Query 015347
Match_columns 408
No_of_seqs 123 out of 1048
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 11:01:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015347.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015347hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tov_A Glycosyl transferase fa 100.0 2.1E-47 7.2E-52 381.6 29.3 265 121-408 7-279 (349)
2 2gt1_A Lipopolysaccharide hept 100.0 7.2E-43 2.5E-47 343.1 23.3 258 123-408 1-271 (326)
3 1psw_A ADP-heptose LPS heptosy 100.0 6.9E-41 2.3E-45 330.5 26.8 266 123-408 1-279 (348)
4 3otg_A CALG1; calicheamicin, T 97.7 0.001 3.6E-08 65.4 17.2 105 120-229 18-156 (412)
5 3dzc_A UDP-N-acetylglucosamine 97.7 0.00098 3.4E-08 66.6 16.9 105 120-227 23-138 (396)
6 3ot5_A UDP-N-acetylglucosamine 97.2 0.00053 1.8E-08 68.9 7.3 117 108-227 10-141 (403)
7 4fzr_A SSFS6; structural genom 97.1 0.014 4.8E-07 57.3 16.3 103 120-227 13-147 (398)
8 3okp_A GDP-mannose-dependent a 97.0 0.09 3.1E-06 50.5 21.4 248 121-397 3-279 (394)
9 1vgv_A UDP-N-acetylglucosamine 96.9 0.028 9.7E-07 54.3 16.5 103 123-227 1-113 (384)
10 1f0k_A MURG, UDP-N-acetylgluco 96.9 0.07 2.4E-06 51.1 18.9 104 123-230 7-125 (364)
11 4hwg_A UDP-N-acetylglucosamine 96.8 0.0051 1.8E-07 61.4 10.7 96 127-232 13-123 (385)
12 1v4v_A UDP-N-acetylglucosamine 95.9 0.61 2.1E-05 44.7 19.0 103 122-227 5-118 (376)
13 3s2u_A UDP-N-acetylglucosamine 95.4 0.42 1.4E-05 46.7 16.1 103 123-229 3-120 (365)
14 2gek_A Phosphatidylinositol ma 95.2 0.86 3E-05 43.8 17.4 108 119-229 17-135 (406)
15 3fro_A GLGA glycogen synthase; 95.0 2.8 9.5E-05 40.4 22.7 85 300-397 241-337 (439)
16 3c48_A Predicted glycosyltrans 94.7 1.1 3.9E-05 43.6 17.1 85 302-398 234-333 (438)
17 3rsc_A CALG2; TDP, enediyne, s 94.7 0.31 1E-05 47.7 12.7 105 120-228 18-144 (415)
18 3ia7_A CALG4; glycosysltransfe 94.4 0.3 1E-05 47.2 11.8 105 122-231 4-130 (402)
19 3h4t_A Glycosyltransferase GTF 94.4 1 3.5E-05 44.2 15.9 102 123-228 1-120 (404)
20 2iyf_A OLED, oleandomycin glyc 94.4 0.47 1.6E-05 46.6 13.3 103 122-229 7-130 (430)
21 3tsa_A SPNG, NDP-rhamnosyltran 94.2 0.24 8.2E-06 48.0 10.5 100 123-227 2-138 (391)
22 3oy2_A Glycosyltransferase B73 94.1 0.34 1.2E-05 47.2 11.5 99 123-226 1-105 (413)
23 3oti_A CALG3; calicheamicin, T 93.8 0.34 1.2E-05 47.3 10.9 103 120-228 18-155 (398)
24 2iuy_A Avigt4, glycosyltransfe 93.2 4.4 0.00015 38.0 17.4 76 122-212 3-94 (342)
25 2yjn_A ERYCIII, glycosyltransf 93.1 0.49 1.7E-05 47.0 10.9 108 116-228 14-169 (441)
26 3beo_A UDP-N-acetylglucosamine 93.0 6.2 0.00021 37.3 22.3 103 122-228 8-123 (375)
27 2iya_A OLEI, oleandomycin glyc 92.3 1.8 6E-05 42.5 13.5 104 122-231 12-136 (424)
28 2p6p_A Glycosyl transferase; X 92.2 1.8 6E-05 41.7 13.2 100 123-227 1-131 (384)
29 4amg_A Snogd; transferase, pol 92.1 1.4 4.7E-05 42.6 12.3 102 121-228 21-153 (400)
30 2jjm_A Glycosyl transferase, g 91.4 8.5 0.00029 36.8 17.2 83 303-397 203-291 (394)
31 2iw1_A Lipopolysaccharide core 91.2 4.5 0.00015 38.1 14.7 81 123-210 1-88 (374)
32 1rrv_A Glycosyltransferase GTF 89.6 1.4 4.9E-05 43.1 9.9 102 123-228 1-122 (416)
33 3hbm_A UDP-sugar hydrolase; PS 89.5 0.88 3E-05 43.3 7.9 84 123-222 1-88 (282)
34 1iir_A Glycosyltransferase GTF 87.8 3.6 0.00012 40.3 11.4 101 123-228 1-121 (415)
35 2bfw_A GLGA glycogen synthase; 81.1 11 0.00037 32.2 10.2 85 301-398 27-123 (200)
36 2ejb_A Probable aromatic acid 71.6 4.3 0.00015 36.2 4.9 44 123-169 2-45 (189)
37 2pq6_A UDP-glucuronosyl/UDP-gl 60.9 95 0.0033 30.9 13.0 105 122-231 8-145 (482)
38 3qhp_A Type 1 capsular polysac 60.4 24 0.00083 28.9 7.2 60 338-397 17-81 (166)
39 3auf_A Glycinamide ribonucleot 53.5 44 0.0015 30.4 8.2 98 119-221 19-121 (229)
40 2de0_X Alpha-(1,6)-fucosyltran 53.0 1.1E+02 0.0038 31.4 12.0 106 293-406 279-414 (526)
41 3av3_A Phosphoribosylglycinami 47.5 74 0.0025 28.5 8.6 95 122-221 3-102 (212)
42 1mvl_A PPC decarboxylase athal 43.5 22 0.00077 32.1 4.4 46 120-169 17-62 (209)
43 1g63_A Epidermin modifying enz 43.2 14 0.00048 32.6 2.9 45 122-169 2-46 (181)
44 3l0o_A Transcription terminati 43.0 94 0.0032 31.1 9.1 98 122-221 175-279 (427)
45 1qzu_A Hypothetical protein MD 41.9 20 0.00067 32.3 3.8 48 121-170 18-65 (206)
46 2hhc_A NODZ, nodulation fucosy 41.6 1.7E+02 0.006 27.3 10.8 31 122-152 4-34 (330)
47 2xci_A KDO-transferase, 3-deox 40.8 74 0.0025 30.5 8.1 89 123-224 41-132 (374)
48 2x6q_A Trehalose-synthase TRET 40.4 73 0.0025 30.3 7.9 44 121-166 39-84 (416)
49 1sbz_A Probable aromatic acid 39.9 23 0.0008 31.6 3.9 44 123-168 1-44 (197)
50 2fyi_A HTH-type transcriptiona 39.9 48 0.0016 28.4 6.0 49 129-179 20-70 (228)
51 3qvl_A Putative hydantoin race 39.3 23 0.0008 32.5 4.0 95 123-231 2-97 (245)
52 3hhf_B Transcriptional regulat 38.4 53 0.0018 27.3 5.9 48 130-180 14-61 (213)
53 3qjg_A Epidermin biosynthesis 37.5 29 0.00099 30.4 4.1 43 123-168 6-48 (175)
54 2f9f_A First mannosyl transfer 37.3 70 0.0024 26.6 6.5 58 338-396 38-103 (177)
55 3vue_A GBSS-I, granule-bound s 36.9 28 0.00097 35.6 4.5 36 121-160 8-51 (536)
56 3mcu_A Dipicolinate synthase, 36.8 30 0.001 31.2 4.2 44 122-168 5-49 (207)
57 2o6l_A UDP-glucuronosyltransfe 36.7 1.2E+02 0.0042 24.8 7.9 71 310-398 21-94 (170)
58 3zqu_A Probable aromatic acid 36.3 38 0.0013 30.6 4.7 45 122-169 4-48 (209)
59 2r60_A Glycosyl transferase, g 36.0 1.5E+02 0.0051 29.0 9.7 105 122-229 7-148 (499)
60 2qsx_A Putative transcriptiona 34.8 53 0.0018 28.1 5.4 55 123-180 19-73 (218)
61 3kos_A HTH-type transcriptiona 33.5 69 0.0024 26.8 5.9 54 124-180 13-66 (219)
62 4dim_A Phosphoribosylglycinami 33.2 1.5E+02 0.0052 28.2 9.0 72 121-209 6-78 (403)
63 3mz1_A Putative transcriptiona 33.1 1E+02 0.0035 27.1 7.2 54 125-181 90-143 (300)
64 3ice_A Transcription terminati 31.9 1.9E+02 0.0064 28.9 9.3 96 122-219 174-276 (422)
65 2acv_A Triterpene UDP-glucosyl 31.7 32 0.0011 34.4 3.8 108 122-231 9-142 (463)
66 2c1x_A UDP-glucose flavonoid 3 31.3 3.5E+02 0.012 26.6 11.5 41 122-162 7-47 (456)
67 2vch_A Hydroquinone glucosyltr 30.5 70 0.0024 32.0 6.1 104 121-227 5-134 (480)
68 3r6w_A FMN-dependent NADH-azor 30.3 51 0.0017 28.9 4.6 38 122-159 1-42 (212)
69 3abi_A Putative uncharacterize 29.8 1.4E+02 0.0047 28.5 8.0 78 116-212 10-87 (365)
70 3lqk_A Dipicolinate synthase s 29.7 40 0.0014 30.1 3.7 46 122-169 7-52 (201)
71 2jfq_A Glutamate racemase; cel 28.8 73 0.0025 29.8 5.6 72 123-212 23-94 (286)
72 1p3y_1 MRSD protein; flavoprot 28.8 27 0.00094 31.0 2.4 43 122-167 8-50 (194)
73 1rzu_A Glycogen synthase 1; gl 28.7 1.7E+02 0.0058 28.4 8.6 85 301-397 280-372 (485)
74 1ofu_X SULA, hypothetical prot 28.1 1.9E+02 0.0064 23.4 7.3 80 127-209 8-90 (119)
75 1oft_A SULA, hypothetical prot 27.0 2.6E+02 0.0087 24.0 8.3 80 127-209 50-132 (161)
76 3sxp_A ADP-L-glycero-D-mannohe 26.8 3E+02 0.01 25.5 9.7 77 121-211 9-99 (362)
77 2pn1_A Carbamoylphosphate synt 25.8 2.9E+02 0.0099 25.3 9.3 76 122-209 4-79 (331)
78 2qzs_A Glycogen synthase; glyc 25.8 1.7E+02 0.0058 28.4 7.9 85 301-397 280-373 (485)
79 3gbv_A Putative LACI-family tr 25.4 2.5E+02 0.0087 24.8 8.6 36 123-158 136-177 (304)
80 2npb_A Selenoprotein W; struct 25.2 32 0.0011 27.1 2.0 54 137-192 17-73 (96)
81 2p6p_A Glycosyl transferase; X 24.9 1.3E+02 0.0045 28.1 6.8 75 310-399 210-288 (384)
82 2x6q_A Trehalose-synthase TRET 24.1 16 0.00054 35.1 -0.1 86 301-398 221-323 (416)
83 3ho7_A OXYR; beta-alpha-barrel 23.4 1.2E+02 0.0041 25.4 5.7 36 124-160 12-47 (232)
84 3ia7_A CALG4; glycosysltransfe 23.3 1E+02 0.0035 28.9 5.6 74 309-399 230-306 (402)
85 3hhg_A Transcriptional regulat 22.8 1.7E+02 0.0059 25.9 6.8 54 124-180 94-147 (306)
86 2h6e_A ADH-4, D-arabinose 1-de 22.7 1.6E+02 0.0055 27.6 6.8 77 121-212 170-248 (344)
87 2ywr_A Phosphoribosylglycinami 22.2 1.8E+02 0.0062 25.8 6.7 84 123-211 2-89 (216)
88 3u7i_A FMN-dependent NADH-azor 22.1 1.4E+02 0.0047 26.7 5.9 40 120-159 2-48 (223)
89 3cea_A MYO-inositol 2-dehydrog 21.9 4.4E+02 0.015 24.3 9.8 74 120-212 6-81 (346)
90 3p0r_A Azoreductase; structura 21.6 1.3E+02 0.0045 26.3 5.6 38 122-159 4-46 (211)
91 2jli_A YSCU, YOP proteins tran 21.2 34 0.0012 28.3 1.4 22 383-407 29-51 (123)
92 3oxn_A Putative transcriptiona 21.2 1.6E+02 0.0056 24.9 6.1 55 124-180 20-76 (241)
93 2lyx_A Uncharacterized protein 20.8 48 0.0016 25.8 2.1 15 142-156 19-33 (87)
94 2vsy_A XCC0866; transferase, g 20.7 5.2E+02 0.018 25.4 10.6 89 113-211 196-291 (568)
95 2oho_A Glutamate racemase; iso 20.7 2.1E+02 0.0071 26.2 7.0 71 123-212 13-84 (273)
96 3oti_A CALG3; calicheamicin, T 20.3 47 0.0016 31.7 2.5 76 309-399 231-308 (398)
97 3gqv_A Enoyl reductase; medium 20.1 5.4E+02 0.019 24.1 11.5 78 120-212 163-241 (371)
98 2ql3_A Probable transcriptiona 20.0 96 0.0033 25.7 4.2 48 130-179 12-61 (209)
No 1
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=100.00 E-value=2.1e-47 Score=381.57 Aligned_cols=265 Identities=15% Similarity=0.120 Sum_probs=227.0
Q ss_pred CccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHhhc
Q 015347 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMKN 200 (408)
Q Consensus 121 ~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR~ 200 (408)
..||||||+.++|||+|+++|++++||++||+++|+|++.+.++++++++|+||+|+.+|++....++..+++++++||+
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~~~~~~~~~~~~l~~~Lr~ 86 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKKGRHNSISGLNEVAREINA 86 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcccccccHHHHHHHHHHHhh
Confidence 46999999999999999999999999999999999999999999999999999999999976432346677899999999
Q ss_pred CCC-cEEEEcCCCChHHHHHHHHhCCCeEEEecCCCcccccccccceeeeccCcCCcchhHHHHHHHHHHHcCCCCCCCC
Q 015347 201 RYY-DMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLSETFTAESMNLSERGYNMYEQMVDWLGRPFRSVP 279 (408)
Q Consensus 201 ~~Y-DlvIdl~~~~~~sall~~laga~~RIG~~~~~~~~~~~~~~lt~~v~~~~~~~~~h~~~~y~~lL~~LGi~~~~~p 279 (408)
++| |++||++++ .+++++++++|++.|+||. ..+..+++++.+..... ..|.+++|+++++.+|++.
T Consensus 87 ~~y~D~vidl~~~-~rs~~l~~~~~a~~riG~~-----~~~~~~~~~~~~~~~~~--~~h~v~r~~~ll~~lg~~~---- 154 (349)
T 3tov_A 87 KGKTDIVINLHPN-ERTSYLAWKIHAPITTGMS-----HFLFRPFMTKYTRLDRK--TRHAADMYINVLEQLGVTD---- 154 (349)
T ss_dssp HCCCCEEEECCCS-HHHHHHHHHHCCSEEEECC-----CTTTGGGCSEECCCCTT--TSCHHHHHHHHHHHTTCCC----
T ss_pred CCCCeEEEECCCC-hHHHHHHHHhCCCeEEecC-----CCCccccccccccCCCC--CccHHHHHHHHHHHhCCCc----
Confidence 999 999999999 8999999999999999998 44555788887764322 2689999999999999841
Q ss_pred CCCCCCCccccCHHHHHHHHHHHHhhCCC-CCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC-CEEEe
Q 015347 280 RHPVPPLRVSISRRLKEVVAEKYKNAGAE-QGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVI 357 (408)
Q Consensus 280 ~~~~p~~~i~is~~~~~~a~~~l~~~g~~-~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~-~vvli 357 (408)
.....+.+.+++++++.+++++.+.|+. ++++|+||||+++.. |+||.|+|++|++.|.+++ +++++
T Consensus 155 -~~~~~~~l~~~~~~~~~~~~~l~~~g~~~~~~~i~i~pga~~~~----------k~wp~~~~~~l~~~l~~~g~~vvl~ 223 (349)
T 3tov_A 155 -TSNSGLHIEICEEWRCQAQEFYSSHGLTDTDILIGFNIGSAVPE----------KRWPAERFAHVADYFGRLGYKTVFF 223 (349)
T ss_dssp -CCCCCCCCCCCHHHHHHHHHHHHHTTCCTTCCEEEEECCCSSGG----------GCCCHHHHHHHHHHHHHHTCEEEEC
T ss_pred -cCCCceeeeCCHHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCcc----------CCCCHHHHHHHHHHHHhCCCeEEEE
Confidence 1223456778888888888888888876 468999999998865 8899999999999998776 78899
Q ss_pred CCcchHHHHHHHHhcCCC-c---cccCCHHHHHH-hcccCEEEeCCChHHHHhcCC
Q 015347 358 PHEKEREGVEDVVGDDAS-I---VFITTPGQLQI-QQPYNLQTRVKSPALHCSALS 408 (408)
Q Consensus 358 ggp~E~e~~~~I~~~~~~-~---~~i~~~~eLaA-i~~adl~I~nDSGpmHLAaa~ 408 (408)
|+++|++.+++|.+.... . ...+++.|+++ |++||++||||||+||||+|.
T Consensus 224 g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~~i~~DsG~~HlAaa~ 279 (349)
T 3tov_A 224 GGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNLLITNDSGPMHVGISQ 279 (349)
T ss_dssp CCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSEEEEESSHHHHHHHTT
T ss_pred eCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCEEEECCCCHHHHHHhc
Confidence 999999999999875532 1 12356799999 999999999999999999874
No 2
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=100.00 E-value=7.2e-43 Score=343.06 Aligned_cols=258 Identities=14% Similarity=0.123 Sum_probs=204.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCC---CCC---ChHHHHHHHH
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD---DWP---EPAEYTDILG 196 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~---~~~---~~~~~~~l~~ 196 (408)
||||||++++|||+|+++|++++||++||+++|+|++.+.++++++++|+||+|+.++.+. .+. ....+.++++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFRE 80 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTSTTEEEEEEECHHHHHTTTTSHHHHHHHHHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcCCCCCEEEEccHHHhhhccchHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999999998531 111 1235678889
Q ss_pred HhhcCCCcEEEEcCCCChHHH-HHHHHhCCCeEEEecCCCcccccccccceeeeccCcCCcchhHHHHHHHHH-HHcCCC
Q 015347 197 VMKNRYYDMVLSTKLAGLGHA-AFLFMTTARDRVSYIYPNVNAAGAGLLLSETFTAESMNLSERGYNMYEQMV-DWLGRP 274 (408)
Q Consensus 197 ~LR~~~YDlvIdl~~~~~~sa-ll~~laga~~RIG~~~~~~~~~~~~~~lt~~v~~~~~~~~~h~~~~y~~lL-~~LGi~ 274 (408)
+||+++||++||++++ .+++ ++++++| +.|+||..+........+++++.+..... .|.+++|++++ +.+|++
T Consensus 81 ~lr~~~~D~vidl~~~-~~s~~~~~~l~~-~~~ig~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~~~~~ll~~~lg~~ 155 (326)
T 2gt1_A 81 ALQAKNYDAVIDAQGL-VKSAALVTRLAH-GVKHGMDWQTAREPLASLFYNRKHHIAKQ---QHAVERTRELFAKSLGYS 155 (326)
T ss_dssp HHHHSBCSEEEECSCC-HHHHHHTGGGSB-SCEEEECTTTSSSGGGGGGCSEEECCCSS---SCHHHHHHHHHHHHHTCC
T ss_pred HHhccCCCEEEECCcc-HHHHHHHHHHcC-CcEEccCcCcccchhHHhhhccccCCCcC---cCHHHHHHHHHHHHcCCC
Confidence 9999999999999998 8999 8899999 89999985433222345678887765443 68899999988 689984
Q ss_pred CCCCCCCCCCCCccccCHHHHHHHHHHHHhhCCCCCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC-C
Q 015347 275 FRSVPRHPVPPLRVSISRRLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-P 353 (408)
Q Consensus 275 ~~~~p~~~~p~~~i~is~~~~~~a~~~l~~~g~~~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~-~ 353 (408)
.. ...+.+.++++ .+.+.+...+++|+||||+++.. |+||.|+|++|++.|.+++ +
T Consensus 156 ~~------~~~~~~~~~~~-------~~~~~~~~~~~~i~l~pga~~~~----------k~wp~~~~~~l~~~L~~~~~~ 212 (326)
T 2gt1_A 156 KP------QTQGDYAIAQH-------FLTNLPTDAGEYAVFLHATTRDD----------KHWPEEHWRELIGLLADSGIR 212 (326)
T ss_dssp CC------SSCCCCCCHHH-------HHTTCCTTTTSEEEEECCCSSGG----------GSCCHHHHHHHHHHTTTTCCE
T ss_pred CC------CCCcccccCch-------hhhhccccCCCEEEEEeCCCCcc----------ccCCHHHHHHHHHHHHHCCCc
Confidence 22 11122333222 12233444568999999998864 8899999999999998766 6
Q ss_pred EEEe-CCcchHHHHHHHHhcCCCcc--ccCCHHHHHH-hcccCEEEeCCChHHHHhcCC
Q 015347 354 LFVI-PHEKEREGVEDVVGDDASIV--FITTPGQLQI-QQPYNLQTRVKSPALHCSALS 408 (408)
Q Consensus 354 vvli-ggp~E~e~~~~I~~~~~~~~--~i~~~~eLaA-i~~adl~I~nDSGpmHLAaa~ 408 (408)
++++ |+++|++.+++|.+.+++.. ..+++.|+++ |++||++||||||+||||+|.
