ + + +++ +F + G + A R+ K
Sbjct: 1 MPELPEVETIKNDLRGLVVGSRIERAEVREP-ALVEQPPQEEFVRRLGGARVTGARRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L + LD+ FQ + G + + V +E P + LD G L
Sbjct: 60 HLVVELDTGEALVFQLKIGGQLLL------------VPPVEE-PEDSVMLVLSLDGGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
D+ F++ RLL + +S LGP+ E TV + L ++ IK LLLDQS
Sbjct: 107 LLRDQTGFSRARLLGEKELAERLSGLGPEPFSEEFTVRYLKERLGSRRAQIKPLLLDQSL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGN ADE+LY A++ P + A SLS+E L I+ + +E + + +
Sbjct: 167 ISGIGNIYADEILYDARLSPRRRASSLSEEEWERLYAAIRSNLAAGIEHRGTTVRLYRDV 226
Query: 241 IF-------HSR--EKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ H R E+ G G ++ GGR T Y P Q
Sbjct: 227 LGRAGEHQNHLRVFERHGGPCPRCGAEVVRERVGGRPTHYCPRCQ 271
>gi|335052626|ref|ZP_08545504.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. 409-HC1]
gi|342211729|ref|ZP_08704454.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp.
CC003-HC2]
gi|422495154|ref|ZP_16571443.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL025PA1]
gi|313813553|gb|EFS51267.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL025PA1]
gi|333763092|gb|EGL40559.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. 409-HC1]
gi|340767273|gb|EGR89798.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp.
CC003-HC2]
Length = 280
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V+ +A+ G S
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTS 224
>gi|297191815|ref|ZP_06909213.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
pristinaespiralis ATCC 25486]
gi|297151083|gb|EFH30953.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
pristinaespiralis ATCC 25486]
Length = 286
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 19/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ G+ I + + + A DF A + G+ + A R+G
Sbjct: 1 MPELPEVEVVRRGLQSWVSGRTIADVQVLHPRAIRRHLPGAQDFAARLTGRTVGDARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL- 118
K LWL P + G + + G + Q + + DE K+ + + D L
Sbjct: 61 KYLWL-----PLADTDTSILGHLGMSGQLLVQPEHA----DDE---KHLRIRIRFTDPLA 108
Query: 119 -ELSFTDKRRFAKVRLL-NDPTSVPPI-SELGPDALLEPMTVDE-FTDSLSKKKITIKAL 174
EL F D+R F + L N P +P + + + D L +P+ D F +L ++ T+K
Sbjct: 109 TELRFVDQRTFGGLSLHENAPDGLPDVLAHIARDPL-DPLFDDAAFHTALRARRTTVKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++AK+H + +L++ LL+ ++EV+ AL VG +
Sbjct: 168 LLDQSLISGVGNIYADEALWRAKLHYERPTATLTRPRSVELLRHVREVMTAALAVGGTT 226
>gi|422409795|ref|ZP_16486756.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
F2-208]
gi|313608605|gb|EFR84469.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
F2-208]
Length = 273
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ DD EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFDDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVCPERAANSLSDKEIKHIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|365902908|ref|ZP_09440731.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus malefermentans KCTC 3548]
Length = 278
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 30/293 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + ++ S+ K++ S FE ++ GK I R+GK
Sbjct: 1 MPELPEVETVRRGLTN-LVKNAVINSVEVRYLKMVSPESPL-FEQALQGKTIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M + ++G Q + S V +K++ L DG EL
Sbjct: 59 YLLFRFND------HLTMVSHLRMEGKYDVQPEGSVV-------TKHTHVIFHLSDGREL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD R+F ++RL+N D + +P + +GP+ + + +D K TIK LLDQ
Sbjct: 106 RYTDTRKFGRMRLINTGDESVIPGLKAMGPEPTEKTLKLDYMKKIFRKSHRTIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
S I+G+GN DE L+ ++I+PLQ L E A L I + I A++
Sbjct: 166 SKIAGLGNIYVDETLWLSQINPLQQTDELPDEKIADLRDAIIDEIGIAIKGHGTTVHSFS 225
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
++ F ++ + ++ +P + G I+ I R T + P Q + G
Sbjct: 226 TAFGEAGNFQNHLHVYGKQGEPCERC--GTTIEKIKVAQRGTHFCPHCQPIIG 276
>gi|345297295|ref|YP_004826653.1| Formamidopyrimidine-DNA glycosylase [Enterobacter asburiae LF7a]
gi|345091232|gb|AEN62868.1| Formamidopyrimidine-DNA glycosylase [Enterobacter asburiae LF7a]
Length = 269
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 131/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHSVLAHLGPEPLSDAFNADYLKEKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSPQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCR--VCGTPIIATKHAQRATFYCRQCQK 269
>gi|294671315|ref|ZP_06736166.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306947|gb|EFE48190.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 273
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 28/289 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK IV++ + + D + ++ G+ +L R+ K
Sbjct: 1 MPELPEVETTLRGIAPHISGKTIVRTTVRQAK--LRHPVPPDLDDTLNGETVLRCTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L GM+G++ + + D K+ +E DG L
Sbjct: 59 YLLVHLPQGIL-LIHLGMSGSLRL-------FTSGNAPDA----GKHDHVEIEFSDGTLL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D RRF V P P+ + L P+ L T D ++L K++ IK++L+D
Sbjct: 107 RYHDPRRFGIVSWYPGPEETHPLLQNLAPEPLGNGFTADYLHNALKKRRSPIKSVLMDNK 166
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L+ A I P + A+ +S++ A L+ I+E + +A+E G
Sbjct: 167 TVVGVGNIYANESLFAAGIAPNRPAMQISRKEAAALVHHIRETLRRAIEKGGSTLRDFVD 226
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R+ +P G I+ G R T Y P Q
Sbjct: 227 SEGKSGYFQQEYKVYGRQGQP--CLQCGGGIEKTVIGQRGTFYCPNCQH 273
>gi|50842930|ref|YP_056157.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
KPA171202]
gi|335054136|ref|ZP_08546957.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. 434-HC2]
gi|387503829|ref|YP_005945058.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes 6609]
gi|422456220|ref|ZP_16532888.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL030PA1]
gi|50840532|gb|AAT83199.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
KPA171202]
gi|315106731|gb|EFT78707.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL030PA1]
gi|333765501|gb|EGL42850.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. 434-HC2]
gi|335277874|gb|AEH29779.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes 6609]
Length = 256
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 31/266 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVS-ASDFEASVLGKAILSAH 56
MPELPEVE R +E H + +V S+ D + + G+ A+ FE ++ G+ + +
Sbjct: 1 MPELPEVETVRAGLE-HFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVN 59
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+GK LW LD GM+G + Q++ +++ + LDD
Sbjct: 60 RRGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR-------------HTRIVITLDD 106
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G +L F D+R F + L +P P++ + PD E VDE L ++ IK L
Sbjct: 107 GRDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
LDQ+ +SGIGN ADE L++ + HP LS+ LL+ ++V+ +A+ G S
Sbjct: 167 LDQTLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAVELLQTARDVMAEAMSQGGTSFD 226
Query: 234 SQF-----PSNWIF-----HSREKKP 249
S + S W F + RE +P
Sbjct: 227 SLYVNVNGESGWFFRVVDAYGREDEP 252
>gi|255658137|ref|ZP_05403546.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM
20544]
gi|260849444|gb|EEX69451.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM
20544]
Length = 274
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++E G+ I + I + + F++ V GK + R+GK
Sbjct: 1 MPELPEVEIIRQYLDEQLPGRTIACADILLTRQ-LKYPEPEAFQSLVAGKRMKGMRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKD-TDEWPSKYSKFFVELDDGLE 119
L L L F MTG++ V D + Y++ L G
Sbjct: 60 YLLLDLQDGSTIVFHLRMTGSL--------------VYDPSGNQRDAYARMVFHLAGGGA 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D R F V + +V + LGP+ L E T ++ +K IK+ LLD
Sbjct: 106 LVFADVRTFGCVYGFAAGEEIAVSGLQSLGPEPLSEAFTPAYLAQAIRGRKQPIKSFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q I+G+GN ADE L+ A IHP + A SL++ C L I+ V+ L G + +
Sbjct: 166 QRRIAGLGNIYADESLFLAGIHPRREAGSLTQAECKKLAAAIQHVLRDGLADGGTTFRNY 225
Query: 238 SN------------WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
N ++H R KP G+ I+ IT GGR T + P Q
Sbjct: 226 RNGEGGYGRHQEHLCVYH-RAGKPCP--TCGRPIEKITVGGRGTHFCPYCQH 274
>gi|268593317|ref|ZP_06127538.1| DNA-formamidopyrimidine glycosylase [Providencia rettgeri DSM 1131]
gi|291311014|gb|EFE51467.1| DNA-formamidopyrimidine glycosylase [Providencia rettgeri DSM 1131]
Length = 269
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 38/292 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +++ + S+ S+ +A+LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAVVRNSRL---RWPVSEQIKSLSDEAVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L + + GM+G++ I T+E P K+ + + DG
Sbjct: 58 YLLIELQTG-WIIVHLGMSGSVRIL--------------TEELPEEKHDHVDLVMRDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF +D + ++ LGP+ L + + KKK+ +K L+D
Sbjct: 103 LRYTDPRRFGAWLWCDDLENSSVLAHLGPEPLSDAFNPQYLYELAQKKKVAVKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ G+GN A+E L+ KI P + +L+ L++ IK+V+++++E G + +
Sbjct: 163 VVVGVGNIYANEALFATKISPEKITNTLTLAEITELVQQIKKVLQRSIEQGGTTLK---- 218
Query: 240 WIFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F + KPG + FV GKK I+ I G R+T + P+ QK
Sbjct: 219 -DFLQSDGKPGYFAQELFVYGKKGEPCSMCGTPIESIKQGQRSTFFCPQCQK 269
>gi|365102456|ref|ZP_09332757.1| formamidopyrimidine-DNA glycosylase [Citrobacter freundii
4_7_47CFAA]
gi|363646184|gb|EHL85432.1| formamidopyrimidine-DNA glycosylase [Citrobacter freundii
4_7_47CFAA]
Length = 269
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLEL-ADGWIIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNANYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P +A G I RTT Y QK
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRAC--GAPIVATKHAQRTTFYCRRCQK 269
>gi|420368537|ref|ZP_14869285.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 1235-66]
gi|391322179|gb|EIQ78879.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 1235-66]
Length = 269
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 131/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATV-RNGRLRWPVSEEIYRLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLEL-ADGWIIIHLGMSGSLRIL--------------PEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNAAYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECGLLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P + V G I RTT Y QK
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR--VCGAPIVATKHAQRTTFYCRRCQK 269
>gi|289426426|ref|ZP_06428169.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187]
gi|365963145|ref|YP_004944711.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965385|ref|YP_004946950.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365974319|ref|YP_004955878.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn33]
gi|422427395|ref|ZP_16504311.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA1]
gi|422432640|ref|ZP_16509509.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL059PA2]
gi|422434194|ref|ZP_16511054.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL083PA2]
gi|422438645|ref|ZP_16515483.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL092PA1]
gi|422444314|ref|ZP_16521109.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA1]
gi|422446985|ref|ZP_16523723.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL027PA1]
gi|422451395|ref|ZP_16528098.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL030PA2]
gi|422453548|ref|ZP_16530244.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA3]
gi|422491912|ref|ZP_16568222.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL086PA1]
gi|422499380|ref|ZP_16575644.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL063PA2]
gi|422510008|ref|ZP_16586159.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL059PA1]
gi|422516859|ref|ZP_16592967.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA2]
gi|422522646|ref|ZP_16598667.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL053PA2]
gi|422530581|ref|ZP_16606540.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA1]
gi|422540323|ref|ZP_16616192.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL013PA1]
gi|422542318|ref|ZP_16618170.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA1]
gi|422544438|ref|ZP_16620276.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL082PA1]
gi|422547213|ref|ZP_16623035.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA3]
gi|422557217|ref|ZP_16632962.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL025PA2]
gi|422563846|ref|ZP_16639518.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL046PA1]
gi|422571261|ref|ZP_16646854.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL067PA1]
gi|422579506|ref|ZP_16655028.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA4]
gi|289153154|gb|EFD01872.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187]
gi|313763648|gb|EFS35012.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL013PA1]
gi|313794041|gb|EFS42065.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA1]
gi|313801429|gb|EFS42680.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL110PA2]
gi|313816826|gb|EFS54540.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL059PA1]
gi|313829555|gb|EFS67269.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL063PA2]
gi|313839851|gb|EFS77565.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL086PA1]
gi|314914650|gb|EFS78481.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA4]
gi|314920853|gb|EFS84684.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL050PA3]
gi|314930531|gb|EFS94362.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL067PA1]
gi|314954309|gb|EFS98715.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL027PA1]
gi|314957412|gb|EFT01515.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA1]
gi|314963604|gb|EFT07704.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL082PA1]
gi|314968564|gb|EFT12662.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL037PA1]
gi|315079458|gb|EFT51451.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL053PA2]
gi|315099275|gb|EFT71251.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL059PA2]
gi|315100491|gb|EFT72467.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL046PA1]
gi|315109075|gb|EFT81051.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL030PA2]
gi|327451939|gb|EGE98593.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL092PA1]
gi|327455026|gb|EGF01681.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA3]
gi|327457686|gb|EGF04341.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL083PA2]
gi|328755142|gb|EGF68758.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL087PA1]
gi|328758080|gb|EGF71696.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL025PA2]
gi|365739826|gb|AEW84028.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365742066|gb|AEW81760.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365744318|gb|AEW79515.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes TypeIA2 P.acn33]
Length = 256
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
MPELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V+ +A+ G S
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTS 224
>gi|256379956|ref|YP_003103616.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827]
gi|255924259|gb|ACU39770.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827]
Length = 291
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + + + + A+DF + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLHEHVTGRTVASVEVLHARAIRRHLPGAADFAVRLTGQRMDAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW+ L GM+G + ++ V K V+ E DDG E
Sbjct: 61 KYLWVDLSGGEAVLAHLGMSGQMLVQPVGAPDEKHLRVRVVFE------------DDGPE 108
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L D T +P +S + D + D +L +K +K
Sbjct: 109 LRFVDQRTFGGLALDELVEVDGTWLPRQVSHIARDPMDPEFDADAAVRALRSRKTDVKRA 168
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SG+GN ADE L++A++H L+ L+ A LL +V+ +AL G S
Sbjct: 169 LLDQTLVSGVGNIYADESLWRARLHGLRPTAKLTTAKTAELLGHATQVMLEALGQGGTS 227
>gi|419765188|ref|ZP_14291427.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397742316|gb|EJK89535.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 300
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 32 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 88
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 89 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 133
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 134 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 193
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK + +++E G +
Sbjct: 194 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLALLRSIEQGGTT 247
>gi|312109949|ref|YP_003988265.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1]
gi|336234371|ref|YP_004586987.1| formamidopyrimidine-DNA glycosylase [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718990|ref|ZP_17693172.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215050|gb|ADP73654.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1]
gi|335361226|gb|AEH46906.1| formamidopyrimidine-DNA glycosylase [Geobacillus
thermoglucosidasius C56-YS93]
gi|383367893|gb|EID45168.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 274
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 126/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK + + + + S+F ++ G+ I HR+GK
Sbjct: 1 MPELPEVETIRRTLIPLAAGKTVADVQVFWPRIIKHPANISEFIETIKGQTIRDIHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D S M G +Y S KD E P + F + DG EL
Sbjct: 61 FLKFIFDEHVLIS-HLRMEG----------RYAVSKKKDAIE-PHTHVIF--QFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + S P+S+LGP+ E T + L K TIKA LLDQ
Sbjct: 107 RYRDVRKFGTMHLYPKGEEDSRLPLSQLGPEPFSEEFTANFLAKRLRKTNRTIKAALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ + G GN DE L++A IHP + A SL+ E A L + + +++A+E G + +
Sbjct: 167 TVVVGFGNIYVDEALFRAGIHPERAASSLTDEEAACLHREMVATLQEAVEKGGSTVRSYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P K G I GR T Y Q
Sbjct: 227 NTQGEIGMFQLQLFVYGRKGEPCKR--CGNPIQKTVVAGRGTHYCAFCQH 274
>gi|417915223|ref|ZP_12558844.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis bv. 2 str.
SK95]
gi|342835337|gb|EGU69588.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis bv. 2 str.
SK95]
Length = 274
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI IA + +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIEIAYPKMI--KTDLDEFQKEVPGQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L + S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTNKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLTPDLLEAYFVSKKLGPEPSEQDFDLQVFQIALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + SL+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQSLTAEEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQECSRCGTLIEKFQLGGRGTHFCPQCQR 272
>gi|440696023|ref|ZP_20878526.1| DNA-formamidopyrimidine glycosylase [Streptomyces turgidiscabies
Car8]
gi|440281781|gb|ELP69326.1| DNA-formamidopyrimidine glycosylase [Streptomyces turgidiscabies
Car8]
Length = 286
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V V+ DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVARRTVADAEVLHPRAVRRHVAGPDDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + V+ D K+ + V D L
Sbjct: 61 KYLWLPLEDTGQSVLAHLGMSGQLL-------------VQPHDAADEKHLRIRVRFADDL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 ATELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPLFDDEAFHQALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L+++++H + V ++ A LL +++V+ AL VG S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRSRVHYERPTVGFTRPRTAELLGHVRDVMNAALAVGGTS 226
>gi|397623285|gb|EJK66943.1| hypothetical protein THAOC_12083, partial [Thalassiosira oceanica]
Length = 647
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 32/234 (13%)
Query: 71 FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAK 130
+ S FGMTG + + +K +P ++ V G E SF+D RRF
Sbjct: 356 YLSLHFGMTGRM---SSPDHMPELMELKKDSAYPPPHTHL-VFAQGGKEASFSDPRRFGS 411
Query: 131 VRL-------LNDPTSVPPISELGPDAL------LEPMTVD--------EFTDSLSKKKI 169
V + + D S+P +++ DAL L+ + D L +K
Sbjct: 412 VLIHAGPETGVIDEESIPTFADISKDALSASEEHLKSKSARPARECDDGSLVDKLMNRKK 471
Query: 170 TIKALLLDQ-SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
IK LLLDQ + +SG+GNWVADE+LY++KIHP Q L+K+ ++ + V+ +A+E
Sbjct: 472 GIKGLLLDQRAVVSGVGNWVADEILYRSKIHPDQAY--LTKDEAEGIVHEMHSVLSEAVE 529
Query: 229 VGADSSQFPSNWIFHSREKKPGKAFV----DGKKIDFITAGGRTTAYVPELQKL 278
+ FP W+FH R + G GK I F+ +GGR++A +P LQK+
Sbjct: 530 CLKRGNDFPKQWLFHYRWRLGGSGSTSKDHHGKTIHFVQSGGRSSAIIPSLQKV 583
>gi|408680984|ref|YP_006880811.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC
10712]
gi|328885313|emb|CCA58552.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC
10712]
Length = 286
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 17/238 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V +DF A + G+ A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVTEVEVLHPRAVRRHPAGGADFAARLTGQRFEVARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--G 117
K LWL P + G + + G + Q + +A DE K+ + + DD G
Sbjct: 61 KYLWL-----PLAESGTSVLGHLGMSGQLLVQPEGAA----DE---KHLRIRIRFDDSAG 108
Query: 118 LELSFTDKRRFAKVRLLND-PTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
EL F D+R F + L + P +P I + D L F +L ++ T+K L
Sbjct: 109 TELRFVDQRTFGGLSLHDQTPAGLPDVIGHIARDPLDPEFDDAAFQSALRLRRTTVKRAL 168
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LDQS ISG+GN ADE L+++++H + +L++ A LL I++V+ AL VG S
Sbjct: 169 LDQSLISGVGNIYADEALWRSRLHYDRPTATLTRPRSAELLGHIRDVMNAALAVGGTS 226
>gi|294631624|ref|ZP_06710184.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14]
gi|292834957|gb|EFF93306.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14]
Length = 289
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 119/246 (48%), Gaps = 39/246 (15%)
Query: 4 LPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKGKNL 62
+PEVE RR +E + + + + V ++ D F ++G + + R+GK L
Sbjct: 1 MPEVEVVRRGLERWVAQRTVAEVAVLHPRAVRRHLAGPDDFARRLIGHRVGTPSRRGKYL 60
Query: 63 WLRL-DSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
WL L DS GM+G + + + A ++ R V+ DE DG E
Sbjct: 61 WLPLADSDQAILAHLGMSGQLLVQPREAAAEKHLRIRVRFADE-------------DGTE 107
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-----------LEPMTVDE-FTDSLSKK 167
L F D+R F + L E GPD L L+P+ DE F +L +K
Sbjct: 108 LRFVDQRTFGGLSL----------HETGPDGLPDVIAHIARDPLDPLFDDEAFHRALRRK 157
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+ TIK LLDQS ISG+GN ADE L++A++H + +L++ A LL +++V+ +AL
Sbjct: 158 RTTIKRALLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRTAELLGHVRDVMNEAL 217
Query: 228 EVGADS 233
VG S
Sbjct: 218 AVGGTS 223
>gi|455645454|gb|EMF24514.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Citrobacter freundii GTC 09479]
Length = 269
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATV-RNGRLRWPVSEEIYRLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WVIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P +A G I RTT Y QK
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRAC--GAPIVATKHAQRTTFYCRRCQK 269
>gi|337745574|ref|YP_004639736.1| protein Mutprotein M [Paenibacillus mucilaginosus KNP414]
gi|336296763|gb|AEI39866.1| MutM [Paenibacillus mucilaginosus KNP414]
Length = 280
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 29/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + + + F+A + G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLNVLVAGKTIERVSVHLKRIIQHPDDIETFKALLEGETIQEVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D +F + + ++G R V D+ ++ DG EL
Sbjct: 61 FLRIHTD-------RFTVVSHLRMEG-------RYGVYKADDPLELHTHVVFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + P+ +LG + L E T + F ++ +K IK LLL+Q
Sbjct: 107 RYKDVRQFGTMHIYERGRDLEEKPLKKLGLEPLDEAFTFEAFRSRIAGRKTKIKPLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
YI GIGN DE L+ A IHP + A +L+K L + I + + A+E G S
Sbjct: 167 EYIVGIGNIYVDESLFLAGIHPEREADTLTKAEMIRLHQAIIQTLTDAVEAGGSSIKSFV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
F ++ + R+ +P G I+ GGR T P+ QK+
Sbjct: 227 NGQGEMGMFQHSFRVYGRKNEPCPNC--GHAIEKTVVGGRGTHTCPKCQKM 275
>gi|307700916|ref|ZP_07637941.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16]
gi|307613911|gb|EFN93155.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16]
Length = 306
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 125/314 (39%), Gaps = 69/314 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--------------SDFEAS 46
MPELPEVE RR + H + N + VSA S F
Sbjct: 5 MPELPEVETIRRNLSSHLL------------NTCVTAVSAPTHPRSLRFQPGGFSRFHEL 52
Query: 47 VLGKAILSAHRKGKNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS 105
++GK + S R+GK LWL L F GM+G + R A D P
Sbjct: 53 LVGKRLESVSRRGKFLWLELSGNQTAWCFHLGMSGQL-----------RLAAGDITALPH 101
Query: 106 KYSKFFVELDDGLELSFTDKRRFA--KVRLLNDPTSVPP-------------ISELGPDA 150
+ +F LD+GLEL F D+R F +VR L T P + + D
Sbjct: 102 ERLRF--TLDNGLELVFCDQRTFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDV 159
Query: 151 LLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKE 210
L + V L + IK LLDQ+ +SGIGN ADE L+ A +HP A +LS E
Sbjct: 160 LDPNLDVSWVVSRLRSSRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLARNLSGE 219
Query: 211 SCATLLKCIKEVIEKALEVGADS------------SQFPSNWIFHSREKKPGKAFVDGKK 258
LL+ V+ ALE G S F S + + R + G+
Sbjct: 220 DLRNLLEVAASVMRHALEFGGTSFDQLYVDSWGNPGDFASELLVYGRGGQACHQC--GQA 277
Query: 259 IDFITAGGRTTAYV 272
+D I GR T +
Sbjct: 278 LDKIVLDGRATVFC 291
>gi|239906333|ref|YP_002953074.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1]
gi|239796199|dbj|BAH75188.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1]
Length = 281
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 112/236 (47%), Gaps = 33/236 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RA+ +G+ IV + D KV+ G +DF A +G+ I S R+
Sbjct: 1 MPELPEVETIARALAPGLVGRVIV-GVDVPDAKVLAGPKRRADFAAMAVGRTIQSVGRRA 59
Query: 60 KNLWLRL--------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K L L L D P +F MTG +I D D ++
Sbjct: 60 KLLLLTLGPRPQVPGDGPAVLAFHLKMTGRFHIAP--------PGAPDPDR-----ARLL 106
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPI---SELGPDALLEP--MTVDEFTDSLSK 166
V L DG L F D RRF R+L P ++ + LGP EP MT F ++L +
Sbjct: 107 VRLSDGNTLVFADLRRFGTARVLT-PEALSAWDFHASLGP----EPWDMTPQAFEEALGR 161
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
K IKA LLDQ+ I+GIGN ADE L+ A+I P A L+ LLK ++ V
Sbjct: 162 KSTRIKAALLDQTVIAGIGNIYADESLFAARIRPDTPAKDLTPAQRQRLLKAVQNV 217
>gi|347534298|ref|YP_004840968.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504354|gb|AEN99036.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 283
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ R+ + + G KI KS+ K+I+ + A DFE + GK I+ R+GK
Sbjct: 4 MPELPEVQTVRQGLNKLVKGSKI-KSVEVLYPKMIN-IPAEDFEKKLAGKEIIQIDRRGK 61
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL M G K + E P K++ L DG EL
Sbjct: 62 YLLFRLSDDLTLVSHLRMEG------------KYEVQSEGTERP-KHTNVVFHLTDGREL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R F K+ L+ D + ++++GP+ + + D + + K IK LLDQ
Sbjct: 109 RYKDTRMFGKMALVKNEDVYKLSGLNKIGPEPTEQDLKFDYMKEIMHKSHRKIKGFLLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S I+G+GN DEVL+ +KI+P Q LS + L I + I A++ + S
Sbjct: 169 SKIAGLGNIYCDEVLWLSKINPEQLTNELSDDEIRRLRANIIKEIAAAIKDHGTTVHSYS 228
Query: 239 NWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
N H+ +K K G ++ I R T + P+ QKL+G
Sbjct: 229 NAYGEAGQFQNQLHAYGRKDEKCECCGTTMEKIKVAQRGTTFCPKCQKLHG 279
>gi|342164082|ref|YP_004768721.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus pseudopneumoniae IS7493]
gi|383937510|ref|ZP_09990766.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudopneumoniae
SK674]
gi|418969051|ref|ZP_13520209.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|341933964|gb|AEL10861.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus pseudopneumoniae IS7493]
gi|383352476|gb|EID30172.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715597|gb|EID71547.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudopneumoniae
SK674]
Length = 274
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSIEIRYPKMIK-TDLDEFQREVPGQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFCLTEKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|85374938|ref|YP_459000.1| formamidopyrimidine-DNA glycosylase [Erythrobacter litoralis
HTCC2594]
gi|122543790|sp|Q2N7Y8.1|FPG_ERYLH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|84788021|gb|ABC64203.1| formamidopyrimidine-DNA glycosylase [Erythrobacter litoralis
HTCC2594]
Length = 271
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPELPEVE R + G++I +++ + DG+ + + G ++S R
Sbjct: 1 MPELPEVETTVRGLARFLQGERITRTVTNRPDMRFPFPDGLGQA-----LTGATVVSLGR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K + D F GM+G I D DE K+ +E D
Sbjct: 56 RAKYGLIHTDRDQTMIFHLGMSGRWRI--------------DPDE-TDKHDHLLIETADH 100
Query: 118 LELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
+ D RRF V L+ P + +GP+ L + +T++ +LS +K IK L
Sbjct: 101 -RFALCDPRRFGWVDLVGTQALDQWPGFAAMGPEPLGDALTIEHLRAALSGRKQAIKLCL 159
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
LDQ+ ++G+GN E L+ A+IHP + +SK++ + L+ I++V+E+++ G S
Sbjct: 160 LDQAIVAGLGNIYVCEALWHARIHPRKAGGRVSKQALSLLITAIRDVLEQSIRDGGSSLR 219
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + + R+ +P DG I GGR+T Y P Q+
Sbjct: 220 DYAQPDGELGYFATRFQVYGRDGQPCHR-DDGGTIRRFAQGGRSTWYCPRCQR 271
>gi|52840799|ref|YP_094598.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378776503|ref|YP_005184936.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|81680527|sp|Q5ZY18.3|FPG_LEGPH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|52627910|gb|AAU26651.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507313|gb|AEW50837.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 274
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ I+ H G+ I + + N+ + + GK I + R+GK
Sbjct: 1 MPELPEVETTKQGIKPHLEGRMI--TAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L +D + GM+G + I V T P K+ + +++GL L
Sbjct: 59 YILLHMDKG-YLLIHLGMSGHLRI------------VSQTAN-PQKHDHVDLHINNGLAL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ +P P ++ LGP+ L + + + K +IK+ ++D
Sbjct: 105 RFCDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQ 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ GIGN A E L+ AKIHP +A ++ E +L IK+++E A+E G + +
Sbjct: 165 IVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLR---- 220
Query: 240 WIFHSREKKPGK--------------AFVDGKKIDFITAGGRTTAYVPELQKL 278
F+S + KPG V KI+ + GR +A+ P Q +
Sbjct: 221 -DFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPI 272
>gi|414583388|ref|ZP_11440528.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-1215]
gi|420881011|ref|ZP_15344378.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0304]
gi|420884698|ref|ZP_15348058.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0421]
gi|420891121|ref|ZP_15354468.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0422]
gi|420896292|ref|ZP_15359631.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0708]
gi|420902629|ref|ZP_15365960.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0817]
gi|420907624|ref|ZP_15370942.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-1212]
gi|420973083|ref|ZP_15436275.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0921]
gi|421050260|ref|ZP_15513254.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392078381|gb|EIU04208.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0422]
gi|392080461|gb|EIU06287.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0421]
gi|392085920|gb|EIU11745.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0304]
gi|392095604|gb|EIU21399.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0708]
gi|392099990|gb|EIU25784.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0817]
gi|392105528|gb|EIU31314.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-1212]
gi|392118540|gb|EIU44308.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-1215]
gi|392164634|gb|EIU90322.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus
5S-0921]
gi|392238863|gb|EIV64356.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense CCUG
48898]
Length = 286
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 46/303 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E V L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEVGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---- 227
K LLDQ+ +SG+GN ADE L++A++H + +S+ +L V+ AL
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWRARVHGRRLTDGMSRAKLTEVLDSAAAVMRLALAQGG 225
Query: 228 --------EVGADSSQFPSNWIFHSREKKP----GKAFVDGKKIDFITAGGRTTAYVPEL 275
V +S F + + RE +P G+A ++ F+ R++ + P
Sbjct: 226 TSFDDLYVNVNGESGYFDRSLEAYGREGEPCRRCGRAM---RREAFMN---RSSYFCPSC 279
Query: 276 QKL 278
Q+L
Sbjct: 280 QRL 282
>gi|377573012|ref|ZP_09802088.1| formamidopyrimidine-DNA glycosylase [Mobilicoccus pelagius NBRC
104925]
gi|377538286|dbj|GAB47253.1| formamidopyrimidine-DNA glycosylase [Mobilicoccus pelagius NBRC
104925]
Length = 299
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 27/246 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR I +H +G+ + V D A + G+ +L+A R+G
Sbjct: 1 MPELPEVEVVRRGIADHVVGRTFSHVALHGSRVARRHVPGPDDLAARLAGRTVLAADRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + ++ + P +++ F + D G +
Sbjct: 61 KYLWLALDGAEALVVHLGMSGQMLVED-----------PSAERRPHQHATFTFD-DAGTQ 108
Query: 120 LSFTDKRRF---AKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT------ 170
L F D+R F A V L+ DP + + P+++ + VD D + +
Sbjct: 109 LRFVDQRTFGGLALVDLVPDPRGGGYVHGI-PESVTH-IAVDPLEDVFDARAVARLMRAS 166
Query: 171 ---IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+K LLL Q +SGIGN ADE L++A++H + A +++ + LL +++V+ AL
Sbjct: 167 RSGVKRLLLHQGVVSGIGNIYADESLWRARLHGERPAAAVTGPAIERLLAHVQDVMRAAL 226
Query: 228 EVGADS 233
E G S
Sbjct: 227 EAGGTS 232
>gi|284992410|ref|YP_003410964.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM
43160]
gi|284065655|gb|ADB76593.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM
43160]
Length = 292
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 22/243 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V + A F A++ G+ + +AHR+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRSVASVEVHHPRAVRRHLEGAEHFVAALTGRTLTAAHRRG 60
Query: 60 KNLWLRL----DSPPFPSF--QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL L +P + GM+G + ++ K T + F
Sbjct: 61 KYLWLPLAEGDGTPAGQALVAHLGMSGQLLVE------------KPTQPDETHLRARFTF 108
Query: 114 LDDGLELSFTDKRRFAKVRL--LNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKIT 170
D G EL F D+R F + + + +VPP ++ + D L EF+ L +++
Sbjct: 109 TDGGRELRFVDQRTFGGLAVEDTGEGDTVPPRVAHIAIDPLDPAFDEAEFSTRLRRRRTE 168
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+K LLDQ+ I G+GN ADE L++A++H + L++ LL+ +++V+ ++L G
Sbjct: 169 VKRALLDQTLIGGVGNIYADESLWRARLHGNRPTDRLTRAQVGALLEGVRDVLHESLAQG 228
Query: 231 ADS 233
S
Sbjct: 229 GTS 231
>gi|397679994|ref|YP_006521529.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense str.
GO 06]
gi|418247599|ref|ZP_12873985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus 47J26]
gi|420932370|ref|ZP_15395645.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-151-0930]
gi|420942629|ref|ZP_15405885.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-153-0915]
gi|420947700|ref|ZP_15410950.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-154-0310]
gi|420952890|ref|ZP_15416132.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0626]
gi|420957061|ref|ZP_15420296.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0107]
gi|420963430|ref|ZP_15426654.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-1231]
gi|420998785|ref|ZP_15461920.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0912-R]
gi|421003307|ref|ZP_15466429.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0912-S]
gi|353452092|gb|EHC00486.1| formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus 47J26]
gi|392137129|gb|EIU62866.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-151-0930]
gi|392147726|gb|EIU73444.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-153-0915]
gi|392151803|gb|EIU77510.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0626]
gi|392154730|gb|EIU80436.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
1S-154-0310]
gi|392177567|gb|EIV03220.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0912-R]
gi|392192010|gb|EIV17634.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0912-S]
gi|392246343|gb|EIV71820.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-1231]
gi|392250892|gb|EIV76365.1| formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense
2B-0107]
gi|395458259|gb|AFN63922.1| Formamidopyrimidine-DNA glycosylase [Mycobacterium massiliense str.
GO 06]
Length = 286
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 46/303 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E V L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIACDPLDELFEVGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---- 227
K LLDQ+ +SG+GN ADE L++A++H + +S+ +L V+ AL
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWRARVHGRRLTDGMSRAKLTEVLDSAAAVMRLALAQGG 225
Query: 228 --------EVGADSSQFPSNWIFHSREKKP----GKAFVDGKKIDFITAGGRTTAYVPEL 275
V +S F + + RE +P G+A ++ F+ R++ + P
Sbjct: 226 TSFDDLYVNVNGESGYFDRSLEAYGREGEPCRRCGRAM---RREAFMN---RSSYFCPSC 279
Query: 276 QKL 278
Q+L
Sbjct: 280 QRL 282
>gi|395234046|ref|ZP_10412277.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter sp. Ag1]
gi|394731412|gb|EJF31193.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter sp. Ag1]
Length = 269
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILYAVVRNARL---RWPVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRILA--------------EELPAEKHDHVDLIMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + +S LGP+ L + + + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWGKELEGSNVLSHLGPEPLSDTFSAEYLREKSAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP ++A SLSK+ TL+ IK V+++++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRSAQSLSKKESETLVAAIKAVLQRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P + V G I R+T Y Q+
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR--VCGTPISAAKHAQRSTYYCRRCQR 269
>gi|226224165|ref|YP_002758272.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|386732302|ref|YP_006205798.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeria monocytogenes 07PF0776]
gi|406704339|ref|YP_006754693.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes L312]
gi|225876627|emb|CAS05336.1| Putative formamidopyrimidine-DNA glycosylase [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|384391060|gb|AFH80130.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeria monocytogenes 07PF0776]
gi|406361369|emb|CBY67642.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes L312]
Length = 273
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 129/288 (44%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|377564337|ref|ZP_09793659.1| formamidopyrimidine-DNA glycosylase [Gordonia sputi NBRC 100414]
gi|377528519|dbj|GAB38824.1| formamidopyrimidine-DNA glycosylase [Gordonia sputi NBRC 100414]
Length = 295
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 112/250 (44%), Gaps = 30/250 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E+H +G+ I + V V A D + G IL+A R+G
Sbjct: 1 MPELPEVETVRAGLEKHVVGRTITDVEVLHPRAVRRHVGDAPDLVGRLRGATILAARRRG 60
Query: 60 KNLWLRLDSPP----FP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K LWL + +P F GM+G + + V + V+ L
Sbjct: 61 KYLWLDVAAPDGVDRFALVVHLGMSGQMLVARVGAPDHTHLRVR-------------AAL 107
Query: 115 DDGLELSFTDKRRF----------AKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG EL F D+R F A L D ++P I+ + PD D+
Sbjct: 108 DDGNELRFVDQRTFGGWHLDDYVDAGDELPGDSGALPRSIAHIAPDPFDPAFDRDDVVRR 167
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
+ K +K LLDQS ISG+GN ADE L++A+++ + +S+ A LL V+
Sbjct: 168 MRGKHTEVKRALLDQSLISGVGNIYADEALWRARLNGARVTDGISRRKLAELLDAATAVM 227
Query: 224 EKALEVGADS 233
AL VG S
Sbjct: 228 SDALAVGGTS 237
>gi|269929067|ref|YP_003321388.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM
20745]
gi|269788424|gb|ACZ40566.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM
20745]
Length = 286
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 129/292 (44%), Gaps = 25/292 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARR I E +G+ +V + V+ + +++G + R GK
Sbjct: 1 MPELPEVEAARRGIAEQLLGRVLVGYELTRPALVVPAPGLT--LDALVGSRLECVERHGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDE-WPSKYSKFFVELDDGL 118
L+L + P + G + +G + + V D P K + + D
Sbjct: 59 YLFLSFE-PAVLVIHLKLAGQLVARGSGIPGFAAGHPVPAYDAPLPHKSTHLRFDFDGDA 117
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISE---LGPDALLEPMTVDEFTDSLSKKKI-TIKAL 174
L TD R FA+V LL +P E LGPD L TV+ L+++ + +K
Sbjct: 118 HLYLTDIRHFARVWLLPH-DDLPAFREGLHLGPDVLDPAFTVETLRQGLARRTVGRLKPT 176
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA--- 231
LLDQS ++G+GN DE L+QAK+HP +TA SL+ L + I +E AL G
Sbjct: 177 LLDQSLVAGLGNIYVDESLWQAKLHPERTAASLTDAEIERLYEGIHTTMELALPTGGARI 236
Query: 232 -------DSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ +FP H RE P G I I R T P+ Q
Sbjct: 237 LNSKAQTEVGEFP---FVHGREGLPCPRC--GTAIIKIRVNNRGTYLCPQCQ 283
>gi|401683598|ref|ZP_10815484.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. BS35b]
gi|418974970|ref|ZP_13522879.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK1074]
gi|383348341|gb|EID26300.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK1074]
gi|400187676|gb|EJO21870.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. BS35b]
Length = 274
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSIEIRYPKMIK-TDLEEFQRELPGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQIPERKHAHIFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFVSKKLGPEPREQDFDLQVFQAALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 272
>gi|295836306|ref|ZP_06823239.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74]
gi|295825948|gb|EFG64563.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74]
Length = 284
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 134/296 (45%), Gaps = 35/296 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ + + + V V+ DF A + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + ++ A K+ + + DD L
Sbjct: 61 KYLWLPLDGAGEAVLAHLGMSGQLLVQPHAAPA-------------EKHLRLRIGFDDAL 107
Query: 119 --ELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L P I+ + D L +P+ D F +L +K+ IK
Sbjct: 108 GTELRFVDQRTFGGLSLHETGEGGVPDVIAHIARDPL-DPLFDDAAFHAALRRKRTAIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG--- 230
LLDQS ISG+GN ADE L++A++H + SL++ LL +++V+ AL VG
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTASLTRPRTDELLGHVRDVMNAALAVGGTS 226
Query: 231 ---------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+S F + + RE +P + G I R++ Y P+ Q+
Sbjct: 227 FDSLYVNVNGESGYFDRSLDAYGREDEPCRRC--GTPIRRDAWMNRSSYYCPKCQR 280
>gi|196230365|ref|ZP_03129227.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus
Ellin428]
gi|196225295|gb|EDY19803.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus
Ellin428]
Length = 264
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 19/280 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPEL EVE R+ + + KKI + ++ GV A++ G A + + K
Sbjct: 1 MPELAEVEYYRKEWDAG-LRKKITAVELHAGKRIFRGVDTKRLAATLKGAAYTGSEARAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ R + GM+G + R KD + P ++ + L
Sbjct: 60 LMCFRFSGGVWLGVHLGMSGEL-----------RVEAKDFE--PGRHDHLVLR-QSARSL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEP-MTVDEFTDSLSKK-KITIKALLLDQ 178
F+D R+F +V ++ + P P A+ P T++ + L ++ ++ +KA LL Q
Sbjct: 106 VFSDPRQFGRVHF-HEGRAEPEWWAKLPPAVTSPEFTLERMSAFLKRRARLAVKAALLVQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-VGADSSQFP 237
+ G+GNW+ADE+L+QA+I P LS++ A + + +E+ + +L+ +G D S P
Sbjct: 165 TAFPGVGNWMADEILWQARIDPRALCGKLSRKQIAAIWEKAREICQVSLDTIGKDYSDPP 224
Query: 238 SNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+W+ H R G DG ++ T GGRTT + Q+
Sbjct: 225 EDWLIHQRWTNKGLCPRDGLQLKTATIGGRTTRWCARCQR 264
>gi|121534306|ref|ZP_01666130.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans
Nor1]
gi|121307076|gb|EAX47994.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans
Nor1]
Length = 274
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 16/235 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + + +G++I +++ D +++ S S+F+ +V G+ I R+GK
Sbjct: 1 MPEMPEVETIRRTLADKVVGRRI-EAVKIDLPRLVKWPSVSEFKEAVTGRKIERLDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L RL+ MTG +Y Y + + K++ +LD+ L
Sbjct: 60 YLLFRLEHDLVMVVHLRMTGRLY--------YVPAGYQH-----DKFTHIVFDLDNNDAL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R + ++ D + ++ +GP+ L T D F L K++ +IKA+LL+Q
Sbjct: 107 IYADSRTLGTLYAIHLADLGRIAGLATMGPEPLSPEFTFDYFRMMLKKRQSSIKAVLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
I G+GN DE L A I P + A SLS++ L + I +VIE+ + G S
Sbjct: 167 QLIGGLGNIYVDESLAVAGIAPTRPAASLSEDETQKLYRAINQVIEEGIAHGGTS 221
>gi|397660615|ref|YP_006501317.1| formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca E718]
gi|394348619|gb|AFN34740.1| Formamidopyrimidine-DNA glycosylase [Klebsiella oxytoca E718]
Length = 269
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + + S R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVFSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKALEGHPVLAHLGPEPLSDEFNADYLQAKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>gi|307703776|ref|ZP_07640717.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis ATCC
35037]
gi|307622611|gb|EFO01607.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis ATCC
35037]
Length = 274
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I +F+ V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEITYPKMIK-TDLDEFQKEVSGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+ +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFIRFEDGGT 103
Query: 120 LSFTDKRRFAKVRLL-NDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL ++ +S+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVHELLDAYFVSKKLGPEPRDQDFDLQSFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEALAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 272
>gi|148360789|ref|YP_001251996.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila str.
Corby]
gi|296106144|ref|YP_003617844.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila 2300/99
Alcoy]
gi|148282562|gb|ABQ56650.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila str.
