Query 015346
Match_columns 408
No_of_seqs 132 out of 1352
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 11:00:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.8 1.8E-18 6E-23 168.8 32.5 347 42-400 6-380 (445)
2 3gia_A Uncharacterized protein 99.8 2.1E-16 7.3E-21 154.0 25.7 342 42-400 4-370 (444)
3 4djk_A Probable glutamate/gamm 99.6 2.2E-13 7.5E-18 135.1 28.2 242 40-290 7-263 (511)
4 2jln_A MHP1; hydantoin, transp 99.0 2.1E-07 7.1E-12 91.4 27.4 328 43-384 24-375 (501)
5 3dh4_A Sodium/glucose cotransp 98.5 0.00019 6.6E-09 70.8 28.4 150 41-203 17-169 (530)
6 2xq2_A Sodium/glucose cotransp 97.9 0.023 7.7E-07 56.8 29.4 148 42-202 47-197 (593)
7 2a65_A Leutaa, Na(+):neurotran 97.8 0.024 8.4E-07 55.1 27.4 221 46-267 9-281 (519)
8 4ain_A Glycine betaine transpo 64.6 1.1E+02 0.0036 29.7 17.2 24 43-66 93-116 (539)
9 4b4a_A TATC, SEC-independent p 51.4 96 0.0033 26.6 9.4 58 302-366 147-204 (249)
10 2l2t_A Receptor tyrosine-prote 34.0 70 0.0024 19.2 4.0 10 371-380 13-22 (44)
11 2wsw_A BCCT family betaine/car 31.0 3.6E+02 0.012 25.8 24.0 25 43-67 88-112 (509)
12 2jwa_A Receptor tyrosine-prote 30.1 58 0.002 19.5 3.2 7 374-380 14-20 (44)
13 2ks1_B Epidermal growth factor 21.5 1.4E+02 0.0048 17.9 4.1 11 371-381 14-24 (44)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.85 E-value=1.8e-18 Score=168.80 Aligned_cols=347 Identities=10% Similarity=0.051 Sum_probs=217.6
Q ss_pred CCCCCCHHHHHHHHHHHhhccccchhHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCChHHHHHHhccccc
Q 015346 42 IAHGCSFTQTIFNGINVMAGVGLLSTPYTVKEAGWASLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKYG 121 (408)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~Gil~LP~a~~~~G~~g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~~~ 121 (408)
.+|+.|.++.+...+++++|+|++.+|....+.|..+++.+++.++........+.+...+.|...+..+..++.+||+.
T Consensus 6 ~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~~~ 85 (445)
T 3l1l_A 6 DAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFL 85 (445)
T ss_dssp -CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCHHH
T ss_pred CCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCChH
Confidence 35679999999999999999999999988888887678888888888888999999998888888899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCCcccCchhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHHH
Q 015346 122 RLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGVVAT 201 (408)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~~~s~~~~~~~ 201 (408)
+++..+..++........+....++++..+++.... +-......+..++++-....++.+..++++.+.....
T Consensus 86 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~ 158 (445)
T 3l1l_A 86 GYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKD-------PWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLA 158 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGS-------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccc-------cHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 999999998888777777888888888776653210 0011112222223333344557777777776555544
Q ss_pred HHHHhhhheecccc-ccc-cCC---CCccccccchhhhHHHHhhhcccceehhhHHhhccchh-hHHHHHHHHHHHHHHH
Q 015346 202 ILIVLCVLFLGTIE-GIG-FHP---TGQVVKWSGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKALITCFALCVLI 275 (408)
Q Consensus 202 ~~~~~~~~~~~~~~-~~~-~~~---~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~~~~~~~~~~~~ 275 (408)
+...+.++..+... +.+ ... +....++.++..++....|+|.|++.+....+|+|||+ +.+|++..+..++.++
T Consensus 159 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~ 238 (445)
T 3l1l_A 159 LIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVC 238 (445)
T ss_dssp HHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHHHH
Confidence 43333222222111 111 101 11112355788899999999999999999999999996 7999999999999999
Q ss_pred HHHHHHHHHHHhcCCchhh-------hhcCCCCchHHHHHHHHHHHHhhhhhhhhhhhhhHHHH-----HhHcCCC----
Q 015346 276 YGGVAVMGFLMFGQGTLSQ-------ITLNMPPHAFASKVAVWTTVINPFTKYALLMNPLARSI-----EELLPAG---- 339 (408)
Q Consensus 276 Y~~~g~~gy~~fg~~~~~~-------il~~~~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~-----~~~~~~~---- 339 (408)
|++..+......+.+...+ +.+... .++...+..+...+..+.+.........+.. ++.+|+.