T Consensus 213 vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l~I~~DSG~~HlAaa~ 271 (326)
T 2gt1_A 213 IKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAAL 271 (326)
T ss_dssp EEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSEEEEESSHHHHHHHHT
T ss_pred EEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCEEEecCCcHHHHHHHc
Confidence 7776 77889999999987654432 2456799999 999999999999999999873
No 3
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=100.00 E-value=6.9e-41 Score=330.46 Aligned_cols=266 Identities=16% Similarity=0.078 Sum_probs=205.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHhhcCC
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMKNRY 202 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR~~~ 202 (408)
||||||+.+++||+|+++|++++||++||+++|++++.+.++++++.+|+||+|+.++.+.....+..+.++++.||+++
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~~~~~~~~~~~~l~~~l~~~~ 80 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKR 80 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-------CHHHHHHHHHHTTTTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCCccccchHHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999999999999999999999999999986543235667789999999999
Q ss_pred CcEEEEcCCCChHHHHHHHHhCCCeEEEecCCCcccccccccceeeeccCcCCcchhHHHHHHHHHHHcCCCCC--CCCC
Q 015347 203 YDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNAAGAGLLLSETFTAESMNLSERGYNMYEQMVDWLGRPFR--SVPR 280 (408)
Q Consensus 203 YDlvIdl~~~~~~sall~~laga~~RIG~~~~~~~~~~~~~~lt~~v~~~~~~~~~h~~~~y~~lL~~LGi~~~--~~p~ 280 (408)
||++||++++ ++++++++++|++.|+||. ..+.++++++.+..+.. ...|.+++|.++++.+|+... .++.
T Consensus 81 ~D~vid~~~~-~~sa~~~~~~~~~~~ig~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~~~~~~~~~~ 153 (348)
T 1psw_A 81 YDRAYVLPNS-FKSALVPLFAGIPHRTGWR-----GEMRYGLLNDVRVLDKE-AWPLMVERYIALAYDKGIMRTAQDLPQ 153 (348)
T ss_dssp CSEEEECSCC-SGGGHHHHHTTCSEEEEEC-----TTTCTTTCTEEECCCTT-TCCSHHHHHHHTTSCGGGCSSGGGSCS
T ss_pred CCEEEECCCC-hHHHHHHHHhCCCEEeccC-----CCcccccccccccCCCC-CCchHHHHHHHHHhhcccccccccCCc
Confidence 9999999987 8999999999999999998 43444566666542221 124788999988887776210 0110
Q ss_pred CCCCCCccccCHHHHHHHHHHHHhhCCC-CCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC-CEEEeC
Q 015347 281 HPVPPLRVSISRRLKEVVAEKYKNAGAE-QGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIP 358 (408)
Q Consensus 281 ~~~p~~~i~is~~~~~~a~~~l~~~g~~-~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~-~vvlig 358 (408)
....+.+.+++++++.+ ..++++. ++++|+||||+++.. .|+||.|+|+++++.|.+++ +++++|
T Consensus 154 -~~~~p~l~~~~~~~~~~---~~~~~~~~~~~~i~l~pga~~~~---------~k~wp~~~~~~l~~~L~~~~~~vvl~g 220 (348)
T 1psw_A 154 -PLLWPQLQVSEGEKSYT---CNQFSLSSERPMIGFCPGAEFGP---------AKRWPHYHYAELAKQLIDEGYQVVLFG 220 (348)
T ss_dssp -SCCCCCCCCCHHHHHHH---HHHTTCCSSSCEEEEECCCTTCG---------GGSCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred -ccCCceeecCHHHHHHH---HHHhCCCCCCcEEEEECCCCccc---------cCCCCHHHHHHHHHHHHHCCCeEEEEe
Confidence 11233445555554433 3445665 567999999995421 48899999999999998776 889999
Q ss_pred CcchHHHHHHHHhcCC-----Cc---cccCCHHHHHH-hcccCEEEeCCChHHHHhcCC
Q 015347 359 HEKEREGVEDVVGDDA-----SI---VFITTPGQLQI-QQPYNLQTRVKSPALHCSALS 408 (408)
Q Consensus 359 gp~E~e~~~~I~~~~~-----~~---~~i~~~~eLaA-i~~adl~I~nDSGpmHLAaa~ 408 (408)
+++|++.+++|..... +. ...+++.|+++ |++||++||||||+||||+|.
T Consensus 221 ~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Dsg~~HlAaa~ 279 (348)
T 1psw_A 221 SAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAAL 279 (348)
T ss_dssp CGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHHHHHHT
T ss_pred ChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCCHHHHHHHHc
Confidence 9999999988876543 12 12356789999 999999999999999999873
No 4
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=97.72 E-value=0.001 Score=65.40 Aligned_cols=105 Identities=10% Similarity=0.049 Sum_probs=75.0
Q ss_pred CCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecC------------------
Q 015347 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDL------------------ 181 (408)
Q Consensus 120 ~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~------------------ 181 (408)
...||||++....-|++.-..++.++|+++ +.+|++++.+.....++.. .+ +++.++.
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~v~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVTFATGEGFAGTLRKL-GF-EPVATGMPVFDGFLAALRIRFDTDS 93 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEECGGGHHHHHHT-TC-EEEECCCCHHHHHHHHHHHHHSCSC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEEEEccHHHHHHHHhc-CC-ceeecCcccccchhhhhhhhhcccC
Confidence 456999999999999999999999999998 7899999988766665543 33 3555442
Q ss_pred ------CCCCCChH----H------HHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCeEE
Q 015347 182 ------DDDWPEPA----E------YTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRV 229 (408)
Q Consensus 182 ------k~~~~~~~----~------~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~RI 229 (408)
......+. . ...+.+.+++.++|++|..... ....+.+...|+|.-+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~-~~~~~aa~~~giP~v~ 156 (412)
T 3otg_A 94 PEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISN-YGAGLAALKAGIPTIC 156 (412)
T ss_dssp CTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTC-HHHHHHHHHHTCCEEE
T ss_pred CccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchh-hHHHHHHHHcCCCEEE
Confidence 00011111 1 1456667788899999887555 6677778889998533
No 5
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.71 E-value=0.00098 Score=66.63 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=64.0
Q ss_pred CCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCc----hHhhhcCCC-CcEEEEecCCCCCCC----hHH
Q 015347 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARG----KQTFELNKN-VRWANVYDLDDDWPE----PAE 190 (408)
Q Consensus 120 ~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~----~~lle~~P~-Vd~Vi~~d~k~~~~~----~~~ 190 (408)
+.+|||++|--..=|++.+ .|++++|+++ |+.++.+++.... .++++.... .|.-+.+..... .. ...
T Consensus 23 ~~m~ki~~v~Gtr~~~~~~-a~li~~l~~~-~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~-~~~~~~~~~ 99 (396)
T 3dzc_A 23 NAMKKVLIVFGTRPEAIKM-APLVQQLCQD-NRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQ-TLNGVTSKI 99 (396)
T ss_dssp -CCEEEEEEECSHHHHHHH-HHHHHHHHHC-TTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTC-CHHHHHHHH
T ss_pred CCCCeEEEEEeccHhHHHH-HHHHHHHHhC-CCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCC-CHHHHHHHH
Confidence 4467999988777777666 8999999986 8888876665333 244443332 122222211111 11 123
Q ss_pred HHHHHHHhhcCCCcEEEEcCCCC--hHHHHHHHHhCCCe
Q 015347 191 YTDILGVMKNRYYDMVLSTKLAG--LGHAAFLFMTTARD 227 (408)
Q Consensus 191 ~~~l~~~LR~~~YDlvIdl~~~~--~~sall~~laga~~ 227 (408)
+..+.+.|++.++|+++...... +..++.++..|+|.
T Consensus 100 ~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv 138 (396)
T 3dzc_A 100 LLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPV 138 (396)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCE
Confidence 45667778889999999875441 22356677788884
No 6
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.19 E-value=0.00053 Score=68.89 Aligned_cols=117 Identities=13% Similarity=0.066 Sum_probs=61.2
Q ss_pred CcccccccccccCC-c--cEEEEEcCCChhHHHHHHHHHHHHHHHCC-CcEEEEEECCC----chHhhhcCCC-CcEEEE
Q 015347 108 NPEIASLPLKIRGD-V--RRCCCIISGGVYENLLFFPAIQLLKDRYP-GVLIDVIASAR----GKQTFELNKN-VRWANV 178 (408)
Q Consensus 108 ~~~~~~~~~~~~~~-~--~rILIIr~~~IGDvILttPvI~aLK~~yP-~A~IdvLv~~~----~~~lle~~P~-Vd~Vi~ 178 (408)
++.+.-+-+.++.+ + +||++|--..=|++.+ -|++++|+++ | +.++.+++... ..++++.... .|.-+.
T Consensus 10 ~~~~~~~~~~~~~~~m~~~kI~~v~Gtr~~~~~~-a~li~~l~~~-~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~ 87 (403)
T 3ot5_A 10 GVDLGTENLYFQSNAMAKIKVMSIFGTRPEAIKM-APLVLALEKE-PETFESTVVITAQHREMLDQVLEIFDIKPDIDLD 87 (403)
T ss_dssp ----------------CCEEEEEEECSHHHHHHH-HHHHHHHHTC-TTTEEEEEEECC-----CHHHHHHTTCCCSEECC
T ss_pred ccCcccchhhhhhhccccceEEEEEecChhHHHH-HHHHHHHHhC-CCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccc
Confidence 44555555666555 3 3899888777777776 9999999976 7 78877665442 2344443332 121122
Q ss_pred ecCCCCCCC----hHHHHHHHHHhhcCCCcEEEEcCCC--ChHHHHHHHHhCCCe
Q 015347 179 YDLDDDWPE----PAEYTDILGVMKNRYYDMVLSTKLA--GLGHAAFLFMTTARD 227 (408)
Q Consensus 179 ~d~k~~~~~----~~~~~~l~~~LR~~~YDlvIdl~~~--~~~sall~~laga~~ 227 (408)
+..... .. ...+.++.+.|++.++|+++..... .+..++.++..|+|.
T Consensus 88 v~~~~~-~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv 141 (403)
T 3ot5_A 88 IMKKGQ-TLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKML 141 (403)
T ss_dssp CCC-CC-CHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEE
T ss_pred cCCCCC-CHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCE
Confidence 211111 11 1234556777888999999987543 122356677788873
No 7
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=97.08 E-value=0.014 Score=57.27 Aligned_cols=103 Identities=17% Similarity=0.027 Sum_probs=71.4
Q ss_pred CCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCC---------------
Q 015347 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDD--------------- 184 (408)
Q Consensus 120 ~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~--------------- 184 (408)
...||||++..++-|++.-..++.++|+++ +.+|++++.+...+.++..- +. ++.+.....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~--GheV~v~~~~~~~~~~~~~G-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAA--GHEVLVAASENMGPTVTGAG-LP-FAPTCPSLDMPEVLSWDREGNRTT 88 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEEEGGGHHHHHHTT-CC-EEEEESSCCHHHHHSBCTTSCBCC
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHhCC-Ce-eEecCCccchHhhhhhhccCcccc
Confidence 456999999999999999999999999998 78999999887777666532 32 333331100
Q ss_pred CC-Ch----------------HHHHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCe
Q 015347 185 WP-EP----------------AEYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARD 227 (408)
Q Consensus 185 ~~-~~----------------~~~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~ 227 (408)
+. .. ..+..+.+.+++.++|+++.-... ....+++...|+|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~-~~~~~~a~~~giP~ 147 (398)
T 4fzr_A 89 MPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYS-LTGPLVAATLGIPW 147 (398)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC-THHHHHHHHHTCCE
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccc-cHHHHHHHhhCCCE
Confidence 00 00 011246666788899999865444 66778888899984
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.03 E-value=0.09 Score=50.55 Aligned_cols=248 Identities=10% Similarity=0.022 Sum_probs=127.0
Q ss_pred CccEEEEEcCCC---hhHH-HHHHHHHHHHHHHCCCcEEEEEECCCch---HhhhcCCCCcEEEEecCCCCCCChHHHHH
Q 015347 121 DVRRCCCIISGG---VYEN-LLFFPAIQLLKDRYPGVLIDVIASARGK---QTFELNKNVRWANVYDLDDDWPEPAEYTD 193 (408)
Q Consensus 121 ~~~rILIIr~~~---IGDv-ILttPvI~aLK~~yP~A~IdvLv~~~~~---~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~ 193 (408)
..||||+|.... .|-+ ..+.-+++.| .+.+|++++..... ..++....+ .++.++....+..+..+..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L----~g~~v~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 77 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ----DPESIVVFASTQNAEEAHAYDKTLDY-EVIRWPRSVMLPTPTTAHA 77 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS----CGGGEEEEEECSSHHHHHHHHTTCSS-EEEEESSSSCCSCHHHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh----cCCeEEEEECCCCccchhhhccccce-EEEEccccccccchhhHHH
Confidence 468999998622 3333 2233444444 57799999866655 344444444 4777665544455666778
Q ss_pred HHHHhhcCCCcEEEEcCCCCh-HHHHHHHHhCCCeEEEecCCCcccccc----ccc-------ceeeeccCcCCcchhHH
Q 015347 194 ILGVMKNRYYDMVLSTKLAGL-GHAAFLFMTTARDRVSYIYPNVNAAGA----GLL-------LSETFTAESMNLSERGY 261 (408)
Q Consensus 194 l~~~LR~~~YDlvIdl~~~~~-~sall~~laga~~RIG~~~~~~~~~~~----~~~-------lt~~v~~~~~~~~~h~~ 261 (408)
+.+.+++.++|+++....... ..+.++...|.+..|-........+.. ..+ .+..+... +...
T Consensus 78 l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s-----~~~~ 152 (394)
T 3okp_A 78 MAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYIS-----QYTL 152 (394)
T ss_dssp HHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESC-----HHHH
T ss_pred HHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcC-----HHHH
Confidence 888899999999986443312 234445566776545322000000000 000 01111111 2222
Q ss_pred HHHHHHHHHcCCCCC--CCCCCCCCCCcccc-CHHHHHHHHHHHHhhCCCCCCeEEEEcCCCCchhhccCCCCCCCCCCH
Q 015347 262 NMYEQMVDWLGRPFR--SVPRHPVPPLRVSI-SRRLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPI 338 (408)
Q Consensus 262 ~~y~~lL~~LGi~~~--~~p~~~~p~~~i~i-s~~~~~~a~~~l~~~g~~~~~~Ivihpgas~~~~~~~~~g~~~K~WP~ 338 (408)
+.+ .+..+...+ .++.. ...-.+.. .+..+. ...++.++.++.++++..|.-... | -.
T Consensus 153 ~~~---~~~~~~~~~~~vi~ng-v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~G~~~~~----------K--g~ 213 (394)
T 3okp_A 153 RRF---KSAFGSHPTFEHLPSG-VDVKRFTPATPEDKS---ATRKKLGFTDTTPVIACNSRLVPR----------K--GQ 213 (394)
T ss_dssp HHH---HHHHCSSSEEEECCCC-BCTTTSCCCCHHHHH---HHHHHTTCCTTCCEEEEESCSCGG----------G--CH
T ss_pred HHH---HHhcCCCCCeEEecCC-cCHHHcCCCCchhhH---HHHHhcCCCcCceEEEEEeccccc----------c--CH
Confidence 222 222332110 01110 10001111 233322 334556776655666666653322 2 35
Q ss_pred HHHHHHHHHHhhCC---CEEEeCCcchHHHHHHHHhcC-CCcccc--CCHHHHHH-hcccCEEEeC
Q 015347 339 QVWAEIANGLREFR---PLFVIPHEKEREGVEDVVGDD-ASIVFI--TTPGQLQI-QQPYNLQTRV 397 (408)
Q Consensus 339 e~waeLa~~L~~~~---~vvliggp~E~e~~~~I~~~~-~~~~~i--~~~~eLaA-i~~adl~I~n 397 (408)
+...+.++.|.++. .++++|...+.+.+++..... .++.+. ....++.. ++.||++|..
T Consensus 214 ~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~p 279 (394)
T 3okp_A 214 DSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMP 279 (394)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEEC
T ss_pred HHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEec
Confidence 67777777776653 577777766667666665322 223222 22378888 9999999974
No 9
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=96.90 E-value=0.028 Score=54.32 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=58.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCC-CcEEEEEECCCc--hHhhhcCCCCcEEEEecCCCCCCChH-----HHHHH
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYP-GVLIDVIASARG--KQTFELNKNVRWANVYDLDDDWPEPA-----EYTDI 194 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP-~A~IdvLv~~~~--~~lle~~P~Vd~Vi~~d~k~~~~~~~-----~~~~l 194 (408)
||||++-.. ..+.+...|++++|+++.| +.+|-+...... ..+++.. .+...+.++.......+. .+..+
T Consensus 1 mkIl~v~~~-~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (384)
T 1vgv_A 1 MKVLTVFGT-RPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF-SIVPDYDLNIMQPGQGLTEITCRILEGL 78 (384)
T ss_dssp CEEEEEECS-HHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH-TCCCSEECCCCSTTSCHHHHHHHHHHHH
T ss_pred CeEEEEecc-cHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc-CCCCCcceecCCCCccHHHHHHHHHHHH
Confidence 689987544 4556667899999999876 655544433321 2344331 121102333221112222 23567
Q ss_pred HHHhhcCCCcEEEEcCCC--ChHHHHHHHHhCCCe
Q 015347 195 LGVMKNRYYDMVLSTKLA--GLGHAAFLFMTTARD 227 (408)
Q Consensus 195 ~~~LR~~~YDlvIdl~~~--~~~sall~~laga~~ 227 (408)
.+.+++.++|+++..... ++...+.+...|+|.
T Consensus 79 ~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~ 113 (384)
T 1vgv_A 79 KPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPV 113 (384)
T ss_dssp HHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCE
T ss_pred HHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCE
Confidence 777888999999986432 123344556677774
No 10
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=96.87 E-value=0.07 Score=51.09 Aligned_cols=104 Identities=11% Similarity=0.039 Sum_probs=66.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCch--HhhhcCCCCcEEEEecCCCCC-C-------Ch----
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGK--QTFELNKNVRWANVYDLDDDW-P-------EP---- 188 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~--~lle~~P~Vd~Vi~~d~k~~~-~-------~~---- 188 (408)
||||++..+.=|....+..+.++|+++ +.+|++++..... ..++. ..+. ++.++..... . .+
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTADRMEADLVPK-HGIE-IDFIRISGLRGKGIKALIAAPLRIF 82 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECTTSTHHHHGGG-GTCE-EEECCCCCCTTCCHHHHHTCHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc--CCEEEEEecCCcchhhhccc-cCCc-eEEecCCccCcCccHHHHHHHHHHH
Confidence 899999866558888888999999886 7899999976532 23332 2332 4444322100 0 11
Q ss_pred HHHHHHHHHhhcCCCcEEEEcCCC-ChHHHHHHHHhCCCeEEE
Q 015347 189 AEYTDILGVMKNRYYDMVLSTKLA-GLGHAAFLFMTTARDRVS 230 (408)
Q Consensus 189 ~~~~~l~~~LR~~~YDlvIdl~~~-~~~sall~~laga~~RIG 230 (408)
..+..+.+.+++.++|+++..... .....+.+.+.|+|.-+-
T Consensus 83 ~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 83 NAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp HHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 133456677888899999987543 133455677788886543
No 11
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=96.83 E-value=0.0051 Score=61.40 Aligned_cols=96 Identities=15% Similarity=0.065 Sum_probs=59.9
Q ss_pred EEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCch-----Hh-hhc--CCCCcEEEEecCCCCCCChH-----HHHH
Q 015347 127 CIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGK-----QT-FEL--NKNVRWANVYDLDDDWPEPA-----EYTD 193 (408)
Q Consensus 127 IIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~-----~l-le~--~P~Vd~Vi~~d~k~~~~~~~-----~~~~ 193 (408)
|+..+.-=+.+...|++++|++. .+..+++..... ++ ++. .|.+|.-+ +...+ .+. -+..