Corby]
gi|295648045|gb|ADG23892.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila 2300/99
Alcoy]
Length = 274
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ I+ H G+ I + + N+ + + GK I + R+GK
Sbjct: 1 MPELPEVETTKQGIKPHLEGRMI--TAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L +D + GM+G + I V T P K+ + +++GL L
Sbjct: 59 YILLHMDKG-YLLIHLGMSGHLRI------------VSQTAN-PQKHDHIDLHINNGLAL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ +P P ++ LGP+ L + + + K +IK+ ++D
Sbjct: 105 RFCDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQ 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ GIGN A E L+ AKIHP +A ++ E L IK+++E A+E G + +
Sbjct: 165 IVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNALTGHIKKILESAIEAGGTTLR---- 220
Query: 240 WIFHSREKKPGK--------------AFVDGKKIDFITAGGRTTAYVPELQKL 278
F+S + KPG V KI+ + GR +A+ P Q +
Sbjct: 221 -DFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPI 272
>gi|146319050|ref|YP_001198762.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33]
gi|146321256|ref|YP_001200967.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33]
gi|386578232|ref|YP_006074638.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis GZ1]
gi|145689856|gb|ABP90362.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33]
gi|145692062|gb|ABP92567.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33]
gi|292558695|gb|ADE31696.1| Formamidopyrimidine-DNA glycolase [Streptococcus suis GZ1]
Length = 297
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 138/292 (47%), Gaps = 29/292 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 23 LPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 80
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L S M G +Y A D+ P+ K+ F DG
Sbjct: 81 YLLIYLTDHVLIS-HLRMEG----------KYNFFA----DQVPANKHFHAFFTFIDGST 125
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D + ++GP+ E ++EF L+K K IK+ LLD
Sbjct: 126 LVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLD 185
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
QS ++G+GN DEVL++AK+HP QT+ LS + A L + EV++ +E G + +
Sbjct: 186 QSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSTDQVADLRQATIEVLQLGIEKGGSTIRTY 245
Query: 238 SNWI--------FHSREKKPGKAFVDGK-KIDFITAGGRTTAYVPELQKLNG 280
N + + K G+A + +I I GGR T + P+ Q +G
Sbjct: 246 KNALGMDGTMQDYLQVYGKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKHG 297
>gi|254556430|ref|YP_003062847.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1]
gi|254045357|gb|ACT62150.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1]
Length = 274
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I SI K+I+ F+ + + I + R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVSGATIA-SIEVFWPKIINN-DVDSFKQRLANQTIQTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + K + V ++ K++ L D +L
Sbjct: 59 YLLFR--------FSNGLTMVSHLR----MEGKYNVVPRGED-QGKHTHVIFHLTDDRDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + ++V + +GP+ + E +T+ T + K K IK LLLDQ
Sbjct: 106 LYNDTRKFGRMTLVPTGEESTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
S I+GIGN ADE L+ +KIHP++ A SL+ + ATL + I + + A++
Sbjct: 166 SKIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
++ QF ++ + RE +P + G I+ I R T + P Q+L
Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPCERC--GTIIEKIKVAQRGTHFCPLEQRL 274
>gi|407784911|ref|ZP_11132060.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Celeribacter baekdonensis B30]
gi|407204613|gb|EKE74594.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Celeribacter baekdonensis B30]
Length = 283
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 26/293 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G I + A+ N+ + A + G + R+
Sbjct: 1 MPELPEVETVRRGLEPSMAGAVIAR---AEVNRPDLRWPFPEHMAARLTGARVERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS--KYSKFFVELDDG 117
K + LD+ GM+G + + G + Q+ E P K+ + +G
Sbjct: 58 KYILADLDTAETLLIHLGMSGRMTVSGDPLGQF-------AHEHPQLEKHDHVVFHMGNG 110
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
++F D RRF + L+ + + P +++LGP+ L + + K IK L
Sbjct: 111 ARVTFNDPRRFGAMDLMATDAEAAHPLLAKLGPEPLGNQFDEAHLIAAFTGKNSPIKTAL 170
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
LDQ ++G+GN EVL++A IHP + A ++K A+L+ I++V+ +A+E G S
Sbjct: 171 LDQHIVAGLGNIYVCEVLFRAGIHPTRKAGQIAKARVASLVPIIRDVLSEAIEAGGSSLK 230
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F N+ + RE P + +I I GR+T + P Q+
Sbjct: 231 DFRQADGELGYFQHNFRVYGREGAPCVSPECTSEIKRIVQSGRSTFFCPICQR 283
>gi|291614819|ref|YP_003524976.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus
ES-1]
gi|291584931|gb|ADE12589.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus
ES-1]
Length = 271
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 125/289 (43%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H ++IV +I + + + + + G + R+ K
Sbjct: 1 MPELPEVETTLRGIAPHLKQRRIVDVVIRNPD--LRWPIPGNLPELLRGHIVQDLQRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + GM+G++ I+ + D K+ F + +D+G L
Sbjct: 59 YLLISFGHGTL-ILHLGMSGSLRIQPL-------------DTSAEKHDHFDLVMDNGQLL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
D RRF V D P ++ LGP+ LL D + K+K IK +++D
Sbjct: 105 RLRDPRRFGAVLWHQGDVAQHPLLASLGPEPLLAGFDADTLYAATRKRKAAIKLVIMDNH 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A+E L++A I P A +SKE CA L IKEV+ A+ G S +
Sbjct: 165 VVVGVGNIYANEALFRAGIRPQLAAGKISKERCARLTVTIKEVLRAAIRKGGSSLRDYVD 224
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + R +P + V I I G R+T Y P QK
Sbjct: 225 SNGKQGYFQQHYFAYGRTGEPCR--VCATPIRQIRQGQRSTFYCPRCQK 271
>gi|422020406|ref|ZP_16366945.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia alcalifaciens Dmel2]
gi|414101542|gb|EKT63141.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia alcalifaciens Dmel2]
Length = 269
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 38/292 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +I+ ++ S+ + + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAIVRNERL---RWPVSEQIKRLSDETVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L + GM+G++ I T+E P K+ + L DG
Sbjct: 58 YLLIELRKG-WIIVHLGMSGSVRIL--------------TEELPEEKHDHVDLILGDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF D ++ LGP+ L + D +K+K+ +K L+D
Sbjct: 103 LRYTDPRRFGAWLWCEDLAFSSVLAHLGPEPLSDEFNPQYLFDLAAKRKVAVKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ G+GN A+E L+ +KI P + +L+ L+ IK+V+++++E G + +
Sbjct: 163 VVVGVGNIYANEALFASKISPEKLTNTLTLNEITELVTQIKKVLQRSIEQGGTTLK---- 218
Query: 240 WIFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F + KPG + FV GKK I+ I G RTT Y P+ QK
Sbjct: 219 -DFLQSDGKPGYFAQELFVYGKKGEPCSLCGTPIESIKQGQRTTFYCPQCQK 269
>gi|424864031|ref|ZP_18287939.1| DNA-formamidopyrimidine glycosylase [SAR86 cluster bacterium
SAR86B]
gi|400759962|gb|EJP74139.1| DNA-formamidopyrimidine glycosylase [SAR86 cluster bacterium
SAR86B]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 21/254 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD-DNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPEL EV A IGK +K I A+ ++V + D + + + S+ G
Sbjct: 1 MPELAEVAFACGKWNS-GIGK-FIKEIYANPSSRVYRDLLPKDVVSELTKAKLTSSATHG 58
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + +L + GMTG+++I +K A+ +
Sbjct: 59 KQMLFKLSGDKWLGVHLGMTGSLHINCSNYQNHKHDAL--------------ILYQSNQA 104
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEP-MTVDEFTDSLSKK-KITIKALLLD 177
L F D R+F ++RL T SEL P ++L+P + + +LS+ K +KALLLD
Sbjct: 105 LIFKDPRQFGRLRLHTGKTPPSWWSEL-PTSMLDPTFKISILSKALSRHGKRPVKALLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-VGADSSQF 236
Q Y G+GNW+ADEVL+++ IHP + ++ CA L IK V+ A++ VG
Sbjct: 164 QKYFQGMGNWMADEVLWRSGIHPARLGSKINSAECANLFSQIKFVVHGAMKSVGKHGGDP 223
Query: 237 PSNWIFHSREKKPG 250
P W+FH R K G
Sbjct: 224 PKGWLFHVRWKNGG 237
>gi|347541319|ref|YP_004848745.1| formamidopyrimidine-DNA glycosylase [Pseudogulbenkiania sp. NH8B]
gi|345644498|dbj|BAK78331.1| formamidopyrimidine-DNA glycosylase [Pseudogulbenkiania sp. NH8B]
Length = 272
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 30/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H G I+ ++ + ++ V + A++ G +L+ R+ K
Sbjct: 1 MPELPEVETTRRGVEPHLTGA-IITDVVVREGRLRWPVPPA-LAATLSGLPVLAVRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S GM+G++ R DT P K+ + LD L
Sbjct: 59 YLLLEFASGTL-LVHLGMSGSL-----------RLVAADTP--PQKHDHIDLILDGHTAL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D RRF + P P+ + LGP+ L + D + + +IK LL+D
Sbjct: 105 RYRDPRRFGAMLWHVGPVEFHPLLAALGPEPLGDAFDADTLYHASRGRTTSIKQLLMDNH 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A+E L+QA I P + A L+ C L IK ++ +A+E G + +
Sbjct: 165 VVVGVGNIYANESLFQAGIRPGRAARRLTHADCERLAAAIKSILARAIEAGGSTLRDFVG 224
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + R ++P G I I G R++ Y P Q
Sbjct: 225 ASGKPGYFQQTYAVYGRAEEP--CHTCGSLIRQIRQGQRSSYYCPHCQ 270
>gi|448821040|ref|YP_007414202.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum ZJ316]
gi|448274537|gb|AGE39056.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum ZJ316]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I SI K+I+ F+ + + I + R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVSGATIA-SIEVFWPKIINN-DVDSFKQRLANQTIQTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + K + V ++ K++ L D +L
Sbjct: 59 YLLFR--------FSNGLTMVSHLR----MEGKYNVVPRGED-QGKHTHVIFHLTDDRDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ + E +T+ T + K K IK LLLDQ
Sbjct: 106 LYNDTRKFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
S I+GIGN ADE L+ +KIHP++ A SL+ + ATL + I + + A++
Sbjct: 166 SKIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNIIDEMTMAIKGHGTTVHSFS 225
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
++ QF ++ + RE +P + G I+ I R T + P Q+L
Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPCERC--GTIIEKIKVAQRGTHFCPLEQRL 274
>gi|422809645|ref|ZP_16858056.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-208]
gi|378753259|gb|EHY63844.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL
J1-208]
Length = 273
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 129/288 (44%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFAAGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKRIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>gi|322374469|ref|ZP_08048983.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C300]
gi|321279969|gb|EFX57008.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C300]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I +F V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEVRYPKMIK-TDLDEFRKEVPGRVIESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ + +DG
Sbjct: 59 YLLFYLKDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVLIHFEDGST 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFVSKKLGPEPIEQDFDLQSFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEALAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 272
>gi|340028393|ref|ZP_08664456.1| formamidopyrimidine-DNA glycosylase [Paracoccus sp. TRP]
Length = 281
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 18/288 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H + I ++ + + D + G + R+ K
Sbjct: 1 MPELPEVETVRRGLEPHLTNRIITRAEARRPD--LRRPLPPDMVQVLTGARVTGLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L+ GM+G + I+G + + R D P ++ + ++G +
Sbjct: 59 YILADLEDRGSLLLHLGMSGRMLIEGESQGDFHR----DPAILP-RHDHVVLWTEEGTRI 113
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+F D RRF + L+ S P ++ LGP+ L + T ++ +L+ +++ IKA LLDQ
Sbjct: 114 TFNDARRFGLIDLVAPGESHPLLAHLGPEPLSDTFTPEKLLQALAGRRMPIKAALLDQRI 173
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ----- 235
++G+GN E LY+A I P + A ++++ A L+ ++ V+E+A+ G S +
Sbjct: 174 VAGLGNIYVSEALYRAGIDPRRLAGAVAEAEIAALVNHVRAVLEEAIAAGGSSLRDHRQA 233
Query: 236 ------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE P I I GR++ + P Q+
Sbjct: 234 TGELGYFQHSFRVYDREGAPCPTPGCTGAIARIVQSGRSSYFCPVCQR 281
>gi|433608890|ref|YP_007041259.1| Formamidopyrimidine-DNA glycosylase [Saccharothrix espanaensis DSM
44229]
gi|407886743|emb|CCH34386.1| Formamidopyrimidine-DNA glycosylase [Saccharothrix espanaensis DSM
44229]
Length = 286
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 20/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + + + + A+DF + + G+ ++ A R+G
Sbjct: 1 MPELPEVEVVRRGLHEHVAGRTVAAVEVLHARAIRRHLPGAADFASRLAGRTMVGARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL-DDGL 118
K LW+ L GM+G + V+ D K+ + V D+G
Sbjct: 61 KYLWVDLSDGDALLAHLGMSGQML-------------VQPLDAPDEKHLRVRVRFADEGP 107
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
EL F D+R F + L D T +P P++ + D + D +L +++ +K
Sbjct: 108 ELRFVDQRTFGGLALAEIVEVDGTPLPVPVAHIARDPMDPVFDPDAAVTALRRRRTEVKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SG+GN ADE L++ ++H L+ L++ A LL +V+ +AL G S
Sbjct: 168 ALLDQTLVSGVGNIYADEALWRTRLHGLRPTEKLTRAKAAELLGHATDVMREALGEGGTS 227
>gi|72161056|ref|YP_288713.1| formamidopyrimidine-DNA glycosylase [Thermobifida fusca YX]
gi|90101321|sp|Q47S77.3|FPG_THEFY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|71914788|gb|AAZ54690.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Thermobifida fusca YX]
Length = 296
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 16/242 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E+ +G + + V A+DF A V G + A R+G
Sbjct: 1 MPELPEVEVVRRGLEKWVVGASFGEVEVLHPRAVRRHAPGAADFAARVSGCGVTEARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL LDS GM+G + + + A ++ R + T ++ + +
Sbjct: 61 KYLWLTLDSGEALLAHLGMSGQLLVQPRHAAAERHLRVRLPLT-------ARQGHDPEAP 113
Query: 118 LELSFTDKRRFAKV---RLLNDPTS--VPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
EL F D+R F + RL++D T +P IS + D L D F +L +K+ +
Sbjct: 114 QELRFVDQRTFGHLLVDRLVDDGTGTGLPSVISHIARDPLDPAFDEDAFAAALCRKRTEL 173
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLDQS ISGIGN ADE L+ +++H +LS+ ATLL ++EV+ AL G
Sbjct: 174 KRALLDQSLISGIGNIYADEALWMSQLHWATPTEALSRSQVATLLAAVREVMVAALAQGG 233
Query: 232 DS 233
S
Sbjct: 234 TS 235
>gi|302522138|ref|ZP_07274480.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78]
gi|318056549|ref|ZP_07975272.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces sp. SA3_actG]
gi|318076723|ref|ZP_07984055.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces sp. SA3_actF]
gi|302431033|gb|EFL02849.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78]
Length = 284
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 134/296 (45%), Gaps = 35/296 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ + + + V V+ DF A + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + ++ A + V+ + DD L
Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPAERHLRVR-------------IGFDDAL 107
Query: 119 --ELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L P I+ + D L +P+ D F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHETGEGGVPDVIAHIARDPL-DPLFDDAAFHAALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG--- 230
LLDQS ISG+GN ADE L++A++H + L++ LL +++V+ AL VG
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTAGLTRPRTDELLGHVRDVMNAALAVGGTS 226
Query: 231 ---------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+S F + + RE +P + G I R++ Y P+ Q+
Sbjct: 227 FDSLYVNVNGESGYFDRSLDAYGREGEPCRRC--GTPIQRDAWMNRSSYYCPKCQR 280
>gi|149203140|ref|ZP_01880111.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035]
gi|149143686|gb|EDM31722.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035]
Length = 283
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 20/290 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I + + + + + A + G+ + + R+ K
Sbjct: 1 MPELPEVETVRRGLTPVMEGQVIASASV--NRPDLRWPFPPNMAARLTGQTVTALRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L S GM+G + + G + ++ V D P K+ ++ +G +
Sbjct: 59 YILADLTSGESLLIHLGMSGRMLVSGDPLGRF----VHD-HPAPEKHDHVVFDMANGARI 113
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + LL T + P ++ +GP+ L + +L + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMDLLPTATAETHPLLARIGPEPLGNAFSEPYLVAALKGRNTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN E LY+A++ PLQ A +LS + A L+ I++V+ A+ G S +
Sbjct: 174 RIVAGLGNIYVCEALYRARLSPLQRAGALSGKRAAALVPIIRDVLSDAISAGGSSLRDFR 233
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE +P ++ I + GR++ Y P Q+
Sbjct: 234 QADGELGYFQHSFDVYGREGEPCRSPGCNGHIARVVQAGRSSFYCPLCQR 283
>gi|419808834|ref|ZP_14333733.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae 14628]
gi|390605739|gb|EIN15117.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae 14628]
Length = 279
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ +A++ + + I I+ D K+I + S+F+ +L + IL H GK
Sbjct: 1 MPELPEVKTVVKALKSNVLNSTITNVIVKLD-KLIKNATPSEFKNYLLNEKILDVHNVGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+ +L + MTG Y G S + +T K+ EL++ + L
Sbjct: 60 NIIYKLTNNKNLISHLRMTGK-YFTG--------SNINNT----RKHDYIIFELNNQIFL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVD--EFTDSLSKKKITIKALLL 176
+ D R+F + N+ S P+++LG +E ++D D + K I IK+ LL
Sbjct: 107 FYNDSRQFGTFHIKDDNELFSTKPLNKLG----IEVDSIDPKNLYDLVRNKSIPIKSFLL 162
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS--- 233
DQSYI GIGN A+E+L+ +KI P + E +L K +++KA E+G +
Sbjct: 163 DQSYILGIGNIYANEILFLSKISPWTKTNKIPYEKFVEILSNTKIILDKATELGGSTIVD 222
Query: 234 --------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
QF + H R P + +FI R T Y P QK N Q
Sbjct: 223 FSGLNGAEGQFQNYLQVHMRTNLPCNKCSALIQQEFI--AQRMTYYCPVCQKENYEQ 277
>gi|419780162|ref|ZP_14306012.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK100]
gi|383185321|gb|EIC77817.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK100]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI IA + +F V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIEIAYPKMI--KTDLDEFRKEVPGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+E +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFIEFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDRLDAYFISKKLGPEPKDQNFDLQVFQAALAKSKKLIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A+++P + + +L+ + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVYPARPSQTLTAAEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ I GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTIIEKIQLGGRGTHFCPQCQR 272
>gi|417934651|ref|ZP_12577971.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis bv. 2 str.
F0392]
gi|340771221|gb|EGR93736.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis bv. 2 str.
F0392]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI IA + +F+ V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMI--KTDLDEFQKEVPGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLGAYFVSKKLGPEPREQDFDLQVFQTALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTVEEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQECARCGTLIEKIQLGGRGTHFCPTCQR 272
>gi|300767154|ref|ZP_07077066.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308180374|ref|YP_003924502.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380032358|ref|YP_004889349.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1]
gi|418275034|ref|ZP_12890446.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
plantarum NC8]
gi|38257325|sp|Q88WV4.3|FPG_LACPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|300494973|gb|EFK30129.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308045865|gb|ADN98408.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342241601|emb|CCC78835.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1]
gi|376009505|gb|EHS82833.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I SI K+I+ F+ + + I + R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVSGATIA-SIEVFWPKIINN-DVDSFKQRLANQTIQTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + K + V ++ K++ L D +L
Sbjct: 59 YLLFR--------FSNGLTMVSHLR----MEGKYNVVPRGED-QGKHTHVIFHLTDDRDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ + E +T+ T + K K IK LLLDQ
Sbjct: 106 LYNDTRKFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
S I+GIGN ADE L+ +KIHP++ A SL+ + ATL + I + + A++
Sbjct: 166 SKIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
++ QF ++ + RE +P + G I+ I R T + P Q+L
Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPCERC--GTIIEKIKVAQRGTHFCPLEQRL 274
>gi|315612999|ref|ZP_07887910.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis ATCC
49296]
gi|315315109|gb|EFU63150.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis ATCC
49296]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI +I K+I +F+ V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SNIEITYPKMIK-TDLKEFQKEVPGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFVSKKLGPEPREQDFDLQVFQAALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGAVIEKFQLGGRGTHFCPQCQR 272
>gi|307609359|emb|CBW98845.1| hypothetical protein LPW_06351 [Legionella pneumophila 130b]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ I+ H G+ I + + N+ + + GK I + R+GK
Sbjct: 1 MPELPEVETTKQGIKPHLEGRMI--TAVQVRNRKLRLPVPLNLNELCEGKHITAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L +D + GM+G + I V+Q P K+ + +++GL L
Sbjct: 59 YILLHMDKG-YLLIHLGMSGHLRI----VSQTAN---------PQKHDHVDLHINNGLAL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ +P P ++ LGP+ L + + + K +IK+ ++D
Sbjct: 105 RFCDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQ 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ GIGN A E L+ AKIHP +A ++ E +L IK+++E A+E G + +
Sbjct: 165 IVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLR---- 220
Query: 240 WIFHSREKKPGK--------------AFVDGKKIDFITAGGRTTAYVPELQKL 278
F+S + KPG V KI+ + GR +A+ P Q +
Sbjct: 221 -DFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPI 272
>gi|270292906|ref|ZP_06199117.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M143]
gi|270278885|gb|EFA24731.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M143]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 39/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GK+I S+ K+I +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKRI-SSLEIRYPKMIK-TDLEEFQKELPGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE-------LGPDALLEPMTVDEFTDSLSKKKITIK 172
L + D R+F + LL VP + E LGP+ + + F +L+K K IK
Sbjct: 104 LVYEDVRKFGTMELL-----VPDLLEAYFISKKLGPEPKDQDFDLQVFQAALAKSKKPIK 158
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
+ LLDQ+ ++G+GN DEVL++A++HP +++ SL+ E + + V+ +A+E G
Sbjct: 159 SHLLDQTLVAGLGNIYVDEVLWRAQVHPARSSQSLTAEEASAIHDQTIAVLRQAVEKGGS 218
Query: 233 SSQFPSNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+ + +N FH K G+ G I+ I GGR T + P+ Q+
Sbjct: 219 TIRTYTNAFGEDGTMQDFHQVYDKAGQECSRCGTLIEKIQLGGRGTHFCPQCQR 272
>gi|283836014|ref|ZP_06355755.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC
29220]
gi|291068196|gb|EFE06305.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC
29220]
Length = 269
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATV-RNGRLRWPVSEEIYRLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTTELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLSK+ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSKDECGLLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P + + G I RTT Y QK
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCR--ICGTPIVAAKHAQRTTFYCRRCQK 269
>gi|146278626|ref|YP_001168785.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC
17025]
gi|166198740|sp|A4WVR6.1|FPG_RHOS5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|145556867|gb|ABP71480.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Rhodobacter sphaeroides ATCC 17025]
Length = 283
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 24/292 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ I ++ + + + + G+ +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPAMAGRLISEARVNRPD--LRWPLPPRMAERLTGQRVLRLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L GM+G + + G V + V D P+++ +E++ G +
Sbjct: 59 YILADLSGGESLLIHLGMSGRMLVSGARVGDF----VHD-HPAPARHDHVVLEMEGGARV 113
Query: 121 SFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+F D RRF + L+ PT P ++ LGP+ L L+ ++ +KA LL
Sbjct: 114 TFNDARRFGAMDLV--PTEAAETHPLLASLGPEPLGNAFDGAYLAARLTGRRTPVKAALL 171
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
DQ ++G+GN EVL++A + P++ A SL + A L+ I+EV+ +A+E G S +
Sbjct: 172 DQRIVAGLGNIYVCEVLFRAGLAPVRLAGSLGEARAAGLVPIIREVLSEAIEAGGSSLRD 231
Query: 236 ----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE +P + I GR++ + PE Q+
Sbjct: 232 YRQADGELGYFQHTFRVYGREGQPCVTPGCRGLVGRIVQSGRSSFHCPECQR 283
>gi|307709150|ref|ZP_07645609.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK564]
gi|307620096|gb|EFN99213.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK564]
Length = 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I +F+ V G+ I S R+GK
Sbjct: 1 MPELPEVETIRRGLEKLILGKKI-SSIEIRYPKMIK-TDLDEFQKEVPGQIIESMERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPSKQDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLSQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQECSRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|148377581|ref|YP_001256457.1| foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae PG2]
gi|148291627|emb|CAL59013.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae PG2]
Length = 279
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 137/296 (46%), Gaps = 33/296 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ +A++ + + I I+ D K+I +AS+F+ +L + IL + GK
Sbjct: 1 MPELPEVKTVVKALKGNILNLTITNVIVKLD-KLIKNATASEFKNYLLNEKILDVYNVGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+ +L + MTG + S++ T K+ ELD + L
Sbjct: 60 NIIYKLSNNKNLVSHLRMTGK---------YFTDSSINRT----RKHDYIIFELDSQMFL 106
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDA-LLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F + ND S P+ +LG + ++P + E S+ K I IK+ LLD
Sbjct: 107 FYNDSRQFGTFHIKNDNELFSSKPLDKLGKEVDKIDPKNLYE---SVRNKSIPIKSFLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
QSYI GIGN A+E+L+ +KI+P + E +L K +++KA E+G +
Sbjct: 164 QSYILGIGNIYANEILFLSKINPWTKTNKIPYEKFKEILSNTKIILDKATELGGSTIVDF 223
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
QF ++ H R P + +FI R T Y P QK N Q
Sbjct: 224 SGLNGAEGQFQNHLQVHMRANMPCNKCNALIQQEFI--AQRMTYYCPICQKENYEQ 277
>gi|302554408|ref|ZP_07306750.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes
DSM 40736]
gi|302472026|gb|EFL35119.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes
DSM 40736]
Length = 286
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 19/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ + + ++ + V ++ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLQRWVAHRTVAETEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + ++ DE K+ + V D L
Sbjct: 61 KYLWLPLEDTDQSILAHLGMSGQLLVQPHTAP----------DE---KHLRIRVRFTDAL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
EL F D+R F + L N P +P I+ + D L E + F +L +K+ TIK
Sbjct: 108 DTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDEFFDDEAFHRALRRKRSTIKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A++H + +L++ +LL +++V+ AL VG S
Sbjct: 168 LLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRTLSLLGHVRDVMNAALAVGGTS 226
>gi|358464762|ref|ZP_09174720.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon
058 str. F0407]
gi|357066291|gb|EHI76441.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon
058 str. F0407]
Length = 274
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSLEIRYPKMIK-TDLEEFQKELPGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+ +DG
Sbjct: 59 YLLFYLTKKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFIRFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + + F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLEAYFVSKKLGPEPVEQYFDLQVFQVALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARASQTLTVAEATAIHDQTIAVLRQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAF-VDGKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSCCGTIIEKFQLGGRGTHFCPQCQR 272
>gi|406900324|gb|EKD43325.1| Formamidopyrimidine-DNA glycosylase [uncultured bacterium]
Length = 289
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ G+KI KSI K + S SDF ++ R+GK
Sbjct: 1 MPELPEVETIRRDLEKKIAGEKI-KSIEILAAKSVHNKS-SDFLKILIVNNFKHIERRGK 58
Query: 61 NLWLRLDSP---PFPSFQFGMTGAIYI---KGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L LD + MTG + K + + ++A+ DT P+K+++
Sbjct: 59 LLMFALDKVGKYAYLLVHLKMTGQLIYRHKKQILAGGHSQNAM-DTI-VPNKFTRVIFTF 116
Query: 115 DDGLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DG +L F D RRF ++L++ + I+ G + L T++ F K++I IKA
Sbjct: 117 GDGGQLFFNDLRRFGYLKLVSKEEKEKIVINSFGIEPLTPDYTLEAFQKLFKKRQINIKA 176
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
LLL+Q ISGIGN ADEV + AKI P + SLS L CI++V+ A+E
Sbjct: 177 LLLNQKLISGIGNIYADEVCFCAKILPTRKVGSLSGLEIKKLFYCIEDVLRVAIE 231
>gi|254295384|ref|YP_003061407.1| formamidopyrimidine-DNA glycosylase [Hirschia baltica ATCC 49814]
gi|254043915|gb|ACT60710.1| formamidopyrimidine-DNA glycosylase [Hirschia baltica ATCC 49814]
Length = 281
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 129/300 (43%), Gaps = 42/300 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS----------DFEASVLGK 50
MPELPEVE RR + I A +VI+ V DF + G
Sbjct: 1 MPELPEVETVRRGL------------IPAMQGRVIERVELRRADLRFPFPDDFSQRLQGV 48
Query: 51 AILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
I R+ K L + L S + GMTG I+G + + + K+
Sbjct: 49 KIERLDRRAKFLMVELSSGELLTMHLGMTGRFSIEGEGFDIFAHAIAGN-----PKHDHV 103
Query: 111 FVELDDGLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
L+D L+++F D RRF + L + S+LGP+ L + + L KK
Sbjct: 104 VFHLEDNLKVTFNDPRRFGFMELYRAGEAEKSKRFSKLGPEPLSNHFSAAHLNEVLQKKS 163
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
IK+ LLDQ ++G+GN E L++A I P + + ++ + L +K+VI +A+E
Sbjct: 164 SPIKSALLDQRVVAGLGNIYVCEALFRAGISPTRISSTIKGKRAEKLAPIVKDVISEAIE 223
Query: 229 VGADS-----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
G S F N++ + RE +P K V K + I+ GR+T + QK
Sbjct: 224 AGGSSISDFAQTDGKLGYFQHNFLVYGRENEPCK--VCDKPVQRISQSGRSTFFCASCQK 281
>gi|293365237|ref|ZP_06611954.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis ATCC
35037]
gi|291316687|gb|EFE57123.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis ATCC
35037]
Length = 288
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I +F+ V G+ I S R+GK
Sbjct: 15 MPELPEVETVRRGLEKLILGKKI-SSVEITYPKMIK-TDLDEFQKEVSGQVIESMGRRGK 72
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F+ +DG
Sbjct: 73 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFIRFEDGGT 117
Query: 120 LSFTDKRRFAKVRLL-NDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL ++ +S+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 118 LVYEDVRKFGTMELLVHELLDAYFVSKKLGPEPRDQDFDLQSFQAALAKSKKPIKSHLLD 177
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 178 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEALAIHDQTIAVLGQAVEKGGSTIRTY 237
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 238 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 286
>gi|115252785|emb|CAK98221.1| probable formamidopyrimidine-dna glycosylase protein [Spiroplasma
citri]
Length = 277
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 28/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H +GK I I + + + + +F ++ + I R GK
Sbjct: 1 MPELPEVETVRRILTKHVVGKTITDCQIFWNKIIKYPLDSKEFIKEIVKQKINRIDRMGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L LD S M G Y ++ + EW F ELD +L
Sbjct: 61 HLLFILDDYVLIS-HLRMEGKYYF----------TSKDEPGEWQHIMVLF--ELDHQFQL 107
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L ND P+++LG + E +TV +S K IK LL+Q
Sbjct: 108 RYHDTRKFGTMHLYSKNDYLQQAPLNKLGYEPFDEKITVSYLKNSWQNKSQPIKTTLLEQ 167
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ I GIGN A+E+L+ +KIHP + +L + +++ K V++KA++ G +
Sbjct: 168 NVIVGIGNIYANEILFASKIHPGEITKNLVDQDYQNIIENTKLVLQKAIDEGGTTIATYH 227
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+F H R K + + ID I GR T + QKL
Sbjct: 228 PEPGMDGKFLQQLKVHGRNKM--ECLNCHQLIDKIFINGRGTYFCNYCQKL 276
>gi|386856104|ref|YP_006260281.1| Formamidopyrimidine-DNA glycosylase [Deinococcus gobiensis I-0]
gi|379999633|gb|AFD24823.1| Formamidopyrimidine-DNA glycosylase [Deinococcus gobiensis I-0]
Length = 274
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 53/300 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR IE G+ I+ ++ + + G A+ +G+ + R+GK
Sbjct: 1 MPELPEVETTRRKIEPLLRGQ-IITAVRHEPSHRYQGTQAA------VGRRVKGLTRRGK 53
Query: 61 NLWLRLDSPPFPS---------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
L L+L +P GMTG ++ P K+++
Sbjct: 54 YLMLQLAAPGAAESEPHDLELIVHLGMTGGFRLE------------------PGKHTRVT 95
Query: 112 VELDDGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI 169
+E G L F D RRF K+ ++ + +P +S +GP+ L E DEF +
Sbjct: 96 LETGAG-ALHFDDPRRFGKMVVVRPGEYAGMPTLSGMGPEPLSEDFREDEFVARAATAG- 153
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
+K LL Q +SG+GN ADE L+ A+IHP QTA L+ + + L + ++EV+ +A+E
Sbjct: 154 AVKPWLLSQKPVSGVGNIYADEALWHARIHPAQTA--LNADEASRLYRAVREVMAQAVEA 211
Query: 230 GADS-SQFPSNWI--------FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQ 276
G S N+ F R + G+A G I I G R T + P+ Q
Sbjct: 212 GGSSLGNGEGNYRQHDGEQGGFQGRHQAYGRAGQPCARCGTPIAKIVLGQRGTHFCPQCQ 271
>gi|451944545|ref|YP_007465181.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451903932|gb|AGF72819.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 278
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 140/304 (46%), Gaps = 52/304 (17%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVL--GKAILSAH 56
MPELPEVE RR + +H +G V+ + N+ + +VL G I +
Sbjct: 1 MPELPEVEVVRRGLADHVLGATFHGVEVLHPRANR------GQEVPLAVLLDGARIDAVR 54
Query: 57 RKGKNLWLRL--DSPPFPSFQFGMTGAIYI--KGVAVTQYKR--SAVKDTDEWPSKYSKF 110
R+GK LWL L DS F GM+G + + G +++ R +A+ +D
Sbjct: 55 RRGKYLWLDLGEDSALF--VHLGMSGQMLVGEPGTCTSKHLRIRAALTASDA-------- 104
Query: 111 FVELDDGLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDAL---LEPMTVDEFTDSLSK 166
LEL+F D+R F + + +P P++ + D L +P+ V +
Sbjct: 105 -----RELELAFVDQRTFGRWLHTDTVDGIPLPVAHIARDPLEPDFDPVAVAR---RIRT 156
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
KK +K++LLDQ+ +SGIGN ADE L+ A++ P + A SL + TLL +EV+E+A
Sbjct: 157 KKSPVKSVLLDQTVVSGIGNIYADESLWAARVKPTRRAASLRQGDVVTLLAAAREVMERA 216
Query: 227 LEVGAD------------SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPE 274
LE G S F + + RE +P G I + R+T Y P
Sbjct: 217 LESGGTSFDALYVNVNGASGYFSRSLNVYGREGQPCPRC--GTPIRRVAFANRSTHYCPT 274
Query: 275 LQKL 278
Q L
Sbjct: 275 CQVL 278
>gi|379737164|ref|YP_005330670.1| Formamidopyrimidine-DNA glycosylase [Blastococcus saxobsidens DD2]
gi|378784971|emb|CCG04642.1| Formamidopyrimidine-DNA glycosylase [Blastococcus saxobsidens DD2]
Length = 300
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 30/251 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E+ G+ + + V + +D F ++ G+ + +AHR+G
Sbjct: 1 MPELPEVEVVRRGLEQWIAGRTVATVEVQHPRAVRRHLEGADHFVQALTGRTLAAAHRRG 60
Query: 60 KNLWLRLDSP-PFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
K LWL L P PS GM+G + ++ K SA +T F
Sbjct: 61 KYLWLPLAEPDGTPSGRALVAHLGMSGQLLVE-------KPSAPDET-----HLRARFTF 108
Query: 114 LDDGLELSFTDKRRF--------AKVRLLNDPTS--VPP-ISELGPDALLEPMTVDEFTD 162
D G EL F D+R F A+ + P + +PP ++ + D L VD F+
Sbjct: 109 ADGGRELRFVDQRTFGGLAVEECARAGGVAGPAAEEIPPRLAHIAIDPLDPSFDVDAFSV 168
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
+L +++ +K LLDQ+ I G+GN ADE L++A++H + L+ A LL+ +++V
Sbjct: 169 ALRRRRTEVKRALLDQTLIGGVGNIYADESLWRARLHGARPTDKLTGAQVADLLEGVRDV 228
Query: 223 IEKALEVGADS 233
+ ++L G S
Sbjct: 229 LGESLAQGGTS 239
>gi|194017136|ref|ZP_03055748.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061]
gi|194011004|gb|EDW20574.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061]
Length = 277
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ GK I I N + +F ++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRLVGETIQTIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + V + E K+ DG EL
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYRVHEAHEPYDKHVHVVFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LG + E T + + L K +K LLDQ
Sbjct: 107 RYHDVRKFGTMHLFQPGEEERELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
+ G+GN DEVL+++ IHP A LS ESC L K I + ++ A++ G
Sbjct: 167 KIVVGLGNIYVDEVLFKSGIHPETKANQLSLESCKVLHKQIIDTLQVAVDAGGSTIRSYI 226
Query: 231 ---ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D F + + R +P + G I+ GGR T + QK
Sbjct: 227 NSQGDIGTFQLQLLVYDRRGEPCQTC--GSIIEKTVVGGRGTHFCVTCQK 274
>gi|83941662|ref|ZP_00954124.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36]
gi|83847482|gb|EAP85357.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36]
Length = 283
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I ++ + + + D A + G+ + R+ K
Sbjct: 1 MPELPEVETVRRGLSPVMEGEVIARAEV--NRPDLRWPFPPDMAARLTGQRVTQLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L S GM+G + I G + Q+ V D P K+ + +G +
Sbjct: 59 YILADLSSGESLLVHLGMSGRMLISGDPLGQF----VHD-HPAPEKHDHVVFHMGNGARV 113
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + LL+ + S +S +GP+ L D +L K IK LLDQ
Sbjct: 114 TFNDPRRFGAMDLLDTASADSHKLLSSIGPEPLGNDFHEDHLIAALKGKNTPIKTALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN E LY+A IHP + A ++ + +L+ I++V+ +A+ G + +
Sbjct: 174 RIVAGLGNIYVCETLYRAGIHPARKAGRIAAKRVGSLVPIIRDVLNEAITAGGSTLRDFK 233
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + R +P ++ +I I GR++ Y P+ Q+
Sbjct: 234 RADGELGYFQHSFDVYGRAAEPCRSEGCTHQIARIVQSGRSSFYCPQCQR 283
>gi|289434844|ref|YP_003464716.1| hypothetical protein lse_1479 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171088|emb|CBH27630.1| fpg [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 273
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 132/291 (45%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++ GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQNLVPGKKI-DQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G K + +TDE SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG------------KFRLMNETDEV-SKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLN-----DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
F D R+F + + N D S I +LGP+ L T++ F + K IK L
Sbjct: 106 RFLDVRKFGTMEVTNKFGEADTNS---IKKLGPEPLTPAFTLEAFATGVKKTSRAIKTAL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ ++GIGN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 163 LDQKLVAGIGNIYADEICFEAKVRPERAANSLSNKEIKLVFEATKNIMTEAVALGGSTVR 222
Query: 236 FPSN-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK + +I+ I GR T + P QK
Sbjct: 223 TYVNSQGELGRYQEKLKVYGKTGEPCVICRTQIEKIKLNGRGTHFCPNCQK 273
>gi|354721361|ref|ZP_09035576.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter mori LMG 25706]
Length = 269
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 131/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRL---RWPVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDAFNAEYLKEKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P +A G + R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCRAC--GTPVIATKHAQRATFYCRQCQK 269
>gi|291320264|ref|YP_003515525.1| foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae]
gi|290752596|emb|CBH40568.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae]
Length = 279
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 33/296 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ +A++ + + I I+ D K+I + ++F+ +L + IL + GK
Sbjct: 1 MPELPEVKTVVKALKSNILNSTITNVIVKLD-KLIKNATPNEFKNYLLNEKILDVYNVGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
N+ +L + MTG Y +++ + + K+ ELD+ + L
Sbjct: 60 NIIYKLSNNKNLVSHLRMTGK-YFTDISINKTR------------KHDYIIFELDNQMFL 106
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDA-LLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F + ND S P+ +LG + ++P + E S+ K I IK+ LLD
Sbjct: 107 FYNDSRQFGTFHIKNDNELFSSKPLDKLGKEVDKIDPKNLYE---SVRNKSIPIKSFLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
QSYI GIGN A+E+L+ +KI P + E +L K +++KA E+G +
Sbjct: 164 QSYILGIGNIYANEILFLSKISPWTKTNKIPYEKFKEMLSNTKIILDKATELGGSTIVDF 223
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQ 282
QF ++ H R P + +FI R T Y P QK N Q
Sbjct: 224 SGLNGAEGQFQNHLQVHMRTNMPCNKCNALIQQEFI--AQRMTYYCPICQKENYEQ 277
>gi|417794314|ref|ZP_12441572.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK255]
gi|334270158|gb|EGL88565.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK255]
Length = 274
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I +F+ V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSIEVRYPKMIK-TDLDEFQKEVPGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ + +DG
Sbjct: 59 YLLFFLTDKVLIS-HLRMEGKYFYY--------------PDQIPERKHAHVLIHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFVSKKLGPEPREKNFDLQSFQVALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + SL++E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQSLTEEEATAVHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTIIEKFQLGGRGTHFCPQCQR 272
>gi|422575315|ref|ZP_16650856.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL001PA1]
gi|314923851|gb|EFS87682.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL001PA1]
Length = 280
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 136/295 (46%), Gaps = 33/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVS-ASDFEASVLGKAILSAH 56
MPELPEVE R +E H + +V S+ D + + G+ A+ FE ++ G+ + +
Sbjct: 1 MPELPEVETVRAGLE-HFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVN 59
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+GK LW LD GM+G + Q++ +++ + LDD
Sbjct: 60 RRGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHR-------------HTRIVITLDD 106
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
G +L F D+R F + L +P P+ + PD E VDE L ++ IK L
Sbjct: 107 GRDLRFLDQRTFGGLTLAPLVDGIPGPVIHIAPDPFEECFDVDEVARRLCARRSAIKRSL 166
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
LDQ+ +SGIGN ADE L++ + HP LS+ LL+ ++V+ +A+ G S
Sbjct: 167 LDQTLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAVELLQTARDVMAEAMSQGGTSFD 226
Query: 234 SQF-----PSNWIF-----HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
S + S W F + RE +P G I + R++ P Q+L
Sbjct: 227 SLYVNVNGESGWFFRVVDAYGREDEPCHRC--GMPIVRESFMNRSSFRCPRCQRL 279
>gi|296100497|ref|YP_003610643.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295054956|gb|ADF59694.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 269
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 129/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCR--VCGTPIIATKHAQRATFYCRQCQK 269
>gi|395228979|ref|ZP_10407297.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. A1]
gi|424732342|ref|ZP_18160920.1| phosphopantetheine adenylyltransferase [Citrobacter sp. L17]
gi|394717685|gb|EJF23369.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. A1]
gi|422893001|gb|EKU32850.1| phosphopantetheine adenylyltransferase [Citrobacter sp. L17]
Length = 269
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATV-RNGRLRWPVSEEIYRLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WVIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS++ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSQDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P +A G I RTT Y QK
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRAC--GAPIVATKHAQRTTFYCRRCQK 269
>gi|417788014|ref|ZP_12435697.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
NIAS840]
gi|334308191|gb|EGL99177.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
NIAS840]
Length = 276
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 26/287 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ + KKI + +I+ ++F + K I R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIIN--EETEFIEKLTNKTIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M G +++ + K+ + K++ + DG L
Sbjct: 59 YLLFRFSSDLTMISHLRMEGKYFVE---------PSTKEVE----KHTHVVFDFTDGTSL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +++LGP+ E V++F+ +L ++K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVKTGMEMQTAGLAKLGPEPKEETFIVEDFSKNLKRRKKAIKNALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------A 231
+ ++G+GN ADEVL+ +KIHP A L+KE L I + + A E G
Sbjct: 166 TIVAGLGNIYADEVLWMSKIHPETPANKLTKEEIEVLRDNIIKELALATEAGGTTIRSYT 225
Query: 232 DSSQFPSNWIF--HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
D+ + + F H+ ++ G I I G R T + P+ Q
Sbjct: 226 DAFRHSGGFQFSLHAYQRTGDPCERCGTPIQRIVVGQRGTHFCPKCQ 272
>gi|157693308|ref|YP_001487770.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus SAFR-032]
gi|157682066|gb|ABV63210.1| DNA-formamidopyrimidine glycosylase [Bacillus pumilus SAFR-032]
Length = 276
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ GK I I N + +F ++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRMVGETIQTIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + V + E K+ DG EL
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYRVHEAHEPYDKHVHVVFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LG + E T + + L K +K LLDQ
Sbjct: 107 RYHDVRKFGTMHLFQPGEEEKELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
+ G+GN DEVL+++ IHP A LS ESC L K I + ++ A++ G
Sbjct: 167 KIVVGLGNIYVDEVLFKSGIHPETKANQLSLESCKVLHKQIIDTLQVAVDAGGSTIRSYI 226
Query: 231 ---ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D F + + R +P + G I+ GGR T + QK
Sbjct: 227 NSQGDIGTFQLQLLVYDRRGEPCQTC--GSIIEKTVVGGRGTHFCVTCQK 274
>gi|392977007|ref|YP_006475595.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392322940|gb|AFM57893.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 269
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 129/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWAKELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCR--VCGTPIIATKHAQRATFYCRQCQK 269
>gi|41409092|ref|NP_961928.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|417749382|ref|ZP_12397782.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440778452|ref|ZP_20957210.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium avium subsp. paratuberculosis
S5]
gi|81700438|sp|Q73VL9.3|FPG_MYCPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|41397451|gb|AAS05311.1| Fpg [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336459094|gb|EGO38043.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436721102|gb|ELP45275.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium avium subsp. paratuberculosis
S5]
Length = 283
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + + V ++ R + LDDG
Sbjct: 61 KYLWLLLDGCDTALVVHLGMSGQMLLGAVPRAEHVRISAL---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + +P P++ L D L L +K IK
Sbjct: 106 VLSFADQRTFGGWMLADLLEVDGSILPRPVAHLARDPLDPRFDAAAVVKVLRRKHSEIKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ +SGIGN ADE L++AK+H + A +++ +L EV+ AL G S
Sbjct: 166 QLLDQQVVSGIGNIYADEALWRAKVHGARIAATMTGRQLTAVLDAAAEVMRDALAQGGTS 225
Query: 234 SQFPSNWI 241
F S ++
Sbjct: 226 --FDSLYV 231
>gi|198282763|ref|YP_002219084.1| DNA glycosylase/AP lyase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667882|ref|YP_002424959.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198247284|gb|ACH82877.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218520095|gb|ACK80681.1| formamidopyrimidine-DNA glycosylase, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 267
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 146/282 (51%), Gaps = 22/282 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
M ELPE+E R+ + + + K++ ++ A + DG D A++ G+AI HR
Sbjct: 1 MAELPEIELLRQKLRRNILHKRVGVMQMQNAKGEALPDGAGIKD--AALKGRAITDLHRY 58
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK-DTDEWPSKYSKFFVELDDG 117
G+ L+L LD + Q G G + +R V + E P + ++++
Sbjct: 59 GQYLFLELDRKDILALQLG--------GELSGELERGPVHGEGGEEPR--AALEIQINGQ 108
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALL---EPMTVDEFTDSLSKKKITIKAL 174
L F + ++R+L++ + V +++LGPD L+ E + + ++LS+++ ++ +
Sbjct: 109 QRLRFQGTQLGNRLRMLDENSDVDFLTKLGPDPLMVHGEGLGI--LREALSRRRSALRNI 166
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLD ++ GIG ADE+L+QA++ P +TA SLS+E L+ I +V+++A+ A ++
Sbjct: 167 LLDDTFAPGIGGIWADEILFQARLRPDRTATSLSEEERERFLEQIPKVLDRAVRCQAKTN 226
Query: 235 QFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
P ++ +R ++ G G ++ ++ GG+ P Q
Sbjct: 227 LLPKTFL--TRHREDGHCPSCGGALETLSVGGKNAMLCPACQ 266
>gi|220933505|ref|YP_002512404.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254789453|sp|B8GUQ6.1|FPG_THISH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|219994815|gb|ACL71417.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 271
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 32/290 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---IDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR IE H G++ V S+I + ++ + G A LG+ + R
Sbjct: 1 MPELPEVETTRRGIERHVTGRR-VTSVIVREPRLRWPVPGDLAERLTGHTLGRVL----R 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K L + +D+ GM+G++ V D K+ + LD G
Sbjct: 56 RAKYLLIEVDTGLL-LLHLGMSGSL-------------RVVTPDAPLRKHDHIDLCLDSG 101
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
L D RRF V + P P+ +ELGP+ L + D S K+++ IK ++
Sbjct: 102 RCLRLHDPRRFGAVLWIEGPAHAHPLLAELGPEPLGKDFDADYLFRSTRKRRVAIKQHIM 161
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
+ + G+GN A E L+ A I P + A L++ CA L++ I++V+ +A+ G + +
Sbjct: 162 NSHVVVGVGNIYASEALFLAGIRPGRAAGRLTRAECARLVETIRQVLGEAIAQGGTTLRD 221
Query: 236 FP----SNWIFHSREKKPGKAFVDGKKIDF----ITAGGRTTAYVPELQK 277
F S+ F + G+ + + I G R+T Y P Q+
Sbjct: 222 FVREDGSHGYFQQHLRVYGRTGLACMACETPVKQIVQGNRSTYYCPACQR 271
>gi|363542506|ref|ZP_09312089.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycoplasma ovipneumoniae SC01]
Length = 272
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 141/293 (48%), Gaps = 40/293 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKIV +++A D I +S +F+ + I+ + K
Sbjct: 1 MPELPEVVTVVNALKNEIIGKKIV-NVLAKDESFIKEISFVEFQKILKNSTIIDVQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF----FVELDD 116
++ LD+ M G + T ++P K++KF F+ D+
Sbjct: 60 HILFFLDNQKVLLSHLRMNGKYF----------------TYKYP-KWNKFDYISFIFSDN 102
Query: 117 GLELSFTDKRRFAK--VRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
+ L++ D R+F +R + V P+ +LGP+ + V++F + K +IK++
Sbjct: 103 SV-LNYNDSRKFGTFFIRDYFNLFKVKPLVDLGPEPFY--INVEDFYQKIKKSTRSIKSI 159
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS- 233
LLDQ +SG+GN ADEV + AKI P + A ++ E +++ KE+++K++E+G S
Sbjct: 160 LLDQKIMSGLGNIYADEVCFAAKISPDKIANQITLEQAKIIVEKSKEILQKSIELGGSSI 219
Query: 234 ----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+F + H+++ P KKI + GR T + P Q
Sbjct: 220 NSYTSLNAKEGKFQNFLKVHTKKNLPCTK--CNKKILKVVVAGRGTYFCPNCQ 270
>gi|54296585|ref|YP_122954.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila str.