T Consensus 239 y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~~~~~ 317 (445)
T 3l1l_A 239 YVLSTTAIMGMIPNAALRVSASPFGDAARMAL-GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARV 317 (445)
T ss_dssp HHHHHHHHHHHSCTTTSCSTTCTHHHHHHHHH-CTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTSSCGGGGCC
T ss_pred HHHHHHHHHhcCCHHHHhccCcHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHhc
Confidence 9999888777766432111 111110 1122233333344444444333333333322 2334422
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHH--c----CchhHHHHHHhHHHHHHHHHHhhHHHHHHHhCCCC
Q 015346 340 ISNNYWCFILLRTALVFSSVCAAFL--L----PFFSLVMALIGSLLSILVAIIMPSLCFIKILGRKA 400 (408)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~la~~--~----p~~~~~~~l~Ga~~~~~~~~ilP~l~~~~~~~~~~ 400 (408)
++++...+-..- ..++..++.+. . ..++.+.++.+ .+..+.|.++++.+++.|++++
T Consensus 318 ~~~~~P~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~y~~~~~~~~~~r~~~~ 380 (445)
T 3l1l_A 318 NKAGTPVAGLII--VGILMTIFQLSSISPNATKEFGLVSSVSV--IFTLVPYLYTCAALLLLGHGHF 380 (445)
T ss_dssp CTTCCCHHHHHH--HHHHHHHHHHSTTSHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHSSSS
T ss_pred CCCCCCHHHHHH--HHHHHHHHHHHHHcccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCc
Confidence 111111111111 11112222222 1 24566666643 4677899999999999988776
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.76 E-value=2.1e-16 Score=153.97 Aligned_cols=342 Identities=15% Similarity=0.086 Sum_probs=207.8
Q ss_pred CCCCCCHHHHHHHHHHHhhccccchhH-HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCChHHHHHHhcccc
Q 015346 42 IAHGCSFTQTIFNGINVMAGVGLLSTP-YTVKEAGWASLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKY 120 (408)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~Gil~LP-~a~~~~G~~g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~~ 120 (408)
++|+.|.++.+...+++++|+|++.+| .+....|...++.+++.+++.......+.|...+.|......+.+++.+|++
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~~ 83 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDN 83 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCSS
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCcc
Confidence 356799999999999999999999987 4456667657777888888888888999999888888888889999999996
Q ss_pred --chhHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCCcccCchhH--HHHHHHHHHHhhhcccCCchhHHHHHH
Q 015346 121 --GRLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHL--FGILTALIVLPTIWLRDLRVISYLSAT 196 (408)
Q Consensus 121 --~~~~~~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~pl~~~~~l~~l~~~s~~ 196 (408)
+++ +.+..++........+....++++...++... ...+ ...+..++++-....++.+..++++.+
T Consensus 84 ~~~g~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~ 153 (444)
T 3gia_A 84 IITGA-LSILLWMSYVISIALFAKGFAGYFLPLINAPI---------NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFF 153 (444)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC---------CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---------chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 343 45666666667777788888888888765321 1111 112222233334445577777777765
Q ss_pred HHHHHHHHHhhhheecccc-cc-ccCCCCccccccchhhhHHHHhhhcccceehhhHHhhccchh-hHHHHHHHHHHHHH
Q 015346 197 GVVATILIVLCVLFLGTIE-GI-GFHPTGQVVKWSGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKALITCFALCV 273 (408)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~~~~~~~~~~ 273 (408)
.....+...+.++..+... +. ...+.....++.++..++....|+|.|++.+....+|+|||+ +.+|++..+..++.