T Consensus 13 ~~v~GtRpe~~k~~p~~~~l~~~---~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l--~~~~~--~~~~~~~~~~~~ 85 (385)
T 4hwg_A 13 MTIVGTRPELIKLCCVISEFDKH---TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFL--EVAAD--NTAKSIGLVIEK 85 (385)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHH---SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEEC--CCCCC--CSHHHHHHHHHH
T ss_pred eEEEEcCHhHHHHHHHHHHHHhc---CCEEEEEeCCCCChhHHHHHHhhCCCCCCceec--CCCCC--CHHHHHHHHHHH
Confidence 44567888999999999999987 566666554332 32 332 23444333 32222 222 2345
Q ss_pred HHHHhhcCCCcEEEEcCCC--ChHHHHHHHHhCCCeEEEec
Q 015347 194 ILGVMKNRYYDMVLSTKLA--GLGHAAFLFMTTARDRVSYI 232 (408)
Q Consensus 194 l~~~LR~~~YDlvIdl~~~--~~~sall~~laga~~RIG~~ 232 (408)
+.+.|++.++|+++..... .+. ++.++..|+| |++.
T Consensus 86 l~~~l~~~kPD~Vlv~gd~~~~~a-alaA~~~~IP--v~h~ 123 (385)
T 4hwg_A 86 VDEVLEKEKPDAVLFYGDTNSCLS-AIAAKRRKIP--IFHM 123 (385)
T ss_dssp HHHHHHHHCCSEEEEESCSGGGGG-HHHHHHTTCC--EEEE
T ss_pred HHHHHHhcCCcEEEEECCchHHHH-HHHHHHhCCC--EEEE
Confidence 6667888999999986432 244 7778888888 4444
No 12
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=95.86 E-value=0.61 Score=44.73 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=60.6
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCch----HhhhcCCCCcEEEEecCCCCCCCh-----HHHH
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGK----QTFELNKNVRWANVYDLDDDWPEP-----AEYT 192 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~----~lle~~P~Vd~Vi~~d~k~~~~~~-----~~~~ 192 (408)
+||||++... .++.....|++++|++. |+.++.+++..... ..++. -.+...+.++....-..+ ..+.
T Consensus 5 mmkIl~v~~~-~~~~~~~~~l~~~L~~~-~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (376)
T 1v4v_A 5 MKRVVLAFGT-RPEATKMAPVYLALRGI-PGLKPLVLLTGQHREQLRQALSL-FGIQEDRNLDVMQERQALPDLAARILP 81 (376)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHTS-TTEEEEEEECSSCHHHHHHHHHT-TTCCCSEECCCCSSCCCHHHHHHHHHH
T ss_pred ceEEEEEEec-cHHHHHHHHHHHHHHhC-CCCceEEEEcCCcHHHHHHHHHH-cCCCcccccccCCCCccHHHHHHHHHH
Confidence 5899999865 44455678999999985 77888877754432 23333 222210223321111122 1234
Q ss_pred HHHHHhhcCCCcEEEEcCCC--ChHHHHHHHHhCCCe
Q 015347 193 DILGVMKNRYYDMVLSTKLA--GLGHAAFLFMTTARD 227 (408)
Q Consensus 193 ~l~~~LR~~~YDlvIdl~~~--~~~sall~~laga~~ 227 (408)
.+.+.+++.++|+++..... .+...+.++..|+|.
T Consensus 82 ~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~ 118 (376)
T 1v4v_A 82 QAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPV 118 (376)
T ss_dssp HHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCE
Confidence 56777888999999985432 122345567788885
No 13
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=95.41 E-value=0.42 Score=46.67 Aligned_cols=103 Identities=10% Similarity=0.017 Sum_probs=62.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCc--hHhhhcCCCCcEEEEecCC-----CCC---CCh----
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARG--KQTFELNKNVRWANVYDLD-----DDW---PEP---- 188 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~--~~lle~~P~Vd~Vi~~d~k-----~~~---~~~---- 188 (408)
+||||.--+-=|-+.=+..+.++|+++ +.+|.|++.++. +.+++... ++ +..++.. ..+ ..+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~--g~~V~~vg~~~g~e~~~v~~~g-~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 78 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR--GYAVHWLGTPRGIENDLVPKAG-LP-LHLIQVSGLRGKGLKSLVKAPLELL 78 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECSSSTHHHHTGGGT-CC-EEECC--------------CHHHHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC--CCEEEEEECCchHhhchhhhcC-Cc-EEEEECCCcCCCCHHHHHHHHHHHH
Confidence 678876544336666666778999987 789999998765 34444322 22 3333321 111 111
Q ss_pred HHHHHHHHHhhcCCCcEEEEcCCC-ChHHHHHHHHhCCCeEE
Q 015347 189 AEYTDILGVMKNRYYDMVLSTKLA-GLGHAAFLFMTTARDRV 229 (408)
Q Consensus 189 ~~~~~l~~~LR~~~YDlvIdl~~~-~~~sall~~laga~~RI 229 (408)
..++...+.||+.+.|++|.+.+. +.-..+.+++.|+|.-+
T Consensus 79 ~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 79 KSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp HHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEE
Confidence 233455667899999999988655 13345568889998654
No 14
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=95.20 E-value=0.86 Score=43.78 Aligned_cols=108 Identities=13% Similarity=0.023 Sum_probs=57.1
Q ss_pred cCCccEEEEEcCCC----hhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhc--CCCCcEEEEecCCCCC----CCh
Q 015347 119 RGDVRRCCCIISGG----VYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL--NKNVRWANVYDLDDDW----PEP 188 (408)
Q Consensus 119 ~~~~~rILIIr~~~----IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~--~P~Vd~Vi~~d~k~~~----~~~ 188 (408)
...+||||+|.... =|-.....-++++|++. +.+|++++......-+.. .... +++.++....+ ...
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 93 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGSVARLRFGP 93 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCCTTSCCCTTEEECC-CCC------------CCH
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCccccCCcccccCC-cEEeccccCCcccccccH
Confidence 35679999998642 23346667889999987 679999997655431110 0011 23333321110 112
Q ss_pred HHHHHHHHHhhcCCCcEEEEcCCCChH-HHHHHHHhCCCeEE
Q 015347 189 AEYTDILGVMKNRYYDMVLSTKLAGLG-HAAFLFMTTARDRV 229 (408)
Q Consensus 189 ~~~~~l~~~LR~~~YDlvIdl~~~~~~-sall~~laga~~RI 229 (408)
..+..+.+.+++.+||+++........ ..++....+++.-+
T Consensus 94 ~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 94 ATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 233566777888899999976544222 33344455776544
No 15
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=94.98 E-value=2.8 Score=40.45 Aligned_cols=85 Identities=9% Similarity=0.067 Sum_probs=53.7
Q ss_pred HHHHhhCCCCCCeEEEEcCCCC-chhhccCCCCCCCCCCHHHHHHHHHHHhhC----C-CEEEeCCcchH--HHHHHHHh
Q 015347 300 EKYKNAGAEQGKYIVIHGIESD-SKASMQSRGDTDSLLPIQVWAEIANGLREF----R-PLFVIPHEKER--EGVEDVVG 371 (408)
Q Consensus 300 ~~l~~~g~~~~~~Ivihpgas~-~~~~~~~~g~~~K~WP~e~waeLa~~L~~~----~-~vvliggp~E~--e~~~~I~~ 371 (408)
...++.++.++ ++++..|.-. .. | -.+...+.+..+.++ . .++++|...+. +.++++..
T Consensus 241 ~~~~~~~~~~~-~~i~~~G~~~~~~----------K--g~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~ 307 (439)
T 3fro_A 241 SLLSKFGMDEG-VTFMFIGRFDRGQ----------K--GVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEE 307 (439)
T ss_dssp HHHHHHTCCSC-EEEEEECCSSCTT----------B--CHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCCC-cEEEEEccccccc----------c--cHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHh
Confidence 34556677655 6666666543 22 2 356777888887663 3 57777766555 66667665
Q ss_pred cCCCccccC---CHHHHHH-hcccCEEEeC
Q 015347 372 DDASIVFIT---TPGQLQI-QQPYNLQTRV 397 (408)
Q Consensus 372 ~~~~~~~i~---~~~eLaA-i~~adl~I~n 397 (408)
...+..... ...++.. ++.||++|.+
T Consensus 308 ~~~~~~~~~g~~~~~~~~~~~~~adv~v~p 337 (439)
T 3fro_A 308 KHGNVKVITEMLSREFVRELYGSVDFVIIP 337 (439)
T ss_dssp HCTTEEEECSCCCHHHHHHHHTTCSEEEEC
T ss_pred hcCCEEEEcCCCCHHHHHHHHHHCCEEEeC
Confidence 554433222 2367888 9999999865
No 16
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.73 E-value=1.1 Score=43.62 Aligned_cols=85 Identities=11% Similarity=0.077 Sum_probs=47.6
Q ss_pred HHhhCCCCCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhC----C-CEEEeCC----cchHHHHHHHHhc
Q 015347 302 YKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREF----R-PLFVIPH----EKEREGVEDVVGD 372 (408)
Q Consensus 302 l~~~g~~~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~----~-~vvligg----p~E~e~~~~I~~~ 372 (408)
..++++.....+++..|.-... | -.+...+.+..+.++ . .++++|. ..+.+.+++.+..
T Consensus 234 r~~~~~~~~~~~i~~~G~~~~~----------K--g~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~ 301 (438)
T 3c48_A 234 RRELGIPLHTKVVAFVGRLQPF----------K--GPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEE 301 (438)
T ss_dssp HHHTTCCSSSEEEEEESCBSGG----------G--CHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHH
T ss_pred HHhcCCCCCCcEEEEEeeeccc----------C--CHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHH
Confidence 4456665556666666643322 2 345666677776654 3 5677776 2344555555543
Q ss_pred C---CCccccC--CHHHHHH-hcccCEEEeCC
Q 015347 373 D---ASIVFIT--TPGQLQI-QQPYNLQTRVK 398 (408)
Q Consensus 373 ~---~~~~~i~--~~~eLaA-i~~adl~I~nD 398 (408)
. .++.+.. +..++.. ++.||++|..-
T Consensus 302 ~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps 333 (438)
T 3c48_A 302 LGVEKRIRFLDPRPPSELVAVYRAADIVAVPS 333 (438)
T ss_dssp TTCTTTEEEECCCCHHHHHHHHHHCSEEEECC
T ss_pred cCCCCcEEEcCCCChHHHHHHHHhCCEEEECc
Confidence 2 2333222 2368888 99999999753
No 17
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=94.68 E-value=0.31 Score=47.66 Aligned_cols=105 Identities=8% Similarity=-0.060 Sum_probs=73.2
Q ss_pred CCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCC------------
Q 015347 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPE------------ 187 (408)
Q Consensus 120 ~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~------------ 187 (408)
..+||||++...+.|++.=..++.++|+++ +.+|++++.+...+.++... + .+..++..-....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~v~~~~~~~~~~~~~G-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVSYVTAGGFAEPVRAAG-A-TVVPYQSEIIDADAAEVFGSDDLGV 93 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGGGHHHHHHTT-C-EEEECCCSTTTCCHHHHHHSSSSCH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEEEEeCHHHHHHHHhcC-C-EEEeccccccccccchhhccccHHH
Confidence 457899999999999999999999999998 88999999988888776553 2 3444442110000
Q ss_pred -----hH-----HHHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCeE
Q 015347 188 -----PA-----EYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDR 228 (408)
Q Consensus 188 -----~~-----~~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~R 228 (408)
.. ....+.+.+++.++|++|.-........+++...|+|.-
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v 144 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAV 144 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEE
Confidence 00 112455667888999999531232556777888899853
No 18
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=94.43 E-value=0.3 Score=47.24 Aligned_cols=105 Identities=10% Similarity=-0.041 Sum_probs=72.8
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCC--------CC-CChH---
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD--------DW-PEPA--- 189 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~--------~~-~~~~--- 189 (408)
++|||++...+-|++.-..++.++|+++ |.+|++++.+...+.++... + .++.++... .+ ..+.
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~~~~~~~~~~~~~G-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR--GHRITYVTTPLFADEVKAAG-A-EVVLYKSEFDTFHVPEVVKQEDAETQL 79 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECHHHHHHHHHTT-C-EEEECCCGGGTSSSSSSSCCTTHHHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC--CCEEEEEcCHHHHHHHHHcC-C-EEEecccccccccccccccccchHHHH
Confidence 5699999999999999999999999998 88999999887777776543 2 344444210 00 0111
Q ss_pred ----------HHHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCeEEEe
Q 015347 190 ----------EYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSY 231 (408)
Q Consensus 190 ----------~~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~RIG~ 231 (408)
....+.+.+++.++|++|.-+.......+++...|+|. |.+
T Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~-v~~ 130 (402)
T 3ia7_A 80 HLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPA-VRL 130 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCE-EEE
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCE-EEE
Confidence 02345666788999999964223255677788899984 444
No 19
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=94.43 E-value=1 Score=44.24 Aligned_cols=102 Identities=10% Similarity=-0.096 Sum_probs=63.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCC---------CCCCh----H
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD---------DWPEP----A 189 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~---------~~~~~----~ 189 (408)
|||||+..+..||+.=..++.++|+++ |.++++++.+...+.++... + .++.+.... ..... .
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~--Gh~V~v~~~~~~~~~v~~~g-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLREL--GADARMCLPPDYVERCAEVG-V-PMVPVGRAVRAGAREPGELPPGAAEVVT 76 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHT--TCCEEEEECGGGHHHHHHTT-C-CEEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHC--CCeEEEEeCHHHHHHHHHcC-C-ceeecCCCHHHHhccccCCHHHHHHHHH
Confidence 799999999999999999999999987 77999999988888776542 2 233333210 00011 1
Q ss_pred -HHHHHHHHhhc--CCCcEEEEcCCCChH--HHHHHHHhCCCeE
Q 015347 190 -EYTDILGVMKN--RYYDMVLSTKLAGLG--HAAFLFMTTARDR 228 (408)
Q Consensus 190 -~~~~l~~~LR~--~~YDlvIdl~~~~~~--sall~~laga~~R 228 (408)
.+...+..+++ ++.|++|.-...... ..+++...|+|.-
T Consensus 77 ~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v 120 (404)
T 3h4t_A 77 EVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYR 120 (404)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEE
Confidence 11122222221 479999764333122 2566778899854
No 20
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=94.36 E-value=0.47 Score=46.62 Aligned_cols=103 Identities=9% Similarity=-0.063 Sum_probs=71.4
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCC--CC-------CChH---
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD--DW-------PEPA--- 189 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~--~~-------~~~~--- 189 (408)
++|||++-...-|++.-..++.++|+++ +.+|++++.......++.. +++ ++.++... .. .++.
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPVFADKVAAT-GPR-PVLYHSTLPGPDADPEAWGSTLLDNV 82 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGGGHHHHHTT-SCE-EEECCCCSCCTTSCGGGGCSSHHHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHHHHHHHHhC-CCE-EEEcCCcCccccccccccchhhHHHH
Confidence 5799999888999999999999999987 7899999988776655542 343 45554321 00 1111
Q ss_pred ---------HHHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCeEE
Q 015347 190 ---------EYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRV 229 (408)
Q Consensus 190 ---------~~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~RI 229 (408)
....+.+.+++.++|++|.-... ....+++...|+|.-+
T Consensus 83 ~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~-~~~~~~A~~~giP~v~ 130 (430)
T 2iyf_A 83 EPFLNDAIQALPQLADAYADDIPDLVLHDITS-YPARVLARRWGVPAVS 130 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCSEEEEETTC-HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCEEEECCcc-HHHHHHHHHcCCCEEE
Confidence 12335556778899999975554 5667778888998543
No 21
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=94.16 E-value=0.24 Score=48.01 Aligned_cols=100 Identities=11% Similarity=-0.056 Sum_probs=68.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEe-cCCC--------CCC-------
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVY-DLDD--------DWP------- 186 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~-d~k~--------~~~------- 186 (408)
||||++..++-|.+.-..|++++|+++ +.+|++++.+...+.++.. .+ .++.+ .... ...
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~--GheV~v~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQAS--GHEVLIAAPPELQATAHGA-GL-TTAGIRGNDRTGDTGGTTQLRFPNPAFG 77 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHT--TCEEEEEECHHHHHHHHHB-TC-EEEEC--------------CCSCCGGGG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHC--CCEEEEecChhhHHHHHhC-CC-ceeeecCCccchhhhhhhcccccccccc
Confidence 799999999999999999999999987 6799999977665554432 12 22333 1100 000
Q ss_pred -----Ch---------HH-------HHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCe
Q 015347 187 -----EP---------AE-------YTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARD 227 (408)
Q Consensus 187 -----~~---------~~-------~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~ 227 (408)
.. .. ...+.+.+++.++|++|..... ....+.+...|+|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~-~~~~~aa~~~giP~ 138 (391)
T 3tsa_A 78 QRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCA-LIGRVLGGLLDLPV 138 (391)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC-HHHHHHHHHTTCCE
T ss_pred cccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcch-hHHHHHHHHhCCCE
Confidence 00 00 3355677788899999876555 77788888899984
No 22
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=94.09 E-value=0.34 Score=47.16 Aligned_cols=99 Identities=6% Similarity=-0.112 Sum_probs=51.3
Q ss_pred cEEEEEcCC--ChhH-HHHHHHHHHHHHHHCCCcEEEEEECCCch-HhhhcCCCCcEE--EEecCCCCCCChHHHHHHHH
Q 015347 123 RRCCCIISG--GVYE-NLLFFPAIQLLKDRYPGVLIDVIASARGK-QTFELNKNVRWA--NVYDLDDDWPEPAEYTDILG 196 (408)
Q Consensus 123 ~rILIIr~~--~IGD-vILttPvI~aLK~~yP~A~IdvLv~~~~~-~lle~~P~Vd~V--i~~d~k~~~~~~~~~~~l~~ 196 (408)
||||+|... ..|- ...+.-+.++|+++ .+|++++..... ..+...+..+.. ..++.-. .....+..+.+
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~---~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ 75 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA---HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLN--EQGFYYSGLSE 75 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT---SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCC--STTCCHHHHHH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc---CCeEEEeecCCCcccccccccCCccccccccccc--cccchHHHHHH
Confidence 789998642 2232 23445678888887 477777744431 111111100000 0011111 11234567788
Q ss_pred HhhcCCCcEEEEcCCCChHHHHHHHHhCCC
Q 015347 197 VMKNRYYDMVLSTKLAGLGHAAFLFMTTAR 226 (408)
Q Consensus 197 ~LR~~~YDlvIdl~~~~~~sall~~laga~ 226 (408)
.+++.+||+++.....+....++..+.+.+
T Consensus 76 ~l~~~~~Div~~~~~~~~~~~~~~~~~~~~ 105 (413)
T 3oy2_A 76 FIDVHKPDIVMIYNDPIVIGNYLLAMGKCS 105 (413)
T ss_dssp HHHHHCCSEEEEEECHHHHHHHHHHGGGCC
T ss_pred HHHhcCCCEEEEcchHHHHHHHHHHhccCC
Confidence 899999999998733323344455555554
No 23
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=93.83 E-value=0.34 Score=47.29 Aligned_cols=103 Identities=10% Similarity=-0.059 Sum_probs=72.9
Q ss_pred CCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCC---------------
Q 015347 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDD--------------- 184 (408)
Q Consensus 120 ~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~--------------- 184 (408)
...||||++..++-|.+.-..++.++|+++ |.+|++++. ...+.++... + .++.+.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~~~-~~~~~~~~~G-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVLIAVA-EHADRAAAAG-L-EVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEES-SCHHHHHTTT-C-EEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEEEecc-chHHHHHhCC-C-eeEecCCccCHHHHhhhcccCCccc
Confidence 345899999999999999999999999997 889999998 7766665432 3 3454442100
Q ss_pred -----------CCCh---------HHHHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCeE
Q 015347 185 -----------WPEP---------AEYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDR 228 (408)
Q Consensus 185 -----------~~~~---------~~~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~R 228 (408)
.... .....+.+.+++.++|++|.-... ....+++...|+|.-
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~-~~~~~aA~~~giP~v 155 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGA-TVGLLAADRAGVPAV 155 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTC-HHHHHHHHHHTCCEE
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchh-hHHHHHHHHcCCCEE
Confidence 0000 112356677888899999875445 667788889999953
No 24
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=93.25 E-value=4.4 Score=38.00 Aligned_cols=76 Identities=11% Similarity=-0.004 Sum_probs=49.2
Q ss_pred ccEEEEEcCC---------------ChhH-HHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCC
Q 015347 122 VRRCCCIISG---------------GVYE-NLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDW 185 (408)
Q Consensus 122 ~~rILIIr~~---------------~IGD-vILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~ 185 (408)
.||||++... ..|- -..+.-++++|+++ +.++++++....... . +.+-.+..