Paris]
gi|397663125|ref|YP_006504663.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Legionella pneumophila subsp. pneumophila]
gi|81679547|sp|Q5X7I9.3|FPG_LEGPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|53750370|emb|CAH11764.1| hypothetical protein lpp0616 [Legionella pneumophila str. Paris]
gi|395126536|emb|CCD04719.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Legionella pneumophila subsp. pneumophila]
Length = 274
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ I+ H G+ I + + N+ + + GK I + R+GK
Sbjct: 1 MPELPEVETTKQGIKPHLEGRIITTAQV--RNRKLRLPVPLNLNELCEGKHITAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L +D + GM+G + I V+Q P K+ + +++GL L
Sbjct: 59 YILLHMDKG-YILIHLGMSGHLRI----VSQTAN---------PQKHDHVDLHINNGLAL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ +P P ++ LGP+ L + + + K +IK+ ++D
Sbjct: 105 RFCDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQ 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ GIGN A E L+ AKIHP +A ++ E +L IK+++E A+E G + +
Sbjct: 165 IVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLR---- 220
Query: 240 WIFHSREKKPGK--------------AFVDGKKIDFITAGGRTTAYVPELQKL 278
F+S + KPG V KI+ + GR +A+ P Q +
Sbjct: 221 -DFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPI 272
>gi|422006933|ref|ZP_16353921.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia rettgeri Dmel1]
gi|414098124|gb|EKT59774.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia rettgeri Dmel1]
Length = 269
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 137/292 (46%), Gaps = 38/292 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +I+ + S+ S+ +A+LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAIVRNGRL---RWPVSEQIKSLSDEAVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L + GM+G++ I T+E P K+ + + DG
Sbjct: 58 YLLIELQKG-WIIVHLGMSGSVRIL--------------TEELPEEKHDHVDLVMRDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF +D + ++ LGP+ L + + KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWCDDLENSSVLAHLGPEPLSDAFNPQYLYELAQKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ G+GN A+E L+ KI P + +L+ L+ IK+V+++++E G + +
Sbjct: 163 VVVGVGNIYANEALFATKISPEKITNTLTLAEITELVLQIKKVLQRSIEQGGTTLK---- 218
Query: 240 WIFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F + KPG + FV GKK I+ I G R+T + P+ QK
Sbjct: 219 -DFLQSDGKPGYFAQELFVYGKKGEPCSMCGTPIESIKQGQRSTFFCPQCQK 269
>gi|384431984|ref|YP_005641344.1| Formamidopyrimidine-DNA glycosylase [Thermus thermophilus
SG0.5JP17-16]
gi|333967452|gb|AEG34217.1| Formamidopyrimidine-DNA glycosylase [Thermus thermophilus
SG0.5JP17-16]
Length = 267
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 47/293 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ + + + D + + A G+ IL R+GK
Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQVVHHDPARYRNTALAE-------GRRILEVDRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ GMTG ++ P+ +++ + L+D L
Sbjct: 54 FLLFALEGGVELVAHLGMTGGFRLE------------------PTPHTRAALVLED-RTL 94
Query: 121 SFTDKRRFAKVRLLN----DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F D RRF RLL D +P + LGP+ L E F L + +KALLL
Sbjct: 95 YFHDPRRFG--RLLGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLL 152
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS--- 233
DQ +G+GN ADE L++A++ P + A SL++E L + ++EV+ +A+E+G +
Sbjct: 153 DQRLAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLHRALREVLAEAVELGGSTLSD 212
Query: 234 ----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F ++ + R+ P A G+ ++ GR T + P Q
Sbjct: 213 QSYRQPDGLPGGFQAHHAVYGRKGLPCPA--CGRPVERRVVAGRGTHFCPTCQ 263
>gi|269978188|ref|ZP_06185138.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1]
gi|269933697|gb|EEZ90281.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1]
Length = 306
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 127/312 (40%), Gaps = 65/312 (20%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--------------SDFEAS 46
MPELPEVE RR + H + N + VSA S F
Sbjct: 5 MPELPEVETIRRNLSSHLL------------NTCVTAVSAPTHPRSLRFQPGGFSRFHEL 52
Query: 47 VLGKAILSAHRKGKNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS 105
++GK + S R+GK LWL L F GM+G + R A D P
Sbjct: 53 LVGKRLESVSRRGKFLWLELSGNQTAWCFHLGMSGQL-----------RLAAGDITALPH 101
Query: 106 KYSKFFVELDDGLELSFTDKRRFA--KVRLLNDPTSVPP-------------ISELGPDA 150
+ +F LD+GLEL F D+R F +VR L T P + + D
Sbjct: 102 ERLRF--TLDNGLELVFCDQRTFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDV 159
Query: 151 LLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKE 210
L + V L + IK LLDQ+ +SGIGN ADE L+ A +HP A +LS E
Sbjct: 160 LDPNLDVSWVVSRLRSSRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLAKNLSGE 219
Query: 211 SCATLLKCIKEVIEKALEVGADS--SQFPSNWI----FHSREKKPGK----AFVDGKKID 260
LL+ V+ ALE G S + +W F S + G+ G+ +D
Sbjct: 220 DLRNLLEVAASVMRHALEFGGTSFDQLYVDSWGNPGDFASELQVYGRGGQACHQCGQALD 279
Query: 261 FITAGGRTTAYV 272
I GR T +
Sbjct: 280 KIVLDGRATVFC 291
>gi|392415757|ref|YP_006452362.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium chubuense
NBB4]
gi|390615533|gb|AFM16683.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium chubuense
NBB4]
Length = 283
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 106/239 (44%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH GK I + V +D A +L + R+G
Sbjct: 1 MPELPEVEVVRRGLNEHVTGKTITAVRVHHPRAVRRHEAGPADLAARLLDATVTGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + + V + R A LDDG
Sbjct: 61 KYLWLTLADGGALVVHLGMSGQMLLGPVPNENHLRIAAL---------------LDDGTT 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F + + D T VP P++ + D L D + L K IK
Sbjct: 106 LSFVDQRTFGGWLIADLVTVDGTDVPAPVAHIARDPLDPQFDRDRVVNVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L++AK++ + A LS+ A LL V+ AL G S
Sbjct: 166 LLDQTVVSGIGNIYADEALWRAKVNGARLASGLSRPKLAELLDAAAVVMTDALGQGGTS 224
>gi|386715048|ref|YP_006181371.1| formamidopyrimidine-DNA glycosylase [Halobacillus halophilus DSM
2266]
gi|384074604|emb|CCG46097.1| formamidopyrimidine-DNA glycosylase [Halobacillus halophilus DSM
2266]
Length = 278
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++ + K I + N + + +F+ + G++ L RKGK
Sbjct: 1 MPELPEVETVRQTLKNLVLKKTIDDVSVYWGNIIKNPRDPDEFKRLLKGQSFLDIERKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +D S M G + + D + K++ DG EL
Sbjct: 61 FMIFHMDDLVLVS-HLRMEG-------------KFGLYDAEVEKPKHTHVVFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + P+++LGPD + T+D F L + IKA+LLDQ
Sbjct: 107 RYDDVRKFGTMHVFPKGEELDRKPLNQLGPDPFDKAFTLDYFFHKLQRTSRNIKAVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
S ++G+GN DE LY+A+IHP + A L KE + K ++IE+A+ +G +
Sbjct: 167 SIVAGLGNIYVDEALYRARIHPERLANKLLKEEADRIRKSSVQIIEEAIGLGGST 221
>gi|336325850|ref|YP_004605816.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium resistens DSM
45100]
gi|336101832|gb|AEI09652.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium resistens DSM
45100]
Length = 297
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 142/313 (45%), Gaps = 52/313 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H +G++ S+ + + G F + + I S R+GK
Sbjct: 1 MPELPEVEVVRRGLESHILGRRF-ASVEVFHPRAVRGFDPVSFSSLLDATRIRSVDRRGK 59
Query: 61 NLWLRLDSPPFPSFQ-----FGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
LW+ ++ S Q GM+G + + ++T K+ +
Sbjct: 60 YLWMVVEGDSGASEQALFVHLGMSGQMLVN------------RETQPV-GKHERIRATFT 106
Query: 116 DGLELSFTDKR---RFAKVRLLNDPT-SVPPIS--ELGPDAL----LEPM---------T 156
DG LSF D+R R+A + L+ DP +V I L P+A+ ++P+
Sbjct: 107 DGSVLSFVDQRTFGRWAMMSLVPDPHGTVDAIGGPRLIPEAVAHVAMDPLETAFTEDDRH 166
Query: 157 VDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLL 216
+D + K IK +LLDQ+ I+GIGN ADE L+ A I P + A LS+ + ++
Sbjct: 167 LDNTITRIKAKNSEIKRVLLDQTVIAGIGNIYADEALFAAGIRPRRRASGLSRPAIRRII 226
Query: 217 KCIKEVIEKALE------------VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITA 264
+ V+ +AL+ V S F + + RE KP K V G I +
Sbjct: 227 GHARAVMLRALDEGGTSFDSLYVNVNGSSGYFSRSLQVYGREGKPCK--VCGTPIKRVQF 284
Query: 265 GGRTTAYVPELQK 277
GGR++ Y P Q+
Sbjct: 285 GGRSSHYCPVCQR 297
>gi|223932651|ref|ZP_03624650.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591]
gi|386583670|ref|YP_006080073.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis D9]
gi|223898621|gb|EEF64983.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591]
gi|353735816|gb|AER16825.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis D9]
Length = 297
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 23 LPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 80
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWPS-KYSKFFVELDD 116
L IY+ + + R K D+ P+ K+ F D
Sbjct: 81 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSD 122
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++EF L+K + IK+
Sbjct: 123 GSTLVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSH 182
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS ++G+GN DEVL++AK+HP QT+ LS E A L + EV++ +E G +
Sbjct: 183 LLDQSLVAGLGNIYVDEVLFKAKVHPAQTSNQLSAEQVADLRQATIEVLQLGIEKGGSTI 242
Query: 235 QFPSNWI--------FHSREKKPGKAFVDGK-KIDFITAGGRTTAYVPELQKLNG 280
+ N + + K G+A + +I I GGR T + P+ Q +G
Sbjct: 243 RTYKNALGMDGTMQDYLQVYGKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKHG 297
>gi|308174602|ref|YP_003921307.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM
7]
gi|384165376|ref|YP_005546755.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
LL3]
gi|384169518|ref|YP_005550896.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
XH7]
gi|307607466|emb|CBI43837.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM
7]
gi|328912931|gb|AEB64527.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
LL3]
gi|341828797|gb|AEK90048.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens
XH7]
Length = 278
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 125/288 (43%), Gaps = 25/288 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I + I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + DE K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQADEPDDKHVHVVFNMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ G+GN DE L++A IHP A SLS L IK+ +++A++ G + +
Sbjct: 169 KAVVGLGNIYVDEALFRAGIHPETKANSLSDGQIKKLHTEIKDTLQEAIDAGGSTVRSYI 228
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N +F R GK G I I GGR T + QK
Sbjct: 229 NSQGEIGMFQLRHYVYGKKDEPCKTCGTMISKIVVGGRGTHFCARCQK 276
>gi|422416067|ref|ZP_16493024.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023]
gi|313623617|gb|EFR93781.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023]
Length = 273
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D ++ +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENDEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFKAKVRPERAANSLSDKEINRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ + GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTGEPCVVCGTPIEKMKLNGRGTHFCPHCQK 273
>gi|237728932|ref|ZP_04559413.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2]
gi|226909554|gb|EEH95472.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2]
Length = 269
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 131/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ + + + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLEL-ADGWIIIHLGMSGSLRIL--------------PEELPADKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDDFNANYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + SLSK+ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLTSSLSKDECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P +A G I RTT Y QK
Sbjct: 223 SDGKPGYFAQELQVYGREGEPCRAC--GAPIVATKHAQRTTFYCRRCQK 269
>gi|407796041|ref|ZP_11142997.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salimicrobium sp. MJ3]
gi|407019395|gb|EKE32111.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Salimicrobium sp. MJ3]
Length = 274
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 17/260 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+A ++++ + GK+I + + + V FE + G+ + S RKGK
Sbjct: 1 MPELPEVDAVKQSLLKQVTGKRISRVEVFWPSIVKVPEDRKQFEEMLQGQELQSVDRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD S M G +I+ + +E K++ +DG L
Sbjct: 61 FLILHLDDYSLVS-HLRMEGKYFIR-------------NGEEPKDKHTHIIFTFEDGSSL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + + P++ LGPD + T + + L + IK +LLDQ
Sbjct: 107 HYNDVRKFGTMHLFDKGEEYNNKPLNTLGPDPIEGRFTTEYMYEQLQRTTRRIKTILLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
S ++G GN DE L++A +HP + SL +E+ +++ ++VI +A+E G + + S
Sbjct: 167 SVVAGFGNIYVDETLFRAGVHPERLGSSLDRETVKRIVEEGEKVIREAMEAGGSTIRSYS 226
Query: 239 NWIFHSREKKPGKAFVDGKK 258
SR + K FV GK+
Sbjct: 227 RSD-GSRGEYQTKLFVYGKE 245
>gi|397666232|ref|YP_006507769.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Legionella pneumophila subsp. pneumophila]
gi|395129643|emb|CCD07876.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Legionella pneumophila subsp. pneumophila]
Length = 274
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ I+ H + +++ ++ + K+ V + GK I + R+GK
Sbjct: 1 MPELPEVETTKQGIKPH-LESRMITTVQVRNRKLRLPVPL-NLNELCQGKHITAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + GM+G + I V T P K+ + +++GL L
Sbjct: 59 YILLHLDKG-YLLIHLGMSGHLRI------------VSQTAN-PQKHDHVDLHINNGLAL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ +P P ++ LGP+ L + + + K +IK+ ++D
Sbjct: 105 RFCDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQ 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ GIGN A E L+ AKIHP +A ++ E +L IK+++E A+E G + +
Sbjct: 165 IVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLR---- 220
Query: 240 WIFHSREKKPGK--------------AFVDGKKIDFITAGGRTTAYVPELQKL 278
F+S + KPG V KI+ + GR +A+ P Q +
Sbjct: 221 -DFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPI 272
>gi|331266547|ref|YP_004326177.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis Uo5]
gi|326683219|emb|CBZ00837.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis Uo5]
Length = 274
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI IA + +F+ V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMI--KTDLDEFQREVPGQVIESVGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L + S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTNKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPKEQDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAAEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQACSRCGTLIEKFQLGGRGTHFCPQCQR 272
>gi|451343315|ref|ZP_21912388.1| formamidopyrimidine-DNA glycosylase [Eggerthia catenaformis OT 569
= DSM 20559]
gi|449337895|gb|EMD17050.1| formamidopyrimidine-DNA glycosylase [Eggerthia catenaformis OT 569
= DSM 20559]
Length = 270
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKS------IIADDNKVIDGVSASDFEASVLGKAILS 54
MPELPEVE R+ ++ + KKI+ + II D+ ++ F+ +V K IL
Sbjct: 1 MPELPEVETVRQTLKHFVLNKKIISADLRYPKIIEDEPEI--------FKQAVSNKKILD 52
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R GK L L+ M G + +K TD + K+
Sbjct: 53 IDRMGKYLIFLLEEQTVFIAHLRMEG-------------KFNIKSTDTFYQKHDHIIFHF 99
Query: 115 DDGLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DDG ++ + D R+F +++L+ + PP+S+LG + +T +E + + +K
Sbjct: 100 DDGTDMRYNDTRKFGRMKLVGMNYVDEPPLSQLGKEPF--DITEEELYRKIHHSSLAVKT 157
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+LLDQ +SGIGN A+E+ + KI P A LSK+ L++ V+++A++ G +
Sbjct: 158 VLLDQHIMSGIGNIYANEICFHMKIDPRTKASRLSKKRTRELIEISVSVLKEAIKQGGTT 217
Query: 234 SQ-FPSNWI---FHSREKKPGK--AFVDGKKIDFITAGGRTTAYVPELQK 277
F +N I F + G+ V I I GR T + P QK
Sbjct: 218 IHSFDANGIHGLFQVKLSVHGQKNCTVCKNSIKKIMLNGRGTYFCPFCQK 267
>gi|297181411|gb|ADI17600.1| formamidopyrimidine-DNA glycosylase [uncultured delta
proteobacterium HF0130_19C20]
Length = 272
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 27/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + +G I I +N ++ G F+ ++G+ R+ K
Sbjct: 1 MPELPEVETVVRELSNEILGDSISSVDIFRNNPIVQG-DLEAFQKQLIGRKFKYVTRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L F MTG + V D + PSKY++ + L G +
Sbjct: 60 YLIFHLHPHGFMVAHMRMTG-------------KFIVCDPIDMPSKYNRVWFHLKSGRLM 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R F + + + + +++LG + E + V+ F +S K IK++LLDQ
Sbjct: 107 IFDDVRCFGTLEVYENLSDSKALNKLGIEPFSEDLNVNYFKSKVSSSKREIKSILLDQKI 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-----------V 229
I+G+GN E+L+++KI PL+T+ ++ + + ++K + V+E+A+E V
Sbjct: 167 IAGLGNIYVSEILFRSKISPLRTSETIRNKEWSQIIKYTQSVLEEAIENNGTTISNFRRV 226
Query: 230 GADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ +F + + +KP G I I R+T + PE Q+
Sbjct: 227 DEKTGKFQKFLKVYDKTEKPCPD--CGIPIQRIVQQQRSTFFCPECQQ 272
>gi|85706182|ref|ZP_01037277.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217]
gi|85669346|gb|EAQ24212.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217]
Length = 283
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I ++ + + + + A + G+ +L+ R+ K
Sbjct: 1 MPELPEVETVRRGLAPIMEGQVIARATV--NRPDLRWPFPPEMSARLTGQRVLALRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S GM+G + I G + Q+ + P K+ +++ G +
Sbjct: 59 YLLADLASGETLLIHLGMSGRMLISGDPLGQFVHA-----HPAPEKHDHVVLDMAGGARI 113
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+F D RRF + L+ T S P ++ +GP+ L T +L + IK+ LLDQ
Sbjct: 114 TFNDPRRFGAMDLMPTTTAESHPLLARIGPEPLGNDFNELYLTAALKGRNTPIKSALLDQ 173
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
++G+GN E LY+A I PL A +LS + A+L+ I++V+ A+ G S +
Sbjct: 174 RIVAGLGNIYVCETLYRAGISPLTRAGTLSAKRAASLVPIIRDVLRDAITAGGSSLRDFR 233
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE + I + GR++ Y P+ Q+
Sbjct: 234 QTDGELGYFQHSFDVYGREGDLCRNSGCTGLITRVIQAGRSSFYCPKCQR 283
>gi|415884120|ref|ZP_11546149.1| formamidopyrimidine-DNA glycosylase [Bacillus methanolicus MGA3]
gi|387591915|gb|EIJ84232.1| formamidopyrimidine-DNA glycosylase [Bacillus methanolicus MGA3]
Length = 274
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + K+I + + + F+ +++G+ I+ R+GK
Sbjct: 1 MPELPEVETIRRTLIKLVLHKQIDRVSVFWPKMIKHPEEVEQFKDALIGQTIVQISRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L F + + + + ++G R + ++ K++ DG EL
Sbjct: 61 LLI-------FYTNDYALVSHLRMEG-------RYTLFSKNDPVEKHTHVIFHFSDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L T PP+++LGP+ + T+ ++ L K +K LLDQ
Sbjct: 107 RYKDVRKFGTMHLYKKGTEFQYPPLNQLGPEPFSDSFTIGSLSEKLKKTNRKVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ G+GN DE L++AKIHP + A SL+ E L + I E + +A+ G + +
Sbjct: 167 KIVVGLGNIYVDEALFRAKIHPERIANSLTDEEIERLHREIIETLSEAVSKGGSTVRSYV 226
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE + K + G ++ GGR T Y QK
Sbjct: 227 NSQGQIGMFQLEHFVYGREGEVCK--ICGSPLEKSVVGGRGTHYCANCQK 274
>gi|385261380|ref|ZP_10039505.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. SK140]
gi|385188382|gb|EIF35868.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. SK140]
Length = 274
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 134/288 (46%), Gaps = 27/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I +F+ V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSIEIRYPKMIK-TDLDEFQNEVPGQEIQSMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S M G + V + K+ F++ +DG L
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYYPTNVPE-------------RKHDHIFIQFEDGGTL 104
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + LL + +LGP+ + + F +L + K IK+ LLDQ
Sbjct: 105 VYEDLRKFGTMELLAPELLDAYFASKKLGPEPTEQDFDLGRFKRALKRSKKPIKSHLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ ++G+GN DEVL++AK+HP + + SL+ + + +V+ KA+E G + + +
Sbjct: 165 TLVAGLGNIYVDEVLWRAKVHPSRLSNSLTAQEARKVHDETIKVLGKAVEKGGSTIRTYT 224
Query: 239 NWI--------FHSREKKPGKAF-VDGKKIDFITAGGRTTAYVPELQK 277
N FH K G++ G I+ GGR T + P Q+
Sbjct: 225 NAFGEDGTMQEFHQVYDKTGQSCSCCGTVIEKFQLGGRGTHFCPNCQR 272
>gi|383815761|ref|ZP_09971169.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Serratia sp. M24T3]
gi|383295339|gb|EIC83665.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Serratia sp. M24T3]
Length = 269
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 135/288 (46%), Gaps = 30/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE + +G KI+ +++ ++++ VS S + ++S R+ K
Sbjct: 1 MPELPEVETSRRGIEPYLVGHKIMHAVV-RNSRLRWPVSQEIMSLS--DQVVISVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + + GM+G++ R ++T+ P+K+ + +D G L
Sbjct: 58 YLLVELKTG-WIIIHLGMSGSL-----------RVLAEETE--PAKHDHVDLVMDTGFVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF D +S LGP+ L E + D KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTQDLEGSSVLSHLGPEPLSEDFHAEYLRDKSQKKKSPIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ----- 235
+ G+GN A E L+ A I P + A SLS E A L+ IK V+ +++E G + +
Sbjct: 164 VVGVGNIYASESLFVAGISPDRPANSLSLEEYALLVATIKAVLLRSIEQGGTTLRDFLQS 223
Query: 236 ------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R+T + P Q+
Sbjct: 224 DGKPGYFAQELQVYGRDGEPCR--VCGTPIQSSKHAQRSTFFCPNCQR 269
>gi|367468265|ref|ZP_09468148.1| Formamidopyrimidine-DNA glycosylase [Patulibacter sp. I11]
gi|365816669|gb|EHN11684.1| Formamidopyrimidine-DNA glycosylase [Patulibacter sp. I11]
Length = 281
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 29/265 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G+ I SI DD + S ++ EA++ G+ I+ R+GK
Sbjct: 1 MPELPEVETIRRQLVPLVAGRTIA-SIAIDDPRWCAPQSVAEVEAALTGRRIVGIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ R D + MTG + + D D + Y + + LDD +
Sbjct: 60 HMLWRTDGGTV-AMHLRMTGVLLVDAA-----------DDD---APYERVRIVLDDERTV 104
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF R D LGP+ L + +L ++ IK LLLDQ
Sbjct: 105 RFCDPRRFGTGRWFAAADDADRWIDERLGPEPLGDDFDGPALRAALRGRRAPIKGLLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++G+GN ADE L+ A++HPL+ L+ CA L ++ + + G +
Sbjct: 165 RVVAGVGNIYADEALFHARVHPLRAGGQLTATQCAALADGVRLALADGIASGGATIDDFR 224
Query: 234 ------SQFPSNWIFHSREKKPGKA 252
F +++ H RE +P A
Sbjct: 225 HVDGVEGWFQNDFRVHRREGQPCPA 249
>gi|440285591|ref|YP_007338356.1| formamidopyrimidine-DNA glycosylase Fpg [Enterobacteriaceae
bacterium strain FGI 57]
gi|440045113|gb|AGB76171.1| formamidopyrimidine-DNA glycosylase Fpg [Enterobacteriaceae
bacterium strain FGI 57]
Length = 269
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 128/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +II + SD + K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATIQYAIIRNGRL---RWPVSDEIHRLSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNAEYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + CA L+ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSPQECALLVSTIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCR--VCGTPIIATKHAQRATFYCRQCQK 269
>gi|260907270|ref|ZP_05915592.1| Formamidopyrimidine-DNA glycosylase [Brevibacterium linens BL2]
Length = 307
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 134/304 (44%), Gaps = 29/304 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIAD-------DNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE+ R + E G I + + D + ID + F A+V G+ I+
Sbjct: 1 MPELPEVESVRVGVHEWTAGTTITGAEVIDPRILGTTSQRRIDASAVDGFIAAVTGRRII 60
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
+A R+GK +WL L V + + V D + ++++ +
Sbjct: 61 AAERRGKFMWLTLGEDLGAGPAAEPAAPELSLLVHLGMSGQLRVHDAADEIHRHTRAILR 120
Query: 114 LDDG---LELSFTDKRRFAKVR---LLNDPTSVPPIS--ELGPDALLEPMTVDEFTDSLS 165
L+ G L+L F D+R F + L++ + P S + D L + L+
Sbjct: 121 LERGSESLQLRFIDQRIFGHLGVQPLVHAYGRLVPASANHIAADPLEPAFEPGLALEQLA 180
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
+K+ +K+ LLDQS +SGIGN ADE L++A IHPL K A +L V+
Sbjct: 181 RKRTVVKSALLDQSLVSGIGNIYADEALFRAGIHPLAIPARTRKSRLAAVLDSATRVMSD 240
Query: 226 ALEVG------------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVP 273
AL VG +S F + + R + + G +I+ +T GGR + + P
Sbjct: 241 ALAVGGTSFDALYVNVNGESGYFDRALLVYGRGGQ--ECVRCGTEIEKMTIGGRGSHFCP 298
Query: 274 ELQK 277
QK
Sbjct: 299 NCQK 302
>gi|417810604|ref|ZP_12457283.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
GJ-24]
gi|335349400|gb|EGM50900.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
GJ-24]
Length = 276
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 134/287 (46%), Gaps = 26/287 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ + KKI + +I+ ++F + K I R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIIN--EETEFIEKLTNKTIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M G +++ + K+ + K++ + DG L
Sbjct: 59 YLLFRFSSDLTMISHLRMEGKYFVE---------PSTKEVE----KHTHVVFDFTDGTSL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +++LGP+ E +++F+ +L ++K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVKTGMEMQTAGLAKLGPEPKEETFIIEDFSKNLKRRKKAIKNALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------A 231
+ ++G+GN ADEVL+ +KIHP A L+KE L I + + A E G
Sbjct: 166 TIVAGLGNIYADEVLWMSKIHPETPANKLTKEEIEVLRDNIIKELALATEAGGTTIRSYT 225
Query: 232 DSSQFPSNWIF--HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
D+ + + F H+ ++ G I I G R T + P+ Q
Sbjct: 226 DAFRHSGGFQFSLHAYQRTGDPCERCGTPIQRIVVGQRGTHFCPKCQ 272
>gi|400537018|ref|ZP_10800552.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium colombiense CECT 3035]
gi|400330031|gb|EJO87530.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium colombiense CECT 3035]
Length = 289
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 114/254 (44%), Gaps = 30/254 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK + + V + +D +L I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTMTAVRVHHPRAVRRHEAGPADLTVRLLNARITGTDRRG 60
Query: 60 KNLWLRLDSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
K LWL LD+ P GM+G + + V + R +
Sbjct: 61 KYLWLLLDTEPAGQESDTALVVHLGMSGQMLLGEVPRADHVRISAL-------------- 106
Query: 113 ELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKK 167
LDDG LSF D+R F L + D + VP P++ L D L D L +K
Sbjct: 107 -LDDGTVLSFADQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRK 165
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
IK LLDQ +SGIGN ADE L++AK++ + A +LS++ +L EV+ AL
Sbjct: 166 HSEIKRQLLDQQVVSGIGNIYADEALWRAKVNGARIADTLSRKQLTAVLDAAAEVMRDAL 225
Query: 228 EVGADSSQFPSNWI 241
G S F S ++
Sbjct: 226 AQGGTS--FDSLYV 237
>gi|317125434|ref|YP_004099546.1| bifunctional DNA-(apurinic or apyrimidinic site)
lyase/formamidopyrimidine-DNA glycosylase
[Intrasporangium calvum DSM 43043]
gi|315589522|gb|ADU48819.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA
glycosylase [Intrasporangium calvum DSM 43043]
Length = 292
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 108/236 (45%), Gaps = 15/236 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H +G+ I ++ I V+ D V G + +A R+G
Sbjct: 1 MPELPEVEVVRRGLLDHVVGRHITRAAITGLRVARRHVAGPEDLADRVSGTTVTAASRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + +K + K F DDG +
Sbjct: 61 KYLWLVLDGDEALIIHLGMSGQMLVKPADAPREKHCHAA------------FDFADDGPQ 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D+R F + L T P + + PD + ++ +K LLD
Sbjct: 109 LRFVDQRTFGGLALSPLGTDGIPDAVRHIAPDPFEPVFDQVSVVRRMKARESAVKRALLD 168
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
QS +SGIGN ADE L++A++H + SL+K + +L +EV+ +AL G S
Sbjct: 169 QSLVSGIGNIYADEALWRARVHGERVCASLTKPVLSRVLDHAREVMAEALTQGGTS 224
>gi|229820102|ref|YP_002881628.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM
12333]
gi|229566015|gb|ACQ79866.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM
12333]
Length = 310
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 52/262 (19%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK----------VIDGVSASDFEASVLGK 50
MPELPEVE R + H +G++IV+ +A + ++D + + F A+V
Sbjct: 1 MPELPEVETVRAGLAAHALGRRIVRVDVAGERTTRRQAGGALALVDALEGASFTAAV--- 57
Query: 51 AILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
R+GK WL LD+ GM+G + ++G A +D + P
Sbjct: 58 ------RRGKFCWLTLDTGRALLVHLGMSGQLLVRG---------AGQDAQDDPRHLRAR 102
Query: 111 FVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDA------------------LL 152
DDG EL F D+R F + + + P ++ GP LL
Sbjct: 103 IRFADDG-ELLFIDQRTFGYL----TSSDLVPTADGGPGGFGSDDPRLPLEVAGIARDLL 157
Query: 153 EP-MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKES 211
+P + +DE ++ ++ +K LLDQS +SG+GN ADE L++A++HP + L + +
Sbjct: 158 DPALRIDELVTAVRTRRSAVKRALLDQSLVSGVGNIYADEALWRARVHPERATRGLPRLA 217
Query: 212 CATLLKCIKEVIEKALEVGADS 233
++L+ V++ AL G S
Sbjct: 218 VRSVLESAAGVMQDALAQGGTS 239
>gi|428768640|ref|YP_007160430.1| DNA-(apurinic or apyrimidinic site) lyase [Cyanobacterium aponinum
PCC 10605]
gi|428682919|gb|AFZ52386.1| DNA-(apurinic or apyrimidinic site) lyase [Cyanobacterium aponinum
PCC 10605]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 131/293 (44%), Gaps = 33/293 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + G I+ + + V S S F V + IL HR+GK
Sbjct: 1 MPELPEVETVCRGLNYVTSGLVIMGADVLLSRSVAFPDSDSTFVQEVKSQKILQWHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L +L S + MTG +++K +D+ +FF D E
Sbjct: 61 YLLAQL-SEGYLGVHLRMTGQLLWVK------------QDSPLQKHTRVRFF--FADNQE 105
Query: 120 LSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L F D R F KV L+N + + + +LG + +V F D L + + IK +L
Sbjct: 106 LRFVDTRTFGKVWLVNQDVAPDSIITGLQKLGYEPFDAQFSVTYFQDKLKRCRRPIKTVL 165
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-S 234
LDQ ++GIGN ADE L+ + IHP A LS L I EV+E A+ G + S
Sbjct: 166 LDQGIVAGIGNIYADEALFVSNIHPQTLACDLSSSQIERLHSAILEVLETAIASGGTTFS 225
Query: 235 QFPSNWIFHSREKKPGKAFVDGKK----------IDFITAGGRTTAYVPELQK 277
F I GKA+V G+K I+ I GGR++ + P+ QK
Sbjct: 226 DFLH--ITGVNGNYGGKAWVYGRKGQPCRICSNIIEKIKLGGRSSHFCPQCQK 276
>gi|373464489|ref|ZP_09556027.1| DNA-formamidopyrimidine glycosylase [Lactobacillus kisonensis
F0435]
gi|371762410|gb|EHO50941.1| DNA-formamidopyrimidine glycosylase [Lactobacillus kisonensis
F0435]
Length = 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 38/297 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E +G KI K++ K I + +DFE ++ K I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVVGSKI-KAVDVLYEK-IGNLPKADFEQALRNKIIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVK---DTDEWP-SKYSKFFVELDD 116
L +R+ G+ + + R K + D P K++ L D
Sbjct: 59 YLLIRISG-----------------GLTIVSHLRMEGKYDVEPDGVPIGKHTHVIFYLTD 101
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G EL + D R+F ++ L++ +V + +GP+ +T+D +K K +K
Sbjct: 102 GRELRYNDSRKFGRMNLVDTGQEMTVAGLKTIGPEPTDHDLTIDYMKTIFAKSKKMVKPF 161
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL------- 227
LLDQS I+G+GN ADEVL+ +KIHP Q ++ + L I I+KA+
Sbjct: 162 LLDQSKIAGLGNIYADEVLWLSKIHPEQPVNLITADEIERLRHNIITEIQKAIAGHGTTV 221
Query: 228 ----EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
++ +F ++ + R+ +P G I I R T + P Q ++G
Sbjct: 222 HSYSNAYGEAGEFQNHLNVYGRKGEP--CLRCGTPIVKIKLAQRGTHFCPHCQVVHG 276
>gi|23099617|ref|NP_693083.1| formamidopyrimidine-DNA glycosylase [Oceanobacillus iheyensis
HTE831]
gi|29611715|sp|Q8EPE6.3|FPG_OCEIH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|22777847|dbj|BAC14118.1| formamidopyrimidine-DNA glycosidase [Oceanobacillus iheyensis
HTE831]
Length = 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + ++ K I I N + +F+A V G+ I S RKGK
Sbjct: 1 MPELPEVETIKETLKLFVCNKTIKHIDIEWPNMIKHPDDVEEFKALVTGQTIRSMGRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD ++ + + ++G + +V + K++ +G EL
Sbjct: 61 FLLFYLD-------EYVLISHLRMEG-------KYSVHSPGDPVKKHTHVTFYFSNGEEL 106
Query: 121 SFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + + P+++LGPD ++ F + L + IK LLDQ
Sbjct: 107 RYNDVRKFGTMHVYPIGEEFMHKPLNQLGPDPFDTSFNLEYFYEKLKRTDRYIKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
S ++G+GN DE L++A +HPL+ LSK+ L KE + A++ G
Sbjct: 167 SIVTGLGNIYVDETLFRANVHPLKRCSKLSKQEVKKLQINAKETLRDAIKAGGTTIRSYV 226
Query: 231 ---ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
D F + + + KP + V G I I GGR T P Q
Sbjct: 227 NTQGDMGMFQQDLYVYGQHSKPCR--VCGADIIKIKVGGRGTHLCPTCQ 273
>gi|422021193|ref|ZP_16367706.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia sneebia DSM 19967]
gi|414099662|gb|EKT61301.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Providencia sneebia DSM 19967]
Length = 271
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 38/294 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I +++ +D S+ + + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNTIQYAVVRNDRL---RWPVSEQIKRLSDEVILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L + + GM+G++ I +E P K+ + + DG
Sbjct: 58 YLLIELKTG-WIIIHLGMSGSLRIL--------------REELPEEKHDHVDLVMRDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF +D + ++ LGP+ L + D +++KI IK L+D
Sbjct: 103 LRYTDPRRFGAWLWCDDLKTSSVLAHLGPEPLSDEFNAQYLFDQAARRKIAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ G+GN A+E L+ I P + +L+ + L+K IK+V+++++E G + +
Sbjct: 163 VVVGVGNIYANEALFVTGISPEKMTNTLTFDQATELVKQIKKVLKRSIEQGGTTLK---- 218
Query: 240 WIFHSREKKPG----KAFVDGKK----------IDFITAGGRTTAYVPELQKLN 279
F + KPG + FV GKK I I G R+T + P+ QK++
Sbjct: 219 -DFLQSDGKPGYFAQELFVYGKKGEACAICGSLIVSIKQGQRSTFFCPQCQKID 271
>gi|451947375|ref|YP_007467970.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfocapsa sulfexigens
DSM 10523]
gi|451906723|gb|AGF78317.1| formamidopyrimidine-DNA glycosylase Fpg [Desulfocapsa sulfexigens
DSM 10523]
Length = 284
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 33/296 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + + H +G+ IV I ++ V + ++ + GK I R+ K
Sbjct: 1 MPELPEVEVICQGLLPHLLGRTIV-DIRCSGKQLRYPVLCREMQSELCGKQITGLQRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + GMTG + + DT K+ +LD+G EL
Sbjct: 60 YLILWTNEGGTIIIHLGMTGNM-------------GIFDTGSATKKHDHVCWQLDNGKEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPP----ISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F D RRF V LL + S GP+ ++ + ++++I IK ++
Sbjct: 107 RFNDARRFGAVHLLPGRRAKAAEKQFFSATGPEPFSRSCSISYLAELAARRRIGIKKFIM 166
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS--- 233
D I+GIGN A+E L++A IHP A SLS + L I++ + A++ G +
Sbjct: 167 DSHVIAGIGNIYANESLFRASIHPECLASSLSLKDWKRLRAIIRKTLNHAIQCGGSTISD 226
Query: 234 --------SQFPSNWIFHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQKLNG 280
F N++ + K G+A G I T GGR + + P Q + G
Sbjct: 227 FVNASGKGGYFQMNFLVYG---KAGEACSRCGVTIQKETIGGRASFFCPACQSIQG 279
>gi|386759472|ref|YP_006232688.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. JS]
gi|384932754|gb|AFI29432.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. JS]
Length = 277
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I I N + +F ++ G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G +Y K+ D+ K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG----KYGLHQAKEPDD---KHVHVIFTMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A +HP A LS ++ TL IK +++A++ G +
Sbjct: 169 KTVVGLGNIYVDEALFRAGVHPETKANQLSDQTIKTLHAEIKNTLQEAIDAGGSTVRSYI 228
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ KP K G I I GGR T + QK
Sbjct: 229 NSQGEIGMFQLQHFVYGKKDKPCKNC--GTMISKIVVGGRGTHFCARCQK 276
>gi|383458443|ref|YP_005372432.1| formamidopyrimidine-DNA glycosylase [Corallococcus coralloides DSM
2259]
gi|380733540|gb|AFE09542.1| formamidopyrimidine-DNA glycosylase [Corallococcus coralloides DSM
2259]
Length = 300
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 24/288 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARR +E G +IV++ AD +V G F + L + + RKGK
Sbjct: 1 MPELPEVEIARRNLERWFKGHRIVRAE-ADATRVFRGAELPHF--TRLTGRVTALERKGK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L+ GMTG V+ + P YS+ L+DG +
Sbjct: 58 YLLITLEGGHGLMAHLGMTGKF--------------VRRKEGEPVPYSRARFHLEDGHVV 103
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F+D R F ++ + + +P + LG D L E +T + +++ K +K L+DQ
Sbjct: 104 HFSDPRLFGRMEPVPAKELWELPAVKALGIDPLTEGLTGPQLQEAVGDSKQDLKVALMDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL--EVGADSSQF 236
++G+GN A E L++A +HP + +L+ + L + I + A + G D +
Sbjct: 164 GRVAGLGNIHAAEALFRAGLHPARKPGTLTPDDWKHLARAIHAAFDFAFKEQEGEDITYL 223
Query: 237 P---SNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGV 281
S F + G G ++ T GGRTT + P+ Q L+ V
Sbjct: 224 EEAGSVNRFRVYGRAEGPCSKCGTTVESFTQGGRTTHFCPKCQPLSTV 271
>gi|225181343|ref|ZP_03734787.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT
1]
gi|225167924|gb|EEG76731.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT
1]
Length = 274
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ G+ I + D +A+D + GK + R+GK
Sbjct: 1 MPELPEVETIRCGLEQVLPGRVFAAVEIGYGGSIKDP-AAADVMTRLPGKRVTGTGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + LD MTG ++ +G AVT K++ DG
Sbjct: 60 YLQIFLDDDSVLVIHLRMTGQLVFNEGAAVT--------------DKHTHVVFSFTDGST 105
Query: 120 LSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L+F+D R+F + + P S + ++ LGP+ L + K+ +TIKALL
Sbjct: 106 LAFSDIRKFGTIWWV--PISRLDHIKGLATLGPEPLSADFHFSYLNREVEKRTVTIKALL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
L+Q +++G+GN ADE+L++A+I P + A SLS++ L I+EV+ +A+E S
Sbjct: 164 LNQQFLAGLGNIYADEILHRAQILPQRKARSLSRQERQHLFSAIREVLAEAIECRGTS 221
>gi|13096238|pdb|1EE8|A Chain A, Crystal Structure Of Mutm (Fpg) Protein From Thermus
Thermophilus Hb8
gi|13096239|pdb|1EE8|B Chain B, Crystal Structure Of Mutm (Fpg) Protein From Thermus
Thermophilus Hb8
Length = 266
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 43/290 (14%)
Query: 2 PELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKN 61
PELPEVE RR + +G+ + + + D + + A G+ IL R+GK
Sbjct: 1 PELPEVETTRRRLRPLVLGQTLRQVVHRDPARYRNTALAE-------GRRILEVDRRGKF 53
Query: 62 LWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELS 121
L L+ GMTG ++ T + R+A+ + +G L
Sbjct: 54 LLFALEGGVELVAHLGMTGGFRLE---PTPHTRAAL----------------VLEGRTLY 94
Query: 122 FTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ + D +P + LGP+ L E F L + +KALLLDQ
Sbjct: 95 FHDPRRFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQR 154
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+G+GN ADE L++A++ P + A SL++E L + ++EV+ +A+E+G +
Sbjct: 155 LAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLYRALREVLAEAVELGGSTLSDQSY 214
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + RE P A G+ ++ GR T + P Q
Sbjct: 215 RQPDGLPGGFQTRHAVYGREGLPCPA--CGRPVERRVVAGRGTHFCPTCQ 262
>gi|225873850|ref|YP_002755309.1| formamidopyrimidine-DNA glycosylase [Acidobacterium capsulatum ATCC
51196]
gi|225792432|gb|ACO32522.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC
51196]
Length = 280
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 136/302 (45%), Gaps = 47/302 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE + + E G++I+ + + + + D A+VL G+ I HR G
Sbjct: 1 MPELPEVETVAQGVHERAHGQRILAAEFSRAREPFK--TDPDTMAAVLTGQRIARVHRVG 58
Query: 60 KNLWLRLDSPPFPS-----------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K++ L++P P GMTG + +V P +
Sbjct: 59 KHIVFDLETPRPPKGKAEPADHQWIVHLGMTGRLLYSAASVPVP-----------PHTHG 107
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTV--DEFTDSLSK 166
+ + L G EL F D RRF ++ L + P S GP + EP+ + ++F
Sbjct: 108 R--LSLSSGHELRFVDARRFGRMGL-HSGARAQPFS--GPGS--EPLHISPEDFAALFRG 160
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
+K++IKA LL+Q + G+GN ADE LY A I P + A SLS+E L +++V+ KA
Sbjct: 161 RKLSIKAALLNQKLLHGVGNIYADESLYWAGIRPTRIAGSLSRERLLKLHAALQQVLRKA 220
Query: 227 LEVGADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPEL 275
+E+G S F + R +P +A +I + GR T Y P
Sbjct: 221 IELGGSSVSDYVDADGVRGFFQLEHRVYDRAGEPCRACA--AEIRKMVHAGRGTHYCPRC 278
Query: 276 QK 277
Q+
Sbjct: 279 QR 280
>gi|334881705|emb|CCB82605.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pentosus MP-10]
gi|339636945|emb|CCC15772.1| formamidopyrimidine-DNA glycosylase [Lactobacillus pentosus IG1]
Length = 274
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 144/298 (48%), Gaps = 44/298 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDN----KVIDGVSASDFEASVLGKAILSA 55
MPELPEVE RR + ++VK + IAD + K+I+ + F+ ++ + I +
Sbjct: 1 MPELPEVETVRRGL------NRLVKGATIADIDVYWPKIINN-DVALFKQRLINQTIQTI 53
Query: 56 HRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R+GK L R F G+T +++ + V E K++ L
Sbjct: 54 DRRGKYLLFR--------FSNGLTMVSHLR-----MEGKYNVVPRGEARDKHTHVVFHLT 100
Query: 116 DGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
D +L + D R+F ++ L+ + SV + +GP+ + + +T+ T +L K IK
Sbjct: 101 DDRDLLYNDTRKFGRMTLVPTGEELSVAGLRTIGPEPVADQLTLAYLTATLEHSKKMIKP 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV---- 229
LLLDQS I+GIGN ADE L+ +KIHP++ A SL+ + ATL I + E AL +
Sbjct: 161 LLLDQSKIAGIGNIYADETLWMSKIHPMRPANSLTADEIATLRDNI--ITEMALAIKGHG 218
Query: 230 ---------GADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
++ QF ++ + RE +P + G I+ I R T + P Q+L
Sbjct: 219 TTVHSFSTAFGEAGQFQNHLHVYGREGEPCERC--GTMIEKIKVAQRGTHFCPLEQRL 274
>gi|213964684|ref|ZP_03392884.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum
SK46]
gi|213952877|gb|EEB64259.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum
SK46]
Length = 287
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 34/299 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE+ RR ++ + +G +I S + + V A++F G+ ++++ R+G
Sbjct: 1 MPELPEVESVRRGLDTYVVGGRIDDSFVYNARAVRRQPGGAAEFIGRTRGRTVVASDRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K +WL LD + GM+G + ++ +T + F + L DG
Sbjct: 61 KFMWLTLDDDSAIAIHLGMSGQLRVEA--------PYTPNTLSGRHTRAAFDIALPDGAR 112
Query: 120 --LSFTDKRRFAKVRLLNDPTS----VP-PISELGPDALLEPMTVD--EFTDSLSKKKIT 170
++F D+R F V S VP P +++ PD LLEP TVD + K +
Sbjct: 113 HLINFNDQRTFGWVWACELVESHGRFVPEPAAKIAPD-LLEP-TVDVVALAHRMMKSRSP 170
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IKA+LL+Q+ +SGIGN ADE+L+ AK+ A LS A LL+ + V+E+AL G
Sbjct: 171 IKAVLLNQNIVSGIGNIYADEMLWAAKVDGRVPACDLSVRRLAKLLREGQSVLERALAAG 230
Query: 231 ------------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+S F + + +E +P G+ I + G R++ P Q+
Sbjct: 231 GTSFDALYVHVNGESGYFERSLNAYGQEGEPCPRC--GRAIVRLPFGNRSSYLCPTCQR 287
>gi|71893928|ref|YP_279374.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae J]
gi|71852055|gb|AAZ44663.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae J]
Length = 275
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 32/293 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKI K+++A D+ I ++ DF+ S++ I+ + K
Sbjct: 1 MPELPEVVTVVNALKTEVIGKKI-KNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + LD+ M G + YK + +W KY D L
Sbjct: 60 HILIFLDNRKVILSHLRMNGKYF-------TYK------SPQW-GKYDYISFVFSDNSVL 105
Query: 121 SFTDKRRFA--KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F +R + P+ +L P+ + VD+F + K +IKA+LLDQ
Sbjct: 106 NYNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFF--IKVDDFYQKIRKSTRSIKAILLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-SQFP 237
ISG+GN ADEV + KI P +TA +S++ ++ K+++++++++G S S +
Sbjct: 164 KIISGLGNIYADEVCFATKIFPGKTAKLISRKEAELIIYFSKKILQQSIKLGGSSISSYT 223
Query: 238 S---------NWI-FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
S N++ H+++ P KI GR T + P QKL+
Sbjct: 224 SLNAKEGKFQNFLKVHTKQNFPCSN--CQTKILKTVIAGRGTYFCPFCQKLDN 274
>gi|223984404|ref|ZP_03634543.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM
12042]
gi|223963646|gb|EEF68019.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM
12042]
Length = 306
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 131/292 (44%), Gaps = 31/292 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E I + ++ + K+I + A +F + G+ R+GK
Sbjct: 1 MPELPEVETVVRTLEL-LIPDRRIEHVEVRVPKMIQ-MDAGEFCRRLEGQHFRRFSRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++D F + M G Y V+ +E SK+ +LDDG +L
Sbjct: 59 YLIFQMDDVYFIA-HMRMEGKFY-------------VQRPEEPLSKHIHVIFDLDDGTQL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D R+F + L+ + ELGP+ + D L K+++ IK +LLDQS+
Sbjct: 105 RYHDTRKFGTMELMELNGDLRHFHELGPEPFDDEFNPDYCRAFLKKRRVPIKQVLLDQSF 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------- 233
++GIGN A+E+ + +I P + L+K L + ++++ A+E G S
Sbjct: 165 VAGIGNIYANEICFALRIDPRKRCDQLTKAQITALPEITRQILSLAIEAGGSSIRSYTSS 224
Query: 234 ----SQFPSNWIFHSREKKPGKAF-VDGKKIDFITAGGRTTAYVPELQKLNG 280
+F H RE G+A + G I I R T Y P QK G
Sbjct: 225 LGVTGRFQLQIQVHGRE---GEACPLCGGPIKKIAVAQRGTYYCPHCQKKRG 273
>gi|302539955|ref|ZP_07292297.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus
ATCC 53653]
gi|302457573|gb|EFL20666.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus
ATCC 53653]
Length = 262
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 126/279 (45%), Gaps = 24/279 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR + G +I + +AD V+ GV+A + + G+ + R GK
Sbjct: 1 MPELPDVEGFRRTLASCAQGHRIERVEVAD-PAVLRGVTAQRLKRELEGRRFAAPRRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L P FGMTG + + + P ++ + + LDDG +L
Sbjct: 60 WLIAPAGGPTL-ILHFGMTGGL-------------VCRSEGDPPERFGRVVLTLDDGHQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D+R+ + L V I E GPDAL + E L ++ +KA L DQS
Sbjct: 106 RYHDQRKLRGLWLATTDADVDRILGEQGPDAL--SLGRAELDSLLEGRRGRVKATLTDQS 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP-- 237
++G+GN + DE+L++A++HP L + L ++ V+ ++ G Q P
Sbjct: 164 VVAGLGNLLGDEILWRARVHPKSRTSDLGPDELRRLHTALRGVLSTSVRAG----QVPPR 219
Query: 238 SNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
++W+ R+ G+ + GRT+ + P Q
Sbjct: 220 ASWLTGHRDDPDPHCPRCGRPLRRGKIAGRTSTWCPRCQ 258
>gi|331698523|ref|YP_004334762.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans
CB1190]
gi|326953212|gb|AEA26909.1| Formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans
CB1190]
Length = 298
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 34/252 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H G++I +A + A+DF + G+ + + R+G
Sbjct: 1 MPELPEVEVVRRGLADHVAGRRIATVTVAHPRAIRRHAAGAADFTGRLAGRLVGAVRRRG 60
Query: 60 KNLWLRL----DSPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
K LWL L P P GM+G + V D + K+ +
Sbjct: 61 KYLWLELADAAQDAPQPGDDAVLAHLGMSGQML-------------VADHGKPDEKHLRV 107
Query: 111 FVELDD-GLELSFTDKRRFAKVRLLNDPTS-------VP-PISELGPDALLEPMTVDEFT 161
V DD G EL F D+R F L P + +P P++ + D + +D+
Sbjct: 108 RVTFDDDGPELRFVDQRTFGG--LSAHPLAPAAGGGLLPAPVAHIARDPMDPAFVLDDAV 165
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
+ +++ +K LLDQ+ +SGIGN ADE L++A++H + SL++ +L E
Sbjct: 166 AGIRRRRTGLKRALLDQTVVSGIGNIYADEALWRARLHWARPTESLTRAQGRAVLTAAAE 225
Query: 222 VIEKALEVGADS 233
V+++AL G S
Sbjct: 226 VMDEALAQGGTS 237
>gi|429217952|ref|YP_007179596.1| formamidopyrimidine-DNA glycosylase Fpg [Deinococcus
peraridilitoris DSM 19664]
gi|429128815|gb|AFZ65830.1| formamidopyrimidine-DNA glycosylase Fpg [Deinococcus
peraridilitoris DSM 19664]
Length = 286
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 131/293 (44%), Gaps = 45/293 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ IV+ ++ D A G+ + R+GK
Sbjct: 1 MPELPEVETTRRQLAPLLVGRTIVRIEHDGRHRYRDTHLAE-------GRRVTRLDRRGK 53
Query: 61 NLWLRLDSPPFPSFQF----GMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
L + + P S + GMTG RSA ++++ V LDD
Sbjct: 54 YLIAQFEDDPHESLELIVHLGMTGGF-----------RSAT-------GRHTRVTVHLDD 95
Query: 117 GLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L F D RRF K ++ + S+P + +GP+ L E + F + +K
Sbjct: 96 GSALYFQDSRRFGKWAVVRTGEYGSMPTLQNIGPEPLSEDFDEEAFVTQALNAPV-VKTW 154
