Query 015348
Match_columns 408
No_of_seqs 433 out of 1272
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 05:28:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015348.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015348hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03092 BT1: BT1 family; Int 100.0 3.1E-38 6.6E-43 291.1 36.3 392 2-401 11-418 (433)
2 TIGR00788 fbt folate/biopterin 100.0 2.1E-37 4.6E-42 289.5 34.9 386 2-397 47-447 (468)
3 COG2814 AraJ Arabinose efflux 100.0 5.1E-34 1.1E-38 251.0 27.5 324 5-367 37-365 (394)
4 PRK03545 putative arabinose tr 100.0 7.1E-34 1.5E-38 262.1 28.1 324 5-367 33-359 (390)
5 TIGR00792 gph sugar (Glycoside 100.0 4.7E-32 1E-36 254.1 32.2 376 3-400 22-425 (437)
6 PRK10489 enterobactin exporter 100.0 2.5E-32 5.5E-37 254.0 26.0 335 3-366 40-377 (417)
7 TIGR00900 2A0121 H+ Antiporter 100.0 2.6E-32 5.6E-37 249.8 25.1 338 3-365 22-365 (365)
8 COG2271 UhpC Sugar phosphate p 100.0 3.4E-33 7.3E-38 242.4 17.8 335 5-367 53-413 (448)
9 PRK11551 putative 3-hydroxyphe 100.0 4.5E-32 9.9E-37 251.7 24.7 330 6-365 40-372 (406)
10 PRK11902 ampG muropeptide tran 100.0 3.1E-31 6.7E-36 245.3 29.4 370 2-400 21-394 (402)
11 PRK11663 regulatory protein Uh 100.0 1.1E-31 2.5E-36 250.4 25.0 334 6-366 48-402 (434)
12 PRK09705 cynX putative cyanate 100.0 4.8E-31 1E-35 242.9 28.6 322 5-366 33-358 (393)
13 TIGR00899 2A0120 sugar efflux 100.0 3.1E-31 6.8E-36 243.6 26.8 329 3-366 20-352 (375)
14 TIGR00890 2A0111 Oxalate/Forma 100.0 4E-31 8.8E-36 242.9 26.5 332 4-366 26-360 (377)
15 PRK10213 nepI ribonucleoside t 100.0 7.2E-31 1.6E-35 241.6 27.7 322 6-366 45-369 (394)
16 TIGR00891 2A0112 putative sial 100.0 3.6E-31 7.9E-36 245.7 25.2 333 5-365 36-392 (405)
17 PRK09556 uhpT sugar phosphate 100.0 8.5E-32 1.8E-36 253.6 21.0 334 6-362 54-411 (467)
18 TIGR00893 2A0114 d-galactonate 100.0 1.9E-31 4.1E-36 246.8 22.7 338 5-365 18-375 (399)
19 PF05977 MFS_3: Transmembrane 100.0 8.4E-31 1.8E-35 245.0 27.0 338 2-367 32-373 (524)
20 TIGR00903 2A0129 major facilit 100.0 6.5E-31 1.4E-35 238.4 25.4 319 5-361 15-340 (368)
21 PRK12307 putative sialic acid 100.0 6.8E-31 1.5E-35 245.4 24.3 335 4-366 41-386 (426)
22 PRK15402 multidrug efflux syst 100.0 2.9E-30 6.2E-35 239.5 28.1 331 7-365 39-372 (406)
23 PRK11646 multidrug resistance 100.0 1.1E-30 2.4E-35 240.8 25.2 325 3-365 33-361 (400)
24 PRK10504 putative transporter; 100.0 6.4E-31 1.4E-35 248.6 23.6 335 7-367 36-419 (471)
25 PRK11010 ampG muropeptide tran 100.0 5.9E-30 1.3E-34 241.3 28.8 342 4-366 36-381 (491)
26 PRK14995 methyl viologen resis 100.0 2.4E-30 5.2E-35 245.1 26.2 333 6-363 31-413 (495)
27 PRK11195 lysophospholipid tran 100.0 5.2E-30 1.1E-34 235.8 27.5 325 8-367 30-359 (393)
28 PRK10091 MFS transport protein 100.0 5.5E-30 1.2E-34 235.3 27.6 320 6-364 28-351 (382)
29 PF07690 MFS_1: Major Facilita 100.0 7.9E-32 1.7E-36 245.4 15.2 324 5-354 21-352 (352)
30 PRK05122 major facilitator sup 100.0 3.1E-30 6.7E-35 238.8 25.7 324 3-366 38-367 (399)
31 COG2211 MelB Na+/melibiose sym 100.0 1.7E-29 3.6E-34 227.1 28.8 348 3-370 35-403 (467)
32 PRK09669 putative symporter Ya 100.0 3.6E-29 7.9E-34 234.4 32.0 375 3-400 32-433 (444)
33 PRK11273 glpT sn-glycerol-3-ph 100.0 9.1E-30 2E-34 238.9 27.6 337 6-366 54-413 (452)
34 TIGR00897 2A0118 polyol permea 100.0 2.1E-29 4.6E-34 233.0 28.7 339 4-366 37-379 (402)
35 PRK12382 putative transporter; 100.0 3.6E-29 7.9E-34 231.1 29.0 324 3-366 38-367 (392)
36 TIGR02332 HpaX 4-hydroxyphenyl 100.0 9.1E-30 2E-34 235.7 23.3 331 6-365 33-397 (412)
37 PRK10054 putative transporter; 100.0 1.9E-29 4.1E-34 232.2 25.0 328 3-366 30-362 (395)
38 TIGR00881 2A0104 phosphoglycer 100.0 3.1E-30 6.8E-35 237.2 19.1 339 5-367 19-376 (379)
39 TIGR00710 efflux_Bcr_CflA drug 100.0 7.7E-29 1.7E-33 228.6 27.9 326 6-360 30-358 (385)
40 PRK10473 multidrug efflux syst 100.0 7.2E-29 1.6E-33 229.1 27.5 324 6-367 28-353 (392)
41 PRK03699 putative transporter; 100.0 2.5E-29 5.5E-34 231.9 24.4 326 6-368 32-360 (394)
42 PRK10429 melibiose:sodium symp 100.0 4.3E-28 9.2E-33 228.5 33.0 348 3-368 29-398 (473)
43 PRK15011 sugar efflux transpor 100.0 5E-29 1.1E-33 229.8 26.0 349 3-396 38-391 (393)
44 PRK11102 bicyclomycin/multidru 100.0 8.7E-29 1.9E-33 227.5 27.6 322 7-356 17-342 (377)
45 TIGR01299 synapt_SV2 synaptic 100.0 3.5E-29 7.6E-34 241.7 25.8 358 6-401 192-739 (742)
46 PRK15403 multidrug efflux syst 100.0 2.2E-28 4.7E-33 226.4 29.9 330 7-363 42-373 (413)
47 TIGR00901 2A0125 AmpG-related 100.0 4.7E-29 1E-33 227.4 25.0 326 7-347 14-355 (356)
48 TIGR00902 2A0127 phenyl propri 100.0 4.8E-29 1E-33 229.0 25.2 322 4-365 28-357 (382)
49 PRK10642 proline/glycine betai 100.0 5.1E-29 1.1E-33 236.0 25.8 314 23-365 64-406 (490)
50 PRK09874 drug efflux system pr 100.0 3.6E-29 7.7E-34 232.6 24.0 327 4-366 38-376 (408)
51 TIGR00711 efflux_EmrB drug res 100.0 8.2E-30 1.8E-34 242.3 19.7 333 6-363 27-410 (485)
52 PRK09952 shikimate transporter 100.0 7.5E-29 1.6E-33 231.4 25.7 334 6-365 48-408 (438)
53 PRK10406 alpha-ketoglutarate t 100.0 1.3E-28 2.8E-33 229.8 25.9 333 5-365 46-400 (432)
54 PRK03893 putative sialic acid 100.0 5E-29 1.1E-33 237.4 23.3 335 5-366 44-431 (496)
55 PRK11652 emrD multidrug resist 100.0 4.9E-28 1.1E-32 223.7 27.2 324 6-362 33-359 (394)
56 PRK03633 putative MFS family t 100.0 2.9E-28 6.3E-33 223.9 24.9 317 7-366 32-350 (381)
57 TIGR00892 2A0113 monocarboxyla 100.0 3.1E-29 6.6E-34 234.9 18.5 328 7-365 45-397 (455)
58 PRK11128 putative 3-phenylprop 100.0 3.7E-28 8E-33 223.2 25.2 324 4-366 28-358 (382)
59 PRK10077 xylE D-xylose transpo 100.0 4.3E-28 9.2E-33 230.1 26.4 331 10-361 49-424 (479)
60 PRK11043 putative transporter; 100.0 7E-28 1.5E-32 223.2 26.9 323 7-362 32-356 (401)
61 PRK09528 lacY galactoside perm 100.0 4.2E-29 9E-34 232.6 18.5 338 3-366 33-381 (420)
62 TIGR00898 2A0119 cation transp 100.0 4.3E-28 9.3E-33 231.4 25.7 352 7-402 115-501 (505)
63 TIGR00879 SP MFS transporter, 100.0 2.8E-28 6.1E-33 231.4 24.3 339 13-367 68-449 (481)
64 PF13347 MFS_2: MFS/sugar tran 100.0 1.1E-28 2.4E-33 230.0 21.1 347 3-370 24-391 (428)
65 TIGR00712 glpT glycerol-3-phos 100.0 6.4E-28 1.4E-32 225.6 25.5 338 6-366 52-411 (438)
66 PRK15075 citrate-proton sympor 100.0 3.9E-28 8.5E-33 226.7 22.6 333 5-366 39-397 (434)
67 cd06174 MFS The Major Facilita 100.0 2.9E-28 6.2E-33 221.7 21.0 303 7-366 25-330 (352)
68 TIGR00894 2A0114euk Na(+)-depe 100.0 1.7E-28 3.8E-33 231.5 20.0 332 10-363 70-422 (465)
69 TIGR00895 2A0115 benzoate tran 100.0 2.1E-28 4.6E-33 226.6 19.3 325 6-360 42-397 (398)
70 TIGR00889 2A0110 nucleoside tr 100.0 1.8E-27 3.8E-32 220.4 24.9 337 3-366 25-374 (418)
71 TIGR02718 sider_RhtX_FptX side 100.0 1.4E-26 3E-31 213.6 29.6 342 3-366 24-369 (390)
72 PRK10133 L-fucose transporter; 100.0 4.7E-27 1E-31 218.6 26.1 325 6-365 51-409 (438)
73 PRK11462 putative transporter; 100.0 1.9E-26 4.2E-31 215.7 30.3 342 3-368 32-392 (460)
74 TIGR00883 2A0106 metabolite-pr 100.0 6.9E-28 1.5E-32 222.8 20.0 333 5-365 17-377 (394)
75 PRK09848 glucuronide transport 100.0 3.9E-26 8.4E-31 214.3 30.3 343 3-368 31-393 (448)
76 TIGR00887 2A0109 phosphate:H+ 100.0 1.1E-26 2.3E-31 220.9 26.3 372 11-405 51-498 (502)
77 TIGR00896 CynX cyanate transpo 100.0 9.3E-27 2E-31 212.1 23.8 322 5-366 24-351 (355)
78 TIGR00882 2A0105 oligosacchari 100.0 2.5E-27 5.4E-32 219.0 20.1 336 3-366 25-373 (396)
79 PRK06814 acylglycerophosphoeth 100.0 1.5E-26 3.3E-31 240.8 28.3 337 9-363 44-396 (1140)
80 PLN00028 nitrate transmembrane 100.0 3E-27 6.4E-32 222.7 20.0 244 6-268 61-318 (476)
81 KOG3764 Vesicular amine transp 100.0 1.7E-28 3.7E-33 210.6 9.2 328 10-367 100-433 (464)
82 PRK15034 nitrate/nitrite trans 99.9 7.5E-26 1.6E-30 206.8 23.8 329 6-366 59-431 (462)
83 PRK08633 2-acyl-glycerophospho 99.9 1.1E-25 2.4E-30 235.1 27.9 329 5-362 34-383 (1146)
84 TIGR00885 fucP L-fucose:H+ sym 99.9 1.7E-25 3.7E-30 206.4 25.9 329 4-365 26-383 (410)
85 KOG0569 Permease of the major 99.9 5.5E-25 1.2E-29 200.0 27.5 369 9-402 47-461 (485)
86 COG2223 NarK Nitrate/nitrite t 99.9 3.2E-27 7E-32 205.7 12.1 336 3-365 36-377 (417)
87 TIGR00886 2A0108 nitrite extru 99.9 1.9E-26 4.1E-31 211.1 17.7 318 5-349 26-365 (366)
88 PF03825 Nuc_H_symport: Nucleo 99.9 4.7E-25 1E-29 200.7 25.9 333 3-368 25-369 (400)
89 TIGR00924 yjdL_sub1_fam amino 99.9 1E-25 2.3E-30 211.4 22.4 345 3-363 33-443 (475)
90 PRK10207 dipeptide/tripeptide 99.9 2.5E-25 5.4E-30 208.9 23.6 341 3-360 37-438 (489)
91 KOG1330 Sugar transporter/spin 99.9 7.9E-29 1.7E-33 217.3 -0.5 341 5-364 57-413 (493)
92 PF11700 ATG22: Vacuole efflux 99.9 4.8E-24 1E-28 197.6 30.7 370 17-402 71-474 (477)
93 KOG2532 Permease of the major 99.9 6.6E-26 1.4E-30 208.5 18.2 354 8-393 65-444 (466)
94 TIGR01301 GPH_sucrose GPH fami 99.9 7.5E-24 1.6E-28 195.0 29.3 383 4-400 28-476 (477)
95 KOG2615 Permease of the major 99.9 7.1E-25 1.5E-29 187.4 17.7 329 13-372 65-423 (451)
96 PF03209 PUCC: PUCC protein; 99.9 1.7E-22 3.6E-27 177.0 30.2 373 6-398 5-400 (403)
97 PRK09584 tppB putative tripept 99.9 5.5E-23 1.2E-27 194.2 24.9 336 3-362 44-439 (500)
98 COG0738 FucP Fucose permease [ 99.9 8.2E-23 1.8E-27 177.1 20.5 331 3-367 35-388 (422)
99 PF01306 LacY_symp: LacY proto 99.9 5.2E-24 1.1E-28 190.1 13.4 336 4-367 31-379 (412)
100 KOG2533 Permease of the major 99.9 7.7E-24 1.7E-28 195.3 14.1 241 7-265 72-336 (495)
101 COG2270 Permeases of the major 99.9 1.9E-22 4.2E-27 176.0 21.2 366 4-401 39-434 (438)
102 KOG0254 Predicted transporter 99.9 1.2E-21 2.5E-26 186.5 25.4 361 16-403 89-491 (513)
103 KOG2504 Monocarboxylate transp 99.9 2.1E-22 4.5E-27 187.8 17.5 331 5-366 70-453 (509)
104 COG2807 CynX Cyanate permease 99.9 3.4E-21 7.4E-26 164.6 20.0 322 6-366 37-362 (395)
105 TIGR00806 rfc RFC reduced fola 99.9 7.5E-21 1.6E-25 170.8 19.1 316 5-349 50-401 (511)
106 PRK15462 dipeptide/tripeptide 99.9 4.2E-20 9.1E-25 171.0 23.8 341 3-364 32-437 (493)
107 KOG0255 Synaptic vesicle trans 99.9 5E-19 1.1E-23 169.4 26.7 322 9-362 111-467 (521)
108 TIGR00805 oat sodium-independe 99.8 2E-21 4.2E-26 187.6 7.8 262 6-281 58-412 (633)
109 PF06609 TRI12: Fungal trichot 99.8 2.3E-19 5.1E-24 167.7 21.3 327 5-360 68-464 (599)
110 PF00083 Sugar_tr: Sugar (and 99.8 2.1E-25 4.5E-30 210.0 -19.5 366 15-405 45-446 (451)
111 TIGR01272 gluP glucose/galacto 99.8 1.1E-18 2.5E-23 154.6 21.9 264 76-366 9-293 (310)
112 KOG4686 Predicted sugar transp 99.8 2.2E-20 4.7E-25 153.6 8.9 362 2-398 65-445 (459)
113 COG3104 PTR2 Dipeptide/tripept 99.8 3.2E-18 7E-23 153.2 17.0 340 4-358 45-451 (498)
114 KOG0252 Inorganic phosphate tr 99.8 1.6E-19 3.4E-24 158.6 7.6 364 13-402 81-504 (538)
115 KOG0253 Synaptic vesicle trans 99.8 1.4E-17 3.1E-22 142.2 17.1 323 5-357 102-490 (528)
116 PTZ00207 hypothetical protein; 99.7 1.6E-15 3.6E-20 143.0 23.7 156 4-176 50-209 (591)
117 KOG2816 Predicted transporter 99.7 3.2E-15 6.9E-20 137.5 23.3 304 28-364 75-393 (463)
118 KOG2563 Permease of the major 99.6 1.4E-13 3E-18 121.7 16.0 342 3-367 67-425 (480)
119 KOG3574 Acetyl-CoA transporter 99.5 2.7E-13 5.8E-18 116.6 14.4 349 2-367 52-435 (510)
120 KOG2325 Predicted transporter/ 99.5 4.5E-13 9.7E-18 121.8 15.3 341 10-367 65-454 (488)
121 PF05631 DUF791: Protein of un 99.5 1.7E-11 3.6E-16 106.7 23.3 254 7-280 60-321 (354)
122 TIGR00880 2_A_01_02 Multidrug 99.5 4E-13 8.6E-18 104.8 10.3 125 32-174 15-140 (141)
123 PF13000 Acatn: Acetyl-coenzym 99.4 1.8E-11 4E-16 109.9 20.4 353 2-365 22-469 (544)
124 PRK15011 sugar efflux transpor 99.4 2.4E-12 5.2E-17 118.9 15.2 153 3-174 239-392 (393)
125 PF06963 FPN1: Ferroportin1 (F 99.4 6.7E-11 1.5E-15 107.7 23.7 337 2-356 24-411 (432)
126 PF03137 OATP: Organic Anion T 99.4 9.1E-15 2E-19 138.0 -1.6 344 6-363 28-514 (539)
127 PRK10054 putative transporter; 99.4 9.8E-13 2.1E-17 121.4 11.2 153 202-366 7-160 (395)
128 TIGR00899 2A0120 sugar efflux 99.4 7.9E-12 1.7E-16 114.9 14.7 153 3-174 222-375 (375)
129 KOG3762 Predicted transporter 99.4 1.7E-12 3.7E-17 117.1 9.2 168 190-369 359-528 (618)
130 TIGR00889 2A0110 nucleoside tr 99.4 8E-12 1.7E-16 116.1 13.4 149 15-177 250-407 (418)
131 PRK11195 lysophospholipid tran 99.4 7.6E-12 1.7E-16 115.4 13.1 148 201-363 2-150 (393)
132 TIGR00710 efflux_Bcr_CflA drug 99.4 4.2E-12 9.2E-17 117.1 11.4 128 228-366 30-158 (385)
133 PRK10642 proline/glycine betai 99.4 2.9E-11 6.2E-16 115.0 16.5 162 3-180 273-437 (490)
134 PRK12382 putative transporter; 99.3 8.5E-12 1.8E-16 115.4 12.3 162 202-366 15-177 (392)
135 PRK11663 regulatory protein Uh 99.3 1.8E-11 4E-16 114.5 13.7 127 229-366 49-176 (434)
136 PRK10213 nepI ribonucleoside t 99.3 1.5E-11 3.3E-16 113.5 12.5 127 229-366 46-173 (394)
137 PRK10489 enterobactin exporter 99.3 2.5E-11 5.5E-16 113.2 13.9 156 4-177 247-404 (417)
138 PRK10091 MFS transport protein 99.3 1.4E-11 3.1E-16 113.4 11.8 128 228-366 28-156 (382)
139 PRK11646 multidrug resistance 99.3 9.5E-12 2.1E-16 115.1 10.5 134 220-365 28-162 (400)
140 PRK05122 major facilitator sup 99.3 2.8E-11 6.1E-16 112.2 13.7 149 10-178 245-394 (399)
141 PRK09528 lacY galactoside perm 99.3 1.7E-11 3.7E-16 114.4 11.9 147 12-176 258-407 (420)
142 cd06174 MFS The Major Facilita 99.3 2.3E-11 5E-16 110.5 11.9 150 4-171 199-350 (352)
143 PF07690 MFS_1: Major Facilita 99.3 6.8E-12 1.5E-16 114.1 8.4 128 228-366 22-150 (352)
144 PRK09874 drug efflux system pr 99.3 5.4E-11 1.2E-15 110.6 13.9 136 18-171 260-396 (408)
145 PRK09556 uhpT sugar phosphate 99.3 3.7E-11 8E-16 113.6 12.7 153 3-171 281-447 (467)
146 TIGR02332 HpaX 4-hydroxyphenyl 99.3 3.9E-11 8.4E-16 111.5 12.4 125 228-363 33-158 (412)
147 TIGR01299 synapt_SV2 synaptic 99.3 4.9E-11 1.1E-15 116.5 13.3 137 22-177 601-738 (742)
148 TIGR00900 2A0121 H+ Antiporter 99.3 1.3E-11 2.8E-16 112.9 8.9 130 231-366 27-157 (365)
149 PRK14995 methyl viologen resis 99.3 2.8E-11 6.1E-16 115.2 11.4 128 229-367 32-161 (495)
150 TIGR00891 2A0112 putative sial 99.3 3E-11 6.5E-16 112.2 10.8 126 229-365 38-164 (405)
151 PRK03545 putative arabinose tr 99.3 1.1E-10 2.4E-15 107.8 14.5 148 4-171 229-378 (390)
152 KOG0637 Sucrose transporter an 99.3 4.7E-12 1E-16 112.2 4.7 131 5-144 57-201 (498)
153 TIGR00886 2A0108 nitrite extru 99.2 5.1E-11 1.1E-15 109.1 11.6 133 221-364 20-153 (366)
154 TIGR00893 2A0114 d-galactonate 99.2 1E-10 2.2E-15 108.1 13.5 127 229-366 20-147 (399)
155 PRK03699 putative transporter; 99.2 7.4E-11 1.6E-15 109.1 12.3 152 3-173 228-380 (394)
156 TIGR00902 2A0127 phenyl propri 99.2 1.8E-10 3.8E-15 106.1 14.5 146 4-170 229-376 (382)
157 PRK10473 multidrug efflux syst 99.2 7.8E-11 1.7E-15 109.0 12.1 126 229-365 29-155 (392)
158 PRK11043 putative transporter; 99.2 8.2E-11 1.8E-15 109.2 12.2 127 229-366 32-159 (401)
159 PRK11102 bicyclomycin/multidru 99.2 1.5E-10 3.2E-15 106.5 13.7 126 230-366 18-144 (377)
160 COG2271 UhpC Sugar phosphate p 99.2 4E-11 8.6E-16 105.7 9.2 131 226-367 52-185 (448)
161 TIGR00895 2A0115 benzoate tran 99.2 1.8E-11 3.9E-16 113.3 7.4 130 227-367 41-171 (398)
162 TIGR00903 2A0129 major facilit 99.2 1.8E-10 4E-15 104.9 13.8 128 229-367 17-144 (368)
163 COG2814 AraJ Arabinose efflux 99.2 1.2E-10 2.6E-15 103.7 12.1 150 229-396 39-189 (394)
164 PF01770 Folate_carrier: Reduc 99.2 1.4E-09 3.1E-14 97.4 18.9 315 4-346 27-385 (412)
165 PRK11010 ampG muropeptide tran 99.2 1.3E-09 2.7E-14 103.5 19.6 158 4-175 246-405 (491)
166 TIGR00924 yjdL_sub1_fam amino 99.2 4.7E-11 1E-15 112.6 9.6 140 216-366 24-170 (475)
167 PRK03633 putative MFS family t 99.2 2.5E-10 5.5E-15 105.1 14.2 149 4-174 224-373 (381)
168 TIGR00711 efflux_EmrB drug res 99.2 4.4E-11 9.5E-16 113.9 9.3 129 228-367 27-156 (485)
169 TIGR00897 2A0118 polyol permea 99.2 1.8E-10 3.8E-15 106.9 12.9 154 204-366 15-171 (402)
170 PRK11551 putative 3-hydroxyphe 99.2 2.5E-10 5.5E-15 106.1 13.5 150 5-173 245-396 (406)
171 TIGR00890 2A0111 Oxalate/Forma 99.2 1.3E-10 2.9E-15 106.7 10.8 141 9-165 233-374 (377)
172 PRK15402 multidrug efflux syst 99.2 4.4E-10 9.6E-15 104.4 14.2 127 229-366 39-166 (406)
173 PRK15034 nitrate/nitrite trans 99.2 3.2E-10 7E-15 104.5 12.7 154 202-361 34-187 (462)
174 PRK03893 putative sialic acid 99.2 1.4E-10 3E-15 110.8 10.7 146 4-165 299-445 (496)
175 PRK09952 shikimate transporter 99.2 9.1E-10 2E-14 103.2 15.5 158 4-175 274-435 (438)
176 PRK10504 putative transporter; 99.2 4.9E-10 1.1E-14 106.3 13.6 135 3-152 284-419 (471)
177 PLN00028 nitrate transmembrane 99.2 1.8E-10 3.9E-15 109.0 10.6 125 228-363 61-185 (476)
178 PRK15403 multidrug efflux syst 99.2 4.3E-10 9.4E-15 104.5 12.7 127 229-366 42-169 (413)
179 TIGR00712 glpT glycerol-3-phos 99.2 8.2E-10 1.8E-14 103.6 14.7 127 228-362 52-179 (438)
180 PRK11652 emrD multidrug resist 99.1 3.5E-10 7.6E-15 104.7 11.9 127 229-366 34-161 (394)
181 PRK10207 dipeptide/tripeptide 99.1 1.9E-10 4E-15 108.7 9.9 135 222-366 34-172 (489)
182 PF05977 MFS_3: Transmembrane 99.1 6.6E-10 1.4E-14 104.9 13.3 150 3-170 241-391 (524)
183 PRK12307 putative sialic acid 99.1 1.6E-10 3.5E-15 108.1 9.0 128 228-366 43-171 (426)
184 KOG3626 Organic anion transpor 99.1 1.1E-10 2.4E-15 110.9 7.3 248 6-267 122-458 (735)
185 TIGR00883 2A0106 metabolite-pr 99.1 5E-10 1.1E-14 103.5 11.7 145 3-163 242-391 (394)
186 TIGR00892 2A0113 monocarboxyla 99.1 9.3E-11 2E-15 110.3 6.8 146 5-167 266-415 (455)
187 KOG2615 Permease of the major 99.1 1.4E-10 3E-15 100.6 6.5 117 235-362 65-181 (451)
188 PRK11273 glpT sn-glycerol-3-ph 99.1 1.1E-09 2.3E-14 103.2 13.2 153 3-171 276-433 (452)
189 PRK15462 dipeptide/tripeptide 99.1 4.5E-10 9.7E-15 104.7 10.1 136 221-366 28-167 (493)
190 TIGR00881 2A0104 phosphoglycer 99.1 1.2E-10 2.7E-15 106.9 5.9 128 228-366 20-149 (379)
191 TIGR00885 fucP L-fucose:H+ sym 99.1 1.4E-09 3E-14 100.8 12.7 129 227-363 27-156 (410)
192 PRK09705 cynX putative cyanate 99.1 1.6E-09 3.5E-14 100.1 13.2 155 4-177 229-386 (393)
193 TIGR00805 oat sodium-independe 99.1 3.9E-10 8.4E-15 109.6 9.1 138 227-364 57-235 (633)
194 KOG3764 Vesicular amine transp 99.1 6.6E-10 1.4E-14 97.0 9.3 126 233-369 101-228 (464)
195 PF11700 ATG22: Vacuole efflux 99.1 3.2E-09 6.9E-14 99.2 14.6 161 4-178 305-473 (477)
196 TIGR00792 gph sugar (Glycoside 99.1 1.9E-09 4.2E-14 101.2 12.8 137 5-152 247-384 (437)
197 PRK11902 ampG muropeptide tran 99.1 4.9E-09 1.1E-13 97.2 15.1 154 5-175 234-392 (402)
198 TIGR00894 2A0114euk Na(+)-depe 99.0 4E-09 8.6E-14 99.9 14.5 127 232-367 70-198 (465)
199 PRK09584 tppB putative tripept 99.0 1.2E-09 2.6E-14 103.8 10.5 158 199-366 17-179 (500)
200 PRK10077 xylE D-xylose transpo 99.0 2.8E-09 6E-14 101.4 12.9 166 233-399 50-218 (479)
201 PRK11128 putative 3-phenylprop 99.0 7.2E-09 1.6E-13 95.5 14.2 142 5-167 230-373 (382)
202 TIGR00879 SP MFS transporter, 99.0 1.6E-09 3.4E-14 102.9 10.2 155 8-176 311-474 (481)
203 TIGR00806 rfc RFC reduced fola 99.0 2E-09 4.4E-14 97.8 10.1 127 228-366 51-178 (511)
204 PRK10133 L-fucose transporter; 99.0 3.3E-09 7E-14 99.3 11.5 127 227-361 50-177 (438)
205 TIGR02718 sider_RhtX_FptX side 99.0 8.5E-09 1.8E-13 95.3 14.2 151 4-168 232-386 (390)
206 PRK08633 2-acyl-glycerophospho 99.0 2.1E-09 4.7E-14 113.2 11.3 119 237-363 46-165 (1146)
207 TIGR00882 2A0105 oligosacchari 99.0 7.2E-09 1.6E-13 96.0 13.3 148 4-169 239-391 (396)
208 TIGR00880 2_A_01_02 Multidrug 99.0 2.4E-09 5.1E-14 83.3 8.4 109 246-365 6-115 (141)
209 PRK09848 glucuronide transport 99.0 3.8E-09 8.3E-14 99.5 11.4 139 4-151 252-391 (448)
210 PRK06814 acylglycerophosphoeth 99.0 2.3E-09 5E-14 112.7 10.5 121 238-366 52-173 (1140)
211 PRK10406 alpha-ketoglutarate t 99.0 2.3E-08 5E-13 93.7 15.4 156 4-175 267-426 (432)
212 PRK15075 citrate-proton sympor 98.9 1.7E-08 3.6E-13 94.7 14.1 135 3-152 261-398 (434)
213 KOG3098 Uncharacterized conser 98.9 1.6E-07 3.6E-12 85.8 19.9 306 32-357 67-408 (461)
214 TIGR00887 2A0109 phosphate:H+ 98.9 1.4E-08 3E-13 97.0 13.6 125 234-363 52-177 (502)
215 PF06813 Nodulin-like: Nodulin 98.9 5.7E-08 1.2E-12 82.0 14.9 158 4-176 25-185 (250)
216 KOG4686 Predicted sugar transp 98.9 1.5E-08 3.2E-13 84.6 11.0 149 5-173 289-443 (459)
217 TIGR00898 2A0119 cation transp 98.9 1.2E-08 2.6E-13 97.7 12.4 124 228-362 114-241 (505)
218 COG2223 NarK Nitrate/nitrite t 98.9 4.7E-09 1E-13 92.9 8.3 128 229-365 40-167 (417)
219 TIGR00901 2A0125 AmpG-related 98.9 4.3E-08 9.4E-13 89.4 15.1 127 230-366 15-148 (356)
220 KOG1330 Sugar transporter/spin 98.9 3.2E-10 6.9E-15 101.1 0.8 123 232-365 62-185 (493)
221 COG2270 Permeases of the major 98.9 1.3E-08 2.7E-13 90.3 10.7 153 6-176 278-432 (438)
222 PF02487 CLN3: CLN3 protein; 98.9 5.4E-07 1.2E-11 81.1 19.6 304 21-361 64-395 (402)
223 TIGR00769 AAA ADP/ATP carrier 98.8 9.6E-07 2.1E-11 81.9 21.3 256 7-280 29-345 (472)
224 TIGR00926 2A1704 Peptide:H+ sy 98.8 6.2E-08 1.3E-12 93.8 14.0 158 3-170 10-179 (654)
225 TIGR00896 CynX cyanate transpo 98.8 4.8E-08 1E-12 89.1 12.6 125 228-365 25-150 (355)
226 KOG4332 Predicted sugar transp 98.8 4.3E-07 9.3E-12 75.4 16.5 306 5-342 61-385 (454)
227 PRK09669 putative symporter Ya 98.8 8.9E-08 1.9E-12 90.1 13.0 137 5-151 254-391 (444)
228 KOG2532 Permease of the major 98.8 4.1E-08 8.8E-13 91.3 9.9 131 230-369 65-197 (466)
229 KOG2504 Monocarboxylate transp 98.7 9E-08 2E-12 90.2 11.3 149 9-173 326-476 (509)
230 TIGR01301 GPH_sucrose GPH fami 98.7 1.3E-07 2.9E-12 88.0 12.0 137 230-366 31-183 (477)
231 TIGR01272 gluP glucose/galacto 98.7 3.3E-07 7.2E-12 81.5 12.7 137 4-161 164-303 (310)
232 PF13347 MFS_2: MFS/sugar tran 98.6 1E-07 2.3E-12 89.2 8.3 139 3-151 248-387 (428)
233 PF03825 Nuc_H_symport: Nucleo 98.6 8.8E-07 1.9E-11 81.3 14.1 134 4-155 231-371 (400)
234 COG0738 FucP Fucose permease [ 98.6 2.3E-07 5E-12 81.9 9.2 146 210-363 20-166 (422)
235 PRK10429 melibiose:sodium symp 98.6 2.7E-07 5.9E-12 87.5 9.5 138 223-365 27-171 (473)
236 TIGR00788 fbt folate/biopterin 98.5 3.6E-07 7.8E-12 86.2 9.2 155 6-174 278-447 (468)
237 KOG0569 Permease of the major 98.5 1.5E-06 3.2E-11 80.4 12.8 157 9-180 298-462 (485)
238 PRK11462 putative transporter; 98.5 7.9E-07 1.7E-11 83.8 10.8 139 223-366 30-175 (460)
239 PF01306 LacY_symp: LacY proto 98.5 4.8E-07 1E-11 81.9 8.8 147 14-178 257-406 (412)
240 PTZ00207 hypothetical protein; 98.5 5.8E-07 1.3E-11 85.7 9.7 126 229-361 53-180 (591)
241 COG2211 MelB Na+/melibiose sym 98.5 1.6E-06 3.4E-11 79.5 10.8 140 3-151 259-399 (467)
242 PF05631 DUF791: Protein of un 98.4 3.6E-05 7.9E-10 67.7 18.1 124 231-366 62-192 (354)
243 PF06609 TRI12: Fungal trichot 98.4 1.5E-06 3.3E-11 82.5 10.0 121 228-360 69-189 (599)
244 KOG2533 Permease of the major 98.4 2.7E-06 5.9E-11 79.6 10.2 158 229-399 72-231 (495)
245 KOG0255 Synaptic vesicle trans 98.3 2.8E-06 6.2E-11 81.7 10.4 120 231-362 111-231 (521)
246 COG0477 ProP Permeases of the 98.3 1.7E-05 3.6E-10 70.4 14.2 142 9-165 30-177 (338)
247 PF00854 PTR2: POT family; In 98.3 2.9E-06 6.4E-11 77.8 9.4 115 51-171 2-121 (372)
248 KOG2325 Predicted transporter/ 98.3 1.5E-05 3.3E-10 73.4 13.1 151 205-362 37-190 (488)
249 KOG0254 Predicted transporter 98.3 5.5E-06 1.2E-10 79.4 10.6 112 238-361 89-201 (513)
250 KOG3762 Predicted transporter 98.3 1.7E-06 3.7E-11 79.1 6.5 144 9-170 399-544 (618)
251 COG3104 PTR2 Dipeptide/tripept 98.2 1.3E-06 2.8E-11 79.6 4.9 147 233-396 56-206 (498)
252 KOG3810 Micronutrient transpor 98.2 8.6E-06 1.9E-10 70.4 9.0 298 37-365 64-387 (433)
253 KOG1237 H+/oligopeptide sympor 98.2 0.0002 4.4E-09 68.5 19.2 160 3-169 60-241 (571)
254 COG2807 CynX Cyanate permease 98.2 1.4E-05 3.1E-10 69.8 10.3 145 9-170 236-382 (395)
255 KOG0253 Synaptic vesicle trans 98.1 4.6E-06 9.9E-11 72.8 5.8 125 33-177 399-523 (528)
256 PF06813 Nodulin-like: Nodulin 98.1 3.3E-05 7.1E-10 65.5 9.9 129 227-361 26-155 (250)
257 KOG0252 Inorganic phosphate tr 98.1 7.4E-06 1.6E-10 73.6 6.1 160 235-399 81-249 (538)
258 PF00083 Sugar_tr: Sugar (and 98.0 1.2E-07 2.5E-12 89.6 -6.6 114 236-360 44-161 (451)
259 PF03209 PUCC: PUCC protein; 97.9 0.00034 7.3E-09 62.8 13.8 149 9-171 237-396 (403)
260 PF03219 TLC: TLC ATP/ADP tran 97.8 0.0016 3.4E-08 61.2 17.4 250 14-281 56-362 (491)
261 PF07672 MFS_Mycoplasma: Mycop 97.8 0.00021 4.5E-09 59.8 10.0 233 119-357 3-262 (267)
262 PF12832 MFS_1_like: MFS_1 lik 97.6 3.7E-05 7.9E-10 52.2 2.0 50 3-58 23-73 (77)
263 KOG2816 Predicted transporter 97.6 0.00065 1.4E-08 63.4 10.6 134 246-400 70-204 (463)
264 PF12832 MFS_1_like: MFS_1 lik 97.4 0.00025 5.3E-09 48.1 4.1 61 215-276 13-73 (77)
265 PF05978 UNC-93: Ion channel r 97.4 0.0011 2.4E-08 51.8 8.2 95 32-145 54-148 (156)
266 KOG2563 Permease of the major 97.4 0.0016 3.4E-08 59.0 9.7 126 233-364 75-203 (480)
267 PF03137 OATP: Organic Anion T 97.3 2.7E-05 5.9E-10 74.3 -1.6 169 228-396 28-250 (539)
268 KOG2601 Iron transporter [Inor 97.3 0.0096 2.1E-07 52.6 13.1 153 2-165 49-218 (503)
269 TIGR00769 AAA ADP/ATP carrier 97.2 0.024 5.3E-07 53.1 16.7 128 236-363 41-191 (472)
270 PF06779 DUF1228: Protein of u 97.2 0.00059 1.3E-08 46.7 4.1 63 4-71 15-78 (85)
271 COG3202 ATP/ADP translocase [E 97.2 0.11 2.4E-06 48.1 19.6 258 7-281 49-365 (509)
272 KOG3880 Predicted small molecu 97.2 0.00032 6.9E-09 59.9 3.0 126 27-175 73-202 (409)
273 PF05978 UNC-93: Ion channel r 97.2 0.0076 1.7E-07 47.2 10.5 105 244-360 43-148 (156)
274 TIGR00926 2A1704 Peptide:H+ sy 96.8 0.011 2.4E-07 57.9 11.0 157 231-391 16-177 (654)
275 KOG3626 Organic anion transpor 96.7 0.0023 5E-08 62.1 5.2 173 228-400 122-347 (735)
276 PF03092 BT1: BT1 family; Int 96.7 0.017 3.6E-07 54.2 10.4 135 226-368 13-155 (433)
277 TIGR00939 2a57 Equilibrative N 96.3 0.92 2E-05 42.5 22.5 115 240-357 309-428 (437)
278 PF03219 TLC: TLC ATP/ADP tran 96.0 0.49 1.1E-05 44.8 16.1 127 236-362 56-205 (491)
279 COG0477 ProP Permeases of the 96.0 0.14 3.1E-06 44.8 12.3 117 238-363 39-158 (338)
280 KOG4332 Predicted sugar transp 95.8 0.23 4.9E-06 42.3 11.6 134 223-368 57-198 (454)
281 KOG3098 Uncharacterized conser 95.5 0.17 3.7E-06 47.1 10.7 119 12-142 274-408 (461)
282 PF01770 Folate_carrier: Reduc 95.4 0.58 1.3E-05 42.9 13.7 130 225-365 26-157 (412)
283 COG3202 ATP/ADP translocase [E 94.3 1.2 2.5E-05 41.6 12.4 130 235-364 58-211 (509)
284 PF06779 DUF1228: Protein of u 94.2 0.049 1.1E-06 37.4 2.7 60 225-284 14-73 (85)
285 PRK03612 spermidine synthase; 93.6 1.6 3.5E-05 41.9 12.8 144 7-166 41-190 (521)
286 PF00854 PTR2: POT family; In 93.4 0.5 1.1E-05 43.4 8.8 82 304-393 35-120 (372)
287 KOG0637 Sucrose transporter an 93.2 0.026 5.6E-07 51.5 0.1 129 230-358 59-200 (498)
288 PRK03612 spermidine synthase; 93.0 0.5 1.1E-05 45.4 8.5 131 233-367 45-176 (521)
289 KOG1479 Nucleoside transporter 90.7 14 0.00029 34.1 18.4 30 76-105 116-145 (406)
290 PF06963 FPN1: Ferroportin1 (F 90.2 2.5 5.5E-05 39.4 9.5 123 6-143 284-413 (432)
291 PF02487 CLN3: CLN3 protein; 88.9 3.8 8.3E-05 37.7 9.4 61 76-145 334-394 (402)
292 KOG3574 Acetyl-CoA transporter 87.8 4.4 9.5E-05 36.8 8.7 48 224-272 52-102 (510)
293 KOG3097 Predicted membrane pro 86.1 1.3 2.7E-05 39.1 4.4 103 32-144 75-179 (390)
294 COG2836 Uncharacterized conser 77.1 28 0.00061 28.9 8.8 44 235-278 161-207 (232)
295 KOG4830 Predicted sugar transp 75.6 2.1 4.6E-05 36.4 2.2 59 199-257 198-256 (412)
296 PF07672 MFS_Mycoplasma: Mycop 72.9 43 0.00093 28.8 9.2 54 34-91 160-218 (267)
297 TIGR01666 YCCS hypothetical me 67.4 34 0.00073 34.4 8.7 63 30-96 38-100 (704)
298 TIGR01667 YCCS_YHJK integral m 64.1 30 0.00065 34.8 7.7 64 29-96 37-100 (701)
299 TIGR00939 2a57 Equilibrative N 62.3 58 0.0013 30.7 8.9 35 242-276 49-83 (437)
300 PF03596 Cad: Cadmium resistan 60.5 92 0.002 25.4 12.4 30 138-167 42-71 (191)
301 COG5336 Uncharacterized protei 60.3 62 0.0013 23.3 6.7 35 332-366 37-71 (116)
302 PF12805 FUSC-like: FUSC-like 59.5 78 0.0017 27.7 8.8 39 55-96 4-42 (284)
303 PF01733 Nucleoside_tran: Nucl 57.8 3.9 8.5E-05 36.4 0.4 111 243-356 187-303 (309)
304 KOG3810 Micronutrient transpor 48.3 75 0.0016 28.9 6.6 118 30-168 286-416 (433)
305 PF11345 DUF3147: Protein of u 48.2 1.1E+02 0.0023 22.4 9.3 75 86-168 27-102 (108)
306 PF11151 DUF2929: Protein of u 46.5 73 0.0016 20.0 6.0 45 131-175 11-55 (57)
307 PF02694 UPF0060: Uncharacteri 45.8 10 0.00022 27.1 0.9 53 13-70 51-104 (107)
308 COG1288 Predicted membrane pro 43.5 1.2E+02 0.0026 28.3 7.2 33 146-178 213-247 (481)
309 KOG3880 Predicted small molecu 42.1 1.2E+02 0.0026 27.1 6.8 69 61-142 330-398 (409)
310 PRK10697 DNA-binding transcrip 40.8 93 0.002 23.1 5.2 13 166-178 57-69 (118)
311 PF11368 DUF3169: Protein of u 40.2 1.9E+02 0.0041 24.7 8.0 24 121-144 9-32 (248)
312 KOG1479 Nucleoside transporter 39.7 93 0.002 28.8 6.2 21 244-264 62-82 (406)
313 PF13000 Acatn: Acetyl-coenzym 39.5 3.6E+02 0.0078 26.1 9.9 63 80-151 408-470 (544)
314 PF04226 Transgly_assoc: Trans 39.3 86 0.0019 18.8 4.4 17 350-366 4-20 (48)
315 PRK02237 hypothetical protein; 38.9 19 0.00042 25.9 1.4 50 16-70 56-106 (109)
316 COG4300 CadD Predicted permeas 38.8 1.8E+02 0.0038 23.4 6.6 33 133-165 48-80 (205)
317 PF01914 MarC: MarC family int 36.1 2.5E+02 0.0054 23.2 9.4 52 318-369 19-70 (203)
318 KOG3097 Predicted membrane pro 34.4 20 0.00044 31.9 1.1 26 255-280 75-100 (390)
319 PF02990 EMP70: Endomembrane p 33.6 2.9E+02 0.0062 26.9 8.8 29 240-268 299-327 (521)
320 KOG1237 H+/oligopeptide sympor 32.7 3.2E+02 0.0069 27.0 9.0 66 74-148 455-520 (571)
321 PF06912 DUF1275: Protein of u 32.1 2.9E+02 0.0063 22.8 12.3 36 125-161 165-200 (209)
322 PF01733 Nucleoside_tran: Nucl 31.2 20 0.00042 32.0 0.5 58 76-142 247-304 (309)
323 COG2095 MarC Multiple antibiot 27.2 3.6E+02 0.0079 22.3 7.8 51 319-369 23-73 (203)
324 TIGR02230 ATPase_gene1 F0F1-AT 26.9 2.4E+02 0.0053 20.2 6.1 29 250-278 55-83 (100)
325 PF11947 DUF3464: Protein of u 25.5 1.4E+02 0.0031 23.3 4.2 30 323-352 116-145 (153)
326 COG2962 RarD Predicted permeas 24.2 5E+02 0.011 22.9 8.7 79 195-281 62-140 (293)
327 PF12273 RCR: Chitin synthesis 22.3 45 0.00097 25.2 1.0 17 152-168 1-17 (130)
328 PRK15015 carbon starvation pro 21.9 8.3E+02 0.018 24.6 17.8 39 58-96 15-54 (701)
329 PF11299 DUF3100: Protein of u 21.6 4.4E+02 0.0094 22.4 6.5 53 81-143 175-227 (241)
330 PRK11111 hypothetical protein; 20.4 5.1E+02 0.011 21.6 8.5 50 319-369 26-76 (214)
331 PF02694 UPF0060: Uncharacteri 20.0 3.2E+02 0.0068 19.9 4.7 44 238-281 54-97 (107)
No 1
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=100.00 E-value=3.1e-38 Score=291.08 Aligned_cols=392 Identities=34% Similarity=0.521 Sum_probs=336.8
Q ss_pred chhhhhhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 2 AVNFFLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 2 ~~~~~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.+|+++++|+|++|...+.++..+|+.++|++|.++|.+|++|++||++++++.++..++.+.++..+....+.....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 57899999999999999999999999999999999999999999999999999999999888877777765445677778
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
+..++..+|..+.++..++++.|..++++ + .+|..++..+....+|.+++..++|.+.+..+++..|.+.+.+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p--~-----~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~ 163 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREP--E-----SRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAAL 163 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCC--c-----hhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHH
Confidence 88899999999999999999999998877 2 5899999999999999999999999999999999999999888
Q ss_pred HHHHHHHhhhcccccccCCC-------CC-c---chhHHHHHHHHHHhcccchhHHHHH-HHHhhhcccccccce-eEEE
Q 015348 162 VVLQFFITIAVRESALKLPK-------SQ-S---NVGIRAQLSELSAALRKPEIMYSVA-WFAASYSIIPVLTGT-MFFY 228 (408)
Q Consensus 162 ~~~~~~~~~~~~e~~~~~~~-------~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 228 (408)
..+..+..++++|++.++++ ++ . ....++..+++++.+++|.++...+ +.++ +......... ..++
T Consensus 164 ~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~a~~fy~ 242 (433)
T PF03092_consen 164 PLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFF-FNLPPSISSASSFYF 242 (433)
T ss_pred HHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHhccCCCCccEEEE
Confidence 88877666664443211110 00 0 0125677888999999999999888 5555 3333333334 6777
Q ss_pred EEeccC---CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeeh
Q 015348 229 QTQNLK---IRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVL 305 (408)
Q Consensus 229 ~~~~~g---~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (408)
..+..+ +|+...|.+..+..++.+++..+..++..+.+.|+++..+.++..+..+..+.++.+++..+|.++.++.+
T Consensus 243 ~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l 322 (433)
T PF03092_consen 243 QTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL 322 (433)
T ss_pred EeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence 777777 99999999999999999999999999999999999998888888777777777777887778899998888
Q ss_pred hhhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhh
Q 015348 306 IFSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCT 385 (408)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 385 (408)
....+....++..++|...+.+|++|++.+|+.+|+..++.|+|..++..++..+.+.++.++..+.+++.+++++.++.
T Consensus 323 gd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ 402 (433)
T PF03092_consen 323 GDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQ 402 (433)
T ss_pred EhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH
Confidence 88888889999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred hhhhhhhhccCCCCCC
Q 015348 386 ILPLYWSYFMPDGVKS 401 (408)
Q Consensus 386 ~~~~~~~~~~~~~~~~ 401 (408)
++++.+...+|++++.
T Consensus 403 ll~l~ll~lLp~~~~~ 418 (433)
T PF03092_consen 403 LLPLPLLFLLPPQKRI 418 (433)
T ss_pred HHHHHHHHHcCCCchh
Confidence 9999998888875543
No 2
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=100.00 E-value=2.1e-37 Score=289.48 Aligned_cols=386 Identities=28% Similarity=0.418 Sum_probs=304.0
Q ss_pred chhhhhhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchhHHHHHHHHHH-HHHHHHHHhccCcchHHHH
Q 015348 2 AVNFFLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQA-VSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 2 ~~~~~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 80 (408)
++..++++++|+|+++++.+.++..+++.++|++|+++||+|..|++||++++++.++.. ++...++..+ ++....
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~---~~~~~~ 123 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKV---SSAKVA 123 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccccc---chHHHH
Confidence 567899999999999999999999999999999999999999999999999999987763 4333333222 234445
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
.+.+++.+++.+..+++.+++..|..+ +++ + .++..++..+...++|.++|+.++|.+.+..+|+..|++.+.
T Consensus 124 ~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~-~-----~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~ 196 (468)
T TIGR00788 124 AAFIFLAALAKALYDVLVDSLYSERIR-ESP-S-----AGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAA 196 (468)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC-C-----cCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHH
Confidence 558899999999999999999999998 432 2 466778877778889999999999999999999999999988
Q ss_pred HHHHHHHHhhhcccccc-cCCCCCcc-------------hhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeE
Q 015348 161 LVVLQFFITIAVRESAL-KLPKSQSN-------------VGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMF 226 (408)
Q Consensus 161 ~~~~~~~~~~~~~e~~~-~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (408)
..++..+...+++|++. ..++.+++ +..++..++.++.+++|.++..+++.++.+...........
T Consensus 197 l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f 276 (468)
T TIGR00788 197 LLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF 276 (468)
T ss_pred HHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE
Confidence 88877666677888652 11110000 12344456677778999998877777663333344444444
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
.+..+.+|+++.+.|......+++.+++..+.+++.+|++.|+.+..+.++.++..+....+...++...+.++.++...
T Consensus 277 ~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~ 356 (468)
T TIGR00788 277 CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLG 356 (468)
T ss_pred EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeee
Confidence 46667799999999999999999999999999999999999999988888777765553333333333234445444444
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhh
Q 015348 307 FSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCTI 386 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 386 (408)
...+.........+|...++++.+|++.+|+.+|+.+++.++|..+++.++|.+.++.|.+.+++...+....++.+..+
T Consensus 357 ~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l 436 (468)
T TIGR00788 357 DSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPL 436 (468)
T ss_pred hhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHH
Confidence 44444445566777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCC
Q 015348 387 LPLYWSYFMPD 397 (408)
Q Consensus 387 ~~~~~~~~~~~ 397 (408)
+++.+...+|+
T Consensus 437 ~~l~~~~llP~ 447 (468)
T TIGR00788 437 LPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHhCCC
Confidence 99999888995
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-34 Score=251.05 Aligned_cols=324 Identities=16% Similarity=0.121 Sum_probs=265.9
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.-+.+|+|+|..+.|+..+.+.+...+ .|+...+.|| ++||+.++....++.++.+++++++ |++.+++.