T Consensus 154 ~~~~~i~~~~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~ 233 (444)
T 3gia_A 154 IVLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVM 233 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCGGGTSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcChhhcCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHH
Confidence 5544333333222222111 11 111112223345678888889999999999999999999997 59999999999999
Q ss_pred HHHHHHHHHHHHHhcCCchhhhhcCCC--------C--chHHHHHHHHHHHHhhhhhhhhhhhhhHHH-----HHhHcCC
Q 015346 274 LIYGGVAVMGFLMFGQGTLSQITLNMP--------P--HAFASKVAVWTTVINPFTKYALLMNPLARS-----IEELLPA 338 (408)
Q Consensus 274 ~~Y~~~g~~gy~~fg~~~~~~il~~~~--------~--~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~-----~~~~~~~ 338 (408)
++|++..+......+.+ ++..+-+ + +++...+..+...+..+.+..-.+...-+. -++.+|+
T Consensus 234 ~~y~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~dg~lP~ 310 (444)
T 3gia_A 234 FVYVGVAISAIGNLPID---ELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPE 310 (444)
T ss_dssp HHHHHHHHHHHTTSCHH---HHHHTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHSSCCS
T ss_pred HHHHHHHHHHHhCCCHH---HHhcccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Confidence 99998877665554422 1111000 0 011111222222233222222222222221 2445554
Q ss_pred C--CCcchhHHHHHHHHHHHHHHHHHHHcCchhHHHHHHhHHHHHHHHHHhhHHHHHHHhCCCC
Q 015346 339 G--ISNNYWCFILLRTALVFSSVCAAFLLPFFSLVMALIGSLLSILVAIIMPSLCFIKILGRKA 400 (408)
Q Consensus 339 ~--~~~~~~~~~~~~~~~~~~~~~la~~~p~~~~~~~l~Ga~~~~~~~~ilP~l~~~~~~~~~~ 400 (408)
. +.+++..... ..+...++.+++. ..+++.+.++. ..+..+.|.++++.+++.||+++
T Consensus 311 ~f~~~~~~~P~~a-~~~~~~~~~~~~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~r~~~~ 370 (444)
T 3gia_A 311 FFERKVWFKSTEG-LYITSALGVLFAL-LFNMEGVASIT--SAVFMVIYLFVILSHYILIDEVG 370 (444)
T ss_dssp SCCTTSCCSCTHH-HHHHHHHHHHHHH-HSCHHHHHHHH--HHHHHHHHHHHHHHHHHTHHHHC
T ss_pred HHhCCCCCCCcHH-HHHHHHHHHHHHH-HcCHHHHHHHH--HHHHHHHHHHHHHHHHHhhhcCC
Confidence 3 1111111111 1111112222333 34677777764 34778899999999998877654
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.62 E-value=2.2e-13 Score=135.06 Aligned_cols=242 Identities=11% Similarity=0.080 Sum_probs=149.3
Q ss_pred ccCCCCCCHHHHHHHHHHHhhccccchhHHHHHhhcHHHHHHHHHHHHHH-HHHHHHHHHhhh--hCCCCCChHHHHHHh
Q 015346 40 LPIAHGCSFTQTIFNGINVMAGVGLLSTPYTVKEAGWASLVVLLLFAVVC-CYTASLMRYCFE--SKEGITTYPDIGEAA 116 (408)
Q Consensus 40 ~~~~~~~s~~~~~~~l~~~~iG~Gil~LP~a~~~~G~~g~~~l~~~~~~~-~~~~~~l~~~~~--~~~~~~~y~~l~~~~ 116 (408)
++.+|+.|.++.+...++.++| +.++|. ....|...++..++.+++. ...+..+.|... +.| .......+++.
