BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015345
(408 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80358|FPG_ARATH Formamidopyrimidine-DNA glycosylase OS=Arabidopsis thaliana GN=FPG1
PE=1 SV=1
Length = 390
Score = 503 bits (1296), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/340 (76%), Positives = 285/340 (83%), Gaps = 5/340 (1%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVEAARRAIEE+C+GKKI + IIADDNKVI G+S SDF+ S+LGK I+SA RKGK
Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
NLWL LDSPPFPSFQFGM GAIYIKGVAVT+YKRSAVKD++EWPSKYSKFFVELDDGLEL
Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
SFTDKRRFAKVRLL +PTSV PISELGPDALLEPMTVDEF +SL+KKKITIK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSNW 240
ISGIGNW+ADEVLYQA+IHPLQTA SLSKE C L IKEVIEKA+EV ADSSQFPS W
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSYW 240
Query: 241 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLNGVQAAKAVGKPRKQAPKGEDS 300
IFH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G A KA K P
Sbjct: 241 IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKAA----KVRPAKRGV 296
Query: 301 KDDDKYNSGDESESDGEEIAENVKSKKRQK-LGGQVKQPS 339
K + G+E E + E+ E+ KSKK QK GG+ K+P+
Sbjct: 297 KPKEDDGDGEEDEQETEKEDESAKSKKGQKPRGGRGKKPA 336
>sp|A4QFD9|FPG_CORGB Formamidopyrimidine-DNA glycosylase OS=Corynebacterium glutamicum
(strain R) GN=mutM PE=3 SV=1
Length = 286
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 124/243 (51%), Gaps = 23/243 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR +E+H +G IV + + + + + EA++ G + +A R+G
Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60
Query: 60 KNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFF 111
K LWL L D+P + GM+G + IK + D S + +
Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHLRAK 107
Query: 112 VELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKIT 170
+ELD+G E+ F D+R F L + VP +S + D L E +L +K
Sbjct: 108 IELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSRKSE 167
Query: 171 IKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG 230
IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V+ KAL G
Sbjct: 168 IKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKALAQG 227
Query: 231 ADS 233
S
Sbjct: 228 GTS 230
>sp|Q8NNV7|FPG_CORGL Formamidopyrimidine-DNA glycosylase OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=mutM PE=3 SV=3
Length = 286
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 127/246 (51%), Gaps = 29/246 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSII----ADDNKVIDGVSASDFEASVLGKAILSAH 56
MPELPEVE RR +E+H +G IV + + A N++ G + EA++ G + +A
Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGG---PEIEANIAGLRVSAAK 57
Query: 57 RKGKNLWLRL-DSPPFPS-------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYS 108
R+GK LWL L D+P + GM+G + IK + D S +
Sbjct: 58 RRGKFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIK-------------EPDAPISPHL 104
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKK 167
+ VELD+G E+ F D+R F L + VP +S + D L E +L +
Sbjct: 105 RAKVELDNGDEVWFVDQRTFGYWWLGDLVDGVPERVSHIATDVLDESADFSAIARNLKSR 164
Query: 168 KITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
K IK LLL+Q +SGIGN ADE+L+QAKIHPLQ A LS LL+ K+V+ KAL
Sbjct: 165 KSEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLARLEELLQAGKDVMTKAL 224
Query: 228 EVGADS 233
G S
Sbjct: 225 AQGGTS 230
>sp|Q8FP17|FPG_COREF Formamidopyrimidine-DNA glycosylase OS=Corynebacterium efficiens
(strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC
100395) GN=mutM PE=3 SV=3
Length = 285
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +EEH +G+ IV + + + ++ EA++ G + + +R+G
Sbjct: 1 MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG 60
Query: 60 KNLWLRLD--SPPFPS-----FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFV 112
K LWL LD + PS GM+G + VK D + + +
Sbjct: 61 KFLWLELDDVAQQAPSGLGLLVHLGMSGQML-------------VKSPDATLNPHLRARA 107
Query: 113 ELDDGLELSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
ELDDG E+ F D+R F L VP +S + D L + + + L K I
Sbjct: 108 ELDDGNEVWFVDQRTFGYWWLGELVDGVPGRVSHIARDLLDDALDIPALAAVLKTKNTEI 167
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLL+Q +SGIGN ADE+L++A IHP Q A +S LL+ +EV+ +AL+ G
Sbjct: 168 KRLLLNQEIVSGIGNIYADEMLWEAGIHPRQKASRISLTRLVALLEAGREVMTRALDQGG 227
Query: 232 DS 233
S
Sbjct: 228 TS 229
>sp|Q03GC2|FPG_PEDPA Formamidopyrimidine-DNA glycosylase OS=Pediococcus pentosaceus
(strain ATCC 25745 / 183-1w) GN=mutM PE=3 SV=1
Length = 275
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 145/291 (49%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + GK IV +++ +K++ A F + GK IL+ R+GK
Sbjct: 1 MPELPEVETVRRGLAALVEGK-IVTNVVVRYSKMVSP-KAEIFAEELEGKKILNVRRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + S + M + ++G K S V +E+ K+ ELDDG +L
Sbjct: 59 YLLIDF------SGDYTMVSHLRMEG------KYSVVDRREEY-GKHDHVIFELDDGKDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + V + +GP+ E +T++ T L +K +K+ LLDQ
Sbjct: 106 RYNDTRKFGRMNLVPTGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------V 229
S I+G+GN ADEVL+ +KIHP Q + +L+ E A L + I E ++ A+E +
Sbjct: 166 SMIAGLGNIYADEVLWLSKIHPQQISNTLTDEEIAILRESIFEELQLAIEAKGTTVFSYL 225
Query: 230 GAD--SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
AD + F + + R+ P + G I+ I R T + P Q L
Sbjct: 226 NADGHAGSFQNQLHVYHRQGLPCQRC--GTPIERIKVAQRGTHFCPHCQVL 274
>sp|A9B0X2|FPG_HERA2 Formamidopyrimidine-DNA glycosylase OS=Herpetosiphon aurantiacus
(strain ATCC 23779 / DSM 785) GN=mutM PE=3 SV=1
Length = 273
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 122/229 (53%), Gaps = 15/229 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++E+ +G+ V K++D S F ++ + I R+ K
Sbjct: 1 MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + LD+ MTG + + DE +++ V LD+G EL
Sbjct: 61 YLLIELDNHETLIVHLRMTGQMLVVA-------------ADEPADRHTHVVVALDNGREL 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISE-LGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D R+F + L+ D + V +++ LGP+ L + T+D+F LS+K IK LLDQS
Sbjct: 108 RFHDPRKFGRWSLV-DRSGVAALNQRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQS 166
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