T Consensus 37 p~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-----~~Rr~lLl~~l~lFi~~n~l~alAp----~f~~Ll~a 107 (394)
T COG2814 37 PPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-----LERRRLLLGLLALFIVSNLLSALAP----SFAVLLLA 107 (394)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----cchHHHHHHHHHHHHHHHHHHHHhc----cHHHHHHH
Confidence 346789999999999999999988887 9999999999 9999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
|++.|+..|...+...+...++.|+++ |+++.+....+.+++.++|.++|.++-+.+|||..|+..+.+.+
T Consensus 108 R~~~g~a~G~f~~i~~~~a~~lvpp~~---------~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~l 178 (394)
T COG2814 108 RALAGLAHGVFWSIAAALAARLVPPGK---------RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLAL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCccc---------hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999999999875 99999999999999999999999999999999999999999998
Q ss_pred HHHHHhh-hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHH
Q 015348 164 LQFFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGI 242 (408)
Q Consensus 164 ~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 242 (408)
+..+..+ .+| +++.+++ .+...++..+.+|+|.++...+..++........+++..++..+..|+|.+..++
T Consensus 179 l~~~~~~~~lP-~~~~~~~------~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~ 251 (394)
T COG2814 179 LALLLLWKLLP-PSEISGS------LPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSL 251 (394)
T ss_pred HHHHHHHHhCC-CccCCCC------CCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHH
Confidence 8876544 488 1111111 1122334456699999999999888877777788888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH
Q 015348 243 SKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF 322 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (408)
....++++.++|+.+.||+.|| +.|+.+.....+.++..+...+ .+...+......+..++.. .|.
T Consensus 252 ~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~----------~~~~~~~~~~~~~~wg~a~---~~~ 317 (394)
T COG2814 252 VLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF----------TGASPALALALLFLWGFAF---SPA 317 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH----------hcchHHHHHHHHHHHHHHh---hhh
Confidence 9999999999999999999999 8788777766666555444221 1111112222223333332 333
Q ss_pred -HHHHHHhcC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 323 -SVYIAQVCP--PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 323 -~~~~~~~~p--~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
+.+..+..+ ||.+..+.+++.+..|+|..+|..++|.+.|+.|+.
T Consensus 318 ~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~ 365 (394)
T COG2814 318 LQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYA 365 (394)
T ss_pred hhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchH
Confidence 445555544 588899999999999999999999999999997764
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=7.1e-34 Score=262.07 Aligned_cols=324 Identities=12% Similarity=0.058 Sum_probs=246.6
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
..+++|+|.|+++.|+..+...+.+.+ ++++|.++|| +|||+++..+..+..++.+.+.+.+ +++.+++.
T Consensus 33 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~ 103 (390)
T PRK03545 33 SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-----VERRKLLIGLFVLFIASHVLSALAW----NFTVLLIS 103 (390)
T ss_pred HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CChHHHHHHHHHHHHHHHHHHHHhc----cHHHHHHH
Confidence 356789999999999999999877766 8999999999 9999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
|++.|++.+...+...+++.|+.|+++ |++++++...+.++|..+||.+++.+.+..|||+.|++.+++++
T Consensus 104 r~~~G~~~~~~~~~~~~~i~~~~~~~~---------r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~ 174 (390)
T PRK03545 104 RIGIAFAHAIFWSITASLAIRVAPAGK---------KAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGAL 174 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhh---------hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHH
Confidence 999999999988888899999998754 99999999999999999999999999999999999999988877
Q ss_pred HHHHHhhh-cccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHH
Q 015348 164 LQFFITIA-VRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGI 242 (408)
Q Consensus 164 ~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 242 (408)
+..+..+. +||++++++ + ..++.++.+|||.++......++............+++..+..|.+..+.+.
T Consensus 175 l~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~ 245 (390)
T PRK03545 175 ITLLLLIKLLPLLPSEHS-----G----SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATL 245 (390)
T ss_pred HHHHHHHHhCCCCCCCCc-----c----hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH
Confidence 76554433 565432211 1 1233455688888776554443322222222334455566668899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH
Q 015348 243 SKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF 322 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (408)
......++.+++.++.+++.||+++|+.. .+............. .....+......+..+++.....+.
T Consensus 246 ~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~l~g~~~~~~~~~ 314 (390)
T PRK03545 246 LLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLP----------AANSEWHLSVLSIFWGIAIMCIGLA 314 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHH----------HhchHHHHHHHHHHHHHHHhcchHH
Confidence 99889999999999999999999876543 333333332222111 1112223334455555555444454
Q ss_pred -HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 323 -SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 323 -~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
...+.+..| +.+++++|+++...++|..+||.++|.+.|+.|..
T Consensus 315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~ 359 (390)
T PRK03545 315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLS 359 (390)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh
Confidence 667777766 67899999999999999999999999999998864
No 5
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=100.00 E-value=4.7e-32 Score=254.13 Aligned_cols=376 Identities=15% Similarity=0.180 Sum_probs=264.1
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCc--chHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSS--ISIFT 79 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~ 79 (408)
+++|+++++|+|+.++|++.++..+...+ +|+.|+++||++.|+.+|||+++.+....+++.+++...+... ...+.
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 46788899999999999999999966555 9999999999988777778999999998888888887765321 13566
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh-------cCChh
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-------RFSPP 152 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~g~~ 152 (408)
+++.+++.+++.+...++..++..|..++++ +|++..++.+....+|..+++.+.+.+.. ..+||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~--------~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~ 173 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPR--------ERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWF 173 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHH
Confidence 7778888999999988888899999887654 59999999888888988887776665542 46899
Q ss_pred hHHHHHHHHHHHHHHHh-hhcccccccCCCC-CcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEE
Q 015348 153 SMFLFFGLLVVLQFFIT-IAVRESALKLPKS-QSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQT 230 (408)
Q Consensus 153 ~~f~i~~~~~~~~~~~~-~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (408)
..+.+.+++.++..+.. +..||++++.+++ +++.+.++. .++.++||.++..++..++............++|.+
T Consensus 174 ~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (437)
T TIGR00792 174 MFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQI---FKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFT 250 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHH---HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEe
Confidence 99999888877776554 4477765321111 112223333 344588999888776666544444333444555665
Q ss_pred eccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHH
Q 015348 231 QNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSL 310 (408)
Q Consensus 231 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
+.++ ++...+.+.....++.+++.++.+++.||+++|+.+..+..+..+..+...+ . ++..+.......
T Consensus 251 ~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~ 319 (437)
T TIGR00792 251 YVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFF--------A--GSNLPLILVLII 319 (437)
T ss_pred eecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--------c--chhHHHHHHHHH
Confidence 5566 5666777777788999999999999999999999888776665554433221 0 011112233334
Q ss_pred HHHHHHHhhhhH-HHHHHHhcC-------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc-------hH
Q 015348 311 LEVMFFFKILPF-SVYIAQVCP-------PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSG-------LP 375 (408)
Q Consensus 311 ~~~~~~~~~~~~-~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~-------~~ 375 (408)
..+++.....+. +++.+|.+| ++.+|+.+|+.+...+++..+++.+.|.+.+..|+....-.. ..
T Consensus 320 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~ 399 (437)
T TIGR00792 320 LAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKI 399 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHH
Confidence 445554444455 777777765 567899999999999999999999999999998875421110 12
Q ss_pred HHHHHHHhhhhhhhhhhh-ccCCCCC
Q 015348 376 LALIIQAVCTILPLYWSY-FMPDGVK 400 (408)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~-~~~~~~~ 400 (408)
....+.+++.++++...+ +.|.+++
T Consensus 400 ~~~~~p~i~~~~~~~~~~~~y~l~~~ 425 (437)
T TIGR00792 400 LMFAVPALFLLLAAIIIGRFYKLTEK 425 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHeeCcHH
Confidence 233444455555555554 6665443
No 6
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.5e-32 Score=254.03 Aligned_cols=335 Identities=10% Similarity=-0.005 Sum_probs=247.3
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhc-cCcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILS-QSSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 80 (408)
++.+. ++++.|+.+.|++.+...++..+ +++.|+++|| +|||+.+..+.++.+++...+.... ....+++.+
T Consensus 40 ~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-----~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (417)
T PRK10489 40 VPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADR-----YDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAI 113 (417)
T ss_pred HHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhh-----cCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 34444 67788999999999999988877 9999999999 9999999888877777665544210 012278888
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
++.|++.|++.+...++..+.+.|+.|++ +|++++++.+...++|..+||.+++.+.+..+|++.|++.++
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~ 184 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVGRE---------NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAA 184 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCHH---------HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999998888889999998875 389999999999999999999999999998899999998887
Q ss_pred HHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhH
Q 015348 161 LVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVL 240 (408)
Q Consensus 161 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (408)
..++..+..+.+||++++++++ ++..++..+..+..+++|.++...+..++... ........+.|..+.+|.++...
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~ 261 (417)
T PRK10489 185 GTFITLLPLLRLPALPPPPQPR--EHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQI 261 (417)
T ss_pred HHHHHHHHHHhCCCCCCCCccc--ccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHh
Confidence 7777666666677754332221 11122222334445778876665544443222 22334455666666689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhh
Q 015348 241 GISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKIL 320 (408)
Q Consensus 241 g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (408)
|++.....++.+++.++.+++.||.++++.+..+.....+..+... ..+.++......+..+++.....
T Consensus 262 g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~g~~~~~~~ 330 (417)
T PRK10489 262 GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFG-----------LMPMWILAVLCLALFGYLSAISS 330 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHH-----------ccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987777666666554444433211 11222223334444555555445
Q ss_pred hH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 321 PF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 321 ~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
+. .+++++..|++.||+++|+++...++|..+||.+.|.+.|..|.
T Consensus 331 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~ 377 (417)
T PRK10489 331 LLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTP 377 (417)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhch
Confidence 55 67889999999999999999999999999999999999998775
No 7
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.6e-32 Score=249.82 Aligned_cols=338 Identities=13% Similarity=0.114 Sum_probs=254.7
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhcc-CcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQ-SSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (408)
++.|. ++++.|+.+.+++.+...++..+ +|++|+++|| +|||+.+..+.++..++..+..+.+. ...+++.+
T Consensus 22 ~~~~~-~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (365)
T TIGR00900 22 LPLYV-LAGTGSASVLSLAALAGMLPYVVLSPIAGALADR-----YDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQV 95 (365)
T ss_pred HHHHH-HHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHh-----hchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 44555 56899999999999999988777 9999999999 99999999998887777776655431 12378899
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
++.|++.|++.+...+..++++.|+.|+++ |++.+++.+...++|.++||.+++.+.+..|||+.|++.++
T Consensus 96 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~ 166 (365)
T TIGR00900 96 YVLAGILAIAQAFFTPAYQAMLPDLVPEEQ---------LTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAV 166 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHH---------HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 999999999999999999999999998764 99999999999999999999999999999999999999887
Q ss_pred HHHHHHHHhhhcccccccC--CCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhccccccc-ceeEEEEEeccCCCh
Q 015348 161 LVVLQFFITIAVRESALKL--PKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLT-GTMFFYQTQNLKIRS 237 (408)
Q Consensus 161 ~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~ 237 (408)
..++..+..+.++++++++ +++.+++..++..+..++.+|+|.++......++......... ...+++..+.+|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (365)
T TIGR00900 167 GFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGS 246 (365)
T ss_pred HHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch
Confidence 7666655444433322221 1111111122333445556788888877666555333333333 445555555689999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
.+.+.......++.+++.++.+++.||.++++.+..+....++....... . +++.+......+..+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~g~~~~ 316 (365)
T TIGR00900 247 THYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGL---------T-PPNFPLFLVLWFAIGVGYG 316 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHh---------h-chhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888777665544444333211 0 1112233444555666665
Q ss_pred hhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 318 KILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
...|. .++..|..|+++||++.|+.++..+++..++|.++|.+.|..|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 317 PINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 55666 8899999999999999999999999999999999999998764
No 8
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-33 Score=242.40 Aligned_cols=335 Identities=14% Similarity=0.095 Sum_probs=264.2
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.++.+|.++|.+|+|++.+...+.|-+ +.+.|.++|| .+.|..+..++++.++..+++++++ +.+.+.++
T Consensus 53 p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-----~npr~fm~~gLilsai~nil~Gfs~----s~~~~~~l 123 (448)
T COG2271 53 PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-----SNPRYFMAFGLILSAIVNILFGFSP----SLFLFAVL 123 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-----CCCceeehHHHHHHHHHHHHHhhhh----HHHHHHHH
Confidence 456788999999999999999999988 9999999999 9999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHH--HHHhhcCChhhHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLV--GFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~--~~l~~~~g~~~~f~i~~~~ 161 (408)
.++.|...+...|++...+..+.+++| ||+..++++.+.++|..+.|++. +++..+.+||..|++.+++
T Consensus 124 ~~lng~fQg~Gwpp~~~~i~~Wfsr~e---------RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgii 194 (448)
T COG2271 124 WVLNGWFQGMGWPPCARTITHWFSRKE---------RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGII 194 (448)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHcCccc---------cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 999999999999999999999999874 99999999999999999999999 8998889999999999999
Q ss_pred HHHHHHHhhh-cccccccCC----------CCC--cch------hHHHHHHHHHHhcccchhHHHHHHHHhhhccccccc
Q 015348 162 VVLQFFITIA-VRESALKLP----------KSQ--SNV------GIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLT 222 (408)
Q Consensus 162 ~~~~~~~~~~-~~e~~~~~~----------~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (408)
.++..++.++ .+++|++.. +.+ +++ +.++.+ .+.+++||.+|.+.+..++.+..-....
T Consensus 195 aiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~--~~YVL~Nk~iW~la~a~vfvYivR~gi~ 272 (448)
T COG2271 195 AIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIF--VKYVLKNKLIWLLALANVFVYVVRYGIN 272 (448)
T ss_pred HHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHH--HHHHHcChHHHHHHHHHHHHHHHHHHHh
Confidence 8887666554 776654311 000 000 011111 2345899999999999988899999999
Q ss_pred ceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC--CCceehHHHHHHHHHHHHHhHhhhcccccccCcCc
Q 015348 223 GTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSV--SPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPD 300 (408)
Q Consensus 223 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (408)
++.|.|+.|..|+|.....+.....-.++++|.++.|+++||. |+|........+.....+...+ .....
T Consensus 273 dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w--------~~~~~ 344 (448)
T COG2271 273 DWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYW--------LAPNG 344 (448)
T ss_pred hhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH--------cCCCc
Confidence 9999999999999999999999999999999999999999996 4554443333322222222222 11112
Q ss_pred eEeehhhhHHHHHHH-HHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCC
Q 015348 301 SLYVLIFSSLLEVMF-FFKILPFSVYIAQVCPPGCEGSIMAFVMSAVAL-AFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~l-g~~ig~~~~g~l~~~~g~~ 367 (408)
+.++.....+..|+. .+..+-+-....|..|++..|++.|+...+..+ |...+....|++.|.+|.+
T Consensus 345 ~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~ 413 (448)
T COG2271 345 SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWD 413 (448)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCc
Confidence 222222222222222 122222345678999999999999999999998 8889989999998886654
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.5e-32 Score=251.72 Aligned_cols=330 Identities=14% Similarity=0.092 Sum_probs=239.5
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+.+++|.|+++.+++.+...++..+ .++.|+++|| +|||+.+..+.++..++.+++.+.+ +++.+++.|
T Consensus 40 ~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 110 (406)
T PRK11551 40 RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-----IGRKRILIVSVALFGLFSLATAQAW----DFPSLLVAR 110 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCchhHHHHHHHHHHHHHHHHHhc----cHHHHHHHH
Confidence 45688999999999999999988777 8999999999 9999999999988888888888888 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+...+++.|+.|++ +|++.+++.+....+|..+++.+++.+.+..+||+.|++.++..++
T Consensus 111 ~l~G~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (406)
T PRK11551 111 LLTGVGLGGALPNLIALTSEAVGPR---------LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLL 181 (406)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 9999999999999999999999875 3999999999999999999999999888889999999998776665
Q ss_pred HHHH-hhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHH
Q 015348 165 QFFI-TIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGIS 243 (408)
Q Consensus 165 ~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 243 (408)
..+. ..++||+++++++++++++.++..+..++..+++..+......+...........+.+.+.. +.|+++.+.+..
T Consensus 182 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~ 260 (406)
T PRK11551 182 LVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLV-GQGLSRSQAGLV 260 (406)
T ss_pred HHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCChhhhhHH
Confidence 5443 34478765432221111111111122211112222222222222211122222233344443 478999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF- 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (408)
.....++.+++.++.+++.||+++|+.+..+.+...+....... . ...+......+..++......+.
T Consensus 261 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~g~~~~~~~~~~ 329 (406)
T PRK11551 261 QIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA----------A-PSFAGMLLAGFAAGLFVVGGQSVL 329 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh----------c-CcHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999988877654444433322111 1 11112223333444444334455
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 323 SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 323 ~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.++..|..|+++||+..|+.++..+++..++|.++|.+.++.+
T Consensus 330 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 372 (406)
T PRK11551 330 YALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR 372 (406)
T ss_pred HHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC
Confidence 7888999999999999999999999999999999999988643
No 10
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=3.1e-31 Score=245.31 Aligned_cols=370 Identities=11% Similarity=0.081 Sum_probs=247.6
Q ss_pred chhhhhhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcch-hHHHHHHHHHHHHHHHHHHhccCcchHHHH
Q 015348 2 AVNFFLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRV-PYIAIGAFLQAVSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 2 ~~~~~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (408)
+++.|++ +.|+|.+|+|++..+.. +++++|++|+++||++.++.||| +++..+.+..+++...+++.+. ..+++.+
T Consensus 21 ~~~~~l~-~~g~~~~~ig~~~~~~~-~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~-~~~~~~l 97 (402)
T PRK11902 21 TLQAWMT-VEGLDIQTIGFFSLVGQ-AYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPP-HAALWPL 97 (402)
T ss_pred HHHHHHH-HcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCc-cchHHHH
Confidence 4677886 55999999999955544 67789999999999544333665 5888888888888888777642 2367778
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-CChhhHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-FSPPSMFLFFG 159 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-~g~~~~f~i~~ 159 (408)
++..++.++..+..+++.++++.|+.|+++ |++++++...+.++|.++++.+++.+.+. .|||..|++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~---------r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a 168 (402)
T PRK11902 98 AGLAVLVAFLSASQDIVFDAYSTDVLHPEE---------RGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMA 168 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhh---------hhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHH
Confidence 888888899999999999999999988754 99999999999999999999999999885 59999999998
Q ss_pred HHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhh
Q 015348 160 LLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSV 239 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 239 (408)
+..++..+..+++||+++++++++ +..++..++.++.+|||.++..++..++............+++..++.|+++++
T Consensus 169 ~~~l~~~l~~~~~~e~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~ 246 (402)
T PRK11902 169 GLMLAGALTTLWAPEPEVPARPPR--SLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGE 246 (402)
T ss_pred HHHHHHHHHHHhcCCCcccccccc--hhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH
Confidence 887766665556777654322211 111223344556689998877666554423221111122233455668999999
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHH-HHHH
Q 015348 240 LGISKVFG-QAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEV-MFFF 317 (408)
Q Consensus 240 ~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (408)
.++..... .++.+++..+.+++.||+++|+.+..+.....+..+....+. . .++..+.+........ ....
T Consensus 247 ~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~------~-~~~~~~~~~~~~~~~~~~~g~ 319 (402)
T PRK11902 247 VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLA------V-TPKHLWTMALAIGIENLCGGM 319 (402)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH------h-cCCcHHHHHHHHHHHHHHHHH
Confidence 99887554 456889999999999999988877655555443322211100 0 0112112222222111 1122
Q ss_pred hhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhhhhhhhhhccCC
Q 015348 318 KILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCTILPLYWSYFMPD 397 (408)
Q Consensus 318 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (408)
...+..+.....++++..++.+++.++..+++..+++.++|.+.|.+|+. ..+.+.+++.++.+...++.++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~--------~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 320 GTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWP--------GFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--------HHHHHHHHHHHHHHHHHHHHhh
Confidence 22233555566666666677778888888888887788999999998853 2333444444444555555554
Q ss_pred CCC
Q 015348 398 GVK 400 (408)
Q Consensus 398 ~~~ 400 (408)
+-+
T Consensus 392 ~~~ 394 (402)
T PRK11902 392 TIG 394 (402)
T ss_pred hcc
Confidence 433
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.1e-31 Score=250.39 Aligned_cols=334 Identities=15% Similarity=0.125 Sum_probs=239.2
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+.+++|+|+.+.|++.+...+++.+ +++.|+++|| +|||+++.++.++.+++.+++.+.+ +++.+++.|
T Consensus 48 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~ 118 (434)
T PRK11663 48 EMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-----SNARYFMGIGLIATGIINILFGFSS----SLWAFALLW 118 (434)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-----cCCchhHHHHHHHHHHHHHHHHHHh----HHHHHHHHH
Confidence 34578999999999999999988777 9999999999 9999999999999999999999988 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+...+++.|+.|++ +|++.+++.+...++|.++++.+++.+.+.+|||+.|.+.+++.++
T Consensus 119 ~l~g~~~g~~~~~~~~~~~~~~~~~---------~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~ 189 (434)
T PRK11663 119 VLNAFFQGWGWPVCAKLLTAWYSRT---------ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIV 189 (434)
T ss_pred HHHHHHHHccchHHHHHHHHhCCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 9999999988888889999999875 3999999999999999999999999999999999999998877665
Q ss_pred HHH-HhhhcccccccCC--C----C-C--c--chh--HHHHHHHHH--HhcccchhHHHHHHHHhhhcccccccceeEEE
Q 015348 165 QFF-ITIAVRESALKLP--K----S-Q--S--NVG--IRAQLSELS--AALRKPEIMYSVAWFAASYSIIPVLTGTMFFY 228 (408)
Q Consensus 165 ~~~-~~~~~~e~~~~~~--~----~-~--~--~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (408)
..+ ..+++||++++.. + + + + +++ .+...++.. ..+++|.++...+..++..........+.+.|
T Consensus 190 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 269 (434)
T PRK11663 190 VGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLY 269 (434)
T ss_pred HHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 3344676543210 0 0 0 0 000 000112221 24677887776665555344444445566677
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCC--CceehHHHHH-HHHHHHHHhHhhhcccccccCcCceEeeh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVS--PRKLISAIQA-MMAVFMISDVLFVKGVYREMGVPDSLYVL 305 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (408)
..++.|++..+.+.......++++++.++.|++.||+. +|+....... ........... ....+.. ..
T Consensus 270 l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~ 340 (434)
T PRK11663 270 MSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL--------MPFASYV-MQ 340 (434)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH--------cccccHH-HH
Confidence 76778999999999989999999999999999999983 3333222111 11111111111 0011111 11
Q ss_pred hhhHHHHHHHHHhhh-hHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 306 IFSSLLEVMFFFKIL-PFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 306 ~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
....+..++...... .......|..|++.+|++.|+.++..++|..++|.+.|++.|+.|+
T Consensus 341 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~ 402 (434)
T PRK11663 341 AACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHW 402 (434)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhccc
Confidence 111122222111111 1244567889999999999999999999999999999999998774
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4.8e-31 Score=242.94 Aligned_cols=322 Identities=13% Similarity=0.086 Sum_probs=239.7
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
..+++|+|+|+++.|++.+.+.+.+.+ +++.|+++|| +|||+++..+..+.+++.+.+++++ +++.+++.
T Consensus 33 p~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-----~G~r~~l~~~~~l~~~~~~~~~~a~----~~~~ll~~ 103 (393)
T PRK09705 33 PQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH-----VSERRSVAISLLLIAVGALMRELYP----QSALLLSS 103 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHCc----chHHHHHH
Confidence 357789999999999999999988777 9999999999 9999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC-ChhhHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF-SPPSMFLFFGLLV 162 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~-g~~~~f~i~~~~~ 162 (408)
|+++|++.+...+...+.+.++.| + +|+++++....+.+.|..+|+.+++++.++. +||..+.+.++..
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~---------~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~ 173 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-Q---------RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPA 173 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-c---------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999888888888875 3 4899999999999999999999999988875 8999887766655
Q ss_pred HHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHH
Q 015348 163 VLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGI 242 (408)
Q Consensus 163 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 242 (408)
++.....+...+++++++++ ++. +.++.+++|..+...+..++..........+.+.+..+ .|.+..+.|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~ 244 (393)
T PRK09705 174 VVALFAWWWQSAREVASSHK-TTT-------TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGS 244 (393)
T ss_pred HHHHHHHHHHhcCCCccccC-CCc-------CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhH
Confidence 44433333332221111111 100 11233567777666555544344444445556666654 7999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH
Q 015348 243 SKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF 322 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (408)
......++.+++.++.+++.||.++|+....+..+..+....... ... +.. ... ....+++.+...|.
T Consensus 245 ~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~--------~~~-~~~-~~~--~~l~g~g~g~~~~~ 312 (393)
T PRK09705 245 LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW--------LPL-QLP-VLW--AMVCGLGLGGAFPL 312 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH--------ccc-hHH-HHH--HHHHHHhccchHHH
Confidence 999999999999999999999999988877776555444333211 000 110 111 12234444444454
Q ss_pred -HHHHHHhcC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 323 -SVYIAQVCP-PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 323 -~~~~~~~~p-~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.....+..+ ++++|+.+|+.+...+++..++|.+.|++.|..|.
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN 358 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 445556664 67899999999999999999999999999999873
No 13
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3.1e-31 Score=243.61 Aligned_cols=329 Identities=18% Similarity=0.177 Sum_probs=232.9
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHH-HHHHHHHHHHHHHHHhccCcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIA-IGAFLQAVSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (408)
++.|+++++|.|+.+.|++.+...+...+ +|++|.++|| +||||.++ .+.....++.+++++++ +++.+
T Consensus 20 l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-----~g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~l 90 (375)
T TIGR00899 20 LSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDY-----QGDRKGLILFCCLLAALACLLFAWNR----NYFLL 90 (375)
T ss_pred HHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCchHHHHHHHHHHHHHHHHHHhcc----hHHHH
Confidence 56688899999999999999998865554 9999999999 99887655 45555566667777777 89998
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
++.|++.|.+.+...+..+++..|..|+++ + .++...+......++|.++||.+++.+.+..|||+.|++.++
T Consensus 91 ~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 91 LVLGVLLSSFASTANPQLFALAREHADRTG--R-----EAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHhhhcc--h-----hhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 999999888888788888788888876543 1 233336777778899999999999999999999999999988
Q ss_pred HHHHHHHHhh-hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhh
Q 015348 161 LVVLQFFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSV 239 (408)
Q Consensus 161 ~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 239 (408)
..++..+..+ ++||++++++++++ ++ +.++.+++|+++......++.+..........+.|..+++|.++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 236 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYPRGAPGALT----RL---EVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKL 236 (375)
T ss_pred HHHHHHHHHHHhCCCcccCcccccC----cc---hhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHH
Confidence 7776655544 47876543322111 11 1222466776665544444323322223344555666778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhh
Q 015348 240 LGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKI 319 (408)
Q Consensus 240 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (408)
.+..........+++..+.+++.||+++|+.+..+.+........... .++.+.........+++.+..
T Consensus 237 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 237 AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA-----------DNSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHH
Confidence 998887777778888899999999999998877665543333222110 011112223333444444444
Q ss_pred hhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 320 LPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 320 ~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.|. ..+.+|..|+ ++++++|+.+...++|..++|.+.|.+.|..|+
T Consensus 306 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~ 352 (375)
T TIGR00899 306 AGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSY 352 (375)
T ss_pred HHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 455 6777888875 567999999999999999999999999998764
No 14
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=4e-31 Score=242.95 Aligned_cols=332 Identities=15% Similarity=0.134 Sum_probs=246.3
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
..++++++|+|+++.|++.+...++..+ +|++|.++|| +|||+.+..+.++.+++.+.+.+.+ +++.+++
T Consensus 26 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-----~G~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 96 (377)
T TIGR00890 26 APPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-----FGPRAVAMLGGILYGLGFTFYAIAD----SLAALYL 96 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-----cCccchhHHhHHHHHHHHHHHHHHH----HHHHHHH
Confidence 4567889999999999999999988877 9999999999 9999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
.|.+.|++.+...+.....+.++.|+ +|+++.+....+.++|..+++.+.+.+.+..|||+.|++.++..
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 166 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVKWFPD----------KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIF 166 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHHHcCc----------ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 99999999998877776777777753 48999999999999998887777777778889999999999888
Q ss_pred HHHHHHhh-hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHH
Q 015348 163 VLQFFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLG 241 (408)
Q Consensus 163 ~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 241 (408)
++..+..+ +++|+++++++++++.+ +..++.++.+|+|.++...+..+.............++| .+++|.+..+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 243 (377)
T TIGR00890 167 LLVIVLGAFLIGYPPGQLIKTNIEVS--VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPY-GQSLGLSDGFLV 243 (377)
T ss_pred HHHHHHHHHheecCchhccccCcccc--hhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHH-HHHcCCCHHHHH
Confidence 77765544 45554433221111111 111233456788887766555444222222222223333 345788888889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhh
Q 015348 242 ISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILP 321 (408)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (408)
.......++.+++.++.+++.||+++|+.+..+.....+..+.... ................++..+...+
T Consensus 244 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 244 LAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLF---------IPMLNDVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH---------cccchhHHHHHHHHHHHHHhccchh
Confidence 9999999999999999999999999999887776666555443221 0000111111222333343333334
Q ss_pred H-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 322 F-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 322 ~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
. ..+..|..|+++|++.+|+.+...++|..++|.+.|.+.+..|+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 360 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGF 360 (377)
T ss_pred ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 4 67888999999999999999999999999999999999988764
No 15
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=7.2e-31 Score=241.58 Aligned_cols=322 Identities=12% Similarity=0.020 Sum_probs=240.5
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+.+++|.|+++.|+..+...+...+ +|+.|.++|| +|||+.+..+.++.+++.+++.+.+ +++.+++.|
T Consensus 45 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-----~grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r 115 (394)
T PRK10213 45 PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-----TDRRYVVILFAVLLTLSCLLVSFAN----SFSLLLIGR 115 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcHHHHHHHHHHHHHHHHHHHHHC----hHHHHHHHH
Confidence 35689999999999999998876666 9999999999 9999999999999999999988888 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+...+++.|+.|++ +|+++++......++|.++||.+++.+.+.+|||+.|++.+++.++
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~---------~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~ 186 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPR---------TVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVL 186 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999875 3999999999999999999999999999999999999998877665
Q ss_pred HHHHhh-hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHH
Q 015348 165 QFFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGIS 243 (408)
Q Consensus 165 ~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 243 (408)
..+... ..||+++++++ .++ +.++.+|+|.++...+..++............++++.++.|+++...+..
T Consensus 187 ~~l~~~~~~p~~~~~~~~------~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~ 257 (394)
T PRK10213 187 CIFWIIKSLPSLPGEPSH------QKQ---NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLV 257 (394)
T ss_pred HHHHHHHHCCCCCccccc------chh---HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHH
Confidence 544433 35664322111 111 22345788888876555444233222223333344455679999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF- 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (408)
....+++.+++..+.+++.||.+ |+.+..+............. ..+..+......+..+++.....+.
T Consensus 258 ~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~l~G~~~~~~~~~~ 326 (394)
T PRK10213 258 LLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTL----------WGSDKIVATGVAIIWGLTFALVPVGW 326 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHH----------HhhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999999999999999954 44333333332222211111 0111223334455556666555565
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 323 SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 323 ~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+.+++..| +++++..+......++|..+|+.++|.+.|..|.
T Consensus 327 ~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~ 369 (394)
T PRK10213 327 STWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGL 369 (394)
T ss_pred HHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 668888887 5567888888888999999999999999998764
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=3.6e-31 Score=245.75 Aligned_cols=333 Identities=13% Similarity=0.127 Sum_probs=240.4
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
..+++++|.|+.+.+++.+...++..+ +++.|.++|| +|||+.+..+.++..++.+++.+.+ +++.+++.
T Consensus 36 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~ 106 (405)
T TIGR00891 36 AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR-----YGRRLPMVTSIVLFSAGTLACGFAP----GYITMFIA 106 (405)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHHHhc----cHHHHHHH
Confidence 356789999999999999999987777 9999999999 9999999999999999999998888 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC--hhhHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS--PPSMFLFFGLL 161 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g--~~~~f~i~~~~ 161 (408)
|++.|++.+...+...+++.|+.|+++ |++++++.+....+|.++++.+++.+.+..+ ||+.|.+.++.
T Consensus 107 ~~l~G~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~ 177 (405)
T TIGR00891 107 RLVIGIGMGGEYGSSAAYVIESWPKHL---------RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILP 177 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHHHhCChhh---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHH
Confidence 999999999999999999999998754 9999999999999999999999999988766 99999887666
Q ss_pred HHHHHHHhhhcccccccCCCCCcchhHHHHHHH------------------HHHhcccc-h-hHHHHHHHHhhhcccccc
Q 015348 162 VVLQFFITIAVRESALKLPKSQSNVGIRAQLSE------------------LSAALRKP-E-IMYSVAWFAASYSIIPVL 221 (408)
Q Consensus 162 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 221 (408)
.++..+....+||+++.++++++++..++..++ .++..+++ . +........+........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (405)
T TIGR00891 178 IIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPI 257 (405)
T ss_pred HHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 655555555577764322111110000000000 00000000 0 111111111112222233
Q ss_pred cceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCce
Q 015348 222 TGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDS 301 (408)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (408)
....+.|..++.|++..+.+.+.....++.+++.++.+++.||+++|+.+..+............. ....
T Consensus 258 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~----------~~~~ 327 (405)
T TIGR00891 258 QDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFA----------IGAN 327 (405)
T ss_pred hhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHH----------hCCc
Confidence 345566666778999999999999999999999999999999999999887666544332222111 1111
Q ss_pred EeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 302 LYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.+.........+.......+. ..+++|..|+++||+++|+.+...+++..++|.+.|.+.|+.|
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 328 VAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred hHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 112222222223332223333 6788999999999999999999999999999999999999988
No 17
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=8.5e-32 Score=253.62 Aligned_cols=334 Identities=14% Similarity=0.105 Sum_probs=238.9
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhc-cCcchHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILS-QSSISIFTMSLF 83 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 83 (408)
.+++|+|+|+.+.|++.+.+.+++.+ +++.|+++|| +|||+++..+.++.++..+.++... ....+++.+++.
T Consensus 54 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-----~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (467)
T PRK09556 54 DMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADG-----KNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIAL 128 (467)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhc-----cCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 46789999999999999999988877 9999999999 9999999888888777776665420 011289999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC---ChhhHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF---SPPSMFLFFGL 160 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~---g~~~~f~i~~~ 160 (408)
|++.|++.+...+...+++.|+.|+++ ||+++++...+.++|.++++.+..++.+.. +||..|.+.++
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~---------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~ 199 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRK---------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSI 199 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccc---------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHH
Confidence 999999999998998899999999864 999999999999999999998887776653 69999988887
Q ss_pred HHHHHHHHhhh-cccccccCC---------CC--Ccc-hhHHH--HHHH-H-HHhcccchhHHHHHHHHhhhcccccccc
Q 015348 161 LVVLQFFITIA-VRESALKLP---------KS--QSN-VGIRA--QLSE-L-SAALRKPEIMYSVAWFAASYSIIPVLTG 223 (408)
Q Consensus 161 ~~~~~~~~~~~-~~e~~~~~~---------~~--~~~-~~~~~--~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (408)
+.++..+..++ .++++++.. +. +++ .+.++ ..++ . ++.+|+|.+|...+..++..........
T Consensus 200 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 279 (467)
T PRK09556 200 IALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDN 279 (467)
T ss_pred HHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 77766554443 454432210 00 000 00000 0111 1 2258899988887776664544445566
Q ss_pred eeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEe
Q 015348 224 TMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLY 303 (408)
Q Consensus 224 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
+.|.|..+.+|++..+.+.......++.+++.++.|+++||+++|+.................. . ......
T Consensus 280 ~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~--~-------~~~~~~ 350 (467)
T PRK09556 280 WSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVY--Q-------HATSEY 350 (467)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH--H-------hcCcHH
Confidence 7777888889999999999988889999999999999999999888765543333222111111 0 011111
Q ss_pred ehhhhHHHHHHHH-HhhhhHHHHHHHhcCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 015348 304 VLIFSSLLEVMFF-FKILPFSVYIAQVCPPGCEGSIMAFVMSAVAL-AFIVSGYLGVALAS 362 (408)
Q Consensus 304 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~l-g~~ig~~~~g~l~~ 362 (408)
......+..++.. ....+......|..|++.+|++.|+.+...++ |..++|.+.|.+.|
T Consensus 351 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 351 MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 1222222233221 21122235667999999999999999999997 77999999999999
No 18
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.9e-31 Score=246.79 Aligned_cols=338 Identities=13% Similarity=0.025 Sum_probs=250.5
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.++++++|.|+.+.+++.+...++..+ ++++|.++|| +|||+.+..+.++..++..++++.+ +++.+++.
T Consensus 18 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 88 (399)
T TIGR00893 18 PMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR-----FGARKTLAVFIVIWGVFTGLQAFAG----AYVSLYIL 88 (399)
T ss_pred HHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh-----cCcceeeHHHHHHHHHHHHHHHHHc----CHHHHHHH
Confidence 347789999999999999999988777 9999999999 9999999999999999999999988 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
|++.|++.+...+...+++.|+.|++ +|++.++..+...++|.++++.+++.+.+..+||+.|++.++..+
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 159 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPAS---------ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGI 159 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHH---------HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 99999999999999999999999875 399999999999999999999999999999999999999888877
Q ss_pred HHHHHhhh-cccccccCCCCCcchh----------------HHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeE
Q 015348 164 LQFFITIA-VRESALKLPKSQSNVG----------------IRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMF 226 (408)
Q Consensus 164 ~~~~~~~~-~~e~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (408)
+..+...+ .||++++++..+++++ .++..++.++.+++|.++...+..++............+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (399)
T TIGR00893 160 IWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFP 239 (399)
T ss_pred HHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 76655444 5555432211100000 000112345567888888777766664555555555666
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHH-HHHHHHHHHHHhHhhhcccccccCcCceEeeh
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISA-IQAMMAVFMISDVLFVKGVYREMGVPDSLYVL 305 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (408)
.|..+..|.++.+.+.......++.+++.++.+++.||+++|+.... .........+........ .......+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 315 (399)
T TIGR00893 240 TYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFA----TNYVNIPYAA 315 (399)
T ss_pred HHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH----hccchhHHHH
Confidence 67777789999999999999999999999999999999998862111 111111110000000000 0111111111
Q ss_pred hhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 306 IFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.......+.+.. ..|. .++.+|..|+++||+++|+.+...+++..++|.+.|.+.|..|
T Consensus 316 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 316 LALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred HHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 212222222223 4455 8899999999999999999999999999999999999998776
No 19
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=8.4e-31 Score=244.96 Aligned_cols=338 Identities=14% Similarity=0.179 Sum_probs=258.8
Q ss_pred chhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh-ccCcchHHH
Q 015348 2 AVNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL-SQSSISIFT 79 (408)
Q Consensus 2 ~~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~ 79 (408)
++++++ .++.-|+..++++..+..+|.++ +++.|.++|| ++||++++.+.++..+....+.+. ..+..++|.
T Consensus 32 a~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr-----~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~ 105 (524)
T PF05977_consen 32 ALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADR-----FDRRRILILSQLLRALVALLLAVLAFFGLLSPWL 105 (524)
T ss_pred HHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----ccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHH
Confidence 456666 46788999999999999999877 9999999999 999999999988876655544432 233457899
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHH
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFG 159 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~ 159 (408)
+++..++.|++.++..|+.++.++|..|+++ ..+++++.+...++..++||.++|.++...|..+.|.+.+
T Consensus 106 Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~---------L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~ina 176 (524)
T PF05977_consen 106 LLILTFLLGIGSAFFNPAWQAIIPELVPKED---------LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINA 176 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHhh---------HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999864 8888999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHh-cccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChh
Q 015348 160 LLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAA-LRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSS 238 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (408)
+..++.......+|.++++++. ++++..+..++-.+. .++|.+...++..++.+..........|.+..+.+|.++.
T Consensus 177 lsfl~~i~~l~~~~~~~~~~~~--~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~ 254 (524)
T PF05977_consen 177 LSFLISILALLRWKPPPPPSSL--PRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGAS 254 (524)
T ss_pred HHHHHHHHHHHHcccccccccc--chhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHH
Confidence 8877766555555543322221 112233333333333 4566666555544443433333444566667778999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHh
Q 015348 239 VLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFK 318 (408)
Q Consensus 239 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
.+|++.+..++|+++|.++.+++.+|.++++.+..+.+..++..+. .+...+.+......+..|++...
T Consensus 255 ~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~-----------lal~~~~~~~~~~l~l~G~~~~~ 323 (524)
T PF05977_consen 255 GYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLL-----------LALSPSFWLALIALFLAGAAWII 323 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHH-----------HhcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888887777666655443 22223333444455555665544
Q ss_pred hhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 319 ILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 319 ~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
.... ++.+++.+|++.+|+++|++++....+..+|..+.|.+.+..|..
T Consensus 324 ~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~ 373 (524)
T PF05977_consen 324 ANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVR 373 (524)
T ss_pred HHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 4444 889999999999999999999999999999999999999998864
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6.5e-31 Score=238.40 Aligned_cols=319 Identities=10% Similarity=0.033 Sum_probs=221.8
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
..+++|+|+|+.|.|++.+.+.+++.+ +++.|+++|| +|||+++..+......+.......+ +++.+++.
T Consensus 15 p~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-----~grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~ 85 (368)
T TIGR00903 15 SLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDR-----AFKRWFLFGSLATFAAAAGRLLDPF----NYEWLLAC 85 (368)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----ccchHHHHHHHHHHHHHHHHHHHhc----cHHHHHHH
Confidence 456789999999999999999988777 8999999999 9999877655544444433223335 89999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
|++.|++.+... ...+.+.|+.|++ +|+++.++.+.+.++|.++++.+++++.+.+|||+.|.+.+++.+
T Consensus 86 R~l~G~g~~~~~-~~~~~~~~~~~~~---------~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~ 155 (368)
T TIGR00903 86 QLLAALGQPFLL-NAFAPAASQIREE---------RRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAA 155 (368)
T ss_pred HHHHHhHhHHHH-HHHHHHHHHcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 999999999754 4446678998864 499999999999999999999999999999999999999888877
Q ss_pred HHHHHh-hhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHH
Q 015348 164 LQFFIT-IAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGI 242 (408)
Q Consensus 164 ~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 242 (408)
+..+.+ +++||+|+++++..+ .++..++.++.++||.+|...+..++.........++.|.|+.+ .|++.. .+.
T Consensus 156 ~~~~~~~~~lp~~p~~~~~~~~---~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~ 230 (368)
T TIGR00903 156 AGIILVLAALPALPFQAAEGFG---FKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGD 230 (368)
T ss_pred HHHHHHHHHcCCCCCCCCCCcc---hHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHH
Confidence 765544 458887654322111 11223456677999999998887777666666667788888854 677765 555
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCC---ceehHH-HHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHh
Q 015348 243 SKVFGQAAMLLWGVIYNSGLKSVSP---RKLISA-IQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFK 318 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
...+..+.+.++. +++.||..+ |+.... .....++.... .. ...............++....
T Consensus 231 ~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~-~~----------~~~~~~~~~~~~~l~~~~~~~ 296 (368)
T TIGR00903 231 AVALAILAGLIGV---AVIPDRVARAGLRSIYIRAAALLIAAFFLA-LA----------FELNRLALFAFIGIAGLLMLP 296 (368)
T ss_pred HHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHHHHHHHHHHHHHH-HH----------HccccHHHHHHHHHHHHhhhh
Confidence 5555555555554 455555543 333222 22222221111 00 001111112222222233333
Q ss_pred hhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 319 ILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 319 ~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
..+. +++.+|..|++.||++.|+.+...++++.++|.+.+.+.
T Consensus 297 ~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 297 AYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred hHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 3343 778999999999999999999999999999998888777
No 21
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.98 E-value=6.8e-31 Score=245.43 Aligned_cols=335 Identities=12% Similarity=0.112 Sum_probs=238.0
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
...+++++|+|+.+.+++.+...++..+ ++++|+++|| +|||+++..+.+..+++.+++.+.+ +++.+++
T Consensus 41 ~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr-----~g~r~~l~~~~~~~~~~~~~~~~~~----~~~~l~~ 111 (426)
T PRK12307 41 MYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK-----FGRKPLMMWSIVAYSVGTGLSGLAS----GVIMLTL 111 (426)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCChHHHHHHHHHHHHHHHHHHHHh----HHHHHHH
Confidence 3456789999999999999999988877 9999999999 9999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
.|++.|++.+...+...+++.|+.|+++ |+++.++...+.++|.++++.+.+.+.+..+||+.|++.....
T Consensus 112 ~r~l~G~g~g~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~ 182 (426)
T PRK12307 112 SRFIVGMGMAGEYACASTYAVESWPKHL---------KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPV 182 (426)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCHhH---------hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHH
Confidence 9999999999999888899999998754 9999999999999999999999999988899999998855433
Q ss_pred HHHHHHhhhcccccccCCC--CCc----chhHHHHHHHHHHhcccchhHHHHHHHHhhhc---ccccccceeEEEEEecc
Q 015348 163 VLQFFITIAVRESALKLPK--SQS----NVGIRAQLSELSAALRKPEIMYSVAWFAASYS---IIPVLTGTMFFYQTQNL 233 (408)
Q Consensus 163 ~~~~~~~~~~~e~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 233 (408)
++........||+++.+++ +++ +...++...+.++.+++|.++........... .........+.|..+ .
T Consensus 183 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 261 (426)
T PRK12307 183 LLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-E 261 (426)
T ss_pred HHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c
Confidence 3322222224444321100 000 00111111234556777776554332222111 111123334444443 6
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHH
Q 015348 234 KIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEV 313 (408)
Q Consensus 234 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
|+++...+.......++.+++.++.+++.||+++|+.+..+.+...+..+.... . ............+..+
T Consensus 262 g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~ 332 (426)
T PRK12307 262 GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFR--------I-PQDNYLLLGACLFGLM 332 (426)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH--------H-ccccHHHHHHHHHHHH
Confidence 889989998888889999999999999999999998877666555443322111 0 0011111111111111
Q ss_pred HHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 314 MFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 314 ~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.......+. ..++.|..|++.+|++.|+.+...++++.++|.+.|++.+..|.
T Consensus 333 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~ 386 (426)
T PRK12307 333 ATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGL 386 (426)
T ss_pred HhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccH
Confidence 111122233 56778999999999999999999999999999999999998764
No 22
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.98 E-value=2.9e-30 Score=239.48 Aligned_cols=331 Identities=15% Similarity=0.074 Sum_probs=244.6
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+++++|.|+.+.++..+...++..+ +++.|.++|| +|||+++..+.....++.+.+.+.+ +++.+++.|+
T Consensus 39 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr-----~g~r~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~~~ 109 (406)
T PRK15402 39 VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR-----IGRRPVMLAGVAFFILTCLAILLAQ----SIEQFTLLRF 109 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCChHHHHHHHHHHHHHHHHHHHHc----cHHHHHHHHH
Confidence 5689999999999999998888777 8999999999 9999999999999999998888888 8999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
+.|++.+...+...+.+.|..|+++ |.+..+.......+|..+||.+++.+.+..+||+.|++.++..++.
T Consensus 110 l~G~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~ 180 (406)
T PRK15402 110 LQGIGLCFIGAVGYAAIQESFEEAD---------AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALS 180 (406)
T ss_pred HHHhHhhhHHHHHHHHHHHHhChhH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHH
Confidence 9999999888888889999988753 7788888888888999999999999999899999999988887776
Q ss_pred HHHhh-hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHH
Q 015348 166 FFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISK 244 (408)
Q Consensus 166 ~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 244 (408)
.+... ..||++++++++ .+.++..++.++.++||.++...+...+............+.+..+++|.++.+.+...
T Consensus 181 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~ 257 (406)
T PRK15402 181 FFGLWRAMPETAGRVGEK---LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQ 257 (406)
T ss_pred HHHHHHhCCCCCcccccc---ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHH
Confidence 55443 467664332221 11223344555668999887766655443322222223345555666899999999887
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-H
Q 015348 245 VFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-S 323 (408)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 323 (408)
....++.+++.++.+++.||+++|+.+..+.....+.......... .....++.........+++.....|. .
T Consensus 258 ~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~g~g~~~~~~~~~ 331 (406)
T PRK15402 258 VPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATV------ISSHAYLWLTAGLSLYAFGIGLANAGLY 331 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH------cccccHHHHHHHHHHHHHHHHHHhhhHH
Confidence 7777888999999999999999998877766555444333211000 00112222334444555555544444 4
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 324 VYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 324 ~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
... ...+++++|++.+..+....++..+|+.+.+.+.+..+
T Consensus 332 ~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 332 RLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred HHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 433 34455899999999999999999999999999877655
No 23
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.98 E-value=1.1e-30 Score=240.82 Aligned_cols=325 Identities=17% Similarity=0.143 Sum_probs=236.1
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.|+++++|.|+.++|++.+...++..+ +++.|+++|| +|||+.+..+.+...++.+.+.+.+ +++.++
T Consensus 33 ~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-----~g~k~~l~~~~~~~~~~~~~~~~~~----~~~~l~ 103 (400)
T PRK11646 33 ISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-----FGAKPMIVTGMLMRAAGFATMAIAH----EPWLLW 103 (400)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-----hCchHHHHHHHHHHHHHHHHHHHhc----cHHHHH
Confidence 35678899999999999999998876665 8999999999 9999999999999999999998888 899999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
+.|++.|++.+...+...+++.|..|++ +|++++++.+...++|..+||.+++.+. .+|||+.|++.+..
T Consensus 104 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~---------~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~ 173 (400)
T PRK11646 104 LSCILSGLGGTLFDPPRTALVIKLIRPH---------QRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVL 173 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 9999999999999998889999999875 3999999999999999999999999998 67999999998877
Q ss_pred HHHHHHH-hhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhH
Q 015348 162 VVLQFFI-TIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVL 240 (408)
Q Consensus 162 ~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (408)
.++..+. .++.||+++++. +++.++ +.++.+++|.++...+..+.............|.|.++..+ ++.+.
T Consensus 174 ~~~~~i~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~ 245 (400)
T PRK11646 174 FVLAAAFNAWLLPAYKLSTV----RTPVRE---GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAV 245 (400)
T ss_pred HHHHHHHHHHhCCccccccc----chhhHH---HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHH
Confidence 7665444 334555322111 112222 33455788887665444333222221222345555554444 67788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhh
Q 015348 241 GISKVFGQAAMLLWGVIYNSGLK-SVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKI 319 (408)
Q Consensus 241 g~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (408)
+.+.....+....+....+++.| |++.++.+..+..+.++...... ..+..+.........+.+....
T Consensus 246 g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~l~~~g~~~~ 314 (400)
T PRK11646 246 KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIG-----------MVSNLQQLFTLICLFYIGSIIA 314 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-----------HhhhHHHHHHHHHHHHHHHHHH
Confidence 88877777766655555566554 45555555555444443332211 1111112233334445555555
Q ss_pred hhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 320 LPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 320 ~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.|. .+++.+..|++++|+++|+.+...++|..+||.++|.+.|+.+
T Consensus 315 ~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 315 EPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 566 7888999999999999999999999999999999999999864
No 24
>PRK10504 putative transporter; Provisional
Probab=99.98 E-value=6.4e-31 Score=248.62 Aligned_cols=335 Identities=15% Similarity=0.099 Sum_probs=249.4
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+.+++|.|+.+.+++.+...++..+ .+++|+++|| +|||+.++.+..+..++.+.+.+.+ +++.+++.|+
T Consensus 36 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~ 106 (471)
T PRK10504 36 MAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-----VGVRNIFFTAIVLFTLGSLFCALSG----TLNELLLARV 106 (471)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hchHHHHHHHHHHHHHHHHHHHHhC----CHHHHHHHHH
Confidence 3468999999999999888877665 8999999999 9999999999888888888888877 8999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
++|++.+...+...+.+.|..|++ +|++..+..+...++|..+||.+++.+.++.|||+.|.+......+.