T Consensus 7 ~~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~GG~y~~~~~~ 82 (511)
T 4djk_A 7 TGKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWE-EGGVFAWVSNT 82 (511)
T ss_dssp -----CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC----CHHHHHHHH
T ss_pred CccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCC-CCChhhhHHhh
Confidence 3446779999999999999996 567775 4566655544444444443 346778888888 888 88999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCCcccCc-hhHHHHHHHHHHHhhhcccCCchhHHHHH
Q 015346 117 FGKYGRLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDS-THLFGILTALIVLPTIWLRDLRVISYLSA 195 (408)
Q Consensus 117 ~G~~~~~~~~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~pl~~~~~l~~l~~~s~ 195 (408)
+||+.+++..+..++........+....++.+...+.. ++...+. ..+...+..++++-+...++.+...+++.
T Consensus 83 ~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~ 157 (511)
T 4djk_A 83 LGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW-----PALNEDPITKTIAALIILWALALTQFGGTKYTARIAK 157 (511)
T ss_dssp HCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTC-----GGGTSCSSHHHHHHHHHHHHHHHHHHTCSSSHHHHTH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----cccccCcHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 99999999998888887776666766667766555311 1111011 11222222333333445567777777766
Q ss_pred HHHHH-HHHHHhhhheecc---ccccc----cCCCCcccc--ccchhhhHHHHhhhcccceehhhHHhhccchh-hHHHH
Q 015346 196 TGVVA-TILIVLCVLFLGT---IEGIG----FHPTGQVVK--WSGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKA 264 (408)
Q Consensus 196 ~~~~~-~~~~~~~~~~~~~---~~~~~----~~~~~~~~~--~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~ 264 (408)
+.... .+..++.++..+. ..+.+ .+......+ ..+...++...+|+|.|.+......+|+|||+ +.+|+
T Consensus 158 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~a 237 (511)
T 4djk_A 158 VGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLA 237 (511)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHTC------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcccchHHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHH
Confidence 54332 1111111111111 11110 111111111 12345677888999999999999999999997 69999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015346 265 LITCFALCVLIYGGVAVMGFLMFGQG 290 (408)
Q Consensus 265 ~~~~~~~~~~~Y~~~g~~gy~~fg~~ 290 (408)
+..+..++.++|++..+......+++
T Consensus 238 i~~~~~~~~~~y~~~~~~~~~~~~~~ 263 (511)
T 4djk_A 238 MLLLMVAAICLSSVGGLSIAMVIPGN 263 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHeecCHh
Confidence 99999999999999988776666543
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=99.02 E-value=2.1e-07 Score=91.37 Aligned_cols=328 Identities=10% Similarity=0.052 Sum_probs=174.5
Q ss_pred CCCCCHHHHHHHHHHHhhccccchhHHHHHh-hcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCChHHHHHHhcccc
Q 015346 43 AHGCSFTQTIFNGINVMAGVGLLSTPYTVKE-AGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKY 120 (408)
Q Consensus 43 ~~~~s~~~~~~~l~~~~iG~Gil~LP~a~~~-~G~~-g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~~ 120 (408)
+|+.++++.+..-.+..++.+-+.+...+.. .++. +++.+++..++....+........ +.+ .++.++.+..||++
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~-~~G-l~~~v~~R~~FG~~ 101 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAI-RWG-INFTVAARMPFGIR 101 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHH-HHC-CCHHHHTTTTSCTT
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHh-hcC-CChhhhhHhhcchh
Confidence 4557888888888888888888877766654 2244 555555444444433334433333 233 34999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCCcccCchhHHHHHHHHHHHhhhcccCCchhHHHHHHHHHH
Q 015346 121 GRLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGVVA 200 (408)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~~~s~~~~~~ 200 (408)
|..+..++..+..++-...-....++.+...+.... + .+......++..++.+++... ..+.++++..+....