++G+GN ADE L+ AKIHPL++A SL+ A L + IK V+ ++E
Sbjct: 167 VLAGVGNIYADEALWLAKIHPLRSANSLNANEIAELFEAIKTVLRNSIE 215
>sp|A5D0T6|FPG_PELTS Formamidopyrimidine-DNA glycosylase OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=mutM PE=3 SV=1
Length = 276
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 144/296 (48%), Gaps = 39/296 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKI--VKSIIADDNKVIDGVSASDFEASVLGKAILSAHRK 58
MPELPEVE RR ++ G KI V+ ++ KVI S+F+ ++ K IL R+
Sbjct: 1 MPELPEVETVRRTLQAKLPGLKITGVEVLLP---KVIRSPELSEFKETIADKKILKVGRR 57
Query: 59 GKNLWLRLDSPPFPSFQFGMTG-AIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
GK L + L + MTG +Y G + P++++ L +G
Sbjct: 58 GKYLLINLSEGYTLAVHLRMTGRLVYCAG--------------QDPPARHTHVIFNLSNG 103
Query: 118 LELSFTDKRRFAKVRLLNDPT----SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
+L F D R+F ++ L+ PT + I ELG + L E T + L ++ IK
Sbjct: 104 CQLHFADMRQFGRIWLV--PTDALDGLKGIKELGVEPLEELFTREFLKKELRRRHARIKP 161
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEV---- 229
LLLDQ++I+G+GN ADE L++A+I+P + A +L+ A L + I++++++ +E
Sbjct: 162 LLLDQTFIAGLGNIYADEALHRARINPERLATTLTPREIARLYRAIRDLLQEGIENRGTT 221
Query: 230 -------GADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
+ + ++RE KP G KI GGR++ Y P QK+
Sbjct: 222 VRDFIDGNGQAGNYQEFLQVYNREGKPCPRC--GDKIAKKKVGGRSSYYCPTCQKV 275
>sp|A5UUN1|FPG_ROSS1 Formamidopyrimidine-DNA glycosylase OS=Roseiflexus sp. (strain
RS-1) GN=mutM PE=3 SV=1
Length = 273
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 135/288 (46%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ A ++ +G +IV+ D ++++ S +F + G+ + R+ K
Sbjct: 1 MPELPEVQLAADSLGVQIVGARIVRVERLDWTRMVETPSPDEFITLLAGRQVHGWGRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + M+G++ V+ D P K++ + LDDG ++
Sbjct: 61 WILLFLDGGWTLALHLRMSGSL-------------TVQPADAPPDKHTHLVLRLDDGRQV 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + RLL+ + G + L TV+ + L +K IK LLLDQ+
Sbjct: 108 FFRDPRKFGRARLLDADGRAALDAAHGDEPLSNAFTVERLAELLRGRKRAIKPLLLDQAV 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN- 239
I+GIGN ADE L++A+IHPL+ A LS + A L I+ + +AL G + + N
Sbjct: 168 IAGIGNIYADEALWRARIHPLRPASDLSADEVAALHDGIRAALRQALTNGGSTLRDYRNS 227
Query: 240 ----------WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+ + RE +P G I R T Y PE Q+
Sbjct: 228 YGTRGTNQDHFNAYDREGQPCPRC--GATIIKTVVAQRGTHYCPECQR 273
>sp|P19210|FPG_BACFI Formamidopyrimidine-DNA glycosylase OS=Bacillus firmus GN=mutM PE=3
SV=3
Length = 274
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 127/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +R + E IGK I + N + + +FE ++ + I S R+GK
Sbjct: 1 MPELPEVETVKRTLTELVIGKTIAGITVKWANIIKEPADVLEFETLLMNQTIRSIRRRGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L D M + ++G R + + +E ++ DG EL
Sbjct: 61 FLLFEFDD-------IVMVSHLRMEG-------RYGLYEKEEPLPPHTHVIFHFTDGEEL 106
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + L V P++ LG + E T + ++ K IK LLDQ
Sbjct: 107 RYQDVRKFGTMHLFPKGSEEKVLPLAHLGVEPFSEQFTSELLMNAFQKTNRKIKVALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+ G+GN DE L++A+IHP + A SLSKE A L K I +E+A+E+G S
Sbjct: 167 KTVVGLGNIYVDEALFRARIHPERLAHSLSKEEMAVLHKAIVSTLEEAVEMGGSSIKSYV 226
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R+ +P + G I GGR T + P Q
Sbjct: 227 NGQGEMGMFQQKLGVYGRKNEPCRQ--CGTDILKTVVGGRGTHFCPNCQ 273
>sp|Q24XW2|FPG_DESHY Formamidopyrimidine-DNA glycosylase OS=Desulfitobacterium hafniense
(strain Y51) GN=mutM PE=3 SV=1
Length = 273
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ +H + ++I + I+ ++G F +V G S R+GK
Sbjct: 1 MPELPEVETIRRSLSQHILERRI-EEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ G +I + +T R + P K++ ++L G E+
Sbjct: 60 YLLFTLEE-----------GWSFIAHMRMT--GRMVYHAQSQEPEKHTHVVLKLSSG-EI 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + P ++ LGP+ L E + E L+ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++GIGN ADE L++A I P + A SL+KE L I +V+E+ + S +
Sbjct: 166 TLVAGIGNIYADEALFRAGIAPERCANSLTKEEIEKLYPAICQVLEEGIAANGTSFRDYQ 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R +P K G + I GR+T + P Q
Sbjct: 226 DANGERGDFQKELKVYGRGGEPCKEC--GHTLVRIRLAGRSTVFCPCCQ 272
>sp|B8FU83|FPG_DESHD Formamidopyrimidine-DNA glycosylase OS=Desulfitobacterium hafniense
(strain DCB-2 / DSM 10664) GN=mutM PE=3 SV=1
Length = 273
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 138/289 (47%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ +H + ++I + I+ ++G F +V G S R+GK
Sbjct: 1 MPELPEVETIRRSLSQHILERRI-EEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ G +I + +T R + P K++ ++L G E+
Sbjct: 60 YLLFTLEE-----------GWSFIAHMRMT--GRMVYHAQSQEPEKHTHVVLKLSSG-EI 105
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
FTD R+F +++L+ + P ++ LGP+ L E + E L+ +K+ IKA LLDQ
Sbjct: 106 HFTDTRKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ--- 235
+ ++GIGN ADE L++A I P + A SL+KE L I +V+E+ + S +
Sbjct: 166 TLVAGIGNIYADEALFRAGIAPERCANSLTKEEIEKLYPAICQVLEEGIAANGTSFRDYQ 225
Query: 236 --------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + R +P K G + I GR+T + P Q
Sbjct: 226 DANGERGDFQKELKVYGRGGEPCKEC--GHTLVRIRLAGRSTVFCPCCQ 272
>sp|A8L594|FPG_FRASN Formamidopyrimidine-DNA glycosylase OS=Frankia sp. (strain EAN1pec)
GN=mutM PE=3 SV=1
Length = 291
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 18/241 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR +E +G+ + + + V ++ +D F AS++G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLERGVVGRTVAEVEVHHLRAVRRHLAGADHFAASLVGQTVATARRRG 60
Query: 60 KNLWLRL--DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL L P P+ + G + + G Q D+ + F D+G
Sbjct: 61 KYLWLGLTPSEPGGPAVGDALLGHLGMSG----QLLVVPADSPDQVHLRVRFRFT--DEG 114
Query: 118 LELSFTDKRRFAKVRLLNDPTSVP-PISELGPDALLEPMTVD----EFTDSLSKKKITIK 172
EL F D+R F + +++ +P PI+ + PD P++VD F D+L +++ +K
Sbjct: 115 RELRFVDQRTFGGLAVVSGGAELPAPIAHIAPD----PLSVDFDPERFADALRRRRTGLK 170
Query: 173 ALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD 232
LLDQ+ ISG+GN ADE L+ A++H + ++++ LL ++ V+ AL G
Sbjct: 171 RALLDQTLISGVGNIYADEGLWAARLHYARPTETVTRAEALRLLDAVRTVMTAALAAGGT 230
Query: 233 S 233
S
Sbjct: 231 S 231
>sp|A0LV85|FPG_ACIC1 Formamidopyrimidine-DNA glycosylase OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=mutM PE=3 SV=1