T Consensus 107 l~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~ 177 (471)
T PRK10504 107 LQGVGGAMMVPVGRLTVMKIVPRE---------QYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIG 177 (471)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCHH---------HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 999999999998889999998865 38999999999999999999999999999999999999987776666
Q ss_pred HHHhhh-cccccccCCCCCcc-------------------hh--H---------------------HHHH----HHHHHh
Q 015348 166 FFITIA-VRESALKLPKSQSN-------------------VG--I---------------------RAQL----SELSAA 198 (408)
Q Consensus 166 ~~~~~~-~~e~~~~~~~~~~~-------------------~~--~---------------------~~~~----~~~~~~ 198 (408)
.+.... .|+++.++.+.+.. +. . ++.. ....+.
T Consensus 178 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (471)
T PRK10504 178 AIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKL 257 (471)
T ss_pred HHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHH
Confidence 554443 44432221110000 00 0 0000 001235
Q ss_pred cccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHH
Q 015348 199 LRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMM 278 (408)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 278 (408)
+|||.++..+...++............++|.++..|.++.+.++......++.+++.++.+++.||+++|+.+..+....
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~ 337 (471)
T PRK10504 258 FRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGL 337 (471)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 78888777766666644443333444556666668999999999998888889999899999999999999888777666
Q ss_pred HHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 015348 279 AVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLG 357 (408)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~ 357 (408)
.+....... .......+......+..+++.+...+. +.+..+..|++.+|+.+|+.+...++|..+|+.++
T Consensus 338 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 338 ALVSLLFML--------VALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred HHHHHHHHh--------ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 555433221 111111111222333444554444444 78888999999999999999999999999999999
Q ss_pred HHHHHhcCCC
Q 015348 358 VALASYTGVT 367 (408)
Q Consensus 358 g~l~~~~g~~ 367 (408)
|.+.+..|..
T Consensus 410 g~ll~~~g~~ 419 (471)
T PRK10504 410 GLLLGLFGQQ 419 (471)
T ss_pred HHHHHHhhhh
Confidence 9999988764
No 25
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.98 E-value=5.9e-30 Score=241.31 Aligned_cols=342 Identities=11% Similarity=0.117 Sum_probs=239.9
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchh-HHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVP-YIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
+.++ ++.|.|..++|.+ +....++..++++|+++||++..+.|||| ++..+.+..+++...+++.+. ..+++.+.+
T Consensus 36 ~~~l-~~~g~~~~~ig~~-~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~-~~~l~~l~~ 112 (491)
T PRK11010 36 QAWM-TVENIDLKTIGFF-SLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEP-GTQLRWLAA 112 (491)
T ss_pred HHHH-HhCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCC-cchHHHHHH
Confidence 4455 5569999999997 44555667799999999994322226666 677888888888777777542 236888899
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh-cCChhhHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-RFSPPSMFLFFGLL 161 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-~~g~~~~f~i~~~~ 161 (408)
.+++.+++.+..++..+++..|+.|++ +|++..++...+..+|.++++.+++++.+ ..|||..|++.++.
T Consensus 113 ~~~l~~~~~a~~~i~~~a~~~~~~~~~---------~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l 183 (491)
T PRK11010 113 LAVVIAFCSASQDIVFDAWKTDVLPAE---------ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAAL 183 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChh---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHH
Confidence 999999999999999999999999875 49999999999999999999999999988 57999999999888
Q ss_pred HHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHH
Q 015348 162 VVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLG 241 (408)
Q Consensus 162 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 241 (408)
.++..+..+++||++++++++ ++. .++..+++++.++++..+...+..++..........+.++|+.++.|++.++.+
T Consensus 184 ~ll~~l~~~~~~e~~~~~~~~-~~~-~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g 261 (491)
T PRK11010 184 LIPCIIATLLAPEPTDTIPVP-KTL-EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVG 261 (491)
T ss_pred HHHHHHHHHhcCCCccccccc-cch-hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 777766666678765332111 110 111123344557777766655544442333223334455566667899999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHH-HHhh
Q 015348 242 ISK-VFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMF-FFKI 319 (408)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 319 (408)
... ....++.+++.++.|++.||+++|+.+..+.+..++..+....+.. . ....+.+........+. ....
T Consensus 262 ~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~------~-~~~~~~l~~~~~l~~~~~g~~~ 334 (491)
T PRK11010 262 LVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSI------T-DKNLYSMGAAVFFENLCGGMGT 334 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh------c-cccHHHHHHHHHHHHHHHHHHH
Confidence 987 5667899999999999999999888766555444433222111000 0 01111111122221222 2222
Q ss_pred hhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 320 LPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 320 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+..++..+.+|++.+++.+|+.++..++|..+++.+.|.+.|..|+
T Consensus 335 ~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~ 381 (491)
T PRK11010 335 AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGW 381 (491)
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence 23377888999999999999999999999999999999999998874
No 26
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.98 E-value=2.4e-30 Score=245.13 Aligned_cols=333 Identities=16% Similarity=0.025 Sum_probs=249.2
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+.+|+|.|+++.+++.+.+.+.... .+++|+++|| +|||+.++.+..+..++.+.+++++ +++.+++.|
T Consensus 31 ~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-----~Grk~~l~~~~~~~~~~~~~~~~a~----~~~~li~~r 101 (495)
T PRK14995 31 TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-----IGFKRLLMLGGTLFGLASLAAAFSP----TASWLIATR 101 (495)
T ss_pred HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHH
Confidence 34689999999999999999987766 8999999999 9999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
+++|++.+...+...+.+.+..++++ +|++++++......+|..+||.+++++.++.|||+.|++...+.++
T Consensus 102 ~l~G~g~~~~~~~~~~~l~~~~~~~~--------~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~ 173 (495)
T PRK14995 102 ALLAIGAAMIVPATLAGIRATFTEEK--------QRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLV 173 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 99999999988877777877765443 5999999999999999999999999999999999999998877766
Q ss_pred HHHHh-hhcccccccCCCCCcchhH--------------H-------HH------------------HHHH--------H
Q 015348 165 QFFIT-IAVRESALKLPKSQSNVGI--------------R-------AQ------------------LSEL--------S 196 (408)
Q Consensus 165 ~~~~~-~~~~e~~~~~~~~~~~~~~--------------~-------~~------------------~~~~--------~ 196 (408)
..+.. +++||++++++++.+.... + .. ..+. .
T Consensus 174 ~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~ 253 (495)
T PRK14995 174 VMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDM 253 (495)
T ss_pred HHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCH
Confidence 65443 4467654332211110000 0 00 0010 2
Q ss_pred HhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHH
Q 015348 197 AALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQA 276 (408)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 276 (408)
+.+|+|.+....+..++............+.|.++..|+++.+.|.......++..++.++.|++.||+++|+.+..+..
T Consensus 254 ~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~ 333 (495)
T PRK14995 254 RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMA 333 (495)
T ss_pred HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 45677776655555444333333333445556667789999999999999999999999999999999999887776665
Q ss_pred HHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHH
Q 015348 277 MMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGY 355 (408)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~ 355 (408)
+..+....... .......+......+..+++.+...+. .....+..|+++++.+.++.+...++|..+|+.
T Consensus 334 ~~~~~~~~l~~--------~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~a 405 (495)
T PRK14995 334 LSALSFYGLAM--------TDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIA 405 (495)
T ss_pred HHHHHHHHHHH--------hcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHH
Confidence 55444332111 011111122333455556665544444 778888999999999999999999999999999
Q ss_pred HHHHHHHh
Q 015348 356 LGVALASY 363 (408)
Q Consensus 356 ~~g~l~~~ 363 (408)
+.|.+.+.
T Consensus 406 i~g~i~~~ 413 (495)
T PRK14995 406 IFGLLLSR 413 (495)
T ss_pred HHHHHHHH
Confidence 99988764
No 27
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.98 E-value=5.2e-30 Score=235.79 Aligned_cols=325 Identities=14% Similarity=0.060 Sum_probs=235.7
Q ss_pred hhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 015348 8 KDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLL 86 (408)
Q Consensus 8 ~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (408)
.+|++.|+.+.+++.+.+.+++.+ +|++|+++|| +|||++++.+..+..++.+.+.+.. +. ++.|++
T Consensus 30 ~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-----~grr~vl~~~~~~~~~~~~~~~~~~----~~---~~~r~l 97 (393)
T PRK11195 30 LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-----FPKGRVMFIANGIKLLGCLLMLFGI----HP---LLAYGL 97 (393)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-----cCCchhhHHHHHHHHHHHHHHHHHH----HH---HHHHHH
Confidence 578999999999999999988887 9999999999 9999999999999988888777766 54 678999
Q ss_pred HHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHH
Q 015348 87 SNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQF 166 (408)
Q Consensus 87 ~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~ 166 (408)
+|++.+...|...+++.|+.|+++ |++++++.+...++|.++||.++|++.+. .|+..+.+.+...++..
T Consensus 98 ~G~~~a~~~pa~~a~i~~~~~~~~---------~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 98 VGIGAAAYSPAKYGILTELLPGEK---------LVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAA 167 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999764 99999999999999999999999999885 48888877766655555
Q ss_pred HHhhhcccccccCCCCCcc-h-hHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHH
Q 015348 167 FITIAVRESALKLPKSQSN-V-GIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISK 244 (408)
Q Consensus 167 ~~~~~~~e~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 244 (408)
+....+||++.++++.+++ . ..++..++.+..+++|.+........+.+..........+.|..+.+|.++.+.|...
T Consensus 168 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~ 247 (393)
T PRK11195 168 LFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQ 247 (393)
T ss_pred HHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHH
Confidence 5555678765432221111 1 1222223344557888766544433332222222223334455666899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhh-hhHH
Q 015348 245 VFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKI-LPFS 323 (408)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 323 (408)
....++.+++.++.+++.||.++++.+..+... +....... .....+......+..+++.... .|.+
T Consensus 248 ~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~G~~~g~~~~~~~ 315 (393)
T PRK11195 248 AVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMA-----------LQHSLLPAYPLLILIGALGGFFVVPMN 315 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHH-----------HHhHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 999999999999999999998888776655432 22211100 1111222233344445554433 3457
Q ss_pred HHHHHhcCCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 324 VYIAQVCPPGC-EGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 324 ~~~~~~~p~~~-~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
+..++..|++. +|++.|+.+...+++..++..+.+.+ +..|.+
T Consensus 316 ~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~ 359 (393)
T PRK11195 316 ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVP 359 (393)
T ss_pred HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 77888776665 79999999999999999999998855 566654
No 28
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.98 E-value=5.5e-30 Score=235.33 Aligned_cols=320 Identities=12% Similarity=0.077 Sum_probs=232.4
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+++|+|.|+++.|++.+...++..+ +|++|+++|| +|||+++..+..+.+++.+++++++ +++.+++.|
T Consensus 28 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~l~~~~~----~~~~l~~~r 98 (382)
T PRK10091 28 ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-----YSLKHILLFLVALCVIGNAMFTLSS----SYLMLAIGR 98 (382)
T ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-----CccHHHHHHHHHHHHHHHHHHHHhC----cHHHHHHHH
Confidence 46789999999999999999988877 9999999999 9999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+...+.+.|+.+++ +|+++++....+..+|..++|.+++.+.+..+||+.|++.++..++
T Consensus 99 ~l~G~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 169 (382)
T PRK10091 99 LVSGFPHGAFFGVGAIVLSKIIKPG---------KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIA 169 (382)
T ss_pred HHHHhhhHHHHHHHHHHHHHhCChH---------HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHH
Confidence 9999999988888878888887764 3888999999999999999999999999999999999999887766
Q ss_pred HHHHh-hhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHH
Q 015348 165 QFFIT-IAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGIS 243 (408)
Q Consensus 165 ~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 243 (408)
..+.. ..+||++++++. +.++. .+.+|++..+......++............+++..+..|+++.+.+.+
T Consensus 170 ~~~~~~~~lp~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 240 (382)
T PRK10091 170 VLASIYFWVPDIRDEAKG-----GLREQ----FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFI 240 (382)
T ss_pred HHHHHHHhCCCCCccccc-----CHHHH----HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 65443 347775432111 12222 234677776665544433222221222233445556689999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhh-hhH
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKI-LPF 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 322 (408)
.....++.+++.++.+++.||+++|+.+..+..+.++..+..... .+..+.........+.+.... .|.
T Consensus 241 ~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~ 310 (382)
T PRK10091 241 MMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF----------GGMKTASLIFAFICCAGLFALSAPL 310 (382)
T ss_pred HHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHH----------HhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 999999999999999999999999988877766555543332110 011111222222223332222 233
Q ss_pred H-HHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015348 323 S-VYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYT 364 (408)
Q Consensus 323 ~-~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~ 364 (408)
. ....+..|++.++... .+...++|..+||.++|.+.|..
T Consensus 311 ~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~ 351 (382)
T PRK10091 311 QILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLG 351 (382)
T ss_pred HHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcc
Confidence 3 3344444555555543 46778999999999999999863
No 29
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=7.9e-32 Score=245.36 Aligned_cols=324 Identities=19% Similarity=0.241 Sum_probs=242.0
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.++++++|.|+.+++++.+...++..+ +++.|+++|| +|||+++..+.++.+++.+...+++ +.+.+++.
T Consensus 21 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-----~g~r~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~ 91 (352)
T PF07690_consen 21 LYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-----FGRRRVLIIGLLLFALGSLLLAFAS----NFWLLLIA 91 (352)
T ss_dssp -HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-----S-HHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHH
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCeeeEeehhhhhhhHHHHhhhhh----hHHHHhhh
Confidence 377899999999999999999977666 9999999999 9999999999999999866666656 77799999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
|++.|++.+...+...+++.|+.|+++ |++.++..+...++|.+++|.+++.+.+..+||+.|++.++..+
T Consensus 92 ~~l~g~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~ 162 (352)
T PF07690_consen 92 RFLLGIGSGFFSPASNALIADWFPPEE---------RGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSL 162 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCTCC---------HHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhh---------hhhccccccchhhhhhhcccchhhhhhhccccccccccccchhh
Confidence 999999999999999999999999854 99999999999999999999999999988999999999999988
Q ss_pred HHHHHh-hhcccccccCCCCCcchh---HHHHHHH-HHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCC-h
Q 015348 164 LQFFIT-IAVRESALKLPKSQSNVG---IRAQLSE-LSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIR-S 237 (408)
Q Consensus 164 ~~~~~~-~~~~e~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~ 237 (408)
+..++. .+.+++++++++++++++ .++..++ .+...++|.+|......+.............+.|..+.+|.+ .
T Consensus 163 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (352)
T PF07690_consen 163 IAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGP 242 (352)
T ss_dssp HHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTH
T ss_pred hhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHH
Confidence 886643 344444433332222222 2222233 344466676663333333323333345555566667888999 7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
.+.+.......+..+++.++.+++.||+++++..........+........ .............+..+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~ 314 (352)
T PF07690_consen 243 SQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLL--------PFSSSPVWLIIALFLIGFGFG 314 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCS--------HHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH--------HHhhhHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999998777666655555444332210 011111123334455566666
Q ss_pred hhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHH
Q 015348 318 KILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSG 354 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~ 354 (408)
...|. .++.++..|++++|++.|+.+...+++..+||
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 315 IVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 56666 88999999999999999999999999999987
No 30
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=3.1e-30 Score=238.81 Aligned_cols=324 Identities=15% Similarity=0.103 Sum_probs=223.0
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC----cchH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS----SISI 77 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~ 77 (408)
++.++++++|.|+.+.|++.+...+++.+ +|+.|.++|| +|||+++..+.++.+++.+.+.+.... ..++
T Consensus 38 l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-----~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (399)
T PRK05122 38 LPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT-----LGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSL 112 (399)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc-----cCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHH
Confidence 45678899999999999999999988777 9999999999 999999999998887776655443211 1256
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHH
Q 015348 78 FTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLF 157 (408)
Q Consensus 78 ~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i 157 (408)
+.+++.|++.|++.+...+...+++.|..|+++ |++++++.....++|.++|+.+++.+.+..||+..+++
T Consensus 113 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 183 (399)
T PRK05122 113 LLLLLGRLLLGIGESLAGTGSILWGIGRVGALH---------TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLL 183 (399)
T ss_pred HHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh---------hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 788999999999999999988888999987754 89999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCCh
Q 015348 158 FGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRS 237 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (408)
..+..++..+.....||++++ + +++.+.++..++. +++. ....+............+.|.. +.|.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 248 (399)
T PRK05122 184 IMLLALLGLLLARPRPAVPPV--K-GERLPFRRVLGRV---WPYG------MGLALASIGFGTIATFITLYYA-ARGW-- 248 (399)
T ss_pred HHHHHHHHHHHHhcCCCCCCC--C-ccchhHHHHHHHH---HHHH------HHHHHHHHHHHHHHHHHHHHHH-Hccc--
Confidence 766554443332223332211 1 1111122212111 1111 1111101111111112222222 2344
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
...+.......++.+++.++.+++.||+++|+.+..+.....+....... ..+.+......+..+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~G~~~~ 317 (399)
T PRK05122 249 DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL-----------APSPWMALIGAALTGFGFS 317 (399)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-----------hccHHHHHHHHHHHHHhHH
Confidence 23455566777888899999999999999988877666555544333211 1111223334455566555
Q ss_pred hhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 318 KILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
...|. .....+..|++++|+++|+++...++|..+++.+.|.+.+..|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 367 (399)
T PRK05122 318 LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGY 367 (399)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 55555 66778899999999999999999999999999999999998764
No 31
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.7e-29 Score=227.10 Aligned_cols=348 Identities=14% Similarity=0.185 Sum_probs=278.8
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC--cchHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS--SISIFT 79 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 79 (408)
+.+|++|..|+|+..+|.+..+.. +..+..|+.|.++||+++|+.+|||+++.+.+..++...++..+++. ..+...
T Consensus 35 Ll~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~y 114 (467)
T COG2211 35 LLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIY 114 (467)
T ss_pred HHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHH
Confidence 578899999999999999999988 56667999999999999999999999999999999999998888742 246777
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------CChh
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-------FSPP 152 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-------~g~~ 152 (408)
..+..++.++++...+.+..++.++++++.+ +|.+..++.+...++|..+...+...+.+. .||+
T Consensus 115 a~vtY~l~~l~YT~vniPy~al~~~iT~d~~--------ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~ 186 (467)
T COG2211 115 ALVTYMLLGLGYTLVNIPYGALGPEITQDPQ--------ERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQ 186 (467)
T ss_pred HHHHHHHHHHHHHheeCchhhcchhhcCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHH
Confidence 7888999999999999999999999999876 699999999999999988777666655532 5788
Q ss_pred hHHHHHHHHHHHHHHHhhh-cccccccCCCCC--cchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEE
Q 015348 153 SMFLFFGLLVVLQFFITIA-VRESALKLPKSQ--SNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQ 229 (408)
Q Consensus 153 ~~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (408)
....+.+++.++..+.+++ ++|+..+..+.+ .+.+.++. +...++||+++..++..++.+...........+|.
T Consensus 187 ~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~---~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~ 263 (467)
T COG2211 187 GTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDS---FLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYV 263 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHH---HHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeE
Confidence 8888888888887777666 888765443322 12223322 33358999988888877776667777777788888
Q ss_pred EeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhH
Q 015348 230 TQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSS 309 (408)
Q Consensus 230 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
+..+|.+.............+.+++.++..++.+|+|+|+++.++.++..+......+ .+ +++....+...
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f--------~~-~~~~~l~~~~~ 334 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYF--------TP-AGSVVLIVVAL 334 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHh--------hc-CcchHHHHHHH
Confidence 8889988888888888888888888999999999999999999998887777666443 22 23333444445
Q ss_pred HHHHHHHHhhhhH-HHHHHHhcC-------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 015348 310 LLEVMFFFKILPF-SVYIAQVCP-------PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDD 370 (408)
Q Consensus 310 ~~~~~~~~~~~~~-~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~ 370 (408)
+..+++.....+. +++++|..+ .+.+|..+|..+.+..+|..++..+.|++.+..|+.++.
T Consensus 335 ~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~ 403 (467)
T COG2211 335 IIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPNV 403 (467)
T ss_pred HHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 5666666666666 777777654 467899999999999999999999999999999987665
No 32
>PRK09669 putative symporter YagG; Provisional
Probab=99.97 E-value=3.6e-29 Score=234.37 Aligned_cols=375 Identities=15% Similarity=0.160 Sum_probs=256.0
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcc-cccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC--cchHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANL-PMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS--SISIFT 79 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~-~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 79 (408)
+.+|+++++|+|+.++|.+.++..+ ..+.+|+.|.++||+++|+.+|||+++.+.+..+++..++...+.. ....++
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~ 111 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIY 111 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 5688999999999999999999994 5566999999999999988888999999988888887766655521 223566
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh-------cCChh
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-------RFSPP 152 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~g~~ 152 (408)
+++...+.+.+.+...++..++.+|+.++++ +|++..++.....++|..+++.+...+.. ..+|+
T Consensus 112 ~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~--------eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~ 183 (444)
T PRK09669 112 ACVTYILLSLVYTAINVPYCAMPGAITNDPR--------ERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYF 183 (444)
T ss_pred HHHHHHHHHHHHHhhcchHHHhHHHhcCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 6777778888888888888899999987755 58999998888888888888765544433 24688
Q ss_pred hHHHHHHHHHHHHHHHhhh-cccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEe
Q 015348 153 SMFLFFGLLVVLQFFITIA-VRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQ 231 (408)
Q Consensus 153 ~~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (408)
..+.+.+++.++..+..++ .||+++++++ ++.+.+ ++.++.+|||.++..+...++.............+|.++
T Consensus 184 ~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~--~~~~~~---~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~ 258 (444)
T PRK09669 184 YAMMVMGLLGVVLFFCCFFMTKERYTPEVD--NSSSVW---KDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNY 258 (444)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEecCCCCc--CCCCHH---HHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeee
Confidence 8888877777666554444 6665433221 112233 344555899998887766655333333333334455555
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHH
Q 015348 232 NLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLL 311 (408)
Q Consensus 232 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
..+ +++..+.......+..+++.++.+++.||+++|+.+..+.....+....... .. ++..+......+.
T Consensus 259 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~i 328 (444)
T PRK09669 259 VLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF--------IP-PSNVWLIFALNIL 328 (444)
T ss_pred ecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH--------hC-cchHHHHHHHHHH
Confidence 454 3344455566667888889999999999999998887766554433222111 11 1222233444455
Q ss_pred HHHHHHhhhhH-HHHHHHhcC-------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-Cch-------H
Q 015348 312 EVMFFFKILPF-SVYIAQVCP-------PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDF-SGL-------P 375 (408)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~-~~~-------~ 375 (408)
.+++.....+. +++++|.++ ++.+|..+|..+...++|..+|+.++|.+.+..|++...- ..- .
T Consensus 329 ~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~~~~~~q~~~~~~~i~~ 408 (444)
T PRK09669 329 FNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYVGGAAVQSASVLTTINL 408 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 66666666666 888888875 3456888999999999999999999999999999864311 110 1
Q ss_pred HHHHHHHhhhhhhhhhhhccCCCCC
Q 015348 376 LALIIQAVCTILPLYWSYFMPDGVK 400 (408)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (408)
....+.+++.++.+...++.|-+++
T Consensus 409 ~~~~~p~~~~~~~~~~~~~y~l~~~ 433 (444)
T PRK09669 409 LFTVIPGVLFAGMAIILNFYKLNDA 433 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHH
Confidence 2223334444555555566665443
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=9.1e-30 Score=238.86 Aligned_cols=337 Identities=12% Similarity=0.054 Sum_probs=230.1
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
+++++ |+|+.+.+++.+...+++.+ ++++|+++|| +|||++++.+.++.+++.+.+++.+....+++.+++.|
T Consensus 54 ~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-----~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (452)
T PRK11273 54 YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR-----SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLL 127 (452)
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc-----cCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHH
Confidence 56677 99999999999999988877 9999999999 99999999999999988888877542223678889999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHH-HHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGG-VLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~-~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
++.|++.+...+.....+.++.|++ +|++.+++.+.+.++|. +.+|+++..+....+||+.|++.+++.+
T Consensus 128 ~l~gi~~g~~~~~~~~~~~~~~~~~---------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 128 FLCGWFQGMGWPPCGRTMVHWWSQK---------ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI 198 (452)
T ss_pred HHHHHHHhccchHHHHHHHHhCChH---------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 9999999988887778888888765 49999999999999886 4556554444344599999999887776
Q ss_pred HHHH-HhhhcccccccCC---CC----C------cchhHHHHHHHH--HHhcccchhHHHHHHHHhhhcccccccceeEE
Q 015348 164 LQFF-ITIAVRESALKLP---KS----Q------SNVGIRAQLSEL--SAALRKPEIMYSVAWFAASYSIIPVLTGTMFF 227 (408)
Q Consensus 164 ~~~~-~~~~~~e~~~~~~---~~----~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (408)
+..+ ..+++||++++.. ++ + ++++.+...++. ...+|+|.+|...+..++..........+.|.
T Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~ 278 (452)
T PRK11273 199 LVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPT 278 (452)
T ss_pred HHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6544 4445776543210 00 0 000000011221 23578888888776666644444445567777
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCC--CceehHHH-HHHHHHHHHHhHhhhcccccccCcCceEee
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVS--PRKLISAI-QAMMAVFMISDVLFVKGVYREMGVPDSLYV 304 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (408)
|..++.|++..+.+.......++.+++.++.|++.||++ +|+..... ..+..+.... .. .......+.
T Consensus 279 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~-~~--------~~~~~~~~~ 349 (452)
T PRK11273 279 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV-YW--------LNPAGNPTV 349 (452)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHH-HH--------HhcccChHH
Confidence 888778999888998888888999999999999999984 33322211 1111111111 11 000111111
Q ss_pred hhhhHHHHHHHHHh-hhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCC
Q 015348 305 LIFSSLLEVMFFFK-ILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIV-SGYLGVALASYTGV 366 (408)
Q Consensus 305 ~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~i-g~~~~g~l~~~~g~ 366 (408)
........+..... ......+..|..|++.+|+++|+.+...++++.+ +|.+.|.+.|+.|+
T Consensus 350 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~ 413 (452)
T PRK11273 350 DMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 413 (452)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcc
Confidence 11112222222111 1122456679999999999999999999998765 79999999999874
No 34
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=2.1e-29 Score=232.96 Aligned_cols=339 Identities=13% Similarity=0.119 Sum_probs=232.5
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
+.++ +|+|.|+++.|++.+...++..+ +|+.|+++|| +|||+.+..+..+..++.+++........+++.+++
T Consensus 37 ~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-----~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (402)
T TIGR00897 37 SPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-----IGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILL 110 (402)
T ss_pred HHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-----cCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHH
Confidence 4455 67899999999999999988777 9999999999 999999999998888876654321111127888889
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHH-HHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGG-VLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~-~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
.|++.|++.+...+...+.+.+..|++ +|+++++..+...++|. +++|.+++.+.+..||+..++.....
T Consensus 111 ~~~i~G~g~~~~~~~~~~~~~~~~~~~---------~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 111 FYGIRGLGYPLFAYSFLVWVVYNTKQD---------NLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHcchHHHHhHHHHHHHHhCCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 999999998887777777888887765 49999999999999997 68999999999888977666654443
Q ss_pred HHHHHHHh-hhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhH
Q 015348 162 VVLQFFIT-IAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVL 240 (408)
Q Consensus 162 ~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (408)
..+..+.. ++.+|++++++++ ++++.++..+..++.+|+|.++...+..++..........+.|.|. +++|++..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~ 259 (402)
T TIGR00897 182 VLTGGVIALFSNKDIFTPQHMQ-TREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFV-AELGFSTSEW 259 (402)
T ss_pred HHHHHHHHHhccCCCCCccccc-CCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCChhHH
Confidence 33333332 3344432222111 1111222233345568899888766655553333333444555555 5589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCceehHH-HHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhh
Q 015348 241 GISKVFGQAAMLLWGVIYNSGLKSVSPRKLISA-IQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKI 319 (408)
Q Consensus 241 g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (408)
+.......++++++.+..|++.||+++|+.... +.+...+.......... . .....+......+..+.+....
T Consensus 260 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~-----~-~~~~~~~~~~~~~~~G~~~~~~ 333 (402)
T TIGR00897 260 LQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ-----H-FGHSFAVALIIAIALGIFLAGY 333 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH-----c-cCCcHHHHHHHHHHHHHHHHHH
Confidence 988888889999999999999999998876532 22222222111111000 0 0111122333444455555445
Q ss_pred hhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 320 LPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 320 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.|......+. ++++||+++|+.+...+++..++|.++|.+.|..|.
T Consensus 334 ~~~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~ 379 (402)
T TIGR00897 334 VPLAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGA 379 (402)
T ss_pred HHHHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 5555555665 456899999999999999999999999999998764
No 35
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=3.6e-29 Score=231.06 Aligned_cols=324 Identities=15% Similarity=0.104 Sum_probs=222.8
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh---cc-CcchH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL---SQ-SSISI 77 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~---~~-~~~~~ 77 (408)
++.|+++|+|.|++++|++.+...++..+ +|++|+++|| +|||+.+..+.+...++.+..... +. ...++
T Consensus 38 l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-----~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (392)
T PRK12382 38 IPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ-----YGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKF 112 (392)
T ss_pred hhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh-----hcchHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Confidence 35578899999999999999999988777 9999999999 999999999887776655433221 10 12378
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHH
Q 015348 78 FTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLF 157 (408)
Q Consensus 78 ~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i 157 (408)
+.+++.|+++|++.+...+...+++.|..|++ +|++++++.+.+.+.|..+||.+++.+.+..||+..+.+
T Consensus 113 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~---------~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 183 (392)
T PRK12382 113 ALLVVGRLILGFGESQLLTGALTWGLGLVGPK---------HSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALT 183 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc---------ccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHH
Confidence 88999999999999998888888999998865 499999999999999999999999999999999988776
Q ss_pred HHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCCh
Q 015348 158 FGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRS 237 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (408)
..+..++........||+++++ +++.+.++..+. +.++.+...+ .... ........+.|.. +.|++.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~l-~~~~----~~~~~~~~~~~~~-~~~~~~ 250 (392)
T PRK12382 184 TMVLPLLAWAFNGTVRKVPAHA---GERPSLWSVVGL----IWKPGLGLAL-QGVG----FAVIGTFVSLYFA-SKGWAM 250 (392)
T ss_pred HHHHHHHHHHHHHhccCCCCCc---ccCchHHHHHHH----HHHhHHHHHH-HHHH----HhHHHHHHHHHHH-hcCCch
Confidence 5554433332222234332211 111122222222 2222221111 1111 1111111222222 234433
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
.+.......++.+++.++.+++.||+++|+.+..+..+..+....... ..+.+.........+++..
T Consensus 251 --~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~g~~~~ 317 (392)
T PRK12382 251 --AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL-----------APTAWVALAGAALTGAGCS 317 (392)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH-----------cccHHHHHHHHHHHHHHHH
Confidence 455556677788889999999999999999988777666555433211 1111123334444555555
Q ss_pred hhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 318 KILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
...|. .+...+..|+++||+++|+.++..+++..++|.+.|.+.|+.|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 367 (392)
T PRK12382 318 LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGY 367 (392)
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 55565 67788999999999999999999999999999999999998775
No 36
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=9.1e-30 Score=235.67 Aligned_cols=331 Identities=11% Similarity=0.041 Sum_probs=237.8
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+++|+|.|+.+.|++.+...+.+.+ +++.|+++|| +|||+++..+.++..++.+++++++ +++.+++.|
T Consensus 33 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-----~G~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r 103 (412)
T TIGR02332 33 TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-----IGARRWIAGIMVLWGIASTATMFAT----GPESLYLLR 103 (412)
T ss_pred hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-----hChHHHHHHHHHHHHHHHHHHHHhc----CHHHHHHHH
Confidence 57899999999999999999988777 8999999999 9999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh------cCChhhHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID------RFSPPSMFLFF 158 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~------~~g~~~~f~i~ 158 (408)
++.|++.+...+...+++.|+.|++ +|++..++.+...++|.++++.+++++.+ ..|||+.|.+.
T Consensus 104 ~l~G~~~~~~~~~~~~~~~~~~~~~---------~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~ 174 (412)
T TIGR02332 104 ILVGIAEAGFLPGILLYLTFWFPAY---------FRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLE 174 (412)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHH
Confidence 9999999999888888899999975 39999999999999999999999998864 36999999998
Q ss_pred HHHHHHHHHH-hhhcccccccCC---CCCcch--------------------hHHHHHHHHHHhcccchhHHHHHHHHhh
Q 015348 159 GLLVVLQFFI-TIAVRESALKLP---KSQSNV--------------------GIRAQLSELSAALRKPEIMYSVAWFAAS 214 (408)
Q Consensus 159 ~~~~~~~~~~-~~~~~e~~~~~~---~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (408)
++..++..++ ++++||+|++++ +++++. +.+...+..++..++|.++...+..++.
T Consensus 175 ~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (412)
T TIGR02332 175 GFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCL 254 (412)
T ss_pred HHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHHHHHHH
Confidence 8887766544 445788764321 000000 0000001112223356666655554443
Q ss_pred hcccccccceeEEEEEe-ccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehH-HHHHHHHHHHHHhHhhhccc
Q 015348 215 YSIIPVLTGTMFFYQTQ-NLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLIS-AIQAMMAVFMISDVLFVKGV 292 (408)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 292 (408)
........++.|.++.+ ..|++..+.+.......++.+++.++.+++.||+++|+... ..............
T Consensus 255 ~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~------ 328 (412)
T TIGR02332 255 TNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS------ 328 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH------
Confidence 44444455667777655 24678888898899999999999999999999999776432 22222222211110
Q ss_pred ccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 293 YREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
...+.. .........+.+.....+. .....+..|++++++++|+.+...++|+.++|.+.|.+.|..|
T Consensus 329 ----~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 329 ----ATDHNL-IQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred ----hcCCHH-HHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 011111 1111111112222212232 3444567899999999999999999999999999999998865
No 37
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=1.9e-29 Score=232.23 Aligned_cols=328 Identities=14% Similarity=0.129 Sum_probs=240.4
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.|+++++|.|+.++|++.+...+...+ +|+.|.++|| +|||+++..+.+...++.+.+.+.+ +++.++
T Consensus 30 l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-----~g~k~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 100 (395)
T PRK10054 30 MTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-----FDKKRYMLLAITAFASGFIAIPLVN----NVTLVV 100 (395)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCcchhHHHHHHHHHHHHHHHHHHh----HHHHHH
Confidence 45688899999999999999998866555 9999999999 9999999999998888888888888 888888
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
+.|.+.|.+.+...+...++..|..+++ +|++..++.+...++|.++||.+++.+.+ .+|+..|.+.++.
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~ 170 (395)
T PRK10054 101 LFFALINCAYSVFSTVLKAWFADNLSST---------SKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAIC 170 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHH
Confidence 8898888888877887888888888765 39999999999999999999999999875 6999999998887
Q ss_pred HHHHHHHh-hhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEE--eccCCChh
Q 015348 162 VVLQFFIT-IAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQT--QNLKIRSS 238 (408)
Q Consensus 162 ~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~ 238 (408)
.++..+.. +++||++++++++ + + +. .+.++.+|||.++......++............+.|.. ++.+.+..
T Consensus 171 ~~i~~i~~~~~~~~~~~~~~~~-~-~---~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (395)
T PRK10054 171 SAFPLVFIQIWVQRSEKAIATE-T-G---SV-WSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEK 244 (395)
T ss_pred HHHHHHHHHHHHhccccccccc-h-h---hh-hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHH
Confidence 77765443 3365554322111 1 1 11 22245688888877665554422222111111122211 23456677
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHh
Q 015348 239 VLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFK 318 (408)
Q Consensus 239 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
..+.......+......+..+++.||.++|+.+..+..+..+....... . .+..+.........+++...
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~g~~~ 314 (395)
T PRK10054 245 VVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIF---------S-GNSLLLWGMSAAVFTVGEII 314 (395)
T ss_pred HHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHH---------c-chHHHHHHHHHHHHHHHHHH
Confidence 7787777777777777888899999999988877776555544333211 0 11222333445566666666
Q ss_pred hhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 319 ILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 319 ~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..|. .+.+.+..|++.++++++..+ ...+|..+||.++|.+.|+.|.
T Consensus 315 ~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~ 362 (395)
T PRK10054 315 YAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPP 362 (395)
T ss_pred HHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcCh
Confidence 6677 778899999999999998754 6779999999999999999875
No 38
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=3.1e-30 Score=237.20 Aligned_cols=339 Identities=16% Similarity=0.142 Sum_probs=244.6
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.++++++|.|+.+.|++.+...++..+ +++.|+++|| +|||+.+..+..+..++.+++.+.+ +++.+++.
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 89 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDR-----SNPRVFLPIGLILCAIVNLFFGFST----SLWVMAAL 89 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHh-----hCCeehhHHHHHHHHHHHHHHHHhh----hHHHHHHH
Confidence 467789999999999999999987777 9999999999 9999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHH-HHHHHHhhcCChhhHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGN-LLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~-~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
|++.|++.+...+...+++.|+.|+++ |++..++.+...++|..+++ .+++.+.+..+||+.|++.+++.
T Consensus 90 ~~~~g~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 90 WALNGIFQGMGWPPCGRTVTKWFSRSE---------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred HHHHHhhccccCCchHHHHHHhcCHhh---------heeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 999999999999999999999998754 88889999999999999999 57777778889999999888777
Q ss_pred HHHHHHh-hhcccccccCCC-------CCc-------c-hhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeE
Q 015348 163 VLQFFIT-IAVRESALKLPK-------SQS-------N-VGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMF 226 (408)
Q Consensus 163 ~~~~~~~-~~~~e~~~~~~~-------~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (408)
++..+.. ++.||++++++. +++ + ++.++.....++.+++|.++...+..++..........+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSP 240 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654443 346654332110 000 0 00011112234557888888776666554444444455566
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
.|..+..|+++.+.+.......++.+++.++.+++.||..+++..................+ . ...........
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~ 314 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY-W-----LNPAANPLMDL 314 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-h-----cCcchhHHHHH
Confidence 67777789999999999999999999999999999998643332222222111111111100 0 00001111122
Q ss_pred hhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 307 FSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
...+..+.......+. .....|..|+++||++.|+.+...+++..++|.+.|.+.|..|++
T Consensus 315 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 376 (379)
T TIGR00881 315 ICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWA 376 (379)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccc
Confidence 2222333322222233 567889999999999999999999999999999999999988864
No 39
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=7.7e-29 Score=228.58 Aligned_cols=326 Identities=18% Similarity=0.199 Sum_probs=242.3
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+++++|.|+++.+++.+...++..+ ++++|+++|| +|||+++..+.++..++.+.+.+.+ +++.+++.|
T Consensus 30 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 100 (385)
T TIGR00710 30 EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR-----YGRRPVLLLGLFIFALSSLGLALSN----NIETLLVLR 100 (385)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-----cCChHHHHHHHHHHHHHHHHHHHHc----cHHHHHHHH
Confidence 46789999999999999999987777 9999999999 9999999999999999999998888 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+..++++.|+.|++ +|++.++..+...++|..+++.+++.+.+..+||..|++.++..++
T Consensus 101 ~l~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 171 (385)
T TIGR00710 101 FVQAFGASAGSVISQALVRDIYPGE---------ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGIL 171 (385)
T ss_pred HHHHcchhHHHHHHHHHHHHhcCcH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999865 4999999999999999999999999999999999999998887776
Q ss_pred HHHHhh-hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHH
Q 015348 165 QFFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGIS 243 (408)
Q Consensus 165 ~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 243 (408)
..+... +.||+++++++ ++.++..++.++.+|+|.++...+...+............+.+..++.|.++.+.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 247 (385)
T TIGR00710 172 LSALIFFILPETLPYEAR----IQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLL 247 (385)
T ss_pred HHHHHHHhCCCCCCCccc----CCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHH
Confidence 655444 46665443322 1123334455566888888876655544333333334444555666789999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF- 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (408)
.....++.+++.++.+++.||+++|+.+..+.....+.......... . ...............+++.....+.
T Consensus 248 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (385)
T TIGR00710 248 FALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAI-----L-GLGSWAMIIGPMMFVGIGNSMISSIA 321 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-----h-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877765555544333211000 0 0011112222334444555444555
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 323 SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 323 ~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
.....|..| ++++++.++.+.....++.+.+.+.+.+
T Consensus 322 ~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 322 MAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 556666665 6789999999888776555555545533
No 40
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=7.2e-29 Score=229.09 Aligned_cols=324 Identities=16% Similarity=0.136 Sum_probs=232.1
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+.+++|.|+.+.++..+...++..+ +|+.|+++|| +|||+++..+.+...++...+...+ +++.+++.|
T Consensus 28 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-----~g~r~~l~~~~~~~~i~~~~~~~~~----~~~~~~~~~ 98 (392)
T PRK10473 28 RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-----SGRKPVAIPGAALFIIASLLCSLAE----TSSLFLAGR 98 (392)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-----hCChHHHHHHHHHHHHHHHHHHHhC----cHHHHHHHH
Confidence 35688999999999999999988777 8999999999 9999999999999999999888888 889999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+...+++.|..|+++ |++..+..+...++|..++|.+++.+.+..+||+.|++.+...++
T Consensus 99 ~l~g~~~~~~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i 169 (392)
T PRK10473 99 FLQGIGAGCCYVVAFAILRDTLDDRR---------RAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGIL 169 (392)
T ss_pred HHHHhhhhHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHH
Confidence 99999999988888899999988753 999999999999999999999999988889999999998887776
Q ss_pred HHHHh-hhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHH
Q 015348 165 QFFIT-IAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGIS 243 (408)
Q Consensus 165 ~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 243 (408)
..+.. ..+||++++++++ + .+ ..++.++.++||.++...+...+............+.+..+++|+++.+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 244 (392)
T PRK10473 170 VLLLSLFILKETRPARAPA-A-SS---KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAII 244 (392)
T ss_pred HHHHHHHHcCCCCCcccCC-c-cc---hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHH
Confidence 65544 4467765433221 1 11 12233455778876655444333222222223333445556789999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhHH
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPFS 323 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (408)
.....++.+++.++.+++.||+++|+.+..+.....+........ .... ...........+.....+ .
T Consensus 245 ~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~~l~~~g~~~~~~-~ 312 (392)
T PRK10473 245 MALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALS---------PSHA--VSLFGITLICAGFSVGFG-V 312 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH---------HHHH--HHHHHHHHHHHHHHHHhH-H
Confidence 999999999999999999999999988877766555443332210 0011 111111111122111111 2
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 324 VYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 324 ~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
....+..|.++++ |..++..+++..+++.+++++.++.|..
T Consensus 313 ~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~ 353 (392)
T PRK10473 313 AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGIS 353 (392)
T ss_pred HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3445556655543 4445566788888999999999988753
No 41
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=2.5e-29 Score=231.94 Aligned_cols=326 Identities=12% Similarity=0.078 Sum_probs=236.5
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+++++|+|+++.+++.+...+++.+ +++.|+++|| +|||+.+..+.++..++.+++.+.+ +++.+++.|
T Consensus 32 ~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-----~g~r~~~~~~~~~~~i~~~l~~~~~----~~~~~~~~~ 102 (394)
T PRK03699 32 PIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-----IPLKRQLIFGFALMILAVAGLMFSH----SLALFSIAM 102 (394)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHcc----hHHHHHHHH
Confidence 45689999999999999999888777 8999999999 9999999999999999999988888 899999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh-cCChhhHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-RFSPPSMFLFFGLLVV 163 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-~~g~~~~f~i~~~~~~ 163 (408)
++.|++.+...+...+.+.|..|++ +|++..+..+...++|..++|.+.+.+.+ ..|||+.|.+.+++.+
T Consensus 103 ~l~G~~~g~~~~~~~~~i~~~~~~~---------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~ 173 (394)
T PRK03699 103 FVLGVVSGITMSIGTFLITHVYEGK---------QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYV 173 (394)
T ss_pred HHHHHhhHhhccchhHHhhhhcccc---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 9999999998888889999998764 48888888888888999999998888764 5799999998888776
Q ss_pred HHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHH
Q 015348 164 LQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGIS 243 (408)
Q Consensus 164 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 243 (408)
+..+..++.+.++.++++++++ ++..++ ..++.++...+..++..........+.|.|..+.+|+|+.+.+..
T Consensus 174 ~~~~~~~~~~~p~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~ 246 (394)
T PRK03699 174 AIFILTLFSEFPALGKHAPKAD---KPVAKE----KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNL 246 (394)
T ss_pred HHHHHHHhcCCccccccCcccc---Cccccc----cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHH
Confidence 6654443322221111111010 000111 123444544444443233333445667777778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF- 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (408)
.....++..++.++.+++.||+++|+.+.....+..+...... ...+........+..++......|.
T Consensus 247 ~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~G~~~~~~~~~~ 315 (394)
T PRK03699 247 VSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV-----------NTDDPSHLLYAILGLGFFSSAIYTTI 315 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH-----------HcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9888899999999999999999999887765544443322211 0111112233344445544444455
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 015348 323 SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTG 368 (408)
Q Consensus 323 ~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~ 368 (408)
.+...+..|+ .+++..|......++|..++|.+.|.+.|..|...
T Consensus 316 ~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~ 360 (394)
T PRK03699 316 ITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQA 360 (394)
T ss_pred HHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchh
Confidence 5566676664 45777888899999999999999999999888643
No 42
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.97 E-value=4.3e-28 Score=228.48 Aligned_cols=348 Identities=13% Similarity=0.144 Sum_probs=242.3
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCc--chHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSS--ISIFT 79 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~ 79 (408)
+.+|+++.+|+|+.++|.+..+.. +..+.+|++|.++||+++|+.+|||+++.+.+..+++..++...+..+ ..++.
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~ 108 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVF 108 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHH
Confidence 567888999999999999999988 456669999999999998888889999999999888877765543111 12455
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------CChh
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-------FSPP 152 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-------~g~~ 152 (408)
+++..++.+++.++.+++..++..|++++++ +|.+..++.....++|..+.+.+...+.+. .+|+
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~--------eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~ 180 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKR--------EREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQ 180 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 6667778899999999999999999997765 599999988888888877766555443222 2466
Q ss_pred hHHHHHHHHHHHHHHHhhh-cccccccCC---CCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEE
Q 015348 153 SMFLFFGLLVVLQFFITIA-VRESALKLP---KSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFY 228 (408)
Q Consensus 153 ~~f~i~~~~~~~~~~~~~~-~~e~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (408)
....+.+++.++..+..++ .||++.++. +++++.+.++.++. .++||.++..+...++.+...........+|
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~---~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~ 257 (473)
T PRK10429 181 MFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVAL---IYKNDQLSCLLGMALAYNIASNIINGFAIYY 257 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHHHhhheeeE
Confidence 6666666666655544444 777643221 11122234444433 4789988887777666454444444455555
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
.++..+ +....+.+.....++.+++.++.+++.||+|+|+.+..+..+..+..+...... ...+...+.....
T Consensus 258 ~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~ 330 (473)
T PRK10429 258 FTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMG------LAAPHNALLIVIA 330 (473)
T ss_pred EEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHh------ccCchhHHHHHHH
Confidence 555554 566677777777788999999999999999999998777655444333221100 0011222233334
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcC-------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCP-------PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTG 368 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~ 368 (408)
.+..+++.+...+. .++++|.+| .+.+|..+|..+....++..+++.+.|.+.+..|++.
T Consensus 331 ~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy~~ 398 (473)
T PRK10429 331 GILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGYVP 398 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 44455555544454 778888866 4557789999999999999999999999999999854
No 43
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=5e-29 Score=229.76 Aligned_cols=349 Identities=15% Similarity=0.154 Sum_probs=226.4
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHH-HHHHHHHHHHHHHHHHhccCcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYI-AIGAFLQAVSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (408)
++.|+++++|.|++++|++.+... ..+.++++.|.++|| +||||.+ ..+.+...++..+..+++ +++.+
T Consensus 38 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~l 108 (393)
T PRK15011 38 LSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDK-----RGDRKSLIVFCCLLGVLACTLFAWNR----NYFVL 108 (393)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccchhHHHHHHHHHHHHHHHHHHHhh----HHHHH
Confidence 567889999999999999987665 566666666555999 8888764 555666666777777777 88887
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
++.+.+.+...+...+..+++..+..++++ + ..+..++..+.+.++|.++||.+++.+.+++|||..|++.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~ 181 (393)
T PRK15011 109 LFVGVFLSSFGSTANPQMFALAREHADKTG--R-----EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAV 181 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhhcc--c-----hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHH
Confidence 666555555555667777777777665443 1 235566788889999999999999999999999999999888
Q ss_pred HHHHHHHHhh-hcccccccCCCCCcchhHHHHHHHHHHhccc-chhHHHHHHHHhhhcccccccceeEEEEEeccCCChh
Q 015348 161 LVVLQFFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRK-PEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSS 238 (408)
Q Consensus 161 ~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (408)
..++..+... ++||+++++++.++ +. +.. .++ +..+.........+..........+.|.++++|.++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~ 252 (393)
T PRK15011 182 AFIVCGVMVWLFLPSMRKELPLATG--TL----EAP---RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEK 252 (393)
T ss_pred HHHHHHHHHHhhcCccCCCCccccc--cc----ccc---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 7776655544 47776543222111 10 111 112 2223222222222222222334455666677899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHh
Q 015348 239 VLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFK 318 (408)
Q Consensus 239 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
+.+.+.....+..+++.++.|++.||+++|+.+..+.......... .. . ....+.........++..+.
T Consensus 253 ~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~-~~--------~--~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 253 LAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAG-ML--------M--AHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HH--------H--HhhHHHHHHHHHHHHHHHHH
Confidence 9998887777888889999999999999998766554433322211 11 0 01111122222222222222
Q ss_pred hhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhhhhhhhhhccC
Q 015348 319 ILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCTILPLYWSYFMP 396 (408)
Q Consensus 319 ~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (408)
..+. ....+|..|+ ++|++.++++...++|..++|.++|.+.|+.|+. ..+.++.++.++.+...++.|
T Consensus 322 ~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYH--------AVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHHHHHHhhc
Confidence 2233 5567788875 5999999999999999999999999999987642 233344444445555555554
No 44
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=8.7e-29 Score=227.52 Aligned_cols=322 Identities=16% Similarity=0.180 Sum_probs=232.1
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+.+++|+|+++.+++.+...++..+ ++++|.++|| +|||+++..+.++..++...+.+.+ +++.+++.|+
T Consensus 17 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-----~g~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~ 87 (377)
T PRK11102 17 IAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS-----FGRKPVILGGTLVFALAAVACALAQ----TIDQLIYMRF 87 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh-----cCChHHHHHHHHHHHHHHHHHHHHc----cHHHHHHHHH
Confidence 4578999999999999999987777 9999999999 9999999999999999999998888 8999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
+.|++.+...+..++++.|+.|++ +|++.+++.+....+|..++|.+++.+.+..+||+.|++.+.+.++.
T Consensus 88 l~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 88 LHGLAAAAASVVINALMRDMFPKE---------EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 999999999999999999998865 39999999999999999999999999999999999999988877776
Q ss_pred HHHh-hhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHH
Q 015348 166 FFIT-IAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISK 244 (408)
Q Consensus 166 ~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 244 (408)
.+.. +++||+++++++ ++.+.++..++.++.+++|..+...+...+............++++.+..|+++.+.|...
T Consensus 159 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~ 236 (377)
T PRK11102 159 AALVFFFIPETLPKERR--QPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYF 236 (377)
T ss_pred HHHHHHhCCccCccccc--CCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHH
Confidence 5443 456775433222 1112333445555668888877666555443333333334445556667899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-H
Q 015348 245 VFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-S 323 (408)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 323 (408)
....++.+++.++.+++.||+++|+.+..+.....+..+....... .+...+...........+.....+. .