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG---- 230
LL Q ++G+GN DE L++A IHP +T L+ E L I+EV+ +A+E G
Sbjct: 155 LLSQGPVAGLGNIYVDEALWRAGIHPART--RLAPEEARRLYTAIREVLTEAVEAGGSTL 212
Query: 231 ADSSQFPSN----W--IFHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQ 276
AD + N W H+ + GKA G I+ I G R T + PE Q
Sbjct: 213 ADHTYAQPNGESGWFQFRHNVYARKGKACARCGGTIEKIVLGQRGTHFCPECQ 265
>gi|34499517|ref|NP_903732.1| formamidopyrimidine-DNA glycosylase [Chromobacterium violaceum ATCC
12472]
gi|39931210|sp|Q7NQS5.3|FPG_CHRVO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|34105367|gb|AAQ61722.1| DNA-formamidopyrimidine glycosylase [Chromobacterium violaceum ATCC
12472]
Length = 270
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 31/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H G+ ++ +++ N + D V G+ +L+ R+ K
Sbjct: 1 MPELPEVETTRRGVEPHLEGRTLLGAVV--RNPSLRWPVPPDLSERVAGEKVLAVRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L +S GM+G++ + P K+ + L + + L
Sbjct: 59 YLLLECESGTL-LIHLGMSGSLRVMPAGAP-------------PQKHDHLDLLLGEQV-L 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF V P + P+ + LGP+ L + ++ ++ IK ++D
Sbjct: 104 RFRDPRRFGAVLWHLGPVEMHPLLQALGPEPLSDAFDGAALHQAIRRRGSPIKLAIMDNH 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A+E L+ A I P + A LS+ C L IK V+ +A++ G + +
Sbjct: 164 VVVGVGNIYANESLFHAGISPARAACDLSRADCDRLAAEIKAVLRRAIDAGGSTLRDFVD 223
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F ++ ++R+++P + + G I I G R+T Y P Q
Sbjct: 224 SEGKPGYFQQTYMVYNRQEEPCR--LCGTPIRQIRQGQRSTYYCPLCQ 269
>gi|345009586|ref|YP_004811940.1| formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu
4113]
gi|344035935|gb|AEM81660.1| Formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu
4113]
Length = 310
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 121/248 (48%), Gaps = 32/248 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V + DF A + G+ R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAEVQVLHPRAVRRHLGGPEDFAARLRGRRTGIVRRRG 60
Query: 60 KNLWLRLD---SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL D + GM+G + ++ + DE K+ + V D
Sbjct: 61 KYLWLPFDDDAAAEAVLAHLGMSGQLLVQ----------PAEAPDE---KHLRIRVRFAD 107
Query: 117 --GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-------LEPMTVDE--FTDSLS 165
G EL F D+R F + L + +VP E PDA+ L+P DE F +L
Sbjct: 108 AAGTELRFVDQRTFGGLSLHD---TVPGDLEGLPDAIAHIARDPLDP-AFDEAAFHTALR 163
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
+++ TIK LLDQS ISG+GN ADE L++A++H + +L++ A LL ++EV+
Sbjct: 164 RRRTTIKRALLDQSLISGVGNIYADEALWRARLHYDRPTATLARPRAAELLGHVREVMTA 223
Query: 226 ALEVGADS 233
AL VG S
Sbjct: 224 ALAVGGTS 231
>gi|169348424|ref|ZP_02866362.1| hypothetical protein CLOSPI_00139 [Clostridium spiroforme DSM 1552]
gi|169293893|gb|EDS76026.1| DNA-formamidopyrimidine glycosylase [Clostridium spiroforme DSM
1552]
Length = 270
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 135/293 (46%), Gaps = 42/293 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK------SIIADDNKVIDGVSASDFEASVLGKAILS 54
MPELPEVE RR ++ + K+I+ II DD +F+ V + I
Sbjct: 1 MPELPEVETVRRTLKNFVLNKRIISIDIMYPKIIEDD--------IEEFKNKVCNQVIND 52
Query: 55 AHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
R GK L +LD F S M G + + DE +K+ L
Sbjct: 53 IDRIGKFLIFKLDDVAFVS-HLRMEG-------------KYHYVNRDEPLNKHDHIVFNL 98
Query: 115 DDGLELSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDE--FTDSLSKKKIT 170
DDG +L + D R+F +++L L++ + P+S+LGP EP DE + L K +
Sbjct: 99 DDGKQLRYNDTRKFGRMKLVSLDNYANELPLSKLGP----EPFYADEKKLYEKLHKCNLP 154
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IK LLDQS I+GIGN A+E+ + + P A L+K+S L++ ++ +A++ G
Sbjct: 155 IKHALLDQSIIAGIGNIYANEICFAMGLDPYTPASKLTKKSVKELIEVASSILNEAIKQG 214
Query: 231 ADSSQ-FPSNWI---FHSREKKP--GKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ F +N I F + K K + G +I GR T Y + QK
Sbjct: 215 GTTIHSFSANGIDGLFQVKLKVHLQKKCSICGGEITKEAIKGRGTYYCKKCQK 267
>gi|414158334|ref|ZP_11414628.1| formamidopyrimidine-DNA glycosylase [Streptococcus sp. F0441]
gi|410870879|gb|EKS18836.1| formamidopyrimidine-DNA glycosylase [Streptococcus sp. F0441]
Length = 274
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ +K+I +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYSKMIK-TDLEEFQKEMPGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVLIRFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFVSKKLGPEPREQDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEASAIHDQTIAVLSQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 272
>gi|399155400|ref|ZP_10755467.1| formamidopyrimidine-DNA glycosylase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 272
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 14/227 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + E G I I N ++ G F+ + G+ L R+ K
Sbjct: 1 MPELPEVETVVRELREKICGDIISSVEIFRSNPIVQG-DLDTFQEQLCGRKFLDVRRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ + MTG + V D P+KY++ + L+ G ++
Sbjct: 60 YLIFNLEPKRYLVAHLRMTG-------------KFIVSDPLPEPTKYNRVWFNLESGRQM 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R F + + +D + +LG + L + MT+ F +L K IK+ LLDQ
Sbjct: 107 IFDDIRCFGTLEVYDDLADSKSLQKLGIEPLSKAMTLGYFKKNLGSSKREIKSALLDQQI 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
I+G+GN E+L+ ++IHP ++A S+++ + ++K K ++++A+
Sbjct: 167 IAGLGNIYVSEILFHSRIHPQRSAGSINEREWSLIIKYTKYILQEAI 213
>gi|311069404|ref|YP_003974327.1| formamidopyrimidine-DNA glycosylase [Bacillus atrophaeus 1942]
gi|419819938|ref|ZP_14343556.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus atrophaeus C89]
gi|310869921|gb|ADP33396.1| formamidopyrimidine-DNA glycosylase [Bacillus atrophaeus 1942]
gi|388476057|gb|EIM12762.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus atrophaeus C89]
Length = 275
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 133/295 (45%), Gaps = 39/295 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I I N + +F +++G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVRGKTIKSVEIRWPNIIKRPAEPEEFARNLIGETIQSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD F M + ++G +Y +D D+ K+ + DG +L
Sbjct: 61 FLLFHLD-------HFVMVSHLRMEG----KYGLHQAEDPDD---KHVHVVFTMTDGTQL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKIT-----IKA 173
+ D R+F + L + + P+S+LGP EP EFTD+ K+++ +K
Sbjct: 107 RYRDVRKFGTMHLFHPGEEMRELPLSQLGP----EP-DDKEFTDAYLKERLMKTNRAVKT 161
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ + G+GN DE L++A IHP A LS + L + IK +++A++ G +
Sbjct: 162 ALLDQKAVVGLGNIYVDEALFRAGIHPETKANQLSAKKIKKLHEEIKNTLQEAIDAGGST 221
Query: 234 -----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ KP K G I I GGR T + + QK
Sbjct: 222 VRSYINSQGEIGMFQLRHFVYGKKDKPCKTC--GTMISKIVVGGRGTHFCAKCQK 274
>gi|291437028|ref|ZP_06576418.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
ghanaensis ATCC 14672]
gi|291339923|gb|EFE66879.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
ghanaensis ATCC 14672]
Length = 286
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + ++ + V ++ A DF + G I +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGADDFAHRLEGHRIGTADRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L D+ GM+G + V+ D K+ + V D L
Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLL-------------VQPHDAPDEKHLRIRVRFADDL 107
Query: 119 --ELSFTDKRRFAKVRLLND-PTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L + P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 HTELRFVDQRTFGGLSLHDTTPDGLPDVIAHIARDPL-DPLFDDEAFHRALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A+IH ++ LL +++V+ AL VG S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARIHYESPTAGFTRPRTLLLLGHVRDVMNAALAVGGTS 226
>gi|86608720|ref|YP_477482.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557262|gb|ABD02219.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 279
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE R+ ++ +G +I V+ ++A + I + F S++G R+
Sbjct: 1 MPELPEVETVRQDLQRLTLGPRILAVEVLLA---RTIAYPAGEMFGRSLIGTRFTQWQRR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK L LDS MTG ++++G S +++ + ++G
Sbjct: 58 GKYLLGSLDSRAVLGVHLRMTGQLLWVQGSTPL--------------SAHTRVRLAFEEG 103
Query: 118 LELSFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D+R F ++ L+ +P + LGP+ + F +L K + IKA
Sbjct: 104 WDLRFVDQRTFGQMWLVPAGVELEAVIPTLQTLGPEPFSPAFSEAYFQAALQKSRRLIKA 163
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV---- 229
LLDQS ++G+GN ADE L+ + IHPL AV LS + A L + + EV+ LE
Sbjct: 164 ALLDQSLVAGVGNIYADEALFLSGIHPLTPAVQLSDVAKARLREALIEVLRAGLEQRGTT 223
Query: 230 --------GADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
G + + W++ RE P + + G I + GR+ + P Q
Sbjct: 224 LRDYRDLRGLNGNYQGQAWVY-GREGDPCR--LCGTPIQRMKLAGRSAHFCPHCQ 275
>gi|224823788|ref|ZP_03696897.1| formamidopyrimidine-DNA glycosylase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224604243|gb|EEG10417.1| formamidopyrimidine-DNA glycosylase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 272
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 122/288 (42%), Gaps = 30/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E H G I ++ + + A++ G +L+ R+ K
Sbjct: 1 MPELPEVETTRRGVEPHLTGATITDVVVREGR--LRWPVPPALAATLSGLPVLAVRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S GM+G++ R DT P K+ + LD L
Sbjct: 59 YLLLEFASGTL-LVHLGMSGSL-----------RLVAADTP--PQKHDHIDLILDGRTAL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D RRF + P P+ + LGP+ L + D + + +IK LL+D
Sbjct: 105 RYRDPRRFGAMLWHIGPVEFHPLLAALGPEPLGDAFDADTLYRASRGRTTSIKQLLMDNH 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A+E L+QA I P + A L+ C L IK ++ +A+E G + +
Sbjct: 165 VVVGVGNIYANESLFQAGIRPGRAARRLTHADCERLAAAIKSILARAIEAGGSTLRDFVG 224
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + R ++P G I I G R++ Y P Q
Sbjct: 225 ASGKPGYFQQTYAVYGRAEEP--CHTCGSLIRQIRQGQRSSYYCPHCQ 270
>gi|330466267|ref|YP_004404010.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Verrucosispora maris AB-18-032]
gi|328809238|gb|AEB43410.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Verrucosispora maris AB-18-032]
Length = 285
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE R+ + G++I + V V+ A VL G+ +L R+G
Sbjct: 1 MPELPEVETVRQGLARWVTGRRIESVEVRHPRAVRRHVAGGAHFADVLAGRTVLDVCRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ + V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPATAPEEPHLRVR------------FRFTDDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + ++P I+ + D L + +F ++ +++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSEGGATLPAEIAHIARDPLDPQFSDADFVTAMRRRRTEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ ISG+GN ADE L++A +H + +L+ + LL +++V+ +A+ G S
Sbjct: 169 TLISGVGNIYADEALWRAGLHGTRPTDALTGPAVRRLLGHVRDVLTEAITAGGTS 223
>gi|357410944|ref|YP_004922680.1| formamidopyrimidine-DNA glycosylase [Streptomyces flavogriseus ATCC
33331]
gi|320008313|gb|ADW03163.1| formamidopyrimidine-DNA glycosylase [Streptomyces flavogriseus ATCC
33331]
Length = 285
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 116/239 (48%), Gaps = 19/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V ++ +DF A + G +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWTAGRTVEAVEVLHPRAVRRHLAGGADFAARLRGLRFGTAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LW+ LD GM+G + V+ D K+ + + DD L
Sbjct: 61 KYLWVPLDEADSSLLGHLGMSGQLL-------------VQPEDAVDEKHLRIRIRFDDAL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
EL F D+R F + L N P +P I+ + D L F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHLALRLRRTTVKRA 167
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L+++++H + SL++ A LL ++ V+ +AL+ G S
Sbjct: 168 LLDQSLISGVGNIYADEALWRSRLHYERPTASLTRPRTAELLGHVRAVMREALDQGGTS 226
>gi|326776325|ref|ZP_08235590.1| Formamidopyrimidine-DNA glycosylase [Streptomyces griseus
XylebKG-1]
gi|326656658|gb|EGE41504.1| Formamidopyrimidine-DNA glycosylase [Streptomyces griseus
XylebKG-1]
Length = 286
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 118/240 (49%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LW+ +D GM+G + V+ D K+ + + DD L
Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLL-------------VRPADAPDEKHLRIRMRFDDAL 107
Query: 119 --ELSFTDKRRFAKVRL-LNDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHANTPDGLPDTIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A++H + +L++ A LL ++V+ AL G S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTATLTRPRSAELLGHARDVMNAALAQGGTS 226
>gi|438118341|ref|ZP_20871318.1| formamidopyrimidine-DNA glycosylase [Spiroplasma melliferum IPMB4A]
gi|434155768|gb|ELL44686.1| formamidopyrimidine-DNA glycosylase [Spiroplasma melliferum IPMB4A]
Length = 277
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 131/291 (45%), Gaps = 28/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +H +GK I I + + + + +F ++ + I R GK
Sbjct: 1 MPELPEVETVRRILTKHVVGKTITDCQIFWNKIIKYPLDSKEFIKEIVKQKINRIDRMGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+L LD S M G Y ++ + EW ++ ELD +L
Sbjct: 61 HLLFILDDYVLIS-HLRMEGKYYF----------TSKDEPGEW--QHIMVLFELDHQFQL 107
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L ND P+++LG + E +TV ++ K IK LL+Q
Sbjct: 108 RYHDTRKFGTMHLYSKNDYLQQAPLNKLGYEPFDEKITVSYLKNAWQNKSQPIKTTLLEQ 167
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ I GIGN A+E+L+ +KIHP + +L + +++ K V++KA++ G +
Sbjct: 168 NVIVGIGNIYANEILFASKIHPGERTKNLVDQDYQNIIENTKLVLQKAIDEGGTTIATYH 227
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+F H R K + + ID I GR T + QKL
Sbjct: 228 PEPGMDGKFLQQLKVHGRNKM--ECLNCHQLIDKIFINGRGTYFCNYCQKL 276
>gi|417092558|ref|ZP_11957174.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis R61]
gi|353532237|gb|EHC01909.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis R61]
Length = 275
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 135/295 (45%), Gaps = 35/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + + GV A F ++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDA--FCQDLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWPS-KYSKFFVELDD 116
L IY+ + + R K D+ P+ K+ F D
Sbjct: 59 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSD 100
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++EF L+K K IK+
Sbjct: 101 GSTLVYQDVRKFGTMELLGKADVGAYFISRKIGPEPTEEDFVLEEFALKLAKSKKPIKSH 160
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS ++G+GN DEVL++A++HP Q + LS E A L + V++ +E G +
Sbjct: 161 LLDQSLVAGLGNIYVDEVLFKAQVHPAQASNQLSAEQVADLRQATIAVLQLGIEKGGSTI 220
Query: 235 QFPSNWI--------FHSREKKPGKAFVDGK-KIDFITAGGRTTAYVPELQKLNG 280
+ N + + K G++ + +I I GGR T + P+ Q NG
Sbjct: 221 RTYKNALGMDGTMQDYLQVYGKTGQSCPRCQTEIVKIQLGGRGTHFCPKCQVKNG 275
>gi|365850851|ref|ZP_09391305.1| DNA-formamidopyrimidine glycosylase [Lactobacillus parafarraginis
F0439]
gi|363718100|gb|EHM01455.1| DNA-formamidopyrimidine glycosylase [Lactobacillus parafarraginis
F0439]
Length = 280
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 136/295 (46%), Gaps = 34/295 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E G + V S+ K+++ + DF A++ + I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVAGSQ-VTSVDVLYPKMVN-LPPEDFAAALKDRIIEQIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIK--GVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
L+LR+ M G ++ G +T K++ L DG
Sbjct: 59 YLFLRMSGHQTIVSHLRMEGNYDVQPEGTPLT---------------KHTHIVFHLADGR 103
Query: 119 ELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L + D R+F ++ L+ +V + +GP+ +T+D SK + IK LL
Sbjct: 104 QLRYNDSRKFGRMTLVETGQEMTVAGLKTIGPEPTESDLTLDYMKKIFSKSRKVIKPFLL 163
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL--------- 227
DQS I+G+GN ADEVL+ +KI+P Q +LS TL K I I+ A+
Sbjct: 164 DQSKIAGLGNIYADEVLWLSKINPKQPVNTLSLSELKTLRKNIIHEIQIAIAGHGTTVHS 223
Query: 228 --EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
++ QF ++ + R+ +P G I+ I R T + P+ Q L+G
Sbjct: 224 YSTAYGEAGQFQNHLNVYGRQGEP--CLRCGTPIEKIKLAQRGTHFCPKCQVLHG 276
>gi|269127638|ref|YP_003301008.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM
43183]
gi|268312596|gb|ACY98970.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM
43183]
Length = 297
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 47/258 (18%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V V A+DF A ++G I +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAAAEVLHPRAVRRHVGGAADFTARLIGNTIGAARRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L + GM+G + + A + + V+ T D
Sbjct: 61 KYLWLPLAEGGGAIVAHLGMSGQLLVGDPARARQRHLRVRLTFT------------DGSH 108
Query: 119 ELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL----------------------LEPMT 156
+L F D+R F + ++EL PDA LEP
Sbjct: 109 DLRFVDQRTFGHLM----------VAELVPDAFGRAGKEAEAAVPAPVAHIAPDPLEPAF 158
Query: 157 VDE-FTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATL 215
DE F +L +++ IK LLDQS ISG+GN ADE L++A++H + +L++ + +
Sbjct: 159 DDEAFYRALRRRRTGIKRALLDQSLISGVGNIYADEALWRARLHWARATENLTRAEVSRV 218
Query: 216 LKCIKEVIEKALEVGADS 233
L+ ++EV+ AL G S
Sbjct: 219 LEGVREVMTAALAAGGTS 236
>gi|116872993|ref|YP_849774.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741871|emb|CAK20995.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 273
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 129/288 (44%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVTTPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D + SK++ +D EL
Sbjct: 60 FLLFDLTNCTIMS-HLRMEG-------------KFRLMDEKDEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGENETRSIKKLGPEPLTNTFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++GIGN ADE+ ++AK+ P + A SLS + + + ++ +A+ +G + +
Sbjct: 166 KLVAGIGNIYADEICFEAKVQPERPANSLSNKEIKRIFEATISIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTGEPCVVCGTPIEKIKLNGRGTHFCPHCQK 273
>gi|329768945|ref|ZP_08260371.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325]
gi|328836167|gb|EGF85849.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325]
Length = 286
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 137/301 (45%), Gaps = 37/301 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIA-------DDNKV-IDGVSASDFEASVLGKAI 52
MPELPEVE + +E+ KKI+ + D NK+ I S DF +V+GK I
Sbjct: 1 MPELPEVENIKLGLEDSLKNKKILSVTFSNTVKEGHDLNKMPIVKQSLIDFSNNVVGKKI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
R+GK L+L L+ + FGMTGA ++ + T++ K+
Sbjct: 61 KELSRRGKYLYLALNKGYIIT-HFGMTGAFFLVN--------DIAEITNKNYYKHRHVIF 111
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI--- 169
ELD +L F+D RRF ++R + P L P+ E F D L +KK
Sbjct: 112 ELDTNEKLVFSDIRRFGELRYVEKIGEFKPFVNLAPEPF-EKKAKQYFLDKLLEKKYKDQ 170
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
+IKALLLD + G GN EVLY+ +IHPL L+ + L + ++E A++
Sbjct: 171 SIKALLLDGNVFCGCGNIYDCEVLYRKRIHPLTKPCELTLKEKEDLFDELVFILEWAIKE 230
Query: 230 GADSSQFPSNWI-----------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
G + S+++ FH K K G ++ I GR++ Y P QK
Sbjct: 231 GGSTI---SDYVHADGGEGNMQNFHQIYGK--KKCPLGHDVENINIKGRSSHYCPVCQKR 285
Query: 279 N 279
N
Sbjct: 286 N 286
>gi|385678565|ref|ZP_10052493.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Amycolatopsis sp. ATCC 39116]
Length = 287
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 20/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + + + DF + G + +A R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVAGRGIARVEVLHPRAIRRHELGPEDFTGRLAGARVEAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG-L 118
K LWL L GM+G + ++ DE K+ + + DDG
Sbjct: 61 KYLWLELSDKEAILAHLGMSGQMLVQPEGAP----------DE---KHLRVRIRFDDGGP 107
Query: 119 ELSFTDKRRFAKVRL----LNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
EL F D+R F + L +D T +P PI+ + D + + +L ++ IK
Sbjct: 108 ELRFVDQRTFGGLALADLVTSDGTLLPAPIAHIARDPMDPAFDPAQAVKALRSRRTEIKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SG+GN ADE L++A++H + L++ A +L+ EV+ +AL G S
Sbjct: 168 ALLDQTLVSGVGNIYADESLWRARLHWARPTEKLTRAQGAAVLEAATEVMNEALHAGGTS 227
>gi|182435700|ref|YP_001823419.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|238689009|sp|B1VYY1.1|FPG_STRGG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|178464216|dbj|BAG18736.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 286
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 118/240 (49%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LW+ +D GM+G + V+ D K+ + + DD L
Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLL-------------VRPADAPDEKHLRIRMRFDDAL 107
Query: 119 --ELSFTDKRRFAKVRL-LNDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHANTPDGLPETIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A++H + +L++ A LL ++V+ AL G S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTATLTRPRSAELLGHARDVMNAALAQGGTS 226
>gi|163745032|ref|ZP_02152392.1| formamidopyrimidine-DNA glycosylase [Oceanibulbus indolifex HEL-45]
gi|161381850|gb|EDQ06259.1| formamidopyrimidine-DNA glycosylase [Oceanibulbus indolifex HEL-45]
Length = 283
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE RR + G+ I + A+ N+ D A L G+ + R+
Sbjct: 1 MPELPEVETVRRGLAPAMEGQVIAR---AEVNRPDLRWPFPDRMAERLTGQRVSLLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + L+ GM+G + + G + Q++ + P K+ + + +G
Sbjct: 58 KYILADLEGGESLLVHLGMSGRMLVSGDPLGQFQHN-----HPAPEKHDHVVLHMGNGAR 112
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + LLN D + ++ LGP+ L +L + + IK+ LLD
Sbjct: 113 ITFNDPRRFGAMDLLNTADADAHKLLASLGPEPLGNDFHEAHLVAALKGRNMPIKSALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
Q ++G+GN E LY+A IHP + A +S A L+ I++V+ A+ G S
Sbjct: 173 QRIVAGLGNIYVCEALYRAGIHPARKAGRISASRIAGLVPIIRQVLADAITAGGSSLKDF 232
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE K + I I GGR++ Y P Q+
Sbjct: 233 RQADGELGYFQHSFDVYGREGKACRRPSCDGTIGRIVQGGRSSFYCPRCQR 283
>gi|323359693|ref|YP_004226089.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum
StLB037]
gi|323276064|dbj|BAJ76209.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum
StLB037]
Length = 296
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 140/306 (45%), Gaps = 39/306 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E G I + D+ + A+ FEA + G+ I +A R+G
Sbjct: 1 MPELPEVEVVRAGLEPAVTGALITSVDVRDERALTRHTGGAAHFEAELTGRRIDAAVRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW+ + + GM+G + ++ + + ++ E P + L
Sbjct: 61 KFLWMPVSADEAIVTHLGMSGQMLLRVPGAPEERHERIRIELEHP---------VHGPLS 111
Query: 120 LSFTDKRRFAKV---RLLNDP--------TSVP----PISELGPDALLEPMTVDEFTDSL 164
+ F D+R F + RL++ P +S+P ++ + D L V F +
Sbjct: 112 VVFADQRTFGSLAVDRLVDTPDGAAAGRGSSLPRVPTQVAHIARDPLDPAFDVSRFRSRV 171
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
+ IK +LLDQ+ SGIGN ADE L+ A+IHP A SL + LL ++EV++
Sbjct: 172 GRTASGIKRVLLDQTVASGIGNIYADESLWAARIHPEAVASSLPTRAVNRLLGEVREVLD 231
Query: 225 KALEVGADS--SQF-----PSNWIFHS-----REKKPGKAFVDGKKIDFITAGGRTTAYV 272
KAL G S +Q+ + + HS R +P G+ I ++ R++ +
Sbjct: 232 KALAEGGTSFDAQYVNVNGQAGYFAHSLNAYGRTGQPCPRC--GRPIVRVSFMNRSSHFC 289
Query: 273 PELQKL 278
P Q+L
Sbjct: 290 PHCQRL 295
>gi|407978364|ref|ZP_11159196.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. HYC-10]
gi|407415132|gb|EKF36745.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. HYC-10]
Length = 277
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR ++ GK I I N + +F + G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLKRLVKGKTIETVDIKWPNIIKRPGEPEEFARRMAGETIQTIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + V + ++ K+ DG EL
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYRVHEANDPYDKHVHVVFTFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LG + + T + L K +K LLDQ
Sbjct: 107 RYHDVRKFGTMHLFHPGEEEKELPLSQLGYEPFSDAFTPAYLWEQLKKTSRVVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
+ G+GN DEVL++A IHP A LS ESC L K I + ++ A++ G
Sbjct: 167 KIVVGLGNIYVDEVLFKAGIHPETKANQLSLESCKVLHKHIIDTLQVAVDAGGSTIRSYI 226
Query: 231 ---ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D F + + R +P + G I+ GGR T + QK
Sbjct: 227 NSQGDIGTFQMQLLVYDRRGEPCQTC--GSIIEKTVVGGRGTHFCVTCQK 274
>gi|418967516|ref|ZP_13519179.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis SK616]
gi|383344129|gb|EID22299.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis SK616]
Length = 274
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKIY-SIDIRYPKMIK-TDLDEFQKEVPGQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + V F LSK K IK LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDVQAFQVVLSKSKKPIKTHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQECSRCGTIIEKIQLGGRGTHFCPTCQR 272
>gi|386852251|ref|YP_006270264.1| formamidopyrimidine-DNA glycosylase [Actinoplanes sp. SE50/110]
gi|359839755|gb|AEV88196.1| formamidopyrimidine-DNA glycosylase [Actinoplanes sp. SE50/110]
Length = 285
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 112/235 (47%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE R + + G+ + + + + + F A + G+ IL R+G
Sbjct: 1 MPELPEVETVRMGLAKWVTGRTVSAVEVHHPRAIRRHLPGDTHFIAMLTGRTILDVARRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ K V+ F DDG E
Sbjct: 61 KYLWLPLDSGDAIIAHLGMSGQLLMQPGTADDEKHLRVR------------FRFTDDGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + + +P IS + D + D F+ L + +K LLDQ
Sbjct: 109 LRFVDQRTFGGLSVSEGGADLPAEISHIARDPIDPLFDDDAFSARLRGRHTEVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
S ISG+GN ADE L++A++H + LS+ + A LL+ +++V+ +A+ G S
Sbjct: 169 SLISGVGNIYADEALWRARLHGTRPTDKLSRPAVARLLQHVRDVLGEAIVAGGTS 223
>gi|455737689|ref|YP_007503955.1| Formamidopyrimidine-DNA glycosylase [Morganella morganii subsp.
morganii KT]
gi|455419252|gb|AGG29582.1| Formamidopyrimidine-DNA glycosylase [Morganella morganii subsp.
morganii KT]
Length = 269
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 36/290 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G V+ + + ++ VS S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNT-VRYVEVRNRRLRWPVSEQIERLS--DRPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + GM+G++ R +++T E K+ + L DG L
Sbjct: 58 YLLIELPEG-WIIIHLGMSGSL-----------RILLEETPE--EKHDHVDMVLGDGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF +D + P ++ LGP+ L + K+ +K+ L+D
Sbjct: 104 RYTDPRRFGAWLWADDLATCPVLANLGPEPLSDDFDAAYLFAKSRKRNTPVKSWLMDNKI 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+ G+GN A+E L+ ++IHPL+ A L+++ A L+ IK+V+ ++++ G + +
Sbjct: 164 VVGVGNIYANESLFLSRIHPLRPAKDLTEDEVARLVATIKQVLTESIKQGGTTLK----- 218
Query: 241 IFHSREKKPG----KAFVDGK----------KIDFITAGGRTTAYVPELQ 276
F + KPG + FV GK KI+ + G R+T + P Q
Sbjct: 219 DFLQSDGKPGYFAQELFVYGKQGECCANCGQKIEVVKVGQRSTFFCPACQ 268
>gi|443672937|ref|ZP_21138013.1| Formamidopyrimidine-DNA glycosylase [Rhodococcus sp. AW25M09]
gi|443414422|emb|CCQ16351.1| Formamidopyrimidine-DNA glycosylase [Rhodococcus sp. AW25M09]
Length = 272
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 136/293 (46%), Gaps = 39/293 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE AR+ +E+ +G+ IV AD + + + ++ G + A R+GK
Sbjct: 1 MPELPEVENARQVVEK-ALGRVIVDIDDADTFECRPHMPG-EIAHALKGGQLTEACRRGK 58
Query: 61 NLWLRL-----DSPPFPSFQFGMTGAIYIK---GVAVTQY----KRSAVKDTDEWPSKYS 108
+W S P GM G + + G + ++Y + TD+ +++
Sbjct: 59 AMWCETVTADGSSGPTLGIHLGMGGRVIVTAPDGDSTSRYGGGDPHVGERPTDK--PEWT 116
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
+F + DDG +L DKRR +VRL P I LGPDA +T DEF +
Sbjct: 117 RFSMTFDDGGQLRLFDKRRLGRVRL------EPDIDALGPDA--AEITRDEFRHRIGSSA 168
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+KA LLDQ+ I+G+GN +ADEVL+Q++ P + A +L+ E L ++ I A++
Sbjct: 169 APLKARLLDQAAIAGVGNLLADEVLWQSEQAPSRRAKTLTTEELDELRVVLRRAIRAAIK 228
Query: 229 VGADSSQFPSNWIFHSREKKP-----GKAFVDGKKIDFITAGGRTTAYVPELQ 276
G H+ E P G + T GGRTT + Q
Sbjct: 229 KGG----------VHTGEIIPFRKANATCPRCGAPMSRGTVGGRTTWWCSREQ 271
>gi|146309771|ref|YP_001174845.1| formamidopyrimidine-DNA glycosylase [Enterobacter sp. 638]
gi|166988461|sp|A4W514.1|FPG_ENT38 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|145316647|gb|ABP58794.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638]
Length = 269
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS S K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSNEIHTLS--DKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSEAFNAEYLKARCAKKKTPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS++ C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEQECEILVKVIKAVLLRSIEQGGTT 216
>gi|89100390|ref|ZP_01173254.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911]
gi|89084909|gb|EAR64046.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911]
Length = 275
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++E GK+I + I + A F ++ G+ IL R+GK
Sbjct: 1 MPELPEVETVRKTLKELVTGKEIGQVSIHWPKMIKQPGEAEQFADALAGQTILDVGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D + + + ++G + A+ +E K++ DG EL
Sbjct: 61 FLIIYTDD-------YALVSHLRMEG-------KYALYSKEEDKDKHTHVIFHFTDGSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + + P+S+LGP+ E T L+ +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFAKGEEFASLPLSQLGPEPFSEEFTPQFLQQRLAGTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A IHP + A SLS + L K I + +A+E G +
Sbjct: 167 KAVVGLGNIYVDEALFRAGIHPERLASSLSDDEIGRLHKEIVATLSEAVEKGGSTIRSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R+ + K G ++ I GGR T + P Q
Sbjct: 227 NSQGQIGMFQLELFVYGRKGEACKTC--GSTLERIIVGGRGTVFCPVCQ 273
>gi|299822774|ref|ZP_07054660.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM
20601]
gi|299816303|gb|EFI83541.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM
20601]
Length = 273
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E IGK I +I K+I G+ A +F ++G+ I + R+GK
Sbjct: 1 MPELPEVENVRTTLERQVIGKTI-DQVIVHVPKMIHGLPADEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S M G + V E +K++ D EL
Sbjct: 60 FLLFDLTDCTILS-HLRMEG-------------KFRVYPETEPTTKHTHIIFHFTDQTEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F +++ + + + +LGP+ L + F L K +K LLDQ
Sbjct: 106 RFLDVRKFGTMQVAAKHQEETTNSLQKLGPEPLSAHFELAAFASKLKKTTRAVKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++A++ P++ LS A L + K++I A+E G S +
Sbjct: 166 KLVAGVGNIYADEICFEAEVLPMRGGNELSDAEVAALYEATKKIIGIAVEAGGSSIR--- 222
Query: 239 NWIFHSREKKPGKAFVDGKKIDFITAGGRT 268
+ E GK G DF+ GRT
Sbjct: 223 -----TYENSQGK---KGNYQDFLKVYGRT 244
>gi|321312442|ref|YP_004204729.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus subtilis BSn5]
gi|320018716|gb|ADV93702.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus subtilis BSn5]
Length = 276
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + +E K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A +HP A LS ++ TL IK +++A++ G +
Sbjct: 167 KTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + + QK
Sbjct: 227 NSQGEIGMFQLQHFVYGKKDEPCKNC--GTMISKIVVGGRGTHFCAKCQK 274
>gi|239991060|ref|ZP_04711724.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL
11379]
gi|291448062|ref|ZP_06587452.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
roseosporus NRRL 15998]
gi|291351009|gb|EFE77913.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces
roseosporus NRRL 15998]
Length = 286
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G + +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARLGAAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LW+ ++ GM+G + V+ D K+ + + DD L
Sbjct: 61 KYLWVPIEEASASLLGHLGMSGQLL-------------VQPADAPDEKHLRIRMRFDDAL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPDGLPDTIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++AK+H + +L++ A LL ++V+ AL G S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRAKLHYDRPTATLTRPKSAELLGHARDVMNAALAQGGTS 226
>gi|392961135|ref|ZP_10326598.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans DSM
17108]
gi|421055125|ref|ZP_15518089.1| formamidopyrimidine-DNA glycosylase [Pelosinus fermentans B4]
gi|421058993|ref|ZP_15521626.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans B3]
gi|421067086|ref|ZP_15528601.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans A12]
gi|421072005|ref|ZP_15533118.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans A11]
gi|392440228|gb|EIW17916.1| formamidopyrimidine-DNA glycosylase [Pelosinus fermentans B4]
gi|392446593|gb|EIW23878.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans A11]
gi|392450874|gb|EIW27881.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans A12]
gi|392454386|gb|EIW31223.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans DSM
17108]
gi|392459732|gb|EIW36115.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans B3]
Length = 274
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKS--IIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPE+PEVE RR++ E G+ IV+ ++A +++ S+++F+A + + I + R+
Sbjct: 1 MPEMPEVEIIRRSLIEKISGRTIVEVEFLLA---RLVKWPSSAEFQAVLTNRKIETVARR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQY-KRSAVKDTDEWPSKYSKFFVELDDG 117
GK L LD MTG + QY R KD K+++ +LD+G
Sbjct: 58 GKYLLFHLDDKQVLVIHLRMTGRL--------QYITRDGEKD------KFTRILFKLDNG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R + L+ ++ + + +GP+ L ++ T+ L K IKA+L
Sbjct: 104 DILVYADTRTLGTLYLMPFDELWRIAGLFTMGPEPLTPEFSLIYLTEMLKKHHGKIKAIL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG----- 230
L+Q YI G+GN DE + A IHP + A SLS+ L I +VI +E G
Sbjct: 164 LNQKYIGGLGNIYVDECMAIAGIHPERIASSLSENENEKLYHAINKVIADGIEHGGTTFR 223
Query: 231 --------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ S Q+ N + R+ +P G I GR T + P+ QK
Sbjct: 224 DYRDGDGKSGSHQYHLN--VYGRKDEP--CLSCGTPIQRKEVAGRGTHFCPKCQK 274
>gi|383808920|ref|ZP_09964449.1| DNA-formamidopyrimidine glycosylase [Rothia aeria F0474]
gi|383448314|gb|EID51282.1| DNA-formamidopyrimidine glycosylase [Rothia aeria F0474]
Length = 327
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 121/273 (44%), Gaps = 53/273 (19%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE R ++ H G+ I + + D V +DF A + G I +R+G
Sbjct: 1 MPELPEVETVREGVQTHAAGRVIERVRVLDARSTRRHVPGTADFAARLEGTRIHGVYRRG 60
Query: 60 KNLWLRLDS------------PPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKY 107
K +WL L + P GM+G + VK D P K+
Sbjct: 61 KYMWLTLAATGRGGCASGELLPYALVIHLGMSGQLL-------------VKTPDFAPEKH 107
Query: 108 SKFFVELD--DG------LELSFTDKRRFAKVRLLNDPTSVPPISELG-----PDALLEP 154
K +EL+ DG EL F D+R F + L + + +P + L P+ L P
Sbjct: 108 LKIVLELEPADGESTGETTELRFVDQRIFGGMFLSDVVSDIPASASLSGAEEIPEEFLVP 167
Query: 155 MTVDE---------FTDSLSKKKIT-----IKALLLDQSYISGIGNWVADEVLYQAKIHP 200
V F SL + K+ IK LLLDQS +SGIGN ADE L++A+IH
Sbjct: 168 QAVQHIGRDPVDPYFDLSLVRAKMLRTASGIKRLLLDQSVVSGIGNIYADEALWRARIHY 227
Query: 201 LQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ + +LS L +++V+ +AL G S
Sbjct: 228 AKPSRTLSAAQTRELFAAVQQVLTEALRAGGTS 260
>gi|221310849|ref|ZP_03592696.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315175|ref|ZP_03596980.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320092|ref|ZP_03601386.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324374|ref|ZP_03605668.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767671|ref|NP_390786.2| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|402777063|ref|YP_006631007.1| formamidopyrimidine-DNA glycosidase [Bacillus subtilis QB928]
gi|452915009|ref|ZP_21963635.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis MB73/2]
gi|7531268|sp|O34403.4|FPG_BACSU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|225185299|emb|CAB14868.2| formamidopyrimidine-DNA glycosidase [Bacillus subtilis subsp.
subtilis str. 168]
gi|402482243|gb|AFQ58752.1| Formamidopyrimidine-DNA glycosidase [Bacillus subtilis QB928]
gi|407965746|dbj|BAM58985.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis BEST7003]
gi|452115357|gb|EME05753.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis MB73/2]
Length = 276
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I I N + +F + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + +E K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T D L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A +HP A LS ++ TL IK +++A++ G +
Sbjct: 167 KTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + ++ +P K G I I GGR T + + Q
Sbjct: 227 NSQGEIGMFQLQHFVYGKKDEPCKNC--GTMISKIVVGGRGTHFCAKCQ 273
>gi|410085759|ref|ZP_11282474.1| Formamidopyrimidine-DNA glycosylase [Morganella morganii SC01]
gi|409767704|gb|EKN51778.1| Formamidopyrimidine-DNA glycosylase [Morganella morganii SC01]
Length = 269
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 36/291 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G V+ + + ++ VS S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGNT-VRYVEVRNRRLRWPVSEQIERLS--DRPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + GM+G++ I +++T E K+ + L DG L
Sbjct: 58 YLLIELPEG-WIIIHLGMSGSLLI-----------LLEETPE--EKHDHVDMVLGDGKIL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF +D + P ++ LGP+ L + K+ +K+ L+D
Sbjct: 104 RYTDPRRFGAWLWADDLATCPVLANLGPEPLSDDFDAAYLFAKSRKRNTPVKSWLMDNKI 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+ G+GN A+E L+ ++IHPL+ A L+++ A L+ IK+V+ +++ G + +
Sbjct: 164 VVGVGNIYANESLFLSRIHPLRPAKDLTEDEVARLVATIKQVLTESIRQGGTTLK----- 218
Query: 241 IFHSREKKPG----KAFVDGK----------KIDFITAGGRTTAYVPELQK 277
F + KPG + FV GK KI+ + G R+T + P Q
Sbjct: 219 DFLQSDGKPGYFAQELFVYGKQGECCANCGQKIEVVKVGQRSTFFCPACQH 269
>gi|219848489|ref|YP_002462922.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM
9485]
gi|254789432|sp|B8G9X1.1|FPG_CHLAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|219542748|gb|ACL24486.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM
9485]
Length = 275
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ + + IV D +++ +F A V G+ I + R+ K
Sbjct: 1 MPELPEVETVARSLAPQLLSRTIVGLAKLDWPRMLTP-PPPEFAALVAGRRIEAVGRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD+ G T AI+++ A D + + F ++LDDG L
Sbjct: 60 WLLLTLDA--------GWTLAIHLRMSGHLLVAEPAAAD-----APHVHFALDLDDGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D+R+F +V LL+ + + GP+ L + T + L ++ IKALLLDQ
Sbjct: 107 IFDDQRKFGRVHLLDSTGLLALDAAHGPEPLTDDFTPAVLAERLRNRQAPIKALLLDQRL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
I+GIGN A+E L+ A IHPL +L+ + A L I+ V+ A+
Sbjct: 167 IAGIGNIYANEALWLAGIHPLTPGGTLTVDQIAALHHAIRLVLADAI 213
>gi|297583658|ref|YP_003699438.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens
MLS10]
gi|297142115|gb|ADH98872.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens
MLS10]
Length = 286
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 125/283 (44%), Gaps = 30/283 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + E IG+ I + + + F + G+ I S RKGK
Sbjct: 1 MPELPEVETVRQTLTELLIGRTIEDVWVGWPAMIKEPDDVERFALMLTGQTIQSIGRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD S M G + A+K+ SK++ + DG L
Sbjct: 61 FLKLYLDDCVLVS-HLRMEG-------------KYALKEAGSERSKHTHVVIRFTDGTAL 106
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDAL-LEPMTVDEFTDSLSKKKITIKALLLD 177
+ D R+F + T PP+S++GP+ + + +T DE L K +KA LLD
Sbjct: 107 HYADVRKFGTMHAFVKGTEEQRPPLSKVGPEPVGKDRITADELGTRLKKTTRAVKAALLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
QS ++G+GN DE L++A IHP A +L + LL I + +++A++ G S +
Sbjct: 167 QSLVAGLGNIYVDEALFRAGIHPAVPAHTLPDKLIPVLLSAISDTLQEAIDQGGTSIRSY 226
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTT 269
F + R +P + G I GGR T
Sbjct: 227 VNGKGEMGYFQQQLFVYGRTGEPCRKC--GTPISRSVVGGRGT 267
>gi|381182043|ref|ZP_09890867.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeriaceae bacterium TTU M1-001]
gi|380318076|gb|EIA21371.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Listeriaceae bacterium TTU M1-001]
Length = 273
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 30/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + I K+I +I K+I G +F ++G+ + R+GK
Sbjct: 1 MPELPEVENVRRTLSDLVIQKEI-DQVIVSVPKMIVGTEVEEFVHLLIGEKFEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + + M G + +TDE SK++ D EL
Sbjct: 60 FLIFDLTNCSILA-HLRMEGKFRLHN------------ETDEV-SKHTHVIFHFTDQTEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + L+ + I +LGP+ L E F L K IK +LLDQ
Sbjct: 106 RFLDVRKFGTLELIEKHGEDQTRSIQKLGPEPLSELFLKAPFATRLKKTTRAIKTVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
++G+GN ADE+ ++AK+ P + A +L+ + + K ++ +A+++G +
Sbjct: 166 KLVAGVGNIYADEICFRAKVMPNRPANTLTNAEITRIYEATKSIMAEAVKLGGSTIRTYV 225
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
Q+ + + +P + G +I+ + GR T Y P+ QK
Sbjct: 226 NSEGKLGQYQEKLVVYGHNGEPCP--ICGTEIEKMKLNGRGTHYCPKCQK 273
>gi|339624120|ref|ZP_08659909.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Fructobacillus fructosus KCTC 3544]
Length = 276
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G IV+ + KV+ + F+ ++G I R+GK
Sbjct: 1 MPELPEVETVRRGLTNLVKGA-IVRQVDVPYPKVVTS-DLTAFKHDLVGATIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G QY +V+ K+++ L+D +L
Sbjct: 59 YLLFRFSTNETMVSHLRMEG----------QY---SVEPEGAALHKHTETVFHLEDDRQL 105
Query: 121 SFTDKRRFAKVRLL---NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ D RRF ++ L+ ++ +V + +LGP+ E +T+D + K +K+ LLD
Sbjct: 106 FYNDTRRFGRMTLVKTGDEMATVSGLKDLGPEPTEEDLTLDYMKEIFHKSHRVVKSFLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---------- 227
QS I+G+GN ADEVL+ KIHP T LS E A L + I + I +A
Sbjct: 166 QSKIAGLGNIYADEVLWMTKIHPETTTDKLSDEQLAELRQNIIKEINRATAHHGTTVHSF 225
Query: 228 -EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ ++ F + + R K P G + I G R T + P+ Q
Sbjct: 226 SNIFGETGHFQNELQVYGRAKLP--CLRCGTTLQKIKVGQRGTTFCPQCQ 273
>gi|254383290|ref|ZP_04998643.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp.
Mg1]
gi|194342188|gb|EDX23154.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp.
Mg1]
Length = 286
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 117/240 (48%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ I + V DF A + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRTIEDVEVLHPRAVRRHPAGGVDFAARLRGETVGVPQRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD--G 117
K LWL P + G + + G + Q D K+ + V DD G
Sbjct: 61 KYLWL-----PLAGRDLSVLGHLGMSGQLLVQ-------PADAPDEKHLRIRVRFDDAAG 108
Query: 118 LELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE--FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ DE + +L K+ T+K
Sbjct: 109 TELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPL-FDEAAYHLALRAKRSTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A++H + +L++ A LL +++V+ AL VG S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYERPTATLTRPLSAELLGHVRDVMNAALAVGGTS 226
>gi|406995634|gb|EKE14296.1| hypothetical protein ACD_12C00585G0001 [uncultured bacterium]
Length = 292
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 143/309 (46%), Gaps = 52/309 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSIIADDNKVIDGVSASDFEASVLGKAIL 53
MPELPEVE +R + + IGK I K+ + D NKV L I+
Sbjct: 1 MPELPEVETIKRKLAPNIIGKIISEIEILSPKNFVGDKNKV-------------LNHKII 47
Query: 54 SAHRKGKNLWLRLDSPP--------FPSFQFGMTGAI-YIKGVAVTQYKRSA-VKDTDEW 103
S R GK L +L +P + + F ++G I + K V +K + ++
Sbjct: 48 SVDRYGKVLVFQLVNPLTREPNNCLYINIHFKLSGQILFSKNVNHAVFKNIIPFTNGNKM 107
Query: 104 PSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDS 163
P+ ++ ++ DG L F D R+F +++ S P+ G D L + TV+ T
Sbjct: 108 PANTTRVIIKFSDGSGLFFNDLRKFGWIKI-----SDQPLKPKGIDVLDKQFTVNYLTVI 162
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
K + IK LL+DQ I+GIGN A++ L+ A+IHP + + SL+ + L K IK+ I
Sbjct: 163 TKKTRKPIKVLLMDQDLITGIGNIYANDSLFLARIHPQRLSNSLTAQEIKLLYKSIKQTI 222
Query: 224 EKALE----VGADSSQF---------PSNWIFHSREKKPGKAFVDGKK-IDFITAGGRTT 269
L+ GAD + N++ + RE KP ++ K I I GR++
Sbjct: 223 SAGLKDLGSSGADEAFILPDGSRGGHQRNFLVYQREGKPC---LNCKTIIKRIKHNGRSS 279
Query: 270 AYVPELQKL 278
+ P Q+L
Sbjct: 280 FFCPSCQQL 288
>gi|322391813|ref|ZP_08065278.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC
700780]
gi|321145293|gb|EFX40689.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC
700780]
Length = 274
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 137/294 (46%), Gaps = 39/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI +I K+I + +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SNIDIRYPKMIK-IDLYEFKRELPGQVIQSMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F++ DG
Sbjct: 59 YLIFYLSDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHLFIQFTDGGT 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE-------LGPDALLEPMTVDEFTDSLSKKKITIK 172
L + D R+F + LL P + E LGP+ + + F +L K K IK
Sbjct: 104 LVYEDVRKFGTMELL-----APELLETYFLSKKLGPEPTEQDFDLPTFQKALQKSKKPIK 158
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
+ LLDQ+ ++G+GN DEVL++AKIHP + + SL+ + + +V+ +A+E G
Sbjct: 159 SHLLDQTLVAGLGNIYVDEVLWRAKIHPSRLSNSLTAQEARKVHDETIKVLGQAVEKGGS 218
Query: 233 SSQFPSNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+ + +N FH K G+ G I+ I GGR T + P Q+
Sbjct: 219 TIRTYTNAFGEDGTMQEFHQVYDKAGQECSRCGAMIEKIQLGGRGTHFCPTCQR 272
>gi|90961465|ref|YP_535381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
UCC118]
gi|227890555|ref|ZP_04008360.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC
11741]
gi|122449230|sp|Q1WUN7.1|FPG_LACS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|90820659|gb|ABD99298.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
UCC118]
gi|227867493|gb|EEJ74914.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC
11741]
Length = 276
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 26/287 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ + KKI + +++ S+F + K I R+GK
Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIVN--EESEFIEKLTNKTIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M G +++ + K+ + K++ + DG L
Sbjct: 59 YLLFRFSSDLTMISHLRMEGKYFVE---------PSTKEVE----KHTHVVFDFTDGTSL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ + +++LGP+ + V++F+ +L ++K IK LLDQ
Sbjct: 106 RYNDVRKFGRMQLVKTGMEIQTAGLAKLGPEPKEKTFIVEDFSKNLKRRKKAIKNALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------A 231
+ ++G+GN ADEVL+ +KIHP A L++E L I + + A E G
Sbjct: 166 TIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDNIIKELALATEAGGTTIRSYT 225
Query: 232 DSSQFPSNWIF--HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
D+ + + F H+ ++ G I I G R T + P+ Q
Sbjct: 226 DAFRHSGGFQFSLHAYQRTGDPCERCGTPIQRIVVGQRGTHFCPKCQ 272
>gi|307708605|ref|ZP_07645069.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis NCTC
12261]
gi|307615354|gb|EFN94563.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis NCTC
12261]
Length = 274
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I + +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSIEIRYPKMIK-TNLDEFQKEVPGQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFCLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + L D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELFAPDLLEAYFISKKLGPEPSEQEFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTTEEASAIHDQTISVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ G I+ + GGR T + P Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQECARCGTVIEKMQLGGRGTHFCPNCQR 272
>gi|54293547|ref|YP_125962.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila str.