Length = 284
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 14/235 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G++I + + V A+DF ++G+ I + R+G
Sbjct: 1 MPELPEVETIRRGLARHLVGRRIGYAEVFHPRAVRRHSGGAADFTGRLIGRRIQAVLRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LW LDS GM+G + A P F D E
Sbjct: 61 KYLWFALDSDLALLAHLGMSGQFLLADAASPS------------PKHLRARFAFTDGDPE 108
Query: 120 LSFTDKRRFAKVRLLNDPTSVPP-ISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
L F D+R F + L VP IS + PD L EF ++++ +K LLDQ
Sbjct: 109 LRFVDQRTFGGLTLAPLIADVPASISHIAPDILDVAFDEAEFHRRFTQRRTGVKRALLDQ 168
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ ISG+GN ADE L++A++H V +S +C LL ++ V AL G S
Sbjct: 169 TLISGVGNIYADEALWRARLHYATPTVDISAATCRRLLAALRAVFRAALRAGGTS 223
>sp|B2HJJ6|FPG_MYCMM Formamidopyrimidine-DNA glycosylase OS=Mycobacterium marinum
(strain ATCC BAA-535 / M) GN=mutM PE=3 SV=1
Length = 292
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDTALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
L K IK LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V+
Sbjct: 165 LRGKHSEIKRQLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 224 EKALEVGADSSQFPSNWI 241
+AL G S F S ++
Sbjct: 225 REALAKGGTS--FDSLYV 240
>sp|B0TER7|FPG_HELMI Formamidopyrimidine-DNA glycosylase OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=mutM PE=3 SV=1
Length = 277
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR++ G I K + K+ + + F ++ G+ I+ R+GK
Sbjct: 1 MPELPEVETVRRSLAGRITGLTIEK-VELRLPKIAFALPGTLFTDALRGRRIIELGRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD MTG + + R ++ E ++ FF LDDG L
Sbjct: 60 YLLLHLDGDETLVIHLRMTGRLI--------HLRPEEREEPEAAHTHAVFF--LDDGSLL 109
Query: 121 SFTDKRRFAKVRLLNDPTSV--PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+TD R+F + L+ ++ P LGP+ L + + +F ++L K+K +K LLLDQ
Sbjct: 110 RYTDVRQFGTLTLMTREAALRQPGKGRLGPEPLGQDFSFVDFRNALVKRKTKLKPLLLDQ 169
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
S+++G+GN ADE L +A++HP +TA SL E L CI+ V+++ ++ S
Sbjct: 170 SFLAGLGNIYADEALARARLHPDRTADSLDDEESRRLYDCIRTVLQEGIDAKGTSFRDYV 229
Query: 234 ------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
+F + R P + G +I GR+T + P QK
Sbjct: 230 DGEGRKGEFQEKLWVYGRGGNPCRRC--GGEILREKRAGRSTHFCPRCQK 277
>sp|A0PQ49|FPG_MYCUA Formamidopyrimidine-DNA glycosylase OS=Mycobacterium ulcerans
(strain Agy99) GN=mutM PE=3 SV=1
Length = 292
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 122/258 (47%), Gaps = 35/258 (13%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +++H +GK + + V +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60
Query: 60 KNLWLRLDSPPFPS----------FQFGMTGAIYIKGVAVTQYKR-SAVKDTDEWPSKYS 108
K LWL LD+ + GM+G + + GV ++ R SAV
Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGVPRAEHVRISAV----------- 109
Query: 109 KFFVELDDGLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDS 163
LDDG LSF D+R F +L + D + VP P++ L D L VD
Sbjct: 110 -----LDDGTVLSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKV 164
Query: 164 LSKKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVI 223
L K +K LLDQ +SGIGN ADE L++AK+H + A +L++ +L +V+
Sbjct: 165 LRGKHSEVKRRLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQLGAVLDAAADVM 224
Query: 224 EKALEVGADSSQFPSNWI 241
+AL G S F S ++
Sbjct: 225 REALAKGGTS--FDSLYV 240
>sp|Q74EG5|FPG_GEOSL Formamidopyrimidine-DNA glycosylase OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=mutM PE=3 SV=3
Length = 271
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 133/291 (45%), Gaps = 34/291 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R I H G++ V ++ A K+ + + + G+ I R+ K
Sbjct: 1 MPELPEVETTLRGIAPHVTGRR-VTAVTARAAKLRLPIP-PELGERLTGRVIERVERRAK 58
Query: 61 NLWLRL-DSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
L LR D GMTG + V P KY + LDDG
Sbjct: 59 YLLLRCGDGTAI--IHLGMTGTLR-------------VAPAGSPPGKYDHLDLVLDDGRT 103
Query: 120 LSFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKK-ITIKALLLD 177
L F D R+F V +DP + P +++LGP+ P+ + S S+K+ IK LL+D
Sbjct: 104 LRFRDPRKFGLVLWTGSDPLAHPLLAQLGPEPF-PPLFNGSYLFSRSRKRNAAIKLLLMD 162
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG------- 230
+ G+GN A+E L++A+IHP + A SLS+E CATL + +V+ A+ G
Sbjct: 163 NRIVVGVGNIYANEALFRARIHPERAAGSLSEEDCATLATAVGDVLRDAIAEGDTTLHEF 222
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S F N + + KP V G I I G R+T + P QK
Sbjct: 223 IATEVPSGYFRINPAVYGQTGKP--CTVCGTPIARIRLGNRSTWFCPVCQK 271
>sp|A4J4X3|FPG_DESRM Formamidopyrimidine-DNA glycosylase OS=Desulfotomaculum reducens
(strain MI-1) GN=mutM PE=3 SV=1
Length = 277
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 135/291 (46%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILS-AHRKG 59
MPELPEVE R++E+H G ++ S+ +VI F ++G+ R+G
Sbjct: 1 MPELPEVETIVRSLEKHLSGL-VITSVDLFKPEVIRTPRVDIFTDQIVGRQFQKKLGRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K L L + G+T I+++ R D D K++ LD+G +
Sbjct: 60 KYLLLHMSD--------GLTLVIHLRMTG-----RLIYCDADLPLEKHTHVIFHLDNGKQ 106
Query: 120 LSFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
L F D RRF ++ L+ + +P I E+GP+ L + + L +++ IK+LLLD
Sbjct: 107 LRFADVRRFGRMSLVPTREVPHLPGIKEMGPEPLDTAFSREYLKKELRRRRTRIKSLLLD 166
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGAD----- 232
Q +++G+GN ADE L++AKIHP + A L+ + L K I EVI ++
Sbjct: 167 QCFVAGLGNIYADEALHEAKIHPERLAPDLTSREASGLHKAIIEVISSGIKHRGTTFRDY 226
Query: 233 ------SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
S + ++RE P GK I I GR++ Y QK
Sbjct: 227 VDGEGRSGSYQHQLKVYNREGLPCPHC--GKPIQRIKVAGRSSYYCSSCQK 275
>sp|Q16DL0|FPG_ROSDO Formamidopyrimidine-DNA glycosylase OS=Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) GN=mutM PE=3 SV=1
Length = 283
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 22/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKV-IDGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + G I + AD N+ + +D A + GK + R+
Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIAR---ADVNRPDLRWPFPADMAARLTGKRVERLRRRS 57
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + + LDS GM+G + + G + Q+ S P K+ + +
Sbjct: 58 KYILMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHS-----HPAPEKHDHVVFHMANNAR 112