T Consensus 237 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (377)
T PRK11102 237 ALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSAL-------LDLGFWALVVGVAAFVGCVSMISSNAM 309 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH-------HhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9999999999999999999999999887776554433222111000 0011111111111122222222222 4
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHH-HHHHHHHHH
Q 015348 324 VYIAQVCPPGCEGSIMAFVMSAVA-LAFIVSGYL 356 (408)
Q Consensus 324 ~~~~~~~p~~~~g~~~g~~~~~~~-lg~~ig~~~ 356 (408)
....|..| +.+|++.++.+.... ++..+++.+
T Consensus 310 ~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 310 AVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 45556555 788999998776643 444455444
No 45
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=3.5e-29 Score=241.70 Aligned_cols=358 Identities=12% Similarity=0.034 Sum_probs=242.3
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+++++|+++.+.+++.++..++.++ ++++|+++|| +|||+.++++.++.+++.+++++++ +++.+++.|
T Consensus 192 ~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-----~GRR~~lii~lil~~i~~ll~afa~----s~~~llv~R 262 (742)
T TIGR01299 192 SAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-----LGRKQCLLICLSVNGFFAFFSSFVQ----GYGFFLFCR 262 (742)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHH
Confidence 45678999999999999999988877 8999999999 9999999999999999999999888 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------------CCh
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-------------FSP 151 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-------------~g~ 151 (408)
++.|++.+...+...+++.|+.|++ .|++..++...+..+|.++++.++..+... .+|
T Consensus 263 ~l~G~g~g~~~p~~~~~isE~~p~~---------~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gW 333 (742)
T TIGR01299 263 LLSGFGIGGAIPIVFSYFAEFLAQE---------KRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSW 333 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccH
Confidence 9999999999999999999999975 499999999999999999999888776543 368
Q ss_pred hhHHHHHHHHHHHHHHHhhhcccccccCCCCC-----------------c----chh------HHH--------------
Q 015348 152 PSMFLFFGLLVVLQFFITIAVRESALKLPKSQ-----------------S----NVG------IRA-------------- 190 (408)
Q Consensus 152 ~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~-----------------~----~~~------~~~-------------- 190 (408)
|+.+++.++..++.++..+++||+|+....+. + ..+ .+.
T Consensus 334 R~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (742)
T TIGR01299 334 RVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDT 413 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccc
Confidence 99999888877777766777999865311000 0 000 000
Q ss_pred -----------------HHHHHHHhcccchhHHHHHHH---HhhhcccccccceeEEEEE--------------------
Q 015348 191 -----------------QLSELSAALRKPEIMYSVAWF---AASYSIIPVLTGTMFFYQT-------------------- 230 (408)
Q Consensus 191 -----------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------------------- 230 (408)
.+.++++.++.+.....++.. +...+.......+.|....
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~ 493 (742)
T TIGR01299 414 GTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVA 493 (742)
T ss_pred cchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchh
Confidence 001122333333322222111 1111111112222111000
Q ss_pred ------------------------------------------------------------------e-------------
Q 015348 231 ------------------------------------------------------------------Q------------- 231 (408)
Q Consensus 231 ------------------------------------------------------------------~------------- 231 (408)
+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 573 (742)
T TIGR01299 494 HFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQN 573 (742)
T ss_pred ccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhh
Confidence 0
Q ss_pred ------ccCCC---------hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhccccccc
Q 015348 232 ------NLKIR---------SSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREM 296 (408)
Q Consensus 232 ------~~g~~---------~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (408)
..|.+ .........+..++.+++.++.+++.||+|+|+++..+.++.+++.+...+
T Consensus 574 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~--------- 644 (742)
T TIGR01299 574 CSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSF--------- 644 (742)
T ss_pred ccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH---------
Confidence 00000 011234466777899999999999999999999988877776666544221
Q ss_pred CcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchH
Q 015348 297 GVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLP 375 (408)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~ 375 (408)
.++.. .++...++.++......+. .++++|..|++.|++++|+.++..++|.+++|.++|.+.+... .
T Consensus 645 -~~s~~-~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~---------~ 713 (742)
T TIGR01299 645 -GNSES-AMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITK---------A 713 (742)
T ss_pred -HccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------H
Confidence 01111 1222222333333333344 8899999999999999999999999999999999998876421 2
Q ss_pred HHHHHHHhhhhhhhhhhhccCCCCCC
Q 015348 376 LALIIQAVCTILPLYWSYFMPDGVKS 401 (408)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (408)
..+.+++++.+++.+...++||++++
T Consensus 714 ~pf~i~a~~lll~~ll~~~LPET~~~ 739 (742)
T TIGR01299 714 APILFASAALACGGLLALKLPDTRGQ 739 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 33344444444555555567876653
No 46
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=2.2e-28 Score=226.43 Aligned_cols=330 Identities=14% Similarity=0.081 Sum_probs=237.4
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+.+++|.|..+.++..+++.+++.+ ++++|+++|| +|||+++..+..+..++.+++.+++ +++.+++.|+
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-----~Grr~~l~~~~~~~~~~~~~~~~a~----~~~~l~~~r~ 112 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-----IGRRPVLITGALIFTLACAATLFTT----SMTQFLIARF 112 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-----cCchHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHH
Confidence 5689999999999999999988777 9999999999 9999999999999999999999988 9999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
++|++.+...+...+.+.|..+++ ++++.++......++|..+||.+++.+.+..|||+.|++.++..++.
T Consensus 113 l~Gi~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~ 183 (413)
T PRK15403 113 IQGTSICFIATVGYVTVQEAFGQT---------KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 999999877777778888888765 38888999999999999999999999999899999999998887776
Q ss_pred HHH-hhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHH
Q 015348 166 FFI-TIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISK 244 (408)
Q Consensus 166 ~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 244 (408)
.+. .+.+||+++++++ +.+.++..++.++.+|||.++...+...+............|.+..+..|+++.+.++..
T Consensus 184 ~~~~~~~lp~~~~~~~~---~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~ 260 (413)
T PRK15403 184 FVGLLLAMPETVKRGAV---PFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQ 260 (413)
T ss_pred HHHHHHhCCCCccccCC---CCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHH
Confidence 654 3447876543221 112333455666779999998877665554444444444556677777899999999988
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhHHH
Q 015348 245 VFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPFSV 324 (408)
Q Consensus 245 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (408)
.....+.+++..+.+++.+|..+++.......+..+....... ... . .++.++.........+.+.....|...
T Consensus 261 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~-~~~----~-~~~~~~~~~~~~~l~~~G~~~~~p~~~ 334 (413)
T PRK15403 261 VPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIV-GNL----L-WPHVWLWSVLGTSLYAFGIGLIFPTLF 334 (413)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHH-HHH----H-ccccHHHHHHHHHHHHHHHHHHhHHHH
Confidence 8788888888888888775554444432222111111111110 000 0 112211123334444555554555522
Q ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 325 YIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 325 ~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
......++..+|++.|+.+.....+...++...|++.++
T Consensus 335 ~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 335 RFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 122222334579999999999999999999999988776
No 47
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=4.7e-29 Score=227.35 Aligned_cols=326 Identities=15% Similarity=0.110 Sum_probs=227.8
Q ss_pred hhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchhH-HHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVPY-IAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+.+|+|+|.+|+|+.... .+++.+++++|+++||++.++.||||. ++.+.+..+++...+++.+. ..+.+.+....+
T Consensus 14 ~~~~~g~s~~~~g~~~~~-~~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~-~~~l~~l~~~~~ 91 (356)
T TIGR00901 14 WLRSKNVSLKTIGFFSLV-GLPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP-STDLPLLAGLAF 91 (356)
T ss_pred HHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-chhHHHHHHHHH
Confidence 346889999999999755 556666999999999976665577775 67777777777777766642 236777778888
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC--------hhhHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS--------PPSMFLF 157 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g--------~~~~f~i 157 (408)
+.+++.+..+++.++++.|+.|++ +|+++.++...+.++|.++++.+++.+.+..+ ||..|++
T Consensus 92 ~~~~~~~~~~~~~~a~~~~~~~~~---------~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 92 LIAFFSATQDIALDAWRLEILSDE---------ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHh---------hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 889999999999999999999875 49999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHHHhhh-cccccccCCCCCcchhHHHHHHHHHHhcccch---hHHHHHHHHhhhcccccccceeEEEEEecc
Q 015348 158 FGLLVVLQFFITIA-VRESALKLPKSQSNVGIRAQLSELSAALRKPE---IMYSVAWFAASYSIIPVLTGTMFFYQTQNL 233 (408)
Q Consensus 158 ~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (408)
.++..++..+..++ .||++++++++ +++.++..+..++.+++|. ++...+..++............++|..+ .
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 239 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASVP--KPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-M 239 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcccccc--hhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c
Confidence 98877776655554 56653322111 1111222233444566665 5555544444333333444556666655 8
Q ss_pred CCChhhHHHHHHHHH-HHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccc-cccCcCceEeehhhhHHH
Q 015348 234 KIRSSVLGISKVFGQ-AAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVY-REMGVPDSLYVLIFSSLL 311 (408)
Q Consensus 234 g~~~~~~g~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 311 (408)
|+++++.+......+ ++.+++.++.+++.||+++|+.+..+.++.++......++....+ ...+.++ .+.+....+.
T Consensus 240 g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 318 (356)
T TIGR00901 240 GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH-LLMLFLTITL 318 (356)
T ss_pred CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch-HHHHHHHHHH
Confidence 999999998776655 678899999999999999988887777666554433222111100 0001111 1233334444
Q ss_pred HHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHH
Q 015348 312 EVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVA 347 (408)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~ 347 (408)
.+++.....+. .++.+|.+|+++||+++|+.++..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 319 EAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 45555545555 8999999999999999999988765
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=4.8e-29 Score=229.03 Aligned_cols=322 Identities=15% Similarity=0.094 Sum_probs=234.3
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHH----HHHHHHHHHHHHHHHHhccCcchHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYI----AIGAFLQAVSWLAIAILSQSSISIF 78 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l----~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (408)
+.|+ +|+|.|++|+|++.+...+...+ +|++|+++|| +||++.. ..+..+..+ .....++ +++
T Consensus 28 ~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-----~~~~~~~~~~~~~~~~l~~~--~~~~~~~----~~~ 95 (382)
T TIGR00902 28 PAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKD-----ANHIIIALRLLALASAIFAA--AFSAGAH----NAW 95 (382)
T ss_pred HHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCcHHHHHHHHHHHHHHHHH--HHHHhhh----hHH
Confidence 4566 67899999999999998866555 9999999999 8874432 222222221 2233455 899
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHH
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFF 158 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~ 158 (408)
.+++.|.+.+.+.+...+..+++..+. + + +|++..+......++|.+++|.+++.+.+++|||..|.+.
T Consensus 96 ~l~~~~~l~~~~~~~~~p~~~al~~~~-~--~--------~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 96 LLFIAIGLFALFFSAGMPIGDALANTW-Q--K--------QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHH-H--H--------HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 999999999988888888887876554 2 2 3777788888899999999999999999999999999887
Q ss_pred HHHHHHHHHHhhhcccc-cccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCCh
Q 015348 159 GLLVVLQFFITIAVRES-ALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRS 237 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (408)
+....+..+ .+.++|+ ++++++++++ ++..++.++.+|||+++...+..++............++|.+ +.|.++
T Consensus 165 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-~~g~s~ 239 (382)
T TIGR00902 165 TAGLAFMLI-GFLIKPTIPPKDAIPEDE---SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQ-AAGISA 239 (382)
T ss_pred HHHHHHHHH-HHHcCCCCCCCccccccc---cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCH
Confidence 655333332 3333433 2221111111 111233456689999988887776655555555555666664 489999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
.+.|.......++.+++..+.+++.||++.|+.+..+.+...+..... ...++.+.+.......++..+
T Consensus 240 ~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~-----------~~~~~~~~~~~~q~l~g~~~~ 308 (382)
T TIGR00902 240 SATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAII-----------GAIEAFPLIFLLQILHCGTFA 308 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH-----------HhHhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887777776654442 122333345555677777766
Q ss_pred hhhhH-HHHHHHhcCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Q 015348 318 KILPF-SVYIAQVCPPGCEGSIMAFVMS-AVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~~~~g~~~g~~~~-~~~lg~~ig~~~~g~l~~~~g 365 (408)
...+. ..++++. |++++++.++++++ ...+|..++|.++|.+.|+.|
T Consensus 309 ~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 309 VCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred HHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 66666 7788887 99999999999875 567999999999999999886
No 49
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=5.1e-29 Score=235.95 Aligned_cols=314 Identities=15% Similarity=0.116 Sum_probs=210.2
Q ss_pred Hhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHH--------HHHHHHHHHHHHHH
Q 015348 23 NSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFT--------MSLFLLLSNLGASI 93 (408)
Q Consensus 23 ~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~g~~~~~ 93 (408)
++..+++.+ ++++|+++|| +|||+.+..+.++.+++.+++++++ +++. +++.|+++|++.+.
T Consensus 64 ~~~~l~~~ig~~~~G~l~Dr-----~Grr~~l~~~~~l~~i~~~~~a~~~----~~~~~g~~a~~~l~~~R~l~G~g~g~ 134 (490)
T PRK10642 64 SVPFLIRPLGGLFFGMLGDK-----YGRQKILAITIVIMSISTFCIGLIP----SYATIGIWAPILLLLCKMAQGFSVGG 134 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHh-----cccHHHHHHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHHHHHhHhHh
Confidence 444466666 8999999999 9999999999999999999999998 7654 88999999999999
Q ss_pred HHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh--------hcCChhhHHHHHHHHHHHH
Q 015348 94 AEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAI--------DRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 94 ~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~g~~~~f~i~~~~~~~~ 165 (408)
..+...+++.|+.|+++ ||+..++...+..+|..+|+.+...+. ..+|||++|++.+++.++.
T Consensus 135 ~~~~~~~~~~e~~p~~~---------Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~ 205 (490)
T PRK10642 135 EYTGASIFVAEYSPDRK---------RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG 205 (490)
T ss_pred hHHHHHHHHHHhCCCCC---------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH
Confidence 99999999999999764 999999888888888888876655443 2579999999977665554
Q ss_pred HHHhhhcccccccCCCCC-----cch----hHHHHHHHHHHhccc-chhHHHH-HHHHhhhcccccccceeEEEEEeccC
Q 015348 166 FFITIAVRESALKLPKSQ-----SNV----GIRAQLSELSAALRK-PEIMYSV-AWFAASYSIIPVLTGTMFFYQTQNLK 234 (408)
Q Consensus 166 ~~~~~~~~e~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 234 (408)
.++...+||+++...+.+ +++ +.+..++ +.+++ +..+... ...++..........+.+.|..+.+|
T Consensus 206 ~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 282 (490)
T PRK10642 206 LYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFK---EIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLH 282 (490)
T ss_pred HHHHHcCCCChhHHHHHHhhhhhccccccccccCCHH---HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444455788654211100 000 0011122 22322 1111111 11122122333344456666666788
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHH
Q 015348 235 IRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVM 314 (408)
Q Consensus 235 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
++....+.......++.+++.++.+++.||+|+|+.+..+.+...+......... .......+....+..++
T Consensus 283 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~ 354 (490)
T PRK10642 283 YSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--------NSNVIGLIFAGLLMLAV 354 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH--------hCCCHHHHHHHHHHHHH
Confidence 8888777777778888999999999999999999887666543332222111100 00111122222232333
Q ss_pred HHHhhh-hHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 315 FFFKIL-PFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 315 ~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
...... ....+..+..|++.||+..|........++.++|.+.|++.+..+
T Consensus 355 ~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~ 406 (490)
T PRK10642 355 ILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ 406 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 222222 336677889999999999998766777778899999999987654
No 50
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=3.6e-29 Score=232.61 Aligned_cols=327 Identities=16% Similarity=0.207 Sum_probs=230.7
Q ss_pred hhhhhhccCCCHHH-----HHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchH
Q 015348 4 NFFLKDSLNVDPST-----LQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISI 77 (408)
Q Consensus 4 ~~~l~~~l~~s~~~-----~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~ 77 (408)
+.|. +++|.|+.+ .|++.+...+...+ +|++|+++|| +|||+.+..+.+...++.+++.+.+ ++
T Consensus 38 ~~~~-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~ 107 (408)
T PRK09874 38 PLYV-EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-----KGRKIMLLRSALGMGIVMVLMGLAQ----NI 107 (408)
T ss_pred HHHH-HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hCcHHHHHHHHHHHHHHHHHHHHHh----hH
Confidence 3444 578888654 47888888776666 9999999999 9999999999999888888888887 89
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHH
Q 015348 78 FTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLF 157 (408)
Q Consensus 78 ~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i 157 (408)
+.+++.|++.|++.+.. +...+.+.+..|++ +|++.++......++|..++|.+++.+.+..+||+.|++
T Consensus 108 ~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 177 (408)
T PRK09874 108 WQFLILRALLGLLGGFV-PNANALIATQVPRN---------KSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFI 177 (408)
T ss_pred HHHHHHHHHHHHhhhhH-HhHHHHHHHhcCHh---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999987654 55667888887765 489999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHH-HHhhhcccccccceeEEEEEeccCC
Q 015348 158 FGLLVVLQFFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAW-FAASYSIIPVLTGTMFFYQTQNLKI 235 (408)
Q Consensus 158 ~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~ 235 (408)
.++..++..+... ++||++++.+++ + +...++..+.+++|..+..... .+.............+.|..+..+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (408)
T PRK09874 178 TASVLFLCFLVTLFCIRENFQPVSKK-E----MLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGN 252 (408)
T ss_pred HHHHHHHHHHHHHHHhccCcccccch-h----hhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8887776655444 466654322211 1 1122344455777776543322 2221222112222233333332221
Q ss_pred Ch---hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHH
Q 015348 236 RS---SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLE 312 (408)
Q Consensus 236 ~~---~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
.. ...+......+++.+++.+..+++.||+++|+.+..+.....+..+.... ....+......+..
T Consensus 253 ~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 321 (408)
T PRK09874 253 VSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSF-----------VQTPLQLGILRFLL 321 (408)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH-----------hccHHHHHHHHHHH
Confidence 11 12455566667888888899999999999999887776655443332111 11122333444555
Q ss_pred HHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 313 VMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 313 ~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
+++.+...|. .+.+.+..|++++|+.+++.+...++|..+||.++|.+.+..|+
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~ 376 (408)
T PRK09874 322 GAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGF 376 (408)
T ss_pred HhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcch
Confidence 6666656666 77788889999999999999999999999999999999988764
No 51
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=8.2e-30 Score=242.28 Aligned_cols=333 Identities=13% Similarity=0.072 Sum_probs=252.4
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
.+.+++|.|+.+.+++.+...++..+ .|+.|+++|| +|||+.++.+.++..++.+++.+.+ +++.+++.|
T Consensus 27 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~ 97 (485)
T TIGR00711 27 TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR-----FGTRRLFLISTFAFTLGSLLCGVAP----NLELMIIFR 97 (485)
T ss_pred HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHhCcC----CHHHHHHHH
Confidence 45688999999999999999987777 8999999999 9999999999999999999999888 999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
+++|++.+...+...+++.|+.|++ +|++++++......+|..+||.+++++.++.+||+.|++.+.+.++
T Consensus 98 ~~~G~~~~~~~~~~~~~i~~~~~~~---------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~ 168 (485)
T TIGR00711 98 VIQGFGGGPLIPLSFSTLLNIYPPE---------KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGII 168 (485)
T ss_pred HHHHhhhhhHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHH
Confidence 9999999999999999999999875 3999999999999999999999999999999999999998877776
Q ss_pred HHHHhh-hcccccccCCCCCcc----------------------hh---HHHH---------------HHH--------H
Q 015348 165 QFFITI-AVRESALKLPKSQSN----------------------VG---IRAQ---------------LSE--------L 195 (408)
Q Consensus 165 ~~~~~~-~~~e~~~~~~~~~~~----------------------~~---~~~~---------------~~~--------~ 195 (408)
..+... ..||+++++.++.+. .+ .++. .++ .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (485)
T TIGR00711 169 VVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVD 248 (485)
T ss_pred HHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccC
Confidence 655443 366544322111000 00 0000 000 1
Q ss_pred HHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHH
Q 015348 196 SAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQ 275 (408)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 275 (408)
.+.+|+|.++...+..++............+.|.++..|+++.+.+.......++.+++.++.+++.||+++|+.+..+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~ 328 (485)
T TIGR00711 249 LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGL 328 (485)
T ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 23467777776665555534433334445566777778999999999999999999999999999999999998877776
Q ss_pred HHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhh-hHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHH
Q 015348 276 AMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKIL-PFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSG 354 (408)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~ 354 (408)
....+....... . .......+......+..+++.+... |......+..|++++|++.|+.+...++|+.+|+
T Consensus 329 ~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 401 (485)
T TIGR00711 329 ILYAVGFYWRAF---T----FTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGT 401 (485)
T ss_pred HHHHHHHHHHhc---c----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 655554433211 0 0011111123333455556554444 4466777889999999999999999999999999
Q ss_pred HHHHHHHHh
Q 015348 355 YLGVALASY 363 (408)
Q Consensus 355 ~~~g~l~~~ 363 (408)
.+.|.+.+.
T Consensus 402 ~i~g~~~~~ 410 (485)
T TIGR00711 402 ALITTILTN 410 (485)
T ss_pred HHHHHHHHH
Confidence 999988874
No 52
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=7.5e-29 Score=231.44 Aligned_cols=334 Identities=14% Similarity=0.127 Sum_probs=217.7
Q ss_pred hhhhcc--CCCHHHHHHHHHh-----hcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchH
Q 015348 6 FLKDSL--NVDPSTLQLLQNS-----ANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISI 77 (408)
Q Consensus 6 ~l~~~l--~~s~~~~g~~~~~-----~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~ 77 (408)
++.+++ +.++. .+++.+. ..+...+ +++.|+++|| +|||+.+..+.++.+++.+++++++ ++
T Consensus 48 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-----~Grr~~l~~~~~~~~~~~~~~~~~~----~~ 117 (438)
T PRK09952 48 VFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDR-----LGRKRMLMLTVWMMGIATALIGLLP----SF 117 (438)
T ss_pred HHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-----hccHHHHHHHHHHHHHHHHHHhcCC----cH
Confidence 344555 67776 4555332 2233334 6778999999 9999999999999999999999998 76
Q ss_pred H--------HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh--
Q 015348 78 F--------TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-- 147 (408)
Q Consensus 78 ~--------~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-- 147 (408)
+ .+++.|+++|++.+...+...+++.|+.|+++ |++..+....+..+|.+++..+...+..
T Consensus 118 ~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~---------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~ 188 (438)
T PRK09952 118 STIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK---------KAFYSSGVQVGYGVGLLLSTGLVSLISMMT 188 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC---------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5 58889999999999999888899999999764 8999998888888888888777666542
Q ss_pred ------cCChhhHHHHHHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHH-HHhhhccccc
Q 015348 148 ------RFSPPSMFLFFGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAW-FAASYSIIPV 220 (408)
Q Consensus 148 ------~~g~~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 220 (408)
.+|||.+|++.++..++........||+++..++++++++.++.........++|+.+..... .+........
T Consensus 189 ~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 268 (438)
T PRK09952 189 TDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYI 268 (438)
T ss_pred CHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHH
Confidence 579999999887765554333334666653211110100000011111123556665554432 2221222222
Q ss_pred ccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCc
Q 015348 221 LTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPD 300 (408)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (408)
...+.+.|..+.+|++...........++..+++.++.|++.||+++|+.+..+.++..+....... .. ...+
T Consensus 269 ~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~-~~------~~~~ 341 (438)
T PRK09952 269 VTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFM-AL------EAQS 341 (438)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HH------HcCC
Confidence 3344555666678888876655555667777888899999999999998877665544333222111 00 0011
Q ss_pred eEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcC
Q 015348 301 SLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVA-LAFIVSGYLGVALASYTG 365 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~-lg~~ig~~~~g~l~~~~g 365 (408)
.........+..+++.....+. +++..|..|++.|++..|+.+...+ +++.++|.+.|++.+..+
T Consensus 342 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~ 408 (438)
T PRK09952 342 IFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG 408 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1112222223333443333444 7889999999999999999766654 899999999999988653
No 53
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=1.3e-28 Score=229.77 Aligned_cols=333 Identities=14% Similarity=0.118 Sum_probs=218.1
Q ss_pred hhhhhcc---CCCHHHHHHHHHhhc---ccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC----
Q 015348 5 FFLKDSL---NVDPSTLQLLQNSAN---LPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS---- 73 (408)
Q Consensus 5 ~~l~~~l---~~s~~~~g~~~~~~~---~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~---- 73 (408)
.++.+++ +.++.+.+...+... +...+ ++++|+++|| +|||+.+..+..+.+++.+++++.+..
T Consensus 46 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr-----~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 120 (432)
T PRK10406 46 LYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADK-----HGRKKSMLISVCMMCFGSLVIACLPGYETIG 120 (432)
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCcHHHHHHHHHHHHHHHHHHhhcCCchhHH
Confidence 3566777 456665544444444 33335 7899999999 999999999999999999999888711
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh-------
Q 015348 74 SISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAI------- 146 (408)
Q Consensus 74 ~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~------- 146 (408)
..++..+++.|+++|++.+...+...+++.|+.|+++ |++..+..+.+...|.++++.+...+.
T Consensus 121 ~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~---------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 191 (432)
T PRK10406 121 TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR---------KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAE 191 (432)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc---------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 0123468899999999999999999999999999764 999999888888888888877665543
Q ss_pred -hcCChhhHHHHHHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhh-hcccccccce
Q 015348 147 -DRFSPPSMFLFFGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAAS-YSIIPVLTGT 224 (408)
Q Consensus 147 -~~~g~~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 224 (408)
+.+|||.+|++.+++.++.......+||+++.+.++. +.+ ++.++.+|+|..+...+...+. .........+
T Consensus 192 ~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~~---~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (432)
T PRK10406 192 LREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRAL---KEA---GSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTY 265 (432)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhhh---ccc---ccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2579999999988777665444444666543321110 011 1233446777766554433321 2223334456
Q ss_pred eEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEee
Q 015348 225 MFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYV 304 (408)
Q Consensus 225 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (408)
.|.|..+..|++..+.+.......+...++..+.|++.||+++|+.+.....+..+.......... ...+.. .
T Consensus 266 lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~ 338 (432)
T PRK10406 266 MQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQ------NVSSPY-A 338 (432)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH------cCCcHH-H
Confidence 666776778999888888888877788888889999999999998776554433322221111000 000111 1
Q ss_pred hhhhHHHHHHHHHhhhh-HHHHHHHhcCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC
Q 015348 305 LIFSSLLEVMFFFKILP-FSVYIAQVCPPGCEGSIMAFVMSAVAL-AFIVSGYLGVALASYTG 365 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~g~~~g~~~~~~~l-g~~ig~~~~g~l~~~~g 365 (408)
................+ ...+.+|..|++.|++..|+.+...+. .+...|.+.+.+ +..|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g 400 (432)
T PRK10406 339 AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIG 400 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhC
Confidence 11111111111112223 367889999999999999999888765 344577777755 4444
No 54
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=5e-29 Score=237.41 Aligned_cols=335 Identities=13% Similarity=0.105 Sum_probs=232.2
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
..+.+++|.|+.+.+++.+...++..+ .++.|+++|| +|||+.+..+.+..+++.+++.+.+ +++.+++.
T Consensus 44 ~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~ 114 (496)
T PRK03893 44 TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDR-----YGRRLAMVISIVLFSVGTLACGFAP----GYWTLFIA 114 (496)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHHHHh----HHHHHHHH
Confidence 346689999999999999999987777 8999999999 9999999999999999999999988 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
|++.|++.+...+...+++.|..|+++ |++.++......++|..+++.+++.+.+..+||+.|++..+..+
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 115 RLVIGMGMAGEYGSSATYVIESWPKHL---------RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 999999999999988899999998753 89999999999999999999999999999999999987554444
Q ss_pred HHHHHhhhcccccccCCCCCcchhHHHHHHHHH-------H-------------hcc-----------------------
Q 015348 164 LQFFITIAVRESALKLPKSQSNVGIRAQLSELS-------A-------------ALR----------------------- 200 (408)
Q Consensus 164 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-------~-------------~~~----------------------- 200 (408)
+..+....+||+++.+++++++.+.++..+... . .+.
T Consensus 186 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (496)
T PRK03893 186 FALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISF 265 (496)
T ss_pred HHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHH
Confidence 333333345665332111111100000000000 0 000
Q ss_pred -------c-chhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehH
Q 015348 201 -------K-PEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLIS 272 (408)
Q Consensus 201 -------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 272 (408)
+ +.........+.............+.|.++++|++..+.+.+.....++.+++.++.+++.||+++|+.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 345 (496)
T PRK03893 266 MVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYV 345 (496)
T ss_pred HHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 0 00000000000000011112234456666678999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 015348 273 AIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFI 351 (408)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ 351 (408)
.+..+..+..+.... . .....+.........+.......+. ..++++..|++++|+.+|+.++..++|..
T Consensus 346 ~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 416 (496)
T PRK03893 346 CSLLISQLLIIPVFA--------I-GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGA 416 (496)
T ss_pred HHHHHHHHHHHHHhh--------c-cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHH
Confidence 665544433322111 0 0011111111112111112122233 66788999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q 015348 352 VSGYLGVALASYTGV 366 (408)
Q Consensus 352 ig~~~~g~l~~~~g~ 366 (408)
+||.++|.+.|..|+
T Consensus 417 lgp~l~g~l~~~~g~ 431 (496)
T PRK03893 417 LAPILGALIAQRLDL 431 (496)
T ss_pred HHHHHHHHHhccCCh
Confidence 999999999998775
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=4.9e-28 Score=223.72 Aligned_cols=324 Identities=16% Similarity=0.118 Sum_probs=232.7
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
++.+++|.|+.+.+++.+...++..+ ++++|+++|| +|||+.+..+.....++.+.+.+.+ +++.+++.|
T Consensus 33 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-----~grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~ 103 (394)
T PRK11652 33 DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-----VGRRPVILVGMSIFILGTLVALFAH----SLTVLIAAS 103 (394)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-----cCChHHHHHHHHHHHHHHHHHHHHc----cHHHHHHHH
Confidence 45689999999999999999988887 9999999999 9999999999999999988888888 899999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+....+..|..+++ ++++.++..+.+..++..++|.+++.+.+..|||+.|++.++..++
T Consensus 104 ~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~ 174 (394)
T PRK11652 104 AIQGLGTGVGGVMARTLPRDLYEGT---------QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAG 174 (394)
T ss_pred HHHHhhhhHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 9999999988888878888877764 3888899999999999999999999999989999999998777665
Q ss_pred HHHH-hhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHH
Q 015348 165 QFFI-TIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGIS 243 (408)
Q Consensus 165 ~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 243 (408)
..+. .++.||+++++++ +++ ..+..++.+++|.++...+..+.............+.+..+.+|.++.+.++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 248 (394)
T PRK11652 175 VTFSMARWMPETRPADAR---RTR---VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSIL 248 (394)
T ss_pred HHHHHHHhCCccCccccc---hhH---HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHH
Confidence 5443 3457776443222 111 23344455788887765554433222222223333445556689999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF- 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (408)
.....++.+++..+.+++.||.+++... .............. ... .. ....+.........+.+.....|.
T Consensus 249 ~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~--~~~---~~-~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (394)
T PRK11652 249 FILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWI--PGW---FG-VMNVWTLLVPAALFFFGAGMLFPLA 320 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH--HHH---hc-cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999998732222 21111111111110 000 00 011122333344455555555566
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 323 SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 323 ~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
.+...+..| +++|+..++.+...++|..+++.+++.+.+
T Consensus 321 ~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 321 TSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 777778777 578999999999999999999988887654
No 56
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=2.9e-28 Score=223.94 Aligned_cols=317 Identities=11% Similarity=0.064 Sum_probs=224.0
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+.+++|.|+.++|++.+...+...+ +++.|+++|| +|||+.+..+..+..++...+.+.+ +++.+++.|+
T Consensus 32 ~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-----~g~k~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~ 102 (381)
T PRK03633 32 WLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-----IGFNRSYYLASLIFAAGCAGLGLMV----GFWSWLAWRF 102 (381)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHHH
Confidence 3468999999999999999988777 9999999999 9999999999999999999888888 9999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
+.|++.+...+...+.+.+..+++ +|++.++..+...++|..+||.+++.+.+...+... +..+......
T Consensus 103 l~G~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~~~~~~~~~ 172 (381)
T PRK03633 103 VAGIGCAMIWVVVESALMCSGTSR---------NRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLP-WVTGLVLAAI 172 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHH---------HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHH-HHHHHHHHHH
Confidence 999999998888777777777654 489999999999999999999999988765433333 2222222221
Q ss_pred HHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHH
Q 015348 166 FFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKV 245 (408)
Q Consensus 166 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 245 (408)
.. ..+.+.+++++++ +++ ++.++.+++|.++......+.............+.|.. +.|.++.+.+....
T Consensus 173 ~~-~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~g~s~~~~g~~~~ 242 (381)
T PRK03633 173 LP-LLFTRILNQQAEN-HDS-------TSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLN-HQGMSDASIGFWMA 242 (381)
T ss_pred HH-HHHhcccCCCCCC-CCC-------CCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHH
Confidence 11 1222222211111 111 11223366776665433222212112222233444443 46889989998888
Q ss_pred HHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HH
Q 015348 246 FGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SV 324 (408)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 324 (408)
...++.+++....+++.||+++|+.+..+.....+...... ... .........+.+.....|. .+
T Consensus 243 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~------------~~~--~~~~~~~l~g~~~~~~~p~~~~ 308 (381)
T PRK03633 243 LLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML------------SQA--AMAPALFILGAAGFTLYPVAMA 308 (381)
T ss_pred HHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh------------hhH--HHHHHHHHHHHHHHhHHHHHHH
Confidence 88899999999999999999999887766555554332211 000 1112223334444445566 77
Q ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 325 YIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 325 ~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
...|..|+++++...+..+...++|..+||.++|++.|+.|.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~ 350 (381)
T PRK03633 309 WACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD 350 (381)
T ss_pred HHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 788999988888888888888999999999999999998764
No 57
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=3.1e-29 Score=234.91 Aligned_cols=328 Identities=9% Similarity=0.012 Sum_probs=233.2
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH-HH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL-FL 84 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 84 (408)
+++++|.|+++.+++.+...+...+ .|++|+++|| +|||+.++.+.++..++.+.+++.+ +++.++. .|
T Consensus 45 i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-----~g~r~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~~~ 115 (455)
T TIGR00892 45 LQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-----FGCRPVVIAGGLLASLGMILASFSS----NVIELYLTAG 115 (455)
T ss_pred HHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-----cCchHHHHhhHHHHHHHHHHHHHhh----hHHHHHHHHH
Confidence 4589999999999999988855444 8999999999 9999999999999999998888888 8887765 56
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+...+++.++.+ + +|+++.++.+.+..+|..++|.+++.+.+.+|||+.|++.+++.++
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~-~---------~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~ 185 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY-R---------RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLH 185 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH-h---------hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 89999998765666678888875 2 4999999999999999999999999999999999999999888776
Q ss_pred HHHHhhhc-cccccc---CC---C--C-C-cch-----hHHHHHHHH--HHhcccchhHHHHHHHHhhhcccccccceeE
Q 015348 165 QFFITIAV-RESALK---LP---K--S-Q-SNV-----GIRAQLSEL--SAALRKPEIMYSVAWFAASYSIIPVLTGTMF 226 (408)
Q Consensus 165 ~~~~~~~~-~e~~~~---~~---~--~-~-~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (408)
..+..+++ ++++.+ +. + + + ..+ ...+..++. .+.+++|.++......++............+
T Consensus 186 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 265 (455)
T TIGR00892 186 CCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLV 265 (455)
T ss_pred HHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHH
Confidence 65444433 221110 00 0 0 0 000 001111111 2467888888776655553443333344445
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC--CCceehHHHH--HHHHHHHHHhHhhhcccccccCcCceE
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSV--SPRKLISAIQ--AMMAVFMISDVLFVKGVYREMGVPDSL 302 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (408)
.|.. +.|++..+.+...++.+++.+++.++.+++.||. ++++...... +..+...+... .....
T Consensus 266 ~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~-----------~~~~~ 333 (455)
T TIGR00892 266 PYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA-----------LAGDY 333 (455)
T ss_pred HHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH-----------HhchH
Confidence 5544 4799999999999999999999999999999974 2333222221 21111111110 11122
Q ss_pred eehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 303 YVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
+.+....+..+++.....+. .+++.+..|++++++.+|++++..++|+.+||.++|.+.|..|
T Consensus 334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 23344455556665555555 7888999999999999999999999999999999999998875
No 58
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=3.7e-28 Score=223.25 Aligned_cols=324 Identities=18% Similarity=0.070 Sum_probs=225.3
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcch----hHHHHHHHHHHHHHHHHHHhccCcchHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRV----PYIAIGAFLQAVSWLAIAILSQSSISIF 78 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk----~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (408)
+.|+ +|+|.|+.++|++.++..+...+ +|++|+++|| +||| +.+.+..... ........+ ++|
T Consensus 28 ~~~l-~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-----~g~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~ 95 (382)
T PRK11128 28 SVWL-KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKD-----PSQLIPALRLLALLTLLF--AVAFWFGAH----SFW 95 (382)
T ss_pred HHHH-HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhh-----hcchHHHHHHHHHHHHHH--HHHHHHhcc----cHH
Confidence 4566 67899999999999999987776 9999999999 8873 3333222221 222223334 899
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHH
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFF 158 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~ 158 (408)
.+++.|++.|++.+...+..+++..++.+ +|++.++......++|..+||.+++++.+++|||..|++.
T Consensus 96 ~l~i~~~l~g~~~~~~~~~~~a~~~~~~~-----------~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~ 164 (382)
T PRK11128 96 LLFVAIGLFNLFFSPLVPLTDALANTWQK-----------QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWIL 164 (382)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHh-----------hccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 99999999999988888888888777632 2556666677788999999999999999999999999988
Q ss_pred HHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChh
Q 015348 159 GLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSS 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (408)
+...++..+..++.||++++++++++ .++..++.++.+|+|.++...+..++............+.|. ++.|.++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~g~s~~ 240 (382)
T PRK11128 165 TAGVASMLLGQLLRPTIMPQGESRQQ---ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYW-QAAGYSAS 240 (382)
T ss_pred HHHHHHHHHHHHccCCCCCccccccc---cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHH-HHCCCCHh
Confidence 76555444444445554322211111 111123445668999988877655553333333333334444 45899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHh
Q 015348 239 VLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFK 318 (408)
Q Consensus 239 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
+.|.+.....++.++..++.+++.||+++|+.+..+.+..++..+... ..++.+......+..+++...
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 241 TIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMG-----------STTALPWLIVIQILHCGTFTV 309 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-----------hhhhHHHHHHHHHHHHHHHHH
Confidence 999998888899999999999999999999988777666555433311 112333444455656666554
Q ss_pred hhhH-HHHHHHhcCCchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCC
Q 015348 319 ILPF-SVYIAQVCPPGCEGSIMAFVMSA-VALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 319 ~~~~-~~~~~~~~p~~~~g~~~g~~~~~-~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..+. ..+..+. +++++++.++..+.. ..+|..+||.++|.+.|..|.
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 5555 6666675 566678999988744 567779999999999998863
No 59
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=4.3e-28 Score=230.07 Aligned_cols=331 Identities=17% Similarity=0.107 Sum_probs=221.9
Q ss_pred ccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhc--------cCcchHHHH
Q 015348 10 SLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILS--------QSSISIFTM 80 (408)
Q Consensus 10 ~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 80 (408)
+++.++.+.+++.+...++..+ ++++|+++|| +|||+.++.+.++..++.+.+++.. .....++.+
T Consensus 49 ~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-----~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 123 (479)
T PRK10077 49 SESAANSLLGFCVASALIGCIIGGALGGYCSNR-----FGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEF 123 (479)
T ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHH
Confidence 4489999999999999988877 9999999999 9999999999999888887776531 011246778
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh--------hcCChh
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAI--------DRFSPP 152 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~g~~ 152 (408)
++.|+++|++.+...+...+++.|+.|++ +|++..+..+.+..+|.++++.+++.+. +..|||
T Consensus 124 ~~~R~l~G~~~g~~~~~~~~~i~e~~~~~---------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr 194 (479)
T PRK10077 124 VIYRIIGGIGVGLASMLSPMYIAEIAPAH---------IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWR 194 (479)
T ss_pred HHHHHHHhhhHhHHhhHHHHHHHhhCChh---------hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChH
Confidence 89999999999999999999999999975 4999999999999999999988776553 357999
Q ss_pred hHHHHHHHHHHHHHHHhhhcccccccCCCCCcc-------------hhHHHHHHHHHHhccc-----chhHHH----HHH
Q 015348 153 SMFLFFGLLVVLQFFITIAVRESALKLPKSQSN-------------VGIRAQLSELSAALRK-----PEIMYS----VAW 210 (408)
Q Consensus 153 ~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~-----~~~~~~----~~~ 210 (408)
+.|++.++..++..+..+++||+++...+++++ ++.++..++.++..++ +..+.. ...
T Consensus 195 ~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (479)
T PRK10077 195 YMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVI 274 (479)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHH
Confidence 999998887777766666788876431110000 0011111222222211 111111 000
Q ss_pred HHhhhcccccc----cceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhH
Q 015348 211 FAASYSIIPVL----TGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDV 286 (408)
Q Consensus 211 ~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (408)
........... .....++..+..|.+....++.....++..+++.++.+++.||+++|+.+..+.++.++......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~ 354 (479)
T PRK10077 275 GVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLG 354 (479)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHH
Confidence 00000000000 00111122244677777677777778888899999999999999999988888777666544322
Q ss_pred hhhcccccccCcCceEeehhhhHHHHHHHH-HhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 287 LFVKGVYREMGVPDSLYVLIFSSLLEVMFF-FKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
.... . ..............+.+. ..+.|. ..+++|..|+++|+++.|+.+...+++..+++.+.+.+.
T Consensus 355 ~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 355 TAFY--T-----QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHh--c-----CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 1100 0 011111112222222222 223466 789999999999999999999999999999987776555
No 60
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=7e-28 Score=223.21 Aligned_cols=323 Identities=18% Similarity=0.152 Sum_probs=234.0
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+++++|.|+++.+++.++..++..+ ++++|+++|| +|||+.+..+..+..++.+.+.+.+ +++.+++.|+
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~ 102 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-----YGRKPVLLAGLSLFALGSLGMLWVE----SAAQLLVLRF 102 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-----cCCcHHHHHHHHHHHHHHHHHHHhc----CHHHHHHHHH
Confidence 5689999999999999999988777 9999999999 9999999999999999988888888 9999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
+.|++.+...+...+++.|..++++ +++..+.......+|..++|.+++.+.+..|||+.|++.++..++.
T Consensus 103 l~G~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~ 173 (401)
T PRK11043 103 VQAVGVCSAAVIWQALVIDRYPAQK---------ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLL 173 (401)
T ss_pred HHHhhhHHHHHHHHHHHHHhcCcHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 9999988888888888999888653 7777888888889999999999999999999999999988887777
Q ss_pred HHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHH
Q 015348 166 FFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKV 245 (408)
Q Consensus 166 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 245 (408)
.+..++++|+++++++ ++.+ ++.++.+|+|..+...+................+++. ++.|+++.+.|+...
T Consensus 174 ~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~ 245 (401)
T PRK11043 174 ILPTLRLKPSKKARKQ----SQDA---LTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFIL-EQMGYSPADIGLSYV 245 (401)
T ss_pred HHHHHHcCCCCCcccc----chHH---HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHH-HHcCCCHHHHHHHHH
Confidence 6665556654432211 1112 2344557788766544433322222222223344443 457999999998888
Q ss_pred HHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HH
Q 015348 246 FGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SV 324 (408)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 324 (408)
...++.+++....+++.||+++|+..........+.......... . .....+.........+.+.+...|. .+
T Consensus 246 ~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (401)
T PRK11043 246 PQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASL-----L-SHPSLVPLLIPFCVMAAANGAIYPIVVA 319 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH-----h-ccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999888665554444333222111100 0 0111112222233344444555565 55
Q ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 325 YIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 325 ~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
...+..| +++|++.|+.++....+...++.+.|.+.+
T Consensus 320 ~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 320 QALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 5556665 679999999999988888999988888876
No 61
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.96 E-value=4.2e-29 Score=232.59 Aligned_cols=338 Identities=14% Similarity=0.105 Sum_probs=214.5
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHH--H
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIF--T 79 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~ 79 (408)
++.|+++++|+|+.++|++.+...+...+ +|++|+++|| +|||+.++++.....+.......... .... .
T Consensus 33 ~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-----~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 105 (420)
T PRK09528 33 FPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-----LGLKKHLLWIISGLLVLFGPFFIYVF--APLLQYN 105 (420)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 45688889999999999999999988777 9999999999 99999988766555444332211100 0111 1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHH
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFG 159 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~ 159 (408)
......+.++..+.........+.++.++.+ + ++++.++......++|..++|.+++.+.+ .+|+..|++.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~ 177 (420)
T PRK09528 106 ILLGAIVGGIYLGFGFLAGAGAIEAYIERVS--R-----RSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGS 177 (420)
T ss_pred HHHHHHHHHHHhhhhhccchhhhhhHHHHHH--h-----hccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHH
Confidence 1122223333333332222233333333222 1 46767777777899999999999999876 48999999988
Q ss_pred HHHHHHHHHhhhcc-cccccCC--CCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEec---c
Q 015348 160 LLVVLQFFITIAVR-ESALKLP--KSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQN---L 233 (408)
Q Consensus 160 ~~~~~~~~~~~~~~-e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 233 (408)
+..++..+..++.+ |+++++. +++++++.+...++.++.+|||.++...+..+.............+.|..+. .
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (420)
T PRK09528 178 GSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATP 257 (420)
T ss_pred HHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88777666655543 3322211 1011111122345556678898876655443332222222222233333322 2
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHH
Q 015348 234 KIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEV 313 (408)
Q Consensus 234 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
+.+..+.|.......++..++.++.+++.||+++|+.+..+..+..+...+.. ..++.+.+.......+
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~-----------~~~~~~~~~~~~~l~g 326 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSG-----------FATGPLEVSILKLLHA 326 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH-----------hcccHHHHHHHHHHHH
Confidence 55667888988888899999999999999999999988777666555433321 1122223333344444
Q ss_pred HHHHhhhhH-HHHHHHhcCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 314 MFFFKILPF-SVYIAQVCPPGCEGSIMAF-VMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 314 ~~~~~~~~~-~~~~~~~~p~~~~g~~~g~-~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.......+. ..++.+..|++.+++.++. ++...++|..+++.+.|++.|..|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~ 381 (420)
T PRK09528 327 FEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF 381 (420)
T ss_pred HHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 444433333 6788899999999988766 6777889999999999999998874
No 62
>TIGR00898 2A0119 cation transport protein.
Probab=99.96 E-value=4.3e-28 Score=231.41 Aligned_cols=352 Identities=16% Similarity=0.120 Sum_probs=242.1
Q ss_pred hhhccCCC---HHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 7 LKDSLNVD---PSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 7 l~~~l~~s---~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
+++|+|++ +.+.++..++..++..+ ++++|+++|| +|||++++++.++..++.++.++++ +++.+++
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-----~Grr~~~~~~~~~~~i~~~~~~~~~----~~~~~~~ 185 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-----FGRKKVLLLSTLVTAVSGVLTAFSP----NYTVFLV 185 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-----ccchHHHHHHHHHHHHHHHHHHHcc----cHHHHHH
Confidence 56789998 99999999999988888 8999999999 9999999999999999999999988 9999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
.|++.|++.+...+...+++.|+.|+++ |++..+....+..+|.++++.++..+.+ ||+.+++.+++.
T Consensus 186 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~ 253 (505)
T TIGR00898 186 FRLLVGMGIGGIWVQAVVLNTEFLPKKQ---------RAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPT 253 (505)
T ss_pred HHHHHHhhccchHHHHHHHhheecChhh---------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHH
Confidence 9999999999999999999999998764 8999999999999999999988876643 999999999888
Q ss_pred HHHHHHhhhcccccccCCCCCcc-------------------hh------HHH---H--HHHHHHhcccchhHHHHHHHH
Q 015348 163 VLQFFITIAVRESALKLPKSQSN-------------------VG------IRA---Q--LSELSAALRKPEIMYSVAWFA 212 (408)
Q Consensus 163 ~~~~~~~~~~~e~~~~~~~~~~~-------------------~~------~~~---~--~~~~~~~~~~~~~~~~~~~~~ 212 (408)
++..+..+++||+++....+++. .+ .++ . ....++.+++|.++...+...
T Consensus 254 ~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 333 (505)
T TIGR00898 254 FLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLM 333 (505)
T ss_pred HHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHH
Confidence 87777677788875421100000 00 000 0 013345677777766655444
Q ss_pred hhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhccc
Q 015348 213 ASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGV 292 (408)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (408)
+.+............ ..+.++.+.. ......++..+++.++.+++.||+|+|+.+..+.++.++..+....
T Consensus 334 ~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~----- 404 (505)
T TIGR00898 334 MLWFTTAFSYYGLVL-DLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF----- 404 (505)
T ss_pred HHHHHHHHHHHHHhc-cccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-----
Confidence 323222111111111 2233444433 3334456777888889999999999999888877666665444222
Q ss_pred ccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 015348 293 YREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDF 371 (408)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~ 371 (408)
.. ....+......+..+++.....+. +.+..|..|++.|+++.|+.+....+|+.++|.+.+ +.+. +.
T Consensus 405 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-~~----- 473 (505)
T TIGR00898 405 ---VP-VDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-WL----- 473 (505)
T ss_pred ---cC-CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-HH-----
Confidence 00 011112222222233333333344 788899999999999999999999999999999988 4432 21
Q ss_pred CchHHHHHHHHhhhhhhhhhhhccCCCCCCc
Q 015348 372 SGLPLALIIQAVCTILPLYWSYFMPDGVKSK 402 (408)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (408)
...+.+.+.+.++.......+||+++++
T Consensus 474 ---~~~~~~~~~~~~~~~~~~~~lpet~~~~ 501 (505)
T TIGR00898 474 ---FLPLVLFGGLALLAGILTLFLPETKGVP 501 (505)
T ss_pred ---hhHHHHHHHHHHHHHHHHHcCcCCCCCC
Confidence 1122223333333334445678766543
No 63
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=2.8e-28 Score=231.37 Aligned_cols=339 Identities=14% Similarity=0.064 Sum_probs=228.3
Q ss_pred CCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 015348 13 VDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGA 91 (408)
Q Consensus 13 ~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 91 (408)
.++.+.+++.+...++..+ ++++|+++|| +|||++++.+.++..++.+++.+... ..+++.+++.|++.|++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-----~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~ 141 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDR-----FGRKKSLLIIALLFVIGAILMGLAAF-ALSVEMLIVGRVLLGIGV 141 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhh-----hhhHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHHhhh
Confidence 4489999999999988777 9999999999 99999999999999888888765441 125668999999999999
Q ss_pred HHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHH---HHHhhcCChhhHHHHHHHHHHHHHHH
Q 015348 92 SIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLV---GFAIDRFSPPSMFLFFGLLVVLQFFI 168 (408)
Q Consensus 92 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~---~~l~~~~g~~~~f~i~~~~~~~~~~~ 168 (408)
+...+...+++.|+.|+++ |++..++.+.+.++|..+++.++ +...+..+||+.|++.++..++..+.
T Consensus 142 ~~~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~ 212 (481)
T TIGR00879 142 GIASALVPMYLSEIAPKAL---------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLG 212 (481)
T ss_pred hHHHhHHHHHHHccCChhh---------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764 99999999999999999999998 66667789999999977666666555
Q ss_pred hhhcccccccC---CCCCc--------------chhHHH------------------HHHHHHHhccc---chhHHHHHH
Q 015348 169 TIAVRESALKL---PKSQS--------------NVGIRA------------------QLSELSAALRK---PEIMYSVAW 210 (408)
Q Consensus 169 ~~~~~e~~~~~---~~~~~--------------~~~~~~------------------~~~~~~~~~~~---~~~~~~~~~ 210 (408)
.+++||++... ++.++ +.+..+ ..++.++..++ +.++...+.
T Consensus 213 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (481)
T TIGR00879 213 LFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQ 292 (481)
T ss_pred HhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHH
Confidence 66677764310 00000 000000 00111111111 111111111
Q ss_pred HHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhc
Q 015348 211 FAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVK 290 (408)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (408)
.+. ............++..++.|++..+.+.......++.+++.++.+++.||+++|+.+..+..+..+..+.......
T Consensus 293 ~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (481)
T TIGR00879 293 WFQ-QFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGA 371 (481)
T ss_pred HHH-HHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 111 1111111122223344557888888888888889999999999999999999999887776655554333221000
Q ss_pred ccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 291 GVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
...................+..+.......+. ..+..|..|++.|++..|+.+...+++..++|.+.+.+.+..|..