Lens]
gi|81679294|sp|Q5WYY6.3|FPG_LEGPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|53753379|emb|CAH14832.1| hypothetical protein lpl0599 [Legionella pneumophila str. Lens]
Length = 274
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 137/293 (46%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ I+ H G ++ S+ + K+ V + E GK I + R+GK
Sbjct: 1 MPELPEVETTKQGIKPHLEGC-MITSVQVRNQKLRLPVPLNLNELCE-GKHITAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L +D + GM+G + I V+Q P K+ + +++GL L
Sbjct: 59 YILLHMDKG-YLLIHLGMSGHLRI----VSQTAN---------PQKHDHVDLHINNGLAL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ +P P ++ LGP+ L + + + K +IK+ ++D
Sbjct: 105 RFRDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQ 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ GIGN A E L+ AKIHP +A ++ E +L IK+++E A+E G + +
Sbjct: 165 IVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLR---- 220
Query: 240 WIFHSREKKPGK--------------AFVDGKKIDFITAGGRTTAYVPELQKL 278
F+S + KPG V KI+ + GR +A+ P Q +
Sbjct: 221 -DFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPI 272
>gi|241759723|ref|ZP_04757823.1| DNA-formamidopyrimidine glycosylase [Neisseria flavescens SK114]
gi|241319731|gb|EER56127.1| DNA-formamidopyrimidine glycosylase [Neisseria flavescens SK114]
Length = 275
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 128/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GKKI K II + D + G +L+ +R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFK--LRWPIHPDLAQILAGCKVLACNRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + ++ GM+G++ I +A + P K+ DDG L
Sbjct: 59 YLIITFETGIL-LIHLGMSGSLRI---------FTADDERIATPDKHDHLDFVFDDGTVL 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F V P+ E LGP+ L + + L +K +K L+D +
Sbjct: 109 RYHDPRKFGAVLWYEGIAEHHPLLEKLGPEPLSDDFDANYLYQKLKNQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I PL+ A L+K+ A L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFKAGISPLRPANKLTKKEYALLVETVKAVLQRAIETGGSTLRDFVN 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + +SR +P G I T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYSRHNEP--CVQCGGLIFKETLGQRGTFYCPNCQK 275
>gi|422479949|ref|ZP_16556353.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL063PA1]
gi|313825875|gb|EFS63589.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL063PA1]
Length = 256
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LWL LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWLILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V+ +A+ G S
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTS 224
>gi|325570070|ref|ZP_08145995.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus
ATCC 12755]
gi|325156898|gb|EGC69069.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus
ATCC 12755]
Length = 280
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 32/293 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ + K I +S+ ++I+ F A + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVLNKTI-ESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G +YK ++D K++ DG +L
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG----KYKYF---ESDPIVDKHTHVIFHFTDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F ++ L++ S I +LGP+ E ++ F L + K IK LLLDQ
Sbjct: 106 NYHDVRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
++G+GN DE L+QAKIHP Q A SL L + I +V+E+++E G
Sbjct: 166 KLVTGLGNIYVDEALWQAKIHPEQPADSLMPTEVDVLHEAIIDVLERSVEAGGTTIRTYL 225
Query: 231 ---ADSSQFPSNWIFHSREKKP-GKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
++ +F + + + P G+ G I I R T + P+ QKL+
Sbjct: 226 NALGEAGKFQMSLNVYGQTGNPCGRC---GTPIVKIKVAQRGTHFCPQCQKLH 275
>gi|300788843|ref|YP_003769134.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
U32]
gi|384152309|ref|YP_005535125.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
S699]
gi|399540724|ref|YP_006553386.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
S699]
gi|299798357|gb|ADJ48732.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
U32]
gi|340530463|gb|AEK45668.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
S699]
gi|398321494|gb|AFO80441.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei
S699]
Length = 257
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 28/277 (10%)
Query: 7 VEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLRL 66
+E AR+ + +G+KI +S+ D+ V + D ++ G + AHR+GK LW
Sbjct: 1 MELARQVLAG-ALGRKI-RSVDDHDDWVCRPHAPGDIATALRGGRLTEAHRRGKTLWCET 58
Query: 67 ---DSPPFPSF--QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELS 121
D P P+ GM G + G + + ++D DE P ++ +F + DG +L
Sbjct: 59 EGGDGRPGPNLGLHLGMAGQLRFAGESGPPGR---IRDRDEKP-EWFRFGITFADGEQLR 114
Query: 122 FTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYI 181
D RR ++VRL P + LGPDA ++ +F + + + + +KA LLDQS +
Sbjct: 115 LFDTRRLSRVRL------DPDLDALGPDA--GEISRRDFAERVGRGRAPLKARLLDQSVV 166
Query: 182 SGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNWI 241
+GIGN +ADE L+QA + P + +S + L K +++ + A+ G + I
Sbjct: 167 AGIGNLLADETLWQAALSPARPVHEMSSDDLGHLHKALRKALRAAIRHGGVHT---GEII 223
Query: 242 FHSR--EKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
H R E P G ++ T GGR+T + + Q
Sbjct: 224 GHRRAGEHCP----RCGAEMSHGTVGGRSTWWCSKEQ 256
>gi|126434518|ref|YP_001070209.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. JLS]
gi|166215636|sp|A3PXU1.1|FPG_MYCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|126234318|gb|ABN97718.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
site) lyase [Mycobacterium sp. JLS]
Length = 296
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 114/258 (44%), Gaps = 34/258 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60
Query: 60 KNLWLRLDSPPFP-----------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K LWL LD P GM+G + + + + R A
Sbjct: 61 KYLWLTLDGGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAAL---------- 110
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F L + D T VP P++ + D L D
Sbjct: 111 -----LDDGTALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKV 165
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
L K IK LLDQ+ +SGIGN ADE L++AK++ + A SL+K A +L +V+
Sbjct: 166 LRGKHSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVM 225
Query: 224 EKALEVGADSSQFPSNWI 241
AL G + F S ++
Sbjct: 226 RDAL--GQGGTSFDSLYV 241
>gi|443626249|ref|ZP_21110677.1| putative Formamidopyrimidine-DNA glycosylase [Streptomyces
viridochromogenes Tue57]
gi|443340309|gb|ELS54523.1| putative Formamidopyrimidine-DNA glycosylase [Streptomyces
viridochromogenes Tue57]
Length = 268
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 24/279 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE R ++ C ++++ + D V+ GVSA ++ G+ I A R+GK
Sbjct: 1 MPELPDVEGFRNVLQS-CAQGRVIRRVEVRDTGVLHGVSAPRLRDALEGRRITRAERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L P + FGMTG + A D P F V D +L
Sbjct: 60 WLLAHTGGPTL-ALHFGMTGRLL-----------CAHPDDAADPHDRVLFTVARDR--QL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVD--EFTDSLSKKKITIKALLLD 177
+ D+R+ + L + + + + GPDAL TVD EF +L+ + +KA+L+D
Sbjct: 106 RYRDQRKLQGLWLAENHSDIARLLRNQGPDAL----TVDREEFETALASHRGRVKAVLID 161
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
QS ++G+GN +ADE+L++A + P A +L++ L ++ + A+ G
Sbjct: 162 QSVLAGLGNLLADEILWRAGLRPTTPANALTEPERRRLYTQMRRTLRPAVTAGRVPPH-- 219
Query: 238 SNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
W+ R+ + GGRTT + P Q
Sbjct: 220 PTWLTGHRDNPNPHCPRCHTPLRRSRVGGRTTVWCPTCQ 258
>gi|389856233|ref|YP_006358476.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST1]
gi|403061868|ref|YP_006650084.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus suis S735]
gi|353739951|gb|AER20958.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST1]
gi|402809194|gb|AFR00686.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus suis S735]
Length = 275
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 128/282 (45%), Gaps = 37/282 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I K + + G A+ F ++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTG--ATVFCQDLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWPS-KYSKFFVELDD 116
L IY+ + + R K D+ P+ K+ F D
Sbjct: 59 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSD 100
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++EF L+K + IK+
Sbjct: 101 GSTLVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKQLAKSRKPIKSH 160
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS ++G+GN DEVL++A++HP Q + LS E A L + EV++ +E G +
Sbjct: 161 LLDQSLVAGLGNIYVDEVLFRAQVHPAQASNQLSAEQAADLRQATIEVLQLGIEKGGSTI 220
Query: 235 QFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ N + +DG D++ G+T P Q
Sbjct: 221 RTYKNAL-----------GMDGTMQDYLQVYGKTGQACPRCQ 251
>gi|344198757|ref|YP_004783083.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrivorans
SS3]
gi|343774201|gb|AEM46757.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrivorans
SS3]
Length = 270
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 29/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H +G+++ +++ D + +D V G+ +LS R+GK
Sbjct: 1 MPELPEVEVTRLGIAPHLLGQRLEGAVVRDGRLRLP--VNADLAGRVAGQRLLSLRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L+ GM+G + + + + V+ D ++ D L L
Sbjct: 59 YLLLDLEQGTI-LIHLGMSGHLRVLP------QSTPVQKHDHVDLLFA-------DDLCL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D RRF V L DP P + LGP+ L + T + +++ IK+ L+D
Sbjct: 105 RFHDPRRFGAVCWLADPDQHPFLRHLGPEPLGDDFTAEYLYQRSRSRQVPIKSFLMDAHI 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ----- 235
+ G+GN A+E L+ A I P + A ++ + L++ +++++E A+ G + +
Sbjct: 165 VVGVGNIYANESLFAAGIDPRRHAGMIALQRYGKLVQTVRDILEAAIAQGGTTLRDFTRP 224
Query: 236 ------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE +P G + I GR T Y Q+
Sbjct: 225 DGRNGYFRLSLAVYGREGEPCTQC--GALLHGIRISGRATTYCSHCQR 270
>gi|418130133|ref|ZP_12767017.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA07643]
gi|418186980|ref|ZP_12823509.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47360]
gi|418229715|ref|ZP_12856321.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
EU-NP01]
gi|419477634|ref|ZP_14017459.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA18068]
gi|421270569|ref|ZP_15721425.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SPAR48]
gi|353803425|gb|EHD83717.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA07643]
gi|353852805|gb|EHE32791.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47360]
gi|353889621|gb|EHE69391.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
EU-NP01]
gi|379567016|gb|EHZ32003.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA18068]
gi|395868364|gb|EJG79482.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SPAR48]
Length = 274
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLSQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|403070338|ref|ZP_10911670.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Oceanobacillus sp. Ndiop]
Length = 275
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + +E + K I + + N + F+ + G+ R+GK
Sbjct: 1 MPELPEVETIKNTLERFILDKTIKQVDVYWPNIIKKPDDTEQFKMMLQGQRFRKLSRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G + AV + E K++ DG EL
Sbjct: 61 FLLFYLDD-------YVLISHLRMEG-------KYAVHRSIEPVKKHTHVIFTFTDGEEL 106
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + P+++LGPD + T D F L K + IK+ LLDQ
Sbjct: 107 RYNDVRKFGTMHVFQKGEEFQNKPLNQLGPDPFDDAFTFDYFYQKLKKTERFIKSALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSK--------ESCATLLKCIK---EVIEKAL 227
+ ++G+GN DE L+++ +HPL+ A L+K ++ ATL ++ I +
Sbjct: 167 TIVTGLGNIYVDETLFKSGVHPLKRASKLTKKEIKLIQEQAIATLKDAVRAGGTTIRSYV 226
Query: 228 EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D F + +++KP K G +I + GGR T P QK
Sbjct: 227 NSQGDMGMFQQELFVYGQDQKPCKN--CGTEITKMKVGGRGTHICPTCQK 274
>gi|387891149|ref|YP_006321447.1| formamidopyrimidine DNA glycosylase [Escherichia blattae DSM 4481]
gi|414594504|ref|ZP_11444140.1| formamidopyrimidine-DNA glycosylase [Escherichia blattae NBRC
105725]
gi|386925982|gb|AFJ48936.1| formamidopyrimidine DNA glycosylase [Escherichia blattae DSM 4481]
gi|403194499|dbj|GAB81792.1| formamidopyrimidine-DNA glycosylase [Escherichia blattae NBRC
105725]
Length = 269
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 128/288 (44%), Gaps = 30/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE + +G+ I+ I + ++ VS + + S K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILH-IEIRNGRLRWPVSEALYALS--DKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I A K V + L +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSVRILPDAPAAGKHDHVD-------------LVLSNGTVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + P ++ LGP+ L E T S ++KKI +K L+D
Sbjct: 104 RYTDPRRFGAWLWARSLENHPVLAHLGPEPLSEDFTGAYLHASGARKKIAVKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------- 233
+ G+GN A E L+ A IHP + A SLS C L + IK V+++++ G +
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRAAQSLSVAECERLAQEIKTVLQRSIAQGGTTLKDFLQS 223
Query: 234 ----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P + V G I G R T Y Q
Sbjct: 224 DGKPGYFAQELQVYGREGEPCR--VCGTAISATKHGQRRTFYCRHCQH 269
>gi|417850211|ref|ZP_12496125.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis SK1080]
gi|339455054|gb|EGP67665.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis SK1080]
Length = 274
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I + +F+ V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYPKMIK-MDLDEFQKKVPGQVVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ ++ +DG
Sbjct: 59 YLIFYLTDTVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVLIQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D V IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLEVYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAAEVTAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ G I+ I GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQECSRCGTIIEKIQLGGRGTHFCPQCQR 272
>gi|417923264|ref|ZP_12566733.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis SK569]
gi|342837068|gb|EGU71267.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis SK569]
Length = 274
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I +F V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYPKMIK-TDLDEFRKEVPGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLIFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + V F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFLSKKLGPEPSKQDFDVQVFQAALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARLSQTLTSAEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ G I+ I GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQECSRCGTIIEKIQLGGRGTHFCPQCQR 272
>gi|325283264|ref|YP_004255805.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP]
gi|324315073|gb|ADY26188.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP]
Length = 271
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 135/299 (45%), Gaps = 50/299 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I G+ IV K D A G+ +L R+GK
Sbjct: 1 MPELPEVETTRRKIAPLVTGRTIVDIRHLSPKKYPDTGLAH-------GRTVLEPQRRGK 53
Query: 61 NLWLRLDSPPFPS------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L L L P + GMTG + +E P +++ ++L
Sbjct: 54 YLILPLAQGPDAAPDRELIVHLGMTGGFRL----------------EEGP--HTRLTLQL 95
Query: 115 DDGLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
D G EL F D RRF +VR++ D ++P ++ +GP+ L + + E + K +K
Sbjct: 96 DSG-ELHFNDPRRFGRVRVVQAGDYAALPTLAAMGPEPLEDSFEL-EAFAQAAAKAGAVK 153
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LL Q ++G+GN ADE L++A+IHP Q LS E A L ++EV+ +A+E+G
Sbjct: 154 PWLLSQRPVAGVGNIYADEALWRARIHPAQR--HLSAEQAARLHAAVREVMREAVELGGS 211
Query: 233 S--------SQFPSNW----IFHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQKL 278
S Q +W + H+ + G+ G I+ G R T + P+ Q L
Sbjct: 212 SLGNGVSNYRQHDGDWGGFQLQHAAYGRGGQPCPRCGTTIEKTVLGQRGTHFCPQCQVL 270
>gi|384176497|ref|YP_005557882.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349595721|gb|AEP91908.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
Length = 276
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 126/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I I N + +F ++ G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + +E K+ + DG +L
Sbjct: 61 FLLFHLD-------HYVMISHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDGTQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A +HP A LS ++ TL IK +++A++ G +
Sbjct: 167 KTVVGLGNIYVDEALFRAGVHPEIKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + + QK
Sbjct: 227 NSQGEIGMFQLQHFVYGKKDEPCKNC--GTMISKIVVGGRGTHFCAKCQK 274
>gi|289167814|ref|YP_003446083.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis B6]
gi|288907381|emb|CBJ22218.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis B6]
Length = 274
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I +F V G+ + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSIEIRYPKMIK-TDLDEFRKEVPGQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQAFQTALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A+++P + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVYPARPSQTLTAEEMTAIRDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K GK G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGKECSRCGTLIEKIQLGGRGTHFCPNCQR 272
>gi|401678167|ref|ZP_10810135.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter sp. SST3]
gi|400214535|gb|EJO45453.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter sp. SST3]
Length = 269
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRL---RWPVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ + T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRVL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDAFNAEYLKAKCAKKKSPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCR--VCGTPIIATKHAQRATFYCRQCQK 269
>gi|387626323|ref|YP_006062498.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
INV104]
gi|417693890|ref|ZP_12343079.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47901]
gi|418189206|ref|ZP_12825721.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47373]
gi|444382164|ref|ZP_21180368.1| DNA-formamidopyrimidine glycosylase [Streptococcus pneumoniae
PCS8106]
gi|444384808|ref|ZP_21182899.1| DNA-formamidopyrimidine glycosylase [Streptococcus pneumoniae
PCS8203]
gi|301794108|emb|CBW36514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
INV104]
gi|332204973|gb|EGJ19038.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47901]
gi|353856348|gb|EHE36317.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47373]
gi|444251568|gb|ELU58037.1| DNA-formamidopyrimidine glycosylase [Streptococcus pneumoniae
PCS8203]
gi|444253124|gb|ELU59583.1| DNA-formamidopyrimidine glycosylase [Streptococcus pneumoniae
PCS8106]
Length = 274
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRCLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLSQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQGCVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|260663491|ref|ZP_05864381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum
28-3-CHN]
gi|260552032|gb|EEX25085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum
28-3-CHN]
Length = 279
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 130/293 (44%), Gaps = 34/293 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + G++I K I + K I+ +F +++G+ I R+GK
Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQI-KGIDVNYGKTIEN-DVEEFRQALIGQTIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M + ++G Q + V K++ DG +L
Sbjct: 59 YLLFRFSN------DLTMVSHLRMEGSYFNQPTSAEV-------DKHTHVIFHFTDGTDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ E D F L K + IK LLDQ
Sbjct: 106 CYRDTRKFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL----------- 227
S+++G+GN ADEVL+Q +I+P Q A SL+ + L + I I +A
Sbjct: 166 SHVAGLGNIYADEVLWQTQINPEQPANSLTDDQIKRLRENIIAEIARATAGHGTTVHTFK 225
Query: 228 EVGADSSQFPSNW--IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
D+ QF + HS + P G K+ I R T + P Q L
Sbjct: 226 NAFGDAGQFQNELQAYGHSGDACPRC----GTKLVKIKVAQRGTTFCPHCQAL 274
>gi|392948607|ref|ZP_10314214.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pentosus KCA1]
gi|392436169|gb|EIW14086.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus pentosus KCA1]
Length = 274
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 44/298 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDN----KVIDGVSASDFEASVLGKAILSA 55
MPELPEVE RR + ++VK + IAD + K+I+ + F+ ++ + I +
Sbjct: 1 MPELPEVETVRRGL------NRLVKGATIADIDVYWPKIINN-DVALFKERLINQTIQTI 53
Query: 56 HRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
R+GK L R F G+T +++ + V E K++ L
Sbjct: 54 DRRGKYLLFR--------FSNGLTMVSHLR-----MEGKYNVVPRGEARDKHTHVVFHLT 100
Query: 116 DGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
D +L + D R+F ++ L+ + SV + +GP+ + + +T+ T + K IK
Sbjct: 101 DDRDLLYNDTRKFGRMTLVPTGEELSVAGLRTIGPEPVADQLTLAYLTATFEHSKKMIKP 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV---- 229
LLLDQS I+GIGN ADE L+ +KIHP++ A SL+ + ATL I + E AL +
Sbjct: 161 LLLDQSKIAGIGNIYADETLWMSKIHPMRPANSLTADEIATLRDNI--ITEMALAIKGHG 218
Query: 230 ---------GADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
++ QF ++ + RE +P + G I+ I R T + P Q+L
Sbjct: 219 TTVHSFSTAFGEAGQFQNHLHVYGREGQPCERC--GTMIEKIKVAQRGTHFCPLEQRL 274
>gi|257875614|ref|ZP_05655267.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC20]
gi|257809780|gb|EEV38600.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC20]
Length = 280
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 17/235 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ + K I +S+ ++I+ F A + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVLNKTI-ESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G + ++D K++ DG +L
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG-------KYEYFESDPIVDKHTHVIFHFTDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F ++ L++ S I +LGP+ E ++ F L + K IK LLLDQ
Sbjct: 106 NYHDVRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
++G+GN DE L+QAKIHP Q A SL+ L + I +V+E+A+E G +
Sbjct: 166 KLVTGLGNIYVDEALWQAKIHPEQPADSLTPAEANVLHQAIIDVLERAVEAGGTT 220
>gi|169833803|ref|YP_001694415.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
Hungary19A-6]
gi|168996305|gb|ACA36917.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
Hungary19A-6]
Length = 285
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 12 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 69
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 70 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 114
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 115 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 174
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 175 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLSQAVEKGGSTIRTY 234
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR+T + P Q+
Sbjct: 235 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRSTHFCPNCQR 283
>gi|406997588|gb|EKE15618.1| hypothetical protein ACD_11C00116G0005 [uncultured bacterium]
Length = 298
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 25/300 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIV-------KSI-IADDNKVIDGVSASDFEASVLGKAI 52
MPELPEV+ + G IV KSI IA + KV S ++ E + + I
Sbjct: 1 MPELPEVQTIVDDLNRKIKGDVIVGFWSDWLKSIKIARNGKVSLAASQNEVEKEIANRKI 60
Query: 53 LSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT-DEWPSKYSKFF 111
L A R GKN+++ L MTG + IK ++ K++ KD + ++Y
Sbjct: 61 LQAWRIGKNMFIDLSGGKTIYIHLKMTGHLLIKKETESRKKKATKKDYFKDKVNQYIHHI 120
Query: 112 VELDDGLELSFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKK-K 168
L G+ L F+D R+FAK+ L++ + I +LG DA+ T+ +F + L KK +
Sbjct: 121 WYLKSGITLEFSDLRKFAKIVLVDTDKIKDLAEIKKLGVDAMSPEFTLKKFKEILGKKSR 180
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
I +L++Q I+GIGN E+L++A I+P + SL+ E + K IK++++ A++
Sbjct: 181 APIGIVLMEQELIAGIGNIYRSEILFRAGINPQRKISSLTAEEIKEIYKNIKKILKLAIK 240
Query: 229 VGA-------DSSQFPSNW----IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ DS P N+ +++E +P K G I G R+ + P+ QK
Sbjct: 241 LRGTSDSDYRDSDGAPGNFQKVLRVYNKENEPCKKC--GTIIKRFKMGQRSVFHCPQCQK 298
>gi|419844015|ref|ZP_14367320.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC
700779]
gi|385702439|gb|EIG39584.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC
700779]
Length = 274
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 39/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI +I K+I +F+ + G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SNIDIRYPKMIK-TDLDEFQKEMPGQVIQTMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ + +DG
Sbjct: 59 YLLFYLSDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVLIHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE-------LGPDALLEPMTVDEFTDSLSKKKITIK 172
L + D R+F + LL P + E LGP+ + + F +L K K TIK
Sbjct: 104 LVYEDVRKFGTMELL-----APELLEAYFISKKLGPEPTEKDFDLGSFKLALKKSKKTIK 158
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
+ LLDQ+ ++G+GN DEVL++AK+HP +T+ SL+ + + V+ +A+E G
Sbjct: 159 SHLLDQTLVAGLGNIYVDEVLWRAKVHPSRTSNSLTAQEARKVHDETINVLGQAVEKGGS 218
Query: 233 SSQFPSNWI--------FHSREKKPGKAFVDGKK-IDFITAGGRTTAYVPELQK 277
+ + +N FH K G+A + I+ I GGR T + P+ Q+
Sbjct: 219 TIRTYTNAFGEDGTMQEFHQVYDKAGQACSRCETIIEKIQLGGRGTHFCPKCQR 272
>gi|333024193|ref|ZP_08452257.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp.
Tu6071]
gi|332744045|gb|EGJ74486.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp.
Tu6071]
Length = 284
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 134/296 (45%), Gaps = 35/296 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ + + + V ++ DF A + G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHLAGGEDFAARLKGRTFATPRRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + ++ A + V+ + +D L
Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPAERHLRVR-------------IGFEDAL 107
Query: 119 --ELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L P I+ + D L +P+ D F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHETGEGGVPDVIAHIARDPL-DPLFDDAAFHAALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG--- 230
LLDQS ISG+GN ADE L++A++H + L++ LL +++V+ AL VG
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTAGLTRPRTDELLGHVRDVMNAALAVGGTS 226
Query: 231 ---------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+S F + + RE +P + G I R++ Y P+ Q+
Sbjct: 227 FDSLYVNVNGESGYFDRSLDAYGREGEPCRRC--GTPIQRDAWMNRSSYYCPKCQR 280
>gi|443623853|ref|ZP_21108341.1| putative Formamidopyrimidine-DNA glycosylase [Streptomyces
viridochromogenes Tue57]
gi|443342634|gb|ELS56788.1| putative Formamidopyrimidine-DNA glycosylase [Streptomyces
viridochromogenes Tue57]
Length = 286
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ A DF + G + + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRSVADAEVLHPRAVRRHIAGADDFAHRLKGHRVGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD-- 116
K LWL L D+ GM+G + ++ DE K+ + V D
Sbjct: 61 KYLWLPLEDTNQSILAHLGMSGQLLVQPHTAP----------DE---KHLRIRVRFADVL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPEGLPDVIAHIARDPL-DPLFDDEGFHQALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++ ++H + + ++ LL +++V+ AL VG S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRTRLHYDRPTATFTRPRTLELLGHVRDVMNAALAVGGTS 226
>gi|428772002|ref|YP_007163790.1| DNA-(apurinic or apyrimidinic site) lyase [Cyanobacterium stanieri
PCC 7202]
gi|428686281|gb|AFZ46141.1| DNA-(apurinic or apyrimidinic site) lyase [Cyanobacterium stanieri
PCC 7202]
Length = 276
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 134/291 (46%), Gaps = 31/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + I + + + S + FE + GK I+ HR+GK
Sbjct: 1 MPELPEVETVCRGLNKTTSALIIKSARVLLPRTLAYPDSIASFEQGIAGKKIIQWHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L S + MTG + + V Q D K+++ + D+G EL
Sbjct: 61 YLLAQL-SRGWLGVHLRMTGQL----LWVNQ---------DSALQKHTRVRLFFDEGKEL 106
Query: 121 SFTDKRRFAKVRLL-NDP---TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F D R F K L ND T V + +LG + T+ F + L K + IK LLL
Sbjct: 107 RFVDTRTFGKFWWLENDSPPETVVTGLQKLGVEPFSPQFTIQYFQEKLKKSRRNIKTLLL 166
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-SQ 235
DQS ++G+GN ADE L+++ I P + +L L I EV++ +++ G S S
Sbjct: 167 DQSVVAGVGNIYADEALFKSGIMPNTISGNLKLPQIEKLRTAIIEVLDDSIKAGGTSFSD 226
Query: 236 FPSNWIFHSREKKPGKAFVDGKK----------IDFITAGGRTTAYVPELQ 276
F I GKA+V G+K ID + GGR+T + P+ Q
Sbjct: 227 FLH--ITGVNGNYAGKAWVYGRKGEPCRICSTPIDKMKLGGRSTHFCPQCQ 275
>gi|307127479|ref|YP_003879510.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
670-6B]
gi|418132812|ref|ZP_12769685.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA11304]
gi|421233958|ref|ZP_15690580.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2061617]
gi|421249265|ref|ZP_15705727.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2082239]
gi|306484541|gb|ADM91410.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
670-6B]
gi|353806768|gb|EHD87041.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA11304]
gi|395602855|gb|EJG62997.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2061617]
gi|395614566|gb|EJG74585.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2082239]
Length = 274
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A+IHP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQIHPARSSQTLTAEEATAIHDQTIAVLSQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|78044278|ref|YP_360470.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101299|sp|Q3ABL4.3|FPG_CARHZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|77996393|gb|ABB15292.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 263
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + +GK I + + K+I VS +F V+GK I++ R+GK
Sbjct: 1 MPELPEVETIKRTLAPKILGKTIYRVEVYLP-KIIKNVSVEEFTRRVVGKEIVALKRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L + MTG + I + + KD K++ +L D LEL
Sbjct: 60 YLLIDLSGKETVTVHLRMTGKLLI-------LPKGSPKD------KHTHAIFDLGD-LEL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKI-----TIKALL 175
F D R+F + E+GP EP+ DEFT K K+ +KA+L
Sbjct: 106 HFNDIRQFGGFSF--------EMPEIGP----EPLE-DEFTPEYLKTKLKASQKNLKAVL 152
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE------- 228
LDQ I+GIGN ADE+L++A + P + A SLS++ L K I++++ +E
Sbjct: 153 LDQKIIAGIGNIYADEILFEAGLSPKRIAASLSEDEAEELFKAIRKILALGIEYRGTSIR 212
Query: 229 --VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
V A++ Q + K + GR+T Y P QK
Sbjct: 213 DYVDAENQQGSFQRLLKVYGKNGSLCVRCNNVLIRERHAGRSTHYCPHCQK 263
>gi|398782207|ref|ZP_10546025.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces auratus AGR0001]
gi|396996944|gb|EJJ07923.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces auratus AGR0001]
Length = 308
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 23/253 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ I + + + A+DF A + G I +A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTIDAVEVHHPRSIRRHTAGAADFAARLKGLRIGAARRRG 60
Query: 60 KNLWLRLDS--PPFPSFQFGMTGAI---YIKGVAVTQY----KRSAVKDTDEWPSKYSKF 110
K LWL + P + G++ + G+A+ + + V+ K+ +
Sbjct: 61 KYLWLPVTGGGPASQTAAEGISPMVTPSVTHGLAILAHLGMSGQLLVQPEGAPDEKHLRI 120
Query: 111 FVELDDGL--ELSFTDKRRFAKVRLLNDPTSVPPISELGPDAL-------LEPMTVDE-F 160
V DD L EL F D+R F + L + +VP ++ PD + L+P D F
Sbjct: 121 RVRFDDALGTELRFVDQRTFGGLSLHD---TVPGAADHLPDVIAHIARDPLDPAFDDAAF 177
Query: 161 TDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIK 220
D+L +++ TIK LLDQ+ ISG+GN ADE L+++++H + + ++ A LL ++
Sbjct: 178 HDALRRRRTTIKRALLDQTLISGVGNIYADEALWRSRLHYERPTATFTRPRTAELLGHVR 237
Query: 221 EVIEKALEVGADS 233
+V+ AL VG S
Sbjct: 238 DVMNAALAVGGTS 250
>gi|429088712|ref|ZP_19151444.1| Formamidopyrimidine-DNA glycosylase [Cronobacter universalis NCTC
9529]
gi|426508515|emb|CCK16556.1| Formamidopyrimidine-DNA glycosylase [Cronobacter universalis NCTC
9529]
Length = 269
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLRDKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS++ C L + IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTT 216
>gi|451967207|ref|ZP_21920452.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda NBRC
105688]
gi|451313925|dbj|GAC65814.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda NBRC
105688]
Length = 269
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 36/291 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR I H GK ++ ++ +++ V + ++ + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIAPHLTGK-MIDRLVVRQSRLRWPVPEALL--ALHDRPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I + K + + L DG+ L
Sbjct: 58 YLLLELPEG-WIVIHLGMSGSVRILSASTPAQKHDHID-------------LRLTDGMCL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF D + ++ LGP+ L + + ++ +K L+D
Sbjct: 104 RYTDPRRFGAWLWYEDLATASVLAHLGPEPLSDAFNAAYLLEKARGRRTAVKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
+ G+GN A E L+ A+IHP + A SLS++ A L++ IK V++++++ G + +
Sbjct: 164 VVGVGNIYASESLFSAQIHPDRLAGSLSRDEIALLVQTIKAVLQRSIDQGGTTLR----- 218
Query: 241 IFHSREKKPG--------------KAFVDGKKIDFITAGGRTTAYVPELQK 277
F + KPG G I G RTT Y P Q+
Sbjct: 219 DFLQADGKPGYFAQQLQVYGRAGEACLTCGTTIKSSKHGQRTTYYCPHCQR 269
>gi|322387709|ref|ZP_08061318.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC
700779]
gi|321141576|gb|EFX37072.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC
700779]
Length = 288
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 39/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI +I K+I +F+ + G+ I + R+GK
Sbjct: 15 MPELPEVETVRRGLEKLILGKKI-SNIDIRYPKMIK-TDLDEFQKEMPGQVIQTMGRRGK 72
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ + +DG
Sbjct: 73 YLLFYLSDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVLIHFEDGGT 117
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISE-------LGPDALLEPMTVDEFTDSLSKKKITIK 172
L + D R+F + LL P + E LGP+ + + F +L K K TIK
Sbjct: 118 LVYEDVRKFGTMELL-----APELLEAYFISKKLGPEPTEKDFDLGSFKLALKKSKKTIK 172
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
+ LLDQ+ ++G+GN DEVL++AK+HP +T+ SL+ + + V+ +A+E G
Sbjct: 173 SHLLDQTLVAGLGNIYVDEVLWRAKVHPSRTSNSLTAQEARKVHDETINVLGQAVEKGGS 232
Query: 233 SSQFPSNWI--------FHSREKKPGKAFVDGKK-IDFITAGGRTTAYVPELQK 277
+ + +N FH K G+A + I+ I GGR T + P+ Q+
Sbjct: 233 TIRTYTNAFGEDGTMQEFHQVYDKAGQACSRCETIIEKIQLGGRGTHFCPKCQR 286
>gi|145224770|ref|YP_001135448.1| formamidopyrimidine-DNA glycosylase [Mycobacterium gilvum PYR-GCK]
gi|315445100|ref|YP_004077979.1| bifunctional DNA-(apurinic or apyrimidinic site)
lyase/formamidopyrimidine-DNA glycosylase [Mycobacterium
gilvum Spyr1]
gi|189044665|sp|A4TE57.1|FPG_MYCGI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|145217256|gb|ABP46660.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium gilvum
PYR-GCK]
gi|315263403|gb|ADU00145.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA
glycosylase [Mycobacterium gilvum Spyr1]
Length = 282
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 108/239 (45%), Gaps = 21/239 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H G+ I + V + +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTISAVRVHHPRAVRRHEAGPADLTARLLDSVITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + + V + R AV LDDG
Sbjct: 61 KYLWLTLGDGSAVVVHLGMSGQMLLGPVRNENHLRIAVL---------------LDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F L + D + VP P++ + D L + L +K IK
Sbjct: 106 LSFVDQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRAAVVNVLRRKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L++AKI+ + A +SK A LL +V+ AL G S
Sbjct: 166 LLDQTVVSGIGNIYADESLWRAKINGARLASGVSKAKLAELLDAATDVMTDALAQGGTS 224
>gi|403237756|ref|ZP_10916342.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus sp. 10403023]
Length = 279
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 31/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + GK I K + + F ++ G+ I + R+GK
Sbjct: 1 MPELPEVETVRRTLTQLVNGKTIEKVTVLWPKMIKKPEEPEQFCDALRGQTIHNVDRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD F + + ++G R + D DE K++ D EL
Sbjct: 61 FLKFILDD-------FCLVSHLRMEG-------RYGLYDKDEPYDKHTHVLFTFTDDSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ + T+ + LS+ IK LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKKGEEEDSLPLSQLGPEPFSQEFTLTYLEEKLSRTNRKIKVALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ + G+GN DE L++A I+P + + +L+K+ L I + + +A+E G + +
Sbjct: 167 TNVVGLGNIYVDEALFRAGIYPERESNTLTKKEIKKLHHEIIQTLNEAVEKGGSTIRSYV 226
Query: 239 N------------WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
N +++ K K G +I+ GGR T Y P+ QK
Sbjct: 227 NTQGEIGMFQLQLFVYGQNGKACQKC---GTEIEKTVVGGRGTHYCPKCQK 274
>gi|401761655|ref|YP_006576662.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400173189|gb|AFP68038.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 269
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRL---RWPVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I T+E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------TEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELDGHNVLAHLGPEPLSDAFNAEYLKAKCAKKKSPIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS + C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G + R T Y + QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCR--VCGTPVIATKHAQRATFYCRQCQK 269
>gi|149002521|ref|ZP_01827455.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP14-BS69]
gi|237650881|ref|ZP_04525133.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CCRI
1974]
gi|237821332|ref|ZP_04597177.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CCRI
1974M2]
gi|418143782|ref|ZP_12780582.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13494]
gi|419457352|ref|ZP_13997297.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA02254]
gi|147759458|gb|EDK66450.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP14-BS69]
gi|353809523|gb|EHD89783.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13494]
gi|379532350|gb|EHY97579.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA02254]
Length = 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVTGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLNQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|395243791|ref|ZP_10420770.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus hominis CRBIP
24.179]
gi|394483841|emb|CCI81778.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus hominis CRBIP
24.179]
Length = 276
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 122/294 (41%), Gaps = 40/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKS-------IIADDNKVIDGVSASDFEASVLGKAIL 53
MPE+PEVE RR +E GK I K I+ D KV D + K IL
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKTIKKVTVWYPKIIMGDSQKVADRLQ---------NKTIL 51
Query: 54 SAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
R GK L +RL M G R KDT + ++ +F
Sbjct: 52 GIDRYGKYLLIRLSDDLTLVSHLRMEGKY-----------RLVAKDTPKQKHEHVQFL-- 98
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
DDG L + D R+F ++ L+ T I LGP+ T + L+KKK I
Sbjct: 99 FDDGTALRYDDVRKFGRMHLVETGTERQTTGIRHLGPEPNSSEFTFNYLKGQLAKKKKNI 158
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-G 230
K +LDQS + G+GN DEVL+Q+KIHPL T + + L I IE A E+ G
Sbjct: 159 KTSILDQSIVCGLGNIYVDEVLWQSKIHPLSTPAKIPVKQVKVLYDSINATIENATELRG 218
Query: 231 ADSSQFP----SNWIFHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQ 276
F + R + G A + G ++ I GR T + P Q
Sbjct: 219 TTVHTFLDADGMMGGYQDRLQVYGHAGQECPRCGTILEKIKVNGRGTTFCPHCQ 272
>gi|421544588|ref|ZP_15990664.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM140]
gi|421546703|ref|ZP_15992748.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM183]
gi|421548955|ref|ZP_15994979.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM2781]
gi|421552906|ref|ZP_15998878.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM576]
gi|421561366|ref|ZP_16007214.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM2657]
gi|254670484|emb|CBA06192.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
alpha153]
gi|402322948|gb|EJU58398.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM183]
gi|402323779|gb|EJU59221.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM140]
gi|402325634|gb|EJU61043.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM2781]
gi|402330085|gb|EJU65434.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM576]
gi|402338829|gb|EJU74059.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM2657]
Length = 275
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPYRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPQC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|452076868|gb|AGF92844.1| DNA-formamidopyrimidine glycosylase [uncultured organism]
Length = 264
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELP+VE RR E+ GK I +++ V+ V ++ E ++ G+ S+ R GK
Sbjct: 1 MPELPDVEVFRRFFEKKGKGKTI-EAVEVRSEAVLGDVEPAELENALRGQRFTSSVRHGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAI-YIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
+L + + + FGMTG Y + AV + + FF DG
Sbjct: 60 HLIIGTSGNNWLAVHFGMTGFFDYTESSAVEEGHPRVI------------FF--FRDGSG 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L + +R+ ++ L+ +P S LGPDAL + F S + +K+ +DQ
Sbjct: 106 LIYDCQRKLGEINLVQNPDSWVKEKGLGPDAL-SGFDRETFGKVFSGSRAMVKSTFMDQG 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
I+G+GN +DE+LY A IHP A L++ L + + V+++A++ D + P +
Sbjct: 165 KIAGVGNVYSDEILYHAGIHPRVKASDLTERRIDDLYEKTRVVLKEAIDKEVDPEKLPED 224
Query: 240 WIFHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQ 276
++ R PG G +I+ + GR+ + P Q
Sbjct: 225 YLLTHR--SPGSNCPKCGGEIEKVKVSGRSAYFCPNCQ 260
>gi|389879418|ref|YP_006372983.1| formamidopyrimidine-DNA glycosylase [Tistrella mobilis
KA081020-065]
gi|388530202|gb|AFK55399.1| formamidopyrimidine-DNA glycosylase [Tistrella mobilis
KA081020-065]
Length = 287
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 28/295 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE R I IG+++ V++ D + + + F + G+A+++A R+
Sbjct: 1 MPELPEVETVLRGIAPRMIGRRLAEVEARRPDLRRPLP----AGFVQRLTGRAVIAADRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKG----VAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
K L L L+ GM+G + I+ VA AV D + ++ L
Sbjct: 57 AKYLRLHLEGGETLIVHLGMSGRLVIEDAPPPVAFHHGPSIAVAD-----APHTHVVFRL 111
Query: 115 DDGLELSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIK 172
DDG + F D RRF + + +D + + LGP+ L + + ++ +K
Sbjct: 112 DDGTRILFADPRRFGLMDIAATDDLDAHDLFAHLGPEPLGNGFSGPYLARAFEGRRAPVK 171
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
ALLLDQ + G+GN A E L++A IHP + A +LS E C L ++ +++A+ G
Sbjct: 172 ALLLDQRVVVGVGNIYASESLFEAGIHPARAAGTLSAEDCDRLAAAVRATLDRAITAGGS 231
Query: 233 SSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ + F ++ + R P G I+ + R T + Q
Sbjct: 232 TLRDFVGASGELGYFQHSFRVYDRADAPCSREGCGGTIERVVQSNRATYFCSRCQ 286
>gi|377578559|ref|ZP_09807536.1| formamidopyrimidine-DNA glycosylase [Escherichia hermannii NBRC
105704]
gi|377540145|dbj|GAB52701.1| formamidopyrimidine-DNA glycosylase [Escherichia hermannii NBRC
105704]
Length = 269
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 129/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +I+ + SD ++ K ++S R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAIVRNGRLRW---PVSDEIHALSDKPVISVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ + E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRVL--------------PHEMPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF ++ LGP+ L + + ++KK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTASLEGHNVLAHLGPEPLSDEFNGEYLHQRCARKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A E L+ A IHP + A SLSKE C L IK V+ +++E G + +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDKLAQSLSKEECELLATAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE +P + V G I G R T + QK
Sbjct: 223 SDGKPGYFAQQLQVYGREGEPCR--VCGTPIQAGKHGQRRTYWCRRCQK 269
>gi|419421600|ref|ZP_13961828.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes PRP-38]
gi|422395436|ref|ZP_16475476.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL097PA1]
gi|327334307|gb|EGE76021.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL097PA1]
gi|379978091|gb|EIA11416.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes PRP-38]
Length = 280
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V+ +A+ G S
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTS 224
>gi|429098673|ref|ZP_19160779.1| Formamidopyrimidine-DNA glycosylase [Cronobacter dublinensis 582]
gi|426285013|emb|CCJ86892.1| Formamidopyrimidine-DNA glycosylase [Cronobacter dublinensis 582]
Length = 269
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 129/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRL---RWPVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L E KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSEAFNGAYLHQKCVKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A E L+ A IHP + A SLS+ C L + IK V+ +++E G + +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSENECELLAQAIKAVLLRSIEQGGTTLRDFLQ 222
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE +P + V G I R T + QK
Sbjct: 223 SDGKPGYFAQQLLVYGREGEPCR--VCGAPIQAGKHAQRRTYWCRRCQK 269
>gi|421231743|ref|ZP_15688388.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2080076]
gi|395596233|gb|EJG56455.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2080076]
Length = 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGST 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLSQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|51244765|ref|YP_064649.1| formamidopyrimidine-DNA glycosylase [Desulfotalea psychrophila
LSv54]
gi|81692916|sp|Q6APT2.3|FPG_DESPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|50875802|emb|CAG35642.1| probable formamidopyrimidine-DNA glycosylase [Desulfotalea
psychrophila LSv54]
Length = 277
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 37/296 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I G+ IV ++ ++ + + GK I R+GK
Sbjct: 1 MPELPEVEIILRGISPLICGRTIV-AVGGSGKQLRLPLPLPELNRDASGKEITRLERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ + L+ GMTG + V ++ +K+ F+ LD+ E
Sbjct: 60 YISIFLNDGGILVLHLGMTGQL-------------GVFPKEQARAKHDHFWCRLDNNQEF 106
Query: 121 SFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+ D RRF +R L S +LGP+ L E T D + K + IK ++
Sbjct: 107 RYNDTRRFGSIRFLPAGKSRMLQESLYQKLGPEPLGETFTADYLRRAAEGKSLAIKNFIM 166
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS--- 233
D + GIGN A+E L++A IHP ++ S+ +E L +CI++++ A++ G +
Sbjct: 167 DSHIVVGIGNIYANESLFKAAIHPARSVQSIEQEEWEKLARCIQQILLHAIDCGGSTISD 226
Query: 234 --------SQFPSNWIFHSREKKP---GKAFVDGKKIDFITAGGRTTAYVPELQKL 278
F N+ + ++ P + + +KI GGR + + P Q+L
Sbjct: 227 FVNAKGGQGYFQMNFKVYGKKSLPCPHCQGPISSEKI-----GGRASFFCPSCQRL 277
>gi|402298397|ref|ZP_10818092.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus alcalophilus ATCC 27647]
gi|401726370|gb|EJS99602.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus alcalophilus ATCC 27647]
Length = 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 135/298 (45%), Gaps = 45/298 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGK----------KIVKSIIADDNKVIDGVSASDFEASVLGK 50
MPELPEVE +R + E +GK KI+K DD K+ F+ + G+
Sbjct: 1 MPELPEVETVKRTLTELVVGKTIKEVEVLWPKIIKK--PDDAKI--------FQEMLQGQ 50
Query: 51 AILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
I +R+GK L +LD + + + ++G R + E +K++
Sbjct: 51 TIAGINRRGKFLIFQLDD-------YALVSHLRMEG-------RYGLHQKGEERTKHTHV 96
Query: 111 FVELDDGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK 168
+DG EL + D R+F + L + + P+ LG + E + + K +
Sbjct: 97 IFHFEDGTELWYQDVRKFGTMHLFLKGEEETATPLLGLGVEPFSEQFQQNILRLAFEKTQ 156
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+K +LLDQ + G+GN DE L+++ IHP + A S++ E L + I+E +++A++
Sbjct: 157 RKVKVVLLDQKAVVGLGNIYVDEALFRSGIHPERLASSITDEEIIILHQKIRETLQEAVD 216
Query: 229 VGADSSQFPSN-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
+G S + N +F R G+ V G +I GGR T + P QK
Sbjct: 217 MGGSSVKSYVNGQGDMGMFQQRLDVYGRKSLPCNVCGTEILKTVVGGRGTHFCPSCQK 274
>gi|395771773|ref|ZP_10452288.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces acidiscabies 84-104]
Length = 286
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 117/240 (48%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVADAEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + V+ D K+ + V D +
Sbjct: 61 KYLWLPLDDGGQAILAHLGMSGQLL-------------VQPPDAADEKHLRIRVRFADDV 107
Query: 119 E--LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
+ L F D+R F + L + P I + D L +P+ DE F ++L +K+ T+K
Sbjct: 108 QTQLRFVDQRTFGGLSLHDTTDDGLPDVIGHIARDPL-DPLFDDEAFHEALRRKRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L+++++H + ++ A LL +++V+ AL VG S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRSRLHYDRPVTGFTRPRTAELLGHVRDVMNAALAVGGTS 226
>gi|422506916|ref|ZP_16583134.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL046PA2]
gi|313819676|gb|EFS57390.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL046PA2]
Length = 256
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI--DGVS-ASDFEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + G++ A+ FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPRGGLAGAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V+ +A+ G S
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTS 224
>gi|339007841|ref|ZP_08640415.1| formamidopyrimidine-DNA glycosylase [Brevibacillus laterosporus LMG
15441]
gi|338775044|gb|EGP34573.1| formamidopyrimidine-DNA glycosylase [Brevibacillus laterosporus LMG
15441]
Length = 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 126/288 (43%), Gaps = 25/288 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + KKI + + + F++ ++G+ I + R+ K
Sbjct: 1 MPELPEVETVVRTLRTLVLNKKIERVSVLLPRIIRRPADVEQFKSILVGQTIHAVERRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LD S M G R V + E K++ DG EL
Sbjct: 61 FIKFILDQDVLIS-HLRMEG-------------RYGVYQSSEEIEKHTHVIFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + L V P+ +LGP+ L E T + L +K IK LLL+Q
Sbjct: 107 RYRDVRQFGTMDVIPLGKEQEVEPLKKLGPEPLDEAFTPTLLSSMLQRKTTKIKPLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++ G+GN DE L++A IHP + A +L+ + L I + +++A++ G S +
Sbjct: 167 EFMVGLGNIYVDEALFRANIHPERVANTLTNQQIEILHTSIVQTLQEAIDAGGSSIKSYV 226
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N +F K GK +I I GGR T + P QK
Sbjct: 227 NGQGEMGMFQQVLKVYGKKGELCPSCSTEIVKIVVGGRGTHFCPSCQK 274
>gi|184155792|ref|YP_001844132.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO
3956]
gi|227515614|ref|ZP_03945663.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum
ATCC 14931]
gi|385812535|ref|YP_005848926.1| DNA glycosylase [Lactobacillus fermentum CECT 5716]
gi|183227136|dbj|BAG27652.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO
3956]
gi|227086044|gb|EEI21356.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum
ATCC 14931]
gi|299783432|gb|ADJ41430.1| DNA glycosylase [Lactobacillus fermentum CECT 5716]
Length = 279
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 130/293 (44%), Gaps = 34/293 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + G++I K I + K I+ +F +++G+ I R+GK
Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQI-KGIDVNYGKTIEN-DVEEFRQALIGQTIERIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M + ++G Q + V K++ DG +L
Sbjct: 59 YLLFRFSN------DLTMVSHLRMEGSYFNQPTGAEV-------DKHTHVIFHFTDGTDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ E D F L K + IK LLDQ
Sbjct: 106 CYRDTRKFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL----------- 227
S+++G+GN ADEVL+Q +I+P Q A SL+ + L + I I +A
Sbjct: 166 SHVAGLGNIYADEVLWQTQINPEQPANSLTDDQIKRLRENIIAEIARATAGHGTTVHTFK 225
Query: 228 EVGADSSQFPSNW--IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
D+ QF + HS + P G K+ I R T + P Q L
Sbjct: 226 NAFGDAGQFQNELQAYGHSGDACPRC----GTKLVKIKVAQRGTTFCPHCQAL 274
>gi|423070300|ref|ZP_17059076.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius
F0413]
gi|355366621|gb|EHG14339.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius
F0413]
Length = 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 129/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLL--------------FEDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F LL + + ++GP+ + + F + L+K IK LLLD
Sbjct: 104 LVYQDVRKFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKFIKTLLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q ++G+GN DEVL+ AK+ P + A L K + +++ A+E G + +
Sbjct: 164 QHLVAGLGNIYVDEVLWAAKVDPERLARQLKKSEIKRIHDETIRILQLAIEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQKL 278
N + F K G++ G +I+ I GR T P QK+
Sbjct: 224 RNALGEDGTMQDFLQVYGKTGQSCTRCGHEIEKIKLAGRGTHLCPHCQKM 273
>gi|424787815|ref|ZP_18214579.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius BA1]
gi|422113569|gb|EKU17307.1| formamidopyrimidine-DNA glycosylase [Streptococcus intermedius BA1]
Length = 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 130/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ ++LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVCVPKMVKTGVE--DFQLNILGQTFESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F L+ G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLL--------------FEDEVPDNKHFHLFFGLNGGSI 103
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F LL + + ++GP+ + + F + L+K IK LLLD
Sbjct: 104 LVYQDVRKFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLTKSHKAIKTLLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q ++G+GN DEVL+ AK+ P + A L K + +++ A+E G + +
Sbjct: 164 QHLVAGLGNIYVDEVLWAAKVDPERLASQLKKSEIKRIHDETIRILQLAIEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQKL 278
N + F K G++ G +I+ I GR T P QK+
Sbjct: 224 RNALGEDGTMQDFLQVYGKTGQSCTRCGHEIEKIKLAGRGTHLCPHCQKM 273
>gi|386585719|ref|YP_006082121.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis D12]
gi|353737865|gb|AER18873.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis D12]
Length = 275
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 128/282 (45%), Gaps = 37/282 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + + + GV A F +++G+ IL R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVKGKVIERVKVTYAPMIKTGVDA--FCQNLIGQEILDVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT---DEWPS-KYSKFFVELDD 116
L IY+ + + R K D+ P+ K+ F D
Sbjct: 59 YLL------------------IYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFTD 100
Query: 117 GLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
G L + D R+F + LL D + ++GP+ E ++ F L+K K IK+
Sbjct: 101 GSTLVYQDVRKFGTMELLGKADVEAYFLSRKIGPEPTEEDFDLEAFAAKLAKSKKPIKSH 160
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQS ++G+GN DEVL++A++HP Q + LS E A L + EV++ +E G +
Sbjct: 161 LLDQSLVAGLGNIYVDEVLFKAQVHPAQASNQLSAEQVADLRQATIEVLQLGIEKGGSTI 220
Query: 235 QFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+ N + +DG D++ G+T P Q
Sbjct: 221 RTYKNAL-----------GMDGTMQDYLQVYGKTGQACPRCQ 251
>gi|365861189|ref|ZP_09400966.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. W007]
gi|364009340|gb|EHM30303.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. W007]
Length = 286