Query: 120 LSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
++F D RRF + L+ + + +S LGP+ L ++ + +K++LLD
Sbjct: 113 ITFNDPRRFGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFKNRNSPVKSVLLD 172
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ-- 235
Q +SG+GN E L++AKIHP++ A +S ATL+ I+EV+ +A+E G S +
Sbjct: 173 QRIVSGLGNIYVCEALFRAKIHPIRKAGKISGARVATLVPIIREVLAEAIEAGGSSLRDF 232
Query: 236 ---------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F ++ + RE P K +I I GR++ Y + Q+
Sbjct: 233 KQADGELGYFQHSFDVYGREGAPCKGEGCTGQIKRIVQSGRSSFYCAQCQR 283
>sp|A0QV21|FPG_MYCS2 Formamidopyrimidine-DNA glycosylase OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=fpg PE=3 SV=1
Length = 285
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 113/247 (45%), Gaps = 23/247 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDG-VSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH GK I + V +D A +L I R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K LWL LD GM+G + + ++DT ++ + LDDG
Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLL----------GPIRDT-----RHLRIAAVLDDGTA 105
Query: 120 LSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKAL 174
LSF D+R F +L D T VP P++ + D L D L K IK
Sbjct: 106 LSFVDQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQ 165
Query: 175 LLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSS 234
LLDQ+ +SGIGN ADE L++ KI+ + A +L + A LL EV+ AL G +
Sbjct: 166 LLDQTVVSGIGNIYADEALWRTKINGARIAAALPRRRLAELLDAAAEVMTDAL--GQGGT 223
Query: 235 QFPSNWI 241
F S ++
Sbjct: 224 SFDSLYV 230
>sp|A4FMJ7|FPG_SACEN Formamidopyrimidine-DNA glycosylase OS=Saccharopolyspora erythraea
(strain NRRL 23338) GN=mutM PE=3 SV=1
Length = 295
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 118/248 (47%), Gaps = 29/248 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASD-FEASVLGKAILSAHRKG 59
MPELPEVE RR + H +G+ + + + V V D F + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGVAAHVVGRTVSEVEVLHPRSVRRHVPGPDDFATRLAGRCLTAARRRG 60
Query: 60 KNLWLRLDSPP-------FPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSK-YSKFF 111
K +WL L P GM+G + ++ DE P + + +
Sbjct: 61 KYMWLELGGGPEEVDAGEAVLAHLGMSGQLLVQ--------------PDEAPDETHLRVR 106
Query: 112 VELDDG-LELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
DDG +L F D+R F + L D +VP P++ + PD L ++ +
Sbjct: 107 FRFDDGGPQLRFVDQRTFGGLSLTELVSVDGVAVPEPVAHIAPDPLEPVFDLEAAVARMR 166
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
K++ +K LLDQ+ +SGIGN ADE L++AK+H + +L++ TLL EV++
Sbjct: 167 KRRTGVKRALLDQTLVSGIGNIYADEALWRAKLHWARPTANLTRPQARTLLVAAVEVMQA 226
Query: 226 ALEVGADS 233
AL G S
Sbjct: 227 ALTAGGTS 234
>sp|C6BUX8|FPG_DESAD Formamidopyrimidine-DNA glycosylase OS=Desulfovibrio salexigens
(strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)
GN=mutM PE=3 SV=1
Length = 274
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + E GK I I + + V + F + V G+ I HR+ K
Sbjct: 1 MPELPEVEVISRGLAESLEGKTIESVKILNHSSV--KMPWYLFSSRVAGEKITRIHRRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L + L +F MTG R + P +++ L DG +
Sbjct: 59 LLIMDLGDDLHITFHLKMTG-------------RVLAHEGPTTPEPHTRIVFGLTDGGSI 105
Query: 121 SFTDKRRFAKVRLLNDP--TSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F +VR LN+ LGP+ L +T +E + ++ +K IK LLL+Q
Sbjct: 106 EFHDTRKFGEVRALNNEELQEWDFYKNLGPEPL--EVTAEELAERITGRKAQIKGLLLNQ 163
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
S ++G GN ADE L+++ IHP A LS ES L ++ V+++A++
Sbjct: 164 SVVAGCGNIYADESLFRSGIHPKAKASDLSNESLVKLFTELQAVLKQAIQENGSSIRDYV 223
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
G D+ F +++ + ++ +P GK + T GRT+ + QK+
Sbjct: 224 DAGGDAGGFQNSFKVYGKKGEPCPDC--GKIFEGATVAGRTSTFCSNCQKM 272
>sp|Q8Y6W7|FPG_LISMO Formamidopyrimidine-DNA glycosylase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=mutM PE=3
SV=3
Length = 273
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + K K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + ++ K GK V G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK 273
>sp|Q92BF1|FPG_LISIN Formamidopyrimidine-DNA glycosylase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=mutM PE=3 SV=3
Length = 273
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I + R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D +E +K++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDENEEVTKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N + I +LGP+ L T+ +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+HP + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVHPERAANSLSDKEINRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK + G I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTGEPCVICGTPIEKIKLNGRGTHFCPHCQK 273
>sp|Q4JUY8|FPG_CORJK Formamidopyrimidine-DNA glycosylase OS=Corynebacterium jeikeium
(strain K411) GN=mutM PE=3 SV=3
Length = 288
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 127/304 (41%), Gaps = 43/304 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +EEH +G++ + V G +S+ + + R+GK
Sbjct: 1 MPELPEVEVVRRGLEEHLVGRRFTDVQVCHPRAVRSG-EPEVLVSSLRDATVTAVKRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
LWL GM+G + V + + S + + L DG EL
Sbjct: 60 FLWLDFGEDFLLQVHLGMSGQML-------------VAEPGQVQSPHVRIRAGLSDGREL 106
Query: 121 SFTDKRRFAKVRL-------------LNDPTSVPP--ISELGPDALLEPMTVDEFTDSLS 165
F D+R F + RL + P + P +S + D L +
Sbjct: 107 CFVDQRTFGEWRLEKAVPDPWAAGAGVASPKNFLPQNVSHIAADPLEAVFDAQAAVARMK 166
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
K+ +K +LL+Q +SGIGN ADE L+ A + P ++A LS+ + +L+ EV+E
Sbjct: 167 SKRAAVKTVLLNQEVVSGIGNIYADEALFLAGVRPRRSAALLSRPTLHRVLQSAAEVMEC 226
Query: 226 ALEVGAD------------SSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVP 273
ALE G S F + + R +P K G I + GGR+T Y
Sbjct: 227 ALEQGGTSFDSLYVNVNGASGYFSRSLNVYGRGGEPCKRC--GAPIKRVVVGGRSTHYCA 284
Query: 274 ELQK 277
Q+
Sbjct: 285 TCQR 288
>sp|Q837G3|FPG_ENTFA Formamidopyrimidine-DNA glycosylase OS=Enterococcus faecalis
(strain ATCC 700802 / V583) GN=mutM PE=3 SV=3
Length = 280
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 26/291 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R+ +E+ +GK I + +I ++I+ F+ + G+ I R+GK