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~ 449 (481)
T TIGR00879 372 SFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVG 449 (481)
T ss_pred cccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 00000000001111122222222223334455 677799999999999999999999999999999999999886643
No 64
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.96 E-value=1.1e-28 Score=229.95 Aligned_cols=347 Identities=18% Similarity=0.264 Sum_probs=265.8
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh-ccC---cchH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL-SQS---SISI 77 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~-~~~---~~~~ 77 (408)
+.+|+++.+|+++..+|.+..+.. +..+.+|+.|.++||++.|+.+|||+++.+.+..+++..++... +.. ....
T Consensus 24 ~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~ 103 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKL 103 (428)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHH
Confidence 467888999999999999999988 55666999999999999999899999999999999999888876 311 1234
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC-------C
Q 015348 78 FTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF-------S 150 (408)
Q Consensus 78 ~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------g 150 (408)
.++.+..++..++..+.+.+..++.+|..++++ +|.+..++......+|..+...+.+.+.+.. +
T Consensus 104 ~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~--------~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~ 175 (428)
T PF13347_consen 104 VWLFVFYILFDIAYTFVQIPYNALIPELTPDPD--------ERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNG 175 (428)
T ss_pred HHHHHHHHHHHHhhhhccCchhhcCccccccHh--------hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchH
Confidence 456777788899999999999999999999876 5999999998888888877776766665432 5
Q ss_pred hhhHHHHHHHHHHHHHHHhhh-cccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEE
Q 015348 151 PPSMFLFFGLLVVLQFFITIA-VRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQ 229 (408)
Q Consensus 151 ~~~~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (408)
|++...+.+++.++..+...+ .||++++.++++++.+.++.. ++.+|||+++......++.+..........++|.
T Consensus 176 ~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~---~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~ 252 (428)
T PF13347_consen 176 YRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSL---RSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYF 252 (428)
T ss_pred HHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccccch---hhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 888888888888877666554 788333333333333344444 4458999998888888776666555566666777
Q ss_pred EeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhH
Q 015348 230 TQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSS 309 (408)
Q Consensus 230 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
++.+|.+ ...+.......++.+++.++.+++.||+|+|+.+..+..+.++..+...+. +. .+.+......
T Consensus 253 ~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~i~~ 322 (428)
T PF13347_consen 253 TYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFL--------GP-GSPWLVLILF 322 (428)
T ss_pred HHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHH--------Hh-hhHHHHHHHH
Confidence 7767765 566777778889999999999999999999999998888877776654331 11 2233445555
Q ss_pred HHHHHHHHhhhhH-HHHHHHhcC-------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 015348 310 LLEVMFFFKILPF-SVYIAQVCP-------PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDD 370 (408)
Q Consensus 310 ~~~~~~~~~~~~~-~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~ 370 (408)
...+++.+...+. .++.+|..+ ++++|..+|+.+...+++..+++.+.|.+.+..|++.+.
T Consensus 323 ~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~~~ 391 (428)
T PF13347_consen 323 ILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYDANA 391 (428)
T ss_pred HHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcCCCc
Confidence 6666666555555 777777766 356799999999999999999999999999999987654
No 65
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=6.4e-28 Score=225.57 Aligned_cols=338 Identities=13% Similarity=0.084 Sum_probs=231.7
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
++++ +|+|+++.+++.+...++..+ +++.|+++|| +|||+.+..+.++.+++.+++...+....+++.+.+.|
T Consensus 52 ~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 125 (438)
T TIGR00712 52 YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-----SNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLL 125 (438)
T ss_pred HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-----cCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHH
Confidence 4544 599999999999999988777 9999999999 99999999998888888887766432123677788899
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh-cCChhhHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-RFSPPSMFLFFGLLVV 163 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-~~g~~~~f~i~~~~~~ 163 (408)
++.|++.+...+.....+.|+.|+++ |++++++.+...++|..+++.+.+...+ ..+||..|++.+++.+
T Consensus 126 ~l~g~~~g~~~~~~~~~i~~~~~~~~---------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~ 196 (438)
T TIGR00712 126 FLNGWFQGMGWPPCGRTMVHWWSQSE---------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAI 196 (438)
T ss_pred HHHHHHhhcchHHHHHHHHHhcCccc---------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999888888889999988754 9999999999999999999887765444 5789999999888877
Q ss_pred HHHHH-hhhcccccccCC----C--CC-------cchhHHHHHHHH--HHhcccchhHHHHHHHHhhhcccccccceeEE
Q 015348 164 LQFFI-TIAVRESALKLP----K--SQ-------SNVGIRAQLSEL--SAALRKPEIMYSVAWFAASYSIIPVLTGTMFF 227 (408)
Q Consensus 164 ~~~~~-~~~~~e~~~~~~----~--~~-------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (408)
+..+. .+++||+++++. + ++ ++++.+...++. ...+|++.++...+..++.+........+.|.
T Consensus 197 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 276 (438)
T TIGR00712 197 IVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPT 276 (438)
T ss_pred HHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 76544 444676543210 0 00 000000001111 23578888887766655544443444556677
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
|.++..|+++.+.++......+..+++.++.+++.||+++++....+.............+. .......+....
T Consensus 277 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 350 (438)
T TIGR00712 277 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYW------MNPAGNPLVDMI 350 (438)
T ss_pred HHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHH------hcCCCchHHHHH
Confidence 77777899999999988888899999999999999999654332223222211111111000 000011111111
Q ss_pred hHHHHHHHHHhhhhH---HHHHHHhcCCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCC
Q 015348 308 SSLLEVMFFFKILPF---SVYIAQVCPPGCEGSIMAFVMSAVALAF-IVSGYLGVALASYTGV 366 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~---~~~~~~~~p~~~~g~~~g~~~~~~~lg~-~ig~~~~g~l~~~~g~ 366 (408)
..+..+.. ...|. .....|..|++.+|++.|+.+...++++ .++|.+.|.+.|+.|+
T Consensus 351 ~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~ 411 (438)
T TIGR00712 351 CMIVIGFL--IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 411 (438)
T ss_pred HHHHHHHH--HccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccc
Confidence 11222222 12222 3456789999999999999999988875 6899999999998874
No 66
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=3.9e-28 Score=226.72 Aligned_cols=333 Identities=14% Similarity=0.077 Sum_probs=217.4
Q ss_pred hhhhhccCCCHHHHHHHH-Hhhc--ccc---cc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchH
Q 015348 5 FFLKDSLNVDPSTLQLLQ-NSAN--LPM---VG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISI 77 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~-~~~~--~~~---~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~ 77 (408)
..+++|++.++.+.+... +... ..+ .+ +++.|+++|| +|||+.++.+..+..++.+++++++ ++
T Consensus 39 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-----~Grr~~l~~~~~~~~~~~~l~~~~~----~~ 109 (434)
T PRK15075 39 TAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-----VGRRKGLIVTLSIMASGTLLIAFVP----GY 109 (434)
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-----hchHHHHHHHHHHHHHHHHHHHhCC----cH
Confidence 356788999887765443 2222 222 23 6788999999 9999999999999999999999988 66
Q ss_pred H--------HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh---
Q 015348 78 F--------TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAI--- 146 (408)
Q Consensus 78 ~--------~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~--- 146 (408)
+ .+++.|+++|++.+...+...+++.|+.|+++ |++.+++.....++|..+++.+++.+.
T Consensus 110 ~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~---------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~ 180 (434)
T PRK15075 110 ATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR---------KGFYTSWQSASQQVAVVFAALLGYLLNQWL 180 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc---------chHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5 46889999999999988888899999999764 999999999888888888888877763
Q ss_pred -----hcCChhhHHHHHHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHH-HHhhhccccc
Q 015348 147 -----DRFSPPSMFLFFGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAW-FAASYSIIPV 220 (408)
Q Consensus 147 -----~~~g~~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 220 (408)
+.+|||++|++......+........||+++..+++ ++.+.++..++ ..+++..+..... .+........
T Consensus 181 ~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
T PRK15075 181 SPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK-HRPSMREIFRS---LAANWRIVLAGMLMVAMTTVSFYL 256 (434)
T ss_pred CHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh-hccccccHHHH---HHHhHHHHHHHHHHHHHHHHHHHH
Confidence 468999999875443222211111233432110110 01111111222 2344443332222 2222222333
Q ss_pred ccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCc
Q 015348 221 LTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPD 300 (408)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (408)
...+.|.|.++..|++..+.++......++.+++.++.|++.||+++|+.+..+................ . ..
T Consensus 257 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~------~-~~ 329 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLV------A-AP 329 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH------c-CC
Confidence 4455666677778999988888888888999999999999999999998876654433222111110000 0 01
Q ss_pred eEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCC
Q 015348 301 SLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVAL-AFIVSGYLGVALASYTGV 366 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~l-g~~ig~~~~g~l~~~~g~ 366 (408)
............+++.+...+. ..+..|..|++.|++..|+.+.+.+. ++.++|.+.|++.|+.|.
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 1111111122223333333343 67789999999999999997666654 578899999999999874
No 67
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=2.9e-28 Score=221.74 Aligned_cols=303 Identities=19% Similarity=0.175 Sum_probs=246.4
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+.+++|.++.+.+++.+...+...+ +|++|+++|| +|||+.+..+.+...++.+.+...+ +++.+++.|+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-----~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 95 (352)
T cd06174 25 LAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-----FGRRRVLLLGLLLFALGSLLLAFAS----SLWLLLVGRF 95 (352)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCchhhHHHHHHHHHHHHHHHHhc----cHHHHHHHHH
Confidence 3467899999999999999977666 9999999999 9999999999999999999998888 9999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
+.|++.+...+..++++.|+.|+++ |++.++..+...++|..++|.+++.+.+..+||+.+++.++..++.
T Consensus 96 l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (352)
T cd06174 96 LLGLGGGALYPAAAALIAEWFPPKE---------RGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLL 166 (352)
T ss_pred HHHcccccccHhHHHHHHHhCCccc---------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999854 9999999999999999999999999999999999999998888777
Q ss_pred HHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHH
Q 015348 166 FFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKV 245 (408)
Q Consensus 166 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 245 (408)
.+...+.+ |.++...+..+.............+.+..+..|.+..+.+....
T Consensus 167 ~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T cd06174 167 ALLLLFLL----------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLS 218 (352)
T ss_pred HHHHHHHH----------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 66655554 23333444444433333344444555555556889999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCce-ehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-H
Q 015348 246 FGQAAMLLWGVIYNSGLKSVSPRK-LISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-S 323 (408)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 323 (408)
...++..++.++.+++.||+++|+ .+..+.....+....... ....+.........+++.....+. .
T Consensus 219 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352)
T cd06174 219 LFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL-----------APSLALLLVALLLLGFGLGFAFPALL 287 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-----------hccHHHHHHHHHHHHHHHhccchhHH
Confidence 999999999999999999999998 777776666655444221 111223444455566666656666 8
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 324 VYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 324 ~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
++..|..|+++|++.+|+.+...+++..+++.+.|.+.|..+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~ 330 (352)
T cd06174 288 TLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGY 330 (352)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc
Confidence 8999999999999999999999999999999999999986554
No 68
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=1.7e-28 Score=231.47 Aligned_cols=332 Identities=12% Similarity=0.056 Sum_probs=234.0
Q ss_pred ccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 015348 10 SLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSN 88 (408)
Q Consensus 10 ~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 88 (408)
|++.|+.+.|++.+.+.+++.+ +++.|+++|| +|||+.+..+.++..++.+++.+.. ..+++.+++.|+++|
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-----~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK-----YVFKWSIGIGMFLSSVISIVIPWAA--GGGIALVVFCRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-----hCcchhhHHHHHHHHHHHHHHHHHH--HcCchHHHHHHHHHH
Confidence 7899999999999999988888 9999999999 9999999999988888887765442 115788999999999
Q ss_pred HHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-CChhhHHHHHHHHHHHHHH
Q 015348 89 LGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-FSPPSMFLFFGLLVVLQFF 167 (408)
Q Consensus 89 ~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-~g~~~~f~i~~~~~~~~~~ 167 (408)
++.+...+....++.|+.|+++ |++++++...+.++|.++++.+++.+.+. .|||..|.+.++..++..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~ 213 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKE---------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSL 213 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHH
Confidence 9999999999999999998764 99999999999999999999999999988 4999999999988877766
Q ss_pred Hhhh-cccccccCCCCCcch--hHHH----------HHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccC
Q 015348 168 ITIA-VRESALKLPKSQSNV--GIRA----------QLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLK 234 (408)
Q Consensus 168 ~~~~-~~e~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 234 (408)
.++. .+|+|+++++.++++ ..++ .....++.+++|.+|...+..+...........+.|.|+.+.+|
T Consensus 214 ~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g 293 (465)
T TIGR00894 214 LWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLR 293 (465)
T ss_pred HHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6555 455443222111100 0000 00124556888888888777666555555566677788888899
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHH---HHHHHHHHHH--HhHhhhcccccccCcCceEeehhhhH
Q 015348 235 IRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISA---IQAMMAVFMI--SDVLFVKGVYREMGVPDSLYVLIFSS 309 (408)
Q Consensus 235 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
++..+.|+......++.+++..+.|++.||.++|+.... .......... ....+... . ............
T Consensus 294 ~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~ 368 (465)
T TIGR00894 294 VSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALP----Y-LSAAFYLTIIIL 368 (465)
T ss_pred cChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH----H-cCCchHHHHHHH
Confidence 999999999999999999999999999998764432210 0011111100 00000000 0 011111112222
Q ss_pred HHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 310 LLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 310 ~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
...+.......+. .....+..| +..|.+.|+.+...+++..++|.+.|.+.+.
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 369 TLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred HHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 2222222222233 445556666 4899999999999999999999988887764
No 69
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=2.1e-28 Score=226.60 Aligned_cols=325 Identities=16% Similarity=0.150 Sum_probs=230.5
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
++.+++|.|+.+.+++.+...++..+ +++.|+++|| +|||+.+..+.++..++.+++.+.+ +++.+++.|
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-----~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 112 (398)
T TIGR00895 42 AISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR-----IGRKRVLLWSILLFSVFTLLCALAT----NVTQLLILR 112 (398)
T ss_pred HHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHHcc----chHHHHHHH
Confidence 45688999999999999998877776 8999999999 9999999999999999988888888 899999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVL 164 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~ 164 (408)
++.|++.+...+...+++.|+.|++ +|++.+++......+|..+++.+++.+.+..||+..|++.++...+
T Consensus 113 ~~~g~~~~~~~~~~~~~~~~~~~~~---------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 183 (398)
T TIGR00895 113 FLAGLGLGGLMPNLNALVSEYAPKR---------FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLL 183 (398)
T ss_pred HHHhcccccchhhHHHHHHHHcCHH---------hhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHH
Confidence 9999999999999999999999875 4999999999999999999999999999999999999998766555
Q ss_pred HHH-HhhhcccccccCCCC------------------------CcchhHHHHHHHHHH-hccc---chhHHHHHHHHhhh
Q 015348 165 QFF-ITIAVRESALKLPKS------------------------QSNVGIRAQLSELSA-ALRK---PEIMYSVAWFAASY 215 (408)
Q Consensus 165 ~~~-~~~~~~e~~~~~~~~------------------------~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~ 215 (408)
..+ ...++||+++...++ +++++.++..++..+ .+++ +..+......++..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (398)
T TIGR00895 184 LLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLL 263 (398)
T ss_pred HHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 543 344566653211000 000000011112122 1222 22222222222212
Q ss_pred cccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccc
Q 015348 216 SIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYRE 295 (408)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (408)
........+.+ ++.++.|.++.+.+.......++.+++.++.+++.||+++|+.. .......+....... .
T Consensus 264 ~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~---~---- 334 (398)
T TIGR00895 264 VGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLVGS---T---- 334 (398)
T ss_pred HHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHH---H----
Confidence 22222223333 44556789999999999999999999999999999999988333 332222222222111 0
Q ss_pred cCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 296 MGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
. ..........+..+++.....+. .+++.|..|+++||+++|+.++..++|..+||.++|.+
T Consensus 335 --~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 335 --L-FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred --h-hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 0 11112233344455555545555 88999999999999999999999999999999999875
No 70
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=1.8e-27 Score=220.42 Aligned_cols=337 Identities=10% Similarity=0.008 Sum_probs=224.6
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCC-cchhHHHHHHHHHHHHHHHHHHhccCcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQ-HRVPYIAIGAFLQAVSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~-grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (408)
++.|+++++|+|++|+|++.+...+..++ ++++|.++|| + |||+++.++.+...++..+..+.+ +++.+
T Consensus 25 l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-----~g~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~ 95 (418)
T TIGR00889 25 LGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADK-----WLSAQKVYAVCHFAGALLLFFAAQVT----TPAGM 95 (418)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcccHHHHHHHHHHHHHHHHHHHHhc----CHHHH
Confidence 45678899999999999999999987777 9999999999 7 457788888888878877777777 89998
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
...|.+.+++.+...+..+++..+...+..++ ...+..|.|..+ ++|.++||.+++.+.....|+ +|++.++
T Consensus 96 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~-~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~ 167 (418)
T TIGR00889 96 FPVLLANSLAYMPTIALTNSISYANLPQAGLD-VVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAG 167 (418)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhhcCCC-chhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHH
Confidence 99999999987777776666654443211000 000002444444 578999999998873322343 4666666
Q ss_pred HHHHHHHHhhhcccccccCCCCCcchhHHHHH-HHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCC----
Q 015348 161 LVVLQFFITIAVRESALKLPKSQSNVGIRAQL-SELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKI---- 235 (408)
Q Consensus 161 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---- 235 (408)
..++..+..+++||+++.+++++ .+.++.. .+..+.+|+|.++...+..++............+.+. ++.|.
T Consensus 168 ~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 244 (418)
T TIGR00889 168 SSALLGVFALTLPDIPVAKSTAK--MSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFL-HEFGRNPEF 244 (418)
T ss_pred HHHHHHHHHhcCCCCCCCccccc--cCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHH-HHhcccccc
Confidence 66666555556787653322211 1122211 1233568888877766665553332222222222222 22333
Q ss_pred ----ChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHH
Q 015348 236 ----RSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLL 311 (408)
Q Consensus 236 ----~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
+.+..+.......+..+++.+..+++.||+++|+.+..+.+...+....... . . ......+.+....+.
T Consensus 245 ~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~--~--~---~~~~~~~~l~l~~~l 317 (418)
T TIGR00889 245 ADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY--G--D---PEYFGYALLFLSMIV 317 (418)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--c--C---cchhhHHHHHHHHHH
Confidence 3466788889999999999999999999999999988887766655433211 0 0 000011123334455
Q ss_pred HHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCC
Q 015348 312 EVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVM-SAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~-~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+++.....+. ..++.|..|++.|++++|+.+ ...++|..+||.++|.+.|+.|.
T Consensus 318 ~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~ 374 (418)
T TIGR00889 318 YGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFA 374 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc
Confidence 55555555555 778899999999999999997 56789999999999999998764
No 71
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=1.4e-26 Score=213.62 Aligned_cols=342 Identities=13% Similarity=0.045 Sum_probs=217.0
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchhHHHHHH-HHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVPYIAIGA-FLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.|+ +|.|.|++++|++. ...+++..+++++++.||+..+++||||..++.. .+...+...............+..
T Consensus 24 lp~~l-~~~g~~~~~iGl~~-~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (390)
T TIGR02718 24 LPTLL-REDGAPLTALAFLP-LVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV 101 (390)
T ss_pred HHHHH-HHcCCCHHHHHHHH-HHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 46677 56799999999983 3333444444444444443222277777654443 323322333332211111233445
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
....+.++..+..++..|++..|..+++ +++...+....+..+|.++|+...+++.+..|||..|++.+..
T Consensus 102 ~~~~~~~~~~a~~d~~~d~~~~~~~~~~---------~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l 172 (390)
T TIGR02718 102 GLLACASLASATQDIATDGMAAEHFNGR---------TLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACV 172 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHh---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 5566677888889999988888876654 3777788777788899999998888999999999999999988
Q ss_pred HHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHH
Q 015348 162 VVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLG 241 (408)
Q Consensus 162 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 241 (408)
.++..+..++++|++++++++ + ++..++.++.+|+|.++......++............++|..| .|+++++.|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig 246 (390)
T TIGR02718 173 PLASLVCVLWLKDRAVASPEA-P----LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIG 246 (390)
T ss_pred HHHHHHHHHHcCCCCcCcccc-c----hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHH
Confidence 877666655555443222111 1 1122345566899988777766655444333444445556654 799999999
Q ss_pred HHHHHHH-HHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhh
Q 015348 242 ISKVFGQ-AAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKIL 320 (408)
Q Consensus 242 ~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (408)
....... ...+++..+.|++.||+++|+.+..+....+...+........ +..+.. ..........++..+...
T Consensus 247 ~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~g~~~ 321 (390)
T TIGR02718 247 RLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAF----WLAPGI-AVAWSCSAFGSLITGITS 321 (390)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHc----ccCCcH-HHHHHHHHHHHHHHHHHH
Confidence 9877765 4667788999999999999988877665543322221110000 001111 111122222222233333
Q ss_pred hH-HHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 321 PF-SVYIAQVCPP-GCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 321 ~~-~~~~~~~~p~-~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
+. .+...+.+++ +.+|+.+++.++..++|..++|.++|.+.|+.|+
T Consensus 322 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~ 369 (390)
T TIGR02718 322 VAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGY 369 (390)
T ss_pred HHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33 5666677766 8899999999999999999999999999998874
No 72
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=4.7e-27 Score=218.59 Aligned_cols=325 Identities=11% Similarity=0.030 Sum_probs=229.4
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHH---HHhccCcchHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAI---AILSQSSISIFTMS 81 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 81 (408)
.+++++|+|+.+.|+..+...+++.+ +++.|+++|| +|||+.+..+..+.+++.+++ ..++ +++.++
T Consensus 51 ~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr-----~G~r~~l~~g~~~~~~~~~l~~~~~~a~----~~~~ll 121 (438)
T PRK10133 51 QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-----LSYKAGIITGLFLYALGAALFWPAAEIM----NYTLFL 121 (438)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHHHHHhcC----CHHHHH
Confidence 46899999999999999999988887 9999999999 999999999999999998775 3456 899999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh-c------------
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-R------------ 148 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-~------------ 148 (408)
+.|+++|++.+..++..++++.|..+++ +|.+.++..+...++|..+|+.+++.+.. .
T Consensus 122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~---------~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l 192 (438)
T PRK10133 122 VGLFIIAAGLGCLETAANPFVTVLGPES---------SGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKM 192 (438)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChh---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhcc
Confidence 9999999999999999999999875443 35556888888999999999998876541 0
Q ss_pred -------------CChhhHHHHHHHHHHHHHHHhh--hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHh
Q 015348 149 -------------FSPPSMFLFFGLLVVLQFFITI--AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAA 213 (408)
Q Consensus 149 -------------~g~~~~f~i~~~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (408)
.+||.+|+....+..+..+... ..||.++++++ + ++.++..++.++.+++|.++...+..++
T Consensus 193 ~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~--~-~~~~~~~~~~~~ll~~~~~~~~~l~~~~ 269 (438)
T PRK10133 193 TPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS--D-AKQGSFSASLSRLARIRHWRWAVLAQFC 269 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--c-ccccchhhhHHHHHhCchHHHHHHHHHH
Confidence 2466666543333332222222 24443221111 1 0111122334456888887766554444
Q ss_pred hhcccccccceeEEE-EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhccc
Q 015348 214 SYSIIPVLTGTMFFY-QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGV 292 (408)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (408)
..........+.+.| .++..|.++.+.+.......++.+++.++.+++.||+++|+.+..+..+.....+....
T Consensus 270 ~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~----- 344 (438)
T PRK10133 270 YVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF----- 344 (438)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-----
Confidence 333323233344444 34568999999999999999999999999999999999999887776555444333221
Q ss_pred ccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 293 YREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.+.. .........+++.+...|. ++...+..|+ +.+++.++.. ...+++.++|.+.|.+.|..|
T Consensus 345 -----~~~~--~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 345 -----AGGH--VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred -----cCCh--HHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHhcc
Confidence 0111 1123345567777777787 7777787765 4677777775 455788899999999999876
No 73
>PRK11462 putative transporter; Provisional
Probab=99.96 E-value=1.9e-26 Score=215.67 Aligned_cols=342 Identities=14% Similarity=0.154 Sum_probs=236.7
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCc--chHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSS--ISIFT 79 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~ 79 (408)
+.+|+++.+|+++..+|.+..+.. +..+..|+.|.++||+++|+.+|||+++++.+..+++..++...++.+ .....
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 567888999999999999999988 566669999999999999998999999999999988888777665311 12456
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC-------Chh
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF-------SPP 152 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------g~~ 152 (408)
+.+...+..++..+.+.+..++.+|++++.+ +|++..++...+.++|..+++.+...+.+.. +|+
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~--------eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~ 183 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPT--------QRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQ 183 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 6777788899999999999999999999876 6999999999999999888877765554433 577
Q ss_pred hHHHHHHHHHHHHHHHhhh-cccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEe
Q 015348 153 SMFLFFGLLVVLQFFITIA-VRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQ 231 (408)
Q Consensus 153 ~~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (408)
....+.+++.++.....+. .||++++++ ++.+.++. ++..++||.++..+...++.............+|.+.
T Consensus 184 ~~~~i~~ii~~i~~~i~~~~~kE~~~~~~---~~~~~~~~---l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y 257 (460)
T PRK11462 184 GGIAVLSVVAFMMLAFCFFTTKERVEAPP---TTTSMRED---LRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTW 257 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhcceeccCCCc---cCCCHHHH---HHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhh
Confidence 7777777666665544444 566543221 11234443 3445889988776655444333333333334444444
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHH
Q 015348 232 NLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLL 311 (408)
Q Consensus 232 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
..|. +...+.+.....++.+++..+++++.||+++|+....+.....+..+...+ .+..... ......+.
T Consensus 258 ~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~l 327 (460)
T PRK11462 258 ILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFF--------VPMQASI-TMFVFIFV 327 (460)
T ss_pred hcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH--------hchhHHH-HHHHHHHH
Confidence 4553 344556667778888999999999999999887765444433332222111 0111111 11222223
Q ss_pred HHHHHHhhhhH-HHHHHHhcC-------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 015348 312 EVMFFFKILPF-SVYIAQVCP-------PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTG 368 (408)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~ 368 (408)
.+++.....+. +++..|..+ ++.+|..++..+...++|..+++.++|.+.+..|+..
T Consensus 328 ~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy~~ 392 (460)
T PRK11462 328 IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA 392 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34444444444 666666665 4567888899889999999999999999999888864
No 74
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=6.9e-28 Score=222.82 Aligned_cols=333 Identities=15% Similarity=0.148 Sum_probs=227.4
Q ss_pred hhhhhcc--CCCHHHHHHHHHhhc-----ccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcch
Q 015348 5 FFLKDSL--NVDPSTLQLLQNSAN-----LPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSIS 76 (408)
Q Consensus 5 ~~l~~~l--~~s~~~~g~~~~~~~-----~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~ 76 (408)
.++.++. +.++.+.+...+... +...+ +++.|+++|| +|||+.+..+.++..++.+++.+.+ +
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-----~g~r~~l~~~~~~~~~~~~~~~~~~----~ 87 (394)
T TIGR00883 17 VLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-----IGRKKTLVITLLMMGIGTLLIGLLP----S 87 (394)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-----hhhHHHHHHHHHHHHHHHHHHhhCC----C
Confidence 3444443 355666666665433 22233 7899999999 9999999999999999999988887 5
Q ss_pred HH--------HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh--
Q 015348 77 IF--------TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAI-- 146 (408)
Q Consensus 77 ~~--------~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~-- 146 (408)
++ .+++.|+++|++.+...+...+++.|+.++++ |++..+..+.+..+|.++++.++..+.
T Consensus 88 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~G~~i~~~~~~~~~~~ 158 (394)
T TIGR00883 88 YATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK---------RGFYGSFQQVGAPVGLLLAALTVLLLSYL 158 (394)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc---------chHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 57888999999999999988899999988754 999999999999999999998877654
Q ss_pred ------hcCChhhHHHHHHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccch--hHHHHHHHHhhhccc
Q 015348 147 ------DRFSPPSMFLFFGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPE--IMYSVAWFAASYSII 218 (408)
Q Consensus 147 ------~~~g~~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 218 (408)
+..+||+.|.+.++..++........||+++.+++++++++.+ ++.++.++++. ++......++.....
T Consensus 159 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T TIGR00883 159 LGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHKKKR---GPIRETLTKHRKPFLLGLGLVIATTTTF 235 (394)
T ss_pred cCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcccccc---CCHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 3578999999887776665555445666543322111111111 12223344443 444444444433333
Q ss_pred ccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCc
Q 015348 219 PVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGV 298 (408)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (408)
.......+.|..++.|.++.+.+.......++.+++.++.+++.||+++|+.+.....+........... ...
T Consensus 236 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~ 308 (394)
T TIGR00883 236 YLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA-------LLD 308 (394)
T ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH-------Hhc
Confidence 3344555666667788999999998888999999999999999999999987665444333322111110 000
Q ss_pred CceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Q 015348 299 PDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVM-SAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~-~~~~lg~~ig~~~~g~l~~~~g 365 (408)
....+.........+++.....+. .+.+.|..|+++|+++.|+.. ....+|..++|.++|.+.|+.|
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 309 SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 112222233334444444334444 889999999999999999854 4456788899999999999877
No 75
>PRK09848 glucuronide transporter; Provisional
Probab=99.96 E-value=3.9e-26 Score=214.30 Aligned_cols=343 Identities=11% Similarity=0.067 Sum_probs=225.3
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC---cchHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS---SISIF 78 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~---~~~~~ 78 (408)
+.+|+++++|+|+.++|.+.+...+...+ +|++|.++||++.|+.+||+++..+.+...+...++...+.. ....+
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 45688999999999999999998865554 999999999998877777888888877666555554322211 11334
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHH-----HHHHHHHHHHHHHhhcC--Ch
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSS-----MGGVLGNLLVGFAIDRF--SP 151 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~g~~ig~~l~~~l~~~~--g~ 151 (408)
..+....+.+++.++..++..++..+..++.+ +|.+..++...+.+ ++..++|.+++..-+.. +|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~--------~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~ 182 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ--------SRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVY 182 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhH
Confidence 45556678889999999888898888887755 47777766654433 44455555554321111 12
Q ss_pred hhHHHHHHHHHHHHHHHhh-hcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEE
Q 015348 152 PSMFLFFGLLVVLQFFITI-AVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQT 230 (408)
Q Consensus 152 ~~~f~i~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (408)
.....+.+++.++..+... ..||+++++.+ +.+.++. .++.+|||.++...+..++............++|.+
T Consensus 183 ~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~---~~~~~~~---~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (448)
T PRK09848 183 HFWTIVLAIAGMVLYFICFKSTRENVVRIVA---QPSLKIS---LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVR 256 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEeccCCCcc---CCCHHHH---HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEe
Confidence 1112222333333222222 35665432221 1223333 445589999888777666645544455556777788
Q ss_pred eccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHH
Q 015348 231 QNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSL 310 (408)
Q Consensus 231 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
+.+|.++...++......++.+++.++.+++.||+++|+.+..+.++..+..+...+ ......+......+
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~---------~~~~~~~~~~~~~~ 327 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW---------VSVWSLPVALVALA 327 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH---------cCchhHHHHHHHHH
Confidence 888877766555555556778889999999999999999988887666555433221 01111222333344
Q ss_pred HHHHHHHhhhhH-HHHHHHhcCCc-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 015348 311 LEVMFFFKILPF-SVYIAQVCPPG-------CEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTG 368 (408)
Q Consensus 311 ~~~~~~~~~~~~-~~~~~~~~p~~-------~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~ 368 (408)
..+++.....+. .++.++..|++ ++|..+|+.+....+|..+|+.+.|.+.+..|++.
T Consensus 328 l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~~ 393 (448)
T PRK09848 328 IASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIA 393 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 556665555555 77878877654 46999999999999999999999999999988753
No 76
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=1.1e-26 Score=220.95 Aligned_cols=372 Identities=10% Similarity=0.068 Sum_probs=233.1
Q ss_pred cCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCc--chHHHHHHHHHHH
Q 015348 11 LNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSS--ISIFTMSLFLLLS 87 (408)
Q Consensus 11 l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 87 (408)
.+.++.+.+++.+...++.++ ++++|+++|| +|||+.+..+.++..++.+++++++... .+++.+++.|++.
T Consensus 51 ~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-----~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~ 125 (502)
T TIGR00887 51 GPLPSSVSAAVNGSASIGTLAGQLFFGWLADK-----LGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWL 125 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHH
Confidence 355677888899888887777 9999999999 9999999999999999988888776211 1278899999999
Q ss_pred HHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh--------------------
Q 015348 88 NLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-------------------- 147 (408)
Q Consensus 88 g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-------------------- 147 (408)
|++.+...+....++.|++|+++ |++..++.+....+|.++++.++..+..
T Consensus 126 G~~~g~~~~~~~~~~~e~~p~~~---------Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (502)
T TIGR00887 126 GVGIGGDYPLSAIITSEFATKKW---------RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCV 196 (502)
T ss_pred HHHHhhhhHHHHHHHHHhcChhh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccc
Confidence 99999999999999999999864 9999999999999999999988876532
Q ss_pred ---cCChhhHHHHHHHHHHHHHHHhhhccccccc---CCCCCc-----------------chh-------HHHHHHHHHH
Q 015348 148 ---RFSPPSMFLFFGLLVVLQFFITIAVRESALK---LPKSQS-----------------NVG-------IRAQLSELSA 197 (408)
Q Consensus 148 ---~~g~~~~f~i~~~~~~~~~~~~~~~~e~~~~---~~~~~~-----------------~~~-------~~~~~~~~~~ 197 (408)
.++||++|.+.+++.++..+..+++||+|+. +.++++ .++ .++...++++
T Consensus 197 ~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
T TIGR00887 197 PAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSD 276 (502)
T ss_pred chhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHH
Confidence 2479999988888777776767779998652 111000 000 0000012333
Q ss_pred hccc---chhHHHHHH----HHhhhcccccccceeEEEEEeccCCChhhHH-----------H-HHHHHHHHHHHHHHHH
Q 015348 198 ALRK---PEIMYSVAW----FAASYSIIPVLTGTMFFYQTQNLKIRSSVLG-----------I-SKVFGQAAMLLWGVIY 258 (408)
Q Consensus 198 ~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g-----------~-~~~~~~~~~~~~~~~~ 258 (408)
.+++ +..++..+. .+...........+.|.+. ++.|++....+ . ......++.+++.++.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 355 (502)
T TIGR00887 277 FFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL-SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVT 355 (502)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHH-HHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 121121111 1111111112222233333 34566543211 1 2334455677788999
Q ss_pred HHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHH
Q 015348 259 NSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGS 337 (408)
Q Consensus 259 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~ 337 (408)
+++.||+|||+.+..+..+..+........... .+... ......+...+......+. +.+..|..|++.|++
T Consensus 356 ~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~ 428 (502)
T TIGR00887 356 VFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH------LSTHG-FLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRST 428 (502)
T ss_pred HHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh------cchhH-HHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHH
Confidence 999999999998877766655544332211100 00110 1111111112222233444 677899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCCchHHHHHHHHhhhhhhhhhhhccCCCCCCcchh
Q 015348 338 IMAFVMSAVALAFIVSGYLGVALASYTGVTGD---DFSGLPLALIIQAVCTILPLYWSYFMPDGVKSKTTK 405 (408)
Q Consensus 338 ~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (408)
..|+.+.+.++++.++|.+.+.+.+..+.+.. ... ....+.+.+++.++..+..+++||+++++.+|
T Consensus 429 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~i~~~~lpEt~~~~lee 498 (502)
T TIGR00887 429 AHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIW-MGHVLEIFALFMFLGILFTLLIPETKGKSLEE 498 (502)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhcccccccccccccc-chHHHHHHHHHHHHHHHHheEeccCCCCCHHh
Confidence 99999999999999999999999875432100 011 11122222222233333445678877655443
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=9.3e-27 Score=212.09 Aligned_cols=322 Identities=14% Similarity=0.066 Sum_probs=229.3
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
..+++|+|.|+++.|++.+...+.+.+ +++.|+++|| +|||+.+..+.+...++.+.+ ..+ +.+.+++.
T Consensus 24 p~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~~~~~~~-~~~----~~~~l~~~ 93 (355)
T TIGR00896 24 PQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-----FGEERSVAAGLLLIAAGILIR-SAP----GTALLFAG 93 (355)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCchHHHHHHHHHHHHHHHHH-Hhc----cHHHHHHH
Confidence 357789999999999999999988777 9999999999 999999999988887777766 556 78888999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC--ChhhHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF--SPPSMFLFFGLL 161 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~--g~~~~f~i~~~~ 161 (408)
|++.|++.+...+...+.+.|..++ +|+++++..+...++|..+++.+++.+.+.. +||+.|.+.+..
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~ 163 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFPQ----------RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALP 163 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCcc----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 9999999999888877777777653 4899999999999999999999999887764 399998877655
Q ss_pred HHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHH
Q 015348 162 VVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLG 241 (408)
Q Consensus 162 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 241 (408)
.++... .++||.+++++++++. .+ +..++.+|+|.++...+...+..........+.+.|.+ +.|.+..+.+
T Consensus 164 ~~~~~~--~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~g~~~~~~g 235 (355)
T TIGR00896 164 ALLALL--AWIPQVRRRVAANQTT--TR---LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILI-SHGASAATAG 235 (355)
T ss_pred HHHHHH--HHhhhhccccCCCCCC--CC---CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHH
Confidence 443322 2234433222111110 00 11234477888776655444433333333444555554 4799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCC-ceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhh
Q 015348 242 ISKVFGQAAMLLWGVIYNSGLKSVSP-RKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKIL 320 (408)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (408)
...+...++.+++.++.+++.||++. |+.+..+.....+..+...+ ...+. . .......+++.+...
T Consensus 236 ~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~-~~~~~l~g~~~g~~~ 303 (355)
T TIGR00896 236 SLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF---------APMHG--L-WAWALVLGLGQGGAF 303 (355)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH---------hhhhH--H-HHHHHHHHHhhhhHh
Confidence 99999999999999999999999954 44544544444443322111 00011 1 112344566666666
Q ss_pred hH-HHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 321 PF-SVYIAQVC-PPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 321 ~~-~~~~~~~~-p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
|. .+...+.. +++++++..++.+...+++..++|.+.|.+.|+.|.
T Consensus 304 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 304 PLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 66 55555444 456789999999999999999999999999998874
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=2.5e-27 Score=218.99 Aligned_cols=336 Identities=13% Similarity=0.094 Sum_probs=219.8
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHH---HhccC-cchH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIA---ILSQS-SISI 77 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~---~~~~~-~~~~ 77 (408)
++.|+++++|.|+.+.|++.+...+...+ +|++|+++|| +|||+.++.+....++...... +.+.. ....
T Consensus 25 ~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-----~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (396)
T TIGR00882 25 FPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-----LGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNIL 99 (396)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 35678889999999999999999987777 9999999999 9999999877665554433221 11100 0023
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHH
Q 015348 78 FTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLF 157 (408)
Q Consensus 78 ~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i 157 (408)
....+.+++.|++.+...+..+++..+..++ +++..+......++|.++||.+++.+.+ .+||.+|++
T Consensus 100 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~ 167 (396)
T TIGR00882 100 VGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN-----------SNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWL 167 (396)
T ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHhhhh-----------cccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHH
Confidence 3445667788888877777776666554332 3334455555889999999999998865 599999999
Q ss_pred HHHHHHHHHHHhhh-cccccccCCCCCc--chhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEecc-
Q 015348 158 FGLLVVLQFFITIA-VRESALKLPKSQS--NVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNL- 233 (408)
Q Consensus 158 ~~~~~~~~~~~~~~-~~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (408)
.+++.++..+..+. .||++++++.+++ +++.++..++.++.+|||.++...+..+.............+.|..+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~ 247 (396)
T TIGR00882 168 GSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFA 247 (396)
T ss_pred HHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88888777655555 4443222111000 0011112344566789998876665544423222222222333333322
Q ss_pred --CCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHH
Q 015348 234 --KIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLL 311 (408)
Q Consensus 234 --g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
+.+....|.......+...++....+++.||+++|+.+..+..+.++...... ...+.+.+......
T Consensus 248 ~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~-----------~~~~~~~~~~~~~l 316 (396)
T TIGR00882 248 TPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSS-----------FATTALEVVILKML 316 (396)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH-----------hcCChHHHHHHHHH
Confidence 55666788888888888899999999999999999988777666555443311 11222233334444
Q ss_pred HHHHHHhhhhH-HHHHHHhcCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 312 EVMFFFKILPF-SVYIAQVCPPGCEGSIMAF-VMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~-~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+++....... ..+..+..|++.+++..+. .+...++|+.+++.++|++.|..|+
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~ 373 (396)
T TIGR00882 317 HAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGF 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhccc
Confidence 45444333222 4456677788888887776 6788999999999999999998875
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=1.5e-26 Score=240.79 Aligned_cols=337 Identities=11% Similarity=0.037 Sum_probs=238.5
Q ss_pred hccCCCH-HHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHH---HHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 9 DSLNVDP-STLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAI---GAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 9 ~~l~~s~-~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
++.+.+. ...++..+++.+++++ +|++|.++|| ++||+++.. ..+......+.....+ +++++++.
T Consensus 44 ~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr-----~~rk~~~~~~~~~~~~~~~~~~~~~~~~----s~~~l~~~ 114 (1140)
T PRK06814 44 GALGAYNNALVTLAGAVFILPFFIFSALAGQLADK-----YDKAKLAKILKFAEIGIAALAIYGFHLN----SVPLLFAA 114 (1140)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhh-----ccHHHHHHHHHHHHHHHHHHHHHHHHHh----hHHHHHHH
Confidence 3344433 4577777788888877 9999999999 999997643 2222222222223335 89999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
|+++|++.++..++..+++.++.++++ |++++++.+++.++|.++||.++|++....+|++.|+...+..+
T Consensus 115 ~~l~gi~~a~~~p~~~a~l~~~~~~~~---------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~ 185 (1140)
T PRK06814 115 LFLMGIHSALFGPIKYSILPDHLNKDE---------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAV 185 (1140)
T ss_pred HHHHHHHHHhhchHHHHhhHhhcCccc---------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 999999999999999999999999864 99999999999999999999999999999999999955555555
Q ss_pred HHHHHhhhcccccccCCCCC-cchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHH
Q 015348 164 LQFFITIAVRESALKLPKSQ-SNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGI 242 (408)
Q Consensus 164 ~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 242 (408)
+..+..+++++++..+.+.+ +....++....++...++|.++...+..++.+........+.+.|..+.+|.++...|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~ 265 (1140)
T PRK06814 186 LGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATL 265 (1140)
T ss_pred HHHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHH
Confidence 55555566776643322211 11112223334556678888888777666545544455566777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhccc---ccc------cCcCceEeehhhhHHHHH
Q 015348 243 SKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGV---YRE------MGVPDSLYVLIFSSLLEV 313 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~~~~~~~~ 313 (408)
+.+...++.+++.++.+++.|+..+++.+..+.++.++..+...+..... ... +......+.+.+..+..+
T Consensus 266 ~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 345 (1140)
T PRK06814 266 FLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLA 345 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHH
Confidence 99999999999999999999887776666555544444332211100000 000 000122223344445555
Q ss_pred HHHHhhhh-HHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 314 MFFFKILP-FSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 314 ~~~~~~~~-~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
++.+...+ ..+++++.+|++.+|+++|+.++..+++..+++.+.|.+.+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 346 AAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65554444 489999999999999999999999999999999999988753
No 80
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=3e-27 Score=222.66 Aligned_cols=244 Identities=11% Similarity=0.037 Sum_probs=181.0
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
++++++|+|+.+.+++.+...+.+.+ +++.|+++|| +|||+++..+.+..+++.+++++.+ +++.+++.|
T Consensus 61 ~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-----~G~r~~~~~~~~~~~~~~~~~~~~~----s~~~l~~~r 131 (476)
T PLN00028 61 IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-----YGPRYGSAFLLMLTAPAVFCMSLVS----SATGFIAVR 131 (476)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCChHHHHHHHHHHHHHHHHHHHhc----CHHHHHHHH
Confidence 57789999999999998888877776 8999999999 9999999999999999988888888 899999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh---------cCChhhHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID---------RFSPPSMF 155 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~---------~~g~~~~f 155 (408)
++.|++.+...+ ...++.|+.|++ +||+++++.+...++|..+++.+.+.+.. ..|||+.|
T Consensus 132 ~l~G~~~~~~~~-~~~~i~~~~~~~---------~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f 201 (476)
T PLN00028 132 FFIGFSLATFVS-CQYWMSTMFNGK---------IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAF 201 (476)
T ss_pred HHHHHHHHhhHH-HHHHHHHhcChh---------heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHH
Confidence 999999886544 446788999875 49999999887777888777666654432 25899999
Q ss_pred HHHHHHHHHHHHHhhhcccccccCC-C---CCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEe
Q 015348 156 LFFGLLVVLQFFITIAVRESALKLP-K---SQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQ 231 (408)
Q Consensus 156 ~i~~~~~~~~~~~~~~~~e~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (408)
++.+++.++..+..+++++++++.+ + ++.+.+.++..+.+++.++++.+|...+..+...........+.+.|..+
T Consensus 202 ~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 281 (476)
T PLN00028 202 FVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYD 281 (476)
T ss_pred HHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 9999888777666555443322111 0 00000011112334555788887776655444333223334445566666
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 015348 232 NLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPR 268 (408)
Q Consensus 232 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~ 268 (408)
+.|++..+.+....+..++.+++.++.|+++||+++|
T Consensus 282 ~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 282 RFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 7899999999999999999999999999999998765
No 81
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.7e-28 Score=210.63 Aligned_cols=328 Identities=16% Similarity=0.176 Sum_probs=253.4
Q ss_pred ccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 015348 10 SLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSN 88 (408)
Q Consensus 10 ~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 88 (408)
+.+-+.+++|++.+...+..++ +|+.|.+.|| .|+|-.+++|......+++++++.. +++.+++.|.++|
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-----iGy~ipm~~Gl~vmf~sTilFafg~----sy~~l~vAR~LQg 170 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-----IGYKIPMVAGLFVMFLSTILFAFGN----SYPMLFVARSLQG 170 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-----hccccHHHHHHHHHHHHHHHHHHcc----hhHHHHHHHHHhh
Confidence 4566779999999999866665 9999999999 9999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHH
Q 015348 89 LGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFI 168 (408)
Q Consensus 89 ~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 168 (408)
+|.++.++...++++|.+|+++ +|+++++..-.+.++|.++||.+||.+++..|.+.+|++.+.++++...+
T Consensus 171 vgsA~~~tsglamlAd~f~~d~--------er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L 242 (464)
T KOG3764|consen 171 VGSAFADTSGLAMLADVFPEDN--------ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGAL 242 (464)
T ss_pred hhHHHHHhhhHHHHHHHcccch--------hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHH
Confidence 9999999999999999999987 69999999999999999999999999999999999999999999998888
Q ss_pred hhhcccccccCC-CCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHH
Q 015348 169 TIAVRESALKLP-KSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFG 247 (408)
Q Consensus 169 ~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 247 (408)
.+++-|+.+.++ +.+ +-+++++++++|.++.........+..........+.|..+.+..+..+.|......
T Consensus 243 ~l~vi~p~~~~~~~~~-------~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~ 315 (464)
T KOG3764|consen 243 QLLVIEPTEMDPDSTE-------QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPA 315 (464)
T ss_pred HHheeCccccCccccc-------cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccc
Confidence 777544432222 211 122345668899888776666565666666777777778888886667999999889
Q ss_pred HHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHH-hHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhHHHHH
Q 015348 248 QAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMIS-DVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPFSVYI 326 (408)
Q Consensus 248 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (408)
.+...++..+.+++.||+++.+.+.....+......+ ...+... ....+.......+..+.......|...++
T Consensus 316 ~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~------~~~L~vp~~~l~~~i~~~dasl~P~l~~l 389 (464)
T KOG3764|consen 316 SLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATS------IAQLWVPNFGLGFGIGLADASLIPTLGYL 389 (464)
T ss_pred ccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhh------HHHHhhhhHHHHHHHHHHHHHHhhhhHHh
Confidence 9999999999999999999555443332222222111 1111110 11111111222333334456667775555
Q ss_pred HHhcCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 327 AQVCPPG---CEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 327 ~~~~p~~---~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
.+....+ ..|.++++......+|..+||.++|.+.+..|..
T Consensus 390 vd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~ 433 (464)
T KOG3764|consen 390 VDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFE 433 (464)
T ss_pred cchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHH
Confidence 5554444 7799999999999999999999999999998864
No 82
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=7.5e-26 Score=206.76 Aligned_cols=329 Identities=10% Similarity=0.036 Sum_probs=223.5
Q ss_pred hhhh-ccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh-ccCcchHHHHHH
Q 015348 6 FLKD-SLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL-SQSSISIFTMSL 82 (408)
Q Consensus 6 ~l~~-~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (408)
.+.+ |+|+|++|.+++.++..+.+.+ +++.|.+.|| +|.|+++.++.++..+..+.+++. ++...+++.+++
T Consensus 59 ~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr-----~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli 133 (462)
T PRK15034 59 NLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI-----FGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV 133 (462)
T ss_pred HhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence 4444 8999999999999999877666 7888999999 999999999999999999988876 111128999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh-----h----------
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAI-----D---------- 147 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~-----~---------- 147 (408)
.|++.|++ +...+.....+.++.|+++ ||+++++.....++|..+++.+...+. +
T Consensus 134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~---------rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~ 203 (462)
T PRK15034 134 IALLCGFA-GANFASSMGNISFFFPKAK---------QGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQA 203 (462)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHCCHhH---------hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 99999998 5566667799999998764 999999997777777776666554433 2
Q ss_pred ---cCChhhHHHHHHHHHHHHHHHhhh-cccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccc
Q 015348 148 ---RFSPPSMFLFFGLLVVLQFFITIA-VRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTG 223 (408)
Q Consensus 148 ---~~g~~~~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (408)
..+||...++..++.++..+..++ .+++++. + ...++..+.+|+|+.|...+..+..+..+..+..
T Consensus 204 ~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-~---------~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~ 273 (462)
T PRK15034 204 DGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-R---------ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSA 273 (462)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-c---------cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHH
Confidence 233677777777766666555444 3433221 1 1134445569999999998888876666665655
Q ss_pred eeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEe
Q 015348 224 TMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLY 303 (408)
Q Consensus 224 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
+.|+|.++.+ +.........+..+...+..++.|+++||+|+++++.++.+...+............ .....+
T Consensus 274 ~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~-----~~~~~~ 346 (462)
T PRK15034 274 GFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT-----GSGNFI 346 (462)
T ss_pred HHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc-----cccHHH
Confidence 6666655533 333333334455677888889999999999999998888776665543322211100 001111
Q ss_pred ehhhhHHHHHHH-HHhhhhHHHHHHHhcCC---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 304 VLIFSSLLEVMF-FFKILPFSVYIAQVCPP---------------------GCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 304 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~---------------------~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
......+..++. ........-++.++.|+ ++.|.+.|+....+.+|+++-|.+.|...
T Consensus 347 ~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~ 426 (462)
T PRK15034 347 AFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSL 426 (462)
T ss_pred HHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHH
Confidence 111111111111 12222334455555553 26788999999999999999999989988
Q ss_pred HhcCC
Q 015348 362 SYTGV 366 (408)
Q Consensus 362 ~~~g~ 366 (408)
+..|.