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~--G~~v~v~~~~~~~~~---~---~~~~~~~~---- 70 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLEL--GHEVFLLGAPGSPAG---R---PGLTVVPA---- 70 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHT--TCEEEEESCTTSCCC---S---TTEEECSC----
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHc--CCeEEEEecCCCCCC---C---CcceeccC----
Confidence 5899999877 3343 34555688899887 779999986654321 1 22222221
Q ss_pred CChHHHHHHHHHhhcCCCcEEEEcCCC
Q 015347 186 PEPAEYTDILGVMKNRYYDMVLSTKLA 212 (408)
Q Consensus 186 ~~~~~~~~l~~~LR~~~YDlvIdl~~~ 212 (408)
.. +..+.+.+++.+||+++.....
T Consensus 71 ~~---~~~l~~~l~~~~~Dvi~~~~~~ 94 (342)
T 2iuy_A 71 GE---PEEIERWLRTADVDVVHDHSGG 94 (342)
T ss_dssp CS---HHHHHHHHHHCCCSEEEECSSS
T ss_pred Cc---HHHHHHHHHhcCCCEEEECCch
Confidence 11 3467778888999999876433
No 25
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=93.12 E-value=0.49 Score=46.99 Aligned_cols=108 Identities=16% Similarity=0.130 Sum_probs=72.9
Q ss_pred ccccCCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCC------------
Q 015347 116 LKIRGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD------------ 183 (408)
Q Consensus 116 ~~~~~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~------------ 183 (408)
+..+..+||||++..+.-|++.-..++.++|+++ +.+|+|++.+...+.++.. +++ ++.++...
T Consensus 14 ~~~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~--GheV~~~~~~~~~~~v~~~-G~~-~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 14 LVPRGSHMRVVFSSMASKSHLFGLVPLAWAFRAA--GHEVRVVASPALTEDITAA-GLT-AVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp -----CCCEEEEECCSCHHHHTTTHHHHHHHHHT--TCEEEEEECGGGHHHHHTT-TCC-EEECSCCCCHHHHHHHTTHH
T ss_pred ccccCCccEEEEEcCCCcchHhHHHHHHHHHHHC--CCeEEEEeCchhHHHHHhC-CCc-eeecCCccchHHHhhhhhcc
Confidence 3445667999999889999999999999999996 8899999998887776543 233 33333210
Q ss_pred --------CC----CC-------------h----------H-HHHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCe
Q 015347 184 --------DW----PE-------------P----------A-EYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARD 227 (408)
Q Consensus 184 --------~~----~~-------------~----------~-~~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~ 227 (408)
.+ .. + . ....+++.+++.++|++|.-... .-..+++...|+|.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~-~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLT-FAAPIAAAVTGTPH 168 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTC-THHHHHHHHHTCCE
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcc-hhHHHHHHHcCCCE
Confidence 00 00 0 0 22334445677899999976655 66778888999995
Q ss_pred E
Q 015347 228 R 228 (408)
Q Consensus 228 R 228 (408)
-
T Consensus 169 v 169 (441)
T 2yjn_A 169 A 169 (441)
T ss_dssp E
T ss_pred E
Confidence 3
No 26
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=93.00 E-value=6.2 Score=37.28 Aligned_cols=103 Identities=16% Similarity=0.078 Sum_probs=59.0
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCC-cEEEEEECCCchH----hhhcCCCCcEEEEecCC-CCCCCh----HHH
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPG-VLIDVIASARGKQ----TFELNKNVRWANVYDLD-DDWPEP----AEY 191 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~-A~IdvLv~~~~~~----lle~~P~Vd~Vi~~d~k-~~~~~~----~~~ 191 (408)
.||||++.. ..++.....+++++|+++ |+ .++.+++...... +++.. .+...+.+... ...... ..+
T Consensus 8 ~mkIl~v~~-~~~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T 3beo_A 8 RLKVMTIFG-TRPEAIKMAPLVLELQKH-PEKIESIVTVTAQHRQMLDQVLSIF-GITPDFDLNIMKDRQTLIDITTRGL 84 (375)
T ss_dssp CEEEEEEEC-SHHHHHHHHHHHHHHTTC-TTTEEEEEEECCSSSHHHHHHHHHH-TCCCSEECCCCCTTCCHHHHHHHHH
T ss_pred CceEEEEec-CcHHHHHHHHHHHHHHhC-CCCCCeEEEEcCCCHHHHHHHHHHc-CCCCccccccCCCcccHHHHHHHHH
Confidence 489999974 477877888999999987 76 7777777554322 22211 11110111111 111111 123
Q ss_pred HHHHHHhhcCCCcEEEEcCCCChH---HHHHHHHhCCCeE
Q 015347 192 TDILGVMKNRYYDMVLSTKLAGLG---HAAFLFMTTARDR 228 (408)
Q Consensus 192 ~~l~~~LR~~~YDlvIdl~~~~~~---sall~~laga~~R 228 (408)
..+.+.+++.++|+++..... +. ..+.+...|++.-
T Consensus 85 ~~l~~~l~~~~pDvv~~~~~~-~~~~~~~~~~~~~~ip~v 123 (375)
T 3beo_A 85 EGLDKVMKEAKPDIVLVHGDT-TTTFIASLAAFYNQIPVG 123 (375)
T ss_dssp HHHHHHHHHHCCSEEEEETTS-HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCCCEEEEeCCc-hHHHHHHHHHHHHCCCEE
Confidence 456777888999999884332 22 2244566788753
No 27
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=92.26 E-value=1.8 Score=42.45 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=71.9
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCC--CC------CC-ChHH--
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLD--DD------WP-EPAE-- 190 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k--~~------~~-~~~~-- 190 (408)
++|||++-..+-|++.-..++.++|+++ |.+|++++.+...+.++.. .+ +++.++.. .. +. .+..
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~--Gh~V~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVAR--GHRVSYAITDEFAAQVKAA-GA-TPVVYDSILPKESNPEESWPEDQESAM 87 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHH-TC-EEEECCCCSCCTTCTTCCCCSSHHHHH
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHC--CCeEEEEeCHHHHHHHHhC-CC-EEEecCccccccccchhhcchhHHHHH
Confidence 5799999999999999999999999987 8899999999887776543 22 34444321 00 01 1111
Q ss_pred ----------HHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCeEEEe
Q 015347 191 ----------YTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSY 231 (408)
Q Consensus 191 ----------~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~RIG~ 231 (408)
...+...+++.++|++|.-... .-...++...|+|. +.+
T Consensus 88 ~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~-~~~~~~A~~lgIP~-v~~ 136 (424)
T 2iya_A 88 GLFLDEAVRVLPQLEDAYADDRPDLIVYDIAS-WPAPVLGRKWDIPF-VQL 136 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSEEEEETTC-THHHHHHHHHTCCE-EEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCEEEEcCcc-cHHHHHHHhcCCCE-EEE
Confidence 1234455677899999976544 44566777789994 444
No 28
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=92.21 E-value=1.8 Score=41.71 Aligned_cols=100 Identities=8% Similarity=0.009 Sum_probs=68.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCC--------------CC-C-
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDD--------------DW-P- 186 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~--------------~~-~- 186 (408)
||||++....-|++.-..++.++|+++ +.+|++++.+.....++.. +++ ++.+.... .+ .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA--GHQVVMAANQDMGPVVTGV-GLP-AVATTDLPIRHFITTDREGRPEAIPSD 76 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHT-TCC-EEESCSSCHHHHHHBCTTSCBCCCCCS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC--CCEEEEEeCHHHHHHHHhC-CCE-EEEeCCcchHHHHhhhcccCccccCcc
Confidence 699999999999999999999999986 7899999988776666543 333 33332210 01 1
Q ss_pred -C----h-H---------HHHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCe
Q 015347 187 -E----P-A---------EYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARD 227 (408)
Q Consensus 187 -~----~-~---------~~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~ 227 (408)
. + . ...++.+.+++.++|++|..... ....+++...|+|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~-~~~~~~a~~~giP~ 131 (384)
T 2p6p_A 77 PVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMS-YVAPLLALHLGVPH 131 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC-THHHHHHHHHTCCE
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcch-hhHHHHHHhcCCCE
Confidence 0 0 1 11234455677899999986555 55667788889985
No 29
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=92.11 E-value=1.4 Score=42.55 Aligned_cols=102 Identities=14% Similarity=-0.021 Sum_probs=70.1
Q ss_pred CccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecC------------------C
Q 015347 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDL------------------D 182 (408)
Q Consensus 121 ~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~------------------k 182 (408)
+.||||++-..+.|.+.=..++.++|+++ |.+|++++.+....+.+. ....+ .+.. .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~r--Gh~Vt~~t~~~~~~~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 95 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRAL--GHEVRYATGGDIRAVAEA--GLCAV-DVSPGVNYAKLFVPDDTDVTDPM 95 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEEECSSTHHHHTT--TCEEE-ESSTTCCSHHHHSCCC-------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHC--CCEEEEEeCcchhhHHhc--CCeeE-ecCCchhHhhhcccccccccccc
Confidence 36999999999999999999999999999 889999999887776543 11111 1100 0
Q ss_pred CC-CCChH------------HHHHHHHHhhcCCCcEEEEcCCCChHHHHHHHHhCCCeE
Q 015347 183 DD-WPEPA------------EYTDILGVMKNRYYDMVLSTKLAGLGHAAFLFMTTARDR 228 (408)
Q Consensus 183 ~~-~~~~~------------~~~~l~~~LR~~~YDlvIdl~~~~~~sall~~laga~~R 228 (408)
.. ..... ....++..+++.++|++|..... ....+++...|++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~-~~~~~~A~~~gip~~ 153 (400)
T 4amg_A 96 HSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQ-GAGPLTAAALQLPCV 153 (400)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTC-THHHHHHHHTTCCEE
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcch-HHHHHHHHHcCCCce
Confidence 00 00000 11234566788899999987666 667778888888853
No 30
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=91.40 E-value=8.5 Score=36.79 Aligned_cols=83 Identities=13% Similarity=0.097 Sum_probs=46.6
Q ss_pred HhhCCCCCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC--CEEEeCCcchHHHHHHHHhcCC---Ccc
Q 015347 303 KNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR--PLFVIPHEKEREGVEDVVGDDA---SIV 377 (408)
Q Consensus 303 ~~~g~~~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~--~vvliggp~E~e~~~~I~~~~~---~~~ 377 (408)
.+.++..++.+++..|.-... | -.+...+.+..+.++. .++++|...+.+.+++.+.... ++.
T Consensus 203 ~~~~~~~~~~~i~~~G~~~~~----------K--g~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~ 270 (394)
T 2jjm_A 203 KEYGISESEKILIHISNFRKV----------K--RVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVL 270 (394)
T ss_dssp HHTTCC---CEEEEECCCCGG----------G--THHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBC
T ss_pred HHcCCCCCCeEEEEeeccccc----------c--CHHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEE
Confidence 445664444555555543332 2 3567777777776553 5777776556666666655432 232
Q ss_pred ccCCHHHHHH-hcccCEEEeC
Q 015347 378 FITTPGQLQI-QQPYNLQTRV 397 (408)
Q Consensus 378 ~i~~~~eLaA-i~~adl~I~n 397 (408)
+.....++.. ++.||++|.+
T Consensus 271 ~~g~~~~~~~~~~~adv~v~p 291 (394)
T 2jjm_A 271 FLGKQDNVAELLAMSDLMLLL 291 (394)
T ss_dssp CCBSCSCTHHHHHTCSEEEEC
T ss_pred EeCchhhHHHHHHhCCEEEec
Confidence 2222356777 9999998854
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=91.18 E-value=4.5 Score=38.13 Aligned_cols=81 Identities=11% Similarity=0.024 Sum_probs=48.5
Q ss_pred cEEEEEcCC--Chh-HHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHH----HHHHH
Q 015347 123 RRCCCIISG--GVY-ENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAE----YTDIL 195 (408)
Q Consensus 123 ~rILIIr~~--~IG-DvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~----~~~l~ 195 (408)
||||++... ..| -...+.-++++|+++ +.+|++++....... ..++ +|+.++.... ..... ...+.
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~---~~~~-~v~~~~~~~~-~~~~~~~~~~~~l~ 73 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAAR--GHHVRVYTQSWEGDC---PKAF-ELIQVPVKSH-TNHGRNAEYYAWVQ 73 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHT--TCCEEEEESEECSCC---CTTC-EEEECCCCCS-SHHHHHHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhC--CCeEEEEecCCCCCC---CCCc-EEEEEccCcc-cchhhHHHHHHHHH
Confidence 689998664 233 344555778899887 679999986533222 1344 4665554322 22211 23455
Q ss_pred HHhhcCCCcEEEEcC
Q 015347 196 GVMKNRYYDMVLSTK 210 (408)
Q Consensus 196 ~~LR~~~YDlvIdl~ 210 (408)
+.+++.++|+++...
T Consensus 74 ~~i~~~~~Dvv~~~~ 88 (374)
T 2iw1_A 74 NHLKEHPADRVVGFN 88 (374)
T ss_dssp HHHHHSCCSEEEESS
T ss_pred HHHhccCCCEEEEec
Confidence 667888999998754
No 32
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=89.64 E-value=1.4 Score=43.14 Aligned_cols=102 Identities=11% Similarity=-0.057 Sum_probs=68.4
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCC--CCC-----CC----hHHH
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLD--DDW-----PE----PAEY 191 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k--~~~-----~~----~~~~ 191 (408)
||||++.....|++.-..++.++|+++ |.+|++++.+.....++.. +++ ++.++.. ... .. +..+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~--Gh~V~~~~~~~~~~~v~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL--GVQTRMCAPPAAEERLAEV-GVP-HVPVGLPQHMMLQEGMPPPPPEEEQRL 76 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHH-TCC-EEECSCCGGGCCCTTSCCCCHHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC--CCeEEEEeCHHHHHHHHHc-CCe-eeecCCCHHHHHhhccccchhHHHHHH
Confidence 699999999999999999999999986 8999999998877766542 333 3333321 000 01 1111
Q ss_pred -----HHHHHHhh--cCCCcEEEEcCCCChH--HHHHHHHhCCCeE
Q 015347 192 -----TDILGVMK--NRYYDMVLSTKLAGLG--HAAFLFMTTARDR 228 (408)
Q Consensus 192 -----~~l~~~LR--~~~YDlvIdl~~~~~~--sall~~laga~~R 228 (408)
..+++.++ ..++|++|.-.....- ...++...|+|.-
T Consensus 77 ~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v 122 (416)
T 1rrv_A 77 AAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFF 122 (416)
T ss_dssp HHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEE
Confidence 33455566 6799998854322144 5667888999953
No 33
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=89.49 E-value=0.88 Score=43.30 Aligned_cols=84 Identities=2% Similarity=-0.033 Sum_probs=53.2
Q ss_pred cEEEEEcCC----ChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHh
Q 015347 123 RRCCCIISG----GVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVM 198 (408)
Q Consensus 123 ~rILIIr~~----~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~L 198 (408)
|||+|..-+ |+|=+.=..-+.++|+ ++.++|......+++..++ .|+.++.. ... .++..|
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~------~v~F~~~~~~~~~~~~~g~--~v~~l~~~----d~~---~~~~~l 65 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS------DVSFACLPLEGSLIDEIPY--PVYELSSE----SIY---ELINLI 65 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS------SEEEEECCCTTCCGGGCCS--CEEECSSS----CHH---HHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH------hCEEEEecCcHhHHHHCCC--eEEEcCcc----CHH---HHHHHH
Confidence 456655443 7888888888888887 6899998776666666533 35555432 222 456667
Q ss_pred hcCCCcEEEEcCCCChHHHHHHHH
Q 015347 199 KNRYYDMVLSTKLAGLGHAAFLFM 222 (408)
Q Consensus 199 R~~~YDlvIdl~~~~~~sall~~l 222 (408)
++.+.|++|.=+.. ........+
T Consensus 66 ~~~~~d~lIvD~Y~-~~~~~~~~l 88 (282)
T 3hbm_A 66 KEEKFELLIIDHYG-ISVDDEKLI 88 (282)
T ss_dssp HHHTCSEEEEECTT-CCHHHHHHH
T ss_pred HhCCCCEEEEECCC-CCHHHHHHH
Confidence 77789999965555 334444333
No 34
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=87.82 E-value=3.6 Score=40.27 Aligned_cols=101 Identities=10% Similarity=-0.028 Sum_probs=67.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCC---------CCCC-ChHHH-
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLD---------DDWP-EPAEY- 191 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k---------~~~~-~~~~~- 191 (408)
||||++-....|++.=..++.++|+++ +.+|++++.+.....++.. +++ ++.++.. ..+. .+..+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~--Gh~V~~~~~~~~~~~v~~~-g~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDL--GADVRMCAPPDCAERLAEV-GVP-HVPVGPSARAPIQRAKPLTAEDVRRFT 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHT-TCC-EEECCC-------CCSCCCHHHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHC--CCeEEEEcCHHHHHHHHHc-CCe-eeeCCCCHHHHhhcccccchHHHHHHH
Confidence 689999999999999999999999986 8999999998877766542 333 2222211 0000 01111
Q ss_pred ----HHHHHHhh--cCCCcEEEEcC-CCChH--HHHHHHHhCCCeE
Q 015347 192 ----TDILGVMK--NRYYDMVLSTK-LAGLG--HAAFLFMTTARDR 228 (408)
Q Consensus 192 ----~~l~~~LR--~~~YDlvIdl~-~~~~~--sall~~laga~~R 228 (408)
..+++.++ +.++|++|.-. .. .- ...++...|+|.-
T Consensus 77 ~~~~~~~~~~l~~~~~~pD~vi~d~~~~-~~~~~~~~A~~lgiP~v 121 (415)
T 1iir_A 77 TEAIATQFDEIPAAAEGCAAVVTTGLLA-AAIGVRSVAEKLGIPYF 121 (415)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEEEESCHH-HHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHhcCCCEEEECChhH-hHhhHHHHHHHhCCCEE
Confidence 23445554 57999998543 33 44 5667888899953
No 35
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=81.06 E-value=11 Score=32.16 Aligned_cols=85 Identities=7% Similarity=0.012 Sum_probs=50.9
Q ss_pred HHHhhCCCCCCeEEEEcCCCC-chhhccCCCCCCCCCCHHHHHHHHHHHh--hCC---CEEEeCCcc--hHHHHHHHHhc
Q 015347 301 KYKNAGAEQGKYIVIHGIESD-SKASMQSRGDTDSLLPIQVWAEIANGLR--EFR---PLFVIPHEK--EREGVEDVVGD 372 (408)
Q Consensus 301 ~l~~~g~~~~~~Ivihpgas~-~~~~~~~~g~~~K~WP~e~waeLa~~L~--~~~---~vvliggp~--E~e~~~~I~~~ 372 (408)
..+++++.+.+ +++..|.-. . .| -.+...+.+..+. ++. .++++|... ..+.+++....
T Consensus 27 ~r~~~~~~~~~-~i~~~G~~~~~----------~K--~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~ 93 (200)
T 2bfw_A 27 LLSKFGMDEGV-TFMFIGRFDRG----------QK--GVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK 93 (200)
T ss_dssp HHHHTTCCSCE-EEEEESCBCSS----------SS--CHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCC-EEEEeeccccc----------cC--CHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHh
Confidence 34566776545 455555432 2 13 3557777777775 443 577777655 55666666554
Q ss_pred CCCccc-cC--CHHHHHH-hcccCEEEeCC
Q 015347 373 DASIVF-IT--TPGQLQI-QQPYNLQTRVK 398 (408)
Q Consensus 373 ~~~~~~-i~--~~~eLaA-i~~adl~I~nD 398 (408)
..++.+ .. ...++.. ++.||++|..-
T Consensus 94 ~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps 123 (200)
T 2bfw_A 94 HGNVKVITEMLSREFVRELYGSVDFVIIPS 123 (200)
T ss_dssp CTTEEEECSCCCHHHHHHHHTTCSEEEECC
T ss_pred cCCEEEEeccCCHHHHHHHHHHCCEEEECC
Confidence 444443 22 2258888 99999999753
No 36
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=71.62 E-value=4.3 Score=36.21 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=40.1
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhc
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~ 169 (408)
+||++..++++| .+...-+++.|++. +++|++++++.++.++..