Sbjct: 1 MPELPEVETVRKGLEKLVVGKTI-QEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +L M + ++G + D+ +K++ DG +L
Sbjct: 60 FLIFKLSDN-------DMISHLRMEG-------KYEFHQADDEIAKHTHVMFTFTDGTQL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ N I LGP+ + + F L K IK LLLDQ
Sbjct: 106 RYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN DE L+QA+IHP Q A SL ATL + I +V+ +A+E G + +
Sbjct: 166 KLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVATLYQAIIDVLARAVEAGGTTIRTYL 225
Query: 239 NWI-----FHSREKKPGKAFVD----GKKIDFITAGGRTTAYVPELQKLNG 280
N + F G+ + G I R T Y P+ Q+L G
Sbjct: 226 NALGEAGTFQVALNVYGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKG 276
>sp|Q2YBI1|FPG_NITMU Formamidopyrimidine-DNA glycosylase OS=Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849) GN=mutM PE=3 SV=1
Length = 272
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 126/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I G+KI + + N + E ++ G I + R+GK
Sbjct: 1 MPELPEVEVVRRGIASGLEGRKIAGLTVRNPNLRW---PVPELERTLCGLEIRTVTRRGK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + GM+G++ + +A + P K+ + LD G+ L
Sbjct: 58 YLLLDCGAGTL-ILHLGMSGSLRLLALA-----------ANIAPQKHDHIDLLLDKGMVL 105
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF V + T P +S LGP+ L E + +IK +L++
Sbjct: 106 RFRDPRRFGAVLWTTGNATDHPLLSHLGPEPLTEAFDGKLLYSKTRNRSASIKEVLMNSR 165
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
+ G+GN A+E L+ A I P A + CA L + IKE + +A+E G S +
Sbjct: 166 IVVGVGNIYANEALFLAGIDPANAAGRIGARRCAGLAQAIKETLGRAIEAGGSSLRDFVG 225
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + +SR +P + G I+ I G R++ Y P QK
Sbjct: 226 SDGNPGYFQQQYWVYSRTGQPCRKC--GTNIEQIRQGQRSSFYCPRCQK 272
>sp|B9M5V2|FPG_GEOSF Formamidopyrimidine-DNA glycosylase OS=Geobacter sp. (strain
FRC-32) GN=mutM PE=3 SV=1
Length = 271
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 30/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RRA+ GK+I+ + + + + + ++G+ I++ R+GK
Sbjct: 1 MPELPEVETIRRAVGPQVRGKRIIHTNVRATK--LRHPLPPELDRLLVGQLIVAMDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LR F GMTG +Y+ VK + K+ + LD L
Sbjct: 59 YLLLRCKGGTI-IFHLGMTGMLYL------------VKASSPH-GKHDHLDLVLDGSYIL 104
Query: 121 SFTDKRRFAKVRLL-NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
FTD RRF + NDP P + GP+ L + ++KI IK L++D
Sbjct: 105 RFTDPRRFGTIIWTDNDPLQHPLLVAHGPEPLEAEFSASYLYLKRHRRKIPIKQLIMDSR 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ---- 235
++GIGN A+E L++A I P +A LS + L+ IK V+ A+E G + +
Sbjct: 165 VVAGIGNIYANESLFRAGIAPQTSASDLSPDKDLLLVDAIKGVLTDAVEAGTSNIESALT 224
Query: 236 -------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
FP + + ++ +P G I + GGR+T + P QK
Sbjct: 225 GERPQGYFPYEFSIYGKKGRPCPKC--GSAIRMMRLGGRSTFFCPLCQK 271
>sp|A0QJ66|FPG_MYCA1 Formamidopyrimidine-DNA glycosylase OS=Mycobacterium avium (strain
104) GN=mutM PE=3 SV=1
Length = 283
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + + V ++ R + LDDG
Sbjct: 61 KYLWLLLDGRDTALVVHLGMSGQMLLGAVPRAEHVRISAL---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + VP P++ L D L D L +K IK
Sbjct: 106 VLSFADQRTFGGWMLADLLEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ +SGIGN ADE L++AK+H + A +L+++ +L +V+ AL G S
Sbjct: 166 QLLDQQVVSGIGNIYADEALWRAKVHGARIADALTRKQLTAVLDAAADVMRDALAKGGTS 225
Query: 234 SQFPSNWI 241
F S ++
Sbjct: 226 --FDSLYV 231
>sp|A6TFM6|FPG_KLEP7 Formamidopyrimidine-DNA glycosylase OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=mutM PE=3
SV=1
Length = 269
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +++ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>sp|A7NQM8|FPG_ROSCS Formamidopyrimidine-DNA glycosylase OS=Roseiflexus castenholzii
(strain DSM 13941 / HLO8) GN=mutM PE=3 SV=1
Length = 283
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 13/233 (5%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEV+ ++ G +I + D ++++ S +F + G+ + R+ K
Sbjct: 1 MPELPEVQHTADSLGIQIAGARIARVERLDWTRMVETPSPDEFIRLLTGRQVRGWDRRAK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L LD + M+G++ V + P K++ + L+DG ++
Sbjct: 61 WILLFLDDGWTLALHLRMSGSL-------------TVHPAEAQPDKHTHLALRLEDGRQI 107
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D R+F + RLL+ + G + L + TV+ L +K IK LLLDQS
Sbjct: 108 FFLDPRKFGRARLLDSAGLAALDAAHGDEPLSDAFTVERLASLLRNRKRAIKPLLLDQSV 167
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
I+GIGN ADE L++A+IHPL+ A LS A L I+ + +AL G +
Sbjct: 168 IAGIGNIYADEALWRARIHPLRPAADLSAAEVAALHDGIRAALRQALANGGST 220
>sp|A5G7Q9|FPG_GEOUR Formamidopyrimidine-DNA glycosylase OS=Geobacter uraniireducens
(strain Rf4) GN=mutM PE=3 SV=1
Length = 271
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR I + +GK+I + + + D ++ + G+ I + R+GK
Sbjct: 1 MPELPEVETTRRGIAPYLVGKRICRVTVRTAKLRLP--LQPDLDSILSGRIISAVERRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L +R + GMTG + + D P ++ + L+ GL L
Sbjct: 59 YLLVRFTAGTL-ILHLGMTGNLRLV-------------QADTPPGRHDHLDLVLNSGLCL 104
Query: 121 SFTDKRRFAKVRLLND-PTSVPPISELGPDALLEPMTVDEFTDSLSKK----KITIKALL 175
TD RRF+ + +D P +++ GP EP+T D D L K +IT+K +
Sbjct: 105 RLTDPRRFSTIVWTHDDPLRHTLLAKHGP----EPLTGDFSGDYLYTKSRGRRITVKQFI 160
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
+D ++G+GN A E L++A IHP A +LS C L IKEV+ A+ G +
Sbjct: 161 MDSRVLAGVGNIYACEALFRAGIHPETPAGALSTTHCLRLADTIKEVLTDAIASGGSTLG 220
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
FP ++ + R P G I GGR+T + Q
Sbjct: 221 DFLVSEGKPGYFPMSFSVYGRNDAPCPGC--GAPIRRSRQGGRSTYFCDRCQH 271
>sp|Q71ZA3|FPG_LISMF Formamidopyrimidine-DNA glycosylase OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=mutM PE=3 SV=3
Length = 273
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 26/288 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPE+PEVE R ++E GKKI +I K+I +F ++G+ I R+GK
Sbjct: 1 MPEMPEVENVRATLQELVPGKKI-DQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L + S M G + + D E SK++ +D EL
Sbjct: 60 FLLFDLTNCTILS-HLRMEG-------------KFRLMDEKEEVSKHTHIIFHFEDHTEL 105
Query: 121 SFTDKRRFAKVRLLND--PTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D R+F + + N I +LGP+ L + T +F + K IK LLDQ
Sbjct: 106 RFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPS 238
++G+GN ADE+ ++AK+ P + A SLS + + + K ++ +A+ +G + +
Sbjct: 166 KLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYV 225