T Consensus 102 Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~----g--~~~~~v~~~i~~~l~~~~~~~-G~~~i~~~~~~~~p~ 174 (501)
T 2jln_A 102 GSLIPITLKALLSLFWFGFQTWLGALALDEITRLLT----G--FTNLPLWIVIFGAIQVVTTFY-GITFIRWMNVFASPV 174 (501)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----C--CCCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----C--cchHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 999999988888888887777777888777653110 0 011234455556666666544 667777766665444
Q ss_pred HHHHHhhhheecc-cccc---ccCCCCccccccchhhhHHHH-hhhcccceehhhHHhhccchhh------------HHH
Q 015346 201 TILIVLCVLFLGT-IEGI---GFHPTGQVVKWSGMPFAIGIY-GFCYSGHSVFPNIYQSMADKTK------------FTK 263 (408)
Q Consensus 201 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~-~faf~~~~~i~~i~~~m~~p~~------------~~~ 263 (408)
..+..+.+.+... ..+. +....+.......+..++... .+.-....+.++..+.+|++++ ...
T Consensus 175 ~~i~~i~~~~~~l~~~g~~~~~~~~~~~~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~~~~~~~~~~~~~~~~~ 254 (501)
T 2jln_A 175 LLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYAT 254 (501)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCCCSSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcchhhhccCCccchHHHHHHHHHHHHHHHHHHhccCcccccCCCCccccccchhhccchHHH
Confidence 3333322222211 1111 000111111223444444432 2222334678899999988776 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhcC-CCCchHHHHHHH-HHHHHhhhhhhhh-hhhhhHHHHHhHcCCCC
Q 015346 264 ALITCFALCVLIYGGVAVMGFLMFGQGTLSQITLN-MPPHAFASKVAV-WTTVINPFTKYAL-LMNPLARSIEELLPAGI 340 (408)
Q Consensus 264 ~~~~~~~~~~~~Y~~~g~~gy~~fg~~~~~~il~~-~~~~~~~~~v~~-~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~ 340 (408)
....+..+...+..++|...-...+......++.. ++.......++. +...+..+.+--. ..++.-..+....++.
T Consensus 255 g~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~~l~~~~~~~~~~~~~~~~la~i~tn~~~n~ys~~~~l~~~~~~~- 333 (501)
T 2jln_A 255 AQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRV- 333 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTTHHHHHTHHHHHHHHHHSTTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCccc-
Confidence 44455556665666666544333333333334333 221112133344 4444555444443 6777777777776542
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHc--CchhHHHHHHhHHHHHHHH
Q 015346 341 SNNYWCFILLRTALVFSSVCAAFLL--PFFSLVMALIGSLLSILVA 384 (408)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~la~~~--p~~~~~~~l~Ga~~~~~~~ 384 (408)
.++++.. .+..++.++++... ..+..++++.|...+...+
T Consensus 334 -i~~~~~~---~i~~vi~~~i~~~~~~~~f~~FL~~lg~~l~P~~g 375 (501)
T 2jln_A 334 -FTFKTGV---IVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAG 375 (501)
T ss_dssp -CCHHHHH---HHHHHHHHHTCGGGTHHHHHHHHHHHHHTTHHHHH
T ss_pred -cchhHHH---HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 1222111 12222333333332 2455666666665544444
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=98.45 E-value=0.00019 Score=70.81 Aligned_cols=150 Identities=15% Similarity=0.114 Sum_probs=86.8
Q ss_pred cCCCCCCHHHHHHHHHHHhhcccc-chhHHHHHhhcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCChHHHHHHhcc
Q 015346 41 PIAHGCSFTQTIFNGINVMAGVGL-LSTPYTVKEAGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFG 118 (408)