T Consensus 2 k~IllgvTGs~a-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASG-VIYGIKLLQVLEEL--DFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTT-HHHHHHHHHHHHHT--TCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEEChhHHHHhhH
Confidence 799999999999 67888999999988 899999999999988876
No 37
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=60.91 E-value=95 Score=30.87 Aligned_cols=105 Identities=12% Similarity=0.010 Sum_probs=66.3
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcC---------CCCcEEEEecCCC-------C-
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELN---------KNVRWANVYDLDD-------D- 184 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~---------P~Vd~Vi~~d~k~-------~- 184 (408)
.++||++-.-+.|-++=...+.+.|.++ |.+||+++.+.+...+... +.|+ ++.++..- .
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~r--G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~lp~~~~~~~~ 84 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLR--GFHITFVNTEYNHKRLLKSRGPKAFDGFTDFN-FESIPDGLTPMEGDGDV 84 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEEEHHHHHHHC------------CEE-EEEECCCCC--------
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhC--CCeEEEEeCCchhhhhccccccccccCCCceE-EEECCCCCCCcccccCc
Confidence 4699999999999999999999999987 8999999988776554332 3554 34443110 0
Q ss_pred CCChH------------HHHHHHHHhhc----CCCcEEEEcCCCChHHHHHHHHhCCCeEEEe
Q 015347 185 WPEPA------------EYTDILGVMKN----RYYDMVLSTKLAGLGHAAFLFMTTARDRVSY 231 (408)
Q Consensus 185 ~~~~~------------~~~~l~~~LR~----~~YDlvIdl~~~~~~sall~~laga~~RIG~ 231 (408)
-..+. .+.++++.+++ .++|++|.=... .-...++...|+|. +.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~-~~~~~vA~~lgiP~-v~~ 145 (482)
T 2pq6_A 85 SQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCM-SFTIQAAEEFELPN-VLY 145 (482)
T ss_dssp -CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTC-THHHHHHHHTTCCE-EEE
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcc-hhHHHHHHHcCCCE-EEE
Confidence 00111 12244555553 589999954334 23445666678873 443
No 38
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=60.45 E-value=24 Score=28.87 Aligned_cols=60 Identities=8% Similarity=0.036 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhhCC--CEEEeCCcchHHHHHHHHhcCC-Cccc-cCCHHHHHH-hcccCEEEeC
Q 015347 338 IQVWAEIANGLREFR--PLFVIPHEKEREGVEDVVGDDA-SIVF-ITTPGQLQI-QQPYNLQTRV 397 (408)
Q Consensus 338 ~e~waeLa~~L~~~~--~vvliggp~E~e~~~~I~~~~~-~~~~-i~~~~eLaA-i~~adl~I~n 397 (408)
.+.+.+.++.|.+.. .++++|...+.+.+++.+.... ++.+ .....++.. ++.||++|.+
T Consensus 17 ~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~adv~v~p 81 (166)
T 3qhp_A 17 QSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGFVNSNELLEILKTCTLYVHA 81 (166)
T ss_dssp HHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEECCCCCHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEEeecCHHHHHHHHHhCCEEEEC
Confidence 456666666664332 5777776666666666554332 2222 112367888 9999999974
No 39
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=53.47 E-value=44 Score=30.44 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=58.7
Q ss_pred cCCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECC-CchHhh--hcCCCCcEEEEecCCCCCCChHHH-HHH
Q 015347 119 RGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASA-RGKQTF--ELNKNVRWANVYDLDDDWPEPAEY-TDI 194 (408)
Q Consensus 119 ~~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~-~~~~ll--e~~P~Vd~Vi~~d~k~~~~~~~~~-~~l 194 (408)
++.++||+++-.+. |++ +.+++++|++..-+++|..|+.. ....+. ...-+|. ++.++.++ +.....+ -.+
T Consensus 19 ~~~~~rI~~l~SG~-g~~--~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp-~~~~~~~~-~~~r~~~~~~~ 93 (229)
T 3auf_A 19 QGHMIRIGVLISGS-GTN--LQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVD-ALHMDPAA-YPSRTAFDAAL 93 (229)
T ss_dssp BTTCEEEEEEESSC-CHH--HHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCE-EEECCGGG-SSSHHHHHHHH
T ss_pred cCCCcEEEEEEeCC-cHH--HHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCC-EEEECccc-ccchhhccHHH
Confidence 44568999886554 554 67889999887657888777643 333332 2334564 55555432 1222222 346
Q ss_pred HHHhhcCCCcEEEEcCCC-ChHHHHHHH
Q 015347 195 LGVMKNRYYDMVLSTKLA-GLGHAAFLF 221 (408)
Q Consensus 195 ~~~LR~~~YDlvIdl~~~-~~~sall~~ 221 (408)
+..|++.+.|++|..... -....++..
T Consensus 94 ~~~l~~~~~Dliv~agy~~IL~~~~l~~ 121 (229)
T 3auf_A 94 AERLQAYGVDLVCLAGYMRLVRGPMLTA 121 (229)
T ss_dssp HHHHHHTTCSEEEESSCCSCCCHHHHHH
T ss_pred HHHHHhcCCCEEEEcChhHhCCHHHHhh
Confidence 788899999999987442 123444443
No 40
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=53.04 E-value=1.1e+02 Score=31.39 Aligned_cols=106 Identities=12% Similarity=0.126 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHhhCCCCCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhh-----C-C--CEEEeCCcchHH
Q 015347 293 RLKEVVAEKYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLRE-----F-R--PLFVIPHEKERE 364 (408)
Q Consensus 293 ~~~~~a~~~l~~~g~~~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~-----~-~--~vvliggp~E~e 364 (408)
+-.+.++....+++. +.++|++|.--++.... -.+..|.+.|.+.++.+.. . . ..|++. .+|.+
T Consensus 279 ~i~~~I~~~~~~l~~-~~piVGVHIRrGDk~~~------E~~~~~~~~Y~~~v~~~~~~l~~~~~~~~~~ifLA-TDDp~ 350 (526)
T 2de0_X 279 WLEKEIEEATKKLGF-KHPVIGVHVRRTDKVGT------EAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLA-TDDPS 350 (526)
T ss_dssp HHHHHHHHHHHHHTC-CSSEEEEEECCC-----------CCCSCSHHHHHHHHHHHHHHHHTTSCCSSCEEEEE-ESCHH
T ss_pred HHHHHHHHHHHHhCC-CCCEEEEEEeCCCCCcc------ccccCCHHHHHHHHHHHHHHHHhhcCCCCCeEEEE-cCCHH
Confidence 334455555656555 56899999755443100 0245787778777774432 1 1 334443 56666
Q ss_pred HHHHHHhcCCCccccC--------------C---H----HHHHHhcccCEEEeC-CChHHHHhc
Q 015347 365 GVEDVVGDDASIVFIT--------------T---P----GQLQIQQPYNLQTRV-KSPALHCSA 406 (408)
Q Consensus 365 ~~~~I~~~~~~~~~i~--------------~---~----~eLaAi~~adl~I~n-DSGpmHLAa 406 (408)
.++++....++..+++ + . .+|..++.||.+||+ -|..-.+|+
T Consensus 351 v~~e~k~~~p~~~~~~d~~~~~~a~~~~R~s~~~l~~~l~DL~lLs~cd~~Vgt~sS~~srla~ 414 (526)
T 2de0_X 351 LLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAY 414 (526)
T ss_dssp HHHHHHHHCTTSEEECCCCSSCSSGGGGGTCCTHHHHHHHHHHHHHHSSEEEECTTSHHHHHHH
T ss_pred HHHHHHHhCCCCEEecCcccccccCccccccHHHHHHHHHHHHHHhcCCeeecCCCCHHHHHHH
Confidence 7777765444432111 0 1 234448999999998 666666654
No 41
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=47.49 E-value=74 Score=28.45 Aligned_cols=95 Identities=21% Similarity=0.312 Sum_probs=57.0
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECC-CchHhh--hcCCCCcEEEEecCCCCCCChHHH-HHHHHH
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASA-RGKQTF--ELNKNVRWANVYDLDDDWPEPAEY-TDILGV 197 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~-~~~~ll--e~~P~Vd~Vi~~d~k~~~~~~~~~-~~l~~~ 197 (408)
++||.|+-.+. |++ +.+++++|++..-+++|..|+.. ...++. ...-+|. ++.++.++ +.....+ -.++..
T Consensus 3 m~ki~vl~sG~-g~~--~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp-~~~~~~~~-~~~~~~~~~~~~~~ 77 (212)
T 3av3_A 3 MKRLAVFASGS-GTN--FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVP-AFVFSPKD-YPSKAAFESEILRE 77 (212)
T ss_dssp CEEEEEECCSS-CHH--HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCC-EEECCGGG-SSSHHHHHHHHHHH
T ss_pred CcEEEEEEECC-cHH--HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCC-EEEeCccc-ccchhhhHHHHHHH
Confidence 46877776554 664 66789999877556888877643 344444 2334565 44444432 2232222 256788
Q ss_pred hhcCCCcEEEEcCCC-ChHHHHHHH
Q 015347 198 MKNRYYDMVLSTKLA-GLGHAAFLF 221 (408)
Q Consensus 198 LR~~~YDlvIdl~~~-~~~sall~~ 221 (408)
|++.+.|++|..... -....++..
T Consensus 78 l~~~~~Dliv~a~y~~il~~~~l~~ 102 (212)
T 3av3_A 78 LKGRQIDWIALAGYMRLIGPTLLSA 102 (212)
T ss_dssp HHHTTCCEEEESSCCSCCCHHHHHH
T ss_pred HHhcCCCEEEEchhhhhCCHHHHhh
Confidence 899999999987532 234445443
No 42
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=43.47 E-value=22 Score=32.08 Aligned_cols=46 Identities=11% Similarity=0.075 Sum_probs=37.4
Q ss_pred CCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhc
Q 015347 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (408)
Q Consensus 120 ~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~ 169 (408)
...+|||+..++++|- +-+.-+++.|++.. +|++++++.+..++..
T Consensus 17 l~~k~IllgvTGsiaa-~k~~~ll~~L~~~g---~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAA-IKFGNLCHCFTEWA---EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp --CCEEEEEECSSGGG-GGHHHHHHHHHTTS---EEEEEECTGGGGTCCG
T ss_pred cCCCEEEEEEeCcHHH-HHHHHHHHHHhcCC---CEEEEEcchHHHhcCH
Confidence 4468999999999984 55888999999875 9999999988877644
No 43
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=43.23 E-value=14 Score=32.63 Aligned_cols=45 Identities=11% Similarity=-0.020 Sum_probs=38.4
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhc
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~ 169 (408)
.+||++..++++|=. -..-+++.|++. +++|+++.++.++.++..
T Consensus 2 ~k~IllgvTGs~aa~-k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 2 YGKLLICATASINVI-NINHYIVELKQH--FDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCCEEEEECSCGGGG-GHHHHHHHHTTT--SSCEEEEECGGGGGTSCG
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHC--CCEEEEEEchhHHHHHHH
Confidence 378999999999877 788999999887 899999999988877643
No 44
>3l0o_A Transcription termination factor RHO; helicase, RHO factor, RNA capture mechanism, ATP-binding, hydrolase, nucleotide-binding, RN binding; 2.35A {Thermotoga maritima}
Probab=42.97 E-value=94 Score=31.11 Aligned_cols=98 Identities=10% Similarity=0.079 Sum_probs=68.4
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcE-EEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHH------HHH
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVL-IDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEY------TDI 194 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~-IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~------~~l 194 (408)
..|++|+-..+.|=.+|..=+++.+.+.++++. |-+++.++...+-+-...+..+++..-.+. .-..++ +.+
T Consensus 175 GQR~lIfg~~g~GKT~Ll~~Ia~~i~~~~~dv~~V~~lIGER~~EV~d~~~~~~G~VV~atade-p~~~r~~~a~~alti 253 (427)
T 3l0o_A 175 GQRGMIVAPPKAGKTTILKEIANGIAENHPDTIRIILLIDERPEEVTDIRESTNAIVIAAPFDM-PPDKQVKVAELTLEM 253 (427)
T ss_dssp TCEEEEEECTTCCHHHHHHHHHHHHHHHCTTSEEEEEECSCCHHHHSSSSSSCCSEEEECCTTS-CHHHHHHHHHHHHHH
T ss_pred CceEEEecCCCCChhHHHHHHHHHHhhcCCCeEEEEEEeccCcchHHHHHHHhCCeEEEECCCC-CHHHHHHHHHHHHHH
Confidence 579999999999999999888999999999987 555678888887665554443554443332 211111 334
Q ss_pred HHHhhcCCCcEEEEcCCCChHHHHHHH
Q 015347 195 LGVMKNRYYDMVLSTKLAGLGHAAFLF 221 (408)
Q Consensus 195 ~~~LR~~~YDlvIdl~~~~~~sall~~ 221 (408)
...+|.+..|++|.+..- .+.+-..+
T Consensus 254 AEyfrd~G~dVLil~Dsl-TR~A~A~r 279 (427)
T 3l0o_A 254 AKRLVEFNYDVVILLDSL-TRLARVYN 279 (427)
T ss_dssp HHHHHHTTCEEEEEEECH-HHHHHHHH
T ss_pred HHHHHHcCCCEEEecccc-hHHHHHHH
Confidence 556788899999988666 55554433
No 45
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=41.91 E-value=20 Score=32.32 Aligned_cols=48 Identities=21% Similarity=0.277 Sum_probs=38.0
Q ss_pred CccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcC
Q 015347 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELN 170 (408)
Q Consensus 121 ~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~ 170 (408)
..+|||+..++++| .+-..-+++.|++. .+++|++++++.+..++...
T Consensus 18 ~~k~IllgvTGsia-a~k~~~lv~~L~~~-~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 18 RKFHVLVGVTGSVA-ALKLPLLVSKLLDI-PGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp SSEEEEEEECSSGG-GGTHHHHHHHHC----CEEEEEEECTGGGGSSCGG
T ss_pred CCCEEEEEEeChHH-HHHHHHHHHHHhcc-cCCEEEEEECHhHHHHhCHH
Confidence 35899999999999 44567889999873 38999999999998887654
No 46
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*
Probab=41.56 E-value=1.7e+02 Score=27.32 Aligned_cols=31 Identities=13% Similarity=-0.050 Sum_probs=25.1
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCC
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPG 152 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~ 152 (408)
.+.|++...+|||+.++..-..-++...+.-
T Consensus 4 ~r~iv~~~~gGLGNqm~~~a~a~~~A~~t~r 34 (330)
T 2hhc_A 4 ERFVISRRRTGFGDCLWSLASAWSYAQRTGR 34 (330)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 4566667778999999999888888888744
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=40.84 E-value=74 Score=30.48 Aligned_cols=89 Identities=11% Similarity=0.063 Sum_probs=52.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEEC-CCchHhhhcC-CCCcE-EEEecCCCCCCChHHHHHHHHHhh
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIAS-ARGKQTFELN-KNVRW-ANVYDLDDDWPEPAEYTDILGVMK 199 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~-~~~~~lle~~-P~Vd~-Vi~~d~k~~~~~~~~~~~l~~~LR 199 (408)
++|.+. ...+|......+++++|++++ +|.+.+. +....+.+.. +.|.. +. ++.. . ...+.+.||
T Consensus 41 ~~iwih-~~s~G~~~~~~~L~~~L~~~~---~v~v~~~~~~~~~~~~~~~~~v~~~~~-~p~~----~---~~~l~~~l~ 108 (374)
T 2xci_A 41 GALWVH-TASIGEFNTFLPILKELKREH---RILLTYFSPRAREYLKTKSDFYDCLHP-LPLD----N---PFSVKRFEE 108 (374)
T ss_dssp TCEEEE-CSSHHHHHHHHHHHHHHHHHS---CEEEEESCGGGHHHHHTTGGGCSEEEE-CCCS----S---HHHHHHHHH
T ss_pred CCEEEE-cCCHHHHHHHHHHHHHHHhcC---CEEEEEcCCcHHHHHHHhcccccceeE-CCCC----C---HHHHHHHHH
Confidence 345544 466899999999999999998 5544443 2233323221 34441 11 3321 1 345667788
Q ss_pred cCCCcEEEEcCCCChHHHHHHHHhC
Q 015347 200 NRYYDMVLSTKLAGLGHAAFLFMTT 224 (408)
Q Consensus 200 ~~~YDlvIdl~~~~~~sall~~lag 224 (408)
+.++|+++..... ....++..+.+
T Consensus 109 ~~~pDiv~~~~~~-~~~~~~~~~~~ 132 (374)
T 2xci_A 109 LSKPKALIVVERE-FWPSLIIFTKV 132 (374)
T ss_dssp HHCCSEEEEESCC-CCHHHHHHCCS
T ss_pred HhCCCEEEEECcc-CcHHHHHHHhC
Confidence 8899999976554 22334444333
No 48
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=40.36 E-value=73 Score=30.29 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=29.3
Q ss_pred CccEEEEEcCCC-hhH-HHHHHHHHHHHHHHCCCcEEEEEECCCchHh
Q 015347 121 DVRRCCCIISGG-VYE-NLLFFPAIQLLKDRYPGVLIDVIASARGKQT 166 (408)
Q Consensus 121 ~~~rILIIr~~~-IGD-vILttPvI~aLK~~yP~A~IdvLv~~~~~~l 166 (408)
..||||++.... .|- .....-+++.|++. +.++++++.......
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~--G~~v~v~~~~~~~~~ 84 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSI--GIEARWFVIEGPTEF 84 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHT--TCEEEEEECCCCHHH
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhC--CCeEEEEEccCCcch
Confidence 468999998753 233 23334567888876 779999886655443
No 49
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=39.94 E-value=23 Score=31.65 Aligned_cols=44 Identities=23% Similarity=0.246 Sum_probs=38.0
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhh
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle 168 (408)
|||++-.++++|= +-..-+++.|++. ++++|++++++.++.++.
T Consensus 1 ~~IllgvTGsiaa-~k~~~ll~~L~~~-~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGA-PLGVALLQALREM-PNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCH-HHHHHHHHHHHTC-TTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHH-HHHHHHHHHHHhc-cCCEEEEEECchHHHHhH
Confidence 6899999999986 4588899999864 689999999999988876
No 50
>2fyi_A HTH-type transcriptional regulator CBL; Lys-R family, cofactor-binding DO cysteine biosynthesis; 2.80A {Escherichia coli K12} SCOP: c.94.1.1
Probab=39.88 E-value=48 Score=28.37 Aligned_cols=49 Identities=12% Similarity=0.181 Sum_probs=31.0
Q ss_pred cCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhc--CCCCcEEEEe
Q 015347 129 ISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL--NKNVRWANVY 179 (408)
Q Consensus 129 r~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~--~P~Vd~Vi~~ 179 (408)
....++. .+..+++..++++||+++|.+..... ..+++. .-.+|=.+..
T Consensus 20 ~~~~~~~-~~l~~~l~~f~~~~P~v~l~l~~~~~-~~~~~~l~~g~~Dl~i~~ 70 (228)
T 2fyi_A 20 TTHTQAR-YSLPEVIKAFRELFPEVRLELIQGTP-QEIATLLQNGEADIGIAS 70 (228)
T ss_dssp ECHHHHH-HTHHHHHHHHHHHCTTEEEEEEECCH-HHHHHHHHHTSCSEEEES
T ss_pred eccchHH-HHHHHHHHHHHHHCCCcEEEEEeCCH-HHHHHHHHcCCccEEEEe
Confidence 3344554 44568999999999999999876432 233322 2456655544
No 51
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=39.27 E-value=23 Score=32.51 Aligned_cols=95 Identities=9% Similarity=-0.035 Sum_probs=51.3
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHH-CCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHhhcC
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDR-YPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMKNR 201 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~-yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR~~ 201 (408)
||||||+++.--+ ||--+-+.++.. .|+.+|++++-+.. -+.|+....++ ..-...++.++++.++
T Consensus 2 mrilvINPnts~~--~T~~i~~~~~~~~~p~~~i~~~t~~~g------p~~i~~~~d~~-----~a~~~l~~~~~~l~~~ 68 (245)
T 3qvl_A 2 VRIQVINPNTSLA--MTETIGAAARAVAAPGTEILAVCPRAG------VPSIEGHFDEA-----IAAVGVLEQIRAGREQ 68 (245)
T ss_dssp EEEEEECSSCCHH--HHHHHHHHHHHHCCTTEEEEEECCSSS------CSSCCSHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCHH--HHHHHHHHHHHhcCCCCEEEEEeCCCC------chhhcChhHHH-----HHHHHHHHHHHHHHHC
Confidence 7999999986433 444444555544 69999999885522 22333221110 0112345566667778
Q ss_pred CCcEEEEcCCCChHHHHHHHHhCCCeEEEe
Q 015347 202 YYDMVLSTKLAGLGHAAFLFMTTARDRVSY 231 (408)
Q Consensus 202 ~YDlvIdl~~~~~~sall~~laga~~RIG~ 231 (408)
.+|.++..-+.......+.-...+|. +|-
T Consensus 69 g~d~iviaCnt~~~l~~lr~~~~iPv-igi 97 (245)
T 3qvl_A 69 GVDGHVIASFGDPGLLAARELAQGPV-IGI 97 (245)
T ss_dssp TCSEEEEC-CCCTTHHHHHHHCSSCE-EEH
T ss_pred CCCEEEEeCCChhHHHHHHHHcCCCE-ECc
Confidence 99999975333121122333345553 554
No 52
>3hhf_B Transcriptional regulator, LYSR family; transcription factor, structur genomics, oxford protein production facility, OPPF; 2.30A {Neisseria meningitidis serogroup B}
Probab=38.43 E-value=53 Score=27.26 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=33.8
Q ss_pred CCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEec
Q 015347 130 SGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYD 180 (408)
Q Consensus 130 ~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d 180 (408)
...++.. +..++++.++++||+++|.+........+.+ -.+|=++...