T Consensus 427 ~~~g~ 431 (462)
T PRK15034 427 NMTGS 431 (462)
T ss_pred HHcCC
Confidence 88764
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=1.1e-25 Score=235.13 Aligned_cols=329 Identities=11% Similarity=0.022 Sum_probs=234.2
Q ss_pred hhhhhccCCC--HHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHH---HhccCcchHH
Q 015348 5 FFLKDSLNVD--PSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIA---ILSQSSISIF 78 (408)
Q Consensus 5 ~~l~~~l~~s--~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~---~~~~~~~~~~ 78 (408)
.++..+++.+ ....+++.+++.+++.+ ++++|+++|| +|||++++.+.++..+..++.. ... +++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-----~grk~~l~~~~~~~~~~~~~~~~~~~~~----~~~ 104 (1146)
T PRK08633 34 NTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK-----FSKNRVIRIVKLFEVGLTLLIVLAYYLG----WFW 104 (1146)
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHc----cHH
Confidence 3444556654 35578888888888777 9999999999 9999999988776555554433 335 789
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--------C-
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR--------F- 149 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~- 149 (408)
.+++.|++.|++.+...+...+++.|+.++++ |++++++...+.++|.++|+.+++++.+. +
T Consensus 105 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~ 175 (1146)
T PRK08633 105 LAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN---------LSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEIL 175 (1146)
T ss_pred HHHHHHHHHHHHHHhhchHHHhhhHHhcCccc---------chhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 99999999999999999999999999999854 99999999999999999999999999875 2
Q ss_pred ChhhHHHHHHHHHH-HHHHHhhhcccccccCCCC---CcchhHHHHHHHHHHhcccchhHHHHHHHHhhhccccccccee
Q 015348 150 SPPSMFLFFGLLVV-LQFFITIAVRESALKLPKS---QSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTM 225 (408)
Q Consensus 150 g~~~~f~i~~~~~~-~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (408)
+|++.+.+..+... +..+..+.+||.+...... ++....++..+.++..+++|.++..++..++.+..........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (1146)
T PRK08633 176 GRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANF 255 (1146)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444333332 2333344566654332221 1111222333445556788887776655555344444445556
Q ss_pred EEEEEeccCCChh-hHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEee
Q 015348 226 FFYQTQNLKIRSS-VLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYV 304 (408)
Q Consensus 226 ~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (408)
+.|..+.+|.+.. ..|++.....++.+++.++.+++.||+++++.+.++.++.++..+...+ ....+.
T Consensus 256 ~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 324 (1146)
T PRK08633 256 PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPT-----------APSLAS 324 (1146)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHH-----------hhhHHH
Confidence 6677777899988 8999999999999999999999999999888777666555544333211 112223
Q ss_pred hhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 305 LIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
.....+..+++.+...+. .+++++..|++.||+++|+.+.+.+++..+++.+++.+..
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 325 VLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555555444444 8888999999999999999999999999888887776654
No 84
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=1.7e-25 Score=206.38 Aligned_cols=329 Identities=11% Similarity=0.061 Sum_probs=229.5
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
...+++++|.|+.|.|++.+...+++.+ +++.|++.|| +|||+.+..+..+.+++.+++..... ..+++.+++
T Consensus 26 ~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-----~G~r~~~~~g~~l~~~g~~l~~~~~~-~~~~~~~l~ 99 (410)
T TIGR00885 26 VPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-----LSYKAGILLGLFLYALGAFLFWPAAE-IMNYTLFLV 99 (410)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHH
Confidence 3456899999999999999999988877 9999999999 99999999999999988877644321 127899999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--------------
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-------------- 148 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-------------- 148 (408)
.|++.|++.+...+..++++.+..|+++ |++..+..+...++|..+||.+++.+...
T Consensus 100 ~~~l~G~g~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~ 170 (410)
T TIGR00885 100 GLFILTAGLGFLETAANPYILVMGPEST---------ATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLS 170 (410)
T ss_pred HHHHHHhhHHHHHhhhhHHHHHHCCHhH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcC
Confidence 9999999999999999999999887653 77888888999999999999998877532
Q ss_pred ------------CChhhHHHHHHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhc
Q 015348 149 ------------FSPPSMFLFFGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYS 216 (408)
Q Consensus 149 ------------~g~~~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (408)
.+||++|++.+++.++..+...+.++++.++++ +++++.++ +.++.+|+|.++...+..++...
T Consensus 171 ~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~l~~f~yvg 246 (410)
T TIGR00885 171 PEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSD-AKQISFSA---SLSRLARIRHYREGVIAQFFYVG 246 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cccccchh---hHHHHHhChhHHHHHHHHHHHHH
Confidence 359999999888776665444333333211111 11111222 22345788888776666666333
Q ss_pred ccccccceeEEEEEec-cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccc
Q 015348 217 IIPVLTGTMFFYQTQN-LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYRE 295 (408)
Q Consensus 217 ~~~~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (408)
......+..+.|..+. .+.+....+........+..+|.++.+++.||+++|+.+..+.....+..++...
T Consensus 247 ~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~-------- 318 (410)
T TIGR00885 247 VQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF-------- 318 (410)
T ss_pred HHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH--------
Confidence 3333334444444332 2334444444455555677889999999999999998887776666655444221
Q ss_pred cCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 296 MGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.+.. .........+++.....|. .++..+..+++.+....++.++. +|+.+.|.+.|.+.|..|
T Consensus 319 --~~~~--~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~ 383 (410)
T TIGR00885 319 --AGGH--VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKE 383 (410)
T ss_pred --cCCh--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhc
Confidence 1111 1122333344445445577 88888888877655455555443 999999999999999764
No 85
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5.5e-25 Score=200.04 Aligned_cols=369 Identities=16% Similarity=0.131 Sum_probs=258.7
Q ss_pred hccC--CCHHHHHHHHHhh----cccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 9 DSLN--VDPSTLQLLQNSA----NLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 9 ~~l~--~s~~~~g~~~~~~----~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
+++| .|+++..++.+.. .++.++ +.+.|.++|| +|||..+.++.++..++.+++.++... .++..++
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~-----~GRK~~l~~~~~l~~~~~~~~~~s~~~-~~~e~li 120 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADR-----FGRKNALLLSNLLAVLAALLMGLSKSA-PSFEMLI 120 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hcchHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHH
Confidence 4455 6666666555544 466666 8899999999 999999999988887777776654422 2899999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGF--AIDRFSPPSMFLFFG 159 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~--l~~~~g~~~~f~i~~ 159 (408)
+.|++.|+..+.......-++.|..|++ .||........+..+|.+++..++.- +-+...|++.+....
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~---------~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKN---------LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPL 191 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhh---------hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHH
Confidence 9999999999999999999999999986 49999998888889998888766532 223456999999999
Q ss_pred HHHHHHHHHhhhcccccccCCC---C---------------CcchhH-------H-H-----HHHHHHHhcccchhHHHH
Q 015348 160 LLVVLQFFITIAVRESALKLPK---S---------------QSNVGI-------R-A-----QLSELSAALRKPEIMYSV 208 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~~~~~~~---~---------------~~~~~~-------~-~-----~~~~~~~~~~~~~~~~~~ 208 (408)
++.++..+...++||+|+.--. + +.+++. + + ...++++.++||..+...
T Consensus 192 i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~ 271 (485)
T KOG0569|consen 192 IPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPL 271 (485)
T ss_pred HHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHH
Confidence 9999998889999999763110 0 000000 0 0 111356778888777764
Q ss_pred HHHHhhhcccccccce-eEEEEE---eccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHH
Q 015348 209 AWFAASYSIIPVLTGT-MFFYQT---QNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMIS 284 (408)
Q Consensus 209 ~~~~~~~~~~~~~~~~-~~~~~~---~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 284 (408)
...+.....+...... ..+|.+ +..|++..+.-+.....++...+..++...+.||.|||+++..+..++.+..+.
T Consensus 272 ~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 272 LIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 4443322222222222 222222 235889999999999999999999999999999999999999988888777544
Q ss_pred hHhhhcccccccCcCceEeehhhhHHHHH-HHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 285 DVLFVKGVYREMGVPDSLYVLIFSSLLEV-MFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
........+. .. +...+..+...+.+. ....+..|+ +-+.+|++|++.|.++++....+..+.+++-......+.+
T Consensus 352 ~~~~~~l~~~-~~-~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~ 429 (485)
T KOG0569|consen 352 MSIALFLSNS-FG-SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN 429 (485)
T ss_pred HHHHHHHHHH-hh-hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3321111111 11 011111122222222 223455678 8899999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCchHHHHHHHHhhhhhhhhhhhccCCCCCCc
Q 015348 363 YTGVTGDDFSGLPLALIIQAVCTILPLYWSYFMPDGVKSK 402 (408)
Q Consensus 363 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (408)
.+|. +.++.....+.+..+..++++||++++.
T Consensus 430 ~~g~--------~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 430 VIGP--------YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred Hhcc--------hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 8874 2333444455556677788999988654
No 86
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=3.2e-27 Score=205.73 Aligned_cols=336 Identities=13% Similarity=0.109 Sum_probs=256.2
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcc-cccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANL-PMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~-~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
+...+++|+|+|+.|.+++.+++.+ +..+..+.|.+.|| +|.|++..++.++..+-.+..+++... .++|+++
T Consensus 36 l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-----fGgR~~~~~s~~l~~IP~~~~~~a~~~-~~~~~ll 109 (417)
T COG2223 36 LGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-----FGGRKWTILSMLLLLIPCLGLAFAVTY-PSTWQLL 109 (417)
T ss_pred HHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-----cCchHHHHHHHHHHHHHHHHHHHHccC-CchHHHH
Confidence 4567889999999999999999995 45559999999999 999999999999999998888887632 2557999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC---hhhHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS---PPSMFLFF 158 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g---~~~~f~i~ 158 (408)
+.+.+.|++.+...+.. +.+++++|+|+ +|.++++.. .+|+|..+...++..+....+ |+....+.
T Consensus 110 ~~gll~G~~GasFav~m-~~~s~~fP~~~---------qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~ 178 (417)
T COG2223 110 VIGLLLGLAGASFAVGM-PNASFFFPKEK---------QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIY 178 (417)
T ss_pred HHHHHHhcccceehccc-ccccccCChhh---------hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999999988877766 88999999874 999999998 999999999999999998888 99998888
Q ss_pred HHHHHHHHHHh-hhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCCh
Q 015348 159 GLLVVLQFFIT-IAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRS 237 (408)
Q Consensus 159 ~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (408)
.+..++..+.. +..+|.++.+...++ .+. .+++...+||+.|.+.+..+..+..+..+..+.+.|++++++.++
T Consensus 179 ~~~l~v~~v~~~~~~~d~p~~r~~~~~---~~~--~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~ 253 (417)
T COG2223 179 VVALAIAAVLAWLGMNDVPEHRASVKP---QLP--AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSP 253 (417)
T ss_pred HHHHHHHHHHHHHHhCCChhhhccccc---cch--hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 88777765544 446665553222111 110 344555889999999999988777777888888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHH-HH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVM-FF 316 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 316 (408)
...|.......+.+.+...+.|+++||+|.+|.+......++++........... +............+..++ ..
T Consensus 254 ~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~l~l~~~~G 329 (417)
T COG2223 254 VTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGF----GHGGSFVVFVAVFLALFVFAG 329 (417)
T ss_pred hhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccc----ccCcchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999988888777776654432211100 000111111111111111 11
Q ss_pred HhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 317 FKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 317 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
...-....++..+.| ++.|.+.|+....+++|+..-|...|...+..|
T Consensus 330 ~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 330 LGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred cCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcc
Confidence 222233445555555 478999999999999999999999999999887
No 87
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.94 E-value=1.9e-26 Score=211.14 Aligned_cols=318 Identities=12% Similarity=0.069 Sum_probs=216.7
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.++++++|+|+.+.+++.+...+...+ ++++|+++|| +|||+.+..+.++..++.+++.+.+ .+++.+++.
T Consensus 26 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-----~g~r~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~ 97 (366)
T TIGR00886 26 QMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-----FGPRYTTTLSLLLLAIPCLWAGLAV---QSYSVLLLL 97 (366)
T ss_pred HHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHH
Confidence 358899999999999999999988777 9999999999 9999999999999999988887754 168888999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh----------cCChhh
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID----------RFSPPS 153 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~----------~~g~~~ 153 (408)
|++.|++.+.. +...+++.|+.|+++ |++.+++.....++|..+++.+++.+.. ..+||+
T Consensus 98 ~~~~g~~~~~~-~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~ 167 (366)
T TIGR00886 98 RLFIGIAGGSF-ASCMPWISFFFPKKI---------QGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGW 167 (366)
T ss_pred HHHHHHhchhh-HhHHHHHHHhcCHhh---------hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 99999987765 445688999988754 8999998888888888888877776654 348999
Q ss_pred HH-HHHHHHHHHHHHH-hhhcccccccCCCCCcch-------hHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccce
Q 015348 154 MF-LFFGLLVVLQFFI-TIAVRESALKLPKSQSNV-------GIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGT 224 (408)
Q Consensus 154 ~f-~i~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (408)
.| ...++...+..+. ..+.+|++++++++++.+ ..++..++.++.+++|.++...+..+............
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (366)
T TIGR00886 168 AFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSI 247 (366)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Confidence 99 4445444443333 334555443221111100 01112224556688888777666555534333344455
Q ss_pred eEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCc-eEe
Q 015348 225 MFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPD-SLY 303 (408)
Q Consensus 225 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 303 (408)
.+.|..+.+|+++.+.+.......+..+++.++.+++.||+++|+....+.............. ..++ ...
T Consensus 248 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 319 (366)
T TIGR00886 248 FAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLG--------LVSPLSLA 319 (366)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhc--------CCCcchHH
Confidence 6667777789999999988888889999999999999999999887766655444433222110 0000 111
Q ss_pred ehhhhHHHHHHHHHhh-hhHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 015348 304 VLIFSSLLEVMFFFKI-LPFSVYIAQVCPPGCEGSIMAFVMSAVALA 349 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg 349 (408)
.............+.. .+......+..| +++|+++|+.++..++|
T Consensus 320 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 320 VFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 1111122222222222 233566677776 68999999998887765
No 88
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=4.7e-25 Score=200.69 Aligned_cols=333 Identities=17% Similarity=0.175 Sum_probs=234.3
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.|+ ++.|+|++|+|.+.+...+..++ +|++|.++||. ..+|+.+.+..++.++........+ +++.++
T Consensus 25 ~~~~L-~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~----~~~~~~l~~~~l~~~~~~~~~~~~~----~f~~~~ 95 (400)
T PF03825_consen 25 LPLYL-ESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRF----GSAKRILALLSLLSALALLLLAFSS----SFWWLF 95 (400)
T ss_pred HHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHh----hhHHHHHHHHHHHHHHHHHHHHHhc----cHHHHH
Confidence 35677 56789999999999999977777 88999999992 3577888787777777766666666 888888
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHH-HHHHhhcCC---hhhHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLL-VGFAIDRFS---PPSMFLF 157 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l-~~~l~~~~g---~~~~f~i 157 (408)
...++..+......+..+++..+..++++ + +.|+... .+++|.+++... ++.+....+ ....+++
T Consensus 96 ~~~~l~~~~~~p~~pl~dsi~~~~~~~~~--~-----~YG~iRl----wGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 96 VIMLLFSFFFSPTMPLSDSIALSYLGDRG--K-----DYGRIRL----WGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHccccc--C-----CCCcchh----hhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 88888888888888888899888887543 2 4565555 777888777544 333333333 2345666
Q ss_pred HHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccC-CC
Q 015348 158 FGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLK-IR 236 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~ 236 (408)
.+...++.....+.+|+.+++++++++ ..+...++.++++|||++...++..++........+...+.|.++ .| .+
T Consensus 165 ~~~~~~ll~~~~l~lp~~~~~~~~~~~--~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~-~gg~~ 241 (400)
T PF03825_consen 165 AAILSLLLAGFALFLPKTPPKRSAKES--VKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQE-LGGYS 241 (400)
T ss_pred HHHHHHHHHHHHHhCCCCccccccCCC--cccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccch
Confidence 665555555555567776532222111 111223344567999998888777777555555555555555444 55 77
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeeh----hhhHHHH
Q 015348 237 SSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVL----IFSSLLE 312 (408)
Q Consensus 237 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 312 (408)
....|...++..+++++.....+++.+|++.++++.++.+..++=..+... .+++.+.. ....+..
T Consensus 242 ~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~----------~~~~~~~~~~~~~l~q~lh 311 (400)
T PF03825_consen 242 GSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAY----------FSDPWPFIVALQLLGQLLH 311 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----------hcCCcHHHHHHHHHHHhhh
Confidence 788888888999999999999999999999999998887776665444221 11121121 1223346
Q ss_pred HHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCC
Q 015348 313 VMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSA-VALAFIVSGYLGVALASYTGVTG 368 (408)
Q Consensus 313 ~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~-~~lg~~ig~~~~g~l~~~~g~~~ 368 (408)
+...+..... ..++.+.+|++.|++++|+++.. ..+|..+|..++|++.|+.|.+.
T Consensus 312 G~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 312 GLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred hHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 6665555555 88999999999999999999887 56999999999999999998654
No 89
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=1e-25 Score=211.44 Aligned_cols=345 Identities=11% Similarity=0.095 Sum_probs=230.2
Q ss_pred hhhhhhhc--cCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHH
Q 015348 3 VNFFLKDS--LNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFT 79 (408)
Q Consensus 3 ~~~~l~~~--l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (408)
++.|++++ +|.|+.+.+.+.+.......+ ++++|+++||. +|||+.+.++.++.+++.+++++.+ +++.
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~----~G~~~~l~~~~~~~~~g~~~~~~~~----~~~~ 104 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRV----WGTKKTMVLGGIVLMLGHFMLAMSI----YPDL 104 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhh----cchHHHHHHHHHHHHHHHHHHHhcc----cHhH
Confidence 46788777 999999999999999865555 89999999992 4999999999999999999988887 7888
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHH
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFG 159 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~ 159 (408)
+++.+.+.|++.+...+...+++.|..|+++. + +|++..++.+...++|.++||.+++++.++.||++.|.+.+
T Consensus 105 ~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~-~-----~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~ 178 (475)
T TIGR00924 105 IFYGLGTIAVGSGLFKANPSSMVGKLYERGDM-P-----RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAA 178 (475)
T ss_pred HHHHHHHHHhccccccCCHHHHHHHhcCCCCc-c-----cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 88999999999999999998999999987542 2 48888999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhhhcccc----cccCCCCCcch-hHHHHH-----------H----------------------------H-
Q 015348 160 LLVVLQFFITIAVRES----ALKLPKSQSNV-GIRAQL-----------S----------------------------E- 194 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~----~~~~~~~~~~~-~~~~~~-----------~----------------------------~- 194 (408)
+..++..+...+.+++ ++++++.++++ +..... + .
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (475)
T TIGR00924 179 VGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLA 258 (475)
T ss_pred HHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655554444333322 11111100000 000000 0 0
Q ss_pred ----HHHhcccc--hhHHHHHHHHhhhcccccccceeEEEEEeccCCChh----hHHHHHHHHHHHHHHHHHHHH----H
Q 015348 195 ----LSAALRKP--EIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSS----VLGISKVFGQAAMLLWGVIYN----S 260 (408)
Q Consensus 195 ----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~g~~~~~~~~~~~~~~~~~~----~ 260 (408)
..+..|+| .+..+.+...+.+.......+..+.+..+..+.+.. ..+++.+++.+..++..++.. +
T Consensus 259 ~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~ 338 (475)
T TIGR00924 259 FKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTR 338 (475)
T ss_pred HhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 00000111 112222222233444334444344443333332211 256777777777777766644 4
Q ss_pred hhcc-CCCceeh--HHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhH
Q 015348 261 GLKS-VSPRKLI--SAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEG 336 (408)
Q Consensus 261 l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g 336 (408)
+.|| .+.+... ..+.++.+++...........+ .+.+.+.++++...+..++++....|. +++..+.+|++.||
T Consensus 339 l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~--~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g 416 (475)
T TIGR00924 339 LGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFAD--AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMG 416 (475)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHH
Confidence 5554 3333333 4555555554433221100000 112345556777888889999988899 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 337 SIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 337 ~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
+++|+......+|..+++.+.....+.
T Consensus 417 ~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 417 QMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999988888888888887766554
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=2.5e-25 Score=208.89 Aligned_cols=341 Identities=13% Similarity=0.125 Sum_probs=223.4
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHH-HH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIF-TM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 80 (408)
+..|+++++|.++++.+++.+.+. ..+...+++|+++||+ +||||.++.+.++..++.+.+++++ +.. .+
T Consensus 37 l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~----~G~r~~~~~g~~~~~~g~~~~~~~~----~~~~ll 108 (489)
T PRK10207 37 LAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHL----LGTKRTIVLGAIVLAIGYFMTGMSL----LKPDLI 108 (489)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhc----cchHHHHHHHHHHHHHHHHHHHHhc----cchhHH
Confidence 456888999999999999988887 5666688999999983 6999999999999999999998876 433 35
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
++.|.+++++.+...+...+++.|.+|+++ + +|++..++.+.+.++|..+||.+++++.++.|||+.|++.++
T Consensus 109 ~~~~~l~~ig~g~~~~~~~~li~~~~p~~~--~-----~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 109 FIALGTIAVGNGLFKANPASLLSKCYPPKD--P-----RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred HHHHHHHHhccccccCCHHHHHHHhcCCCc--h-----hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 578999999999999888999999998765 2 478889999999999999999999999999999999999765
Q ss_pred HHHHHHHHhhhcccc----cccCCCCC-cchhH-----------------HH--HH-----------------H---HHH
Q 015348 161 LVVLQFFITIAVRES----ALKLPKSQ-SNVGI-----------------RA--QL-----------------S---ELS 196 (408)
Q Consensus 161 ~~~~~~~~~~~~~e~----~~~~~~~~-~~~~~-----------------~~--~~-----------------~---~~~ 196 (408)
..++..+.....++. ++++++++ +.... .+ .. . +..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~ 261 (489)
T PRK10207 182 GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLD 261 (489)
T ss_pred HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 444443333333321 11111100 00000 00 00 0 000
Q ss_pred HhcccchhHHHHHH--HHhhhcccccccceeEEEEEecc-----CCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCce
Q 015348 197 AALRKPEIMYSVAW--FAASYSIIPVLTGTMFFYQTQNL-----KIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRK 269 (408)
Q Consensus 197 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 269 (408)
+..|+|.+....++ ..+.+..........+.+..+.. |+.. ....+.....+..++..++.+++.||.++|+
T Consensus 262 ~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i-~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~ 340 (489)
T PRK10207 262 KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSI-NPVSFQALNPFWVVVASPILAGIYTHLGSKG 340 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEE-CHHHHHhHhHHHHHHHHHHHHHHHHHHhhCC
Confidence 12333433322211 11122322223233333332211 2211 1234445555666677777888999988776
Q ss_pred e-------hHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHH
Q 015348 270 L-------ISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAF 341 (408)
Q Consensus 270 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~ 341 (408)
. +..+.++.++..+........... .....+.++++...+..++++....|. .+.+.+.+|++.+|.++|+
T Consensus 341 ~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~-~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~ 419 (489)
T PRK10207 341 KDLSMPMKFTLGMFLCSLGFLTAAAAGMWFAD-AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGM 419 (489)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHH
Confidence 3 555655555443221100000000 011122345566777888998888888 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 015348 342 VMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 342 ~~~~~~lg~~ig~~~~g~l 360 (408)
.+...++|+.+|..++...
T Consensus 420 ~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 420 WFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999998888777655
No 91
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.94 E-value=7.9e-29 Score=217.34 Aligned_cols=341 Identities=16% Similarity=0.096 Sum_probs=224.1
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.-.++++|+++++.|++.+...+.+.+ +|+.|+++|| ++||+++.+|..++.++.++.+++. .+|++.++
T Consensus 57 ~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-----yNR~~v~~vG~~iW~~Av~~~~fs~----~Fwq~~l~ 127 (493)
T KOG1330|consen 57 KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-----YNRKRVIAVGIFIWTLAVFASGFSN----HFWQVLLC 127 (493)
T ss_pred HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-----cCcceEEeeHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 346778999999999999999987776 9999999999 9999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhhHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-PPSMFLFFGLLV 162 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-~~~~f~i~~~~~ 162 (408)
|.+.|+|.+.+.+..+++++|.+|+++ |++..++++.+..+|..+|.+.+..+.+..+ ||+.|+..+++.
T Consensus 128 R~~vGiGeAs~~~ia~s~IaD~f~~~~---------Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~ 198 (493)
T KOG1330|consen 128 RGFVGIGEASYSPIAPSLIADSFPDDK---------RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLG 198 (493)
T ss_pred HHHhccchhhhcccchhHhhhcCcchh---------hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHH
Confidence 999999999999999999999999864 9999999999999999999999998888766 999999999999
Q ss_pred HHHHHHhh-hcccccccCCCCCcc-----hhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeE---EEEEecc
Q 015348 163 VLQFFITI-AVRESALKLPKSQSN-----VGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMF---FYQTQNL 233 (408)
Q Consensus 163 ~~~~~~~~-~~~e~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 233 (408)
++..++.+ +++||++...++.++ .+....+|+++...|+|.+....+-..........+..+.| ++..+..
T Consensus 199 vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~ 278 (493)
T KOG1330|consen 199 VIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELI 278 (493)
T ss_pred HHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHh
Confidence 98876655 477776533222111 12344567776667766544333222221222222222222 2222224
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHhhcc----CCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhH
Q 015348 234 KIRSSVLGISKVFGQAAMLLWGVIYNSGLKS----VSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSS 309 (408)
Q Consensus 234 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
|++....-++..+...++.+|..+.|.++|| +.+........+..+........+...... ......+..+++..
T Consensus 279 ~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~-~~~~s~~~~~il~~ 357 (493)
T KOG1330|consen 279 GFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA-FTSSSMIFGLILFL 357 (493)
T ss_pred CCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHh-hhhHHHHHHHHHHH
Confidence 4444444444444444445555444444444 544334444433333332211111000000 00111111111111
Q ss_pred HHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhc
Q 015348 310 LLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAF-IVSGYLGVALASYT 364 (408)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~-~ig~~~~g~l~~~~ 364 (408)
+........+.+..-+..+++|+++|.+++++...+..+-+ .-+|.+.|.+.|+.
T Consensus 358 ~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 358 VGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 11111112222334567788999999999999988876544 55556999999876
No 92
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.94 E-value=4.8e-24 Score=197.63 Aligned_cols=370 Identities=12% Similarity=0.173 Sum_probs=257.8
Q ss_pred HHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHH
Q 015348 17 TLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAE 95 (408)
Q Consensus 17 ~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 95 (408)
..++..++.. +..++.|+.|.++|+ +.+||+++.....+..++..++.+.+ ..+++...+..++..++.....
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~----~~~Rk~~l~~~~~~~~~~~~~l~~v~--~~~~~~~~~l~iia~v~~~~~~ 144 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADY----GGRRKRFLLIFTLLGVLATALLWFVS--PGQWWLALVLFIIANVGYEASN 144 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc----cccchHHHHHHHHHHHHHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHH
Confidence 3455566655 445559999999999 24566666777777777777777754 2366777788889999999999
Q ss_pred hhHHHHHHhhccCCCccchhhc-----------------cCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--------CC
Q 015348 96 VANDALVAEMAKQPMTSSKKAQ-----------------SSSGELQSFVWMSSSMGGVLGNLLVGFAIDR--------FS 150 (408)
Q Consensus 96 ~~~~a~i~~~~~~~~~~~~~~~-----------------~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~g 150 (408)
+..+++++|..+++++.++..+ .+|++..+.-...+++|.++.-.+.-.+... .+
T Consensus 145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~ 224 (477)
T PF11700_consen 145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWA 224 (477)
T ss_pred HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchh
Confidence 9999999999998763110000 0248999988888999998887766555322 23
Q ss_pred hhhHHHHHHHHHHHHHHHhhh-cccccccCCCCCcc----hhHHHHHHHHHHhcccchhHHHHHHHHhhhccccccccee
Q 015348 151 PPSMFLFFGLLVVLQFFITIA-VRESALKLPKSQSN----VGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTM 225 (408)
Q Consensus 151 ~~~~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (408)
.|..+.+.++..++..+..++ +||++.++..++.. ...++..+.+++..|+|+...+++..++..-.........
T Consensus 225 ~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~ 304 (477)
T PF11700_consen 225 IRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFA 304 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588888888888777666554 78776532222222 2234444445555677888888887777454555555555
Q ss_pred EEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCc--eehHHHHHHHHHHHHHhHhhhcccccccCcCceEe
Q 015348 226 FFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPR--KLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLY 303 (408)
Q Consensus 226 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
..|..+++|++..+...+..+..+.+++|+++.+++.||+|.| +++..+.+...+..+...+ .......+..+. +
T Consensus 305 ~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~--G~~~~~~g~~~~-~ 381 (477)
T PF11700_consen 305 GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLF--GFWPSFFGLKSP-W 381 (477)
T ss_pred HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHH--HhhhcccCcccH-H
Confidence 6677788999999999999999999999999999999999998 7776666555444333221 000011223222 2
Q ss_pred ehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHH
Q 015348 304 VLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQA 382 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 382 (408)
.+....+..|+..+...+. .++.+|+.|+++++..+|++......+..+||.+.|.+.+..|..+ ..+....
T Consensus 382 ~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r-------~g~~~l~ 454 (477)
T PF11700_consen 382 EFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQR-------YGFLFLL 454 (477)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch-------hHHHHHH
Confidence 4455566677777766676 8999999999999999999999999999999999999999987432 2233444
Q ss_pred hhhhhhhhhhhccCCCCCCc
Q 015348 383 VCTILPLYWSYFMPDGVKSK 402 (408)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~ 402 (408)
+..++++.++.+++.++.++
T Consensus 455 ~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 455 VLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHhhccchhhhh
Confidence 45555666666666655433
No 93
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=6.6e-26 Score=208.53 Aligned_cols=354 Identities=15% Similarity=0.124 Sum_probs=257.4
Q ss_pred hhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 015348 8 KDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLL 86 (408)
Q Consensus 8 ~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (408)
+++++.|+.|-+++.+....++++ +.+.|+++|| +|-|+++..+.++.+++.++..++. ..+++.+++.|++
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k-----~G~r~v~~~~~~~sa~~t~l~P~aa--~~~~~~~~~~R~l 137 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK-----FGARRVFFISGLISALLTLLTPLAA--SIGFYLLLVLRFL 137 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH-----cCchHHHHHHHHHHHHHHHHHHHHH--HhcchhhHHHHHH
Confidence 457899999999999999999999 8899999999 9999999999999999999988766 2355678999999
Q ss_pred HHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-CChhhHHHHHHHHHHHH
Q 015348 87 SNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-FSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 87 ~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-~g~~~~f~i~~~~~~~~ 165 (408)
+|++.+...++...+...|.|.+| |++..++...+..+|.+++.+++|++.+. +||+..|++.++..++.
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~E---------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~ 208 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNE---------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIW 208 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHH---------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHH
Confidence 999999999999999999999875 99999999999999999999999999998 99999999999999999
Q ss_pred HHHhhh-cccccccCCCCCcch-----------hHHH-HHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEec
Q 015348 166 FFITIA-VRESALKLPKSQSNV-----------GIRA-QLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQN 232 (408)
Q Consensus 166 ~~~~~~-~~e~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (408)
.+++++ ..|+|.+.+.-.++| ..++ ..-..+++++++.+|...+..+.............|.|+.+.
T Consensus 209 ~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~V 288 (466)
T KOG2532|consen 209 FILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEV 288 (466)
T ss_pred HHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 887765 555544322111100 0000 011355669999999999988887777777888899999999
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCc--------eeh-HHHHHHHHHHHHHhHhhhcccccccCcCceEe
Q 015348 233 LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPR--------KLI-SAIQAMMAVFMISDVLFVKGVYREMGVPDSLY 303 (408)
Q Consensus 233 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
+|+|..+.|+..++..+.+.+..++.|.++||...| |.+ .++....++..+...+ ..-...
T Consensus 289 L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~--------~~~~~~-- 358 (466)
T KOG2532|consen 289 LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAF--------TSDEHR-- 358 (466)
T ss_pred hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeee--------cCCCcc--
Confidence 999999999999999999999999999999987653 111 1111111111111000 011111
Q ss_pred ehhhhHHHHHHHHHhhhhH--HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHH
Q 015348 304 VLIFSSLLEVMFFFKILPF--SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQ 381 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 381 (408)
......+....+..+.... ..-..+. .|++.+.++|+.+....+++.++|.+.|.+.+ -+ + ......++.+.
T Consensus 359 ~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~~-t---~~eW~~VF~i~ 432 (466)
T KOG2532|consen 359 LLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVT-DN-T---REEWRIVFLIA 432 (466)
T ss_pred hHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeC-CC-C---HHHHHHHHHHH
Confidence 1111122222222212222 2222222 45889999999999999999999999998885 11 2 22334555555
Q ss_pred Hhhhhhhhhhhh
Q 015348 382 AVCTILPLYWSY 393 (408)
Q Consensus 382 ~~~~~~~~~~~~ 393 (408)
+.+.+++...+.
T Consensus 433 a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 433 AGILIVGNIIFL 444 (466)
T ss_pred HHHHHHhchhee
Confidence 555554444433
No 94
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.94 E-value=7.5e-24 Score=195.02 Aligned_cols=383 Identities=14% Similarity=0.137 Sum_probs=245.4
Q ss_pred hhhhhhccCCCHHHHHHHHHhhccccc-ccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCc--------
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMV-GKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSS-------- 74 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~-~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~-------- 74 (408)
+.|+ +++|.++.+.+++..+..+... .+|+.|.++||+++|..+||++++.+.....++..++++++...
T Consensus 28 ~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~ 106 (477)
T TIGR01301 28 TPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLD 106 (477)
T ss_pred HHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccccc
Confidence 4455 7899999999999998885544 49999999998877766666666667777777777777765100
Q ss_pred --c---hHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHH--hh
Q 015348 75 --I---SIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFA--ID 147 (408)
Q Consensus 75 --~---~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l--~~ 147 (408)
. ..+.+++...+..++.....++..++++|..|+++| +++.++++.+...++|.++|+.++++. .+
T Consensus 107 ~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~-------~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~ 179 (477)
T TIGR01301 107 KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR-------RTRIANAYFSFFMAIGNVLGYAAGAYSGLYK 179 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0 013445555566778888888888999999998762 357889999999999999999999875 22
Q ss_pred cC-------------ChhhHHHHHHHHHHHHHHHhhh-cccccccCCCC--------CcchhHHHHHHHHHHhccc--ch
Q 015348 148 RF-------------SPPSMFLFFGLLVVLQFFITIA-VRESALKLPKS--------QSNVGIRAQLSELSAALRK--PE 203 (408)
Q Consensus 148 ~~-------------g~~~~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~--------~~~~~~~~~~~~~~~~~~~--~~ 203 (408)
.+ +.|..|.+.++..++..+...+ .||++..++++ .++.+.++.++++++.+|+ |.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~ 259 (477)
T TIGR01301 180 IFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRP 259 (477)
T ss_pred hcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHH
Confidence 21 5788999988888877666554 88865421111 1111122334444444443 66
Q ss_pred hHHHHHHHHhhhcccccccceeEEEEEe-ccCCCh------hhH---H-HHHHHHHHHHHHHHHHHHHhhccCCC-ceeh
Q 015348 204 IMYSVAWFAASYSIIPVLTGTMFFYQTQ-NLKIRS------SVL---G-ISKVFGQAAMLLWGVIYNSGLKSVSP-RKLI 271 (408)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~------~~~---g-~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 271 (408)
++.+++..++.|.....+......|..+ .++-++ ++. | +......+...+.+++..++.+|+|+ |+..
T Consensus 260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~ 339 (477)
T TIGR01301 260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLW 339 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence 7888888888776544443333333222 122211 111 2 33455566666777888999999986 4555
Q ss_pred HHHHHHHHHHHHHhHhhhccccc--c-------cCcCce-EeehhhhHHHHHHHHHhhhhH-HHHHHHhcCC--chhHHH
Q 015348 272 SAIQAMMAVFMISDVLFVKGVYR--E-------MGVPDS-LYVLIFSSLLEVMFFFKILPF-SVYIAQVCPP--GCEGSI 338 (408)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~--~~~g~~ 338 (408)
..+.++.+++.....+.....++ . +..+.. .+.........|+.......+ ++++++..|+ +..|..
T Consensus 340 ~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~ 419 (477)
T TIGR01301 340 GIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLS 419 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcch
Confidence 66666666655544332210000 0 000000 123334445556666666666 8888998885 566999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhhh-hhhhhhccCCCCC
Q 015348 339 MAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCTIL-PLYWSYFMPDGVK 400 (408)
Q Consensus 339 ~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 400 (408)
+|+.|.+..+.+.+.....|.+.+.+|.+. ...+.++++..++ ++...+.+|+.++
T Consensus 420 mgilN~~I~lpQii~sl~~g~~~~~~g~~~------~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 420 MGVLNLAIVIPQIIVSLGSGPWDQLFGGGN------LPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcCCCC------eeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999888887432 1233444444443 3444567787653
No 95
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.93 E-value=7.1e-25 Score=187.36 Aligned_cols=329 Identities=16% Similarity=0.144 Sum_probs=214.5
Q ss_pred CCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 015348 13 VDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGA 91 (408)
Q Consensus 13 ~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 91 (408)
.+..-.|.+.+.+.+..++ +|.||.++|| +|||+++..+++..+++..+.+.+. |+..++..|++.|+..
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-----yGRkpvll~c~~~va~s~ll~~~S~----~F~afv~aR~l~Gi~k 135 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDR-----YGRKPVLLACLIGVALSYLLWALSR----NFAAFVLARFLGGIFK 135 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhh-----hCchHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcc
Confidence 3556778888888876666 9999999999 9999999999999999999999998 9966677799999999
Q ss_pred HHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh---cCChhhHHHH-H---HHHHHH
Q 015348 92 SIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID---RFSPPSMFLF-F---GLLVVL 164 (408)
Q Consensus 92 ~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~---~~g~~~~f~i-~---~~~~~~ 164 (408)
+...+.. +++.|+.++++ |++.++.+....++|.++||.+||++.. ..|- .+|.. + .+....
T Consensus 136 gnl~v~r-AiisdV~sek~---------r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~-~p~alP~~~v~i~a~~ 204 (451)
T KOG2615|consen 136 GNLSVIR-AIISDVVSEKY---------RPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGS-YPFALPCLLVFILAAG 204 (451)
T ss_pred CchHHHH-HHHHhhcChhh---------ccceeeeeehhhhcchhhcchhhhHHHhhHhhhcc-CchHHHHHHHHHHHHH
Confidence 9998887 99999999864 9999999999999999999999999987 2232 12222 1 112112
Q ss_pred -HHHHhhhcccccccCCCCCcchhHH------HH-----HHHHHHhcccchhHH------HH-HHHHhhhccccccccee
Q 015348 165 -QFFITIAVRESALKLPKSQSNVGIR------AQ-----LSELSAALRKPEIMY------SV-AWFAASYSIIPVLTGTM 225 (408)
Q Consensus 165 -~~~~~~~~~e~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~ 225 (408)
.....+++||+-+.+++++++.+.. +. ...-...+||+.... .+ +-.++....+.......
T Consensus 205 ~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~ 284 (451)
T KOG2615|consen 205 DVTFFPWFLPETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTV 284 (451)
T ss_pred HHHHHHHhCCccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 1234556888744333221111010 11 111122345543222 11 11112122222223333
Q ss_pred EEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCC--CceehHHHHHHHHHHHHHhHhhhcccccccCcCceEe
Q 015348 226 FFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVS--PRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLY 303 (408)
Q Consensus 226 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
..+..+.+|+++.+.|-+....++.+.+......+..+|.. .+-.+......+.-..++ .+......
T Consensus 285 ~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~ll-----------ls~~~~~~ 353 (451)
T KOG2615|consen 285 LFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLL-----------LSLARTPV 353 (451)
T ss_pred HHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHH-----------Hhccccch
Confidence 33334568999999998888888877777766666666654 222222222211111111 11111112
Q ss_pred ehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 015348 304 VLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFS 372 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~ 372 (408)
.+........+......+. ..++.+..|+++||++.|+..+.+.++.++||.++|.+..+..-....+.
T Consensus 354 ~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~ 423 (451)
T KOG2615|consen 354 VLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYI 423 (451)
T ss_pred hhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceee
Confidence 3444445555555545555 88899999999999999999999999999999999999887654444443
No 96
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.93 E-value=1.7e-22 Score=177.04 Aligned_cols=373 Identities=17% Similarity=0.118 Sum_probs=273.0
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccccchheeeccccc-ccCCcchhHHHHHHHHHHHHHHHHHHhcc---C-------c
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVY-ISGQHRVPYIAIGAFLQAVSWLAIAILSQ---S-------S 74 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~-~~~~grk~~l~~~~~~~~~~~~~~~~~~~---~-------~ 74 (408)
-+..|++++..-.+...++..+.....+.+|+.||+-| ..|++|.|++..|......+..++.+... + +
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 35679999999999999998877777999999999998 78889999999999888877666554321 1 1
Q ss_pred chHH--HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChh
Q 015348 75 ISIF--TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPP 152 (408)
Q Consensus 75 ~~~~--~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~ 152 (408)
...+ .......+.|+|.+...++..+++.|..++++ |+++.++.+.+.-+|.+++..+.+.+.+.++..
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~---------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~ 155 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER---------RPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPE 155 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh---------hhhhHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 1222 34556788899999999999999999999864 999999999999999999999999999887765
Q ss_pred hHHHHHHHHHHHHHH---HhhhcccccccCCC---CCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeE
Q 015348 153 SMFLFFGLLVVLQFF---ITIAVRESALKLPK---SQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMF 226 (408)
Q Consensus 153 ~~f~i~~~~~~~~~~---~~~~~~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (408)
...-+.....++... +..+-.|++.++.. ++++.+.++.++++ ..+|+..++..+.++.......-....-
T Consensus 156 rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~---~~~~~a~~f~~fl~l~t~a~~~QD~iLE 232 (403)
T PF03209_consen 156 RLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQV---WASPQARRFFVFLFLGTLAFFMQDVILE 232 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHH---HhCCChhHHHHHHHHHHHHHHhhHHHcC
Confidence 554444444333332 22333344333222 22334455555554 6888888888888876666666677788
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhc-cCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeeh
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLK-SVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVL 305 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (408)
||--+.+|++..+...++.....+.+++....+++.. |.++++.-.+++.....+..+... -+...+.+.+
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~--------a~~~~~~~~~ 304 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL--------AGPLGSPWLF 304 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH--------HHhcccchHH
Confidence 8999999999999999999999999999999988876 566666666666665555443222 1222333455
Q ss_pred hhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCCCchHHHHHHHH
Q 015348 306 IFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTG--DDFSGLPLALIIQA 382 (408)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~--~~~~~~~~~~~~~~ 382 (408)
-...+..|++.+.+... .+...+.+++++.|...|.....+.++..++..++|.+.|....-. +....+...+.+-+
T Consensus 305 ~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa 384 (403)
T PF03209_consen 305 RPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEA 384 (403)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 56667777777666555 7788899999999999999999999999999999999998653221 23445566666777
Q ss_pred hhhhhhhhhhhccCCC
Q 015348 383 VCTILPLYWSYFMPDG 398 (408)
Q Consensus 383 ~~~~~~~~~~~~~~~~ 398 (408)
+..+.++.....+.++
T Consensus 385 ~ll~~a~~ll~~l~~~ 400 (403)
T PF03209_consen 385 VLLLAALVLLGRLDRR 400 (403)
T ss_pred HHHHHHHHHHHHhhhh
Confidence 7777766666655443
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=5.5e-23 Score=194.17 Aligned_cols=336 Identities=15% Similarity=0.087 Sum_probs=207.7
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCC-cchhHHHHHHHHHHHHHHHHHHhccCcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQ-HRVPYIAIGAFLQAVSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~-grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (408)
+..|+++++|+|+++.+.+.+... ..+...+++|+++|| + |||+.+..+.++..++..++.+++ .+.+.+
T Consensus 44 l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr-----~~G~r~~~~~g~~~~~ig~~l~~~~~---~~~~~l 115 (500)
T PRK09584 44 MAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDK-----VLGTKRVIMLGAIVLAIGYALVAWSG---HDAGIV 115 (500)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHhc---ccHHHH
Confidence 457888999999999888887765 334446789999999 7 999999999999999988888764 145667
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
.+.+.+.|++.+...+...+++.|+.|+++ + +|++..++.+.+.++|..+||.+++++.++.|||+.|.+.++
T Consensus 116 ~~~~~l~gig~g~~~~~~~~l~~~~f~~~~--~-----~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i 188 (500)
T PRK09584 116 YMGMATIAVGNGLFKANPSSLLSTCYEKDD--P-----RLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVV 188 (500)
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHhcCCCc--h-----hhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 788999999999988888899999998654 2 466678888999999999999999999999999999999876
Q ss_pred HHHHHHHHhh----hcccccccCCCC-CcchhH-H-------------------HH----------------HHHH---H
Q 015348 161 LVVLQFFITI----AVRESALKLPKS-QSNVGI-R-------------------AQ----------------LSEL---S 196 (408)
Q Consensus 161 ~~~~~~~~~~----~~~e~~~~~~~~-~~~~~~-~-------------------~~----------------~~~~---~ 196 (408)
...+..+... .++|++++++++ .+..+. . +. .++. .
T Consensus 189 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (500)
T PRK09584 189 GMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMK 268 (500)
T ss_pred HHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 5555433222 234432111110 000000 0 00 0000 0
Q ss_pred HhcccchhHHHHHHHHhhhcccccccceeEEEEE----ec-----cCCChhhHHHHHHHHHHHHHHH----HHHHHHhhc
Q 015348 197 AALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQT----QN-----LKIRSSVLGISKVFGQAAMLLW----GVIYNSGLK 263 (408)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~g~~~~~~g~~~~~~~~~~~~~----~~~~~~l~~ 263 (408)
+.-++| .+..+..... ...+.......+.+.. +. .|+. ...+++..+..+..++. ...++++.+
T Consensus 269 ~~~~~~-~~~~~~~~~~-~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~n~i~iil~~p~~~~~~~~l~~ 345 (500)
T PRK09584 269 GAARRK-MIVAFILMLE-AIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQALNPFWIMIGSPILAAIYNKMGD 345 (500)
T ss_pred HHHHHH-HHHHHHHHHH-HHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHHhHHHHHHHHHHHHHHHHHhCc
Confidence 011112 2222111111 1111111111111111 11 1211 11334444555444444 444577777
Q ss_pred cCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHH
Q 015348 264 SVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFV 342 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~ 342 (408)
|.+..+.+.++.++.++..+...... ......+. .+.++.+...+..++++....|. .+++.+.+|++.||+++|+.
T Consensus 346 r~~~~~~~~~G~~l~~l~f~~l~~~~-~~~~~~~~-vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~ 423 (500)
T PRK09584 346 RLPMPHKFAIGMVLCSGAFLVLPLGA-KFANDAGI-VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSW 423 (500)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCc-cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHH
Confidence 77766777777777776654432211 11000111 12235667778889999999999 99999999999999999966
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 015348 343 MSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 343 ~~~~~lg~~ig~~~~g~l~~ 362 (408)
..... +|+.++|.+.+
T Consensus 424 ~l~~a----~g~~~~g~~~~ 439 (500)
T PRK09584 424 FLTTA----GAALIAGYVAN 439 (500)
T ss_pred HHHHH----HHHHHHHHHHH
Confidence 55544 44455555544
No 98
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=8.2e-23 Score=177.09 Aligned_cols=331 Identities=15% Similarity=0.098 Sum_probs=251.0
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
+...+++.+++|..|.+++...+..++.+ +.+.|.+.|| +|+|+-+++|..++++++.+..-+. ...++..++
T Consensus 35 Lip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-----~gyk~gi~lgL~l~avg~~lF~pAa-~~~~y~~FL 108 (422)
T COG0738 35 LIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-----LGYKAGIVLGLLLYAVGAALFWPAA-SSKSYGFFL 108 (422)
T ss_pred hHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHhhhh-hhhhHHHHH
Confidence 34578899999999999999999999888 8999999999 9999999999999999998875222 122788888
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------------
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR------------- 148 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~------------- 148 (408)
...++.+.|.+..+++.++++....++++ ..+-++..+...++|.++||.+++.++.+
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~---------a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~ 179 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPES---------AAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILA 179 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchh---------HHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHH
Confidence 99999999999999999999999998854 44446677779999999999999988762
Q ss_pred ------CChhhHHHHHHHHHHHHHHHhhhcc--cccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhccccc
Q 015348 149 ------FSPPSMFLFFGLLVVLQFFITIAVR--ESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPV 220 (408)
Q Consensus 149 ------~g~~~~f~i~~~~~~~~~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (408)
-.++.++...+...++..+.....| |.++..++..+ .++. ...+.+|+|.++...+..++.......
T Consensus 180 ~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~---~~~~--~~~~l~~~~~~~~gvl~~FlYVG~Eva 254 (422)
T COG0738 180 IKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGA---SGSA--GLSSLFQNKHLRLGVLAIFLYVGAEVA 254 (422)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccc---cccc--hHHHHHhChHHHHHHHHHHHHHhHHHH
Confidence 2478888887777666655554433 33322222111 1111 334558999999999999986666677
Q ss_pred ccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCc
Q 015348 221 LTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPD 300 (408)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (408)
..++.+.|..+..|.+..+.....+....+.++|.++..++.+|+...|.+........+.++...+ .+
T Consensus 255 ~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l-----------~~ 323 (422)
T COG0738 255 IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVAL-----------IG 323 (422)
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-----------hc
Confidence 7777777777778999999999999999999999999999999999888887766554444333221 11
Q ss_pred eEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 301 SLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
. .+........+.......|. .+...+..|+ + .+.-|..-.+...|+.+-|.+.|++.|..|..
T Consensus 324 g-~v~~~~l~~ig~F~simfPTIfslal~~l~~-~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~ 388 (422)
T COG0738 324 G-VVALYALFLIGLFNSIMFPTIFSLALKNLGE-H-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQ 388 (422)
T ss_pred C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCc-c-ccccceeeeeheecchHHHHHHHHHHHhhhhH
Confidence 1 13333455566666777787 8888888883 3 33334455667789999999999999998864
No 99
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.91 E-value=5.2e-24 Score=190.07 Aligned_cols=336 Identities=12% Similarity=0.143 Sum_probs=214.8
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHH--HHHHHHH-HHhccCcchHH-
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQ--AVSWLAI-AILSQSSISIF- 78 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~--~~~~~~~-~~~~~~~~~~~- 78 (408)
+.|++++.|+|++|+|.+.++..+..++ +|+.|.++|| .|.||-++...... ..+.... .+.|....|.+
T Consensus 31 ~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-----lg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~l 105 (412)
T PF01306_consen 31 PIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-----LGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWL 105 (412)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-----CTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HH
T ss_pred HHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888999999999999999866655 9999999999 77665544332221 1122221 12221111332
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHH
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFF 158 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~ 158 (408)
..++.-+..++......+..+++.-+..++++- +.|++.. .+++|.+++..++|.+.+ .+.+..||+.
T Consensus 106 g~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~f-------eYG~~R~----wGSig~ai~s~~~G~L~~-i~p~~~fwi~ 173 (412)
T PF01306_consen 106 GAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGF-------EYGRARM----WGSIGFAIASLLAGILFN-INPNIIFWIA 173 (412)
T ss_dssp HHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS--------HHHHHH----HHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHhcC-------CcchHHH----HhhHHHHHHHHHhheeee-eCccHHHHHH
Confidence 223333334555555566677777777665431 3555444 999999999999999987 4778888987
Q ss_pred HHHHHHHHHHhhhcc-cccccCC--CCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEe---c
Q 015348 159 GLLVVLQFFITIAVR-ESALKLP--KSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQ---N 232 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~-e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 232 (408)
....++..++.++.+ +.+++.+ +.++.++.+...++..+.+|+|++|.+.++..........+....+.|... .
T Consensus 174 s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~ 253 (412)
T PF01306_consen 174 SAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQS 253 (412)
T ss_dssp HHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 766665555544443 3222211 111112233345777788999999998887666444444433323333322 2
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHH
Q 015348 233 LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLE 312 (408)
Q Consensus 233 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
.+.+.+..|.+.+...+..++...+.+++.+|+|.|+.+.++..++.+=... .+..++.+.+...-...