Q Consensus 41 ~~~~~~s~~~~~~~l~~~~iG~Gi-l~LP~a~~~~G~~-g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G 118 (408)
-..|+.+++...+.+..+.+++.. +++|-.....|+. ....+.. ++........+....+ +.+..|..|..++-||
T Consensus 17 laGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~~-~~~~~i~~~~~~p~~~-~~~~~T~~e~l~~Rfg 94 (530)
T 3dh4_A 17 XAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFI-EKGIYTIPEFVEKRFN 94 (530)
T ss_dssp CCCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHHH-HHHHHHHHHHTHHHHH-HTTCCSHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH-HHHHHHHHHHHHHHHH-HcCCccHHHHHHHHcC
Confidence 346779999999999999998854 7799888888865 3221111 1111122222233323 5678999999999999
Q ss_pred ccchhHHHHHHHH-HHHHHHHHHHHHhhhhhhhccCCCCCCCCCcccCchhHHHHHHHHHHHhhhcccCCchhHHHHHHH
Q 015346 119 KYGRLLISVLLYT-ELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATG 197 (408)
Q Consensus 119 ~~~~~~~~~~~~~-~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~~~s~~~ 197 (408)
++.+.+..+...+ +.+..+..-+...+..++.+++- +.....++..++....+....++...+...+-
T Consensus 95 ~~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~Gi-----------~~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~iQ 163 (530)
T 3dh4_A 95 KKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGI-----------PLMYSILGLALFALVYSIYGGLSAVVWTDVIQ 163 (530)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-----------CHHHHHHHHHHHHHHTTC------CCSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------CHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 9888776665433 22233333333345555555431 13344555566666677788888888877766
Q ss_pred HHHHHH
Q 015346 198 VVATIL 203 (408)
Q Consensus 198 ~~~~~~ 203 (408)
.+..+.
T Consensus 164 ~~im~~ 169 (530)
T 3dh4_A 164 VFFLVL 169 (530)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.86 E-value=0.023 Score=56.77 Aligned_cols=148 Identities=14% Similarity=0.104 Sum_probs=83.0
Q ss_pred CCCCCCHHHHHHHHHHHhhcccc-chhHHHHHhhcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCChHHHHHHhccc
Q 015346 42 IAHGCSFTQTIFNGINVMAGVGL-LSTPYTVKEAGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGK 119 (408)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~Gi-l~LP~a~~~~G~~-g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~ 119 (408)
..|+.+++.....+..+.+++.- ++.|-...+.|+. ....+.. ++........+..-.+ +.+..|..|..++-||+
T Consensus 47 aGR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~~-~~~~~~~~~~~~p~~~-r~~~~T~~e~l~~Rfg~ 124 (593)
T 2xq2_A 47 AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFI-EKGIYTIPEFVEKRFNK 124 (593)
T ss_dssp ----CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHHH-HHHHHHHHHTHHHHHH-HTTCCSHHHHHHHHTCH
T ss_pred CCCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHHH-HHHHHHHHHHHHHHHH-hCCCCCcHHHHHHHccC
Confidence 35778999999999888888755 6788777777864 2221111 1111111222222223 46789999999999999
Q ss_pred cchhHHHHHHHH-HHHHHHHHHHHHhhhhhhhccCCCCCCCCCcccCchhHHHHHHHHHHHhhhcccCCchhHHHHHHHH
Q 015346 120 YGRLLISVLLYT-ELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGV 198 (408)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~~~s~~~~ 198 (408)
+.+.+..+...+ +.+.....-+...+..++.+++- +.....++..+++...+....++...+...+-.