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRSVRRHLAGGVDFAARLRGVRFGVAMRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LW+ +D GM+G + ++ + DE K+ + + DD L
Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLLVQ----------PAEAPDE---KHLRIRMRFDDAL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ D F +L +++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPEGLPDTIAHIARDPL-DPLFDDAAFHTALRQRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++AK+H + +L++ A LL ++V+ AL G S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRAKLHYDRPTETLTRPKSAELLGHARDVMNAALAQGGTS 226
>gi|418977697|ref|ZP_13525511.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis SK575]
gi|383349665|gb|EID27594.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis SK575]
Length = 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSVEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + V F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLEAYFLSKKLGPEPSEQDFDVQVFQAALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTSAEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQECVRCGTIIEKIQLGGRGTHFCPQCQR 272
>gi|374855142|dbj|BAL58006.1| formamidopyrimidine-DNA glycosylase [uncultured Chloroflexi
bacterium]
Length = 265
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 28/285 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +++ +G+ + + ++F+ + G+ I + R+GK
Sbjct: 1 MPELPEVETIVRGLQQPLVGRTFTGVTVLWPASI--KTPLAEFKKRLPGQQIKAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L M+G + + + D P + + LD+G +
Sbjct: 59 YLQFHLSQGDTLLMHLKMSGDLLV--------------EPDHQPLHPHVRTIFTLDNGHQ 104
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F D R+F ++ L++DP V +LGP+ L + +++F +K +K+LLL+Q
Sbjct: 105 LRFKDMRKFGRIYLVSDPAEV--TGKLGPEPLADEFRLEDFKALFRGRKGRLKSLLLNQE 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV-GAD------ 232
+I+GIGN ADE + A I P + A +L++ L + I++ + + + GA
Sbjct: 163 FIAGIGNIYADESCFLAGIDPRRPAHTLTETELERLYQAIRQALSRGIMFKGATLDEVYR 222
Query: 233 SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
QF +++ + R +P F G I + GR+T + + QK
Sbjct: 223 GGQFQNHFQVYGRANEP--CFNCGSPIQRLVLNGRSTCFCSQCQK 265
>gi|259500514|ref|ZP_05743416.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335]
gi|302191204|ref|ZP_07267458.1| formamidopyrimidine-DNA glycosylase [Lactobacillus iners AB-1]
gi|309808040|ref|ZP_07701959.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
01V1-a]
gi|312875632|ref|ZP_07735633.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2053A-b]
gi|325912596|ref|ZP_08174979.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B]
gi|349611544|ref|ZP_08890779.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sp. 7_1_47FAA]
gi|259167898|gb|EEW52393.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335]
gi|308168723|gb|EFO70822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
01V1-a]
gi|311088886|gb|EFQ47329.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2053A-b]
gi|325478017|gb|EGC81146.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B]
gi|348608637|gb|EGY58617.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sp. 7_1_47FAA]
Length = 276
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADFFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEG-------------KYHFLDSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
S + G+GN DEVL+Q+KIHPL A ++++S L I I+ A++
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDSLVELFYDINNTIKIAIQ 215
>gi|343491707|ref|ZP_08730088.1| DNA-formamidopyrimidine glycosylase [Mycoplasma columbinum SF7]
gi|343128506|gb|EGV00306.1| DNA-formamidopyrimidine glycosylase [Mycoplasma columbinum SF7]
Length = 273
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEV ++ +GKKI K I D K+I VS +F+ +L + I + GK
Sbjct: 1 MPEMPEVITVVNDLKVKILGKKITKLDIYKD-KLIKEVSPLEFKKFLLNETIEDLYNIGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ +L + + MTG YK+ + ++ DD L
Sbjct: 60 HIIFKLSNEKYLLSHLRMTGK-------YNTYKKMRSLEAHDY------LVFSFDDNSTL 106
Query: 121 SFTDKRRFA--KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +R + + P+++L P + + VD+ + +K I IK L+LDQ
Sbjct: 107 YYNDARQFGTFHIRTKENLMTSNPLAKLAPTP--DLINVDDLYQKIRRKSIPIKNLILDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
S++ GIGN A+E L+ KIHP L+ E L+K E+++++++ G S Q
Sbjct: 165 SFVLGIGNIYANEALWATKIHPTTKTNKLTLEQLRNLIKAADEIMQESIKQGGSSIQSYS 224
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + H ++ KP I+ I G R T Y P QK
Sbjct: 225 SVDGVRGNFQNFLKVHMKDNKPCPRC--QTLIEKIYVGQRGTYYCPHCQK 272
>gi|300714652|ref|YP_003739455.1| formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661]
gi|299060488|emb|CAX57595.1| Formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661]
Length = 269
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 38/292 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNK----VIDGVSASDFEASVLGKAILSAH 56
MPELPEVE +RR IE H +G I+ +I+ +D ++ S SD + +LS
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRNDRLRWPVSLEIQSLSD-------QPVLSVQ 53
Query: 57 RKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
R+ K L + L + GM+G++ V + P+K+ + + +
Sbjct: 54 RRAKYLLIELPHG-WIIIHLGMSGSL-------------RVLPEELPPAKHDHVDLVMSN 99
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
G L +TD RRF D + ++ LGP+ L + + + D K+ +K L+
Sbjct: 100 GKVLRYTDPRRFGAWLWCTDLAASNVLAHLGPEPLHDAFSAEYLFDKSRNKRTPVKPWLM 159
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
D + G+GN A E L+ A IHP + A++L+++ A L+K IK V+ +++E G + +
Sbjct: 160 DNKLVVGVGNIYASESLFVAGIHPDRPAMTLTQDEAALLVKTIKAVLLRSIEQGGTTLRD 219
Query: 236 ----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R +P + V I R+T Y P QK
Sbjct: 220 FLQTDGKPGYFAQELQVYGRAGEPCR--VCATPIKSAKHAQRSTFYCPTCQK 269
>gi|283787732|ref|YP_003367597.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168]
gi|282951186|emb|CBG90879.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168]
Length = 269
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 131/289 (45%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G KI+ + + + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGAKILHAHV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGDYLLQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A E L+ A IHP + A SLS+ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSQADCELLVRVIKAVLLRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y QK
Sbjct: 223 SDGKPGYFAQELQVYGRKGEPCR--VCGTPIIATKHAQRATFYCRRCQK 269
>gi|309805278|ref|ZP_07699330.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
09V1-c]
gi|312871811|ref|ZP_07731899.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
3008A-a]
gi|329920100|ref|ZP_08276931.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN
1401G]
gi|308165512|gb|EFO67743.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
09V1-c]
gi|311092753|gb|EFQ51109.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
3008A-a]
gi|328936554|gb|EGG32998.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN
1401G]
Length = 276
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADFFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEG-------------KYHFLDSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
S + G+GN DEVL+Q+KIHPL A ++++S L I I+ A++
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDSLVELFYDINNTIKIAIQ 215
>gi|429112214|ref|ZP_19173984.1| Formamidopyrimidine-DNA glycosylase [Cronobacter malonaticus 507]
gi|426313371|emb|CCK00097.1| Formamidopyrimidine-DNA glycosylase [Cronobacter malonaticus 507]
Length = 269
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 116/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS++ C L++ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLVQAIKAVLLRSIEQGGTT 216
>gi|168494399|ref|ZP_02718542.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
CDC3059-06]
gi|418073754|ref|ZP_12711012.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA11184]
gi|418078463|ref|ZP_12715686.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
4027-06]
gi|418080427|ref|ZP_12717639.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
6735-05]
gi|418089366|ref|ZP_12726523.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA43265]
gi|418098343|ref|ZP_12735442.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
6901-05]
gi|418114469|ref|ZP_12751459.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
5787-06]
gi|418116709|ref|ZP_12753680.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
6963-05]
gi|418135031|ref|ZP_12771888.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA11426]
gi|418173342|ref|ZP_12809956.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41277]
gi|418216421|ref|ZP_12843145.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
Netherlands15B-37]
gi|419431369|ref|ZP_13971514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
EU-NP05]
gi|419433570|ref|ZP_13973688.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA40183]
gi|419440189|ref|ZP_13980241.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA40410]
gi|419464192|ref|ZP_14004085.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA04175]
gi|419468838|ref|ZP_14008709.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA06083]
gi|419493106|ref|ZP_14032833.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47210]
gi|419495287|ref|ZP_14035005.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47461]
gi|419497154|ref|ZP_14036864.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47522]
gi|419534437|ref|ZP_14073940.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA17457]
gi|421211074|ref|ZP_15668058.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070035]
gi|421242918|ref|ZP_15699439.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2081074]
gi|421280958|ref|ZP_15731756.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA04672]
gi|421289601|ref|ZP_15740352.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA54354]
gi|421303188|ref|ZP_15753852.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA17484]
gi|421304920|ref|ZP_15755576.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA62331]
gi|421309408|ref|ZP_15760035.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA62681]
gi|183575665|gb|EDT96193.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
CDC3059-06]
gi|353747654|gb|EHD28310.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
4027-06]
gi|353750601|gb|EHD31239.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA11184]
gi|353752967|gb|EHD33591.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
6735-05]
gi|353762052|gb|EHD42615.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA43265]
gi|353769703|gb|EHD50219.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
6901-05]
gi|353787211|gb|EHD67618.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
5787-06]
gi|353789686|gb|EHD70078.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
6963-05]
gi|353840041|gb|EHE20115.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41277]
gi|353873472|gb|EHE53333.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
Netherlands15B-37]
gi|353902268|gb|EHE77798.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA11426]
gi|379539411|gb|EHZ04590.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA04175]
gi|379546941|gb|EHZ12079.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA06083]
gi|379565171|gb|EHZ30164.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA17457]
gi|379576571|gb|EHZ41495.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA40183]
gi|379579956|gb|EHZ44852.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA40410]
gi|379595144|gb|EHZ59953.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47210]
gi|379595369|gb|EHZ60177.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47461]
gi|379601147|gb|EHZ65923.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47522]
gi|379630735|gb|EHZ95316.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
EU-NP05]
gi|395573797|gb|EJG34384.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070035]
gi|395609617|gb|EJG69703.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2081074]
gi|395882119|gb|EJG93166.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA04672]
gi|395888842|gb|EJG99852.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA54354]
gi|395901810|gb|EJH12746.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA17484]
gi|395905582|gb|EJH16487.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA62331]
gi|395910829|gb|EJH21698.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA62681]
Length = 274
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLSQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|83595128|ref|YP_428880.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum rubrum ATCC
11170]
gi|386351895|ref|YP_006050143.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodospirillum rubrum F11]
gi|123525348|sp|Q2RMQ2.1|FPG_RHORT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|83578042|gb|ABC24593.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Rhodospirillum rubrum ATCC 11170]
gi|346720331|gb|AEO50346.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Rhodospirillum rubrum F11]
Length = 281
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 17/236 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + +G+++ S +A + D + GK + S R+ K
Sbjct: 1 MPELPEVETVRLGLTPALVGERL--SRVAARRPALRLPIPVDLVQRLTGKVVGSLDRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR+ P GM+G++ + +A P + E + GL +
Sbjct: 59 YLLLRMIDGPVALIHLGMSGSMTVGPLA-----------GHAEPGPHDHILFETEAGLRV 107
Query: 121 SFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+F D RRF + L +P ++ P +++LGP+ L E + L+ ++ IKA LLD
Sbjct: 108 TFRDPRRFGLITL-AEPETLDDHPLLAKLGPEPLSEAFDAEVLVRRLNGRQAPIKAALLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
Q ++G+GN E L++A I PL+ A S++ L+ I+ V+ +A+ G S
Sbjct: 167 QGVVAGLGNIYVSEALFRAGISPLRPAASVTGAWAEALVAAIRAVLGEAIAAGGSS 222
>gi|148992895|ref|ZP_01822514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP9-BS68]
gi|168490211|ref|ZP_02714410.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP195]
gi|417678924|ref|ZP_12328321.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA17570]
gi|418125596|ref|ZP_12762506.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44511]
gi|418191517|ref|ZP_12828021.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47388]
gi|418214144|ref|ZP_12840879.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA54644]
gi|418234168|ref|ZP_12860747.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA08780]
gi|419484164|ref|ZP_14023940.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA43257]
gi|419508041|ref|ZP_14047694.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA49542]
gi|421220120|ref|ZP_15676970.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070425]
gi|421222447|ref|ZP_15679238.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070531]
gi|421278746|ref|ZP_15729554.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA17301]
gi|421293995|ref|ZP_15744718.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA56113]
gi|421300838|ref|ZP_15751508.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA19998]
gi|147928347|gb|EDK79363.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP9-BS68]
gi|183571439|gb|EDT91967.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP195]
gi|332073303|gb|EGI83782.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA17570]
gi|353797562|gb|EHD77895.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44511]
gi|353857418|gb|EHE37381.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47388]
gi|353871427|gb|EHE51298.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA54644]
gi|353888413|gb|EHE68187.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA08780]
gi|379583675|gb|EHZ48552.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA43257]
gi|379611759|gb|EHZ76481.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA49542]
gi|395588397|gb|EJG48727.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070425]
gi|395588615|gb|EJG48943.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070531]
gi|395880179|gb|EJG91232.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA17301]
gi|395894285|gb|EJH05265.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA56113]
gi|395898398|gb|EJH09342.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA19998]
Length = 274
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLNQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|373252028|ref|ZP_09540146.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Nesterenkonia sp. F]
Length = 323
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 59/277 (21%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G++ + + D + DG F + G+ +A R+
Sbjct: 1 MPELPEVEVVRRGVERWAVGRRADRPDVHDARSLRRHDG-GVEHFADRLTGRTFGAARRR 59
Query: 59 GKNLWLRL----------DSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS 105
GK LW+ L D F GM+G + V+ D P
Sbjct: 60 GKYLWIPLHAAGSSAATADGSEFGEALVIHLGMSGQVL-------------VQPDDAPPE 106
Query: 106 KYSKFFVELDD--------------------GLELSFTDKRRFAKVRL-----LNDPTSV 140
K+ K V+L D G +L F D+R F +++ + P+
Sbjct: 107 KHLKVSVDLRDAPEAASEGAPADDVGPAARTGRQLRFVDQRIFGGLQIRSLVPADHPSGT 166
Query: 141 PP--ISELGPDALLEPM--TVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQA 196
P I+ +GPD L EP V+ F +L +++ +K LLDQ+ SGIGN ADE L++A
Sbjct: 167 VPESIAHIGPDPL-EPAGAAVEPFFRALRRRRSGLKRALLDQTLRSGIGNIYADEALWRA 225
Query: 197 KIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
++H + ++++ A LL ++EV+E AL+ G S
Sbjct: 226 RLHFARRTETVTRAEAARLLGAVREVMEAALDAGGTS 262
>gi|421567636|ref|ZP_16013370.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM3001]
gi|402343669|gb|EJU78815.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM3001]
Length = 275
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLIVRFQTGIL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D + L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYERLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPRC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|428306815|ref|YP_007143640.1| DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA
glycosylase [Crinalium epipsammum PCC 9333]
gi|428248350|gb|AFZ14130.1| DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA
glycosylase [Crinalium epipsammum PCC 9333]
Length = 283
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 42/301 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + + KKI+ + + +SA DF A + G AI HR+GK
Sbjct: 1 MPELPEVETVRQGLNHVTLAKKILGGDVLLTRTIAHPLSAEDFLAGLKGTAITEWHRRGK 60
Query: 61 NLWLRL------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L + S + MTG + D ++ K+++ +
Sbjct: 61 YLLASVIDAHSASSAGWLGVHLRMTGQLLWV-------------DQEQPLEKHTRVRLFF 107
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPP------ISELGPDALLEPMTVDEFTDSLSKKK 168
G EL F D+R F ++ + T PP + +LG D + +V+ T L ++K
Sbjct: 108 QGGHELRFVDQRTFGQMWWVQPGT--PPEEVITGLQKLGLDPFSDDFSVEYLTKQLHQRK 165
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+IK +LLDQ+ ++G+GN ADE L+ + I P A SL+ E L I +V+E ++
Sbjct: 166 RSIKTVLLDQATVAGLGNIYADEALFLSGIKPTTVASSLTVEQIERLRTAIIQVLENSIA 225
Query: 229 VGADS-SQFPS-----------NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
G + S F + W++ +R +P + V I + GR+ + PE Q
Sbjct: 226 AGGTTFSNFLNVQGVNGNYGGIAWVY-NRTSQPCR--VCNTPILRLKLVGRSAHFCPECQ 282
Query: 277 K 277
Sbjct: 283 H 283
>gi|336066253|ref|YP_004561111.1| formamidopyrimidine-DNA glycosylase [Erysipelothrix rhusiopathiae
str. Fujisawa]
gi|334296199|dbj|BAK32070.1| formamidopyrimidine-DNA glycosylase [Erysipelothrix rhusiopathiae
str. Fujisawa]
Length = 273
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ K+I SI K+++ S E S++G + HR+GK
Sbjct: 1 MPELPEVETIIRTLEKSLKDKQI-DSIDFIYPKLLEDQSEYPLE-SLVGSNFQAFHRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LW + + M G ++ D D+ PSK++ + D G +
Sbjct: 59 YLWFEMSNGLHWILHLRMEGKFHLY-------------DYDKAPSKHTHCVINYDGG-TI 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+ D R+F+++ ++ +P LG + + + + +K +LLDQS
Sbjct: 105 HYLDTRKFSRMAIVKEPLKYLETKNLGLEPFDTNLNGEYIYQKIHHSNRVMKTILLDQSI 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD-------- 232
I+GIGN ADE+L++ +IHPL T ++ + C +L++ K ++ A++ G
Sbjct: 165 IAGIGNIYADEILFETQIHPLTTGSKITMKQCDSLVETTKIILRNAIKAGGTTVRSYTSS 224
Query: 233 ---SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
S +F N + R P K I GR+T + + QK+
Sbjct: 225 LNVSGRFQINLNAYGRAGDPCSRCSSIMK--RIVVSGRSTVFCEKCQKV 271
>gi|325000485|ref|ZP_08121597.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudonocardia sp. P1]
Length = 280
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 25/245 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + +H + +++ + V + S DF A + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLADHVLDRRVAAVEVLHPRAVRRHPTGSADFTARLTGRTLRAAARRG 60
Query: 60 KNLWLRLDSPPFPS----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
K LWL LD+ GM+G + V+D E K+ + + D
Sbjct: 61 KYLWLELDTAEAGDDALLAHLGMSGQML-------------VEDPAEPDEKHLRVRLRFD 107
Query: 116 D-GLELSFTDKRRFAKVRLLN-DPTS----VP-PISELGPDALLEPMTVDEFTDSLSKKK 168
D G EL F D+R F + + P S +P P++ + D + + D+ +L +++
Sbjct: 108 DDGPELRFVDQRTFGGLSVHPLAPASGGGLLPEPVAHIARDPMDPAFSADDTVAALRRRR 167
Query: 169 ITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+K LLDQ+ +SGIGN ADE L++A++H L+ L++ +L V+ AL
Sbjct: 168 TEVKRALLDQTVVSGIGNIYADEALWRARLHGLRPTEKLTRAQGHAVLDAATTVMTAALA 227
Query: 229 VGADS 233
G S
Sbjct: 228 QGGTS 232
>gi|90023321|ref|YP_529148.1| formamidopyrimidine-DNA glycosylase [Saccharophagus degradans 2-40]
gi|123395478|sp|Q21EE3.1|FPG_SACD2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|89952921|gb|ABD82936.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Saccharophagus degradans 2-40]
Length = 271
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 17/234 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I H GK++ ++ N+ + +D + K + + HR+GK
Sbjct: 1 MPELPEVETTRRGILPHLEGKRV--KAVSVRNRSLRWPIPADLAQQIQNKTLRTIHRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + + GM+G++ I DE P + + L L
Sbjct: 59 YLLLEFANGHV-IWHLGMSGSLRII-------------KADEPPMVHDHVDIAFGGNLAL 104
Query: 121 SFTDKRRFAKVRLLNDPT-SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+TD RRF V N+ ++ LGP+ L + D K+ ++K ++D
Sbjct: 105 RYTDPRRFGAVLWTNEAILEHKLLNHLGPEPLTDAFNSAYLFDKSRKRSQSVKTWIMDSK 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A+E L+ + IHPL+ A LS++ C IK V+ KA+E G +
Sbjct: 165 VVVGVGNIYANEALFNSAIHPLKAAGKLSQKQCDIFCSEIKSVLAKAIEQGGTT 218
>gi|325978855|ref|YP_004288571.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|386338290|ref|YP_006034459.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|325178783|emb|CBZ48827.1| fpg [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334280926|dbj|BAK28500.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 273
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 130/293 (44%), Gaps = 37/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G+KIV A D +V I FE +LG+ + R+
Sbjct: 1 MPELPEVETVRRGLESLIVGRKIV----AVDVRVPKIVKTDLVSFETEILGQTFQNIGRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSA--VKDTDEWP-SKYSKFFVELD 115
GK L L L+ K V ++ + + ++ P +K+ +LD
Sbjct: 57 GKYLLLMLN-----------------KQVIISHLRMEGKYLLFPEQVPDNKHFHVLFQLD 99
Query: 116 DGLELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DG L + D R+F + LL N + +LGP+ E + EFT L K IK
Sbjct: 100 DGSTLVYQDIRKFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKP 159
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ + G+GN DE L+ AKIHP + ++SL+ A L I +++ + G +
Sbjct: 160 YLLDQTLVVGLGNIYVDEALWAAKIHPERVSLSLTDSEIALLHDEIIRILQLGIAKGGTT 219
Query: 234 SQFPSNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+ N F K G+ I+ I GGR T P QK
Sbjct: 220 IRTYHNAFGEDGNMQQFLQVYGKTGEPCPRCATPIEKIKVGGRGTHLCPACQK 272
>gi|376296907|ref|YP_005168137.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans
ND132]
gi|323459469|gb|EGB15334.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans
ND132]
Length = 272
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R ++ G+ I + ++ + VLG+ I R+ K
Sbjct: 1 MPELPEVEVIARGLDASVTGRTIESVEVPGLTRLSE--PEETLVPKVLGRTITHVRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ +F MTG + V KR+A ++ + LDDG L
Sbjct: 59 VLLVELDNGSTLAFHLKMTGRV------VHGPKRAA--------QRHDRILFHLDDGSML 104
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTV--DEFTDSLSKKKITIKALLL 176
F D R+F VR ++ + + GP EP+ + + ++ + IKALLL
Sbjct: 105 YFADMRKFGYVRCFAADELDCWDFLCKAGP----EPLETAPEALAERVTGRNCAIKALLL 160
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL--------- 227
+QS ++G+GN ADE L++A I+P + ++ L ++ V+ +A+
Sbjct: 161 NQSVVAGVGNIYADESLFRAGINPETRGSRVGRDRAVRLFTALQAVLRQAIAENGSSISD 220
Query: 228 --EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D+ F +++ + R+ +P +A G+ + +T GRT+ + P Q+
Sbjct: 221 YVNAHGDAGAFQNSFNVYGRKGEPCRAC--GETLRAVTVAGRTSTFCPRCQR 270
>gi|325912043|ref|ZP_08174441.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII
143-D]
gi|325475993|gb|EGC79161.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII
143-D]
Length = 276
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADLFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEG-------------KYHFLDSDTPKQKHEHVQFAFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
S + G+GN DEVL+Q+KIHPL A ++++S L I I+ A++
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDSLVELFYDINNTIKIAIQ 215
>gi|312874220|ref|ZP_07734254.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2052A-d]
gi|311090290|gb|EFQ48700.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2052A-d]
Length = 276
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADLFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEG-------------KYHFLDSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
S + G+GN DEVL+Q+KIHPL A ++++S L I I+ A++
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDSLVELFYDINNTIKIAIQ 215
>gi|309803096|ref|ZP_07697193.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
11V1-d]
gi|309810236|ref|ZP_07704081.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN
2503V10-D]
gi|308164604|gb|EFO66854.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV
11V1-d]
gi|308169508|gb|EFO71556.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN
2503V10-D]
Length = 276
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL+ R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADLFQRKVVGQKILAIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEG-------------KYHFLDSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
S + G+GN DEVL+Q+KIHPL A ++++S L I I+ A++
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDSLVELFYDINNTIKIAIQ 215
>gi|254485969|ref|ZP_05099174.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. GAI101]
gi|214042838|gb|EEB83476.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. GAI101]
Length = 283
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 133/291 (45%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G+ I + AD N+ + D A + G+ + R+
Sbjct: 1 MPELPEVETVRRGLSPVMEGQVIAR---ADVNRPDLRWPFPPDMAARLTGQKVERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + L S GM+G + I G + Q+ V D P K+ + + +G
Sbjct: 58 KYILADLSSGESLLIHLGMSGRMLISGDPLGQF----VHDHPS-PEKHDHVVLHMANGAR 112
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + LL+ + + ++ +GP+ L L + IK+ LLD
Sbjct: 113 VTFNDPRRFGAMDLLDTQNADAHKLLASIGPEPLGNDFNEAHLVAVLKGRNTPIKSALLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q ++G+GN E LY+A IHP + A ++ A L+ I++V+E+A+ G + +
Sbjct: 173 QRIVAGLGNIYVCETLYRAGIHPARKAGKIAATRVAGLVPIIRQVLEEAITAGGSTLRDF 232
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE P +A +I I GR++ Y + Q+
Sbjct: 233 KQADGELGYFQHSFDVYGREGDPCRAEECTGQIARIVQSGRSSFYCAQCQR 283
>gi|15900847|ref|NP_345451.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
TIGR4]
gi|111657968|ref|ZP_01408675.1| hypothetical protein SpneT_02000857 [Streptococcus pneumoniae
TIGR4]
gi|149010384|ref|ZP_01831755.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP19-BS75]
gi|182683916|ref|YP_001835663.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
CGSP14]
gi|303254437|ref|ZP_07340543.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
BS455]
gi|303259882|ref|ZP_07345857.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP-BS293]
gi|303262296|ref|ZP_07348240.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP14-BS292]
gi|303264718|ref|ZP_07350636.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
BS397]
gi|303267325|ref|ZP_07353185.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
BS457]
gi|303269130|ref|ZP_07354909.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
BS458]
gi|387759224|ref|YP_006066202.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
INV200]
gi|418139319|ref|ZP_12776149.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13338]
gi|418180427|ref|ZP_12816998.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41688]
gi|418200299|ref|ZP_12836744.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47976]
gi|419514524|ref|ZP_14054151.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
England14-9]
gi|421247231|ref|ZP_15703718.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2082170]
gi|421268174|ref|ZP_15719045.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SPAR95]
gi|421296036|ref|ZP_15746748.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA58581]
gi|21362546|sp|Q97R61.3|FPG_STRPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|14972445|gb|AAK75091.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
TIGR4]
gi|147764865|gb|EDK71794.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP19-BS75]
gi|182629250|gb|ACB90198.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
CGSP14]
gi|301801813|emb|CBW34524.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
INV200]
gi|302598604|gb|EFL65644.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
BS455]
gi|302636619|gb|EFL67110.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP14-BS292]
gi|302639087|gb|EFL69547.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP-BS293]
gi|302641317|gb|EFL71685.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
BS458]
gi|302643135|gb|EFL73422.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
BS457]
gi|302645805|gb|EFL76034.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
BS397]
gi|353846039|gb|EHE26077.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41688]
gi|353865346|gb|EHE45255.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47976]
gi|353905562|gb|EHE80985.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13338]
gi|379637620|gb|EIA02173.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
England14-9]
gi|395614867|gb|EJG74885.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2082170]
gi|395871090|gb|EJG82201.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SPAR95]
gi|395897249|gb|EJH08213.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA58581]
Length = 274
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D V IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDVYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|260599932|ref|YP_003212503.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter turicensis z3032]
gi|429102416|ref|ZP_19164390.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis 564]
gi|260219109|emb|CBA34464.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis z3032]
gi|426289065|emb|CCJ90503.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis 564]
Length = 269
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRL---RWPVSDEIHALSDKPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + D +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLRDKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS++ C L + IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTT 216
>gi|345023450|ref|ZP_08787063.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Ornithinibacillus scapharcae TW25]
Length = 275
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ ++ + + I + N + F+ ++G+ I RKGK
Sbjct: 1 MPELPEVETIRKTLKRFVLNRTINDVNVYWGNIIKKPDDTEHFKQLLIGQTIHDIKRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + + + ++G YK VK K++ EL
Sbjct: 61 FLLFELDD-------YTLISHLRMEGKYSVHYKDEPVK-------KHTHVIFSFTTDEEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + ++N + P+ +LGPD + T+D F L +IKA+LLDQ
Sbjct: 107 RYNDVRKFGTMHIVNKGEELIQKPLDQLGPDPFDKEFTLDYFYKRLKTTNRSIKAVLLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ ++G+GN DE L++A+IHPL+ + L+K+ + K +E+A+E G +
Sbjct: 167 TVVAGLGNIYVDETLFKARIHPLKKSNKLTKKEVQEIRKQAILTLEEAVEQGGTT 221
>gi|16330976|ref|NP_441704.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803]
gi|383322718|ref|YP_005383571.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325887|ref|YP_005386740.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491771|ref|YP_005409447.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437038|ref|YP_005651762.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803]
gi|451815134|ref|YP_007451586.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803]
gi|2494596|sp|P74290.3|FPG_SYNY3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|1653470|dbj|BAA18384.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803]
gi|339274070|dbj|BAK50557.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803]
gi|359272037|dbj|BAL29556.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275207|dbj|BAL32725.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278377|dbj|BAL35894.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451781103|gb|AGF52072.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803]
Length = 287
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 129/297 (43%), Gaps = 36/297 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + + I + D + VS DF+ + G ++ R+GK
Sbjct: 1 MPELPEVETVCRGLNRLTLEQTIGGGEVLLDRSLAYPVSVEDFQKQITGCRLVGWQRRGK 60
Query: 61 NLW--LRLDSPPFPSFQFG----MTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L LR + P P+ G MTG + + D+ ++++ +
Sbjct: 61 YLLGELRSNQAPGPAGWLGCHLRMTGQLLWT-------------ERDQQRPRHTRVVLHF 107
Query: 115 DDGLELSFTDKRRFAKVRLL--NDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKIT 170
+ G EL F D R F KV LL + P + + + +LGP+ T + + L +
Sbjct: 108 EGGWELRFVDTRTFGKVWLLPGDRPWAEVMTGLGQLGPEPFGADFTAEYLYEKLKSSRRP 167
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+K LLDQ ++G+GN ADEVL+ HP + +S + C + + I+ + A+E G
Sbjct: 168 LKNALLDQRLVAGLGNIYADEVLFFCGFHPTMASNQVSLQDCELIHQQIQATLTAAIEAG 227
Query: 231 ADS-----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
S + + RE +P + G I I GGR+ + P+ Q
Sbjct: 228 GTSFSDYRQVTGINGNYGGMAQVYGREGEPCRHC--GTVIAKIKLGGRSAHFCPQCQ 282
>gi|288905821|ref|YP_003431043.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus
UCN34]
gi|288732547|emb|CBI14119.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus
gallolyticus UCN34]
Length = 273
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 130/294 (44%), Gaps = 39/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV--IDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR +E +G+KIV A D +V I FE +LG+ + R+
Sbjct: 1 MPELPEVETVRRGLESLIVGRKIV----AVDVRVPKIVKTDLVSFETEILGQTFQNIGRR 56
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSA--VKDTDEWP-SKYSKFFVELD 115
GK L L L+ K V ++ + + ++ P +K+ +LD
Sbjct: 57 GKYLLLMLN-----------------KQVIISHLRMEGKYLLFPEQVPDNKHFHVLFQLD 99
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPPISE---LGPDALLEPMTVDEFTDSLSKKKITIK 172
DG L + D R+F + LL P + + LGP+ E + EFT L K IK
Sbjct: 100 DGSTLVYQDIRKFGTMELLY-PNQIEAYFQKKNLGPEPTKETFDLSEFTRKLKASKKIIK 158
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LLDQ+ + G+GN DE L+ AKIHP + ++SL+ A L I +++ + G
Sbjct: 159 PYLLDQTLVVGLGNIYVDEALWAAKIHPERVSLSLTDSEIALLHDEIIRILQLGIAKGGT 218
Query: 233 SSQFPSNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+ + N F K G+ I+ I GGR T P QK
Sbjct: 219 TIRTYHNAFGEDGNMQQFLQVYGKTGEPCPRCATPIEKIKVGGRGTHLCPACQK 272
>gi|420263393|ref|ZP_14766031.1| DNA-formamidopyrimidine glycosylase [Enterococcus sp. C1]
gi|394769681|gb|EJF49526.1| DNA-formamidopyrimidine glycosylase [Enterococcus sp. C1]
Length = 280
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 32/293 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ + K I +S+ ++I+ F + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVLNKTI-ESVEILWPRIIESPEVPIFSTLLKGQRFEKFERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G + ++D K++ DG +L
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG-------KYEYFESDPIVDKHTHVIFHFTDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F ++ L++ S I +LGP+ E ++ F L + K IK LLLDQ
Sbjct: 106 NYHDVRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
++G+GN DE L+QAKIHP Q A SL L + I +V+E+A+E G
Sbjct: 166 KLVTGLGNIYVDEALWQAKIHPEQPADSLMPTEVDVLHEAIIDVLERAVEAGGTTIRTYL 225
Query: 231 ---ADSSQFPSNWIFHSREKKP-GKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
++ +F + + + P G+ G I I R T + P+ QKL+
Sbjct: 226 NALGEAGKFQMSLNVYGQTGNPCGRC---GTPIVKIKVAQRGTHFCPQCQKLH 275
>gi|350567555|ref|ZP_08935965.1| DNA-formamidopyrimidine glycosylase [Propionibacterium avidum ATCC
25577]
gi|348662626|gb|EGY79283.1| DNA-formamidopyrimidine glycosylase [Propionibacterium avidum ATCC
25577]
Length = 280
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVS--ASDFEASVLGKAILSAHR 57
MPELPEVE R +E I + + + D + G S A FE + G+ + +R
Sbjct: 1 MPELPEVETVRAGLEILVIPSVVERVDVVDVRGLRTTGGSEEARTFETILTGRQFTAINR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G Q++ V D + ++++ + L D
Sbjct: 61 RGKYLWFVLDDGTAMLAHLGMSG----------QFR---VVDREAPRHRHTRVVIGLGDD 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L VP P++ + PD + VDE L ++ TIK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDDVPGPVAHIAPDPFEDSFGVDEVARRLRARRSTIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +EV+ +A+ G S
Sbjct: 168 DQTLVSGIGNIYADETLWRVRRHPETPCSRLSQRKAVELLETAREVMSEAITQGGTS 224
>gi|443328347|ref|ZP_21056946.1| formamidopyrimidine-DNA glycosylase Fpg [Xenococcus sp. PCC 7305]
gi|442792059|gb|ELS01547.1| formamidopyrimidine-DNA glycosylase Fpg [Xenococcus sp. PCC 7305]
Length = 282
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 39/299 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +++ + I S + V +S ++F+ S+LG AI S R+GK
Sbjct: 1 MPELPEVETVRRGLDKLTTNQFIEGSAVLLPRTVAYPLSVAEFDNSILGAAIASWQRRGK 60
Query: 61 NLWLRL-DSPPFPSFQFG----MTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVEL 114
L L D P+ G MTG +++K E K+++ +
Sbjct: 61 YLIAELIDKSKKPAGYLGVHLRMTGQLLWLK--------------QSEPLQKHTRVRLFF 106
Query: 115 DDGLELSFTDKRRFAKVRLLNDPTSVPP-----ISELGPDALLEPMTVDEFTDSLSKKKI 169
EL F D R F K L+ P S P + +LGP+ T LSK++
Sbjct: 107 PGNQELRFVDTRTFGKFWLV-PPASSPETIITGLQKLGPEPFATEFTSAYLAAKLSKRRR 165
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
IK LLLDQ+ ++GIGN ADE L++++I P A L+ L I EV+E A+
Sbjct: 166 NIKTLLLDQNIVAGIGNIYADETLFKSQIRPETLATDLTVAQIDKLHAAIIEVLEIAIAQ 225
Query: 230 GADS-----------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
G + + ++ + + R+ +P + V I+ I GGR++ + P+ Q+
Sbjct: 226 GGTTFSDFLNLLGVNGNYGNSALVYGRQGEPCR--VCNTPIEKIKLGGRSSHFCPKCQE 282
>gi|421075530|ref|ZP_15536543.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans JBW45]
gi|392526528|gb|EIW49641.1| Formamidopyrimidine-DNA glycosylase [Pelosinus fermentans JBW45]
Length = 274
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKS--IIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPE+PEVE RR++ + G+ IV+ ++A +++ S+++F+A + + I + R+
Sbjct: 1 MPEMPEVEIIRRSLIDKISGRTIVEVEFLLA---RLVKWPSSAEFQAVLTNRKIETVARR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQY-KRSAVKDTDEWPSKYSKFFVELDDG 117
GK L LD MTG + QY R KD K+++ +LD+G
Sbjct: 58 GKYLLFHLDDKQVLVIHLRMTGRL--------QYITRDGEKD------KFTRIIFKLDNG 103
Query: 118 LELSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L + D R + L+ ++ + + +GP+ L ++ T+ L K IKA+L
Sbjct: 104 DLLVYADTRTLGTLYLMPFDELWRIAGLFTMGPEPLTPEFSLVYLTEMLKKHHGKIKAIL 163
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG----- 230
L+Q YI G+GN DE + A IHP + A SLS+ L I +VI +E G
Sbjct: 164 LNQKYIGGLGNIYVDECMAIAGIHPERIASSLSENENEKLYHAINKVIADGIEHGGTTFR 223
Query: 231 --------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ S Q+ N + R+ +P G I GR T + P+ QK
Sbjct: 224 DYRDGDGKSGSHQYHLN--VYGRKDEP--CLSCGTPIHRKEVAGRGTHFCPKCQK 274
>gi|408828138|ref|ZP_11213028.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces somaliensis DSM 40738]
Length = 289
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 115/240 (47%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + V + DF + + G + A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAAVEVLHPRAVRRHLGGGIDFASRLTGHRVGVARRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + ++ + V+ + DD L
Sbjct: 61 KYLWLPLDDTNASVLGHLGMSGQLLVQPETAPDERHLRVR-------------IRFDDAL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPEGLPDAIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L+++++H + L++ LL I++V++ AL G S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRSRLHYDRPTALLTRPRSYELLGHIRDVMDAALAAGGTS 226
>gi|404493500|ref|YP_006717606.1| formamidopyrimidine-DNA glycosylase [Pelobacter carbinolicus DSM
2380]
gi|90101308|sp|Q3A3F2.3|FPG_PELCD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|77545543|gb|ABA89105.1| formamidopyrimidine-DNA glycosylase [Pelobacter carbinolicus DSM
2380]
Length = 271
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I I +K+V ++ + S+ A ++G A R+ K
Sbjct: 1 MPELPEVETIRRGISPWVIDQKVVAVVVRQPR--LRWPVPSNLSACLVGYAFSGVERRAK 58
Query: 61 NLWLRLDSPPFPS----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
L L P P+ GM+G++ I +D P+ + + L+
Sbjct: 59 YLLL-----PNPAGCLLIHLGMSGSLRIV-------------PSDTPPAAHDHVDIALES 100
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSL-----SKKKIT 170
G L D RRF V + P ++ LGP EP V EFT ++ +K+
Sbjct: 101 GRTLRLNDPRRFGAVLWIEGRPEDHALLAHLGP----EPFAV-EFTGAMLYARSRGRKLA 155
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
+K ++DQ + G+GN A E LY+A IHP++ A +S+ A L + +++V+ A+E G
Sbjct: 156 VKNFIMDQRIVVGVGNIYASEALYRAGIHPMRAAGRVSRRRYAALAEAVRQVLTAAIEAG 215
Query: 231 ADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ + F + + RE +P G+ I T G R++ + Q+
Sbjct: 216 GTTLRDFTDENGRPGYFSQRLLVYGREGQP--CVHCGRPIRCETIGQRSSYFCTRCQR 271
>gi|42519527|ref|NP_965457.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC
533]
gi|81703799|sp|Q74IB5.3|FPG_LACJO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|41583816|gb|AAS09423.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC
533]
Length = 276
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K II +++ + +F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKIIIWYPKIIVN--NPDEFVEKLTNKKILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R S M + ++G + + D K+ DG L
Sbjct: 59 YLLFRF------SDDLTMVSHLRMEG-------KYHLVTPDHPKGKHEHVEFVFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ E +V+ F ++LS+KK IK LLDQ
Sbjct: 106 RYADVRKFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
+ + G+GN DEVL+Q+KIHPL +A S+ + L I I A
Sbjct: 166 TVVCGLGNIYVDEVLWQSKIHPLSSAKSIPADKIVDLYHNINHTITVA 213
>gi|375087315|ref|ZP_09733695.1| formamidopyrimidine-DNA glycosylase [Megamonas funiformis YIT
11815]
gi|374561405|gb|EHR32745.1| formamidopyrimidine-DNA glycosylase [Megamonas funiformis YIT
11815]
Length = 279
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 128/291 (43%), Gaps = 27/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK-SIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPE+PEVE I++ KKIV II D +I S+ +++ + + I S R+G
Sbjct: 1 MPEMPEVENIVVGIKDFIENKKIVDVEIIKGD--IIKSPSSDEYKKLLQDRIIKSLKRRG 58
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + LD MTG + K +E KYS L+D +
Sbjct: 59 KYIIMSLDDGRLNIIHLRMTGKL-------------LYKQENEDIDKYSCVIYHLEDKTK 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D RR + L+ ++ + + + LG + L T++ D L K K IK LL+
Sbjct: 106 LIYADIRRLGTLDLITTDEISRLKGLYTLGAEPLSSEFTIEYLKDCLDKSKTKIKPFLLN 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q ++G+GN DE L +KIHP + A SLS E L + I VI + + G S +
Sbjct: 166 QKNVAGLGNIYVDEALAISKIHPERKANSLSDEEIEKLHQAINLVISEGIRDGGTSFRDY 225
Query: 238 SNWI---------FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
N + + +K K I I GR T + P QKLN
Sbjct: 226 RNGLGEKGSHQDKLYVYNRKGKKCRFCHNLITKIVLNGRGTYFCPNCQKLN 276
>gi|315656592|ref|ZP_07909479.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492547|gb|EFU82151.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 321
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 50/323 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--SDFEASVLGKAILSAHRK 58
MPELPEVE RR +E+ +G +++ + + + A ++G + +A R+
Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60
Query: 59 GKNLWLRL--DSP----PFP-SFQFGMTGAIYIKGVAVTQYKRSAV----------KDTD 101
GK LW L D+P P GM+G + ++ T +++ A ++T
Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQGAPQHSRETR 120
Query: 102 EWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEF 160
P + +F LD+ +L F D+R F V L PT+ +G L P V+
Sbjct: 121 LLPHERLRF--TLDNEKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGVEHI 178
Query: 161 -----------TDSLSKKKITIKAL---LLDQSYISGIGNWVADEVLYQAKIHPLQTAVS 206
TD + K + +A+ LLDQS +SGIGN ADE L+ A+IHP S
Sbjct: 179 ARDVLDPCRDTTDFVKKTHASTRAIKTKLLDQSIVSGIGNIYADEGLFAARIHPAAPGRS 238
Query: 207 LSKESCATLLKCIKEVIEKALEVGADS------------SQFPSNWIFHSREKKPGKAFV 254
LS LL + V+E+AL G S +F + R +
Sbjct: 239 LSDRKLRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGRGGQ--SCHR 296
Query: 255 DGKKIDFITAGGRTTAYVPELQK 277
G ++D + GR++ + P Q+
Sbjct: 297 CGTRLDKMIIDGRSSVFCPRCQR 319
>gi|227530467|ref|ZP_03960516.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Lactobacillus vaginalis ATCC 49540]
gi|227349572|gb|EEJ39863.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
glycosylase [Lactobacillus vaginalis ATCC 49540]
Length = 280
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + G+KI I K I F S++G+ I + R+GK
Sbjct: 1 MPELPEVETVRRGLLKIAAGRKI-NGIDVHYGKTITN-DVEQFRQSLIGQTIETVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R + M G+ Y + V D K++ + DG EL
Sbjct: 59 YLLFRFSNHLTMVSHLRMEGSYYTQPV-------------DAPIDKHTHVVFKFTDGTEL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ D +V + +GP+ +D F L + + IK LL+Q
Sbjct: 106 CYRDTRKFGRMTLVKTGDEMTVGGLKTIGPEPTAADFKIDYFKRILQRSRGKIKPFLLNQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+I+G+GN DEVL+ +KI+P Q A +L+ + TL I + + +A+E
Sbjct: 166 RHIAGLGNIYVDEVLWMSKINPEQPANTLTDKQIQTLHDNIIQELSRAIE 215
>gi|320108584|ref|YP_004184174.1| formamidopyrimidine-DNA glycosylase [Terriglobus saanensis SP1PR4]
gi|319927105|gb|ADV84180.1| formamidopyrimidine-DNA glycosylase [Terriglobus saanensis SP1PR4]
Length = 270
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 130/292 (44%), Gaps = 39/292 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + E G++I + + + A+ E ++ G I HR GK
Sbjct: 1 MPELPEVETVANGVHERVHGRRIQHVTLGTKPEPLKS-PAALIEETLTGARIERVHRVGK 59
Query: 61 NL---WLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ LR P + GMTG + + K E P ++ + LDD
Sbjct: 60 TIVFDLLRDKKPAQFTVHLGMTGRLLVS------------KGEVEVPP-HTHAILALDDE 106
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTV--DEFTDSLSKKKITIKALL 175
E+ F D RRF ++ ++ T+ + EP+T+ ++F +K IKA L
Sbjct: 107 REIRFVDPRRFGRLAVIAPQTTYAGTGQ-------EPLTIGLEDFIALFRSRKTPIKAAL 159
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
L+QS + G+GN ADE L++A I P + A L++ A L +K+V++ A+++G S
Sbjct: 160 LNQSLLHGVGNIYADESLFRAGIRPKRQAGRLTRAELARLHTALKDVLKHAIQLGGSSVS 219
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R +P V I IT GGR+T + P Q
Sbjct: 220 DYVDADGVRGFFQLEHKVYMRTGQP--CLVCETPIKKITVGGRSTHFCPVCQ 269
>gi|383782233|ref|YP_005466800.1| putative formamidopyrimidine-DNA glycosylase [Actinoplanes
missouriensis 431]
gi|381375466|dbj|BAL92284.1| putative formamidopyrimidine-DNA glycosylase [Actinoplanes
missouriensis 431]
Length = 281
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 16/236 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE R+ + + G+ I + + + + + F A + G+ IL R+G
Sbjct: 1 MPELPEVETVRQGLSKWVAGRTIAAAEVHHPRAIRRHLPGDAHFSAVLAGRTILDISRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LDS GM+G + ++ K V+ F D G +
Sbjct: 61 KYLWLPLDSGDAVIAHLGMSGQLLMQPAEAPDEKHLRVR------------FTFTDGGPQ 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKALLLD 177
L F D+R F + + +P IS + D + +P+ DE F L + IK LLD
Sbjct: 109 LRFVDQRTFGGLSVSEGGAELPGEISHIARDPM-DPLFDDEAFVARLRGRHTEIKRALLD 167
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
Q+ ISG+GN ADE L++AK+H + +++ + LL +++V+ +A+ G S
Sbjct: 168 QTLISGVGNIYADEALWRAKLHGARPTDQITRPAAKRLLAHVRDVLSEAIVAGGTS 223
>gi|416182812|ref|ZP_11612248.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M13399]
gi|325134462|gb|EGC57107.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M13399]
Length = 280
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 6 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 63
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 64 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 113
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 114 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNA 173
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 174 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 233
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 234 SDGKSGYFQQEYTVYGRHNQPCPRC--GGLVVKETLGQRGTFYCPNCQK 280
>gi|289428678|ref|ZP_06430361.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165]
gi|295130990|ref|YP_003581653.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137]
gi|354607789|ref|ZP_09025757.1| formamidopyrimidine-DNA glycosylase [Propionibacterium sp.
5_U_42AFAA]
gi|386024411|ref|YP_005942716.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266]
gi|417930237|ref|ZP_12573616.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK182]
gi|422385609|ref|ZP_16465741.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL096PA3]
gi|422387744|ref|ZP_16467855.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL096PA2]
gi|422393664|ref|ZP_16473714.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL099PA1]
gi|422425599|ref|ZP_16502533.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL043PA1]
gi|422430652|ref|ZP_16507532.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL072PA2]
gi|422449683|ref|ZP_16526407.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA3]
gi|422462689|ref|ZP_16539311.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL038PA1]
gi|422473636|ref|ZP_16550110.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL056PA1]
gi|422477337|ref|ZP_16553770.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL007PA1]
gi|422481391|ref|ZP_16557791.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA1]
gi|422485988|ref|ZP_16562345.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL043PA2]
gi|422487460|ref|ZP_16563792.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL013PA2]
gi|422491428|ref|ZP_16567742.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL020PA1]
gi|422497110|ref|ZP_16573387.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA3]
gi|422503315|ref|ZP_16579556.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL027PA2]
gi|422505413|ref|ZP_16581643.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA2]
gi|422517359|ref|ZP_16593459.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL074PA1]
gi|422521168|ref|ZP_16597200.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL045PA1]
gi|422525754|ref|ZP_16601755.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL083PA1]
gi|422528968|ref|ZP_16604943.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL053PA1]
gi|422533757|ref|ZP_16609688.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL072PA1]
gi|422536763|ref|ZP_16612666.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL078PA1]
gi|422551117|ref|ZP_16626912.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA3]
gi|422555476|ref|ZP_16631244.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA2]
gi|422560295|ref|ZP_16635985.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA1]
gi|422566756|ref|ZP_16642384.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA2]
gi|289158076|gb|EFD06296.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165]
gi|291377097|gb|ADE00952.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137]
gi|313773587|gb|EFS39553.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL074PA1]
gi|313811638|gb|EFS49352.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL083PA1]
gi|313822218|gb|EFS59932.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA1]
gi|313823549|gb|EFS61263.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA2]
gi|313831379|gb|EFS69093.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL007PA1]
gi|313834991|gb|EFS72705.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL056PA1]
gi|314924612|gb|EFS88443.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL036PA3]
gi|314962024|gb|EFT06125.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA2]
gi|314974254|gb|EFT18350.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL053PA1]
gi|314976741|gb|EFT20836.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL045PA1]
gi|314978881|gb|EFT22975.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL072PA2]
gi|314984442|gb|EFT28534.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA1]
gi|314986460|gb|EFT30552.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA2]
gi|314990819|gb|EFT34910.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL005PA3]
gi|315081315|gb|EFT53291.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL078PA1]
gi|315083516|gb|EFT55492.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL027PA2]
gi|315087197|gb|EFT59173.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL002PA3]
gi|315089370|gb|EFT61346.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL072PA1]
gi|315095394|gb|EFT67370.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL038PA1]
gi|327328344|gb|EGE70106.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL096PA2]
gi|327329790|gb|EGE71546.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL096PA3]
gi|327444128|gb|EGE90782.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL043PA2]
gi|327444992|gb|EGE91646.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL043PA1]
gi|327446475|gb|EGE93129.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL013PA2]
gi|328752231|gb|EGF65847.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes
HL020PA1]
gi|328760096|gb|EGF73675.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes
HL099PA1]
gi|332675869|gb|AEE72685.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266]
gi|340772364|gb|EGR94868.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK182]
gi|353556335|gb|EHC25706.1| formamidopyrimidine-DNA glycosylase [Propionibacterium sp.