Query: 239 N-----WIFHSREKKPGK----AFVDGKKIDFITAGGRTTAYVPELQK 277
N + + K GK V GK I+ I GR T + P QK
Sbjct: 226 NSQGKLGQYQDKLKVYGKTDEPCVVCGKPIEKIKLNGRGTHFCPNCQK 273
>sp|B5XTG8|FPG_KLEP3 Formamidopyrimidine-DNA glycosylase OS=Klebsiella pneumoniae
(strain 342) GN=mutM PE=3 SV=1
Length = 269
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 19/234 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE +RR IE H +G I+ +I+ + ++ VS + S + +LS R+ K
Sbjct: 1 MPELPEVETSRRGIEPHLVGVTILHAIV-RNGRLRWPVSEEIYRLSDV--PVLSVRRRAK 57
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPS-KYSKFFVELDDGLE 119
L L L + GM+G++ I ++E P+ K+ + + +G
Sbjct: 58 YLLLELPDG-WIIVHLGMSGSLRIL--------------SEELPAEKHDHVDLVMSNGKV 102
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L +TD RRF P ++ LGP+ L + D +KKK IK L+D
Sbjct: 103 LRYTDPRRFGAWLWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNK 162
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
+ G+GN A E L+ A IHP + A SLS+E C L+K IK V+ +++E G +
Sbjct: 163 LVVGVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTT 216
>sp|A9WDC2|FPG_CHLAA Formamidopyrimidine-DNA glycosylase OS=Chloroflexus aurantiacus
(strain ATCC 29366 / DSM 635 / J-10-fl) GN=mutM PE=3
SV=1
Length = 278
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R++ G+ I D K++ S +F A + G+ I + R+ K
Sbjct: 1 MPELPEVETVARSLAPQLQGRTITGLAKLDWPKMLTP-SPDEFAALIAGRRIEAIGRRAK 59
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L LD + M+G + + A +T E +++ F ++LD+G L
Sbjct: 60 WLLLSLDGEWTLAIHLRMSGQLLV-----------AEPETSE--ARHVHFALDLDNGRRL 106
Query: 121 SFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQSY 180
F D+R+F +V LL+ + GP+ L T + L ++ IKALLLDQ
Sbjct: 107 IFNDQRKFGRVHLLDRQGLAALDAVHGPEPLAADFTPSALAERLQNRRAPIKALLLDQHL 166
Query: 181 ISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL 227
I+GIGN A+E L+ A+IHPL L+ E L I+ V+++A+
Sbjct: 167 IAGIGNIYANEALWLARIHPLTPGAMLTPEQINELHHAIRHVLQEAI 213
>sp|B1MDL2|FPG_MYCA9 Formamidopyrimidine-DNA glycosylase OS=Mycobacterium abscessus
(strain ATCC 19977 / DSM 44196) GN=mutM PE=3 SV=1
Length = 286
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 46/303 (15%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I +++ + V A + + G+ I R+G
Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60
Query: 60 KNLWLRLDSPPFPS---FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDD 116
K LWL L+ GM+G + I ++ Q+ R A LDD
Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIGPISRPQHLRIAAT---------------LDD 105
Query: 117 GLELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITI 171
G LSF D+R F + + D + +P P++ + D L E + L K I
Sbjct: 106 GSVLSFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEI 165
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKAL---- 227
K LLDQ+ +SG+GN ADE L+QA++H + +S+ +L V+ AL
Sbjct: 166 KRALLDQTVVSGVGNIYADEALWQARVHGRRLTDGMSRAKLTEVLDSAAAVMRLALAQGG 225
Query: 228 --------EVGADSSQFPSNWIFHSREKKP----GKAFVDGKKIDFITAGGRTTAYVPEL 275
V +S F + + RE +P G+A ++ F+ R++ + P
Sbjct: 226 TSFDDLYVNVNGESGYFDRSLEAYGREGEPCRRCGRAM---RREAFMN---RSSYFCPSC 279
Query: 276 QKL 278
Q+L
Sbjct: 280 QRL 282
>sp|A9HI30|FPG_GLUDA Formamidopyrimidine-DNA glycosylase OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=mutM PE=3 SV=1
Length = 286
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 37/296 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE R + H GK I + +A + +D A + G I R+ K
Sbjct: 1 MPELPEVETVMRGMRLHLDGKTIAR--VAVRRADLRFPFPADLVARLEGATITGFARRAK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ +RLD+ GM+G + + ++ P ++ FF E DG
Sbjct: 59 YILIRLDTGDTLLLHLGMSGRVLL-----------SLPGDAPVPDRHEHFFFETTDGTRC 107
Query: 121 SFTDKRRFAKVRLLNDPTS----VPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
D RRF V L+ PT+ ++ LGP+ L + + L++++ +IKA LL
Sbjct: 108 GLIDPRRFGAVDLM--PTAEERAHRLLARLGPEPLGNQFSQHWLQEVLARRRTSIKAALL 165
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
DQ+ ++G+GN E L++A IHP + A +L A L++ I+ V+ +A+ G S +
Sbjct: 166 DQTVVAGLGNIYVSEALFRAGIHPARLACTLDAAEDARLVQAIRAVLREAIAAGGSSLRD 225
Query: 236 ----------FPSNWIFHSREKK-----PGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F W + R + PG G ++ + GR++ + P Q
Sbjct: 226 YVQPDGELGYFQHAWRVYGRAGQGCPDCPGPPACHG--VERLEQAGRSSFFCPLCQ 279
>sp|Q6MCT3|FPG_PARUW Formamidopyrimidine-DNA glycosylase OS=Protochlamydia amoebophila
(strain UWE25) GN=mutM PE=3 SV=3
Length = 276
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 17/229 (7%)
Query: 1 MPELPEVEAARRAIEE-HCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKG 59
MPELPEV + +++ IGKKI+ + I K + + F V G++I + R+G
Sbjct: 1 MPELPEVHTIVQDLKQSRLIGKKIISTEIFWP-KTLAVPTPEIFCQQVQGQSIQNVDRRG 59
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLE 119
K + +L + F MTG R + S Y + ++G +
Sbjct: 60 KYIIFQLSNQMFLIVHLRMTG-------------RFQFVTSQTPASPYVRIQFNFENGDQ 106
Query: 120 LSFTDKRRFAKVRLLNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
L F D R+F + L++D + I LGP+ LL T + F D + +K +K+LLLDQS
Sbjct: 107 LRFHDTRKFGRWYLVSDVEEI--IGHLGPEPLLSSFTFELFEDMMKNRKTLLKSLLLDQS 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE 228
+I G+GN DE L++AK+HPL A ++ + L IK V+EK ++
Sbjct: 165 FIVGLGNIYVDEALWEAKLHPLIPANQINLKHLKILYHSIKYVLEKGIQ 213
>sp|A8LNK8|FPG_DINSH Formamidopyrimidine-DNA glycosylase OS=Dinoroseobacter shibae
(strain DFL 12) GN=mutM PE=3 SV=1
Length = 284
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G++I+++ I + + ++ + + GK IL R+ K
Sbjct: 1 MPELPEVETVRRGLEPVMTGQRIIEADIRRPD--LRWPLPANMQTRLEGKRILRLARRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ LDS GM+G I I G A+ + K+ ++ D G +
Sbjct: 59 YILAELDSGETLIIHLGMSGRILIHGGQAPGAFHHALPSLE----KHDHVVLDFDTGARV 114
Query: 121 SFTDKRRFAKVRLLNDPTSV---PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLD 177
F D RRF + L + T + P ++ LGP+ L T L + IK+ LLD
Sbjct: 115 VFNDARRFGAMDLC-ETTEIDQHPMLATLGPEPLGNAFHEAYLTTRLKGRMTPIKSALLD 173
Query: 178 QSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG------- 230
Q ++G+GN E L+QA I PL+ A +S+ A+L+ I+ V+ A+E G
Sbjct: 174 QKVVAGLGNIYVCEALFQAGISPLRKAGRVSETRIASLVPIIRTVLGDAIEAGGSSLRDY 233
Query: 231 ----ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
D F + + RE P + + GR++ Y P Q+