T Consensus 125 ~~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~Gi-----------~~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ~ 193 (593)
T 2xq2_A 125 KLKTILAVFWISLYIFVNLTSVLYLGGLALETILGI-----------PLMYSILGLALFALVYSIYGGLSAVVWTDVIQV 193 (593)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHHTTC---CCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-----------cHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 887766654332 23333333333445555555431 123344455566666777788888877776665
Q ss_pred HHHH
Q 015346 199 VATI 202 (408)
Q Consensus 199 ~~~~ 202 (408)
+..+
T Consensus 194 iiml 197 (593)
T 2xq2_A 194 FFLV 197 (593)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=97.79 E-value=0.024 Score=55.12 Aligned_cols=221 Identities=14% Similarity=0.082 Sum_probs=115.3
Q ss_pred CCHHHHHHHHHHHhhccc-cchhHHHHHhhcHH-----HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCChHHHHHHhccc
Q 015346 46 CSFTQTIFNGINVMAGVG-LLSTPYTVKEAGWA-----SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGK 119 (408)
Q Consensus 46 ~s~~~~~~~l~~~~iG~G-il~LP~a~~~~G~~-----g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~ 119 (408)
.|..+-++..+++.+|-| +.=.||-..+-|-. -++.+++.++-..+.=..+.|-.. +..+.+-.+..++...+
T Consensus 9 ~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~-~~~r~~~i~a~~~l~~~ 87 (519)
T 2a65_A 9 ATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGG-AQGHGTTPAIFYLLWRN 87 (519)
T ss_dssp SCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTTCCSHHHHHHHHSCS
T ss_pred CcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccch-hccCCCHHHHHHHhcCC
Confidence 688999999999999998 56799988776632 344444445545444445555322 12222333333344333
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCCCCC-cc----------------------------cC---ch
Q 015346 120 YGRLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPG-FQ----------------------------LD---ST 167 (408)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~-~~----------------------------~~---~~ 167 (408)
+....+.+...+..+...+.|.+..+-.+..+...+..+.+. |. .. .+
T Consensus 88 ~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~g~~~~~ 167 (519)
T 2a65_A 88 RFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGDEPILKPSLF 167 (519)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CCHHHHHHHHHHHHHHHHTCCSSSSCBCCCCHH
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcccccCcHHHHHHHHHCCCCCcccccCccHH
Confidence 111234444555555566666666655554333211111000 00 00 01
Q ss_pred hHHHHHHHHHHHhhhcccCC-chhHHHHHHHHHHHHHHHhhhheecc-cccc--------ccCCCCccc---cccchhhh
Q 015346 168 HLFGILTALIVLPTIWLRDL-RVISYLSATGVVATILIVLCVLFLGT-IEGI--------GFHPTGQVV---KWSGMPFA 234 (408)
Q Consensus 168 ~~~~~i~~~~~~pl~~~~~l-~~l~~~s~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~---~~~~~~~~ 234 (408)
.....+...++.-++..+.. +...+.+.+-.....+..+++++... .+++ ..-..++.. +..-...+
T Consensus 168 ~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~L~~~~vw~~A 247 (519)
T 2a65_A 168 AYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAA 247 (519)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHHhCCHHHHHHH
Confidence 11122333334445677788 66888887766655554444444332 2221 111122222 22346789
Q ss_pred HHHHhhhcc-cceehhhHHhhccchhhHHHHHHH
Q 015346 235 IGIYGFCYS-GHSVFPNIYQSMADKTKFTKALIT 267 (408)
Q Consensus 235 ~~~~~faf~-~~~~i~~i~~~m~~p~~~~~~~~~ 267 (408)
.+..+|+.+ |...+......+++.++..+....
T Consensus 248 ~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~~ 281 (519)
T 2a65_A 248 VGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLT 281 (519)
T ss_dssp HHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHHH
T ss_pred HHHHHHHhHHHHhHHhhhhcccCCCcChHhhHHH
Confidence 999999998 555666666666666666654433
No 8
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=64.57 E-value=1.1e+02 Score=29.70 Aligned_cols=24 Identities=21% Similarity=0.091 Sum_probs=19.7
Q ss_pred CCCCCHHHHHHHHHHHhhccccch
Q 015346 43 AHGCSFTQTIFNGINVMAGVGLLS 66 (408)
Q Consensus 43 ~~~~s~~~~~~~l~~~~iG~Gil~ 66 (408)
++.-|.++-+.++..+-+|.|++.