5_U_42AFAA]
gi|456738576|gb|EMF63143.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes FZ1/2/0]
Length = 256
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V+ +A+ G S
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTS 224
>gi|227510536|ref|ZP_03940585.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190188|gb|EEI70255.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 280
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 140/298 (46%), Gaps = 40/298 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E G +I +++ K+I+ + DF ++ + I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVAGSQI-RTVDVLYPKMIN-LPPEDFTNALKNQIIEKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-----SKYSKFFVELD 115
L++R+++ G+ + + R K D P SK++ L
Sbjct: 59 YLFIRINN-----------------GLTIVSHLRMEGK-YDVEPEGTPLSKHTHIVFHLT 100
Query: 116 DGLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DG +L + D R+F ++ L++ +V + +GP+ +T+D K K +K
Sbjct: 101 DGRQLRYNDTRKFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKP 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE----- 228
LLDQS I+G+GN ADEVL+ +KI+P Q +LS L K I + I+KA++
Sbjct: 161 FLLDQSNIAGLGNIYADEVLWLSKINPKQPVNTLSVAELKLLRKSIIDEIKKAIDGHGTT 220
Query: 229 ------VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
++ F ++ + R+ +P G I+ I R T + P Q ++G
Sbjct: 221 VHSYSNAYGEAGNFQNHLNVYGRQGEP--CLRCGTPIEKIKLAQRGTHFCPNCQVIHG 276
>gi|225023717|ref|ZP_03712909.1| hypothetical protein EIKCOROL_00581 [Eikenella corrodens ATCC
23834]
gi|224943599|gb|EEG24808.1| hypothetical protein EIKCOROL_00581 [Eikenella corrodens ATCC
23834]
Length = 273
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 123/293 (41%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I+ + GK + + ++ + + D + I+ HR+ K
Sbjct: 1 MPELPEVETTRRGIQPYMQGKTVAEVVVRQPK--LRWPVSPDLAQQLASSHIVYIHRRAK 58
Query: 61 NLWLRLDSPPFPS----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
L FP GM+G++ R D+ P K+ + D
Sbjct: 59 YLLFE-----FPHGVMLLHLGMSGSL-----------RVYPNDSAPPPEKHDHIDIITVD 102
Query: 117 GLELSFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L D RRF V P+ LGP+ L E T ++LS++K IK L
Sbjct: 103 QTVLRLRDPRRFGSVLWFTGAAEQHPLLQHLGPEPLQEEFTSGYLKNALSRRKSAIKTAL 162
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
+D + G+GN A+E L+ A I P + A +S E C L+ I+ V+ A+EVG S +
Sbjct: 163 MDNKVVVGVGNIYANEALFAAGILPTRRADRVSAEECRRLVVEIRNVLHCAIEVGGSSLR 222
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE +P G I G R++ Y P+ Q+
Sbjct: 223 DFVHSDGQSGYFQQQYHVYGREGEPCHHC--GTPIARQIVGQRSSFYCPKCQR 273
>gi|256847514|ref|ZP_05552960.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis
101-4-CHN]
gi|256716178|gb|EEU31153.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis
101-4-CHN]
Length = 277
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 36/294 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + E G++I+ I + K I+ F +++G+ I R+GK
Sbjct: 1 MPEMPEVETVRRGLNEIADGQQII-GIDVNYGKTIEN-DVEGFREALVGQTIEHVDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L R + M + ++G S K P K++ +G +
Sbjct: 59 YLLFRFSN------HLTMISHLRMEG--------SYFKQKTGMPVDKHTHVIFHFKNGTD 104
Query: 120 LSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++RL+ + + + +GP+ + +D F L K + IK LL+
Sbjct: 105 LCYRDTRKFGRMRLVTTGEEMNYGGLRTIGPEPTEQDFKLDYFERILHKSRGKIKPFLLN 164
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-----VGAD 232
QS+++G+GN DEVL+ +KI+P Q A +L+ E TL + I + I A E V
Sbjct: 165 QSHVAGLGNIYCDEVLWMSKINPEQAANTLTHEQAKTLRENIIKEIATATEHKGTTVHTY 224
Query: 233 SSQFPSNWIF--------HSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ F F H EK P G K+ I R T Y P Q+L
Sbjct: 225 KNAFGDAGGFQDYLKAYDHGGEKCP----RCGTKMVKIKVAQRGTTYCPHCQEL 274
>gi|421311712|ref|ZP_15762319.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA58981]
gi|395912290|gb|EJH23153.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA58981]
Length = 274
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRCLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|452953034|gb|EME58457.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Amycolatopsis decaplanina DSM 44594]
Length = 286
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H G+ I + + + + A DF + G I +A R+G
Sbjct: 1 MPELPEVEVVRAGLEAHVSGRTITEVEVLHARAIRRHELGAEDFSGRLSGVKITAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + ++ K V+ F D+G E
Sbjct: 61 KYLWLELSDGQAMLAHLGMSGQMLVQPDDAPDEKHLRVR------------FRFADNGPE 108
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L D T++P I+ + D + +D+ +L ++ IK
Sbjct: 109 LRFVDQRTFGGLALAELTEVDGTALPGTIAHIARDPMDPRFDLDQAVRALRSRRTEIKRA 168
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L+++K+H + L+ T+L EV+ +AL G S
Sbjct: 169 LLDQTLVSGIGNIYADEALWRSKLHWARPTDRLTAAHGRTVLTAASEVMAEALVAGGTS 227
>gi|385341787|ref|YP_005895658.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
M01-240149]
gi|325201993|gb|ADY97447.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
M01-240149]
Length = 275
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGITPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLIVRFQTGIL-LIHLGMSGSLRIFTPSDERIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPYRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPQC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|311739749|ref|ZP_07713584.1| DNA-formamidopyrimidine glycosylase [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311305565|gb|EFQ81633.1| DNA-formamidopyrimidine glycosylase [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 271
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 134/297 (45%), Gaps = 47/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE+ RR +E H +G+ V+ + N+ D ++GK + + R+
Sbjct: 1 MPELPEVESVRRGLEPHVVGRTFESVQVLHPRANRGQD----EPLSGLLIGKEVAAVARR 56
Query: 59 GKNLWLRL---DSP-PFPSFQF---GMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
GK +WL DS P F GM+G + I TD S + +
Sbjct: 57 GKFMWLEFVGEDSMDPHRDVLFIHLGMSGQVRIG-------------TTD---SPHLRIS 100
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
+L G+ELSF D+R F L P + IS +G D L + L KK +
Sbjct: 101 AQLSGGVELSFVDQRTFGY--WLYAPWA--KISHIGIDPLEPDFDIVATARRLRAKKTAV 156
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG- 230
K LLDQ+ SGIGN ADE L+ A+I P + A +L ++ LL+ +EV+ AL+VG
Sbjct: 157 KTALLDQTLASGIGNIYADESLWAAQIPPRKRASTLRQKDAVALLEAAQEVMAAALKVGG 216
Query: 231 -----------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+S F + + R +P + G ++ GR+T + P Q
Sbjct: 217 TSFDSLYVNVNGESGYFSRSLAAYGRAGQPCQRC--GTPLERCVISGRSTHFCPHCQ 271
>gi|422643543|ref|ZP_16706682.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330957096|gb|EGH57356.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 270
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 29/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I H G+++ + I+ D + D + + G+ I+ R+ K
Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGR--LRWPIPEDLDVRLSGQRIVQVERRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++ + S GM+G + + + K V +EL+ GL L
Sbjct: 59 YLLIQAEVGTLIS-HLGMSGNLRLVEAGLPALKHEHVD-------------IELESGLAL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + +DP + + LGP+ L + + + K I +K ++D +
Sbjct: 105 RYTDPRRFGAMLWSHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ----- 235
+ G+GN A E L+ A I P + A ++S+ L IK ++ A+E G + +
Sbjct: 165 VVGVGNIYASEALFAAGIDPRREAKTISRARYLKLAIEIKRILAYAIERGGTTLRDFIGG 224
Query: 236 ------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R +P K V G + I G R + Y P+ Q+
Sbjct: 225 DGKPGYFQQELFVYGRGGQPCK--VCGTTLREIKLGQRASVYCPKCQR 270
>gi|418288468|ref|ZP_12900950.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM233]
gi|418290714|ref|ZP_12902836.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM220]
gi|372201122|gb|EHP15085.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM220]
gi|372201811|gb|EHP15691.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM233]
Length = 275
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+ +A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPYRPANRLKKKECALLVETVKAVLRRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPQC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|15677162|ref|NP_274315.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis MC58]
gi|385853074|ref|YP_005899588.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76]
gi|416196385|ref|ZP_11618155.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis CU385]
gi|421538245|ref|ZP_15984422.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 93003]
gi|427827960|ref|ZP_18994979.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76]
gi|433465241|ref|ZP_20422723.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM422]
gi|433488578|ref|ZP_20445740.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M13255]
gi|433490621|ref|ZP_20447747.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM418]
gi|433505121|ref|ZP_20462060.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 9506]
gi|433507304|ref|ZP_20464212.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 9757]
gi|433509252|ref|ZP_20466121.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 12888]
gi|433511510|ref|ZP_20468337.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 4119]
gi|9911065|sp|P55044.4|FPG_NEIMB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|7226536|gb|AAF41671.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis MC58]
gi|316984086|gb|EFV63064.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76]
gi|325140479|gb|EGC63000.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis CU385]
gi|325200078|gb|ADY95533.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76]
gi|389605595|emb|CCA44512.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
alpha522]
gi|402317064|gb|EJU52603.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 93003]
gi|432203185|gb|ELK59239.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM422]
gi|432223411|gb|ELK79192.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M13255]
gi|432227612|gb|ELK83321.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM418]
gi|432241246|gb|ELK96776.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 9506]
gi|432241669|gb|ELK97198.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 9757]
gi|432246640|gb|ELL02086.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 12888]
gi|432247558|gb|ELL02995.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 4119]
Length = 275
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPRC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|417937746|ref|ZP_12581046.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis SK970]
gi|343392010|gb|EGV04583.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis SK970]
Length = 274
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 135/288 (46%), Gaps = 27/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI SI K+I +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSIEVHYPKMIK-TDLEEFQKELPGQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L S M G + Y + V + K++ + DG L
Sbjct: 59 YLLFHLSDKILIS-HLRMEGKYF--------YYQDQVPE-----RKHAHVLIHFKDGGTL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPIS-ELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + LL + IS +LGP+ + + F +L + K IK+ LLDQ
Sbjct: 105 VYEDVRKFGTMELLAPELLEAYFISKQLGPEPTEQDFDLGRFKLALKRSKKPIKSHLLDQ 164
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ + G+GN DEVL++AK+HP + + SL+ + + V+ +A+E G + + +
Sbjct: 165 TLVVGLGNIYVDEVLWRAKVHPARISQSLTAKEARKVHDETINVLGQAVEKGGSTIRTYT 224
Query: 239 NWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
N FH K G+A G I+ I GGR T + P Q+
Sbjct: 225 NAFGEDGTMQEFHQVYDKTGQACSRCGSIIEKIQLGGRGTHFCPRCQR 272
>gi|72080906|ref|YP_287964.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 7448]
gi|71914030|gb|AAZ53941.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae 7448]
Length = 275
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 32/293 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKI K+++A D+ I ++ DF+ S++ I+ + K
Sbjct: 1 MPELPEVVTVVNALKTEVIGKKI-KNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + LD+ M G + YK + +W KY D L
Sbjct: 60 HILIFLDNRKVILSHLRMNGKYF-------TYK------SPQW-GKYDYISFVFSDNSVL 105
Query: 121 SFTDKRRFA--KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F +R + P+ +L P+ + VD+F + K +IKA+LLDQ
Sbjct: 106 NYNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFF--IKVDDFYQKIRKSTRSIKAILLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-SQFP 237
ISG+GN ADEV + KI P + A +S++ ++ K+++++++++G S S +
Sbjct: 164 KIISGLGNIYADEVCFATKIFPGKAAKLISRKEAELIIYFSKKILQESIKLGGSSISSYT 223
Query: 238 S---------NWI-FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
S N++ H+++ P KI GR T + P QKL+
Sbjct: 224 SLNAKEGKFQNFLKVHTKQNFPCSN--CQTKILKTVIAGRGTYFCPFCQKLDN 274
>gi|385334736|ref|YP_005888683.1| DNA glycosylase [Mycoplasma hyopneumoniae 168]
gi|348161144|gb|ADQ90780.2| DNA glycosylase [Mycoplasma hyopneumoniae 168]
Length = 275
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 32/293 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKI K+++A D+ I ++ DF+ S++ I+ + K
Sbjct: 1 MPELPEVITVVNALKTEVIGKKI-KNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + LD+ M G + YK + +W KY D L
Sbjct: 60 HILIFLDNRKVILSHLRMNGKYF-------TYK------SPQW-GKYDYISFVFSDNSVL 105
Query: 121 SFTDKRRFA--KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F +R + P+ +L P+ + VD+F + K +IKA+LLDQ
Sbjct: 106 NYNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFF--IKVDDFYQKIRKSSRSIKAILLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-SQFP 237
ISG+GN ADEV + KI P + A +S++ ++ K+++++++++G S S +
Sbjct: 164 KIISGLGNIYADEVCFATKIFPGKAAKLISRKEAELIIDFSKKILQESIKLGGSSISSYT 223
Query: 238 S---------NWI-FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
S N++ H+++ P KI GR T + P QKL+
Sbjct: 224 SLNAKEGKFQNFLKVHTKQNFPCSN--CQTKILKTVIAGRGTYFCPFCQKLDN 274
>gi|443632242|ref|ZP_21116422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443348357|gb|ELS62414.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 278
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLTGETIQSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + +E K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A +HP A LS ++ TL IK +++A++ G +
Sbjct: 169 KTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYI 228
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + + QK
Sbjct: 229 NSQGEIGMFQLQHFVYGKKDEPCKNC--GTMISKIVVGGRGTHFCAKCQK 276
>gi|379719559|ref|YP_005311690.1| protein Mutprotein M [Paenibacillus mucilaginosus 3016]
gi|378568231|gb|AFC28541.1| MutM [Paenibacillus mucilaginosus 3016]
Length = 306
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 16/235 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I + + + F+A + G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLNVLVAGKTIERVSVHLARIIQHPDDIETFKALLEGETIQEVERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + D +F + + ++G R V + D+ ++ DG EL
Sbjct: 61 FLRIHTD-------RFTLVSHLRMEG-------RYGVYEADDPLELHTHVVFHFTDGTEL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVP--PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + P+ +LG + L E T + F ++ +K IK LLL+Q
Sbjct: 107 RYKDVRQFGTMHIYERGRDLEEKPLKKLGLEPLDEAFTFEAFRSRIAGRKTKIKPLLLNQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
YI GIGN DE L+ A IHP + A +L+K L + I + + A+E G S
Sbjct: 167 EYIVGIGNIYVDESLFLAGIHPEREADTLTKAEMIRLHQAIIQTLTDAVEAGGSS 221
>gi|257865987|ref|ZP_05645640.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC30]
gi|257872320|ref|ZP_05651973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC10]
gi|257799921|gb|EEV28973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC30]
gi|257806484|gb|EEV35306.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus
EC10]
Length = 280
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 32/293 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ + K I +S+ ++I+ F A + G+ R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVLNKTI-ESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + ++G + ++D K++ DG +L
Sbjct: 60 FLIFKLTD-------YDLISHLRMEG-------KYEYFESDPIVDKHTHVIFHFTDGSQL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F ++ L++ S I +LGP+ E ++ F L + K IK LLLDQ
Sbjct: 106 NYHDVRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
++G+GN DE L+QA+IHP Q A SL+ L + I +V+E+A+E G
Sbjct: 166 KLVTGLGNIYVDEALWQAEIHPEQPADSLTPAEANVLHQAIIDVLERAVEAGGTTIRTYL 225
Query: 231 ---ADSSQFPSNWIFHSREKKP-GKAFVDGKKIDFITAGGRTTAYVPELQKLN 279
++ +F + + + P G+ G I R T + P+ QKL+
Sbjct: 226 NALGEAGKFQMSLNVYGQTGNPCGRC---GTPIVKTKVAQRGTHFCPQCQKLH 275
>gi|392531516|ref|ZP_10278653.1| formamidopyrimidine-DNA glycosylase [Carnobacterium maltaromaticum
ATCC 35586]
Length = 284
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 114/241 (47%), Gaps = 16/241 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + G I + D + S+ F +LG+ I R+GK
Sbjct: 1 MPELPEVETVRKGLTNLVEGATIQDVDVYWDRIITAPFSSEAFRNDLLGQTIHKIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +D + M + ++G + V+ T K++ L DG +L
Sbjct: 61 YLIFLMDD-------WAMISHLRMEG-------KYEVEKTGTPLKKHTHVVFHLTDGRDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T P I LGP+ + E ++ F+ +L K IK LLL+Q
Sbjct: 107 RYLDVRKFGRMTLVPIGTEHEAPGIKGLGPEPIPELFKLEPFSVALGSKLRAIKPLLLEQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ G+GN DE L++AKIHPL+ A SL+ L I V+ +A+E G + +
Sbjct: 167 KIVVGLGNIYVDEALFEAKIHPLRPANSLTSIEIKNLHHSIIGVLGRAVEAGGTTIRTYQ 226
Query: 239 N 239
N
Sbjct: 227 N 227
>gi|221231733|ref|YP_002510885.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae ATCC
700669]
gi|415698177|ref|ZP_11457088.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
459-5]
gi|415749372|ref|ZP_11477316.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SV35]
gi|415752056|ref|ZP_11479167.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SV36]
gi|418105032|ref|ZP_12742091.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44500]
gi|418123244|ref|ZP_12760178.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44378]
gi|418127830|ref|ZP_12764726.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
NP170]
gi|418137005|ref|ZP_12773847.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA11663]
gi|418178002|ref|ZP_12814586.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41565]
gi|419473035|ref|ZP_14012886.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13430]
gi|220674193|emb|CAR68721.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae ATCC
700669]
gi|353778102|gb|EHD58572.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44500]
gi|353797331|gb|EHD77666.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44378]
gi|353800291|gb|EHD80605.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
NP170]
gi|353844776|gb|EHE24819.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41565]
gi|353901632|gb|EHE77164.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA11663]
gi|379552542|gb|EHZ17631.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13430]
gi|381309752|gb|EIC50585.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SV36]
gi|381317182|gb|EIC57912.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
459-5]
gi|381317666|gb|EIC58391.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SV35]
Length = 274
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP +++ +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARSSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|417698384|ref|ZP_12347557.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41317]
gi|418148396|ref|ZP_12785161.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13856]
gi|419453386|ref|ZP_13993359.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
EU-NP03]
gi|419505904|ref|ZP_14045565.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA49194]
gi|332202825|gb|EGJ16894.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41317]
gi|353813071|gb|EHD93304.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13856]
gi|379607818|gb|EHZ72564.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA49194]
gi|379627095|gb|EHZ91711.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
EU-NP03]
Length = 274
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLSQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQGCVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|225021994|ref|ZP_03711186.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii
ATCC 33806]
gi|224945280|gb|EEG26489.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii
ATCC 33806]
Length = 308
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 36/260 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ I + + + +F + +LG++I+ R+G
Sbjct: 1 MPELPEVETIRRGLAEHVCGRTIADVAVHHPRAIRHVLGGEGEFRSEILGRSIIGLGRRG 60
Query: 60 KNLWLRLDSP--------------PFPS-------FQFGMTGAIYIKGVAVTQYKRSAVK 98
K LWL L P P P GM+G + IK +
Sbjct: 61 KFLWLNLADPAVAAASASSGPTSQPTPQAGDQVVVVHLGMSGQMLIK---------DSNA 111
Query: 99 DTDEWPSKYSKFFVELDDGLELSFTDKRRFAK---VRLLNDPTS-VPPISELGPDALLEP 154
++D+ K+ + V DD +L F D+R F +L++ VP ++ LL+P
Sbjct: 112 NSDDPKFKHCRIQVRFDDNTQLWFVDQRTFGYWLPTQLVDAGLGLVPETADHIARDLLDP 171
Query: 155 -MTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCA 213
+ + E + K + +K LLL+Q I+GIGN ADE+L+ A I+P Q A +L +
Sbjct: 172 ELKLSEVASMMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTLDPAALK 231
Query: 214 TLLKCIKEVIEKALEVGADS 233
LL + V+ A+ G S
Sbjct: 232 NLLMAGRTVMRAAVARGGTS 251
>gi|108798918|ref|YP_639115.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS]
gi|119868033|ref|YP_937985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. KMS]
gi|123369434|sp|Q1BAM5.1|FPG_MYCSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|166215637|sp|A1UED7.1|FPG_MYCSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|108769337|gb|ABG08059.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Mycobacterium sp. MCS]
gi|119694122|gb|ABL91195.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. KMS]
Length = 296
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 113/258 (43%), Gaps = 34/258 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H GK I + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60
Query: 60 KNLWLRLDSPPFP-----------SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
K LWL LD P GM+G + + + + R A
Sbjct: 61 KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLLGPIPKEDHLRIAAL---------- 110
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
DDG LSF D+R F L + D T VP P++ + D L D
Sbjct: 111 -----FDDGTALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKV 165
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
L K IK LLDQ+ +SGIGN ADE L++AK++ + A SL+K A +L +V+
Sbjct: 166 LRGKHSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTKPKLAEILDHAADVM 225
Query: 224 EKALEVGADSSQFPSNWI 241
AL G + F S ++
Sbjct: 226 RDAL--GQGGTSFDSLYV 241
>gi|407935864|ref|YP_006851506.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes C1]
gi|407904445|gb|AFU41275.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Propionibacterium acnes C1]
Length = 256
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 17/237 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD---FEASVLGKAILSAHR 57
M ELPEVE R +E+ + + + D + D FE ++ G+ + +R
Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+GK LW LD GM+G + Q++ +++ + LDDG
Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHAPQHR-------------HTRIVITLDDG 107
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+L F D+R F + L +P P++ + PD E VDE L ++ IK LL
Sbjct: 108 RDLRFLDQRTFGGLTLAPLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLL 167
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
DQ+ +SGIGN ADE L++ + HP LS+ LL+ +V+ +A+ G S
Sbjct: 168 DQTLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAVELLQTACDVMAEAMSQGGTS 224
>gi|385851107|ref|YP_005897622.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
M04-240196]
gi|325205930|gb|ADZ01383.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
M04-240196]
Length = 280
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 6 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 63
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 64 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 113
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 114 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNA 173
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 174 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 233
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 234 SDGKSGYFQQEYTVYGRHNQPCPRC--GGLVVKETLGQRGTFYCPNCQK 280
>gi|54020255|ref|YP_116103.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 232]
gi|53987428|gb|AAV27629.1| foramidopyrimidine DNA glycosylase [Mycoplasma hyopneumoniae 232]
Length = 275
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 32/293 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV A++ IGKKI K+++A D+ I ++ DF+ S++ I+ + K
Sbjct: 1 MPELPEVITVVNALKTEVIGKKI-KNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
++ + LD+ M G + YK + +W KY D L
Sbjct: 60 HILIFLDNRKVILSHLRMNGKYF-------TYK------SPQW-GKYDYISFVFSDNSVL 105
Query: 121 SFTDKRRFA--KVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
++ D R+F +R + P+ +L P+ + VD+F + K +IKA+LLDQ
Sbjct: 106 NYNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFF--IKVDDFYQKIRKSTRSIKAILLDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-SQFP 237
ISG+GN ADEV + KI P + A +S++ ++ K+++++++++G S S +
Sbjct: 164 KIISGLGNIYADEVCFATKIFPGKAAKLISRKEAELIIDFSKKILQESIKLGGSSISSYT 223
Query: 238 S---------NWI-FHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
S N++ H+++ P KI GR T + P QKL+
Sbjct: 224 SLNAKEGKFQNFLKVHTKQNFPCSN--CQTKILKTVIAGRGTYFCPFCQKLDN 274
>gi|9971915|gb|AAG10477.1|AF279106_39 predicted formamidopyrimidine-DNA glycosylase [uncultured marine
gamma proteobacterium EBAC31A08]
Length = 270
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 27/253 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN---KVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RAI++ G + ++ I + N KV+D FE SV + + S R
Sbjct: 1 MPELPEVETTLRAIKKF-KGSLLKEARIHNRNLRWKVVDS-----FETSVKDQVVESLER 54
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K + +L + GM+G++ I K+ + + K+ + D+
Sbjct: 55 RAKYIIFKLSNDKKIILHLGMSGSLRI------------AKNNENFFIKHDHIELIFDEE 102
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
+ + D RRF + L +D I LGP+ L + +F S K IK+ L++
Sbjct: 103 -RIIYNDPRRFGSMHLTSDIDKHKLIKNLGPEPLSKNFNAKDFFSGCSHSKTNIKSYLMN 161
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q + GIGN A E L+ AKIHPL+ A L ++C L+ K+++E+A+EVG + +
Sbjct: 162 QKNVVGIGNIYASESLFLAKIHPLKNANELDLDACKRLVAAGKKILEQAIEVGGTTLK-- 219
Query: 238 SNWIFHSREKKPG 250
F+S + PG
Sbjct: 220 ---DFYSADGSPG 229
>gi|58040922|ref|YP_192886.1| formamidopyrimidine-DNA glycosylase [Gluconobacter oxydans 621H]
gi|81351172|sp|Q5FN17.3|FPG_GLUOX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|58003336|gb|AAW62230.1| Formamidopyrimidine-DNA glycosylase [Gluconobacter oxydans 621H]
Length = 277
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 26/290 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + G +I S + + + +D + G +LS R+ K
Sbjct: 1 MPELPEVETVMRGFRDAFEGHRI--SHVTVNRPDLRWPFPADLREKLEGHHVLSFRRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +RL+ GM+G + I T+ P + +E D G
Sbjct: 59 YILVRLEGGWSMLLHLGMSGRLTI-----------GRAGTNATPPAHEHLVLETDSGARA 107
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
D RRF V L+ ++ S ++ LG + L + MT + ++ IK+ LLDQ
Sbjct: 108 GLVDPRRFGMVDLVRTSEEDSHRLLAHLGMEPLSDAMTGPALAELFRGRRSPIKSALLDQ 167
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
I+G+GN E L++ IHP + A +L+ E A L + I +++E+A+ G S +
Sbjct: 168 KLIAGLGNIYVCEALFRCGIHPERQACTLTGEETAALAEAIPQILEQAIASGGSSLRDYV 227
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE P I IT GR+T + P QK
Sbjct: 228 QADGTKGAFQDLHLVYGREGVPCPNCGAEHPIQRITQAGRSTFFCPTCQK 277
>gi|227889521|ref|ZP_04007326.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC
33200]
gi|227849999|gb|EEJ60085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC
33200]
Length = 276
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + GK I K II +++ +F + K IL R GK
Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTIAKIIIWYPKIIVN--DPDEFVKKLTNKKILKIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + + D+ K+ DG L
Sbjct: 59 YLLFR--------FNDGLTMVSHLR-----MEGKYHLVTPDQPKGKHEHVEFVFTDGTAL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T I LGP+ E +V+ F ++LS+KK IK LLDQ
Sbjct: 106 RYADVRKFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
+ + G+GN DEVL+Q+KIHPL +A S+ + L I I A
Sbjct: 166 TVVCGLGNIYVDEVLWQSKIHPLSSAKSIPADKIVDLYHNINHTITVA 213
>gi|450105324|ref|ZP_21859836.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SF14]
gi|450175191|ref|ZP_21885019.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SM1]
gi|449224925|gb|EMC24549.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SF14]
gi|449247264|gb|EMC45549.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans SM1]
Length = 273
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 128/292 (43%), Gaps = 35/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFESIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLL--------------FEDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F LL + + ++GP+ + + F + L+K IK LLLD
Sbjct: 104 LVYQDVRKFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE--------- 228
Q ++G+GN DEVL+ AK++P + A L K + +++ A+E
Sbjct: 164 QHLVAGLGNIYVDEVLWAAKVNPERLARQLKKSEIKRIHDETIRILQLAIEKGGSTIRSY 223
Query: 229 ---VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+G D S ++ ++ + I+ I GGR T + P QK
Sbjct: 224 KNSLGEDGSMQDCLQVYGKTDQPCARC---ATPIEKIKVGGRGTHFCPSCQK 272
>gi|432374394|ref|ZP_19617425.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE11]
gi|430893816|gb|ELC16140.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE11]
Length = 269
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 130/288 (45%), Gaps = 30/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + GM+G++ I +T+ + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHLGMSGSLRI----LTEERP---------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF D ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKDLEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------- 233
+ G+GN A E L+ A IHP + A SLS C L + IK V+ +++E G +
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQS 223
Query: 234 ----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 224 DGKPGYFAQELQVYGRKGEPCR--VCGTPIVATKHAQRATFYCRQCQK 269
>gi|421563497|ref|ZP_16009316.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM2795]
gi|421907032|ref|ZP_16336920.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
alpha704]
gi|393291996|emb|CCI72887.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
alpha704]
gi|402341193|gb|EJU76380.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NM2795]
Length = 275
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGITPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLIVRFQTGIL-LIHLGMSGSLRIFTPSDERIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPYRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPRC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|312872916|ref|ZP_07732976.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2062A-h1]
gi|311091438|gb|EFQ49822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF
2062A-h1]
Length = 276
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 109/230 (47%), Gaps = 17/230 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR +E GK I I D +++ A F+ V+G+ IL R GK
Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVN--DADFFQRKVVGQKILDIDRYGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +RL + M G + D+D K+ D L
Sbjct: 59 YLLIRLTNNLTIVSHLRMEG-------------KYHFLDSDAPKQKHEHVQFTFSDNTYL 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L+ T I LG + E T+D F + + +K IK +LLDQ
Sbjct: 106 RYDDVRKFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKKAIKNVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
S + G+GN DEVL+Q+KIHPL A ++++S L I I+ A++
Sbjct: 166 SIVCGLGNIYTDEVLWQSKIHPLSIANKIAQDSLVELFYDINNTIKIAIQ 215
>gi|405980875|ref|ZP_11039204.1| formamidopyrimidine-DNA glycosylase [Actinomyces neuii BVS029A5]
gi|404392894|gb|EJZ87951.1| formamidopyrimidine-DNA glycosylase [Actinomyces neuii BVS029A5]
Length = 300
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 128/306 (41%), Gaps = 44/306 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE R + EH I + I V E S+ G+AIL +G
Sbjct: 1 MPELPEVEVVRAGLAEHTSNFLIEDAAIRHPRTARHTVGGPQALERSLRGRAILGWAVRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LD GM+G + V+ +D PSK+ + + G
Sbjct: 61 KYLWALLDDDTALVVHLGMSGQML-------------VRPSDAPPSKHERATLT-SGGRS 106
Query: 120 LSFTDKRRFAKVR---LLNDPTSVPP------------ISELGPDALLEPMTVDEFTDSL 164
L F D+R F +R L+ D VP +S +G D L + + +
Sbjct: 107 LRFVDQRTFGYLRADQLVGDRAGVPAGRGDADGRLPACVSHVGRDVLDPHLDMASVCRQV 166
Query: 165 SKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIE 224
+KA+LLDQ+ +SG+GN ADE L+ A++HPL+ LSK + + V+E
Sbjct: 167 QSSARAVKAILLDQTVVSGVGNIYADEALWAAQVHPLRRGNELSKPKIEQIYGACRLVME 226
Query: 225 KAL------------EVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYV 272
+AL V +S F + + R +P + G + + GR++
Sbjct: 227 RALTQGGTSFDSLYVNVNGESGYFSRSLSAYGRVGRPCERC--GTPMRKVVVAGRSSTVC 284
Query: 273 PELQKL 278
+ QK+
Sbjct: 285 VKCQKV 290
>gi|297622481|ref|YP_003703915.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM
17093]
gi|297163661|gb|ADI13372.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM
17093]
Length = 267
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 129/286 (45%), Gaps = 48/286 (16%)
Query: 11 RRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGKNLWLRLDSPP 70
RR +E + G+ I+ + + D G + E +V G+ IL+ R+GK L L L
Sbjct: 2 RRELEPYVRGRVILAATLVDAP---PGPKYARLERAV-GQRILAVTRRGKFLILPLSGGD 57
Query: 71 FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLELSFTDKRRFAK 130
GMTG + + E K+ + +EL +G L F D RRF
Sbjct: 58 DLIIHLGMTGIL-----------------SPEPAPKHVRVRLELSEGGALYFRDARRFG- 99
Query: 131 VRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGN 186
R L P+ ++P +S +GP+ L T D +L + + IK LL Q +SG+GN
Sbjct: 100 -RFLVVPSGAYEALPTLSAMGPEPLSAAFTGDALYRALQRSRTPIKPFLLSQKPVSGVGN 158
Query: 187 WVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---------------EVGA 231
ADE L++A+IHPL A +S+ A L I+EV+ +L EVGA
Sbjct: 159 IYADEALWRARIHPLTPANEVSRAKAAQLAGAIREVLAASLRAKGTTLQDYRTVNGEVGA 218
Query: 232 DSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ Q + + R +KP G + +T GGR T + Q+
Sbjct: 219 YALQLQA----YGRAEKPCPRC--GSPLRKVTLGGRGTHFCARCQR 258
>gi|339505885|ref|YP_004693305.1| formamidopyrimidine-DNA glycosylase MutM [Roseobacter litoralis Och
149]
gi|338759878|gb|AEI96342.1| formamidopyrimidine-DNA glycosylase MutM [Roseobacter litoralis Och
149]
Length = 283
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G I + AD N+ + D A + GK + R+
Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIKQ---ADVNRPDLRWPFPVDMAARLTGKRVERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + LDS GM+G + + G + Q+ P K+ + +
Sbjct: 58 KYILMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHR-----HPAPEKHDHVVFHMANNAR 112
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ ++ ++ LGP+ L + K +K++LLD
Sbjct: 113 ITFNDPRRFGAMDLMETASADAHKLLAVLGPEPLGNDFHESHLIAAFKNKNSPVKSVLLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q +SG+GN E L++AKIHP + A +S A L+ ++EV+ +A+E G S +
Sbjct: 173 QRIVSGLGNIYVCEALFRAKIHPTRKAGKISGARVAGLVPIVREVLAEAIEAGGSSLRDF 232
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE P K +I I GR++ Y + Q+
Sbjct: 233 RQADGELGYFQHSFDAYGREGDPCKRSGCTGQIRRIVQSGRSSFYCTQCQR 283
>gi|168483039|ref|ZP_02707991.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
CDC1873-00]
gi|417696161|ref|ZP_12345340.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47368]
gi|418091714|ref|ZP_12728856.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44452]
gi|418109936|ref|ZP_12746961.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA49447]
gi|418169072|ref|ZP_12805716.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA19077]
gi|418175787|ref|ZP_12812384.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41437]
gi|418218715|ref|ZP_12845382.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
NP127]
gi|418221023|ref|ZP_12847677.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47751]
gi|418238546|ref|ZP_12865101.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422780|ref|ZP_13962996.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA43264]
gi|419459814|ref|ZP_13999747.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA02270]
gi|419462131|ref|ZP_14002041.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA02714]
gi|419489060|ref|ZP_14028810.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44386]
gi|419525718|ref|ZP_14065282.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA14373]
gi|421272624|ref|ZP_15723468.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SPAR55]
gi|172043411|gb|EDT51457.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
CDC1873-00]
gi|332201436|gb|EGJ15506.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47368]
gi|353763814|gb|EHD44364.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44452]
gi|353782848|gb|EHD63278.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA49447]
gi|353834914|gb|EHE15010.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA19077]
gi|353842355|gb|EHE22402.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41437]
gi|353875370|gb|EHE55222.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
NP127]
gi|353875946|gb|EHE55796.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA47751]
gi|353894296|gb|EHE74038.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379532840|gb|EHY98064.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA02270]
gi|379532977|gb|EHY98200.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA02714]
gi|379559192|gb|EHZ24222.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA14373]
gi|379587953|gb|EHZ52800.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44386]
gi|379588238|gb|EHZ53083.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA43264]
gi|395875733|gb|EJG86811.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SPAR55]
Length = 274
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRSLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ FF +DG
Sbjct: 59 YLLFCLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHFFFRFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQIFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|444919930|ref|ZP_21239774.1| Formamidopyrimidine-DNA glycosylase [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444508797|gb|ELV08965.1| Formamidopyrimidine-DNA glycosylase [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 272
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 58/301 (19%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVK--------------SIIADDNKVIDGVSASDFEAS 46
MPELPEVE +R + + + + I K +I+ +N+ I V+
Sbjct: 1 MPELPEVETTKRGVAPYLLNESITKIDIHHRSLRYPVEDAILLMENQTITDVTRR----- 55
Query: 47 VLGKAILSAHRKGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK 106
L H G L + L GM+G++ V DE K
Sbjct: 56 ---AKYLMIHTAGFYLIVHL----------GMSGSL-------------RVSLPDEPLKK 89
Query: 107 YSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSK 166
+ L +G EL + D RRF V+L + +++L P+ L + VD F + +
Sbjct: 90 HDHLVFHLSNGRELRYHDPRRFGFVQLFQGDVTPDYLTKLAPEPLSDEFNVDYFQSIIVR 149
Query: 167 KKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA 226
KK IKA L+DQ ++ G+GN A+E L+ + IHPL +L++ C TL+ I+ V+ ++
Sbjct: 150 KKQPIKAFLMDQRFVVGVGNIYANESLFMSGIHPLTRTQNLTQAQCTTLVSNIRAVLARS 209
Query: 227 LEVGADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPEL 275
++ G + + F + RE +P G I+ R+T + P
Sbjct: 210 IQDGGTTLRDFIQPDGTHGYFAQMLSVYGREGEP--CLTCGTLIEKCVVAQRSTFWCPNC 267
Query: 276 Q 276
Q
Sbjct: 268 Q 268
>gi|227513545|ref|ZP_03943594.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri
ATCC 11577]
gi|227083418|gb|EEI18730.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri
ATCC 11577]
Length = 280
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 40/298 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E G +I +++ K+I+ + DF ++ + I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVAGSQI-RTVDVLYPKMIN-LPPEDFTNALKNQIIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-----SKYSKFFVELD 115
L++R+++ G+ + + R K D P SK++ L
Sbjct: 59 YLFIRINN-----------------GLTIVSHLRMEGK-YDVEPEGTPLSKHTHIVFHLT 100
Query: 116 DGLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DG +L + D R+F ++ L++ +V + +GP+ +T+D K K +K
Sbjct: 101 DGRQLRYNDTRKFGRINLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKP 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE----- 228
LLDQS I+G+GN ADEVL+ +KI+P Q +LS L K I + I++A++
Sbjct: 161 FLLDQSNIAGLGNIYADEVLWLSKINPKQPVNTLSVVELKLLRKSIIDEIKRAIDGHGTT 220
Query: 229 ------VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
++ F ++ + R+ +P G I+ I R T + P Q ++G
Sbjct: 221 VHSYSNAYGEAGNFQNHLNVYGRQGEP--CLRCGTPIEKIKLAQRGTHFCPNCQVIHG 276
>gi|255325274|ref|ZP_05366380.1| DNA-formamidopyrimidine glycosylase [Corynebacterium
tuberculostearicum SK141]
gi|255297839|gb|EET77150.1| DNA-formamidopyrimidine glycosylase [Corynebacterium
tuberculostearicum SK141]
Length = 271
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 134/297 (45%), Gaps = 47/297 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE+ RR +E H +G+ V+ + N+ D ++GK + + R+
Sbjct: 1 MPELPEVESVRRGLEPHVVGRTFESVQVLHPRANRGQD----EPLSGLLIGKEVAAVARR 56
Query: 59 GKNLWLRL---DSP-PFPSFQF---GMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
GK +WL DS P F GM+G + I TD S + +
Sbjct: 57 GKFMWLEFVGEDSMDPHRDVLFIHLGMSGQVRIG-------------TTD---SPHLRIS 100
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
+L G+ELSF D+R F L P + IS +G D L + L KK +
Sbjct: 101 AQLSGGVELSFVDQRTFGY--WLYAPWA--KISHIGIDPLEPDFDIVATARRLRAKKTAV 156
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG- 230
K LLDQ+ SGIGN ADE L+ A+I P + A +L ++ LL+ +EV+ AL+VG
Sbjct: 157 KTALLDQTLASGIGNIYADESLWAAQIPPRKRASTLRQKDAVALLESAQEVMTAALKVGG 216
Query: 231 -----------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
+S F + + R +P + G ++ GR+T + P Q
Sbjct: 217 TSFDSLYVNVNGESGYFSRSLAAYGRAGQPCQRC--GTPLERCVISGRSTHFCPHCQ 271
>gi|428207132|ref|YP_007091485.1| DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA
glycosylase [Chroococcidiopsis thermalis PCC 7203]
gi|428009053|gb|AFY87616.1| DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA
glycosylase [Chroococcidiopsis thermalis PCC 7203]
Length = 309
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 52/319 (16%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + ++I + D + S +DF + GKAI HR+GK
Sbjct: 1 MPELPEVETVRRGANQVTLNREITGGDVLLDRTIAYPFSVADFLNGISGKAIAQWHRRGK 60
Query: 61 NLWLRL--------------------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDT 100
L L S P+ +F + + ++ GV + +
Sbjct: 61 YLLAELVKGSREQGAIPSCKSQVASRKSQLIPNSEFRIPNSEFL-GVHLRMTGQLLWLPQ 119
Query: 101 DEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP----------ISELGPDA 150
DE K+++ + L + EL F D+R F ++ VPP ++ LGPD
Sbjct: 120 DEPLHKHTRVRLFLAENWELRFVDQRTFGQMWW------VPPERVVESVVTGLATLGPDP 173
Query: 151 LLEPMTVDEFTDSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKE 210
+V+ F L ++ IK LLDQS ++GIGN ADE L++A + P L
Sbjct: 174 FSSDFSVEYFATKLRDRRRPIKNALLDQSIVAGIGNIYADEALFRAGVQPQTLCADLRSP 233
Query: 211 SCATLLKCIKEVIEKALEVGADS-SQFPS-----------NWIFHSREKKPGKAFVDGKK 258
+ L I EV+E ++ G + S F + W+++ R KP + +
Sbjct: 234 QISRLRTAILEVLEASINAGGTTFSNFLNVQGVNGNYGGVAWVYN-RAGKPCR--ICNTP 290
Query: 259 IDFITAGGRTTAYVPELQK 277
I + GR+ + P+ QK
Sbjct: 291 ILKLRLAGRSAHFCPQCQK 309
>gi|227833426|ref|YP_002835133.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum
ATCC 700975]
gi|262184416|ref|ZP_06043837.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum
ATCC 700975]
gi|254789433|sp|C3PH91.1|FPG_CORA7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|227454442|gb|ACP33195.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum
ATCC 700975]
Length = 282
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 129/296 (43%), Gaps = 43/296 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE+ RR +E + +G+ ++ + G A A ++G+ I + R+GK
Sbjct: 1 MPELPEVESVRRGLEPYVVGRSF-AAVEVHHPRANRGQEAP-LSALLVGRKIAAVARRGK 58
Query: 61 NLWLRL----DSPPFPSFQF---GMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
+WL S P F GM+G + I V + +AV
Sbjct: 59 FMWLEFADEDHSDPARDVLFIHLGMSGQVRIGEVDSPHVRIAAV---------------- 102
Query: 114 LDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LDD LSF D+R F RL ++ + PD L + L K+ +KA
Sbjct: 103 LDDTTRLSFVDQRTFGYWRL----GPWLSMAHIAPDPLETDFDLTAAGRRLRAKRTVVKA 158
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG--- 230
LLDQ+ +SG+GN ADE L+ +I PL+ A +L + ++ +V+ AL VG
Sbjct: 159 ALLDQTVLSGVGNIYADEALWAVQISPLKKASALRQRDAVAVISAAADVMRAALAVGGTS 218
Query: 231 ---------ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+S F + + R +P + G++I GGR T Y P Q
Sbjct: 219 FDALYVNVNGESGYFDRSLHVYGRGGQPCERC--GEEILKTVLGGRGTHYCPSCQN 272
>gi|418112325|ref|ZP_12749327.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41538]
gi|419466413|ref|ZP_14006296.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA05248]
gi|419512366|ref|ZP_14052000.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA05578]
gi|419516646|ref|ZP_14056264.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA02506]
gi|421283160|ref|ZP_15733947.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA04216]
gi|353784191|gb|EHD64612.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA41538]
gi|379544536|gb|EHZ09680.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA05248]
gi|379636836|gb|EIA01394.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA05578]
gi|379640649|gb|EIA05188.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA02506]
gi|395881123|gb|EJG92172.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA04216]
Length = 274
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 134/291 (46%), Gaps = 29/291 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI I + +F+ V + + S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEICYPKMI--KTDLDEFQKEVPDQIVESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L + S M G + D+ P K++ F + +DG
Sbjct: 59 YLLFCLTNKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFQFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +LSK K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPSEQDFDLQVFQSALSKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAAEVTAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGK-AFVDGKKIDFITAGGRTTAYVPELQKLN 279
+N FH K G+ G I+ I GGR T + P Q+ N
Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQECSCCGTIIEKIQLGGRGTHFCPHCQRRN 274
>gi|261856609|ref|YP_003263892.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus
c2]
gi|261837078|gb|ACX96845.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus
c2]
Length = 281
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 111/238 (46%), Gaps = 25/238 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDN---KVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE RR +E H +G++I + + D +V D D A + G+ I++ R
Sbjct: 1 MPELPEVETTRRGLEPHLLGQRITSATVFDSRLRWRVRD-----DLAAWLEGRLIIAVSR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K L L ++ GM+G++ I + + K V+ + ++
Sbjct: 56 RSKYLLLHFENGERLLIHLGMSGSLRIVTPDIPRRKHDHVE-------------ICINSS 102
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPPI--SELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
L F D RRF LL D P I LGP+ L + L K+K IK L
Sbjct: 103 KNLRFHDPRRFGA--LLTDHEQAPHIRLQNLGPEPLSDAFDTHYLGTQLHKRKQAIKPCL 160
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
++ + + G+GN A+EVL+ + IHP A +L L+ IK V+ +A+E G +
Sbjct: 161 MNAAIVVGVGNIYANEVLFLSGIHPATPAHTLDHNQINLLVTAIKNVLARAIEQGGTT 218
>gi|451337402|ref|ZP_21907947.1| Formamidopyrimidine-DNA glycosylase [Amycolatopsis azurea DSM
43854]
gi|449419997|gb|EMD25508.1| Formamidopyrimidine-DNA glycosylase [Amycolatopsis azurea DSM
43854]
Length = 286
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H G+ I + + + A DF + G I +A R+G
Sbjct: 1 MPELPEVEVVRAGLEAHVAGRTITDVEVLHARAIRRHELGAEDFSGRLSGTKITAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L GM+G + ++ K V+ F D+G E
Sbjct: 61 KYLWLELSDGQAMLAHLGMSGQMLVQPDDAPDEKHLRVR------------FRFADNGPE 108
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
L F D+R F + L D T++P I+ + D + +D+ +L ++ IK
Sbjct: 109 LRFVDQRTFGGLALAELTEVDGTALPGTIAHIARDPMDPRFDLDQAVRALRSRRTEIKRA 168
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L+++K+H + L+ T+L EV+ AL G S
Sbjct: 169 LLDQTLVSGIGNIYADEALWRSKLHWARPTDKLTAAHGRTVLTAAGEVMAAALVAGGTS 227
>gi|430756265|ref|YP_007208587.1| Formidopyrimidine DNA glycosylase [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430020785|gb|AGA21391.1| Formidopyrimidine DNA glycosylase [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 280
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + +E K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A +HP A LS ++ TL IK +++A++ G +
Sbjct: 169 KTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYI 228
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + + QK
Sbjct: 229 NSQGEIGMFQLQHFVYGKKDEPCKNC--GTMISKIVVGGRGTHFCAKCQK 276
>gi|410943260|ref|ZP_11375001.1| formamidopyrimidine-DNA glycosylase [Gluconobacter frateurii NBRC
101659]
Length = 294
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 127/290 (43%), Gaps = 26/290 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R G++I + + + D + G+ +LS HR+ K
Sbjct: 18 MPELPEVETVMRGFRTAFEGQRIRHVTVNRPD--LRWPFPLDLRERLEGQDVLSFHRRAK 75
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +R+ + GM+G + + +S + T PSK+ +E ++G
Sbjct: 76 YILMRVGNGTSMMLHLGMSGRLLLG--------QSGMNTT---PSKHEHLVLETENGARA 124
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
D RRF V L+ + + +S LG + L E MT + K+ IK LLDQ
Sbjct: 125 GLVDPRRFGMVDLVATDQENAHRLLSGLGIEPLSEDMTGPYLHSLMQGKRTPIKTALLDQ 184
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
I G+GN E L+++ IHP + A+SLSK +L I+ ++ +A+ G S +
Sbjct: 185 RLIVGLGNIYVCEALFRSHIHPTRMAMSLSKREANSLAASIQAILTEAIASGGSSLRDYV 244
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE + G + IT GR+T Y QK
Sbjct: 245 QADGTKGGFQDLHLVYGREGEACLKCGTGYPVSRITQAGRSTFYCANCQK 294
>gi|282891369|ref|ZP_06299871.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174999|ref|YP_004651809.1| formamidopyrimidine-DNA glycosylase [Parachlamydia acanthamoebae
UV-7]
gi|281498866|gb|EFB41183.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479357|emb|CCB85955.1| formamidopyrimidine-DNA glycosylase [Parachlamydia acanthamoebae
UV-7]
Length = 275
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCI-GKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE R + E + G+ I K+ I + + I S S F ++G+ IL+ R+G
Sbjct: 1 MPELPEVETITREMREAKLEGRTIEKAQIFWE-RTIATPSPSIFSKKIVGQKILNISRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + L L MTG I A Q K P + + + LDDG
Sbjct: 60 KFIILTLSKESL-LIHLRMTGKFLI---AKEQIK----------PDSHERVRLFLDDGRI 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L + D+R+F K L+ +P V + LG + L E T+ F L+ IK LLDQ
Sbjct: 106 LRYEDQRKFGKWYLVKNPDEV--LGALGIEPLSENFTLSTFQKILTGHHRQIKPFLLDQH 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE-VGADSSQFPS 238
YI+G+GN DE L+ +KIHPL++ +L+K+ L + I V++ ++ +G +
Sbjct: 164 YIAGLGNIYVDEALWVSKIHPLRSVSTLTKKEIKALHEAIPIVLQTGIKNIGTSLGAARA 223
Query: 239 NWIFHSREKKPGKAFVD------------GKKIDFITAGGRTTAYVPELQ 276
N+ S + + ++ I +T G R T Y P Q
Sbjct: 224 NYFSVSGRRGSNQNALNVFRKDGLPCPRCNTTIKKMTVGQRGTHYCPVCQ 273
>gi|411004905|ref|ZP_11381234.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces globisporus C-1027]
Length = 286
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 117/240 (48%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E G+ + + + V ++ DF A + G A R+G
Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARFGPALRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LW+ ++ GM+G + V+ D K+ + + DD L
Sbjct: 61 KYLWVPIEEASASLLGHLGMSGQLL-------------VQPADAPDEKHLRIRMRFDDAL 107
Query: 119 --ELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L +P+ D F +L ++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHGNTPDGLPDTIAHIARDPL-DPLFDDAAFHTALRLRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++AK+H + +L++ A LL ++V+ AL G S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRAKLHYDRPTATLTRPKSAELLGHARDVMNAALAQGGTS 226
>gi|172058210|ref|YP_001814670.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sibiricum
255-15]
gi|229541071|sp|B1YKA0.1|FPG_EXIS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|171990731|gb|ACB61653.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sibiricum
255-15]
Length = 276
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 135/291 (46%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E GK I S+ K+I G+ + F ++ + I R+GK
Sbjct: 1 MPELPEVETVRRSLERTVSGKTI-SSVKVFHPKMIRGMEVAPFVDALKQERIERVERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D +F + + ++G Y ++ KD K++ DG EL
Sbjct: 60 FLLFTFD-------RFYLVSHLRMEG-KYFPYPQAIEKD------KHTHVIFRFTDGSEL 105
Query: 121 SFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKIT-IKALLLD 177
+ D R+F + L T SVPP+++L + T + ++L +KK + IK LLD
Sbjct: 106 HYNDVRKFGTMELREKETAMSVPPLAQLEREPFDPTFTAEVLAENLIRKKRSPIKTSLLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
QS G+GN DE L+ A++HPL A +L+ + + + +V+ KA+E G +
Sbjct: 166 QSIFLGLGNIYVDETLFAARVHPLTKAGALTLDDISRIHAAGVDVLAKAVESGGSTIRSY 225
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+F + + P G I+ I GGR T + P Q++
Sbjct: 226 VSPTGKGEFQLQLAVYGQTGAPCPR--CGTAIEKIKVGGRGTHFCPTCQQV 274
>gi|383649280|ref|ZP_09959686.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces chartreusis NRRL 12338]
Length = 283
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 24/240 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + ++ + V ++ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG- 117
K LWL L D+ GM+G + ++ DE K+ + V +D
Sbjct: 61 KYLWLPLEDTDQSILAHLGMSGQLLVQPQTAP----------DE---KHLRIRVRFNDSP 107
Query: 118 -LELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
EL F D+R F + L N P +P I+ + D L + DE F +L +K+ TIK
Sbjct: 108 DTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLFD----DEAFHQALRRKRSTIKR 163
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A+IH + + ++ LL +++V+ AL VG S
Sbjct: 164 ALLDQSLISGVGNIYADEALWRARIHYERPIATFTRPRTLLLLGHVRDVMNAALAVGGTS 223
>gi|379727018|ref|YP_005319203.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius
DAT561]
gi|376317921|dbj|BAL61708.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius
DAT561]
Length = 274
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 34/293 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + + +GK I + + +++I+ F+ ++G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLTQLVVGKTICEVAVLW-SRIIEQPEVETFQKQLIGQKIKRIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + + ++G T K D+ +K++ D +L
Sbjct: 60 FLIFKLTN-------WDLISHLRMEGKYETHQK-------DDPITKHTHVIFTFSDDSQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + I+ LGP+ LE V+EF +L+K IK LLL+Q
Sbjct: 106 RYLDVRKFGRMALIPKDKSNEYKGIALLGPEPTLETFHVEEFQKNLAKYHKAIKPLLLEQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
++G+GN DE L+ AKIHP + A +LS L K I +++ +A++ G
Sbjct: 166 KLVTGLGNIYVDEALWTAKIHPEKPANTLSVSEVNRLHKAIIDILTQAVKAGGTTIRSYL 225
Query: 231 -----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
A + Q N + ++ KP I I R T + P QKL
Sbjct: 226 NALGEAGTFQLALN--VYGQKDKPCACC--ATPIQKIKVAQRGTHFCPHCQKL 274
>gi|52081409|ref|YP_080200.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|319647317|ref|ZP_08001539.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2]
gi|404490286|ref|YP_006714392.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|81690937|sp|Q65G93.3|FPG_BACLD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|52004620|gb|AAU24562.1| formamidopyrimidine-DNA glycosidase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52349287|gb|AAU41921.1| formamidopyrimidine-DNA glycosylase MutM [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317390664|gb|EFV71469.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2]
Length = 275
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 126/291 (43%), Gaps = 31/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + GK I ++ K+I +F + G+ I S R+G
Sbjct: 1 MPELPEVETVRRTLAGLVRGKTI-DAVDVRWTKIIKRPEEPEEFARLLAGQTIQSIGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L LD M + ++G + + DE K+ DG E
Sbjct: 60 KFLLFHLDDCV-------MVSHLRMEG-------KYGLHQNDEPLDKHVHVIFRFTDGSE 105
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + L + + P+ +LGP+ T D + L K ++K LLD
Sbjct: 106 LRYRDVRKFGTMHLFKPGEELTELPLRQLGPEPFSSEFTADYLRERLKKTNRSVKTALLD 165
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS---- 233
Q + G+GN DE L++A IHP TA L+K+ L K I + +++A+E G +
Sbjct: 166 QRTVVGLGNIYVDEALFRAGIHPEATANKLTKKQTVLLHKEIIQTLKEAVEAGGSTVRSY 225