T Consensus 254 ~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~-----------~~~~~~~~~i~~~klLH 322 (412)
T PF01306_consen 254 AGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIG-----------SGFATNPWVISLIKLLH 322 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-----------HHT--SHHHHHHHHHHH
T ss_pred cccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHH-----------HhhhcchHHHHHHHHHH
Confidence 3445677899999999999999999999999999999998887776665444 22234444555555555
Q ss_pred HHHHH-hhhhHHHHHHHhcCCchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 313 VMFFF-KILPFSVYIAQVCPPGCEGSIMAFV-MSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 313 ~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
+.... ...+..-++++..|++..++.+.+. +...+++..+.+.++|.+.|+.|.+
T Consensus 323 ~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~ 379 (412)
T PF01306_consen 323 ALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQ 379 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcH
Confidence 55543 3344477999999999999999985 5678899999999999999999864
No 100
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=7.7e-24 Score=195.27 Aligned_cols=241 Identities=12% Similarity=0.047 Sum_probs=202.2
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+++|++....+.+.+.+++.+++++ +++.|.+.|| ++-.+.+....+..++..++..... |++.+++.|+
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r-----~~ls~~l~~~~~~w~~~~~~~~~~~----s~~~~ialr~ 142 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDR-----FPLSKGLSVSGILWGLFGFLTAAVH----SFPGLIALRF 142 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHh-----CChHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHH
Confidence 4578899999999999999999998 9999999999 8877777777777777766666677 9999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh------hcCChhhHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAI------DRFSPPSMFLFFG 159 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~------~~~g~~~~f~i~~ 159 (408)
+.|+..+...|....++..+.++++ |+..+++++...++|+++|.+++..+. ...||||.|++.+
T Consensus 143 llGl~es~~wP~~~~~lg~wy~~~e---------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G 213 (495)
T KOG2533|consen 143 LLGLFESGGWPGVVAILGNWYGKSE---------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG 213 (495)
T ss_pred HHHHHhcccchHHHHHHHhhcChhh---------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH
Confidence 9999999999999999999999874 999999999999999999999998863 3579999999999
Q ss_pred HHHHHHHHHhhh-cccccccCCC--CCc--------------chhHHHHHHHHHHhcccchhHHHHHHHHhhhccccccc
Q 015348 160 LLVVLQFFITIA-VRESALKLPK--SQS--------------NVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLT 222 (408)
Q Consensus 160 ~~~~~~~~~~~~-~~e~~~~~~~--~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (408)
++.++..+..++ +|+.|.+..- +++ ....+...+++++.+++|.+|...+..++.......+.
T Consensus 214 ~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~ 293 (495)
T KOG2533|consen 214 VITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFS 293 (495)
T ss_pred HHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHH
Confidence 998888766554 8877652110 000 00111345677888999999999999998777777788
Q ss_pred ceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 015348 223 GTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSV 265 (408)
Q Consensus 223 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 265 (408)
.+.|.+..+..|++..+...+.+...++++++.++.+.++||.
T Consensus 294 ~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 294 YWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 8888888876779999999999999999999999999999994
No 101
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.91 E-value=1.9e-22 Score=176.00 Aligned_cols=366 Identities=14% Similarity=0.159 Sum_probs=252.8
Q ss_pred hhhhhhccCC---CH----HHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcc
Q 015348 4 NFFLKDSLNV---DP----STLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSI 75 (408)
Q Consensus 4 ~~~l~~~l~~---s~----~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~ 75 (408)
+.|+++..+. ++ +..+...++.. +..++.|+.|.++|+. ..|||.+-....+..++.+++.+.+.. .
T Consensus 39 ply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~----g~Rk~~~~~f~~i~i~~~~~L~~i~~~-s 113 (438)
T COG2270 39 PLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP----GPRKKFFGFFTAIGIISTFLLWFIPPG-S 113 (438)
T ss_pred HHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC----CCcchHHHHHHHHHHHHHHHHHHhCCC-c
Confidence 5566665544 33 34455555555 4455699999999992 456777778888888888888888843 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHH--HHH-h------
Q 015348 76 SIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLV--GFA-I------ 146 (408)
Q Consensus 76 ~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~--~~l-~------ 146 (408)
+++..+....+..++....++..++++.+..++++ .++..+.-+....+|+.+.-+.. +.. .
T Consensus 114 ~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~---------~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~ 184 (438)
T COG2270 114 YLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN---------MGRISGLGWALGYLGSVILLIFVVLGFALGQQTGIT 184 (438)
T ss_pred hHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc---------cCcccccccccccccchHHHHHHHHHHhccccccee
Confidence 67777788899999999999999999999999875 44445544555666666554432 111 1
Q ss_pred ---------hcCChhhHHHHHHHHHHHHHHHhhh-cccccccC-CC-CCcchhHHHHHHHHHHhcccchhHHHHHHHHhh
Q 015348 147 ---------DRFSPPSMFLFFGLLVVLQFFITIA-VRESALKL-PK-SQSNVGIRAQLSELSAALRKPEIMYSVAWFAAS 214 (408)
Q Consensus 147 ---------~~~g~~~~f~i~~~~~~~~~~~~~~-~~e~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (408)
+...-|..+.+.++..++..+..+. +++.++.. ++ +.-.+..|+...++++..+++++..+++..++.
T Consensus 185 ~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~ 264 (438)
T COG2270 185 IILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFY 264 (438)
T ss_pred EEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 2234688888888888887776554 56554332 11 111234455555566667788888887777763
Q ss_pred hcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhccccc
Q 015348 215 YSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYR 294 (408)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (408)
.-...........|...++|++..+..++.....+..++++++.|++.||++.|+++..+.++..+..+.....
T Consensus 265 ~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~------ 338 (438)
T COG2270 265 IDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL------ 338 (438)
T ss_pred HhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc------
Confidence 33333333333345566799999999999999999999999999999999999999988887777665553321
Q ss_pred ccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 015348 295 EMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSG 373 (408)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~ 373 (408)
..+. ......+..+...+..... -++..+.+|+++.++.+|+++..+..+..+||.+.+.+.+..|....
T Consensus 339 --~~~~---~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~---- 409 (438)
T COG2270 339 --EGEL---DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRA---- 409 (438)
T ss_pred --cccH---HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhh----
Confidence 1111 2333344455555444444 88999999999999999999999999999999999999999885332
Q ss_pred hHHHHHHHHhhhhhhhhhhhccCCCCCC
Q 015348 374 LPLALIIQAVCTILPLYWSYFMPDGVKS 401 (408)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (408)
.+....+..++++..+.+.|.++++
T Consensus 410 ---g~~~i~vll~iGl~~L~~v~~~~~~ 434 (438)
T COG2270 410 ---GVLSIIVLLLIGLLLLLRVKVPGRR 434 (438)
T ss_pred ---HHHHHHHHHHhhHhhEEeecCCCCc
Confidence 2233344455566666677665433
No 102
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=1.2e-21 Score=186.52 Aligned_cols=361 Identities=15% Similarity=0.111 Sum_probs=236.0
Q ss_pred HHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH
Q 015348 16 STLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIA 94 (408)
Q Consensus 16 ~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 94 (408)
.+.+++.+...++..+ +++.|.++|+ +|||+.++++.+...++.+++++++ ++++++++|++.|+|.|..
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~-----~GRk~~l~~~~~~~~iG~ii~~~a~----~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDR-----IGRKKTLLLAVVLFLIGAIIIALAP----SWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHhccchhhh
Confidence 4568999998877766 9999999999 9999999999999999999999999 9999999999999999999
Q ss_pred HhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-CChhhHHHHHHHHHHHHHHHhhhcc
Q 015348 95 EVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-FSPPSMFLFFGLLVVLQFFITIAVR 173 (408)
Q Consensus 95 ~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-~g~~~~f~i~~~~~~~~~~~~~~~~ 173 (408)
....+.++.|..|++ .||...+..+....+|..++..++....+. .+||..+.+..+.+++..+..+++|
T Consensus 160 ~~~~piy~sEiap~~---------~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~p 230 (513)
T KOG0254|consen 160 SVLAPVYISEIAPAH---------IRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLP 230 (513)
T ss_pred hhcchhhHhhcCChh---------hhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999886 499999999999999999996555444332 4899999999999888887777799
Q ss_pred cccccCCCCCcc---------------hhHHHH---HH-----H---------HHHhcccchhHHHHHHHHhhhcccc-c
Q 015348 174 ESALKLPKSQSN---------------VGIRAQ---LS-----E---------LSAALRKPEIMYSVAWFAASYSIIP-V 220 (408)
Q Consensus 174 e~~~~~~~~~~~---------------~~~~~~---~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~-~ 220 (408)
|+|+...+..+. .+.... .+ + ..+.++ |..++..+.......++. .
T Consensus 231 esp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~t 309 (513)
T KOG0254|consen 231 ESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLT 309 (513)
T ss_pred CChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHh
Confidence 887642211110 000000 00 0 111122 333333332222122222 2
Q ss_pred ccceeEEEEEec---cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhccccccc-
Q 015348 221 LTGTMFFYQTQN---LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREM- 296 (408)
Q Consensus 221 ~~~~~~~~~~~~---~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 296 (408)
..+...+|..+. .|.+... .....+.++...++..+...+.||+|||+.+..+...+.++.+.............
T Consensus 310 G~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~ 388 (513)
T KOG0254|consen 310 GINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPN 388 (513)
T ss_pred CCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCC
Confidence 223333333322 3444332 44455556666777777789999999999999998888877554322111111000
Q ss_pred -CcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCch
Q 015348 297 -GVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGL 374 (408)
Q Consensus 297 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~ 374 (408)
.....++.+....+........+.|. +.+.+|..|.+.|++..++....+.+.+.+-....-.+.+..+. .
T Consensus 389 ~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~-----~-- 461 (513)
T KOG0254|consen 389 SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGI-----G-- 461 (513)
T ss_pred cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccc-----c--
Confidence 00111112222233333344556677 77889999999999999999999888877666555555555441 0
Q ss_pred HHHHHHHHhhhhhhh-hhhhccCCCCCCcc
Q 015348 375 PLALIIQAVCTILPL-YWSYFMPDGVKSKT 403 (408)
Q Consensus 375 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 403 (408)
.......+++.+... .....+||++.+..
T Consensus 462 ~~f~~f~~~~~~~~~~fv~~~~pETkg~sl 491 (513)
T KOG0254|consen 462 GTFGYFGGICLLSLIIFVFFFVPETKGLTL 491 (513)
T ss_pred chHHHHHHHHHHHHHHHheEEcccCCCCcH
Confidence 122223333333333 45667888876543
No 103
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.1e-22 Score=187.78 Aligned_cols=331 Identities=12% Similarity=0.092 Sum_probs=251.8
Q ss_pred hhhhhccCCCHHHHHHHHHhhcc-cccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANL-PMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~-~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
..++++++.+.++++++.++... .....|+.+.+.|| +|.|++.+.|.++..++.++..+++ ++|++++.
T Consensus 70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~r-----fg~R~v~i~G~~v~~~g~~lssF~~----~i~~l~lt 140 (509)
T KOG2504|consen 70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNR-----FGCRTVMIAGGLVAALGLLLSSFAT----SLWQLYLT 140 (509)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhh-----cCchHHHHHHHHHHHHHHHHHHHHh----hHHHHHHH
Confidence 35678999999999999999984 44459999999999 9999999999999999999999999 99888777
Q ss_pred H-HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 015348 84 L-LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 84 ~-~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
. ++.|+|.++...+....+..++++ +|+.++++...+..+|.++-|.+...+.+.+|||+.+++.+.+.
T Consensus 141 ~gvi~G~G~~~~~~paiviv~~YF~k----------kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~ 210 (509)
T KOG2504|consen 141 FGVIGGLGLGLIYLPAVVILGTYFEK----------KRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS 210 (509)
T ss_pred HHHHhhccchhhhcchhhhhhhHhHH----------HHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 5 899999999999988888888875 49999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhhcccccccC-----------------------------CC-CCc------------chhHH--HHHHHH---
Q 015348 163 VLQFFITIAVRESALKL-----------------------------PK-SQS------------NVGIR--AQLSEL--- 195 (408)
Q Consensus 163 ~~~~~~~~~~~e~~~~~-----------------------------~~-~~~------------~~~~~--~~~~~~--- 195 (408)
+-.......+++...+. .+ ..+ +.+.+ ...+..
T Consensus 211 l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (509)
T KOG2504|consen 211 LNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSML 290 (509)
T ss_pred HHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhh
Confidence 66665555444310000 00 000 00000 001111
Q ss_pred -HHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcee--hH
Q 015348 196 -SAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKL--IS 272 (408)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~ 272 (408)
.+.+++|.++.+.+...+............+.|.. ..+++..+...+.++.++..+++.++.|.+.|+...++. ..
T Consensus 291 d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 291 DLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred hHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 46688888888777776655554444444444444 689999999999999999999999999999999874333 33
Q ss_pred HHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 015348 273 AIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFI 351 (408)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ 351 (408)
.+.+..++..+. ......++.++...+..++..+.+... ...+.++++.++-..++|+...+..++..
T Consensus 370 ~~ll~~gl~~~~-----------~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l 438 (509)
T KOG2504|consen 370 LTLLIAGLARLF-----------LPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGAL 438 (509)
T ss_pred HHHHHHHHHHHH-----------HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHH
Confidence 333333333221 112233345566667777777766666 46888999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q 015348 352 VSGYLGVALASYTGV 366 (408)
Q Consensus 352 ig~~~~g~l~~~~g~ 366 (408)
+||.+.|.+.|..|.
T Consensus 439 ~gpPiag~~~d~tg~ 453 (509)
T KOG2504|consen 439 VGPPIAGLLYDITGN 453 (509)
T ss_pred cCcccceeeeeccCC
Confidence 999999999998884
No 104
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.88 E-value=3.4e-21 Score=164.60 Aligned_cols=322 Identities=14% Similarity=0.091 Sum_probs=248.4
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
-+++|+|+|.++.|++++++.+.+.. +|+..+++.| +|.++.+..+.++.+++..+=... +.+.++..-
T Consensus 37 ~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-----~g~er~l~~~Llli~~G~~iR~~~-----~~~~L~~gt 106 (395)
T COG2807 37 EIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-----FGEERSLFLALLLIAAGILIRSLG-----GLPLLFLGT 106 (395)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-----HhhHHHHHHHHHHHHHHHHHHhcc-----cHHHHHHHH
Confidence 36789999999999999999977665 9999999999 999999999999888888776554 467788889
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC-ChhhHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF-SPPSMFLFFGLLVV 163 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~-g~~~~f~i~~~~~~ 163 (408)
.+.|.+.+..++..++.+-+.+|+ +-+..++.+....++|..+++.+.-.+.++. |||....+-+.+++
T Consensus 107 ~l~G~gIav~nVLLPslIK~~Fpk----------~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~al 176 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDFPK----------RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLAL 176 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhccc----------chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHH
Confidence 999999999999999999998886 4888999999999999999999998888887 79999999999999
Q ss_pred HHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHH
Q 015348 164 LQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGIS 243 (408)
Q Consensus 164 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 243 (408)
+.++.|+.-..+++.+.. +...++-.+++|+|.-|...+++-+.....+....+.|.++.| .|+|+++.|.+
T Consensus 177 lAl~~WlPq~~r~~~~~~-------~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~l 248 (395)
T COG2807 177 LALLIWLPQALREQAASI-------ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSL 248 (395)
T ss_pred HHHHHHhhhccccccccc-------ccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhH
Confidence 888877643211111111 0111112345899999999999888777777777778777665 79999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF- 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (408)
.....+..+..++....+.+|..+++.+......+.....+.+.+ .+... .+...+..|++.+..+|.
T Consensus 249 lsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~---------~P~~~--~~lw~~llG~G~G~~F~la 317 (395)
T COG2807 249 LSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL---------APGQL--PILWALLLGLGQGGAFPLA 317 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH---------hhhhH--HHHHHHHHhCccchHHHHH
Confidence 999999999999999999997765555544443333333332221 11111 111146667777777777
Q ss_pred HHHHHHh-cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 323 SVYIAQV-CPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 323 ~~~~~~~-~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+++... .++++.++..|+.+.++.+=...||.+.|++-|..|.
T Consensus 318 L~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs 362 (395)
T COG2807 318 LTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC
Confidence 6666555 4457778899999999999999999999999999874
No 105
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.87 E-value=7.5e-21 Score=170.79 Aligned_cols=316 Identities=11% Similarity=0.069 Sum_probs=212.3
Q ss_pred hhhhhccCCCHHH-HHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 5 FFLKDSLNVDPST-LQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 5 ~~l~~~l~~s~~~-~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
.++++|+|+|++| .|.+.+....++.+ +++.|.++|| +|.|+++.++.+..++..+++++.+ ++..+.+
T Consensus 50 p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-----lG~K~vL~l~~l~Wsl~t~L~~fa~----Sl~~L~i 120 (511)
T TIGR00806 50 PYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-----LRYKPVLVLQALSFVCVWLLLLLGT----SVWHMQL 120 (511)
T ss_pred HHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 4677899999999 99999999999988 9999999999 9999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHH---H
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFF---G 159 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~---~ 159 (408)
.|++.|++.+... +...++..++|+++ |+++.++.+.+..+|.+++++++++ ...+|||.-..+. .
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kE---------R~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl 189 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSR---------YQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISL 189 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHH
Confidence 9999999999999 88899999999864 9999999999999999999999999 5567998755443 3
Q ss_pred HHHHHHHHHhhhcccccc------cC-----------C--CCCc--c---------hhHHHHHHHHHHhcccchhHHHHH
Q 015348 160 LLVVLQFFITIAVRESAL------KL-----------P--KSQS--N---------VGIRAQLSELSAALRKPEIMYSVA 209 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~~~------~~-----------~--~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~ 209 (408)
....++++..+++|.+++ ++ . +++. . ...+..++++++..+||.++.-.+
T Consensus 190 ~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSl 269 (511)
T TIGR00806 190 VFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSL 269 (511)
T ss_pred HHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhH
Confidence 333444555666763322 00 0 0000 0 001233455666788898887777
Q ss_pred HHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhh
Q 015348 210 WFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFV 289 (408)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (408)
...+..+......++......+.-+-++...|..-++..+.+.+..+..|.+-.++.+.-.+.++.+...-..++ ++
T Consensus 270 Wwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll-~~-- 346 (511)
T TIGR00806 270 WWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLV-FW-- 346 (511)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHh-hh--
Confidence 776644443333321111110000101125566666767777778888888755553322222222111111111 11
Q ss_pred cccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHH
Q 015348 290 KGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALA 349 (408)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg 349 (408)
.+..++.|......+++........++ ..-+++....+.-|-++|+.+.+.-+-
T Consensus 347 ------m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~L 401 (511)
T TIGR00806 347 ------MSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATAL 401 (511)
T ss_pred ------hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHH
Confidence 233345555555555555444444555 666677777788888999876654433
No 106
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=4.2e-20 Score=171.03 Aligned_cols=341 Identities=15% Similarity=0.136 Sum_probs=200.2
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhccc-ccccchheeecccccccCC-cchhHHHHHHHHHHHHHHHHHHhccCcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLP-MVGKPLYGVVSDAVYISGQ-HRVPYIAIGAFLQAVSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~-~~~~~~~G~l~Dr~~~~~~-grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (408)
+..|+++++|+|+.+.+.+.+.+... ++..+++|+++|| + ||||.++++.++..++.+++.... .+...+
T Consensus 32 L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDR-----ilGrrr~iliG~il~~lg~lll~~~~---~~~~~~ 103 (493)
T PRK15462 32 LILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADK-----VLGNRMAVMLGALLMAIGHVVLGASE---IHPSFL 103 (493)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----ccCcHHHHHHHHHHHHHHHHHHHHhh---cchhHH
Confidence 45788889999999999998888855 4448899999999 8 999999999999988887666432 122233
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
.....+..++.+...+...+++.|..|+++ + +|++..++.+...++|..++|.+.+++.+..||++.|.+.++
T Consensus 104 ~l~l~li~iG~G~~~~~~~alv~elfp~~~--~-----~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 104 YLSLAIIVCGYGLFKSNVSCLLGELYEPTD--P-----RRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred HHHHHHHHHhcccccccHHHHHHHHCCCCC--c-----cccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence 444445556777777777799999998764 2 588889999999999999999999999999999999998776
Q ss_pred HHHHHHHHhhhcc----cccc-cCCCCCcchhH----------------------HHHHHH-----------------HH
Q 015348 161 LVVLQFFITIAVR----ESAL-KLPKSQSNVGI----------------------RAQLSE-----------------LS 196 (408)
Q Consensus 161 ~~~~~~~~~~~~~----e~~~-~~~~~~~~~~~----------------------~~~~~~-----------------~~ 196 (408)
..++..+.....+ ++.. ++++.++++.. .+.... ..
T Consensus 177 gm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (493)
T PRK15462 177 GMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYR 256 (493)
T ss_pred HHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555444333222 1110 11111000000 000000 00
Q ss_pred Hhc---ccchhHHHHHHH---HhhhcccccccceeEEEEEec-----cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 015348 197 AAL---RKPEIMYSVAWF---AASYSIIPVLTGTMFFYQTQN-----LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSV 265 (408)
Q Consensus 197 ~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 265 (408)
+.. .+++++...+.. .+.+.......+....|..+. .|++ -..++..+++.+..++.+++..++-.|.
T Consensus 257 ~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l 335 (493)
T PRK15462 257 KAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKES 335 (493)
T ss_pred hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHH
Confidence 001 011222222211 112333333333333332222 2321 1133445555555555554444332222
Q ss_pred -----CCce--ehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHH
Q 015348 266 -----SPRK--LISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGS 337 (408)
Q Consensus 266 -----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~ 337 (408)
.... -+..+.++.++..+...+-...... -+. .+.++++...+...+++....|. .+++++.+|++.+|.
T Consensus 336 ~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~-~~~-~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~ 413 (493)
T PRK15462 336 VAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAM-YGH-SSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGV 413 (493)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCC-cCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHH
Confidence 1111 1445555555554332211111110 111 23335677788889999999999 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015348 338 IMAFVMSAVALAFIVSGYLGVALASYT 364 (408)
Q Consensus 338 ~~g~~~~~~~lg~~ig~~~~g~l~~~~ 364 (408)
.+|+..... ..+|+.++|.+.+..
T Consensus 414 ~mg~w~l~~---~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 414 LTGIYMLLS---GAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHh
Confidence 999984422 244455555554444
No 107
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=5e-19 Score=169.45 Aligned_cols=322 Identities=14% Similarity=0.082 Sum_probs=221.8
Q ss_pred hccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 015348 9 DSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLS 87 (408)
Q Consensus 9 ~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (408)
+....+.....+..+++.++..+ ..++|+++|| +|||++++.+.++..++.+..++++ |++.+++.|++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-----~GRk~~~~~~~~~~~i~~~~~a~a~----~~~~~~~~Rfl~ 181 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-----FGRKPVLLVSLLLFIIFGILTAFAP----NYWMFLIFRFLS 181 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-----cccHHHHHHHHHHHHHHHHHHHHhC----cHHHHHHHHHHH
Confidence 45566778888888888888888 7789999999 9999999999999999999999999 999999999999
Q ss_pred HHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHH
Q 015348 88 NLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFF 167 (408)
Q Consensus 88 g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~ 167 (408)
|++.+........++.|+.++++ |+.+.++ ......+..+++..++++.. +||+.+++..++..+.++
T Consensus 182 G~~~~~~~~~~~~~~~E~~~~~~---------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~ 249 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVSPKQ---------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLL 249 (521)
T ss_pred HhhccchhHHhHhhheeecCcch---------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999864 9999998 77777888888888888877 899999999999888877
Q ss_pred HhhhcccccccCCCCCcc---------------------hhHHHH--H-----------HHHHHhcccchhHHHHHHHHh
Q 015348 168 ITIAVRESALKLPKSQSN---------------------VGIRAQ--L-----------SELSAALRKPEIMYSVAWFAA 213 (408)
Q Consensus 168 ~~~~~~e~~~~~~~~~~~---------------------~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~ 213 (408)
.+++.+|+++....+.+. +..+.. . ......++.|++....+...+
T Consensus 250 ~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 329 (521)
T KOG0255|consen 250 LWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLF 329 (521)
T ss_pred HHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHH
Confidence 766676876532111110 000000 0 012233444544444444433
Q ss_pred hhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccc
Q 015348 214 SYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVY 293 (408)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (408)
.+.......... .+....+|.+. .......+..........+...|+.|||.....+.....+..+...+.....
T Consensus 330 ~~~~~~~~y~gl-~~~~~~lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~- 404 (521)
T KOG0255|consen 330 IWFVFSLVYYGL-SLNVSGLGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL- 404 (521)
T ss_pred HHHHHhHHHHhh-hhhhhhcCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc-
Confidence 232111111111 11111233222 2333333446666667778889999999888888777777665544311111
Q ss_pred cccCcCceEeehhhhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 294 REMGVPDSLYVLIFSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
..+...+...+..+....++........|..|+..|..+.+..+....++..++|.+.-....
T Consensus 405 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 405 ------GGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 101123333344444444555557888999999999999999999999999999987655443
No 108
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.84 E-value=2e-21 Score=187.64 Aligned_cols=262 Identities=15% Similarity=0.055 Sum_probs=202.4
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC-----------
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS----------- 73 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~----------- 73 (408)
-++++++++..+.|++.+.+.+++.+ .++.|++.|| +|||+++.++.++.+++.+++++.+..
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-----~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-----LHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-----cCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 46788999999999999999988877 8999999999 999999999999999999988765300
Q ss_pred ------------------------------------cchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhc
Q 015348 74 ------------------------------------SISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQ 117 (408)
Q Consensus 74 ------------------------------------~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~ 117 (408)
+..+..+++.|+++|+|.+...+...+++.|+.|+++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~------- 205 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKN------- 205 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccc-------
Confidence 0135567889999999999999999999999998864
Q ss_pred cCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC----------------------ChhhHHHHHHHHHHHHHHHhhhcccc
Q 015348 118 SSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF----------------------SPPSMFLFFGLLVVLQFFITIAVRES 175 (408)
Q Consensus 118 ~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~----------------------g~~~~f~i~~~~~~~~~~~~~~~~e~ 175 (408)
|++..++.+....+|..+|+++++++.+.+ +|+..|++.+++.++..+..+++|++
T Consensus 206 --~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 206 --SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred --cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999987643 26777888888777766655556554
Q ss_pred cccCCC----C----C-----cc-------hhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCC
Q 015348 176 ALKLPK----S----Q-----SN-------VGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKI 235 (408)
Q Consensus 176 ~~~~~~----~----~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 235 (408)
.+++.+ + + ++ ...++..+..+++++||.++...+..++..........+.|.|..+.+|+
T Consensus 284 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~ 363 (633)
T TIGR00805 284 LPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGI 363 (633)
T ss_pred cCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 221100 0 0 00 01123345566789999998888877776666666777788888888999
Q ss_pred ChhhHHHHHHHHHH-HHHHHHHHHHHhhccCCC--ceehHHHHHHHHHH
Q 015348 236 RSSVLGISKVFGQA-AMLLWGVIYNSGLKSVSP--RKLISAIQAMMAVF 281 (408)
Q Consensus 236 ~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~ 281 (408)
++.+.+++.....+ +.+++.++.|++.||++. |+.+..+.+...+.
T Consensus 364 s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 364 SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred cHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 99999988877665 668899999999999884 45555555444444
No 109
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.84 E-value=2.3e-19 Score=167.68 Aligned_cols=327 Identities=12% Similarity=0.043 Sum_probs=203.1
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.++..|+|-+ ....|+.+...++... .|+.|.++|. +|||..++.+.++..++.+.++.++ |...++..
T Consensus 68 ~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl-----fGRr~~~i~g~~l~vvG~Iv~atA~----~~~~~iag 137 (599)
T PF06609_consen 68 PYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL-----FGRRYFFIIGSLLGVVGSIVCATAQ----NMNTFIAG 137 (599)
T ss_pred HHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH-----hcchHHHHHHHHHHHhHHHHhhcCC----cHHHHHHH
Confidence 4667788876 4455566666655444 8999999999 9999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
..+.|+|.|...... ..+.|..|.+. |+..........-....+++.++..+..+.+|||.|++..+...
T Consensus 138 ~~l~GvgaG~~~~~~-~~isEl~p~k~---------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~ 207 (599)
T PF06609_consen 138 MVLYGVGAGVQELAA-LAISELVPNKW---------RGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSG 207 (599)
T ss_pred HHHHHHhhHHHHHHH-HHHHHhcccch---------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHH
Confidence 999999988887654 66899998753 66666655544444444667777777667799999999988877
Q ss_pred HHHHHhhh--cccccccCCC--CCcchhHH--------------------------------------------------
Q 015348 164 LQFFITIA--VRESALKLPK--SQSNVGIR-------------------------------------------------- 189 (408)
Q Consensus 164 ~~~~~~~~--~~e~~~~~~~--~~~~~~~~-------------------------------------------------- 189 (408)
+.++..++ .|++++..+. ..+++..+
T Consensus 208 i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F 287 (599)
T PF06609_consen 208 IALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAF 287 (599)
T ss_pred HHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHH
Confidence 76554333 3332211111 10110000
Q ss_pred ---HHH---HH---HHHhcccc-hhHHHHHHHHhhhcccccccceeEEEEEeccCCCh---hhHHHHHHHHHHHHHHHHH
Q 015348 190 ---AQL---SE---LSAALRKP-EIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRS---SVLGISKVFGQAAMLLWGV 256 (408)
Q Consensus 190 ---~~~---~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~g~~~~~~~~~~~~~~~ 256 (408)
|.. ++ -++++|++ .+...++..++..+........+|......++-|+ ...++.......+...+..
T Consensus 288 ~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~ 367 (599)
T PF06609_consen 288 VVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAV 367 (599)
T ss_pred HHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHH
Confidence 000 00 12445553 33333444444333222222223322222233333 3467777778888888888
Q ss_pred HHHHhhccCCCceeh-HHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHh-hhhHHHHHHHhcCCch
Q 015348 257 IYNSGLKSVSPRKLI-SAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFK-ILPFSVYIAQVCPPGC 334 (408)
Q Consensus 257 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~ 334 (408)
+.+.+.++.++-|.. ..+...+.+..-+ ... ....+. -..+...++.+++.+. ..+.....+-.+|++.
T Consensus 368 i~g~l~~~ir~~Kw~li~~~~~~ta~~Ga-ma~-------~~~~n~-~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ 438 (599)
T PF06609_consen 368 ILGLLFSKIRHIKWQLIFGSVLMTAFCGA-MAA-------VRPDNK-NAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED 438 (599)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHH-HHH-------ccCCCc-chHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH
Confidence 888888877655544 3443333322111 110 111111 1223334444444332 2344666667799999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 335 EGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 335 ~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
.|++.|+..+++.+|+.+|..+...+
T Consensus 439 ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 439 IGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999999999999999998776554
No 110
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.84 E-value=2.1e-25 Score=209.99 Aligned_cols=366 Identities=16% Similarity=0.131 Sum_probs=231.2
Q ss_pred HHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 015348 15 PSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASI 93 (408)
Q Consensus 15 ~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 93 (408)
..+.++..+...++..+ .++.|.++|| +|||+.++++.++..++.++..+++.. .+++.+.+.|++.|++.|.
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~-----~GRk~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~R~~~G~~~g~ 118 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADR-----YGRKPALIISALLMIIGSILIAFAPSY-NNFWMLLIGRFLIGFGIGG 118 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccc-----ccccccccccccccccccccccccccc-ccccccccccccccccccc
Confidence 45678888888888877 8999999999 999999999999999999988887632 3789999999999999999
Q ss_pred HHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc---CChhhHHHHHHHHHHHHHHHhh
Q 015348 94 AEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR---FSPPSMFLFFGLLVVLQFFITI 170 (408)
Q Consensus 94 ~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~---~g~~~~f~i~~~~~~~~~~~~~ 170 (408)
..+....++.|..|++. |++..++.+....+|.+++..++....+. .+||..+.+.+++.++..+...
T Consensus 119 ~~~~~~~~~~E~~~~~~---------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~ 189 (451)
T PF00083_consen 119 AYVVSPIYISEIAPPKH---------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRF 189 (451)
T ss_pred ccccccccccccccccc---------cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999998864 89999988888888888887776544333 3499999999888877777777
Q ss_pred hcccccccCCCCCcc-----------------hhHHHH---H-------HHHHHhcccchh-HHHHHHHHhhhc---ccc
Q 015348 171 AVRESALKLPKSQSN-----------------VGIRAQ---L-------SELSAALRKPEI-MYSVAWFAASYS---IIP 219 (408)
Q Consensus 171 ~~~e~~~~~~~~~~~-----------------~~~~~~---~-------~~~~~~~~~~~~-~~~~~~~~~~~~---~~~ 219 (408)
++||+|+....+++. ++.++. . ....+.++++.. +.......+... ...
T Consensus 190 ~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~ 269 (451)
T PF00083_consen 190 FLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGI 269 (451)
T ss_pred ccccccceecccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccc
Confidence 799986532111000 000000 0 012233444331 122222222111 111
Q ss_pred cccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcC
Q 015348 220 VLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVP 299 (408)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (408)
.......+...+..+.+.. -.......+...++.++...+.||+|||+.+..+.....++............... ..
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~ 346 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSS-SW 346 (451)
T ss_pred ccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence 1122222333344555555 12223334555566666678999999999988887776665443210000000000 00
Q ss_pred ceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHH
Q 015348 300 DSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLAL 378 (408)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~ 378 (408)
.....+....+..........|. +.+..|..|.+.|++..|+.....++++.+++.+...+.+..+.. ....
T Consensus 347 ~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~-------~~~~ 419 (451)
T PF00083_consen 347 WSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGW-------GVFL 419 (451)
T ss_pred cccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------ccch
Confidence 01111111122222223334455 678899999999999999999999999999998888877766511 1112
Q ss_pred HHHHhhhhhhhhhhhccCCCCCCcchh
Q 015348 379 IIQAVCTILPLYWSYFMPDGVKSKTTK 405 (408)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (408)
....++.+.....+.++||++++..+|
T Consensus 420 i~~~~~~i~~i~~~~~lpET~g~~l~e 446 (451)
T PF00083_consen 420 IFAGVCLIAIIFVYFFLPETKGKTLEE 446 (451)
T ss_pred hhHHHHHHHHhheeEEEeeCCCCCHHH
Confidence 223333334445667889988776544
No 111
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.83 E-value=1.1e-18 Score=154.63 Aligned_cols=264 Identities=11% Similarity=0.052 Sum_probs=189.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------
Q 015348 76 SIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR------- 148 (408)
Q Consensus 76 ~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~------- 148 (408)
+++.+++..++.|.|.++.++..++++.+..++|+ +.+.+++.+...++|.++||.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~---------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~ 79 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIET---------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSM 79 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch---------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhh
Confidence 89999999999999999999999999999988764 77889999999999999999999988732
Q ss_pred ---------CChhhHHHHHHHHHHHHHHHhhh--cccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcc
Q 015348 149 ---------FSPPSMFLFFGLLVVLQFFITIA--VRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSI 217 (408)
Q Consensus 149 ---------~g~~~~f~i~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (408)
.+|++++++.+.+..+..+.+.+ .||.+++++++..+ ++. .+.++.+++|.++...+..++....
T Consensus 80 ~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~l~~~~~f~yvg~ 155 (310)
T TIGR01272 80 QVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSS---GDT-TQKTSAFQFTHLVLGALGIFVYVGA 155 (310)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccccccc---ccc-cchhhHHhhHHHHHHHHHHHHHHHH
Confidence 36899999776665555444444 45433322211100 110 1112346777777766666664445
Q ss_pred cccccceeEEEEEe--ccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccc
Q 015348 218 IPVLTGTMFFYQTQ--NLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYRE 295 (408)
Q Consensus 218 ~~~~~~~~~~~~~~--~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (408)
.....++.+.|..+ .+|+++.+.+........+.++|.++.+++.||+++|+.+..+..+..+..++...
T Consensus 156 e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-------- 227 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-------- 227 (310)
T ss_pred HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH--------
Confidence 66666777777764 36899999999999999999999999999999999988887766655554432211
Q ss_pred cCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 296 MGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+.. .........+++.....|. .+...+..|+ +.+++.++. ....+|+.+.|.+.|.+.|..|.
T Consensus 228 --~~~~--~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~ 293 (310)
T TIGR01272 228 --THGY--VAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGI 293 (310)
T ss_pred --cCCH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccc
Confidence 0111 1122333456666777777 7777777774 356666764 67789999999999999998875
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2.2e-20 Score=153.61 Aligned_cols=362 Identities=12% Similarity=0.075 Sum_probs=230.2
Q ss_pred chhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHH---HhccCcchH
Q 015348 2 AVNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIA---ILSQSSISI 77 (408)
Q Consensus 2 ~~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~---~~~~~~~~~ 77 (408)
|+-.+.+.|.+++.++..++.++++.|-++ ..++|++.||. +|-|.--++-+....++-+.++ ..+ .+
T Consensus 65 alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~----fgir~gtii~~~fv~~GqliFa~Ggi~~----aF 136 (459)
T KOG4686|consen 65 ALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRR----FGIRLGTIILCIFVFLGQLIFAAGGISH----AF 136 (459)
T ss_pred hhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhh----hhhhHHHHHHHHHHHHHHHHHHhchHHH----HH
Confidence 345677888999999999999999999888 88899999993 5555433333333444444433 344 89
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCh------
Q 015348 78 FTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSP------ 151 (408)
Q Consensus 78 ~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~------ 151 (408)
|.+...|++.|+|.-...++.+.+...+++.++ .+.++++.....-+|+.+--.+.+++++..+-
T Consensus 137 w~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE---------Ln~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~g 207 (459)
T KOG4686|consen 137 WTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE---------LNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVG 207 (459)
T ss_pred HHHHhhheeeccCchhhhhhhcceeEEEecCcc---------ccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccch
Confidence 999999999999988888888899999998764 78888888778888887777777777665221
Q ss_pred hh---H-HHHHHHHHHHHHHHhhh--cccccccCCCCCcchhHH--HHHHHHHHhcccchhHHHHHHHHhhhcccccccc
Q 015348 152 PS---M-FLFFGLLVVLQFFITIA--VRESALKLPKSQSNVGIR--AQLSELSAALRKPEIMYSVAWFAASYSIIPVLTG 223 (408)
Q Consensus 152 ~~---~-f~i~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (408)
+. . ..+....+....+...- ..+++.++.-+.++.... ..+.+. ..+ .|++|.+.+..+..+....-+..
T Consensus 208 hT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv-~~f-~ppfw~~~iicv~yyva~fPFi~ 285 (459)
T KOG4686|consen 208 HTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDV-NTF-YPPFWVLVIICVLYYVAWFPFIT 285 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCcccccc-ccc-CccHHHHHHHHHHHHHHHHHHhh
Confidence 01 1 11111122222222111 222211110000000000 001111 001 36778877777765555445556
Q ss_pred eeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEe
Q 015348 224 TMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLY 303 (408)
Q Consensus 224 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
..+.++++.+|+|+...+-+.+....-+.+.+++.|.++||.|++.....+..+..+..=..+. +..-+.
T Consensus 286 lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~--------Ft~lsP-- 355 (459)
T KOG4686|consen 286 LGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLF--------FTFLSP-- 355 (459)
T ss_pred hhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHH--------hhhccH--
Confidence 6677788899999999998877777778888899999999999877766554444333111111 111111
Q ss_pred ehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHH
Q 015348 304 VLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQA 382 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 382 (408)
...+...|......... +-.+..++|+++.|+++|..++..|+|-.+.|++.|.+.|.-|. +...-..++++.
T Consensus 356 --y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~----y~~le~ffl~~~ 429 (459)
T KOG4686|consen 356 --YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS----YDNLEAFFLIIG 429 (459)
T ss_pred --HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc----hhhHHHHHHHHH
Confidence 12233333333333332 56778889999999999999999999999999999999987653 333445555655
Q ss_pred hhhhhhhhhhhccCCC
Q 015348 383 VCTILPLYWSYFMPDG 398 (408)
Q Consensus 383 ~~~~~~~~~~~~~~~~ 398 (408)
...+......+.+.++
T Consensus 430 ~~aL~svgil~~~N~k 445 (459)
T KOG4686|consen 430 LMALTSVGILFYLNKK 445 (459)
T ss_pred HHHHHHHHHHhheecc
Confidence 5555555555555544
No 113
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.79 E-value=3.2e-18 Score=153.19 Aligned_cols=340 Identities=15% Similarity=0.167 Sum_probs=215.0
Q ss_pred hhhhhhccC----CCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHH
Q 015348 4 NFFLKDSLN----VDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIF 78 (408)
Q Consensus 4 ~~~l~~~l~----~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (408)
.+|+..+++ +|+++..-+.+.+. +.|+...++|+++||+ .|+|+.++.|.++..++.+.++... .....
T Consensus 45 ~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~----LG~~~tI~lGail~~iGh~~L~~~~--~~~~~ 118 (498)
T COG3104 45 ILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRV----LGTRRTIVLGAILMAIGHLVLAISS--VSGPG 118 (498)
T ss_pred HHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHHhccc--ccccc
Confidence 456666666 99988777777776 8888899999999996 7999999999999999999988873 11567
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHH
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFF 158 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~ 158 (408)
.+++...+.++|.|...+...+++.|..|+++ . +|...++.++++.++|+.++|.+.+++.+..||+..|...
T Consensus 119 gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~D--p-----rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~a 191 (498)
T COG3104 119 GLYIGLALIIVGTGLFKPNISSLLGELYPKDD--P-----RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLA 191 (498)
T ss_pred HHHHHHHHHHhccccccccHHHHHHHhcCCCC--c-----ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 78888888889999999999999999999876 2 5888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccc----cccCCCC--Ccch--------------h---H---HHHHH-------------HHHHhc
Q 015348 159 GLLVVLQFFITIAVRES----ALKLPKS--QSNV--------------G---I---RAQLS-------------ELSAAL 199 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~e~----~~~~~~~--~~~~--------------~---~---~~~~~-------------~~~~~~ 199 (408)
++-..+.++.....|.. +..+++. +.+. . . .+.++ ...+.+
T Consensus 192 avGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 271 (498)
T COG3104 192 AVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAF 271 (498)
T ss_pred HHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98888776655543321 1111110 0000 0 0 00000 001111
Q ss_pred cc-------chhHHHH---HHHHhhhcccccccceeEEEEEec-----cCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015348 200 RK-------PEIMYSV---AWFAASYSIIPVLTGTMFFYQTQN-----LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKS 264 (408)
Q Consensus 200 ~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 264 (408)
++ ++.+..+ +...+.|.......+....|..+. +|++ -...+..+...+.-++.+++..++-.|
T Consensus 272 ~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~ 350 (498)
T COG3104 272 RSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTK 350 (498)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhH
Confidence 11 1222222 222222443333333333332222 2221 123455556655555555555444433
Q ss_pred CC-----Cc--eehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhH
Q 015348 265 VS-----PR--KLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEG 336 (408)
Q Consensus 265 ~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g 336 (408)
.+ .+ .-+..+..+++...+............ ....+.++++...+...+++....|. .+++.+.+|+...+
T Consensus 351 l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~-~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s 429 (498)
T COG3104 351 LGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGP-SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKS 429 (498)
T ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHH
Confidence 21 11 123344444444433322210000000 11133446777888899999999999 99999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 015348 337 SIMAFVMSAVALAFIVSGYLGV 358 (408)
Q Consensus 337 ~~~g~~~~~~~lg~~ig~~~~g 358 (408)
..+|..-.....++.++..+++
T Consensus 430 ~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 430 FIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHHHHHHHHHhhceecc
Confidence 8877776666666666555544
No 114
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.79 E-value=1.6e-19 Score=158.63 Aligned_cols=364 Identities=12% Similarity=0.092 Sum_probs=222.0
Q ss_pred CCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC--c-chHHHHHHHHHHHH
Q 015348 13 VDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS--S-ISIFTMSLFLLLSN 88 (408)
Q Consensus 13 ~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~g 88 (408)
.++.-.+.+..+..++.++ |+++|++.|| +|||++.....++..+++++++++... . .-.+++...|++.|
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-----~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LG 155 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDK-----FGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLG 155 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhh-----hcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhh
Confidence 4566677777788888888 9999999999 999999999999999999877765532 1 24688899999999
Q ss_pred HHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh----c-----------CChhh
Q 015348 89 LGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID----R-----------FSPPS 153 (408)
Q Consensus 89 ~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~----~-----------~g~~~ 153 (408)
+|.|.-+|...+..+|.+.++ .||...+.+......|...|.+++-.+.. . .=||.
T Consensus 156 iGIGGDYPlSAtI~SE~an~~---------~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl 226 (538)
T KOG0252|consen 156 IGIGGDYPLSATIMSESANKK---------TRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRI 226 (538)
T ss_pred ccccCCCcchHHHhhhhhhhc---------cccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHH
Confidence 999999999978888877765 37777666666666666666655544432 1 12999
Q ss_pred HHHHHHHHHHHHHHHhhhcccccccCCCCCcc-------------h-------------hHHHHHHHHHHhcccchhHHH
Q 015348 154 MFLFFGLLVVLQFFITIAVRESALKLPKSQSN-------------V-------------GIRAQLSELSAALRKPEIMYS 207 (408)
Q Consensus 154 ~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~-------------~-------------~~~~~~~~~~~~~~~~~~~~~ 207 (408)
.|.+.+++.++....-+.+||+++.+.-.+++ . ..++..+.+.+.+..+.. ..
T Consensus 227 ~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg-~~ 305 (538)
T KOG0252|consen 227 IFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHG-KH 305 (538)
T ss_pred HHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHH-HH
Confidence 99888777777666666689886543100000 0 000001111111111111 12
Q ss_pred HHHHHhhhcccccccceeEEEEEec---cCCChhhH--------HHHHH-HHHHHHHHHHHHHHHhhccCCCceehHHHH
Q 015348 208 VAWFAASYSIIPVLTGTMFFYQTQN---LKIRSSVL--------GISKV-FGQAAMLLWGVIYNSGLKSVSPRKLISAIQ 275 (408)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~--------g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 275 (408)
++.....|+...........+..+. .|+.+... ..... +...+.+.|.++...+.|+.||++....+.
T Consensus 306 Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF 385 (538)
T KOG0252|consen 306 LLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGF 385 (538)
T ss_pred HHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhH
Confidence 2222222333222222122222211 23322221 11222 222334446667777899999999999888
Q ss_pred HHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH---HHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 015348 276 AMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF---SVYIAQVCPPGCEGSIMAFVMSAVALAFIV 352 (408)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~g~~~g~~~~~~~lg~~i 352 (408)
.++.+..+.... .++. .....-..+...+...++. +.|. ..+.+|..|.+.||+..|+....+..|..+
T Consensus 386 ~~~~i~~~~~~~---~y~~---~~~~~Gf~v~y~l~~ff~N--FGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAiv 457 (538)
T KOG0252|consen 386 FIMTIFFFVIAG---PYNQ---LENTIGFVVLYSLTFFFGN--FGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIV 457 (538)
T ss_pred HHHHHHHHHHcC---Cccc---ccccCceeehHHHHHHHHh--cCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHH
Confidence 888776555221 1111 0011111222223333332 2233 456789999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhhhhhhhhhccCCCCCCc
Q 015348 353 SGYLGVALASYTGVTGDDFSGLPLALIIQAVCTILPLYWSYFMPDGVKSK 402 (408)
Q Consensus 353 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (408)
|....+++.++- ..........+.+.+.+.+...+....+||++.++
T Consensus 458 g~~~F~~~t~~~---yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~ 504 (538)
T KOG0252|consen 458 GAFGFLYLTDHN---YPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKS 504 (538)
T ss_pred HHHHhhHhhhcc---CCccccchHHHHHHHHHHHHhHheeEEeecccccC
Confidence 999999988842 11122234445566666777777777888765443
No 115
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=1.4e-17 Score=142.21 Aligned_cols=323 Identities=13% Similarity=0.031 Sum_probs=211.5
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.-+...+|.+..|..++......++.+ +..||..+|+ .|||+-..+......+...+.+.++ |+..+.+.
T Consensus 102 ~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-----~grr~~f~~T~l~t~v~~~is~~sp----nf~~L~~f 172 (528)
T KOG0253|consen 102 PALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-----IGRRKGFNLTFLVTGVFGVISGASP----NFASLCVF 172 (528)
T ss_pred HHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-----hhcchhhhhhHHHHHHHHHhhcCCC----CeehhhHH
Confidence 345567788888999999888888888 8899999999 9999999888888888888888888 99999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVV 163 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~ 163 (408)
|.+.|+|.|. .|...++-.|..|..+ |+...-.. ..+.+|.++...+.-....++||||.....+.+..
T Consensus 173 ~~l~~~g~gg-~pv~~~~yle~lp~~~---------r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~ 241 (528)
T KOG0253|consen 173 RALWGFGVGG-LPVDSAIYLEFLPSSH---------RWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLM 241 (528)
T ss_pred HHHHhccCCC-ccHhHHHHHHhccCcC---------CCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHH
Confidence 9999999998 5555588888888765 55544444 78899999999999888999999999988887776
Q ss_pred HHHHHhhhcccccccCCCCCcc-------------------------------hhH------------HHHHHHHHHhc-
Q 015348 164 LQFFITIAVRESALKLPKSQSN-------------------------------VGI------------RAQLSELSAAL- 199 (408)
Q Consensus 164 ~~~~~~~~~~e~~~~~~~~~~~-------------------------------~~~------------~~~~~~~~~~~- 199 (408)
+.....+.++|+++....+.++ ++. |+.-.+...++
T Consensus 242 ~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLls 321 (528)
T KOG0253|consen 242 FAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLS 321 (528)
T ss_pred HHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcC
Confidence 7777777799986531110000 000 00000011111
Q ss_pred ---ccch--hHHHHHHHHhhhc-----------ccc---cccceeEEEEEeccC--CChhhHHHHHHHHHHHHHHHHHHH
Q 015348 200 ---RKPE--IMYSVAWFAASYS-----------IIP---VLTGTMFFYQTQNLK--IRSSVLGISKVFGQAAMLLWGVIY 258 (408)
Q Consensus 200 ---~~~~--~~~~~~~~~~~~~-----------~~~---~~~~~~~~~~~~~~g--~~~~~~g~~~~~~~~~~~~~~~~~ 258 (408)
++.. .|+......+.+. ... ..+-..+++.....+ .+...-=.-..+..+....|.++.
T Consensus 322 p~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt 401 (528)
T KOG0253|consen 322 PKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLIT 401 (528)
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHH
Confidence 1111 1111111111000 000 000111111111011 111111122345567888999999
Q ss_pred HHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhHHHHHHHhcCCchhHHH
Q 015348 259 NSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPFSVYIAQVCPPGCEGSI 338 (408)
Q Consensus 259 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 338 (408)
+.+.||+|||+.+..+.++.+++.++... . ...+. ..........+..+.+...+.+..|+.|...|++.
T Consensus 402 ~~iverlGRKkTMal~l~~f~iflfll~~---c------~~rn~-~tvllf~arafisg~fqvaYvYtPEVyPTavRatg 471 (528)
T KOG0253|consen 402 GVIVERLGRKKTMALSLILFGIFLFLLTT---C------KTRNA-YTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATG 471 (528)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHH---h------cCcch-hHHHHHHHHHHHhchheEEEEecCcccchhhhhcc
Confidence 99999999999999888888776554321 0 11111 12222222333334444557788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 015348 339 MAFVMSAVALAFIVSGYLG 357 (408)
Q Consensus 339 ~g~~~~~~~lg~~ig~~~~ 357 (408)
.|..+++..+|+.+.|.++
T Consensus 472 vGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 472 VGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hhhhhhHHhhhhhhhhHHH
Confidence 9999999999999999988
No 116
>PTZ00207 hypothetical protein; Provisional
Probab=99.72 E-value=1.6e-15 Score=142.99 Aligned_cols=156 Identities=14% Similarity=0.172 Sum_probs=124.0
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC--cchHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS--SISIFTMS 81 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 81 (408)
+..+++++|+|..|++++.++.......+++.|+++|| +|||+++.++.++..++.++++++... ..+++.+.