T Consensus 93 kPefS~~sW~aMlF~AGmGiGl~F 116 (539)
T 4ain_A 93 APEFRTVSWISMMFAAGMGIGLMF 116 (539)
T ss_dssp CCSSCHHHHHHHHHTTSCCTHHHH
T ss_pred CCCCcchHHHHHHHHHhhcchhee
Confidence 344788888899999999999873
No 9
>4b4a_A TATC, SEC-independent protein translocase protein TATC; transport protein, TAT secretion system, protein translocati; HET: LMN; 3.50A {Aquifex aeolicus}
Probab=51.39 E-value=96 Score=26.61 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=32.2
Q ss_pred chHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhHcCCCCCcchhHHHHHHHHHHHHHHHHHHHcC
Q 015346 302 HAFASKVAVWTTVINPFTKYALLMNPLARSIEELLPAGISNNYWCFILLRTALVFSSVCAAFLLP 366 (408)
Q Consensus 302 ~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~p 366 (408)
+++...+.++.....+..-.|+.+.-+.+ .+.++ .+..+-.-|.+++....+.|...|
T Consensus 147 ~~Yl~fv~~l~l~fGl~FelPvi~~~L~~--~Giv~-----~~~l~~~Rr~~iv~~~v~aAiiTP 204 (249)
T 4b4a_A 147 DMYISFVLKLVVAFGIAFEMPIVLYVLQK--AGVIT-----PEQLASFRKYFIVIAFVIGAIIAP 204 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHHHHH--TTSSC-----HHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcC-----HHHHHHHhHHHHHHHHHHHHHHCC
Confidence 45666777777777777777766543222 22322 222222235556666666777788
No 10
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=34.00 E-value=70 Score=19.20 Aligned_cols=10 Identities=30% Similarity=0.564 Sum_probs=4.2
Q ss_pred HHHHHhHHHH
Q 015346 371 VMALIGSLLS 380 (408)
Q Consensus 371 ~~~l~Ga~~~ 380 (408)
..+.+|++..
T Consensus 13 A~gVVgGv~~ 22 (44)
T 2l2t_A 13 AAGVIGGLFI 22 (44)
T ss_dssp HHHHHHHHHH
T ss_pred EEeehHHHHH
Confidence 3444444433
No 11
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=31.02 E-value=3.6e+02 Score=25.79 Aligned_cols=25 Identities=16% Similarity=-0.005 Sum_probs=20.2
Q ss_pred CCCCCHHHHHHHHHHHhhccccchh
Q 015346 43 AHGCSFTQTIFNGINVMAGVGLLST 67 (408)
Q Consensus 43 ~~~~s~~~~~~~l~~~~iG~Gil~L 67 (408)
++.-|.++-+..+..+-+|.|++.-
T Consensus 88 kPefs~~sW~aMlF~aGmGiGl~fw 112 (509)
T 2wsw_A 88 KPEFSTASWIFMMFASCTSAAVLFW 112 (509)
T ss_dssp CCSSCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCccchHHHHHHHHhhhhHHhhh
Confidence 3447888889999999999998753
No 12
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=30.08 E-value=58 Score=19.55 Aligned_cols=7 Identities=14% Similarity=0.586 Sum_probs=2.8
Q ss_pred HHhHHHH
Q 015346 374 LIGSLLS 380 (408)
Q Consensus 374 l~Ga~~~ 380 (408)
++|++.+
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3333434
No 13
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=21.51 E-value=1.4e+02 Score=17.85 Aligned_cols=11 Identities=27% Similarity=0.676 Sum_probs=4.9
Q ss_pred HHHHHhHHHHH
Q 015346 371 VMALIGSLLSI 381 (408)
Q Consensus 371 ~~~l~Ga~~~~ 381 (408)
..+.+|++...
T Consensus 14 A~gVVgGv~~~ 24 (44)
T 2ks1_B 14 ATGMVGALLLL 24 (44)
T ss_dssp THHHHHHHHHH
T ss_pred EeehhHHHHHH
Confidence 34445544333
Done!