Query: 234 -------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P K G I+ GGR T + + QK
Sbjct: 226 INSQGEIGMFQLKLFVYGRKDEPCKKC--GSPIEKTVVGGRGTHFCIKCQK 274
>gi|408529025|emb|CCK27199.1| Formamidopyrimidine-DNA glycosylase [Streptomyces davawensis JCM
4913]
Length = 286
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 117/240 (48%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ A DF + G I R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHPRAVRRHIAGADDFTHRLKGHRIGVPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKG--VAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L D+ GM+G + ++ ++ R V+ D D
Sbjct: 61 KYLWLPLEDTGQSVLAHLGMSGQLLVQPHEAPAEKHLRIRVRFAD-------------DL 107
Query: 117 GLELSFTDKRRFAKVRLL-NDPTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L N P +P I+ + D L +P+ DE F +L +K+ TIK
Sbjct: 108 GTELRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPL-DPLFDDEAFHQALRRKRTTIKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++ ++H + + + LL +++V+ AL VG S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRTRLHYDRPTATFIRPRSLELLGHVRDVMNAALAVGGTS 226
>gi|416213205|ref|ZP_11622189.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
M01-240013]
gi|325144563|gb|EGC66862.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
M01-240013]
Length = 275
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPRC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|83643461|ref|YP_431896.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396]
gi|123535001|sp|Q2SPF3.1|FPG_HAHCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|83631504|gb|ABC27471.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396]
Length = 271
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 40/294 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + H G+KI++ I + + D A+ GK +L+ R+ K
Sbjct: 1 MPELPEVETTRRGVAPHITGRKILQVNIYEPR--LRWPVPMDLPAAAQGKTVLNVTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L F GM+G + I + K V + L+ + L
Sbjct: 59 YLLINLGDDEL-LFHLGMSGNLRIVAPETPRMKHDHVD-------------ILLEGDITL 104
Query: 121 SFTDKRRFAKVRLLNDPTS-VPPISELGPDALLEPMTVDEFTDSL-----SKKKITIKAL 174
+ D RRF + LLN PT P + LGP EP++ D+F+ L ++K +K
Sbjct: 105 RYNDPRRFGCLLLLNPPTQEHPLLKHLGP----EPLS-DQFSGELLYKRSRQRKSPVKTF 159
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
L+DQ+ + G+GN A+E L+ A I P + A +S + L + +++V+ A+ +G +
Sbjct: 160 LMDQAIVVGVGNIYANEALFLAGIRPTRAAGEVSLKRYQVLAEAVRKVLSDAINMGGATL 219
Query: 235 Q-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ F + R +P V ++ I G RT+ + P Q+
Sbjct: 220 RDFVGGDGKPGYFQQTLRAYGRGGQP--CTVCQTELKEIKLGQRTSVFCPSCQR 271
>gi|418031907|ref|ZP_12670390.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|2293273|gb|AAC00351.1| formamidopyrimidine-DNA glycosidase [Bacillus subtilis]
gi|351470770|gb|EHA30891.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|407960916|dbj|BAM54156.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis BEST7613]
Length = 278
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
+PELPEVE RR + GK I I N + +F + G+ I S R+GK
Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 62
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + +E K+ + DG +L
Sbjct: 63 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDGTQL 108
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T D L+K +K LLDQ
Sbjct: 109 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A +HP A LS ++ TL IK +++A++ G +
Sbjct: 169 KTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYI 228
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + ++ +P K G I I GGR T + + Q
Sbjct: 229 NSQGEIGMFQLQHFVYGKKDEPCKNC--GTMISKIVVGGRGTHFCAKCQ 275
>gi|306825397|ref|ZP_07458737.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304432335|gb|EFM35311.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 274
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI IA + +F+ V G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMI--KTDLDEFQREVPGQVIESIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ + +DG
Sbjct: 59 YLLFFLTDKVLIS-HLRMEGKYFYY--------------PDQIPERKHAHVLIHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +L+K K IK+ LL
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFVSKKLGPEPREKNFDLQSFQVALAKSKKPIKSHLLA 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + SL++E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQSLTEEEATAVHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTIIEKFQLGGRGTHFCPQCQR 272
>gi|209883645|ref|YP_002287502.1| formamidopyrimidine-DNA glycosylase [Oligotropha carboxidovorans
OM5]
gi|337739289|ref|YP_004631017.1| formamidopyrimidine-DNA glycosylase MutM [Oligotropha
carboxidovorans OM5]
gi|386028308|ref|YP_005949083.1| formamidopyrimidine-DNA glycosylase MutM [Oligotropha
carboxidovorans OM4]
gi|229541077|sp|B6JCQ7.1|FPG_OLICO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|209871841|gb|ACI91637.1| formamidopyrimidine-DNA glycosylase [Oligotropha carboxidovorans
OM5]
gi|336093376|gb|AEI01202.1| formamidopyrimidine-DNA glycosylase MutM [Oligotropha
carboxidovorans OM4]
gi|336096953|gb|AEI04776.1| formamidopyrimidine-DNA glycosylase MutM [Oligotropha
carboxidovorans OM5]
Length = 294
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 35/303 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G +I + + A N + + +DF A + G+ + R+ K
Sbjct: 1 MPELPEVETVRRGLIPAMEGVRIAR-VTAHRNDLRFPLQ-TDFVARLGGRVVTGLGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIK-------GVAVTQYKRSAVKDTDEWPSKYSKFFVE 113
L LDS GM+G+ + + + RS + D E
Sbjct: 59 YLLADLDSGDVLLMHLGMSGSFRVAMDGGQEATPGIFHHPRSESRTHDH-------VVFE 111
Query: 114 LDDGLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITI 171
+D+G +SF D RRF ++++ D + P + LGP+ L + + K ++
Sbjct: 112 MDNGAVISFNDPRRFGYMKIVARADLEAEPFLKALGPEPLGNEFNAAMLAQACAGKATSL 171
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCA------TLLKCIKEVIEK 225
KA LLDQ ++G+GN E LY+A + P + A +L+ + A L+ I+ V+
Sbjct: 172 KAALLDQRVVAGLGNIYVCEALYRAHLSPKRRASTLASRTGAPSGHAERLVPAIRTVLNA 231
Query: 226 ALEVGADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPE 274
A+E G S + F ++ + RE +P + + T GR+T + P
Sbjct: 232 AIEAGGSSLRDHRQTTGELGYFQHSFQVYDREGEPCRTRGCKGTVKRFTQNGRSTFWCPS 291
Query: 275 LQK 277
QK
Sbjct: 292 CQK 294
>gi|337286274|ref|YP_004625747.1| formamidopyrimidine-DNA glycosylase [Thermodesulfatator indicus DSM
15286]
gi|335359102|gb|AEH44783.1| formamidopyrimidine-DNA glycosylase [Thermodesulfatator indicus DSM
15286]
Length = 267
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 38/291 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + +++ C+ + +KS K+ VS DF + G++I R+GK
Sbjct: 1 MPELPEVETIKNSLKT-CLKGQTIKSCEVSLPKL---VSPDDFAEKIKGQSINDLKRRGK 56
Query: 61 NLWLRLDSPPFPSFQFGMTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L + L + F +TG IY+ + P Y+ L+ G +
Sbjct: 57 VLLIFLRNWVL-LVHFKLTGQLIYL--------------ENPLSPPPYTHIEFSLEKG-K 100
Query: 120 LSFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F ++ L + + P + +LGP+ + +D F L+K IK LLD
Sbjct: 101 LYYADLRQFGRLVLWPVKELDECPLLKKLGPEPF--ELNIDTFFRLLNKSSRKIKTFLLD 158
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG------- 230
Q I+G+GN DE L++A +HP + A SLS E LLK IKE++ +A+ +G
Sbjct: 159 QEKITGLGNIYVDESLFRAGVHPERPANSLSFEEAQRLLKTIKEILNEAINLGGSSVRNY 218
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+S +F + + R KP K + + GR T + P QK
Sbjct: 219 VDGHGESGRFQEKHLVYGRRGKPCPK--CQKPLAYAHIAGRGTTFCPYCQK 267
>gi|386005789|ref|YP_005924068.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium tuberculosis RGTB423]
gi|380726277|gb|AFE14072.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium tuberculosis RGTB423]
Length = 289
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR ++ H G+ I + + V +D A + G I R+G
Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60
Query: 60 KNLWLRLDSPPF--PS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
K LWL LD+ P+ GM+G + + V + R +
Sbjct: 61 KYLWLTLDTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRISAL-------------- 106
Query: 113 ELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKK 167
LDDG LSF D+R F L + D + VP P++ L D L D L +K
Sbjct: 107 -LDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRK 165
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
+K LLDQ +SGIGN ADE L++AK++ A +L +L +V+ +AL
Sbjct: 166 HSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREAL 225
Query: 228 EVGADS 233
G S
Sbjct: 226 AKGGTS 231
>gi|345849800|ref|ZP_08802807.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces zinciresistens K42]
gi|345638781|gb|EGX60281.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptomyces zinciresistens K42]
Length = 286
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 120/240 (50%), Gaps = 21/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVS-ASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ A DF + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHPRAVRRHLTGADDFAHRLKGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKG--VAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L D+ GM+G + ++ ++ R V+ D D
Sbjct: 61 KYLWLPLEDTGQSVLAHLGMSGQLLVQPHEAPAEKHLRVRVRFAD-------------DL 107
Query: 117 GLELSFTDKRRFAKVRLLND-PTSVP-PISELGPDALLEPMTVDE-FTDSLSKKKITIKA 173
G EL F D+R F + L + P +P I+ + D L +P+ DE F +L +++ T+K
Sbjct: 108 GTELRFVDQRTFGGLSLHDTTPGGLPDVIAHIARDPL-DPLFDDELFVQALRRRRTTVKR 166
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQS ISG+GN ADE L++A++H + +L++ LL ++V+ AL VG S
Sbjct: 167 ALLDQSLISGVGNIYADEALWRARLHYDRPTPALTRPRVLELLGHARDVMNAALSVGGTS 226
>gi|284032687|ref|YP_003382618.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836]
gi|283811980|gb|ADB33819.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836]
Length = 284
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR + + G+ I + V ++ D F AS+ G+ + R+G
Sbjct: 1 MPELPEVEVVRRGLADFTTGRTIDAVEVLHPRPVRRHLAGPDDFAASLKGQTFAAPARRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL L S GM+G ++ V K ++ F DDG E
Sbjct: 61 KYLWLPLRSGDAVLAHLGMSGQFRVQPVGAPDEKHLRIR------------FRFADDGGE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ F D+R F + +P I+ + D +D F + ++K +K LLDQ
Sbjct: 109 VRFLDQRMFGGLSYSEGGAELPGEIAHIARDPFDPLFDLDAFVAGIRRRKTGLKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ +SG+GN ADE L++AK+H + +L +L + V+ +AL+VG S
Sbjct: 169 TLVSGVGNIYADEALWRAKLHYAKATETLKPLQAREILGHARAVMSEALDVGGTS 223
>gi|254511767|ref|ZP_05123834.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium
KLH11]
gi|221535478|gb|EEE38466.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium
KLH11]
Length = 283
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 26/293 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVL-GKAILSAHRKG 59
MPELPEVE RR + G I + AD N+ D A L G+ + R+
Sbjct: 1 MPELPEVETVRRGLSPAMEGVVIDR---ADVNRPDLRWPFPDRMADRLTGQRVERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS--KYSKFFVELDDG 117
K + L S GM+G + + G + Q+ + P+ K+ + +G
Sbjct: 58 KYILADLSSGETLLIHLGMSGRMTVSGDPLGQF-------VHDHPAVQKHDHVVFHMANG 110
Query: 118 LELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
++F D RRF + LL T+ +S LGP+ L D+ K +K+ L
Sbjct: 111 ARITFNDPRRFGAMDLLQTATAEQHKLLSVLGPEPLGNDFHEQHLIDAFKGKNTPVKSAL 170
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ 235
LDQ ++G+GN EVLY+ ++ P + A +S A L+ I++V++ A+E G S +
Sbjct: 171 LDQGIVAGLGNIYVCEVLYRGRVSPRRKAGQISAPRVAALVPIIRQVLQDAIEAGGSSLR 230
Query: 236 -----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE +P + G I IT GR++ Y + Q+
Sbjct: 231 DFRQADGELGYFQHSFDVYGREGEPCRTESCGATIKRITQSGRSSFYCAQCQR 283
>gi|375094028|ref|ZP_09740293.1| formamidopyrimidine-DNA glycosylase Fpg [Saccharomonospora marina
XMU15]
gi|374654761|gb|EHR49594.1| formamidopyrimidine-DNA glycosylase Fpg [Saccharomonospora marina
XMU15]
Length = 287
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 112/240 (46%), Gaps = 20/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGV-SASDFEASVLGKAILSAHRKG 59
MPELPEVE R +E H G+ I + V V A+DF A ++G + +A R+G
Sbjct: 1 MPELPEVEVVRAGLERHACGRVISAVDVLHPRAVRRHVPGAADFAARLVGVKLTAARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LD GM+G + ++ T + P +F D G E
Sbjct: 61 KYLWFDLDDGAALLAHLGMSGQLLVQ-----------PGGTADEPHLRVRFRFA-DGGPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPM--TVDEFT--DSLSKKKITIKA 173
L F D+R F + L +D T V P+ E +PM D T SL + +K
Sbjct: 109 LRFVDQRTFGGLSL-SDLTEVGGTPVPETIAHIARDPMDPLFDRATVSRSLRSRHTELKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L+++K+H + L+ T+L EV+ +AL G S
Sbjct: 168 ALLDQTLVSGIGNIYADEALWRSKLHWARPTDRLTARQAETVLAAAAEVMSEALAAGGTS 227
>gi|418472127|ref|ZP_13041897.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicoflavus
ZG0656]
gi|371547287|gb|EHN75677.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicoflavus
ZG0656]
Length = 286
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 23/241 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E + + + + V ++ D F + G I + R+G
Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHPRAVRRHIAGPDDFAHRLGGHRIGTPSRRG 60
Query: 60 KNLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDG 117
K LWL L D+ GM+G + ++ E P+ K+ + V D
Sbjct: 61 KYLWLPLEDTDQAVLAHLGMSGQLLVQ--------------PHETPAEKHLRIRVRFADA 106
Query: 118 L--ELSFTDKRRFAKVRLLNDPTSVPP--ISELGPDALLEPMTVDE-FTDSLSKKKITIK 172
L EL F D+R F + L + P I+ + D L +P+ DE F +L +K+ T+K
Sbjct: 107 LGTELRFVDQRTFGGLSLHDTSADGLPDVIAHIARDPL-DPLFDDEAFHLALRRKRTTVK 165
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LLDQS ISG+GN ADE L++A++H + +L++ LL +++V+ AL VG
Sbjct: 166 RALLDQSLISGVGNIYADEALWRARLHYERPTATLTRPRTTELLGHVRDVMNAALAVGGT 225
Query: 233 S 233
S
Sbjct: 226 S 226
>gi|385324036|ref|YP_005878475.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase;
DNA-(apurinic or apyrimidinic site) lyase MutM; AP lyase
MutM) [Neisseria meningitidis 8013]
gi|261392423|emb|CAX49968.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase;
DNA-(apurinic or apyrimidinic site) lyase MutM; AP lyase
MutM) [Neisseria meningitidis 8013]
Length = 275
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+ +A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLRRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPQC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|374849527|dbj|BAL52540.1| formamidopyrimidine-DNA glycosylase [uncultured Chloroflexi
bacterium]
Length = 266
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 27/285 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + + + ++++ I S FE + G+ IL R+GK
Sbjct: 1 MPELPEVETIARNLRP-ILSGQCIRAVQVLWPGTIAEPSVQSFEQRLPGQTILEVGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSK-FFVELDDGLE 119
L LRL I+++ Q+++ P K+ + F+ +
Sbjct: 60 YLMLRLSRDLL---------LIHLRMSGDLQWRQHGAS-----PQKHDRVLFIPDAAEVI 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L+F D R+F +V L+ DP V + LGP+ L T + L + +K LLLDQ+
Sbjct: 106 LAFHDPRKFGRVWLVQDPEKV--LGGLGPEPLDAQFTSQALEERLRGRDRRLKPLLLDQT 163
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+++G+GN ADE L++A +HPL+ A L+ E + L + I++V+ + ++ S
Sbjct: 164 FLAGLGNIYADEALHRAGLHPLRVASELTGEEVSRLWQAIRQVLLEGIQRNGASIDWVYR 223
Query: 234 -SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
QF + + + R +P + G+ I+ I R++ + Q+
Sbjct: 224 GGQFQNYFQVYGRAGQP--CYRCGQPIERIRLAQRSSYFCRGCQR 266
>gi|120437537|ref|YP_863223.1| formamidopyrimidine-DNA glycosylase [Gramella forsetii KT0803]
gi|117579687|emb|CAL68156.1| formamidopyrimidine-DNA glycosylase [Gramella forsetii KT0803]
Length = 293
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 138/277 (49%), Gaps = 19/277 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV + ++ + KIVK + D I S+FEA++L +S+ + GK
Sbjct: 34 MPELPEVAYQKIYVDSTSLHHKIVKVDMGADK--IFQSPKSEFEATLLKNEFVSSTQIGK 91
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+L + FGMTG + ++ ++ K+++ + +DG +L
Sbjct: 92 YLLLKLKEKGYLVVHFGMTGKM-------DYFQHDEIQ-------KHAQLTLTFEDGGKL 137
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SF R+F K+ L P +LGP A ++ ++F + K+ ++K L+DQS+
Sbjct: 138 SFVCPRKFGKLFLTTSPDEFRKKQKLGPHA--TEISEEDFHNLFDGKRGSVKTALMDQSF 195
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
I+G+GN DE+L+Q+ IHP + +LS + + + K + ++E + + + P +
Sbjct: 196 IAGLGNLYVDEILFQSGIHPKSKSENLSDKDLSNMFKNMVAILETVTKSKTEGNPIPDTY 255
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ + R + G KI I GGR+T + E Q+
Sbjct: 256 LRNHRNEGEACPIAKG-KIKMIKVGGRSTYFCSECQE 291
>gi|433473689|ref|ZP_20431050.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 97021]
gi|433482253|ref|ZP_20439513.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
2006087]
gi|433484236|ref|ZP_20441462.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
2002038]
gi|433486503|ref|ZP_20443698.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 97014]
gi|432209987|gb|ELK65953.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 97021]
gi|432216046|gb|ELK71929.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
2006087]
gi|432220922|gb|ELK76739.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
2002038]
gi|432221788|gb|ELK77592.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 97014]
Length = 275
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRALKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPQC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|414083233|ref|YP_006991941.1| formamidopyrimidine-DNA glycosylase [Carnobacterium maltaromaticum
LMA28]
gi|412996817|emb|CCO10626.1| formamidopyrimidine-DNA glycosylase [Carnobacterium maltaromaticum
LMA28]
Length = 284
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 114/241 (47%), Gaps = 16/241 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + G I + D + S+ F +LG+ I R+GK
Sbjct: 1 MPELPEVETVRKGLTNLVEGATIQDVDVYWDRIITAPFSSEAFRNDLLGQTIHKIERRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +D + M + ++G + V+ T K++ L DG +L
Sbjct: 61 YLIFLMDD-------WAMISHLRMEG-------KYEVEKTGTPLKKHTHVVFHLTDGRDL 106
Query: 121 SFTDKRRFAKVRLLNDPTS--VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ T P I LGP+ + E ++ F+ ++ K IK LLL+Q
Sbjct: 107 RYLDVRKFGRMTLVPIGTEHEAPGIKGLGPEPIPELFKLEPFSVAIGSKSRAIKPLLLEQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
+ G+GN DE L++AKIHPL+ A SL+ L I V+ +A+E G + +
Sbjct: 167 KIVVGLGNIYVDEALFEAKIHPLRPANSLTSIEIKNLHHSIIGVLGRAVEAGGTTIRTYQ 226
Query: 239 N 239
N
Sbjct: 227 N 227
>gi|357022644|ref|ZP_09084868.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium thermoresistibile ATCC 19527]
gi|356477633|gb|EHI10777.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Mycobacterium thermoresistibile ATCC 19527]
Length = 286
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 108/240 (45%), Gaps = 22/240 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + + V + +D A ++ I R+G
Sbjct: 1 MPELPEVEVVRRGLHEHVTGRAVAAVRVHHPRAVRRHEAGPADLTARLVDARITGTGRRG 60
Query: 60 KNLWLRLD-SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + + V + R A LDDG
Sbjct: 61 KYLWLTLDDGAEALVVHLGMSGQMLLGPVPNENHLRIAAL---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLNDPT----SVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F + + T VP P+ L D L D L K IK
Sbjct: 106 TLSFVDQRTFGGWMIADMVTVEGSEVPAPVVHLARDPLDPLFDRDAVVTVLRGKHSEIKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SGIGN ADE L++A+I+ +TA +L++ LL +V+ +AL G S
Sbjct: 166 QLLDQTVVSGIGNIYADEALWRARINGARTASALTRRRLGELLDAAADVMREALRQGGTS 225
>gi|350559985|ref|ZP_08928825.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782253|gb|EGZ36536.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 271
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 124/290 (42%), Gaps = 32/290 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E H G++I + I+ + + D + G + R+ K
Sbjct: 1 MPELPEVETTRSGLEPHLQGRRIQQLIVREPR--LRWPVPPDLAKLLSGGQVRRLDRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L D P GM+G++ R DT P + F LDDG E+
Sbjct: 59 YLLLGTDGPGV-LLHLGMSGSL-----------RRCAADTPLRPHDHLIF--RLDDGFEV 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI-SELGPDALLEPMTVDEFTDSLSK-KKITIKALLLDQ 178
D RRF L DP P+ + LGP+ L + D + LS+ ++ +KA ++DQ
Sbjct: 105 RLHDPRRFGCCLPLPDPPQHHPLLAGLGPEPLGDEFDGD-YLHCLSRGRRAPVKAFIMDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ G+GN A E L+ A I P + A LS+ C L I+ V+ +A+ G + +
Sbjct: 164 QVVVGVGNIYASEALFLAGIRPGRAAGRLSRAHCRALATSIRTVLAEAIAEGGTTLRDFV 223
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + RE P G I G R ++Y P Q+
Sbjct: 224 REDGTHGYFRQRLRVYGREGLP--CVSCGTPIRSRRIGNRASSYCPTCQR 271
>gi|197286978|ref|YP_002152850.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis HI4320]
gi|425070748|ref|ZP_18473854.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis WGLW4]
gi|238690077|sp|B4F0X6.1|FPG_PROMH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|194684465|emb|CAR46215.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis HI4320]
gi|301072215|gb|ADK56069.1| Fpg [Proteus mirabilis]
gi|301072237|gb|ADK56090.1| Fpg [Proteus mirabilis]
gi|312598039|gb|ADQ89973.1| formamidopyrimidine DNA-glycosylase [Proteus mirabilis]
gi|312598060|gb|ADQ89993.1| formamidopyrimidine DNA-glycosylase [Proteus mirabilis]
gi|404599573|gb|EKB00026.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis WGLW4]
Length = 274
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 128/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ I ++K+ VS ++L + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGN-ILHYAIVRNSKLRWPVSEKI--KTLLDEPILSVKRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L+ + GM+G++ I +E P K+ + DG
Sbjct: 58 YLLIELNQG-WIIVHLGMSGSVRIL--------------PEEQPEEKHDHIDLVFRDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF D + ++ LGP+ L KKI IK L+D
Sbjct: 103 LRYTDPRRFGAWLWCEDLATSSVLAHLGPEPLSAQFNAQYLYQQSKNKKIAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A+E L+ + I P + A SL+++ C L+ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYANEALFSSGIMPDRKASSLTEQECDVLVNAIKTVLTRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ K + G I+ I G R+T + Q
Sbjct: 223 SDGKPGYFAQELFVYGRKDK--ACLICGHTIESIKQGQRSTFFCRHCQH 269
>gi|144898444|emb|CAM75308.1| formamidopyrimidine-DNA glycosylase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 314
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 14/233 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + G + ++ + + +DF A + G+ + S R+ K
Sbjct: 37 MPELPEVETVARGLAAVWPGHRFIR--VEARRPDLRKPLPADFAARLTGRRVESVGRRAK 94
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD GM+GA+ I K +E P + DDG +
Sbjct: 95 YLLVHLDDGLTLLGHLGMSGAMVIS------------KGRNEPPGPHDHVEFVSDDGTMV 142
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
++ D RRF + L DP++ P ++ LGP+ L +L K +IKA LLDQ+
Sbjct: 143 TYRDPRRFGLMDLTLDPSTHPLLAHLGPEPLGPDFHEKALAQTLDGKGASIKAALLDQNV 202
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
++G+GN E L+ + I P + A SL L+ I+ V+E+A+ G S
Sbjct: 203 VAGLGNIYVSESLFLSGIDPTRAAGSLKPREINKLVPAIRAVLERAIAAGGSS 255
>gi|434406788|ref|YP_007149673.1| formamidopyrimidine-DNA glycosylase Fpg [Cylindrospermum stagnale
PCC 7417]
gi|428261043|gb|AFZ26993.1| formamidopyrimidine-DNA glycosylase Fpg [Cylindrospermum stagnale
PCC 7417]
Length = 282
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 37/298 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + +KI + D + S +F ++ G AI + HR+GK
Sbjct: 1 MPELPEVETVRRGLNQLTLSQKITGGDVLRDRTIAYPFSVGEFVENITGSAIATWHRRGK 60
Query: 61 NLWLRLD----SPP-FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD 115
L L SPP + MTG + D DE K+++ +
Sbjct: 61 YLLAELSPLSSSPPTWLGVHLRMTGQLLWL-------------DQDEPLHKHTRVRLFFG 107
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITI 171
D LEL F D+R F ++ + +V I ++L D TVD D L ++ I
Sbjct: 108 DRLELRFVDQRTFGQMWWVPPDVAVESIITGLAKLAIDPFSPEFTVDYLADKLLHRRRPI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLDQS ++G+GN ADE L+++ + P L ++ L I +V+ ++ G
Sbjct: 168 KTALLDQSVVAGLGNIYADEALFKSGVLPQTLCTDLQRQQIQRLQAAIIQVLSASIAAGG 227
Query: 232 DS-SQFPS-----------NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ S F + W++ +R +P + V G I I GGR++ + + QK
Sbjct: 228 TTFSNFLNVKGVNGNYGGEAWVY-NRAGEPCR--VCGNLIQRIRLGGRSSHFCTQCQK 282
>gi|410092481|ref|ZP_11289006.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas viridiflava UASWS0038]
gi|409760173|gb|EKN45335.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Pseudomonas viridiflava UASWS0038]
Length = 270
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 127/288 (44%), Gaps = 29/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I H G+++ + I+ D + D + + G+ I+ +R+ K
Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSR--LRWPIPEDLDIRLSGQRIVQVNRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++ + S GM+G + + + K V +EL+ GL L
Sbjct: 59 YLLIQAEVGTLIS-HLGMSGNLRLVEAGLPALKHEHVD-------------IELESGLAL 104
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + DP + + LGP+ L + + + K I +K ++D +
Sbjct: 105 RYTDPRRFGAMLWSLDPHAHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAV 164
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ----- 235
+ G+GN A E L+ A I P + A S+S+ L IK ++ A+E G + +
Sbjct: 165 VVGVGNIYATEALFAAGIDPRREAKSISRARYLKLAIEIKRILAYAIERGGTTLRDFIGG 224
Query: 236 ------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R +P K V G + I G R + Y P+ Q+
Sbjct: 225 DGKPGYFQQELFVYGRGDQPCK--VCGTTLREIKLGQRASVYCPKCQR 270
>gi|332687081|ref|YP_004456855.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC
35311]
gi|332371090|dbj|BAK22046.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC
35311]
Length = 274
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 34/293 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ + + +GK I + + +++I+ F+ ++G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLTQLVVGKTICEVAVLW-SRIIEQPEVETFQKQLIGQKIKRIDRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L + + + + ++G T K D+ +K++ D +L
Sbjct: 60 FLIFKLTN-------WDLISHLRMEGKYETHQK-------DDPITKHTHVIFTFSDDSQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + I+ LGP+ LE V+EF +L+K IK LLL+Q
Sbjct: 106 RYLDIRKFGRMALIPKDKSNEYKGIALLGPEPTLETFHVEEFQKNLAKYHKAIKPLLLEQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
++G+GN DE L+ AKIHP + A +LS L K I +++ +A++ G
Sbjct: 166 KLVTGLGNIYVDEALWTAKIHPEKPANTLSVSEVNRLHKAIIDILTQAVKAGGTTIRSYL 225
Query: 231 -----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
A + Q N + ++ KP I I R T + P QKL
Sbjct: 226 NALGEAGTFQLALN--VYGQKDKPCACC--ATPIQKIKVAQRGTHFCPHCQKL 274
>gi|381401573|ref|ZP_09926471.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Kingella kingae PYKK081]
gi|380833427|gb|EIC13297.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Kingella kingae PYKK081]
Length = 272
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 115/238 (48%), Gaps = 24/238 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GKKIV++I+ + SD + + I R+ K
Sbjct: 1 MPELPEVETTLRGIAPHINGKKIVQTIVRQPK--LRWQMPSDLADILQHQTIRQCTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++LD+ GM+G++ I +DT K+ +DG L
Sbjct: 59 YLLIQLDTGVL-LIHLGMSGSLRI------------FRDTLPDAGKHDHADFVFEDGTVL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFT-----DSLSKKKITIKALL 175
+ D RRF + L V EL + +EP+ DEFT D L K IK +
Sbjct: 106 RYHDPRRFGAILWL---AGVAEHHELLRNLGVEPLN-DEFTADYLFDRLRGKHRAIKLAI 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+D + + G+GN A+E L+QA I P + A SLSK+ CA L+ IK+++ A+E+G +
Sbjct: 162 MDNAIVVGVGNIYANESLFQAAISPNRPAQSLSKQECADLVAAIKQILACAIEMGGST 219
>gi|385857367|ref|YP_005903879.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
NZ-05/33]
gi|416170627|ref|ZP_11608379.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
OX99.30304]
gi|325130340|gb|EGC53106.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
OX99.30304]
gi|325208256|gb|ADZ03708.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis
NZ-05/33]
Length = 280
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 6 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 63
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 64 YLLIRFQTGVL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 113
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 114 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNA 173
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+ +A+E G
Sbjct: 174 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLRRAIETGGSTLRDFVD 233
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 234 SDGKSGYFQQEYTVYGRHNQPCPQC--GGLVVKETLGQRGTFYCPNCQK 280
>gi|432836583|ref|ZP_20070113.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE136]
gi|431381979|gb|ELG66328.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KTE136]
Length = 269
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 128/288 (44%), Gaps = 30/288 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLS--DQPVLSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L L + FGM+G++ I + P K+ + + +G L
Sbjct: 58 YLLLELPEG-WIIIHFGMSGSLRILPEELP-------------PEKHDHVDLVMSNGKVL 103
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
+TD RRF + ++ LGP+ L + + +KKK IK L+D
Sbjct: 104 RYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKL 163
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------- 233
+ G+GN A E L+ A IHP + A SLS C L + IK V+ +++E G +
Sbjct: 164 VVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQS 223
Query: 234 ----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ +P + V G I R T Y + QK
Sbjct: 224 DGKPGYFAQELQVYGRKGEPCR--VCGTPIVATKHAQRATFYCRQCQK 269
>gi|429106796|ref|ZP_19168665.1| Formamidopyrimidine-DNA glycosylase [Cronobacter malonaticus 681]
gi|426293519|emb|CCJ94778.1| Formamidopyrimidine-DNA glycosylase [Cronobacter malonaticus 681]
Length = 269
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS++ C L + IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTT 216
>gi|71083113|ref|YP_265832.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062226|gb|AAZ21229.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 287
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 13/239 (5%)
Query: 1 MPELPEVEAARRAIE---EHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHR 57
MPELPEVE ++++ EH I N+ + FE + K I R
Sbjct: 1 MPELPEVEIVKQSLSKKLEH-----KKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIY-IKGVAVTQYKRSAVKDTDEWPSKYSKFFVELD- 115
K L L F GM+G ++ IK ++++ ++ ++ P K++ VE+
Sbjct: 56 FSKYLILNFSDQSFCLIHLGMSGTVHLIKKNNISKFTNTSFYNSPSLPKKHNH--VEIHF 113
Query: 116 DGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
GL + + D RRF + + + + S LGP+ + ++ + KK IK+
Sbjct: 114 KGLRVIYNDPRRFGFFKFIENKKELEKRFSHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ ++SGIGN A E+L+ KI+P+ A L+K+ C ++ K V+ +A++ G S
Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLTKQDCKKIITYSKSVLNRAIKKGGSS 232
>gi|336395182|ref|ZP_08576581.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Lactobacillus farciminis KCTC 3681]
Length = 275
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE RR + + G+KI I N + V F V G + R+ K
Sbjct: 1 MPEMPEVETVRRGLIDQVKGRKITHVEIRYQNLITGDVD--QFVEFVTGATVTDIGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ M G R + + K+S LD+G +L
Sbjct: 59 FLLIHLDNGYTIISHLRMEG-------------RYKISNDPSAIDKHSHAIFTLDNGEKL 105
Query: 121 SFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F +++L N D ++ I +LGP+ L + T + + + + IK +LLDQ
Sbjct: 106 IYNDVRKFGRMQLWNTDDLSNNKSIQKLGPEPLSKDFTFENLKPRIIRHRKDIKTVLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
S +SG+GN DEVL++ KIHP +A L+ + +++ E + +A++ G + +
Sbjct: 166 SVMSGLGNIYVDEVLWKVKIHPETSANHLTDKDIQKIIEASNEEMRQAIQAGGSTVRSYI 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
++ + +E P +I+ I GGR T + P+ Q
Sbjct: 226 DANGHKGNMQNSLKVYGKEGTPCPRC--ETEIEKIKVGGRGTHFCPKCQ 272
>gi|325675925|ref|ZP_08155608.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707]
gi|325553163|gb|EGD22842.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707]
Length = 288
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 114/240 (47%), Gaps = 20/240 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E H +G I + V + S D + G+ ++ A R+G
Sbjct: 1 MPELPEVEVVRRGLEAHVVGHTIADVEVLHPRAVRRHLPGSLDLAGRLEGQTVVGAERRG 60
Query: 60 KNLWLRLD-SPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL L+ S GM+G + ++ V DE K+ + L+ G+
Sbjct: 61 KYLWLVLEPSSVAIVVHLGMSGQMLVQDPTVP----------DE---KHLRIRARLESGI 107
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D+R F L + D T VP ++ + D L D +L K IK
Sbjct: 108 DLRFVDQRTFGGWALADLVTVDGTVVPDSVAHIARDPLDPRFDPDLVVKALRAKHTEIKR 167
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ+ +SG+GN ADE L++A+IH + LS LL ++V+ +AL+ G S
Sbjct: 168 ALLDQTVVSGVGNIYADEALWRAEIHGNRPTDKLSGPRLRVLLDAARDVMTEALDQGGTS 227
>gi|182414188|ref|YP_001819254.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1]
gi|177841402|gb|ACB75654.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1]
Length = 287
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPEL EVE R+ + G+++ + K+ G S S ++ G + S+ K
Sbjct: 1 MPELAEVEFFRKRWDHAARGRRVTAVRLHPHAKIFRGTSPSTLRHALTGAVLESSDAAAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYSKFFVELDDGLE 119
+ R + GM+G + ++ + V DT +K++
Sbjct: 61 QMLFRFSDEIWLGVHLGMSGELRVEPAGCPAGRHDHLVLDT----AKHA----------- 105
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPI--SELGPDAL---LEPMTVDEFTDSLSKKKITIKAL 174
L F D R F +V L + PP+ +++ P L P V EF + + IKA+
Sbjct: 106 LVFNDPRMFGRVLLHRG--AEPPVWWTKIAPPILSAAFTPAAVREFLHR--RGRAPIKAV 161
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LL Q GIGNW+ADE+L++A IHP A SL++ TL + + V AL+ A
Sbjct: 162 LLMQERFPGIGNWMADEILWRAGIHPRTAAGSLTEAQSKTLWREARHVCRMALDTIAGRG 221
Query: 235 Q---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAY 271
+ P W+FH R + G+ G ++ GGRTT +
Sbjct: 222 RSLPRDLNVNIPDTWLFHHRWQPGGRCPRTGVLLERAEIGGRTTCW 267
>gi|156936197|ref|YP_001440113.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ATCC
BAA-894]
gi|389839070|ref|YP_006341154.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ES15]
gi|417792804|ref|ZP_12440119.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter sakazakii E899]
gi|429117382|ref|ZP_19178300.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 701]
gi|429120495|ref|ZP_19181170.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 680]
gi|449310290|ref|YP_007442646.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter sakazakii SP291]
gi|166215624|sp|A7MQ97.1|FPG_ENTS8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|156534451|gb|ABU79277.1| hypothetical protein ESA_04096 [Cronobacter sakazakii ATCC BAA-894]
gi|333953087|gb|EGL71074.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter sakazakii E899]
gi|387849546|gb|AFJ97643.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ES15]
gi|426320511|emb|CCK04413.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 701]
gi|426325009|emb|CCK11907.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 680]
gi|449100323|gb|AGE88357.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Cronobacter sakazakii SP291]
Length = 269
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS++ C L + IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTT 216
>gi|419523287|ref|ZP_14062867.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13723]
gi|379558018|gb|EHZ23055.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA13723]
Length = 274
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K+ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHVHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D V IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDVYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|333375898|ref|ZP_08467696.1| formamidopyrimidine-DNA glycosylase [Kingella kingae ATCC 23330]
gi|332969356|gb|EGK08381.1| formamidopyrimidine-DNA glycosylase [Kingella kingae ATCC 23330]
Length = 272
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 115/238 (48%), Gaps = 24/238 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GKKIV++I+ + SD + + + R+ K
Sbjct: 1 MPELPEVETTLRGIAPHINGKKIVQTIVRQPK--LRWQVPSDLADILQHQTVRQCTRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L ++LD+ GM+G++ I +DT K+ +DG L
Sbjct: 59 YLLIQLDTGVL-LIHLGMSGSLRI------------FRDTLPDAGKHDHADFVFEDGTVL 105
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFT-----DSLSKKKITIKALL 175
+ D RRF + L V EL + +EP+ DEFT D L K IK +
Sbjct: 106 RYHDPRRFGAILWL---AGVAEHHELLRNLGVEPLN-DEFTADYLFDRLRGKHRAIKLAI 161
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+D + + G+GN A+E L+QA I P + A SLSK+ CA L+ IK+++ +A+E G +
Sbjct: 162 MDNAIVVGVGNIYANESLFQAAISPNRPAQSLSKQECADLVVAIKQILARAIETGGST 219
>gi|421554894|ref|ZP_16000833.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 98008]
gi|421557391|ref|ZP_16003296.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 80179]
gi|402332047|gb|EJU67378.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 98008]
gi|402335029|gb|EJU70304.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 80179]
Length = 275
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 26/289 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H GK V++++ K+ ++ D + G+ +LS R+ K
Sbjct: 1 MPELPEVETTLRGIAPHIEGKT-VEAVVLRQLKLRWQIN-PDLGEILSGRQVLSCGRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GM+G++ I + + R P ++ + DG +
Sbjct: 59 YLIVRFQTGIL-LIHLGMSGSLRIFTPSDGRIGR---------PDRHDHVDIVFSDGTVM 108
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
+ D R+F + P+ E LGP+ L E D L +K +K L+D +
Sbjct: 109 RYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNA 168
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD------- 232
+ G+GN A+E L++A I P + A L K+ CA L++ +K V+++A+E G
Sbjct: 169 VVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIETGGSTLRDFVD 228
Query: 233 ----SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F + + R +P G + T G R T Y P QK
Sbjct: 229 SDGKSGYFQQEYTVYGRHNQPCPRC--GGLVVKETLGQRGTFYCPNCQK 275
>gi|119509416|ref|ZP_01628564.1| formamidopyrimidine-DNA glycosylase [Nodularia spumigena CCY9414]
gi|119465822|gb|EAW46711.1| formamidopyrimidine-DNA glycosylase [Nodularia spumigena CCY9414]
Length = 280
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 29/293 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + + +KI + D + +S F ++G AI S HR+GK
Sbjct: 1 MPELPEVETIRRGLNQLTLHQKITGGDVLLDRTIAYPLSVDKFTPKIIGSAIASWHRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L P + GV + + + +E K+++ + D EL
Sbjct: 61 YLLAELTPSP----------QTHWLGVHLRMTGQLLWVNQNEPLHKHTRVRLFFGDEQEL 110
Query: 121 SFTDKRRFAKVRLLNDPTSVPPI----SELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
F D+R F ++ + +V I ++L D TV+ L ++ IK LL
Sbjct: 111 RFVDQRTFGQMWWVPPGVAVETIMTGLAKLAVDPFSPEFTVEYLASKLQNRRRPIKTALL 170
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-SQ 235
DQS ++G+GN ADE L+++ I P+ + L E +L I +V+E ++ G + S
Sbjct: 171 DQSVVAGLGNIYADEALFKSGILPVTLCIDLQLEQIQSLHTTIIQVLETSIAAGGTTFSN 230
Query: 236 FPS-----------NWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + W++ +R +P + V I I GR++ + P+ Q
Sbjct: 231 FLNVQGVNGNYGGVAWVY-NRSGEPCR--VCSTPIQRIKLAGRSSHFCPQCQH 280
>gi|389819855|ref|ZP_10209523.1| formamidopyrimidine-DNA glycosylase [Planococcus antarcticus DSM
14505]
gi|388463115|gb|EIM05487.1| formamidopyrimidine-DNA glycosylase [Planococcus antarcticus DSM
14505]
Length = 289
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV---------IDGVSASDFEASVLGKA 51
MPELPEVE R I +GKKI ++D +V I + A F S++G
Sbjct: 1 MPELPEVEGVVRQIRPVSVGKKIEAVAVSDTIRVSKTNGKEAIIKRMEADRFIESLVGAQ 60
Query: 52 ILSAHRKGKNLW--LRLDSPPFPSFQFGMTGAIY----IKGVAVTQYKRSAVKDTDEWPS 105
I+ R+ K ++ LR D+ GM+GA + ++ + +++R
Sbjct: 61 IIRVERRSKYIYFTLRKDNEFLLVNHLGMSGAWFYIDQLQSIPEDKFRR----------- 109
Query: 106 KYSKFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEF---TD 162
+ + L DG L+F+D RRF ++R+L + PP+ + P+ E + ++ F +
Sbjct: 110 -HVHVVLTLSDGKLLAFSDIRRFGEMRVLQEEADFPPLLLMAPEPF-EAVALEHFLLRAE 167
Query: 163 SLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEV 222
S K IK +++D ISG GN A E L++ KIHP ++A +SK+ L + + +
Sbjct: 168 SSKYKNKAIKEVIMDGQVISGCGNIYATEALFKMKIHPKRSASRISKKRKVELFETVVAI 227
Query: 223 IEKALEVGADSSQFPSNW-----IFHSREKKPGKAFVD--GKKIDFITAGGRTTAYVPEL 275
+ +++E G + N +R GK G + GGR + Y P
Sbjct: 228 LLESIEAGGSTISDYRNINGESGSMQNRFGMYGKKQCADCGTATKTLKIGGRASMYCPSC 287
Query: 276 QK 277
QK
Sbjct: 288 QK 289
>gi|406576441|ref|ZP_11052070.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD6S]
gi|404461448|gb|EKA07379.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
glycosylase [Streptococcus sp. GMD6S]
Length = 274
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI +I K+I +F+ + G+ I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLLLGKKI-SNIEIRYPKMIK-TDLEEFQKELAGQVIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ + +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDKVPERKHAHVLIHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLAPDLLDAYFISKKLGPEPKDQDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A+IHP + + +L+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQIHPARPSQTLTLEEASAIHDQTIVVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
N FH K G+A G I+ + GGR T + P+ Q+
Sbjct: 224 INAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKLQLGGRGTHFCPQCQR 272
>gi|225164333|ref|ZP_03726600.1| DNA-formamidopyrimidine glycosylase [Diplosphaera colitermitum
TAV2]
gi|224801067|gb|EEG19396.1| DNA-formamidopyrimidine glycosylase [Diplosphaera colitermitum
TAV2]
Length = 288
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 135/298 (45%), Gaps = 27/298 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAIL-SAHRK 58
MPEL EVE R+ + IG +V+ + +V + +D A +L A+L + +
Sbjct: 1 MPELAEVEFFRK-LWNPGIGAAVVRVLTHPRARVFRECEGGADELARLLTGAVLDGSEAR 59
Query: 59 GKNLWLRL----------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
GK + R D + GMTGA+ ++G + Q++++A S
Sbjct: 60 GKQMIFRFRTDGGGHKCDDVYVWLGIHLGMTGALRMQGPS-EQFRQTA-----------S 107
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKK- 167
+ L F D R F +VR L P+ + TVD L ++
Sbjct: 108 DHLALVQAERVLVFNDPRMFGRVRFATGAEPPDWWISLPPEVVSREFTVDGVAAFLKRRS 167
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKA- 226
+ IKA+LL Q GIGNW+ADE+L+++ IHP Q A L+ L + + V E+A
Sbjct: 168 RAPIKAVLLMQERFPGIGNWMADEILWRSAIHPRQLAGELTPAEIRKLWRETRWVCEQAQ 227
Query: 227 LEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAA 284
+G + PS W+F R + GK G + GGRTT + P+ Q+L +AA
Sbjct: 228 ATIGETYADPPSTWLFPHRWEDGGKCPRTGAPLVREQIGGRTTCWSPKRQRLRMAKAA 285
>gi|425070436|ref|ZP_18473549.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis WGLW6]
gi|404594733|gb|EKA95289.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis WGLW6]
Length = 274
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 128/289 (44%), Gaps = 32/289 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ I ++K+ VS ++L + ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGN-ILHYAIVRNSKLRWPVSEKI--KTLLDEPILSVKRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L + L+ + GM+G++ I +E P K+ + DG
Sbjct: 58 YLLIELNQG-WIIVHLGMSGSVRIL--------------PEEQPEEKHDHIDLVFRDGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF D + ++ LGP+ L KKI IK L+D
Sbjct: 103 LRYTDPRRFGAWLWCEDLATSSVLAHLGPEPLSAQFNAQYLYQQSKNKKIAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS------ 233
+ G+GN A+E L+ + I P + A SL+++ C L+ IK V+ +++E G +
Sbjct: 163 LVVGVGNIYANEALFSSGIMPDRKANSLTEQECDVLVNAIKAVLTRSIEQGGTTLKDFLQ 222
Query: 234 -----SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + R+ K + G I+ I G R+T + Q
Sbjct: 223 SDGKPGYFAQELFVYGRKDK--ACLICGHTIESIKQGQRSTFFCRHCQH 269
>gi|350267085|ref|YP_004878392.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349599972|gb|AEP87760.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 276
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 29/290 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK I I N + +F ++ G+ I S R+GK
Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD + M + ++G + + +E K+ + D +L
Sbjct: 61 FLLFHLD-------HYVMVSHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDETQL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L + P+S+LGP+ E T + L+K +K LLDQ
Sbjct: 107 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A +HP A LS ++ TL IK +++A++ G +
Sbjct: 167 KTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYI 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + ++ +P K G I I GGR T + + QK
Sbjct: 227 NSQGEIGMFQLQHFVYGKKDEPCKNC--GTMISKIVVGGRGTHFCAKCQK 274
>gi|444911512|ref|ZP_21231687.1| Formamidopyrimidine-DNA glycosylase [Cystobacter fuscus DSM 2262]
gi|444718270|gb|ELW59086.1| Formamidopyrimidine-DNA glycosylase [Cystobacter fuscus DSM 2262]
Length = 286
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 131/286 (45%), Gaps = 30/286 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ARR + G+++VK+ ADD ++ G DF AS+ G+ +LS R+GK
Sbjct: 1 MPELPEVEIARRHLVHWLDGRRVVKAE-ADDTRIFRGARWKDF-ASLWGR-LLSLERRGK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + GM+G V+ + P YS+ LD +
Sbjct: 58 YLLFSFEEDRGLLAHLGMSGRF--------------VRRPPDAPVPYSRARFHLDSKDVV 103
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R ++ + ++ PI LG D L + + V D++ K +K L+DQ
Sbjct: 104 HFADARMLGRMETCPASHLHALAPIQALGFDPLADGLDVARLRDAVGNSKQELKVALMDQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL-------EVGA 231
++G+GN A E L+++ +HP + SL+ L + ++ ++ L EV
Sbjct: 164 GRVAGLGNIHAAEALFRSGLHPSRPPASLTDAEWKRLARGVRAALDFGLQEQQAEEEVRY 223
Query: 232 DSSQFPSNWIFHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQ 276
+ ++ + R G A V G ++ +T GGRTT + P Q
Sbjct: 224 LKEGGRNGFLVYGRA---GTACVRCGTTVESVTQGGRTTHFCPSCQ 266
>gi|333920820|ref|YP_004494401.1| fomramidopyrimidine-DNA glycosylase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483041|gb|AEF41601.1| Formamidopyrimidine-DNA glycosylase [Amycolicicoccus subflavus
DQS3-9A1]
Length = 292
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 122/252 (48%), Gaps = 35/252 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA--SDFEASVLGKAILSAHRK 58
MPELPEVE RR +E H + ++I +S+ + + +A +D + G+A A R+
Sbjct: 1 MPELPEVEVVRRGLESHALRQQI-ESVEVRHPRAVRRHAAGPADLAGRLAGRAFSGAFRR 59
Query: 59 GKNLWLRL------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
GK LWL L ++ GM+G + ++ D +++ V
Sbjct: 60 GKYLWLTLAEKNPDEAADSVLVHLGMSGQMLVQA-------------ADAPMEPHARIVV 106
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVP---------PISELGPDALLEPMTVDE--FT 161
LD G L F D+R F + +VP PI + D L +P+ DE
Sbjct: 107 TLDGGTHLRFVDQRTFGGWLVAPLVPAVPDSAGELLPQPIVHIARDPL-DPL-FDERAVI 164
Query: 162 DSLSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKE 221
+ + +K IK +LLDQS ISG+GN ADE L++A IH ++A SLS+ T+L +E
Sbjct: 165 EVIRRKPSEIKRILLDQSVISGVGNIYADEALWRAGIHGNRSARSLSRAKIRTILFAARE 224
Query: 222 VIEKALEVGADS 233
V+ +AL G S
Sbjct: 225 VMIEALAQGGTS 236
>gi|188586505|ref|YP_001918050.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351192|gb|ACB85462.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 295
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 23/298 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++++ G +I + I ++ +S DF+ SV+ I R+GK
Sbjct: 1 MPELPEVETIKKSLLSDLTGDRISRVEIYFPG-MLQNMSPEDFKESVISNQIKDVKRRGK 59
Query: 61 NLWLRL-------DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF--F 111
L + + D MTG + +K V K D +E +Y
Sbjct: 60 YLLIYVSCNGKMKDQVKVIIIHLRMTGRLILKNNEVE--KSHNHLDDEEIIQEYRHLRCL 117
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKI 169
+L G+ L F D+R+F + L+N ++ LGP+ L E ++F + K K
Sbjct: 118 FQLQSGITLEFHDQRKFGTMALVNQGEEFYWKGLANLGPEPLSEEFDYEDFYKGVKKSKK 177
Query: 170 TIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV 229
IK +LLDQ ++GIGN ADEVL+ + IHP + L+++ +L K I +++E ++
Sbjct: 178 PIKGILLDQKLVAGIGNIYADEVLFASGIHPARKGEELTEQEVGSLYKTIIQILELGIKY 237
Query: 230 GA-------DSSQFPSNW--IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
DS N+ + + + + +++ R T Y P Q L
Sbjct: 238 RGTTFSDYRDSEGNKGNFQDLLKVFNRNKEECLICRREVQKTKVANRGTYYCPNCQPL 295
>gi|149019561|ref|ZP_01834880.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP23-BS72]
gi|418102690|ref|ZP_12739766.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
NP070]
gi|419475363|ref|ZP_14015203.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA14688]
gi|419486519|ref|ZP_14026285.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44128]
gi|421206422|ref|ZP_15663483.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2090008]
gi|421208791|ref|ZP_15665813.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070005]
gi|421224837|ref|ZP_15681581.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070768]
gi|421229615|ref|ZP_15686287.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2061376]
gi|421240527|ref|ZP_15697074.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2080913]
gi|421291843|ref|ZP_15742581.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA56348]
gi|147930936|gb|EDK81916.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
SP23-BS72]
gi|353776856|gb|EHD57331.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
NP070]
gi|379560908|gb|EHZ25929.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA14688]
gi|379588134|gb|EHZ52980.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA44128]
gi|395575747|gb|EJG36312.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070005]
gi|395576336|gb|EJG36892.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2090008]
gi|395590625|gb|EJG50929.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2070768]
gi|395596276|gb|EJG56496.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2061376]
gi|395609109|gb|EJG69199.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
2080913]
gi|395894060|gb|EJH05041.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae
GA56348]
Length = 274
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R +E+ IGKKI SI K+I +F+ + + I S R+GK
Sbjct: 1 MPELPEVETVCRGLEKLIIGKKI-SSIEIRYPKMIK-TDLEEFQRELPSQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQGPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D IS+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A+IHP + + +L+ E + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQIHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+ V G I+ I GGR T + P Q+
Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECVRCGTIIEKIQLGGRGTHFCPNCQR 272
>gi|332670941|ref|YP_004453949.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484]
gi|332339979|gb|AEE46562.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484]
Length = 302
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 26/250 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE R + H +G+ + + D V V DF + G+ + +A R+G
Sbjct: 1 MPELPEVETVRDGLARHVLGRTVTDVAVHRDYSVRRHVEGPLDFAGRLAGRRLDAAVRRG 60
Query: 60 KNLWLRLDSPPFPSF-QFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + + RSA DE + + + LDDG
Sbjct: 61 KFLWLLLDDEDAALMAHLGMSGQLLV---------RSAQDLRDEVRHPHLRVRLALDDGS 111
Query: 119 ELSFTDKRRFAKVR---LLNDPTSVP------------PISELGPDALLEPMTVDEFTDS 163
L F D+R F + L+ P P P++ + D L + ++
Sbjct: 112 ALDFVDQRTFGHLSVPDLVPTPDGAPGGLGSGRAVVPAPVTHIARDLLDPSLDRPALVEA 171
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
+ ++ IK LLDQ+ +SGIGN ADE L++A++H + +L + L +EV+
Sbjct: 172 VRARRTGIKRALLDQALVSGIGNIYADEGLWRARLHYARPTDTLRRAEVERALDGAQEVM 231
Query: 224 EKALEVGADS 233
AL G S
Sbjct: 232 TAALAQGGTS 241
>gi|424801640|ref|ZP_18227182.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 696]
gi|423237361|emb|CCK09052.1| Formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii 696]
Length = 267
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G+ I+ +++ + SD ++ K ILS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRL---RWPVSDEIHALSDKPILSVQRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I +E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIIHLGMSGSLRIL--------------PEERPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF + ++ LGP+ L + + +KKK+ IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS++ C L + IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSEKECELLAQAIKAVLLRSIEQGGTT 216
>gi|227524688|ref|ZP_03954737.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii
ATCC 8290]
gi|227088172|gb|EEI23484.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii
ATCC 8290]
Length = 280
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 40/298 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + E G +I +++ K+I+ + DF ++ + I R+GK
Sbjct: 1 MPELPEVETVRRGLTELVAGSQI-RTVDVLYPKMIN-LPPEDFTNALKNQIIKKIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-----SKYSKFFVELD 115
L++R+++ G+ + + R K D P SK++ L
Sbjct: 59 YLFIRINN-----------------GLTIVSHLRMEGK-YDVEPEGTPLSKHTHIVFHLT 100
Query: 116 DGLELSFTDKRRFAKVRLLN--DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
DG +L + D R+F ++ L++ +V + +GP+ +T+D K K +K
Sbjct: 101 DGRQLRYNDTRKFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKP 160
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE----- 228
LLDQS I+G+GN ADEVL+ +KI+P Q +LS L K I + I++A++
Sbjct: 161 FLLDQSNIAGLGNIYADEVLWLSKINPKQPVNTLSVVELKLLRKSIIDEIKRAIDGHGTT 220
Query: 229 ------VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNG 280
++ F ++ + R+ +P G I+ I R T + P Q ++G
Sbjct: 221 VHSYSNAYGEAGNFQNHLNVYGRQGEP--CLRCGTPIEKIKLAQRGTHFCPNCQVIHG 276
>gi|419778936|ref|ZP_14304817.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK10]
gi|383186700|gb|EIC79165.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis SK10]
Length = 274
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E+ +GKKI S+ K+I +F+ V + I S R+GK
Sbjct: 1 MPELPEVETVRRGLEKLILGKKI-SSLEIRYPKMIK-TDLDEFQREVPDQIIESMGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L S M G + D+ P K++ F +DG
Sbjct: 59 YLLFYLTDKVLIS-HLRMEGKYFYY--------------PDQVPERKHAHVFFHFEDGGT 103
Query: 120 LSFTDKRRFAKVRLLN-DPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F + LL D +S+ LGP+ + + F +L+K K IK+ LLD
Sbjct: 104 LVYEDVRKFGTMELLVPDLLDAYFVSKKLGPEPREQDFDLQVFQAALAKSKKPIKSHLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFP 237
Q+ ++G+GN DEVL++A++HP + + +L+ E + + V+ +A+E G + +
Sbjct: 164 QTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEASAIHDQTIAVLGQAVEKGGSTIRTY 223
Query: 238 SNWI--------FHSREKKPGKAFVD-GKKIDFITAGGRTTAYVPELQK 277
+N FH K G+A G I+ GGR T + P+ Q+
Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQACSRCGTVIEKFQLGGRGTHFCPQCQR 272
>gi|450091416|ref|ZP_21855482.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans W6]
gi|450150650|ref|ZP_21876685.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 14D]
gi|449219372|gb|EMC19341.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans W6]
gi|449233279|gb|EMC32356.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans 14D]
Length = 273
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 127/292 (43%), Gaps = 35/292 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E +GKKIV + V GV DF+ +LG+ S R+GK
Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVE--DFQLDILGQTFKSIGRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWP-SKYSKFFVELDDGLE 119
L L L+ S M G + DE P +K+ F LD G
Sbjct: 59 YLLLNLNRQTIIS-HLRMEGKYLL--------------FEDEVPDNKHFHLFFGLDGGST 103
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L + D R+F LL + + ++GP+ + + F + L+K IK LLLD
Sbjct: 104 LVYQDVRKFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLD 163
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE--------- 228
Q ++G+GN DEVL+ AK+ P + A L K + +++ A+E
Sbjct: 164 QHLVAGLGNIYVDEVLWAAKVDPERLASQLKKSEIKRIHDETIRILQLAIEKGGSTIRSY 223
Query: 229 ---VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+G D S ++ ++ + I+ I GGR T + P QK
Sbjct: 224 KNSLGEDGSMQDCLQVYGKTDQPCARC---ATPIEKIKVGGRGTHFCPSCQK 272
>gi|56964473|ref|YP_176204.1| formamidopyrimidine-DNA glycosylase [Bacillus clausii KSM-K16]
gi|81678825|sp|Q5WEG7.3|FPG_BACSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase MutM; Short=AP lyase MutM
gi|56910716|dbj|BAD65243.1| formamidopyrimidine-DNA glycosylase [Bacillus clausii KSM-K16]
Length = 276
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + + K I + + + F + G+ I R+GK
Sbjct: 1 MPELPEVETVRRTLLQLVKNKTIADVDVGWPKMIKEPDDVERFIQLLKGQTIEDIGRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ + + + ++G + + TDE +K++ DG EL
Sbjct: 61 FLLFVLND-------YVLVSHLRMEG------RYGLYQPTDE-KTKHTHVVFSFTDGSEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L P+++LG + E TV+ + +K IK LLDQ
Sbjct: 107 RYADVRKFGTMHLFAKGAEHVAMPLAQLGVEPFSEQFTVELLEQAYAKTTRAIKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L+ A IHP +TA SLSKE L K IK +++A+E G S
Sbjct: 167 KTVVGLGNIYVDEALFHAGIHPERTASSLSKEEYHNLHKEIKRTLKEAIEAGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R+++P I+ GGR T Y P Q
Sbjct: 227 NGQGEIGMFQQQLHVYGRKQQPCHHC--DTAIEKTVVGGRGTHYCPNCQ 273
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.129 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,609,208,731
Number of Sequences: 23463169
Number of extensions: 295680628
Number of successful extensions: 1816166
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5632
Number of HSP's successfully gapped in prelim test: 11305
Number of HSP's that attempted gapping in prelim test: 1653445
Number of HSP's gapped (non-prelim): 108993
length of query: 408
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 263
effective length of database: 8,957,035,862
effective search space: 2355700431706
effective search space used: 2355700431706
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 78 (34.7 bits)