Sbjct: 234 RQTDGDLGYFQHRFRVYDRENAPCVTAGCPDVVRRVVQSGRSSFYCPSCQR 284
>sp|Q5YS09|FPG_NOCFA Formamidopyrimidine-DNA glycosylase OS=Nocardia farcinica (strain
IFM 10152) GN=mutM PE=3 SV=3
Length = 294
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 28/248 (11%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSAS-DFEASVLGKAILSAHRKG 59
MPELPEVE RR + EH G+ + I V ++ S D A + G+ + +A R+G
Sbjct: 1 MPELPEVEVVRRGLAEHVAGRVVGAVTITHPRSVRRHLAGSADLAARMTGRRVRAAQRRG 60
Query: 60 KNLWLRLDSPPFPS---------FQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKF 110
K LWL D P GM+G + ++ A K + ++
Sbjct: 61 KYLWLTFDEPGAADETALDAALVVHLGMSGQMLVQPAAAPVEKHAHIRAA---------- 110
Query: 111 FVELDDGLELSFTDKRRFAKVRLL----NDPTSVP-PISELGPDALLEPMTVDEFTDSLS 165
LDDG EL F D+R F L D + VP P++ + D L + ++
Sbjct: 111 ---LDDGSELRFVDQRTFGGWALAPLAEVDGSLVPEPVAHIARDPLDPRFDAESVVAAIR 167
Query: 166 KKKITIKALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEK 225
K IK +LLDQ+ +SGIGN ADE L++A I+ + A L++ + LL ++ V+ +
Sbjct: 168 AKNSEIKRVLLDQTVVSGIGNIYADESLWRAGINGNRLASGLTRPAVRRLLAEVRAVMLE 227
Query: 226 ALEVGADS 233
AL G S
Sbjct: 228 ALAAGGTS 235
>sp|O50606|FPG_THET8 Formamidopyrimidine-DNA glycosylase OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=mutM PE=1 SV=3
Length = 267
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ + + + D + + A G+ IL R+GK
Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQVVHRDPARYRNTALAE-------GRRILEVDRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ GMTG ++ T + R+A+ + +G L
Sbjct: 54 FLLFALEGGVELVAHLGMTGGFRLE---PTPHTRAAL----------------VLEGRTL 94
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF ++ + D +P + LGP+ L E F L + +KALLLDQ
Sbjct: 95 YFHDPRRFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQ 154
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+G+GN ADE L++A++ P + A SL++E L + ++EV+ +A+E+G +
Sbjct: 155 RLAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLYRALREVLAEAVELGGSTLSDQS 214
Query: 234 --------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + RE P A G+ ++ GR T + P Q
Sbjct: 215 YRQPDGLPGGFQTRHAVYGREGLPCPA--CGRPVERRVVAGRGTHFCPTCQ 263
>sp|Q72HN2|FPG_THET2 Formamidopyrimidine-DNA glycosylase OS=Thermus thermophilus (strain
HB27 / ATCC BAA-163 / DSM 7039) GN=mutM PE=3 SV=3
Length = 267
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + +G+ + + + D + + A G+ IL R+GK
Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQVVHRDPARYRNTALAE-------GRRILEVDRRGK 53
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L L+ GMTG ++ T + R+A+ + +G L
Sbjct: 54 FLLFALEGGVELVAHLGMTGGFRLE---PTPHTRAAL----------------VLEGRTL 94
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
F D RRF ++ + D +P + LGP+ L E F L + +KALLLDQ
Sbjct: 95 YFHDPRRFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQ 154
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS----- 233
+G+GN ADE L++A++ P + A SL++E L + ++EV+ +A+E+G +
Sbjct: 155 RLAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLYRALREVLAEAVELGGSTLSDQS 214
Query: 234 --------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
F + + RE P A G+ ++ GR T + P Q
Sbjct: 215 YRQPDGLPGGFQTRHAVYGREGLPCPA--CGRPVERRVVAGRGTHFCPTCQ 263
>sp|Q2N7Y8|FPG_ERYLH Formamidopyrimidine-DNA glycosylase OS=Erythrobacter litoralis
(strain HTCC2594) GN=mutM PE=3 SV=1
Length = 271
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI---DGVSASDFEASVLGKAILSAHR 57
MPELPEVE R + G++I +++ + DG+ + + G ++S R
Sbjct: 1 MPELPEVETTVRGLARFLQGERITRTVTNRPDMRFPFPDGLGQA-----LTGATVVSLGR 55
Query: 58 KGKNLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
+ K + D F GM+G I D DE K+ +E D
Sbjct: 56 RAKYGLIHTDRDQTMIFHLGMSGRWRI--------------DPDE-TDKHDHLLIETADH 100
Query: 118 LELSFTDKRRFAKVRLLNDPT--SVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALL 175
+ D RRF V L+ P + +GP+ L + +T++ +LS +K IK L
Sbjct: 101 -RFALCDPRRFGWVDLVGTQALDQWPGFAAMGPEPLGDALTIEHLRAALSGRKQAIKLCL 159
Query: 176 LDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS-- 233
LDQ+ ++G+GN E L+ A+IHP + +SK++ + L+ I++V+E+++ G S
Sbjct: 160 LDQAIVAGLGNIYVCEALWHARIHPRKAGGRVSKQALSLLITAIRDVLEQSIRDGGSSLR 219
Query: 234 ---------SQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + + R+ +P DG I GGR+T Y P Q+
Sbjct: 220 DYAQPDGELGYFATRFQVYGRDGQPCHR-DDGGTIRRFAQGGRSTWYCPRCQR 271
>sp|Q5ZY18|FPG_LEGPH Formamidopyrimidine-DNA glycosylase OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=mutM PE=3 SV=3
Length = 274
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ I+ H G+ I + + N+ + + GK I + R+GK
Sbjct: 1 MPELPEVETTKQGIKPHLEGRMI--TAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L +D + GM+G + I V T P K+ + +++GL L
Sbjct: 59 YILLHMDKG-YLLIHLGMSGHLRI------------VSQTAN-PQKHDHVDLHINNGLAL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ +P P ++ LGP+ L + + + K +IK+ ++D
Sbjct: 105 RFCDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQ 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ GIGN A E L+ AKIHP +A ++ E +L IK+++E A+E G + +
Sbjct: 165 IVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLR---- 220
Query: 240 WIFHSREKKPGK--------------AFVDGKKIDFITAGGRTTAYVPELQKL 278
F+S + KPG V KI+ + GR +A+ P Q +
Sbjct: 221 -DFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPI 272
>sp|Q47S77|FPG_THEFY Formamidopyrimidine-DNA glycosylase OS=Thermobifida fusca (strain
YX) GN=mutM PE=3 SV=3
Length = 296
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 16/242 (6%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVI-DGVSASDFEASVLGKAILSAHRKG 59
MPELPEVE RR +E+ +G + + V A+DF A V G + A R+G
Sbjct: 1 MPELPEVEVVRRGLEKWVVGASFGEVEVLHPRAVRRHAPGAADFAARVSGCGVTEARRRG 60
Query: 60 KNLWLRLDSPPFPSFQFGMTGAIYI--KGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDG 117
K LWL LDS GM+G + + + A ++ R + T ++ + +
Sbjct: 61 KYLWLTLDSGEALLAHLGMSGQLLVQPRHAAAERHLRVRLPLT-------ARQGHDPEAP 113
Query: 118 LELSFTDKRRFAKV---RLLNDPTS--VPP-ISELGPDALLEPMTVDEFTDSLSKKKITI 171
EL F D+R F + RL++D T +P IS + D L D F +L +K+ +
Sbjct: 114 QELRFVDQRTFGHLLVDRLVDDGTGTGLPSVISHIARDPLDPAFDEDAFAAALCRKRTEL 173
Query: 172 KALLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGA 231
K LLDQS ISGIGN ADE L+ +++H +LS+ ATLL ++EV+ AL G