T Consensus 14 ~~~~~~~-~l~~~l~~f~~~~P~v~l~i~~~~~~~~l~~--g~~D~~i~~~ 61 (213)
T 3hhf_B 14 AMPMVLH-LLAPLAAKFNERYPHIRLSLVSSEGYINLIE--RKVDIALRAG 61 (213)
T ss_dssp CHHHHHH-THHHHHHHHHHHCTTEEEEEECCSTTHHHHT--TSSSEEEECC
T ss_pred CHHHHHH-HHHHHHHHHHHHCCCcEEEEEeCCcHHHHHh--CCccEEEEEe
Confidence 3345543 5579999999999999999997655555332 5677666654
No 53
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=37.54 E-value=29 Score=30.40 Aligned_cols=43 Identities=23% Similarity=0.201 Sum_probs=36.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhh
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle 168 (408)
|||++..++++|=. -..-+++.|++. +++|+++.++.++.++.
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~--g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSK--FDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTT--CSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHC--CCEEEEEECcCHHHHhh
Confidence 79999999999866 577888999886 89999999998887654
No 54
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=37.31 E-value=70 Score=26.62 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhCCCEEEeCCcchHHHHHHHHh--c--C-CCcccc--CCHHHHHH-hcccCEEEe
Q 015347 338 IQVWAEIANGLREFRPLFVIPHEKEREGVEDVVG--D--D-ASIVFI--TTPGQLQI-QQPYNLQTR 396 (408)
Q Consensus 338 ~e~waeLa~~L~~~~~vvliggp~E~e~~~~I~~--~--~-~~~~~i--~~~~eLaA-i~~adl~I~ 396 (408)
.+...+.++.+. ...++++|...+.+.+++... . . .++.+. ....|+.. ++.||++|.
T Consensus 38 ~~~li~a~~~l~-~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ 103 (177)
T 2f9f_A 38 IELQLEVFKKLQ-DEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLC 103 (177)
T ss_dssp HHHHHHHHHHCT-TSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHhCC-CcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCEEEe
Confidence 445555555552 226788877555444544443 2 1 133322 22367888 999999997
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=36.88 E-value=28 Score=35.61 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=29.4
Q ss_pred CccEEEEE--------cCCChhHHHHHHHHHHHHHHHCCCcEEEEEEC
Q 015347 121 DVRRCCCI--------ISGGVYENLLFFPAIQLLKDRYPGVLIDVIAS 160 (408)
Q Consensus 121 ~~~rILII--------r~~~IGDvILttPvI~aLK~~yP~A~IdvLv~ 160 (408)
.-||||.| +.+||||++-.+| ++|+++ |.+|+|++.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~--~aL~~~--G~~V~Vi~P 51 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLP--PAMAAN--GHRVMVISP 51 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHH--HHHHTT--TCEEEEEEE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHH--HHHHHc--CCeEEEEec
Confidence 35899988 4799999998887 788877 778888873
No 56
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=36.82 E-value=30 Score=31.18 Aligned_cols=44 Identities=16% Similarity=0.145 Sum_probs=31.9
Q ss_pred ccEEEEEcCCChhHHHH-HHHHHHHHHHHCCCcEEEEEECCCchHhhh
Q 015347 122 VRRCCCIISGGVYENLL-FFPAIQLLKDRYPGVLIDVIASARGKQTFE 168 (408)
Q Consensus 122 ~~rILIIr~~~IGDvIL-ttPvI~aLK~~yP~A~IdvLv~~~~~~lle 168 (408)
.|||++..+++++ ..- +.-+++.|++. +++|++++++.+..++.
T Consensus 5 ~k~IllgiTGsia-ayk~~~~ll~~L~~~--g~eV~vv~T~~A~~vl~ 49 (207)
T 3mcu_A 5 GKRIGFGFTGSHC-TYEEVMPHLEKLIAE--GAEVRPVVSYTVQSTNT 49 (207)
T ss_dssp TCEEEEEECSCGG-GGTTSHHHHHHHHHT--TCEEEEEECC-------
T ss_pred CCEEEEEEEChHH-HHHHHHHHHHHHHhC--CCEEEEEEehHHHHHHH
Confidence 4899999999964 554 78999999987 89999999998875553
No 57
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=36.69 E-value=1.2e+02 Score=24.82 Aligned_cols=71 Identities=10% Similarity=-0.119 Sum_probs=40.2
Q ss_pred CCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC-CEEEeCCcchHHHHHHHHhcCCCccccCCHHH--HH
Q 015347 310 GKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQ--LQ 386 (408)
Q Consensus 310 ~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~-~vvliggp~E~e~~~~I~~~~~~~~~i~~~~e--La 386 (408)
++.|++..|+... ..+.+...++++.+.+.. .++++++..+.+. ...++.+.....+ +.
T Consensus 21 ~~~vlv~~Gs~~~------------~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~------~~~~v~~~~~~~~~~~l 82 (170)
T 2o6l_A 21 NGVVVFSLGSMVS------------NMTEERANVIASALAQIPQKVLWRFDGNKPDT------LGLNTRLYKWIPQNDLL 82 (170)
T ss_dssp TCEEEEECCSCCT------------TCCHHHHHHHHHHHTTSSSEEEEECCSSCCTT------CCTTEEEESSCCHHHHH
T ss_pred CCEEEEECCCCcc------------cCCHHHHHHHHHHHHhCCCeEEEEECCcCccc------CCCcEEEecCCCHHHHh
Confidence 4677777665432 267888899999987654 5666655443221 1123322211122 22
Q ss_pred HhcccCEEEeCC
Q 015347 387 IQQPYNLQTRVK 398 (408)
Q Consensus 387 Ai~~adl~I~nD 398 (408)
+...||++|+.-
T Consensus 83 ~~~~ad~~I~~~ 94 (170)
T 2o6l_A 83 GHPKTRAFITHG 94 (170)
T ss_dssp TSTTEEEEEECC
T ss_pred cCCCcCEEEEcC
Confidence 138999999963
No 58
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=36.28 E-value=38 Score=30.55 Aligned_cols=45 Identities=9% Similarity=0.066 Sum_probs=38.5
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhc
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~ 169 (408)
.|||++..++++|=.- ..-+++.|++. +++|++++++.++.++..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~--g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQE--EREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHT--TCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHC--CCEEEEEECccHHHHHHH
Confidence 4899999999999655 77889999987 899999999999887643
No 59
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=35.98 E-value=1.5e+02 Score=28.99 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=57.4
Q ss_pred ccEEEEEcCC--------------ChhHH-HHHHHHHHHHHHHCCCcEEEEEECCCch---Hh----hhc---CCCCcEE
Q 015347 122 VRRCCCIISG--------------GVYEN-LLFFPAIQLLKDRYPGVLIDVIASARGK---QT----FEL---NKNVRWA 176 (408)
Q Consensus 122 ~~rILIIr~~--------------~IGDv-ILttPvI~aLK~~yP~A~IdvLv~~~~~---~l----le~---~P~Vd~V 176 (408)
.||||+|... ..|-+ ....-++++|.++ +.+|++++..... +- ++. ..+|. |
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~-v 83 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM--GVQVDIITRRIKDENWPEFSGEIDYYQETNKVR-I 83 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT--TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEE-E
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc--CCeEEEEeCCCCcccccchhhhHHhccCCCCeE-E
Confidence 4899999863 23433 4455678888887 7799999864332 11 222 34553 5
Q ss_pred EEecCCCC-CC---Ch----HH-HHHHHHHhhc--CCCcEEEEcCCC-ChHHHHHHHHhCCCeEE
Q 015347 177 NVYDLDDD-WP---EP----AE-YTDILGVMKN--RYYDMVLSTKLA-GLGHAAFLFMTTARDRV 229 (408)
Q Consensus 177 i~~d~k~~-~~---~~----~~-~~~l~~~LR~--~~YDlvIdl~~~-~~~sall~~laga~~RI 229 (408)
+.++.... +. .+ .. ...+.+.+|+ .+||++..-... +.-..+++...|++.-+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~ 148 (499)
T 2r60_A 84 VRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTF 148 (499)
T ss_dssp EEECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEE
T ss_pred EEecCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEE
Confidence 55543211 00 11 11 2356666777 589998764211 11222344556887543
No 60
>2qsx_A Putative transcriptional regulator, LYSR family; the putative transcriptional regulator, PSI-2, structure initiative, MCSG; 1.64A {Vibrio parahaemolyticus}
Probab=34.81 E-value=53 Score=28.10 Aligned_cols=55 Identities=7% Similarity=0.100 Sum_probs=35.9
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEec
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYD 180 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d 180 (408)
.++=|-.+..+|.. +..|+|..++++||+++|++.+......+. ...+|=.|.+.
T Consensus 19 G~lrI~~~~~~~~~-~L~~~l~~f~~~~P~i~l~l~~~~~~~~l~--~~~~Dlai~~~ 73 (218)
T 2qsx_A 19 ELLVVDVTPSFASL-WLVPNINDFHQRHPNIRVKILTGDGAVKNI--HGESDLHVRCL 73 (218)
T ss_dssp CEEEEEECHHHHHH-THHHHHHHHHHHCTTCEEEEEECCSCC-------CCSEEEEEE
T ss_pred CcEEEecCHHHHHH-HHHHHHHHHHHHCCCeEEEEEecCCccccc--CCCCCEEEEcC
Confidence 34445555667765 456999999999999999999876553332 23467555543
No 61
>3kos_A HTH-type transcriptional activator AMPR; alpha-beta sandwich, DNA-binding, transcription regulation; HET: MES; 1.83A {Citrobacter freundii} PDB: 3kot_A
Probab=33.51 E-value=69 Score=26.85 Aligned_cols=54 Identities=13% Similarity=0.215 Sum_probs=35.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEec
Q 015347 124 RCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYD 180 (408)
Q Consensus 124 rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d 180 (408)
+|=|-....++.. +..++|+.++++||+++|.+.+......+.++ .+|=.+.+.
T Consensus 13 ~l~Ig~~~~~~~~-~l~~~l~~f~~~~P~i~l~i~~~~~~~~l~~g--~~Dl~i~~~ 66 (219)
T 3kos_A 13 KLKIGVVGTFAIG-CLFPLLSDFKRSYPHIDLHISTHNNRVDPAAE--GLDYTIRYG 66 (219)
T ss_dssp EEEEEEEHHHHHH-THHHHHHHHHHHCTTEEEEEEEECSCCCHHHH--TCSEEEEEE
T ss_pred cEEEEeCHHHHHH-HHHhHHHHHHHHCCCceEEEEeccCccccccC--CccEEEEeC
Confidence 3333334455544 45699999999999999999886555444443 366555544
No 62
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=33.25 E-value=1.5e+02 Score=28.24 Aligned_cols=72 Identities=13% Similarity=0.063 Sum_probs=50.0
Q ss_pred CccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCC-chHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHhh
Q 015347 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASAR-GKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMK 199 (408)
Q Consensus 121 ~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~-~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR 199 (408)
+.+||||+-.+.++ .++++++|+. +.++.++..+. ..+-+. ..|+.+..+..+ .-.++..++
T Consensus 6 ~~~~ilI~g~g~~~-----~~~~~a~~~~--G~~~v~v~~~~~~~~~~~---~ad~~~~~~~~d-------~~~l~~~~~ 68 (403)
T 4dim_A 6 DNKRLLILGAGRGQ-----LGLYKAAKEL--GIHTIAGTMPNAHKPCLN---LADEISYMDISN-------PDEVEQKVK 68 (403)
T ss_dssp CCCEEEEECCCGGG-----HHHHHHHHHH--TCEEEEEECSSCCHHHHH---HCSEEEECCTTC-------HHHHHHHTT
T ss_pred CCCEEEEECCcHhH-----HHHHHHHHHC--CCEEEEEcCCCCCCcchh---hCCeEEEecCCC-------HHHHHHHHH
Confidence 46899999998753 5689999987 77887776543 444333 356777766432 235666778
Q ss_pred cCCCcEEEEc
Q 015347 200 NRYYDMVLST 209 (408)
Q Consensus 200 ~~~YDlvIdl 209 (408)
+.+.|.++-.
T Consensus 69 ~~~~d~v~~~ 78 (403)
T 4dim_A 69 DLNLDGAATC 78 (403)
T ss_dssp TSCCSEEECC
T ss_pred HcCCCEEEeC
Confidence 8899999864
No 63
>3mz1_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative, MI center for STR uctural genomics, MCSG; 1.88A {Sinorhizobium meliloti}
Probab=33.09 E-value=1e+02 Score=27.12 Aligned_cols=54 Identities=22% Similarity=0.261 Sum_probs=36.3
Q ss_pred EEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecC
Q 015347 125 CCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDL 181 (408)
Q Consensus 125 ILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~ 181 (408)
|=|-....++. .+..+++..++++||+++|++.+......+.++ .+|=++....
T Consensus 90 l~I~~~~~~~~-~~l~~~l~~f~~~~P~v~i~~~~~~~~~~l~~~--~~Dl~i~~~~ 143 (300)
T 3mz1_A 90 LRVETASAFAN-LVIIPALPEFHKKYPDIQIDLGVSDRTIDYLAE--NVDCAIRAGT 143 (300)
T ss_dssp EEEEECHHHHH-HTHHHHHHHHHHHCTTEEEEEEECCCC--CCCT--TCCEEEEESS
T ss_pred EEEEecHHHHH-HHHHHHHHHHHHHCCCcEEEEEeCCCccccccc--CCcEEEEecc
Confidence 33333444554 456789999999999999999886666665544 4887776653
No 64
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=31.89 E-value=1.9e+02 Score=28.89 Aligned_cols=96 Identities=13% Similarity=0.100 Sum_probs=67.5
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEE-EEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHH------HHH
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLI-DVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEY------TDI 194 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~I-dvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~------~~l 194 (408)
..|++|+-.++.|=..|..=+.+.+.+.++++.+ -+++.++...+-+....+..+++....+. .-..++ +..
T Consensus 174 GQr~~IvG~sG~GKTtLl~~Iar~i~~~~~~v~~I~~lIGER~~Ev~~~~~~~~~~vV~atade-p~~~r~~~a~~alt~ 252 (422)
T 3ice_A 174 GQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDE-PASRHVQVAEMVIEK 252 (422)
T ss_dssp TCEEEEECCSSSSHHHHHHHHHHHHHHHCTTSEEEEEEESSCHHHHHHHHTTCSSEEEEECTTS-CHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCChhHHHHHHHHHHhhcCCCeeEEEEEecCChHHHHHHHHHhCeEEEEeCCCC-CHHHHHHHHHHHHHH
Confidence 5799999999999999999889999999999854 55578888887666555555565554332 211111 234
Q ss_pred HHHhhcCCCcEEEEcCCCChHHHHH
Q 015347 195 LGVMKNRYYDMVLSTKLAGLGHAAF 219 (408)
Q Consensus 195 ~~~LR~~~YDlvIdl~~~~~~sall 219 (408)
...+|.+..|++|.+..- .+.+-.
T Consensus 253 AEyfrd~G~dVLil~Dsl-TR~A~A 276 (422)
T 3ice_A 253 AKRLVEHKKDVIILLDSI-TRLARA 276 (422)
T ss_dssp HHHHHHTSCEEEEEEECH-HHHHHH
T ss_pred HHHHHhcCCCEEEEEeCc-hHHHHH
Confidence 455788899999987655 444443
No 65
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=31.65 E-value=32 Score=34.35 Aligned_cols=108 Identities=7% Similarity=-0.086 Sum_probs=67.8
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCc-----hHhhhc----CCCCcEEEEecCCC--CC---CC
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARG-----KQTFEL----NKNVRWANVYDLDD--DW---PE 187 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~-----~~lle~----~P~Vd~Vi~~d~k~--~~---~~ 187 (408)
.++|+++-...-|.+.=...+.+.|.++.|+.+|++++.+.. ...++. .+.|+ +..++... .. ..
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~-~~~lp~~~~~~~~~~~~ 87 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQ-LIDLPEVEPPPQELLKS 87 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEE-EEECCCCCCCCGGGGGS
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCce-EEECCCCCCCcccccCC
Confidence 479999999999999999999999999999999999987764 233322 24453 44444321 10 11
Q ss_pred hHH-HH--------HHHHHhhc---CCCcEEEEcCCCChHHHHHHHHhCCCeEEEe
Q 015347 188 PAE-YT--------DILGVMKN---RYYDMVLSTKLAGLGHAAFLFMTTARDRVSY 231 (408)
Q Consensus 188 ~~~-~~--------~l~~~LR~---~~YDlvIdl~~~~~~sall~~laga~~RIG~ 231 (408)
... +. .+...|++ .++|++|.-....+ ...++...|+|.-+-+
T Consensus 88 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~-~~~vA~~lgiP~v~~~ 142 (463)
T 2acv_A 88 PEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVS-MIDVGNEFGIPSYLFL 142 (463)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGG-GHHHHHHTTCCEEEEE
T ss_pred ccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchh-HHHHHHHcCCCEEEEe
Confidence 100 11 12222444 68999985433323 3466777889854433
No 66
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=31.28 E-value=3.5e+02 Score=26.57 Aligned_cols=41 Identities=5% Similarity=0.062 Sum_probs=37.3
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCC
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASAR 162 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~ 162 (408)
.++|+++-..+-|-+.-...+.+.|.++-+++.|++++.+.
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~ 47 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQ 47 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHH
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCch
Confidence 47999999999999999999999999998899999998764
No 67
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=30.50 E-value=70 Score=32.03 Aligned_cols=104 Identities=7% Similarity=0.026 Sum_probs=62.8
Q ss_pred CccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCC--chHhhhc-----CCCCcEEEEecCCC--CC---CCh
Q 015347 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASAR--GKQTFEL-----NKNVRWANVYDLDD--DW---PEP 188 (408)
Q Consensus 121 ~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~--~~~lle~-----~P~Vd~Vi~~d~k~--~~---~~~ 188 (408)
..++|+++-..+.|++.-...+.+.|.++ +|.+||+++.+. ....++. .+.|+ .+.++... .. ...
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r-~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHL-HGLTVTFVIAGEGPPSKAQRTVLDSLPSSIS-SVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHH-HCCEEEEEECCSSSCC-CHHHHHC-CCTTEE-EEECCCCCCTTSCTTCCH
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhC-CCCEEEEEECCCcchhhhhhhhccccCCCce-EEEcCCCCCCCCCCchhH
Confidence 34799999999999999999999999986 378999998776 3333332 24554 34443210 00 111
Q ss_pred HH------------HHHHHHHh-hcCCC-cEEEEcCCCChHHHHHHHHhCCCe
Q 015347 189 AE------------YTDILGVM-KNRYY-DMVLSTKLAGLGHAAFLFMTTARD 227 (408)
Q Consensus 189 ~~------------~~~l~~~L-R~~~Y-DlvIdl~~~~~~sall~~laga~~ 227 (408)
.. +.++++.+ ...++ |++|.=....+ ...++...|++.
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~-~~~vA~~lgiP~ 134 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTD-AFDVAVEFHVPP 134 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGG-GHHHHHHTTCCE
T ss_pred HHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchh-HHHHHHHcCCCE
Confidence 11 11222222 12489 98886333323 456777788884
No 68
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=30.32 E-value=51 Score=28.87 Aligned_cols=38 Identities=11% Similarity=0.012 Sum_probs=30.6
Q ss_pred ccEEEEEcCCChhH----HHHHHHHHHHHHHHCCCcEEEEEE
Q 015347 122 VRRCCCIISGGVYE----NLLFFPAIQLLKDRYPGVLIDVIA 159 (408)
Q Consensus 122 ~~rILIIr~~~IGD----vILttPvI~aLK~~yP~A~IdvLv 159 (408)
+||||+|.-+--++ ..|+--+++.+++++|+++|+++-
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~d 42 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARRE 42 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 47999998886663 456667899999999999998874
No 69
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=29.81 E-value=1.4e+02 Score=28.51 Aligned_cols=78 Identities=13% Similarity=0.155 Sum_probs=41.9
Q ss_pred ccccCCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHH
Q 015347 116 LKIRGDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDIL 195 (408)
Q Consensus 116 ~~~~~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~ 195 (408)
.-+.+..|||||+-.+.+|- ++++.|.+.+ +|++.... ...+=+..+.+. .+.+|..+ .. .+.