Sbjct: 174 KRALLDQSLISGIGNIYADEALWMSQLHWATPTEALSRSQVATLLAAVREVMVAALAQGG 233
Query: 232 DS 233
S
Sbjct: 234 TS 235
>sp|Q88WV4|FPG_LACPL Formamidopyrimidine-DNA glycosylase OS=Lactobacillus plantarum
(strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=mutM PE=3
SV=3
Length = 274
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 30/291 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR + G I SI K+I+ F+ + + I + R+GK
Sbjct: 1 MPELPEVETVRRGLNRLVSGATIA-SIEVFWPKIINN-DVDSFKQRLANQTIQTIDRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L R F G+T +++ + K + V ++ K++ L D +L
Sbjct: 59 YLLFR--------FSNGLTMVSHLR----MEGKYNVVPRGED-QGKHTHVIFHLTDDRDL 105
Query: 121 SFTDKRRFAKVRLL--NDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F ++ L+ + +V + +GP+ + E +T+ T + K K IK LLLDQ
Sbjct: 106 LYNDTRKFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQ 165
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALE---------- 228
S I+GIGN ADE L+ +KIHP++ A SL+ + ATL + I + + A++
Sbjct: 166 SKIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225
Query: 229 -VGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL 278
++ QF ++ + RE +P + G I+ I R T + P Q+L
Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPCERC--GTIIEKIKVAQRGTHFCPLEQRL 274
>sp|A4WVR6|FPG_RHOS5 Formamidopyrimidine-DNA glycosylase OS=Rhodobacter sphaeroides
(strain ATCC 17025 / ATH 2.4.3) GN=mutM PE=3 SV=1
Length = 283
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 24/292 (8%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE RR +E G+ I ++ + + + + G+ +L R+ K
Sbjct: 1 MPELPEVETVRRGLEPAMAGRLISEARVNRPD--LRWPLPPRMAERLTGQRVLRLRRRSK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L GM+G + + G V + V D P+++ +E++ G +
Sbjct: 59 YILADLSGGESLLIHLGMSGRMLVSGARVGDF----VHD-HPAPARHDHVVLEMEGGARV 113
Query: 121 SFTDKRRFAKVRLLNDPTSV----PPISELGPDALLEPMTVDEFTDSLSKKKITIKALLL 176
+F D RRF + L+ PT P ++ LGP+ L L+ ++ +KA LL
Sbjct: 114 TFNDARRFGAMDLV--PTEAAETHPLLASLGPEPLGNAFDGAYLAARLTGRRTPVKAALL 171
Query: 177 DQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQ- 235
DQ ++G+GN EVL++A + P++ A SL + A L+ I+EV+ +A+E G S +
Sbjct: 172 DQRIVAGLGNIYVCEVLFRAGLAPVRLAGSLGEARAAGLVPIIREVLSEAIEAGGSSLRD 231
Query: 236 ----------FPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277
F + + RE +P + I GR++ + PE Q+
Sbjct: 232 YRQADGELGYFQHTFRVYGREGQPCVTPGCRGLVGRIVQSGRSSFHCPECQR 283
>sp|Q73VL9|FPG_MYCPA Formamidopyrimidine-DNA glycosylase OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=mutM
PE=3 SV=3
Length = 283
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSA-SDFEASVLGKAILSAHRKG 59
MPELPEVE RR + H +GK I + V + +D A +LG I R+G
Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60
Query: 60 KNLWLRLDSPPFP-SFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGL 118
K LWL LD GM+G + + V ++ R + LDDG
Sbjct: 61 KYLWLLLDGCDTALVVHLGMSGQMLLGAVPRAEHVRISAL---------------LDDGT 105
Query: 119 ELSFTDKRRFAKVRLLN----DPTSVP-PISELGPDALLEPMTVDEFTDSLSKKKITIKA 173
LSF D+R F L + D + +P P++ L D L L +K IK
Sbjct: 106 VLSFADQRTFGGWMLADLLEVDGSILPRPVAHLARDPLDPRFDAAAVVKVLRRKHSEIKR 165
Query: 174 LLLDQSYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADS 233
LLDQ +SGIGN ADE L++AK+H + A +++ +L EV+ AL G S
Sbjct: 166 QLLDQQVVSGIGNIYADEALWRAKVHGARIAATMTGRQLTAVLDAAAEVMRDALAQGGTS 225
Query: 234 SQFPSNWI 241
F S ++
Sbjct: 226 --FDSLYV 231
>sp|Q5X7I9|FPG_LEGPA Formamidopyrimidine-DNA glycosylase OS=Legionella pneumophila
(strain Paris) GN=mutM PE=3 SV=3
Length = 274
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE ++ I+ H G+ I + + N+ + + GK I + R+GK
Sbjct: 1 MPELPEVETTKQGIKPHLEGRIITTAQV--RNRKLRLPVPLNLNELCEGKHITAITRRGK 58
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
+ L +D + GM+G + I V+Q P K+ + +++GL L
Sbjct: 59 YILLHMDKG-YILIHLGMSGHLRI----VSQTAN---------PQKHDHVDLHINNGLAL 104
Query: 121 SFTDKRRFAKVRLLN-DPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQS 179
F D RRF ++ +P P ++ LGP+ L + + + K +IK+ ++D
Sbjct: 105 RFCDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQ 164
Query: 180 YISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVGADSSQFPSN 239
+ GIGN A E L+ AKIHP +A ++ E +L IK+++E A+E G + +
Sbjct: 165 IVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLR---- 220
Query: 240 WIFHSREKKPGK--------------AFVDGKKIDFITAGGRTTAYVPELQKL 278
F+S + KPG V KI+ + GR +A+ P Q +
Sbjct: 221 -DFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPI 272
>sp|Q8EPE6|FPG_OCEIH Formamidopyrimidine-DNA glycosylase OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=mutM PE=3 SV=3
Length = 280
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 29/289 (10%)
Query: 1 MPELPEVEAARRAIEEHCIGKKIVKSIIADDNKVIDGVSASDFEASVLGKAILSAHRKGK 60
MPELPEVE + ++ K I I N + +F+A V G+ I S RKGK
Sbjct: 1 MPELPEVETIKETLKLFVCNKTIKHIDIEWPNMIKHPDDVEEFKALVTGQTIRSMGRKGK 60
Query: 61 NLWLRLDSPPFPSFQFGMTGAIYIKGVAVTQYKRSAVKDTDEWPSKYSKFFVELDDGLEL 120
L LD ++ + + ++G + +V + K++ +G EL
Sbjct: 61 FLLFYLD-------EYVLISHLRMEG-------KYSVHSPGDPVKKHTHVTFYFSNGEEL 106
Query: 121 SFTDKRRFAKVRL--LNDPTSVPPISELGPDALLEPMTVDEFTDSLSKKKITIKALLLDQ 178
+ D R+F + + + + P+++LGPD ++ F + L + IK LLDQ
Sbjct: 107 RYNDVRKFGTMHVYPIGEEFMHKPLNQLGPDPFDTSFNLEYFYEKLKRTDRYIKTALLDQ 166
Query: 179 SYISGIGNWVADEVLYQAKIHPLQTAVSLSKESCATLLKCIKEVIEKALEVG-------- 230
S ++G+GN DE L++A +HPL+ LSK+ L KE + A++ G
Sbjct: 167 SIVTGLGNIYVDETLFRANVHPLKRCSKLSKQEVKKLQINAKETLRDAIKAGGTTIRSYV 226
Query: 231 ---ADSSQFPSNWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276
D F + + + KP + V G I I GGR T P Q
Sbjct: 227 NTQGDMGMFQQDLYVYGQHSKPCR--VCGADIIKIKVGGRGTHLCPTCQ 273
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,926,089
Number of Sequences: 539616
Number of extensions: 7197700
Number of successful extensions: 45764
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 1293
Number of HSP's that attempted gapping in prelim test: 33415
Number of HSP's gapped (non-prelim): 8364
length of query: 408
length of database: 191,569,459
effective HSP length: 120
effective length of query: 288
effective length of database: 126,815,539
effective search space: 36522875232
effective search space used: 36522875232
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)