T Consensus 10 ~~~~g~~mkilvlGaG~vG~-----~~~~~L~~~~---~v~~~~~~-~~~~~~~~~~~~-~~~~d~~d----~~---~l~ 72 (365)
T 3abi_A 10 HHIEGRHMKVLILGAGNIGR-----AIAWDLKDEF---DVYIGDVN-NENLEKVKEFAT-PLKVDASN----FD---KLV 72 (365)
T ss_dssp ------CCEEEEECCSHHHH-----HHHHHHTTTS---EEEEEESC-HHHHHHHTTTSE-EEECCTTC----HH---HHH
T ss_pred ccccCCccEEEEECCCHHHH-----HHHHHHhcCC---CeEEEEcC-HHHHHHHhccCC-cEEEecCC----HH---HHH
Confidence 34456679999998877775 4567787654 66655422 222222334443 45566433 12 222
Q ss_pred HHhhcCCCcEEEEcCCC
Q 015347 196 GVMKNRYYDMVLSTKLA 212 (408)
Q Consensus 196 ~~LR~~~YDlvIdl~~~ 212 (408)
..+ .+.|+||++-..
T Consensus 73 ~~~--~~~DvVi~~~p~ 87 (365)
T 3abi_A 73 EVM--KEFELVIGALPG 87 (365)
T ss_dssp HHH--TTCSEEEECCCG
T ss_pred HHH--hCCCEEEEecCC
Confidence 333 368999998655
No 70
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=29.75 E-value=40 Score=30.13 Aligned_cols=46 Identities=11% Similarity=0.083 Sum_probs=37.7
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhc
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFEL 169 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~ 169 (408)
.+||++-.++++|=.=-..-+++.|++. +++|++++++.++.++..
T Consensus 7 ~k~I~lgiTGs~aa~~k~~~ll~~L~~~--g~eV~vv~T~~A~~~i~~ 52 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTYHEVLPQMERLVEL--GAKVTPFVTHTVQTTDTK 52 (201)
T ss_dssp TCEEEEECCSCGGGGGGTHHHHHHHHHT--TCEEEEECSSCSCCTTCC
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHhhC--CCEEEEEEChhHHHHHHH
Confidence 5899999999965332788899999987 899999999988877643
No 71
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=28.82 E-value=73 Score=29.76 Aligned_cols=72 Identities=10% Similarity=-0.031 Sum_probs=49.2
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHhhcCC
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMKNRY 202 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR~~~ 202 (408)
++|.|+ -+++| .+.+++.|++..|+..+-++++... .|+.. +....-.......++.|.+..
T Consensus 23 ~~IGvf-DsG~G----gltv~~~i~~~~P~~~~iy~~D~~~------~Pyg~-------~s~~~i~~~~~~~~~~L~~~g 84 (286)
T 2jfq_A 23 KPIGVI-DSGVG----GLTVAKEIMRQLPNETIYYLGDIGR------CPYGP-------RPGEQVKQYTVEIARKLMEFD 84 (286)
T ss_dssp SCEEEE-ESSST----THHHHHHHHHHCTTCCEEEEECTTT------CCCTT-------SCHHHHHHHHHHHHHHHTTSC
T ss_pred CcEEEE-eCCCC----cHHHHHHHHHHCCCccEEEeccCCC------CCcCC-------CCHHHHHHHHHHHHHHHHHCC
Confidence 368888 67899 6788999999999999888886643 33322 110001223456677788889
Q ss_pred CcEEEEcCCC
Q 015347 203 YDMVLSTKLA 212 (408)
Q Consensus 203 YDlvIdl~~~ 212 (408)
.|+++..=+.
T Consensus 85 ~d~IVIaCNT 94 (286)
T 2jfq_A 85 IKMLVIACNT 94 (286)
T ss_dssp CSEEEECCHH
T ss_pred CCEEEEeCCc
Confidence 9999986544
No 72
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=28.80 E-value=27 Score=31.04 Aligned_cols=43 Identities=12% Similarity=0.025 Sum_probs=36.9
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhh
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTF 167 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~ll 167 (408)
.+||++..++++|-. -..-+++.|++. +++|++++++.++.++
T Consensus 8 ~k~IllgvTGs~aa~-k~~~l~~~L~~~--g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 8 DKKLLIGICGSISSV-GISSYLLYFKSF--FKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GCEEEEEECSCGGGG-GTHHHHHHHTTT--SSEEEEEECHHHHHHS
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHC--CCEEEEEEchhHHHHH
Confidence 579999999999877 567889999875 8999999999888775
No 73
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=28.66 E-value=1.7e+02 Score=28.35 Aligned_cols=85 Identities=8% Similarity=-0.022 Sum_probs=46.7
Q ss_pred HHHhhCCCCC-CeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC-CEEEeCCcc--hHHHHHHHHhcCC-C
Q 015347 301 KYKNAGAEQG-KYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEK--EREGVEDVVGDDA-S 375 (408)
Q Consensus 301 ~l~~~g~~~~-~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~-~vvliggp~--E~e~~~~I~~~~~-~ 375 (408)
...++|+... ..+++..|.-.. .| -.+...+.+..+.+.. .++++|... .++.+++++.... +
T Consensus 280 ~r~~~~~~~~~~~~i~~vGrl~~----------~K--g~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~ 347 (485)
T 1rzu_A 280 VAEHFRIDDDGSPLFCVISRLTW----------QK--GIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGR 347 (485)
T ss_dssp HHHHHTCCCSSSCEEEEESCBST----------TT--THHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTT
T ss_pred HHHhcCCCCCCCeEEEEEccCcc----------cc--CHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCc
Confidence 3445677642 345555554222 12 3456666666665545 677776543 3566666655443 3
Q ss_pred cc-ccC-CHHHHHH-hcccCEEEeC
Q 015347 376 IV-FIT-TPGQLQI-QQPYNLQTRV 397 (408)
Q Consensus 376 ~~-~i~-~~~eLaA-i~~adl~I~n 397 (408)
+. +.. ...++.. ++.||++|.+
T Consensus 348 v~~~~g~~~~~~~~~~~~adv~v~p 372 (485)
T 1rzu_A 348 VGVAIGYNEPLSHLMQAGCDAIIIP 372 (485)
T ss_dssp EEEEESCCHHHHHHHHHHCSEEEEC
T ss_pred EEEecCCCHHHHHHHHhcCCEEEEC
Confidence 32 111 2245567 9999999865
No 74
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=28.11 E-value=1.9e+02 Score=23.41 Aligned_cols=80 Identities=13% Similarity=0.029 Sum_probs=56.1
Q ss_pred EEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCC--chHhhhcC-CCCcEEEEecCCCCCCChHHHHHHHHHhhcCCC
Q 015347 127 CIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASAR--GKQTFELN-KNVRWANVYDLDDDWPEPAEYTDILGVMKNRYY 203 (408)
Q Consensus 127 IIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~--~~~lle~~-P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR~~~Y 203 (408)
+....++|..-+..|+++.|-+.-.+-.|.|+..+. +.+-+... =..++|+.+..++. --..+.+-+.||...|
T Consensus 8 l~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~---~d~lwa~EqaLrsg~~ 84 (119)
T 1ofu_X 8 SLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN---AAALALSCEALRLGRS 84 (119)
T ss_dssp EEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSH---HHHHHHHHHHHHHTCE
T ss_pred eecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCc---HHHHHHHHHHHhcCCc
Confidence 345579999999999999887533455788887554 44555433 35568888875432 2345667788999999
Q ss_pred cEEEEc
Q 015347 204 DMVLST 209 (408)
Q Consensus 204 DlvIdl 209 (408)
..||--
T Consensus 85 ~aVl~w 90 (119)
T 1ofu_X 85 HTVVSW 90 (119)
T ss_dssp EEEEEC
T ss_pred cEEEEC
Confidence 999964
No 75
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=26.98 E-value=2.6e+02 Score=24.03 Aligned_cols=80 Identities=13% Similarity=0.029 Sum_probs=56.9
Q ss_pred EEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCC--chHhhhcC-CCCcEEEEecCCCCCCChHHHHHHHHHhhcCCC
Q 015347 127 CIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASAR--GKQTFELN-KNVRWANVYDLDDDWPEPAEYTDILGVMKNRYY 203 (408)
Q Consensus 127 IIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~--~~~lle~~-P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR~~~Y 203 (408)
+....++|+.-+..|+++.+-+.-.+-.|.|+..+. +++-+... =+.++|+.+..++. --..+.+-+.||...|
T Consensus 50 l~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~---~daLwa~EqALrsG~~ 126 (161)
T 1oft_A 50 SLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN---AAALALSCEALRLGRS 126 (161)
T ss_dssp EEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSST---THHHHHHHHHHHTTCE
T ss_pred ccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCCh---HHHHHHHHHHHhcCCc
Confidence 344579999999999999887533456788887655 45555543 25568888876543 2245677788999999
Q ss_pred cEEEEc
Q 015347 204 DMVLST 209 (408)
Q Consensus 204 DlvIdl 209 (408)
..||.-
T Consensus 127 ~aVl~W 132 (161)
T 1oft_A 127 HTVVSW 132 (161)
T ss_dssp EEEEEC
T ss_pred cEEEEC
Confidence 999964
No 76
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=26.79 E-value=3e+02 Score=25.53 Aligned_cols=77 Identities=14% Similarity=0.087 Sum_probs=47.2
Q ss_pred CccEEEEE-cCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCc------------hHhhhc-CCCCcEEEEecCCCCCC
Q 015347 121 DVRRCCCI-ISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARG------------KQTFEL-NKNVRWANVYDLDDDWP 186 (408)
Q Consensus 121 ~~~rILII-r~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~------------~~lle~-~P~Vd~Vi~~d~k~~~~ 186 (408)
..|+|||. -.++||=.| ++.|.+...+.+|..+.+... ...... ...+ .++..|..+.
T Consensus 9 ~~~~vlVTGatG~IG~~l-----~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~-- 80 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNL-----AFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG-EVIAADINNP-- 80 (362)
T ss_dssp TTCEEEEETTTSHHHHHH-----HHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCS-EEEECCTTCH--
T ss_pred CCCEEEEECCCCHHHHHH-----HHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCc-eEEECCCCCH--
Confidence 46899999 557888654 667777666899999986443 111111 1233 4566665432
Q ss_pred ChHHHHHHHHHhhcCCCcEEEEcCC
Q 015347 187 EPAEYTDILGVMKNRYYDMVLSTKL 211 (408)
Q Consensus 187 ~~~~~~~l~~~LR~~~YDlvIdl~~ 211 (408)
. .+..+...+.|++|++-.
T Consensus 81 --~----~~~~~~~~~~D~vih~A~ 99 (362)
T 3sxp_A 81 --L----DLRRLEKLHFDYLFHQAA 99 (362)
T ss_dssp --H----HHHHHTTSCCSEEEECCC
T ss_pred --H----HHHHhhccCCCEEEECCc
Confidence 2 223335578999998754
No 77
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=25.83 E-value=2.9e+02 Score=25.26 Aligned_cols=76 Identities=7% Similarity=-0.001 Sum_probs=44.2
Q ss_pred ccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHhhcC
Q 015347 122 VRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMKNR 201 (408)
Q Consensus 122 ~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR~~ 201 (408)
.|||||+-.+.. ..+++++++..-..++.++-.....+... ..|+.+..+.-.. .. ..-.++...+++
T Consensus 4 ~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~~~~~~~---~~d~~~~~~~~~~-~~--~~~~l~~~~~~~ 71 (331)
T 2pn1_A 4 KPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSPLASALY---MADQHYIVPKIDE-VE--YIDHLLTLCQDE 71 (331)
T ss_dssp CCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCTTCGGGG---GSSSEEECCCTTS-TT--HHHHHHHHHHHH
T ss_pred cceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCCcchhHH---hhhceecCCCCCC-hh--HHHHHHHHHHHc
Confidence 479999977654 36789999885334554443332222222 4566665552111 11 223455666778
Q ss_pred CCcEEEEc
Q 015347 202 YYDMVLST 209 (408)
Q Consensus 202 ~YDlvIdl 209 (408)
+.|+++..
T Consensus 72 ~~d~vi~~ 79 (331)
T 2pn1_A 72 GVTALLTL 79 (331)
T ss_dssp TCCEEEES
T ss_pred CCCEEEeC
Confidence 99999875
No 78
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=25.77 E-value=1.7e+02 Score=28.36 Aligned_cols=85 Identities=12% Similarity=-0.020 Sum_probs=47.2
Q ss_pred HHHhhCCCC--CCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC-CEEEeCCcc--hHHHHHHHHhcCC-
Q 015347 301 KYKNAGAEQ--GKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEK--EREGVEDVVGDDA- 374 (408)
Q Consensus 301 ~l~~~g~~~--~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~-~vvliggp~--E~e~~~~I~~~~~- 374 (408)
..+++++.. +..+++..|.-... | -.+...+.+..+.+.. .++++|... ..+.+++++....
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~----------K--g~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~ 347 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQ----------K--GLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPG 347 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGG----------G--CHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTT
T ss_pred HHHHcCCCCCCCCeEEEEeccCccc----------c--CHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCC
Confidence 344556653 44555555532221 2 3456777777776544 666666533 3556666655443
Q ss_pred Ccc-ccC-CHHHHHH-hcccCEEEeC
Q 015347 375 SIV-FIT-TPGQLQI-QQPYNLQTRV 397 (408)
Q Consensus 375 ~~~-~i~-~~~eLaA-i~~adl~I~n 397 (408)
++. +.. ...++.. ++.||++|.+
T Consensus 348 ~v~~~~g~~~~~~~~~~~~adv~v~p 373 (485)
T 2qzs_A 348 QVGVQIGYHEAFSHRIMGGADVILVP 373 (485)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEEC
T ss_pred cEEEeCCCCHHHHHHHHHhCCEEEEC
Confidence 232 111 2355667 9999999865
No 79
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=25.38 E-value=2.5e+02 Score=24.79 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=19.6
Q ss_pred cEEEEEcC------CChhHHHHHHHHHHHHHHHCCCcEEEEE
Q 015347 123 RRCCCIIS------GGVYENLLFFPAIQLLKDRYPGVLIDVI 158 (408)
Q Consensus 123 ~rILIIr~------~~IGDvILttPvI~aLK~~yP~A~IdvL 158 (408)
+||++|.. +.-...--..-+.+++++..++.++..+
T Consensus 136 ~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~ 177 (304)
T 3gbv_A 136 REIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILEL 177 (304)
T ss_dssp SEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEe
Confidence 67777652 1222333444666677776666655544
No 80
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=25.20 E-value=32 Score=27.15 Aligned_cols=54 Identities=15% Similarity=0.146 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHCCC-cEEEEEECCCchHhhhcCCCCcEEEEecCCCC--CCChHHHH
Q 015347 137 LLFFPAIQLLKDRYPG-VLIDVIASARGKQTFELNKNVRWANVYDLDDD--WPEPAEYT 192 (408)
Q Consensus 137 ILttPvI~aLK~~yP~-A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~--~~~~~~~~ 192 (408)
.-+.=+-+.|.++||+ +.|.+-..+.....|+- .||..++|+++.. |+...+.+
T Consensus 17 ~ra~~laqeLl~~Fp~~l~V~~~l~p~~~G~FEV--~vng~lV~SKk~~ggFP~~~el~ 73 (96)
T 2npb_A 17 PKYLQLKEKLEHEFPGCLDICGEGTPQVTGFFEV--TVAGKLVHSKKRGDGYVDTESKF 73 (96)
T ss_dssp HHHHHHHHHHHHHSBTTEEEEECCCSSCCSCCEE--EETTEEEEETTTTCCSSCSHHHH
T ss_pred HHHHHHHHHHHHhCCcceEEEEEEcCCCCcEEEE--EECCEEEEEEecCCCCCChHHHH
Confidence 3445567899999999 66666666665566655 4466778887643 55555443
No 81
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=24.94 E-value=1.3e+02 Score=28.15 Aligned_cols=75 Identities=9% Similarity=0.096 Sum_probs=42.5
Q ss_pred CCeEEEEcCCCCchhhccCCCCCCCCC--CHHHHHHHHHHHhhCC-CEEEeCCcchHHHHHHHHhcCCCccccCCHHHHH
Q 015347 310 GKYIVIHGIESDSKASMQSRGDTDSLL--PIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLQ 386 (408)
Q Consensus 310 ~~~Ivihpgas~~~~~~~~~g~~~K~W--P~e~waeLa~~L~~~~-~vvliggp~E~e~~~~I~~~~~~~~~i~~~~eLa 386 (408)
++.|++..|+... .+.+ +.+.+.++++.+.+.. ++++.++..+.+.++.+ ..++.+ .-. ...
T Consensus 210 ~~~v~v~~Gs~~~----------~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~---~~~v~~-~~~-~~~ 274 (384)
T 2p6p_A 210 RQRVLVTSGSRVA----------KESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAE---VPQARV-GWT-PLD 274 (384)
T ss_dssp SCEEEEECSSSSS----------CCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHHH---CTTSEE-ECC-CHH
T ss_pred CCEEEEECCCCCc----------cccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCC---CCceEE-cCC-CHH
Confidence 4677777775442 1113 4466778888887655 66666665444433322 223332 111 235
Q ss_pred H-hcccCEEEeCCC
Q 015347 387 I-QQPYNLQTRVKS 399 (408)
Q Consensus 387 A-i~~adl~I~nDS 399 (408)
. +..||++|+.-.
T Consensus 275 ~~l~~~d~~v~~~G 288 (384)
T 2p6p_A 275 VVAPTCDLLVHHAG 288 (384)
T ss_dssp HHGGGCSEEEECSC
T ss_pred HHHhhCCEEEeCCc
Confidence 5 899999999743
No 82
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=24.09 E-value=16 Score=35.13 Aligned_cols=86 Identities=12% Similarity=0.035 Sum_probs=47.6
Q ss_pred HHHhhCCCCCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC---CEEEeCCcch-----HHHHHHHHhc
Q 015347 301 KYKNAGAEQGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR---PLFVIPHEKE-----REGVEDVVGD 372 (408)
Q Consensus 301 ~l~~~g~~~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~---~vvliggp~E-----~e~~~~I~~~ 372 (408)
...+.++..+..+++..|.-.. .| -.+...+.+..+.++. .++++|...+ ++.++++...
T Consensus 221 ~r~~~~~~~~~~~i~~vGrl~~----------~K--g~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~ 288 (416)
T 2x6q_A 221 ILERFDVDPEKPIITQVSRFDP----------WK--GIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRK 288 (416)
T ss_dssp HHHHTTCCTTSCEEEEECCCCT----------TS--CHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCcEEEEEecccc----------cc--CHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHH
Confidence 3455677655555666554332 23 3466777777776543 5666665432 3445555443
Q ss_pred C---CCcccc---CC--HHHHHH-hcccCEEEeCC
Q 015347 373 D---ASIVFI---TT--PGQLQI-QQPYNLQTRVK 398 (408)
Q Consensus 373 ~---~~~~~i---~~--~~eLaA-i~~adl~I~nD 398 (408)
. .++.+. .. ..++.. ++.||++|..-
T Consensus 289 ~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps 323 (416)
T 2x6q_A 289 IGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS 323 (416)
T ss_dssp HTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECC
T ss_pred hCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECC
Confidence 2 233322 11 247888 99999998764
No 83
>3ho7_A OXYR; beta-alpha-barrels, DNA-binding, transcription, transcriptio regulation; 1.58A {Porphyromonas gingivalis}
Probab=23.42 E-value=1.2e+02 Score=25.38 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=26.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEEC
Q 015347 124 RCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIAS 160 (408)
Q Consensus 124 rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~ 160 (408)
+|=|-....++.. +..+++..++++||+++|.+...
T Consensus 12 ~l~Ig~~~~~~~~-~l~~~l~~~~~~~P~v~i~~~~~ 47 (232)
T 3ho7_A 12 RLNIAVLPTIAPY-LLPRVFPIWKKELAGLEIHVSEM 47 (232)
T ss_dssp EEEEEECTTTHHH-HHHHHHHHHHHHSTTEEEEEEEC
T ss_pred eEEEEeccccchh-hhHHHHHHHHHHCCCcEEEEEeC
Confidence 3444444555555 66799999999999999998753
No 84
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=23.29 E-value=1e+02 Score=28.89 Aligned_cols=74 Identities=1% Similarity=-0.188 Sum_probs=43.3
Q ss_pred CCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC-CEEEeCCcc-hHHHHHHHHhcCCCccccCCHHHHH
Q 015347 309 QGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEK-EREGVEDVVGDDASIVFITTPGQLQ 386 (408)
Q Consensus 309 ~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~-~vvliggp~-E~e~~~~I~~~~~~~~~i~~~~eLa 386 (408)
+++.|++..|+... ...+.+.++++.+.+.. .++++.|+. +.+.+++ ...++.+.....+.
T Consensus 230 ~~~~v~v~~G~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~v~~~~~~~~~- 292 (402)
T 3ia7_A 230 DAPVLLVSLGNQFN-------------EHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGP---LPPNVEAHQWIPFH- 292 (402)
T ss_dssp TCCEEEEECCSCSS-------------CCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCS---CCTTEEEESCCCHH-
T ss_pred CCCEEEEECCCCCc-------------chHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCC---CCCcEEEecCCCHH-
Confidence 45678887776543 24577888888887655 566655543 3332221 12233322222344
Q ss_pred H-hcccCEEEeCCC
Q 015347 387 I-QQPYNLQTRVKS 399 (408)
Q Consensus 387 A-i~~adl~I~nDS 399 (408)
. ++.||++|+.-.
T Consensus 293 ~ll~~ad~~v~~~G 306 (402)
T 3ia7_A 293 SVLAHARACLTHGT 306 (402)
T ss_dssp HHHTTEEEEEECCC
T ss_pred HHHhhCCEEEECCC
Confidence 6 999999998754
No 85
>3hhg_A Transcriptional regulator, LYSR family; transcription factor, structur genomics, oxford protein production facility, OPPF; 3.20A {Neisseria meningitidis serogroup B}
Probab=22.79 E-value=1.7e+02 Score=25.89 Aligned_cols=54 Identities=17% Similarity=0.165 Sum_probs=37.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEec
Q 015347 124 RCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYD 180 (408)
Q Consensus 124 rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d 180 (408)
+|-|-....++.. +..+++..++++||+++|.+........+.+ ..+|=++.+.
T Consensus 94 ~l~I~~~~~~~~~-~l~~~l~~f~~~~P~v~i~l~~~~~~~~l~~--~~~Dl~i~~~ 147 (306)
T 3hhg_A 94 VLSVDSAMPMVLH-LLAPLAAKFNERYPHIRLSLVSSEGYINLIE--RKVDIALRAG 147 (306)
T ss_dssp EEEEEBCHHHHHH-THHHHHHHHHHHCTTEEEEEECCSSSHHHHT--TSSSCEEESC
T ss_pred cEEEEccHHHHHH-HHHHHHHHHHHHCCCeEEEEEeccchhhHhh--cCccEEEEeC
Confidence 3434344455543 5678999999999999999996666656554 3577666654
No 86
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=22.66 E-value=1.6e+02 Score=27.57 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=49.3
Q ss_pred CccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEEC-CCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHhh
Q 015347 121 DVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIAS-ARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVMK 199 (408)
Q Consensus 121 ~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~-~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~LR 199 (408)
...++||+-.+++|=. +++.+|..+|+++|..++. +....+++.. ..++++.+... -+++.+++
T Consensus 170 ~g~~VlV~GaG~vG~~-----aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~vi~~~~~---------~~~~~~~~ 234 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVY-----TIQILKALMKNITIVGISRSKKHRDFALEL-GADYVSEMKDA---------ESLINKLT 234 (344)
T ss_dssp SSCEEEEECCSHHHHH-----HHHHHHHHCTTCEEEEECSCHHHHHHHHHH-TCSEEECHHHH---------HHHHHHHH
T ss_pred CCCEEEEECCCHHHHH-----HHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-CCCEEeccccc---------hHHHHHhh
Confidence 4578999877666643 4677788889999777663 3344555543 35677643210 12344555
Q ss_pred cC-CCcEEEEcCCC
Q 015347 200 NR-YYDMVLSTKLA 212 (408)
Q Consensus 200 ~~-~YDlvIdl~~~ 212 (408)
.. .+|++||..+.
T Consensus 235 ~g~g~D~vid~~g~ 248 (344)
T 2h6e_A 235 DGLGASIAIDLVGT 248 (344)
T ss_dssp TTCCEEEEEESSCC
T ss_pred cCCCccEEEECCCC
Confidence 44 79999999877
No 87
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=22.22 E-value=1.8e+02 Score=25.82 Aligned_cols=84 Identities=14% Similarity=0.213 Sum_probs=48.8
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECC-CchHhh--hcCCCCcEEEEecCCCCCCChHHH-HHHHHHh
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASA-RGKQTF--ELNKNVRWANVYDLDDDWPEPAEY-TDILGVM 198 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~-~~~~ll--e~~P~Vd~Vi~~d~k~~~~~~~~~-~~l~~~L 198 (408)
+||+++-.+. |+ .+.+++++|++..-+++|..|+.. ....+. ...-+|. ++.++.++ +.....+ -.++..|
T Consensus 2 ~rI~vl~SG~-g~--~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp-~~~~~~~~-~~~r~~~~~~~~~~l 76 (216)
T 2ywr_A 2 LKIGVLVSGR-GS--NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVE-CKVIQRKE-FPSKKEFEERMALEL 76 (216)
T ss_dssp EEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCC-EEECCGGG-SSSHHHHHHHHHHHH
T ss_pred CEEEEEEeCC-cH--HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCC-EEEeCccc-ccchhhhhHHHHHHH
Confidence 6887774432 44 366889998876434688766643 333332 2233554 44444432 1222222 3467788
Q ss_pred hcCCCcEEEEcCC
Q 015347 199 KNRYYDMVLSTKL 211 (408)
Q Consensus 199 R~~~YDlvIdl~~ 211 (408)
++.+.|++|....
T Consensus 77 ~~~~~Dliv~a~y 89 (216)
T 2ywr_A 77 KKKGVELVVLAGF 89 (216)
T ss_dssp HHTTCCEEEESSC
T ss_pred HhcCCCEEEEeCc
Confidence 9999999998744
No 88
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=22.06 E-value=1.4e+02 Score=26.66 Aligned_cols=40 Identities=13% Similarity=0.055 Sum_probs=29.6
Q ss_pred CCccEEEEEcCCCh-----h-HHHHHHHHHHHHHHHCCCc-EEEEEE
Q 015347 120 GDVRRCCCIISGGV-----Y-ENLLFFPAIQLLKDRYPGV-LIDVIA 159 (408)
Q Consensus 120 ~~~~rILIIr~~~I-----G-DvILttPvI~aLK~~yP~A-~IdvLv 159 (408)
|.+||||+|.-+-- + -..|+--+++.+++++|++ +|+++-
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~id 48 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQIN 48 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 56799999977644 1 2345557788999999999 998874
No 89
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=21.90 E-value=4.4e+02 Score=24.31 Aligned_cols=74 Identities=15% Similarity=0.132 Sum_probs=45.1
Q ss_pred CCccEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHh--hhcCCCCcEEEEecCCCCCCChHHHHHHHHH
Q 015347 120 GDVRRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQT--FELNKNVRWANVYDLDDDWPEPAEYTDILGV 197 (408)
Q Consensus 120 ~~~~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~l--le~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~ 197 (408)
++.+||.||-.+.||-. .++.|++..|+++|..+++...... +...-.+..+ ++ ... ..
T Consensus 6 ~~~~~v~iiG~G~ig~~-----~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~--~~------~~~------~~ 66 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGER-----HARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETT--YT------NYK------DM 66 (346)
T ss_dssp CCCEEEEEECCSTTHHH-----HHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEE--ES------CHH------HH
T ss_pred CCcceEEEEcCCHHHHH-----HHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcc--cC------CHH------HH
Confidence 45689999999999964 3456665678999888876543322 2222123322 21 111 12
Q ss_pred hhcCCCcEEEEcCCC
Q 015347 198 MKNRYYDMVLSTKLA 212 (408)
Q Consensus 198 LR~~~YDlvIdl~~~ 212 (408)
|.....|+|+.....
T Consensus 67 l~~~~~D~V~i~tp~ 81 (346)
T 3cea_A 67 IDTENIDAIFIVAPT 81 (346)
T ss_dssp HTTSCCSEEEECSCG
T ss_pred hcCCCCCEEEEeCCh
Confidence 344578999987665
No 90
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=21.58 E-value=1.3e+02 Score=26.32 Aligned_cols=38 Identities=8% Similarity=0.071 Sum_probs=28.7
Q ss_pred ccEEEEEcCCCh-h----HHHHHHHHHHHHHHHCCCcEEEEEE
Q 015347 122 VRRCCCIISGGV-Y----ENLLFFPAIQLLKDRYPGVLIDVIA 159 (408)
Q Consensus 122 ~~rILIIr~~~I-G----DvILttPvI~aLK~~yP~A~IdvLv 159 (408)
+||||+|.-+-- | -..|+--+++.+++++|+++|+++-
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~d 46 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELD 46 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 689999977644 2 2345557789999999999999874
No 91
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=21.21 E-value=34 Score=28.34 Aligned_cols=22 Identities=5% Similarity=-0.019 Sum_probs=17.8
Q ss_pred HHHHH-hcccCEEEeCCChHHHHhcC
Q 015347 383 GQLQI-QQPYNLQTRVKSPALHCSAL 407 (408)
Q Consensus 383 ~eLaA-i~~adl~I~nDSGpmHLAaa 407 (408)
+.+++ +..||++|+|-| |+|.|
T Consensus 29 ~~m~~~V~~A~vvi~NPt---h~AVA 51 (123)
T 2jli_A 29 RNMRENVKRSSVVVANPT---HIAIG 51 (123)
T ss_dssp HHHHHHHHTCSEEEECCC---SEEEE
T ss_pred hHHhcCCCcCcEEEECCC---ceEEE
Confidence 45667 999999999966 88765
No 92
>3oxn_A Putative transcriptional regulator, LYSR family; structural genomics, PSI-2, protein structure initiative; 2.70A {Vibrio parahaemolyticus}
Probab=21.18 E-value=1.6e+02 Score=24.91 Aligned_cols=55 Identities=7% Similarity=0.028 Sum_probs=34.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhh--cCCCCcEEEEec
Q 015347 124 RCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE--LNKNVRWANVYD 180 (408)
Q Consensus 124 rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle--~~P~Vd~Vi~~d 180 (408)
+|=|-....++. .+..++++.++++||+++|.+....... +++ ..-.+|=++.+.
T Consensus 20 ~l~Ig~~~~~~~-~~l~~~l~~f~~~~P~i~l~~~~~~~~~-~~~~l~~g~~Dl~i~~~ 76 (241)
T 3oxn_A 20 TFTIATTDYAMQ-TILPFALPRIYQEAPNVSFNFLPLQHDR-LSDQLTYEGADLAICRP 76 (241)
T ss_dssp EEEEEECSHHHH-HTHHHHHHHHHHHCTTCEEEEEECCGGG-HHHHHHTSCCSEEEECC
T ss_pred eEEEEechHHHH-HHHHHHHHHHHHHCCCCEEEEEECCccc-HHHHHHcCCCCEEEecC
Confidence 333434444444 5667999999999999999998754432 211 124566555543
No 93
>2lyx_A Uncharacterized protein YQZG; PF13028, DUF3889, structural genomics, unknown function; NMR {Bacillus subtilis subsp}
Probab=20.82 E-value=48 Score=25.77 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=13.3
Q ss_pred HHHHHHHHCCCcEEE
Q 015347 142 AIQLLKDRYPGVLID 156 (408)
Q Consensus 142 vI~aLK~~yP~A~Id 156 (408)
+++.++++||+|+|.
T Consensus 19 A~~~~k~~YP~A~I~ 33 (87)
T 2lyx_A 19 AVKEAKKRYPLAQVL 33 (87)
T ss_dssp HHHHHHHTCTTCEEC
T ss_pred HHHHHHHHCCCCeEE
Confidence 578999999999985
No 94
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=20.71 E-value=5.2e+02 Score=25.41 Aligned_cols=89 Identities=10% Similarity=0.042 Sum_probs=0.0
Q ss_pred cccccccCCccEEEEEcCCCh--hHHHHHHHHHHHHHHHCCCcEEEEEEC-----CCchHhhhcCCCCcEEEEecCCCCC
Q 015347 113 SLPLKIRGDVRRCCCIISGGV--YENLLFFPAIQLLKDRYPGVLIDVIAS-----ARGKQTFELNKNVRWANVYDLDDDW 185 (408)
Q Consensus 113 ~~~~~~~~~~~rILIIr~~~I--GDvILttPvI~aLK~~yP~A~IdvLv~-----~~~~~lle~~P~Vd~Vi~~d~k~~~ 185 (408)
+......+..+||+++....- |=.-+...+++.|...-.+.+|++++. .....-++... .+..+.....
T Consensus 196 ~~~~~~~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~- 271 (568)
T 2vsy_A 196 APTRVRSKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS---TLHDVTALGH- 271 (568)
T ss_dssp CCCCCCSSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS---EEEECTTCCH-
T ss_pred CCCCCCCCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC---eEEECCCCCH-
Q ss_pred CChHHHHHHHHHhhcCCCcEEEEcCC
Q 015347 186 PEPAEYTDILGVMKNRYYDMVLSTKL 211 (408)
Q Consensus 186 ~~~~~~~~l~~~LR~~~YDlvIdl~~ 211 (408)
..+.+.+|+.++|++++...
T Consensus 272 ------~~l~~~i~~~~~Div~~~~~ 291 (568)
T 2vsy_A 272 ------LATAKHIRHHGIDLLFDLRG 291 (568)
T ss_dssp ------HHHHHHHHHTTCSEEEECSS
T ss_pred ------HHHHHHHHhCCCCEEEECCC
No 95
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=20.68 E-value=2.1e+02 Score=26.24 Aligned_cols=71 Identities=11% Similarity=0.044 Sum_probs=47.7
Q ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCC-hHHHHHHHHHhhcC
Q 015347 123 RRCCCIISGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPE-PAEYTDILGVMKNR 201 (408)
Q Consensus 123 ~rILIIr~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~-~~~~~~l~~~LR~~ 201 (408)
++|.|+- +++|. +.+++.|++..|+..+.++++.. +.|+.. +.. .. .......++.|.+.
T Consensus 13 ~~IGv~D-sG~Gg----ltv~~~i~~~~P~~~~iy~~D~~------~~Pyg~-------~s~-~~i~~~~~~~~~~L~~~ 73 (273)
T 2oho_A 13 RPIGFLD-SGVGG----LTVVCELIRQLPHEKIVYIGDSA------RAPYGP-------RPK-KQIKEYTWELVNFLLTQ 73 (273)
T ss_dssp CCEEEEE-SSSTT----HHHHHHHHHHCTTCCEEEEECGG------GCCCTT-------SCH-HHHHHHHHHHHHHHHTT
T ss_pred CcEEEEe-CCCcH----HHHHHHHHHHCCCCCEEEEeCCC------CCCCCC-------CCH-HHHHHHHHHHHHHHHHC
Confidence 3577664 46775 55999999999999999988764 344432 110 11 12345667778888
Q ss_pred CCcEEEEcCCC
Q 015347 202 YYDMVLSTKLA 212 (408)
Q Consensus 202 ~YDlvIdl~~~ 212 (408)
..|+++..=+.
T Consensus 74 g~d~iviaCNT 84 (273)
T 2oho_A 74 NVKMIVFACNT 84 (273)
T ss_dssp TCSEEEECCHH
T ss_pred CCCEEEEeCch
Confidence 99999986444
No 96
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=20.32 E-value=47 Score=31.69 Aligned_cols=76 Identities=7% Similarity=-0.041 Sum_probs=43.0
Q ss_pred CCCeEEEEcCCCCchhhccCCCCCCCCCCHHHHHHHHHHHhhCC-CEEEeCCcchHHHHHHHHhcCCCccccCCHHHHHH
Q 015347 309 QGKYIVIHGIESDSKASMQSRGDTDSLLPIQVWAEIANGLREFR-PLFVIPHEKEREGVEDVVGDDASIVFITTPGQLQI 387 (408)
Q Consensus 309 ~~~~Ivihpgas~~~~~~~~~g~~~K~WP~e~waeLa~~L~~~~-~vvliggp~E~e~~~~I~~~~~~~~~i~~~~eLaA 387 (408)
+++.|++..|+.... + -+.+...++++.|.+.. +++++++..+.+.++ ....++.+.... .+..
T Consensus 231 ~~~~v~v~~G~~~~~---~--------~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~---~~~~~v~~~~~~-~~~~ 295 (398)
T 3oti_A 231 ARPEVAITMGTIELQ---A--------FGIGAVEPIIAAAGEVDADFVLALGDLDISPLG---TLPRNVRAVGWT-PLHT 295 (398)
T ss_dssp SSCEEEECCTTTHHH---H--------HCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGC---SCCTTEEEESSC-CHHH
T ss_pred CCCEEEEEcCCCccc---c--------CcHHHHHHHHHHHHcCCCEEEEEECCcChhhhc---cCCCcEEEEccC-CHHH
Confidence 346777766654321 0 04456778888887666 677777665543322 112233322211 3556
Q ss_pred -hcccCEEEeCCC
Q 015347 388 -QQPYNLQTRVKS 399 (408)
Q Consensus 388 -i~~adl~I~nDS 399 (408)
+..||++|+.-.
T Consensus 296 ll~~ad~~v~~~G 308 (398)
T 3oti_A 296 LLRTCTAVVHHGG 308 (398)
T ss_dssp HHTTCSEEEECCC
T ss_pred HHhhCCEEEECCC
Confidence 889999998644
No 97
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=20.15 E-value=5.4e+02 Score=24.13 Aligned_cols=78 Identities=8% Similarity=-0.041 Sum_probs=52.6
Q ss_pred CCccEEEEEcC-CChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhhcCCCCcEEEEecCCCCCCChHHHHHHHHHh
Q 015347 120 GDVRRCCCIIS-GGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFELNKNVRWANVYDLDDDWPEPAEYTDILGVM 198 (408)
Q Consensus 120 ~~~~rILIIr~-~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle~~P~Vd~Vi~~d~k~~~~~~~~~~~l~~~L 198 (408)
....++||+-- +++|=.+ ++.+|.. +++|..++++....+++..- .++++.+.. . . +...++.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a-----~qla~~~--Ga~Vi~~~~~~~~~~~~~lG-a~~vi~~~~--~--~---~~~~v~~~ 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVT-----MQMLRLS--GYIPIATCSPHNFDLAKSRG-AEEVFDYRA--P--N---LAQTIRTY 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHHH-----HHHHHHT--TCEEEEEECGGGHHHHHHTT-CSEEEETTS--T--T---HHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHH-----HHHHHHC--CCEEEEEeCHHHHHHHHHcC-CcEEEECCC--c--h---HHHHHHHH
Confidence 45578999887 6788543 4555543 77887778777777777665 577876532 1 1 23445555
Q ss_pred hcCCCcEEEEcCCC
Q 015347 199 KNRYYDMVLSTKLA 212 (408)
Q Consensus 199 R~~~YDlvIdl~~~ 212 (408)
...++|++||..+.
T Consensus 228 t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 228 TKNNLRYALDCITN 241 (371)
T ss_dssp TTTCCCEEEESSCS
T ss_pred ccCCccEEEECCCc
Confidence 55679999999876
No 98
>2ql3_A Probable transcriptional regulator, LYSR family P; APC7314, rhodococcus RHA1, structural genomics, PSI-2; HET: MSE; 2.05A {Rhodococcus SP}
Probab=20.04 E-value=96 Score=25.66 Aligned_cols=48 Identities=10% Similarity=0.132 Sum_probs=30.3
Q ss_pred CCChhHHHHHHHHHHHHHHHCCCcEEEEEECCCchHhhh--cCCCCcEEEEe
Q 015347 130 SGGVYENLLFFPAIQLLKDRYPGVLIDVIASARGKQTFE--LNKNVRWANVY 179 (408)
Q Consensus 130 ~~~IGDvILttPvI~aLK~~yP~A~IdvLv~~~~~~lle--~~P~Vd~Vi~~ 179 (408)
...++. .+..+++..++++||+++|++...... .+.+ ..-.+|=.+..
T Consensus 12 ~~~~~~-~~l~~~l~~f~~~~P~i~i~l~~~~~~-~l~~~l~~g~~Dl~i~~ 61 (209)
T 2ql3_A 12 YPALGP-TILPSMLYAFTAEYPRASVEFREDTQN-RLRTQLEGGELDVAIVY 61 (209)
T ss_dssp CGGGTT-TTHHHHHHHHHHHCTTEEEEEEECCHH-HHHHHHHTTSCSEEEEE
T ss_pred chhhhh-hhHHHHHHHHHHHCCCceEEEEECcHH-HHHHHHHcCCccEEEEe
Confidence 344554 345689999999999999998875432 2221 13345645544
Done!