T Consensus 50 s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr-----~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~ 124 (591)
T PTZ00207 50 SGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDY-----LGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLS 124 (591)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHH
Confidence 34578999999999999988744333347789999999 999999999999999999999887210 12899999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHH-HHHHHHHHhhcCChhhHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVL-GNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
+.|++.|++.+..++.....+.+++|+ +||++.++.....++|..+ +++..+++. .+|+..|++.++
T Consensus 125 l~r~l~G~G~~~~~~~~~~~i~~~Fp~----------~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~v 192 (591)
T PTZ00207 125 VYNGLMTLGCMLFDLGAVVTVLSVFPS----------NRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMS 192 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChh----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHH
Confidence 999999999999988888889999873 4999999999999999976 454444443 468888888888
Q ss_pred HHHHHHHHhh-hccccc
Q 015348 161 LVVLQFFITI-AVRESA 176 (408)
Q Consensus 161 ~~~~~~~~~~-~~~e~~ 176 (408)
..++..+.+. ++++++
T Consensus 193 l~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 193 FALVVGILAIVFMRLPP 209 (591)
T ss_pred HHHHHHHHHHhheeCCc
Confidence 8777655544 355443
No 117
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.71 E-value=3.2e-15 Score=137.48 Aligned_cols=304 Identities=14% Similarity=0.126 Sum_probs=205.6
Q ss_pred cccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcc
Q 015348 28 PMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAK 107 (408)
Q Consensus 28 ~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~ 107 (408)
+.+..|+.|.++|| +|||..+........+....+.+.. +| +++.--+.|.. +.......++++|...
T Consensus 75 ~~i~s~~iG~lSD~-----~grk~~L~~~~~~~~l~~~~~~~~~-----~~-~~~~~~l~g~~-~~~~s~~~a~vadis~ 142 (463)
T KOG2816|consen 75 TLISSPLIGALSDR-----YGRKVVLLLPLFGTILPALCLLFQG-----YW-FFLLLGLSGGF-SAIFSVGFAYVADISS 142 (463)
T ss_pred HHHHHhhhHHhhhh-----hhhhhhHHHHHHHHHHhHHHHHHHH-----HH-Hhhhcccccch-hhhhhhhhhheeeccc
Confidence 34448999999999 9999999999888877777666643 33 33322222222 2233344578888887
Q ss_pred CCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHhh-hcccccccCCCC----
Q 015348 108 QPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFITI-AVRESALKLPKS---- 182 (408)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~-~~~e~~~~~~~~---- 182 (408)
+++ |....++.+.....+..++|.+++.+....|.-.+|.+..+..++..+... ++||+..++++.
T Consensus 143 ~~~---------R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~ 213 (463)
T KOG2816|consen 143 EEE---------RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATL 213 (463)
T ss_pred hhH---------HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccc
Confidence 764 888899999999999999999999999999999999999998888876654 488875544332
Q ss_pred -----Cc--chhHHHHHHHHHHhcccchhHHHHHHHHhhhcccc-cccceeEEEEEeccCCChhhHHHHHHHHHHHHHHH
Q 015348 183 -----QS--NVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIP-VLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLW 254 (408)
Q Consensus 183 -----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 254 (408)
++ .....+..+...+.-++|..+.+....++...... ......++|....+++++.+.+.+.+.......++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~ 293 (463)
T KOG2816|consen 214 RELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIIS 293 (463)
T ss_pred cccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHH
Confidence 01 11122333333332334444554444444333222 22325577778889999999998877777777777
Q ss_pred HHHHH-HhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCC
Q 015348 255 GVIYN-SGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPP 332 (408)
Q Consensus 255 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~ 332 (408)
..+.. .+.+..+.++....+.......... +++....|..........+. ....|. .+..+...++
T Consensus 294 ~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~-----------~af~~~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~ 361 (463)
T KOG2816|consen 294 QLLLLPLLSSILGEKRLISLGLLSEFLQLLL-----------FAFATETWMMFAAGVVVALA-GIVFPAIRAFASILVSP 361 (463)
T ss_pred HHHHHHHHHHHHhhhhHhhHHHHHHHHHHHH-----------HHHhccchhhhHHHHHHHhh-cchhHHHHhHHHhhccc
Confidence 66655 6677778888666665555444433 22223333444433333333 334455 8899999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015348 333 GCEGSIMAFVMSAVALAFIVSGYLGVALASYT 364 (408)
Q Consensus 333 ~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~ 364 (408)
+++|+++++...+..++..++|.+-+.+...+
T Consensus 362 ~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 362 EEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred ccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999988886554
No 118
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.56 E-value=1.4e-13 Score=121.71 Aligned_cols=342 Identities=11% Similarity=0.006 Sum_probs=218.6
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC--cchHH-
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS--SISIF- 78 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~--~~~~~- 78 (408)
++-|.++.+| |....-+..-++.+.++. ...+-|+.|+ +|-|...+++..+.+++..+-..+..+ .+.++
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-----~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~ 140 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-----FGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRR 140 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-----cchHHHHHHHHHHHHHHHHHhhhccCccccccchh
Confidence 4456666677 555555666666654444 6778899999 999999999999999998876555432 12444
Q ss_pred -HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC------Ch
Q 015348 79 -TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF------SP 151 (408)
Q Consensus 79 -~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~------g~ 151 (408)
.......+.+....+....-.-....|+++++ |..+.+.-.++..+|..+|.++...+..+- .|
T Consensus 141 ~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q---------ra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~ 211 (480)
T KOG2563|consen 141 PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ---------RAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSW 211 (480)
T ss_pred hhhHHhHHHHHHhhhHhhccccHHHHhhCCcch---------hhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHH
Confidence 56677777777777776665455556777754 898888888888899999988888887653 24
Q ss_pred hh--HHHHHHHHHHHHHHHhhh-cccccccCCCCC-cchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEE
Q 015348 152 PS--MFLFFGLLVVLQFFITIA-VRESALKLPKSQ-SNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFF 227 (408)
Q Consensus 152 ~~--~f~i~~~~~~~~~~~~~~-~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (408)
.. .|...+.+..+.+....+ .+|+|+.++... ++....+..+.+++.++|+++....+...+....+....+.+..
T Consensus 212 ~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~ 291 (480)
T KOG2563|consen 212 LFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNL 291 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhh
Confidence 33 344333333333333333 344333222211 11111235567777899999888777665533333333332221
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceeh-HHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLI-SAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
....-|++....|+......+++++++.+.|.+.||.+.-+.. ........+..+.... . .......+++.
T Consensus 292 -~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~---~----t~~~~~~viv~ 363 (480)
T KOG2563|consen 292 -ALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLT---C----TLFLGDSVIVF 363 (480)
T ss_pred -ccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH---h----hccCCceEehh
Confidence 1122466667889999999999999999999999998754433 3332222222111111 0 01112233455
Q ss_pred hhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 307 FSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
......+.+.....|+ .-+..|.+-|..+++-.|+.+..+++-+.+-..+-+...+..+..
T Consensus 364 ~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~ 425 (480)
T KOG2563|consen 364 TTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPP 425 (480)
T ss_pred hhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCC
Confidence 5556666667777888 778888888888999999999998888888888888888776644
No 119
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.53 E-value=2.7e-13 Score=116.65 Aligned_cols=349 Identities=16% Similarity=0.181 Sum_probs=207.5
Q ss_pred chhhhhhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchh-HHHHHHHHHHHHHHHHHHhcc-------C
Q 015348 2 AVNFFLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVP-YIAIGAFLQAVSWLAIAILSQ-------S 73 (408)
Q Consensus 2 ~~~~~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~-~l~~~~~~~~~~~~~~~~~~~-------~ 73 (408)
++++.++ .=|.|.++.+.. +....|+.++.+|.++.|.+++|.+|||| +++-+..+....+.+++...+ .
T Consensus 52 ~iP~lL~-ak~vSyt~~a~f-S~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQ-AKGVSYTSQAIF-SFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhc-CCCcchhhhhhh-hhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence 3556664 567888887754 55667999999999999966665577666 555555555555555444332 1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-----
Q 015348 74 SISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR----- 148 (408)
Q Consensus 74 ~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~----- 148 (408)
..+...+....++..+..+..+.+.+.+...+.++++ .|-+.. +.++|.-.|..++..+.-.
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~---------lgyaST----~q~Vg~~~GyfL~~~ifLaL~s~d 196 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN---------LGYAST----CQSVGQTAGYFLGNVVFLALESPD 196 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh---------cCchhH----HHHHHHhhhHHhhcceeeEecChh
Confidence 2234444456788899999999999999999988775 676666 5556666666555433211
Q ss_pred ------CChh---------hHHHHHHHHHHHHHHHhhhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHh
Q 015348 149 ------FSPP---------SMFLFFGLLVVLQFFITIAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAA 213 (408)
Q Consensus 149 ------~g~~---------~~f~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (408)
.+|. .-.++.+.+.++...+..+.+++++++..++.+.+.++..|-++++++-|.+.....+...
T Consensus 197 F~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt 276 (510)
T KOG3574|consen 197 FCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLT 276 (510)
T ss_pred hhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence 1221 2234455555555555445444443332223334567777888888999988877766655
Q ss_pred hhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcee----hHHHHHHHHHHHHHhHhhh
Q 015348 214 SYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKL----ISAIQAMMAVFMISDVLFV 289 (408)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 289 (408)
.-..+ ...........-+.|++.++.++.........++.....|++..+..+-.. +..-.........+ .+..
T Consensus 277 ~K~gf-~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~L-v~~~ 354 (510)
T KOG3574|consen 277 GKLGF-QAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTAL-VWWT 354 (510)
T ss_pred HHHHh-hhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHH-Hhhh
Confidence 33333 333333334444579999998887766666677777777766542211111 11111111111111 1111
Q ss_pred ccccccc-CcCceEeehhh--hHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 290 KGVYREM-GVPDSLYVLIF--SSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 290 ~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
......- .++.....+.+ ..+..++....+...++..+++.||...|+.+.+.|+..|+|+.--..+..++.|.+++
T Consensus 355 ~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv 434 (510)
T KOG3574|consen 355 PTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTV 434 (510)
T ss_pred cccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCce
Confidence 1111100 11111111111 12222333344445588899999999999999999999999999888999999998775
Q ss_pred C
Q 015348 367 T 367 (408)
Q Consensus 367 ~ 367 (408)
.
T Consensus 435 ~ 435 (510)
T KOG3574|consen 435 K 435 (510)
T ss_pred e
Confidence 3
No 120
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.51 E-value=4.5e-13 Score=121.80 Aligned_cols=341 Identities=12% Similarity=0.082 Sum_probs=192.5
Q ss_pred ccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcc-hhHHHHHHHHHHHHHHHH-HHhccCcchHHHHHHHHHH
Q 015348 10 SLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHR-VPYIAIGAFLQAVSWLAI-AILSQSSISIFTMSLFLLL 86 (408)
Q Consensus 10 ~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~gr-k~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 86 (408)
|.+.+.+..|++.+...++..+ +|..|.+..| .++ |+-++.+.++..++.++. .+....+...+.++++|++
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k-----~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l 139 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNK-----TGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARIL 139 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccc-----cCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 6888999999999999987776 9999999999 553 566778888888888877 3333333478899999999
Q ss_pred HHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--CC-----------hhh
Q 015348 87 SNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR--FS-----------PPS 153 (408)
Q Consensus 87 ~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~--~g-----------~~~ 153 (408)
.|+|.+...... +++++....++ |.|+++....+..+|.++||.++..+... -| +..
T Consensus 140 ~Gvg~~n~a~lR-~Y~a~~s~~~d---------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTa 209 (488)
T KOG2325|consen 140 TGVGVGNFAVLR-AYIADASTVED---------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTA 209 (488)
T ss_pred cCcCcccHHHHH-HHHHhccCccc---------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecch
Confidence 999988877666 88888766654 88888888888888888888877665431 11 345
Q ss_pred HHHHHHHHHHHHHHHh-hhcccccccCCCCCcchhHHHHHHHHHHhcccc--hhHH--HHHHHH-hhhcccccccceeEE
Q 015348 154 MFLFFGLLVVLQFFIT-IAVRESALKLPKSQSNVGIRAQLSELSAALRKP--EIMY--SVAWFA-ASYSIIPVLTGTMFF 227 (408)
Q Consensus 154 ~f~i~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~-~~~~~~~~~~~~~~~ 227 (408)
+-|+.++..++..+.. ++++|.+++..+++.+++ ++..++ .+..+++ .... .+++.. ..........+..+.
T Consensus 210 p~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~ 287 (488)
T KOG2325|consen 210 PAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV-EEEKSD-IEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSA 287 (488)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccCccccccccc-hhhccc-hhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 6677777777765544 447887654433211111 000000 0112222 1111 111111 111222222233333
Q ss_pred EEEeccCCChhh----HHHHHHHHHHHHHHHHHHHHHhh-ccCCCceehHHHHHHHHHHH-HHhHhhhccc-ccc-cC--
Q 015348 228 YQTQNLKIRSSV----LGISKVFGQAAMLLWGVIYNSGL-KSVSPRKLISAIQAMMAVFM-ISDVLFVKGV-YRE-MG-- 297 (408)
Q Consensus 228 ~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~-- 297 (408)
+....++++.++ .|...++.++..+.-........ .++.+|+.+..+.+...... +......... +.. ..
T Consensus 288 ~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~ 367 (488)
T KOG2325|consen 288 LTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTT 367 (488)
T ss_pred HHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeecccccccccccccc
Confidence 333334443333 33334433333333333333322 33344555544433322221 1111100000 000 00
Q ss_pred -----cCce----------Ee-ehhhhHHHHHHHH-HhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 298 -----VPDS----------LY-VLIFSSLLEVMFF-FKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 298 -----~~~~----------~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
.... .+ .++...+..|.+. ....+..++.+|+..|..++++.|+++.....+..++|.+...+
T Consensus 368 ~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~ 447 (488)
T KOG2325|consen 368 YAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAI 447 (488)
T ss_pred ccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhh
Confidence 0000 00 0111111122221 11223578889999999999999999999999999999999988
Q ss_pred HHhcCCC
Q 015348 361 ASYTGVT 367 (408)
Q Consensus 361 ~~~~g~~ 367 (408)
....|.+
T Consensus 448 ~~~~g~~ 454 (488)
T KOG2325|consen 448 FTLSGPR 454 (488)
T ss_pred HHhcCcc
Confidence 8888865
No 121
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.50 E-value=1.7e-11 Score=106.67 Aligned_cols=254 Identities=15% Similarity=0.084 Sum_probs=161.8
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
+-+++|++..|++.+.........+ .++.|.++|| +|||+.-+..+++..++++.. ..+ +++.+++.|+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-----~Grk~~cl~~cily~~scl~k-~~~----~~~~L~~GRv 129 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-----YGRKKACLLFCILYSLSCLTK-HSS----NYPVLLLGRV 129 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHHH-hcc----ccHHHHHHHH
Confidence 3468999999999999988865554 9999999999 999999999888888888643 345 8999999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHH-HHHHHHHHHHHHHHHHHhhcCC--hhhHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVW-MSSSMGGVLGNLLVGFAIDRFS--PPSMFLFFGLLV 162 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~ig~~l~~~l~~~~g--~~~~f~i~~~~~ 162 (408)
+.|++.+.......+++.....++..++ +..+...+... ...++-.+.+.+++.++.+..+ ...+|.....+.
T Consensus 130 lgGiaTSLLfS~FEsW~V~Eh~~~g~~~----~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l 205 (354)
T PF05631_consen 130 LGGIATSLLFSAFESWMVHEHNKRGFPQ----EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLL 205 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCh----HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 9999999999999888766544322111 12333333222 2223334445556666666554 478888887777
Q ss_pred HHHHHHhhh-cccccccCCCCCcchhHHHHHH-HHHHhcccchhHHHHHHHHhhhccccc-ccceeEEEEEeccCCChhh
Q 015348 163 VLQFFITIA-VRESALKLPKSQSNVGIRAQLS-ELSAALRKPEIMYSVAWFAASYSIIPV-LTGTMFFYQTQNLKIRSSV 239 (408)
Q Consensus 163 ~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~ 239 (408)
.+..+.... .+|...+..++ .+.++..+ ..+.+.+||+++.+.+...+.-..... ...|.|....+ -+..-
T Consensus 206 ~~~~~~I~~~W~ENyg~~~~~---~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~---~~~~P 279 (354)
T PF05631_consen 206 AVAAVLILKTWPENYGDTSSS---SSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD---DEELP 279 (354)
T ss_pred HHHHHHHHhcccccCCCcccc---cchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC---CCCCC
Confidence 776655544 56654432221 11222222 233446789988887777663333222 23333433211 12334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-cCCCceehHHHHHHHHH
Q 015348 240 LGISKVFGQAAMLLWGVIYNSGLK-SVSPRKLISAIQAMMAV 280 (408)
Q Consensus 240 ~g~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~ 280 (408)
.|++.....++.++|+.+..++.. +......+.....+.++
T Consensus 280 ~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~ 321 (354)
T PF05631_consen 280 LGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAV 321 (354)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 789999999999999999876654 43333334333333333
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.47 E-value=4e-13 Score=104.81 Aligned_cols=125 Identities=26% Similarity=0.395 Sum_probs=110.2
Q ss_pred cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCc
Q 015348 32 KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMT 111 (408)
Q Consensus 32 ~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~ 111 (408)
.++.|+++|| +|||+.+..+.....++.+.+...+ +.+.....+++.|++.+...+..++++.|..|+++
T Consensus 15 ~~~~g~~~d~-----~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 84 (141)
T TIGR00880 15 SPLSGLLTDR-----FGRKPVLLVGLFIFVLSTAMFALSS----NITVLIIARFLQGFGAAFALVAGAALIADIYPPEE- 84 (141)
T ss_pred HhhHHHHHhh-----cchhHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh-
Confidence 7899999999 9999999999888888888888777 88899999999999999999999999999998764
Q ss_pred cchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHhhh-ccc
Q 015348 112 SSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFITIA-VRE 174 (408)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~-~~e 174 (408)
|++.++..+....+|..+++.+++.+.+..+|++.+++.+...++..+...+ .||
T Consensus 85 --------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 --------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred --------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999999999999988877776655544 443
No 123
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=99.45 E-value=1.8e-11 Score=109.90 Aligned_cols=353 Identities=14% Similarity=0.135 Sum_probs=201.9
Q ss_pred chhhhhhh-ccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchh-HHHHHHHHHHHHHHHHHHhcc-------
Q 015348 2 AVNFFLKD-SLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVP-YIAIGAFLQAVSWLAIAILSQ------- 72 (408)
Q Consensus 2 ~~~~~l~~-~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~-~l~~~~~~~~~~~~~~~~~~~------- 72 (408)
++++.+++ .-+.|.+|.|. .++...|+.++++|.++.|-++++++|||| +++-...+.++.++.++....
T Consensus 22 siPflL~~~~~~~sy~q~~~-fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~ 100 (544)
T PF13000_consen 22 SIPFLLQSMAKKVSYSQQAI-FSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDG 100 (544)
T ss_pred cchhhhccccCCCChhHhee-eeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhcccc
Confidence 45666654 24788888884 466678999999999999999888887776 555555555555555543320
Q ss_pred --------Cc-----chHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHH
Q 015348 73 --------SS-----ISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGN 139 (408)
Q Consensus 73 --------~~-----~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 139 (408)
.. .+...+....++.-+-.+..+.+.+.+.-.+..+++ ++.+......+.++|..++.
T Consensus 101 ~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n---------~~~ASTcqtvG~~~Gyfls~ 171 (544)
T PF13000_consen 101 VDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPEN---------VGYASTCQTVGQTAGYFLSF 171 (544)
T ss_pred cchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhh---------cchHHHHHHhHhhhhHHHHH
Confidence 00 112234455556777788999999999988887764 77777744444444444443
Q ss_pred HHHHHHhh-----c--------CC---hhhHHHHHHHHHHHHHHHh-hhcccccccCC----C----------------C
Q 015348 140 LLVGFAID-----R--------FS---PPSMFLFFGLLVVLQFFIT-IAVRESALKLP----K----------------S 182 (408)
Q Consensus 140 ~l~~~l~~-----~--------~g---~~~~f~i~~~~~~~~~~~~-~~~~e~~~~~~----~----------------~ 182 (408)
.+--.+-+ + .| -..-..+.+...++..... ++-+|++..+. + +
T Consensus 172 tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (544)
T PF13000_consen 172 TVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYD 251 (544)
T ss_pred HHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceecc
Confidence 32211111 0 01 1122233344444444443 34455432110 0 0
Q ss_pred Cc-------chhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHH
Q 015348 183 QS-------NVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWG 255 (408)
Q Consensus 183 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 255 (408)
++ ..+.++..+.+++++|.|++..+.+..+..-..+.. .......-.-+.|++.+..++...+..-..++..
T Consensus 252 ~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a-~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~ 330 (544)
T PF13000_consen 252 ESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQA-NDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILP 330 (544)
T ss_pred cccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhcccc-chhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHH
Confidence 00 013455667788899999988888776663333332 2222222333479999999988888777788888
Q ss_pred HHHHHhhccCCCc---------------------------eehHHHHHHHHHHHHHhHhhhcccccccCcCceEeeh-hh
Q 015348 256 VIYNSGLKSVSPR---------------------------KLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVL-IF 307 (408)
Q Consensus 256 ~~~~~l~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 307 (408)
+..+|+.....+. +....+...-.+..++....+...+..-..+..++.+ +.
T Consensus 331 ~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~ 410 (544)
T PF13000_consen 331 YYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVII 410 (544)
T ss_pred HHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHH
Confidence 8888876533310 0111111111111111111111111101112222111 11
Q ss_pred h-HHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 308 S-SLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 308 ~-~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
. .+........+....++-+++.+|..-|+++.+.|++.|+|+--...+.=++.|.+-
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 2 222233344455568899999999999999999999999999888888888888764
No 124
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.44 E-value=2.4e-12 Score=118.94 Aligned_cols=153 Identities=11% Similarity=0.183 Sum_probs=122.6
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.|+++++|.++.+.+.+.+......+. .+++|+++|| ++||+.+..+.+...+....+...+ +.+..+
T Consensus 239 ~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-----~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l 309 (393)
T PRK15011 239 MPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-----LGKRFLMRVAAVAGVCFYAGMLMAH----SPAILL 309 (393)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHHHHHHh----hHHHHH
Confidence 45678889999999999988776654444 7899999999 9999988777666555554444455 677777
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
+.+++.+++.+...+....+..|..|+ +++++++..+...++|..+||.++|.+.+.+||+..|.+.++.
T Consensus 310 ~~~~l~~~~~g~~~~~~~~~~~~~~p~----------~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~ 379 (393)
T PRK15011 310 GLQLLNAIYIGILGGIGMLYFQDLMPG----------QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVM 379 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC----------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 888888888877776666777787763 3888999988889999999999999999999999999998888
Q ss_pred HHHHHHHhhhccc
Q 015348 162 VVLQFFITIAVRE 174 (408)
Q Consensus 162 ~~~~~~~~~~~~e 174 (408)
.++..+..++.||
T Consensus 380 ~~~~~~~~~~~~~ 392 (393)
T PRK15011 380 IIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHhhcC
Confidence 8877777766765
No 125
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.44 E-value=6.7e-11 Score=107.74 Aligned_cols=337 Identities=18% Similarity=0.129 Sum_probs=187.2
Q ss_pred chhhhhhhccCCCHHHHHHHHHhhccc-ccccchheeecccccccCCcchhHHHHHHHHHHHH----HHHHH--HhccCc
Q 015348 2 AVNFFLKDSLNVDPSTLQLLQNSANLP-MVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVS----WLAIA--ILSQSS 74 (408)
Q Consensus 2 ~~~~~l~~~l~~s~~~~g~~~~~~~~~-~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~----~~~~~--~~~~~~ 74 (408)
+++.++.+-+.-|-.-.+...-...+. .+++|..|.+.|| ..|++.+..+.+..-++ +.+.. +.....
T Consensus 24 a~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~-----~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~ 98 (432)
T PF06963_consen 24 AVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDR-----SPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSS 98 (432)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhC-----CcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 456666554433333233222222333 3458999999999 88988876664443222 22211 111111
Q ss_pred c--hHHHHHHHHHHHHHHHHHHHhhHH----H----HHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 015348 75 I--SIFTMSLFLLLSNLGASIAEVAND----A----LVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGF 144 (408)
Q Consensus 75 ~--~~~~~~~~~~l~g~~~~~~~~~~~----a----~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~ 144 (408)
. +.+.......+.-+..+....... + ++..+.++++ . .+.+.++.+.-.=....+++|++.|.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~--~-----~La~~NA~mRRIDL~ckllaPl~vG~ 171 (432)
T PF06963_consen 99 SSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDP--G-----ALARMNATMRRIDLFCKLLAPLFVGL 171 (432)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCCh--h-----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 112222222222222222222111 1 2222232222 2 58888998888889999999999999
Q ss_pred HhhcCChhhHHHHHHHHHHHHHHHhhh--------ccc---ccccCCCCCc--c-------------hhHHHHH----HH
Q 015348 145 AIDRFSPPSMFLFFGLLVVLQFFITIA--------VRE---SALKLPKSQS--N-------------VGIRAQL----SE 194 (408)
Q Consensus 145 l~~~~g~~~~f~i~~~~~~~~~~~~~~--------~~e---~~~~~~~~~~--~-------------~~~~~~~----~~ 194 (408)
+.+..+.+....+.+...+++...-++ .|+ ++++++++++ + ++.++.. +.
T Consensus 172 l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (432)
T PF06963_consen 172 LMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRG 251 (432)
T ss_pred HhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhcc
Confidence 999899998888888877777543211 121 1111110000 0 0111112 22
Q ss_pred HHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHH
Q 015348 195 LSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAI 274 (408)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 274 (408)
++..+++|.+...+...++ ++..-.+...+..|... .|+++...|.+-....+.++.+.+...++.+|+|..+.-.++
T Consensus 252 w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~ 329 (432)
T PF06963_consen 252 WRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWS 329 (432)
T ss_pred HHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHH
Confidence 3445666765555544444 43333333333334443 499999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHhHhhhcccccccCcCceEeehhh---hHHHHHHHHHhhh-hHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 015348 275 QAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF---SSLLEVMFFFKIL-PFSVYIAQVCPPGCEGSIMAFVMSAVALAF 350 (408)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~ 350 (408)
......+..+........ +.+........ .....=+|--.+- ....+++|.+|+++||+..|.-++..++-.
T Consensus 330 l~~q~~~L~~~v~~~~~~----~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ 405 (432)
T PF06963_consen 330 LWWQWVCLALCVVSFWAP----GSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFE 405 (432)
T ss_pred HHHHHHHHHHHHHHHhcC----CCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHH
Confidence 776666544333211111 11101111111 1111112222222 336788999999999999999999999887
Q ss_pred HHHHHH
Q 015348 351 IVSGYL 356 (408)
Q Consensus 351 ~ig~~~ 356 (408)
.+.-.+
T Consensus 406 ll~~~~ 411 (432)
T PF06963_consen 406 LLSFVL 411 (432)
T ss_pred HHHHHH
Confidence 765444
No 126
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.43 E-value=9.1e-15 Score=137.98 Aligned_cols=344 Identities=17% Similarity=0.155 Sum_probs=2.9
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC-----------
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS----------- 73 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~----------- 73 (408)
-++++++++.++.|++.+.+-++..+ .++..++.+| .+|-|++-.|.++.+++.+++++.+..
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-----~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-----GHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 36789999999999999999987776 8889999999 888889999999999998887754320
Q ss_pred -----------------------------------cchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhcc
Q 015348 74 -----------------------------------SISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQS 118 (408)
Q Consensus 74 -----------------------------------~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~ 118 (408)
...++.++++.++.|+|.+..++...+++=|.+++++
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~-------- 174 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN-------- 174 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc--------
Confidence 0124667788899999999999999999999888764
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhc---------------------CC-hhhHHHHHHHHHHHHHHHhhhccccc
Q 015348 119 SSGELQSFVWMSSSMGGVLGNLLVGFAIDR---------------------FS-PPSMFLFFGLLVVLQFFITIAVRESA 176 (408)
Q Consensus 119 ~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~---------------------~g-~~~~f~i~~~~~~~~~~~~~~~~e~~ 176 (408)
-+...++.+....+|.++|.++++...+. .| |..-|++.+...++..+..++.|++-
T Consensus 175 -splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 175 -SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 67778888889999999998888877642 12 55556666666666655555554331
Q ss_pred ccC----------CCCC-----c---c--------hhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEE
Q 015348 177 LKL----------PKSQ-----S---N--------VGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQT 230 (408)
Q Consensus 177 ~~~----------~~~~-----~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (408)
+.. ++++ + + +..++..+.++++++||.+....+...........+.+..|-|..
T Consensus 254 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE 333 (539)
T PF03137_consen 254 PGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLE 333 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 0000 0 0 112334456677889998887777777766667777788888888
Q ss_pred eccCCChhhHHHHHHHH-HHHHHHHHHHHHHhhccCC--CceehHHHHHHHHHHHHH--hHhhhcc-------ccccc--
Q 015348 231 QNLKIRSSVLGISKVFG-QAAMLLWGVIYNSGLKSVS--PRKLISAIQAMMAVFMIS--DVLFVKG-------VYREM-- 296 (408)
Q Consensus 231 ~~~g~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~-------~~~~~-- 296 (408)
.+++.++....++.... ..+.++|.++.|.+.+|++ .|+......+...+..+. ..++... .+..+
T Consensus 334 ~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~ 413 (539)
T PF03137_consen 334 SQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHN 413 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCcccc
Confidence 88999998888775443 4467788888889888875 344444443333332221 1111100 00000
Q ss_pred ---------------------------C---cC--ceE-eehhhhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHH
Q 015348 297 ---------------------------G---VP--DSL-YVLIFSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVM 343 (408)
Q Consensus 297 ---------------------------~---~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 343 (408)
+ .. ... ..++...+...+......|......+.+|+++|+.+.|+..
T Consensus 414 ~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~ 493 (539)
T PF03137_consen 414 STSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQW 493 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHH
Confidence 0 00 001 11112222233344556677777789999999999999988
Q ss_pred HHHH-HHHHHHHHHHHHHHHh
Q 015348 344 SAVA-LAFIVSGYLGVALASY 363 (408)
Q Consensus 344 ~~~~-lg~~ig~~~~g~l~~~ 363 (408)
.+.+ +|..-||++.|.+.|.
T Consensus 494 ~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 494 LIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------
T ss_pred HHHHhhcCcchHHHHhHHHhh
Confidence 7765 6778899999999885
No 127
>PRK10054 putative transporter; Provisional
Probab=99.42 E-value=9.8e-13 Score=121.42 Aligned_cols=153 Identities=9% Similarity=0.070 Sum_probs=109.5
Q ss_pred chhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHH
Q 015348 202 PEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVF 281 (408)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 281 (408)
|+++.+.+..++............+.|..+++|++..+.|+..+...++.++..++.|++.||+|+|+.+..+.....+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~ 86 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG 86 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Confidence 34455555555544444445555666777789999999999999999999999999999999999999888777666554
Q ss_pred HHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 282 MISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
.+...+ .++.+.........+.......|. .++..|..|+++|++.+|+.+...++|..++|.+++.+
T Consensus 87 ~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 87 FIAIPL-----------VNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHH-----------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433211 111112222222333333444555 78889999999999999999999999999999999988
Q ss_pred HHhcCC
Q 015348 361 ASYTGV 366 (408)
Q Consensus 361 ~~~~g~ 366 (408)
.+ .|.
T Consensus 156 ~~-~g~ 160 (395)
T PRK10054 156 VM-QSI 160 (395)
T ss_pred HH-hcc
Confidence 75 443
No 128
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=7.9e-12 Score=114.85 Aligned_cols=153 Identities=12% Similarity=0.213 Sum_probs=124.2
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.|+++++|.++.+.+.+.+........ .++.|+++|| ++||+.+..+.+...+........+ +.+..+
T Consensus 222 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-----~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 292 (375)
T TIGR00899 222 MPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-----FGKRRLMLLAALAGVAFYTGLAADN----SLWALL 292 (375)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hcchhHHHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence 35677788999999999887766543333 7889999999 9999998888776666655555555 777778
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
..+++.|++.+...+...++..|..|+ ++++.++..+...++|..++|.++|.+.+..||+..|++.++.
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~ 362 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPG----------RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVM 362 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcc----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 888999999888888777888887764 2668899999999999999999999999999999999999888
Q ss_pred HHHHHHHhhhccc
Q 015348 162 VVLQFFITIAVRE 174 (408)
Q Consensus 162 ~~~~~~~~~~~~e 174 (408)
.++..+...++||
T Consensus 363 ~~~~~~~~~~~~~ 375 (375)
T TIGR00899 363 LIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHheecC
Confidence 8887776666654
No 129
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.38 E-value=1.7e-12 Score=117.05 Aligned_cols=168 Identities=11% Similarity=0.152 Sum_probs=121.0
Q ss_pred HHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCce
Q 015348 190 AQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRK 269 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 269 (408)
..+.+..+++.++....++....+.........+ +.+|..++.+-.+...|...+..-.+.++.-++.+++.+|+|+.+
T Consensus 359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~t-FLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~ 437 (618)
T KOG3762|consen 359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFT-FLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN 437 (618)
T ss_pred HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHH-HHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc
Confidence 3445555667887766555444442332222222 235566667777778888888888999999999999999999999
Q ss_pred ehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH-hhhhHHHHHHHhcCCchhHHHHHHHHHHH-H
Q 015348 270 LISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF-KILPFSVYIAQVCPPGCEGSIMAFVMSAV-A 347 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~ 347 (408)
++..+......-.+. +..-.++|.+...-++.++... .+..+.++++..+||+.+.++.|+..... .
T Consensus 438 v~~lgLa~~~~Rf~~-----------~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~G 506 (618)
T KOG3762|consen 438 VMYLGLACNVGRFLY-----------YSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHG 506 (618)
T ss_pred eeeehhhHHHHHHHH-----------HHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcc
Confidence 988777666554443 2222555666667777777754 44455889999999999999999988774 6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC
Q 015348 348 LAFIVSGYLGVALASYTGVTGD 369 (408)
Q Consensus 348 lg~~ig~~~~g~l~~~~g~~~~ 369 (408)
+|-.+|.+++|.+.+.+|...+
T Consensus 507 lG~g~GslIGG~~v~~fg~~tt 528 (618)
T KOG3762|consen 507 LGKGLGSLIGGFVVERFGARTT 528 (618)
T ss_pred cCcchhhhhhhhhheeehhHHH
Confidence 8999999999999999886443
No 130
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.37 E-value=8e-12 Score=116.11 Aligned_cols=149 Identities=11% Similarity=0.125 Sum_probs=118.1
Q ss_pred HHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 015348 15 PSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASI 93 (408)
Q Consensus 15 ~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 93 (408)
..+.+...++..+..+. .++.|+++|| +|||+++..+.+...++..+.........+.+.+++.+++.|++.+.
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr-----~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~ 324 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKR-----FGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDF 324 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHH
Confidence 35668888877765555 8899999999 99999999999988887766665321111346677789999999999
Q ss_pred HHhhHHHHHHhhccCCCccchhhccCcchhHHHHH-HHHHHHHHHHHHHHHHHhhc------CChhhHHHHHHHHHHHHH
Q 015348 94 AEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVW-MSSSMGGVLGNLLVGFAIDR------FSPPSMFLFFGLLVVLQF 166 (408)
Q Consensus 94 ~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~ig~~l~~~l~~~------~g~~~~f~i~~~~~~~~~ 166 (408)
..+....++.|..|++ +|++.+++.+ ...++|.++||.++|.+.++ +||+..|.+.+++.++..
T Consensus 325 ~~~~~~~~i~~~~p~~---------~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~ 395 (418)
T TIGR00889 325 FNISGSVFVEKEVPVH---------IRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILA 395 (418)
T ss_pred HHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence 8888889999999875 4999999997 57889999999999999987 469999998888877776
Q ss_pred HHhh-hcccccc
Q 015348 167 FITI-AVRESAL 177 (408)
Q Consensus 167 ~~~~-~~~e~~~ 177 (408)
+... ++||+.+
T Consensus 396 ~l~~~~~~~~~~ 407 (418)
T TIGR00889 396 VLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHhCCccc
Confidence 5544 4776643
No 131
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.37 E-value=7.6e-12 Score=115.42 Aligned_cols=148 Identities=11% Similarity=-0.022 Sum_probs=109.9
Q ss_pred cchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHH
Q 015348 201 KPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAV 280 (408)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 280 (408)
+|+++.+.+..++............++. .++++.++.+.++......+...+..++.|++.||+++|+++..+..+..+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLL 80 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHH
Confidence 3455555555555333222222222222 456788888999999999999999999999999999999999988877766
Q ss_pred HHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 281 FMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVA 359 (408)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~ 359 (408)
..+.... . ... ....+..+++.+...|. .+++.|.+|+++|++++|+.+...+++..+||.++|.
T Consensus 81 ~~~~~~~---------~--~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 81 GCLLMLF---------G--IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred HHHHHHH---------H--HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443211 0 111 23345667777778888 8999999999999999999999999999999999999
Q ss_pred HHHh
Q 015348 360 LASY 363 (408)
Q Consensus 360 l~~~ 363 (408)
+.+.
T Consensus 147 l~~~ 150 (393)
T PRK11195 147 LADP 150 (393)
T ss_pred HHHH
Confidence 9985
No 132
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.36 E-value=4.2e-12 Score=117.08 Aligned_cols=128 Identities=12% Similarity=0.097 Sum_probs=101.9
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
...+++|.++.+.++..+...++..++.++.|++.||+|+|+.+..+..+..+..+.... .++.+....
T Consensus 30 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 98 (385)
T TIGR00710 30 EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL-----------SNNIETLLV 98 (385)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-----------HccHHHHHH
Confidence 345678999999999999999999999999999999999999988877666655444221 122223444
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..+..+++.....+. .+++.|..|+++|++.+|+.+....++..+++.+++.+.+..|.
T Consensus 99 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 158 (385)
T TIGR00710 99 LRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW 158 (385)
T ss_pred HHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 455566665555555 88999999999999999999999999999999999999887664
No 133
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.35 E-value=2.9e-11 Score=114.99 Aligned_cols=162 Identities=14% Similarity=0.134 Sum_probs=116.5
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHH-HHHhccCcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLA-IAILSQSSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 80 (408)
++.|+++++|.++.+.++......++..+ .++.|+++|| +|||+.+..+.+...++... ..... ..+...+
T Consensus 273 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-----~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 345 (490)
T PRK10642 273 MPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-----FGRRPFVILGSVALFVLAIPAFILIN--SNVIGLI 345 (490)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHHHHHh--CCCHHHH
Confidence 34567778899998877776666666555 8889999999 99999888877644433322 22211 1156677
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC-ChhhHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF-SPPSMFLFFG 159 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~-g~~~~f~i~~ 159 (408)
++.+++.+++.+.......+++.|.+|++ .|++..+..+....++..++|.+.+++.+.. +|+.++++..
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~---------~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~ 416 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTH---------IRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLM 416 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCc---------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 78888888887777677778888998876 4999888755555666778898888887764 4777777776
Q ss_pred HHHHHHHHHhhhcccccccCC
Q 015348 160 LLVVLQFFITIAVRESALKLP 180 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~~~~~~ 180 (408)
+.+++..+..+++||+++...
T Consensus 417 ~~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 417 VVAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHhccccCCCC
Confidence 777666666667899876533
No 134
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=8.5e-12 Score=115.38 Aligned_cols=162 Identities=13% Similarity=0.068 Sum_probs=113.2
Q ss_pred chhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHH
Q 015348 202 PEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVF 281 (408)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 281 (408)
+.++......++............+.+..+++|.|..+.|+..+...++..++.++.|++.||+|+|+.+..+.+...+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 34444444444433333333444444566779999999999999999999999999999999999999988877665544
Q ss_pred HHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 282 MISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
.+....... .. .....+.+.+....+..+++.....|. .+++.+..|+++|++++|..+...+.+..++|.+++.+
T Consensus 95 ~~~~~~~~~-~~--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l 171 (392)
T PRK12382 95 GLAYLLAAI-LP--VSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL 171 (392)
T ss_pred HHHHHhhhc-cc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 322111000 00 001122234455556677776666665 77888999999999999999999999999999999999
Q ss_pred HHhcCC
Q 015348 361 ASYTGV 366 (408)
Q Consensus 361 ~~~~g~ 366 (408)
.+..|+
T Consensus 172 ~~~~g~ 177 (392)
T PRK12382 172 HSHFGF 177 (392)
T ss_pred HhccCh
Confidence 887664
No 135
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=1.8e-11 Score=114.54 Aligned_cols=127 Identities=13% Similarity=0.014 Sum_probs=99.4
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
+.+++|.+..+.|++.+...++..++.++.|++.||+|+|+.+..+.++..+..+.... ..+.+.+...
T Consensus 49 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~ 117 (434)
T PRK11663 49 MLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF-----------SSSLWAFALL 117 (434)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH-----------HhHHHHHHHH
Confidence 45568999999999999999999999999999999999999988887776665544221 1222233333
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+..+++.+...|. ..++.+..|+++|++.+|+.+...++|..+++.+.+.+.+..|+
T Consensus 118 ~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw 176 (434)
T PRK11663 118 WVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW 176 (434)
T ss_pred HHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence 34445555444455 78889999999999999999999999999999999999887664
No 136
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.33 E-value=1.5e-11 Score=113.48 Aligned_cols=127 Identities=14% Similarity=0.241 Sum_probs=104.6
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
+.+++|.++.+.|+..+...++..++.++.|++.||+|+|+.+..+.++.++..+.... .++.+.+...
T Consensus 46 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~ 114 (394)
T PRK10213 46 MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF-----------ANSFSLLLIG 114 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH-----------HChHHHHHHH
Confidence 45678999999999999999999999999999999999999998888887765544221 1233345555
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+..+++.+...|. ..++.|..|+++|+++.++.....+++..++|.+++.+.+.+|+
T Consensus 115 r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw 173 (394)
T PRK10213 115 RACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGW 173 (394)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH
Confidence 66677776666677 88889999999999999999999999999999999999988764
No 137
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.32 E-value=2.5e-11 Score=113.16 Aligned_cols=156 Identities=11% Similarity=0.088 Sum_probs=126.8
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
+.|+++.+|.++.+.|++.+...++.++ .++.|++.|| .++++.+..+.+...++.++..+.+ +.+...+
T Consensus 247 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~ 317 (417)
T PRK10489 247 PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-----ARPGLLMLLSTLGSFLAVGLFGLMP----MWILAVL 317 (417)
T ss_pred HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-----cCcchHHHHHHHHHHHHHHHHHccc----hHHHHHH
Confidence 4567677999999999999888776666 7889999999 8888888888777777777776666 7777778
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
..++.|++.+...+...+++.|..|++ .||+.+++.+...++|..+||.+.|.+.+..|++..+++.+...
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~---------~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~ 388 (417)
T PRK10489 318 CLALFGYLSAISSLLQYTLLQTQTPDE---------MLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGL 388 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCHH---------HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHH
Confidence 888899998888887778888888865 49999999999999999999999999999999999988877766
Q ss_pred HHHHH-Hhhhcccccc
Q 015348 163 VLQFF-ITIAVRESAL 177 (408)
Q Consensus 163 ~~~~~-~~~~~~e~~~ 177 (408)
++... ....++|.++
T Consensus 389 ~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 389 LIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHHHHHhcccccc
Confidence 65544 3444666544
No 138
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.32 E-value=1.4e-11 Score=113.40 Aligned_cols=128 Identities=13% Similarity=0.083 Sum_probs=103.0
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
...+++|.+..+.|+..+...++..++.++.|++.||+|+|+.+..+..+.++..+... ..++.+.+..
T Consensus 28 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~-----------~~~~~~~l~~ 96 (382)
T PRK10091 28 ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFT-----------LSSSYLMLAI 96 (382)
T ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH-----------HhCcHHHHHH
Confidence 35667899999999999999999999999999999999999999888877776654422 1233334555
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..+..+++.+...+. ...+.+..|+++|++.++.......++..++|.+++.+.+..|+
T Consensus 97 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 156 (382)
T PRK10091 97 GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSW 156 (382)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccH
Confidence 566677766655566 77788999999999999999999999999999999999886654
No 139
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.31 E-value=9.5e-12 Score=115.08 Aligned_cols=134 Identities=14% Similarity=0.116 Sum_probs=105.0
Q ss_pred cccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcC
Q 015348 220 VLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVP 299 (408)
Q Consensus 220 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (408)
......+.|+.+++|.++.+.|+......+...+..++.|++.||+++|+.+..+.....+..+.... .
T Consensus 28 ~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~-----------~ 96 (400)
T PRK11646 28 VVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI-----------A 96 (400)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH-----------h
Confidence 33444455567789999999999999999999999999999999999999998887777766554221 1
Q ss_pred ceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 300 DSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
++.+.+....+..+++.+...|. .+++.+..|+++|++++|+.+...++|..+||.++|.+. ..|
T Consensus 97 ~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 97 HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 22333444555566666555566 788899999999999999999999999999999999998 444
No 140
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.31 E-value=2.8e-11 Score=112.21 Aligned_cols=149 Identities=16% Similarity=0.164 Sum_probs=118.2
Q ss_pred ccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 015348 10 SLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSN 88 (408)
Q Consensus 10 ~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 88 (408)
+.|.+ +.+...+...+..+. .++.|++.|| ++||+.+..+.....++..+....+ +.+..++..++.|
T Consensus 245 ~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r-----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G 313 (399)
T PRK05122 245 ARGWD--GAALALTLFGVAFVGARLLFGNLINR-----LGGLRVAIVSLLVEILGLLLLWLAP----SPWMALIGAALTG 313 (399)
T ss_pred Hcccc--cchHHHHHHHHHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHH
Confidence 34553 334444555555555 7889999999 9999999888888888877777776 7777888899999
Q ss_pred HHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHH
Q 015348 89 LGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFI 168 (408)
Q Consensus 89 ~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 168 (408)
++.+...+...+...|..|++ +|++..+.++....+|..+++.+.|.+.+..||+..|++.+...++..+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~---------~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 384 (399)
T PRK05122 314 FGFSLVFPALGVEAVKRVPPQ---------NRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLAL 384 (399)
T ss_pred HhHHHHHHHHHHHHHHhCCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 999988887777777877654 49999999999999999999999999999999999999988888877766
Q ss_pred hhhccccccc
Q 015348 169 TIAVRESALK 178 (408)
Q Consensus 169 ~~~~~e~~~~ 178 (408)
..++++++++
T Consensus 385 ~~~~~~~~~~ 394 (399)
T PRK05122 385 TWLLYRRAPR 394 (399)
T ss_pred HHHhcccccc
Confidence 6666554443
No 141
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.31 E-value=1.7e-11 Score=114.37 Aligned_cols=147 Identities=12% Similarity=0.106 Sum_probs=119.4
Q ss_pred CCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHH
Q 015348 12 NVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLG 90 (408)
Q Consensus 12 ~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 90 (408)
+.+..+.|.+.++..+.... .+++|+++|| +|||+.+..+..+..++.++.++.+ +++.++..+++.+++
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-----~g~~~~~~~~~~l~~~~~~l~~~~~----~~~~~~~~~~l~g~~ 328 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINR-----IGAKNALLLAGTIMAVRIIGSGFAT----GPLEVSILKLLHAFE 328 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcchhhHHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHH
Confidence 66778889888888765555 8899999999 9999999998888888888888877 888888899999999
Q ss_pred HHHHHhhHHHHHHhhccCCCccchhhccCcchhHHH-HHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHh
Q 015348 91 ASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSF-VWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFIT 169 (408)
Q Consensus 91 ~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 169 (408)
.+...+....++.+..|++ .+++..+. .+....+|.++++.+.|++.+..||+..|.+.+++.++..+..
T Consensus 329 ~~~~~~~~~~~~~~~~~~~---------~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 329 VPFLLVGVFKYITLNFDVR---------LSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHHHHHHHHHHHHHHcCcc---------ceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Confidence 8888777778888888764 36665544 5667889999999999999999999999999888877665554
Q ss_pred hh-ccccc
Q 015348 170 IA-VRESA 176 (408)
Q Consensus 170 ~~-~~e~~ 176 (408)
++ .++++
T Consensus 400 ~~~~~~~~ 407 (420)
T PRK09528 400 VFTLSGDR 407 (420)
T ss_pred HHHhcCCc
Confidence 44 55443
No 142
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.30 E-value=2.3e-11 Score=110.49 Aligned_cols=150 Identities=27% Similarity=0.359 Sum_probs=133.3
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchh-HHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVP-YIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
+.+.++.+|.++.+.+...+...+...+ .++.|+++|| +|||+ .+..+..+..++.+.....+ +.+...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~ 269 (352)
T cd06174 199 PLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-----LGRRRLLLLIGLLLAALGLLLLALAP----SLALLL 269 (352)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhhhHHHHHHHHHHHHHHHHHHHhc----cHHHHH
Confidence 4566666799999999999998876666 8999999999 99999 99999999999998888887 788899
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
+..++.|++.+...+...+++.|..|++ +|++.++..+...++|..+++.+.+.+.+..+|+..+.+.+++
T Consensus 270 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~ 340 (352)
T cd06174 270 VALLLLGFGLGFAFPALLTLASELAPPE---------ARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAAL 340 (352)
T ss_pred HHHHHHHHHHhccchhHHHHHHhhcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHH
Confidence 9999999999999999999999998875 4999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhh
Q 015348 162 VVLQFFITIA 171 (408)
Q Consensus 162 ~~~~~~~~~~ 171 (408)
.++..+...+
T Consensus 341 ~~i~~i~~~~ 350 (352)
T cd06174 341 ALLAALLLLL 350 (352)
T ss_pred HHHHHHHhee
Confidence 8887665543
No 143
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.30 E-value=6.8e-12 Score=114.15 Aligned_cols=128 Identities=18% Similarity=0.166 Sum_probs=104.9
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
+..+++|.+..+.+++.+...++..++.++.|++.||+|+|+.+..+.++..+..+...+ . ++.+ .+..
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~---------~~~~-~~~~ 90 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF-A---------SNFW-LLLI 90 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH-H---------CCHH-HHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh-h---------hhHH-HHhh
Confidence 456778999999999999999999999999999999999999888887777776333221 0 1223 5666
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..+..+++.....|. ..++.|..|+++|++.+|+.+...++|..++|.+++.+.+..|.
T Consensus 91 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~ 150 (352)
T PF07690_consen 91 ARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGW 150 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHH
T ss_pred hccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccc
Confidence 677778877666777 89999999999999999999999999999999999999877664
No 144
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.28 E-value=5.4e-11 Score=110.64 Aligned_cols=136 Identities=11% Similarity=0.167 Sum_probs=111.5
Q ss_pred HHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHh
Q 015348 18 LQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEV 96 (408)
Q Consensus 18 ~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 96 (408)
.+.+.+...+...+ .+.+|+++|| ++||+.+..+.....++.+...+.+ +.+.+.+.+++.|++.+...+
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr-----~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~ 330 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDR-----IGPEKILITALIFSVLLLIPMSFVQ----TPLQLGILRFLLGAADGALLP 330 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-----cccchhHHHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHhhhHhhHH
Confidence 34444444444444 7889999999 9999999988887777777666666 788888899999999999888
Q ss_pred hHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHhhh
Q 015348 97 ANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFITIA 171 (408)
Q Consensus 97 ~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 171 (408)
...+.+.+..+++ ++|+.++..+....+|..+||.++|.+.+..||+..|.+.+++.++..+..++
T Consensus 331 ~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 331 AVQTLLVYNSSNQ---------IAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHhCCcc---------cceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 8888887777664 48999999999999999999999999999999999999999888887666554
No 145
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.28 E-value=3.7e-11 Score=113.61 Aligned_cols=153 Identities=8% Similarity=0.008 Sum_probs=109.6
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.|+++++|.|+.+.++..+...+..++ .+++|+++|| ++||+.+........++.....+.. ..+.+...
T Consensus 281 ~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-----~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 353 (467)
T PRK09556 281 SPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-----ANGRRALVACIALALIIFTLGVYQH--ATSEYMYL 353 (467)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCCchHHHHHHHHHHHHHHHHHHh--cCcHHHHH
Confidence 35688889999999999998888766666 9999999999 8888876655443333322222221 11565666
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHH-HHHHHHHHHHHHhh------------c
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSM-GGVLGNLLVGFAID------------R 148 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~l~~~l~~------------~ 148 (408)
+.+++.|+..............|..|++ .+|++.++.+...++ |..++|.+.|.+.+ .
T Consensus 354 ~~~~~~G~~~~~~~~~~~~~~~~~~p~~---------~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~ 424 (467)
T PRK09556 354 ASLFALGFLVFGPQLLIGVAAVGFVPKK---------AIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTL 424 (467)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHhhcchh---------hHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccc
Confidence 7777777543222222235666888875 499999999999886 77999999999999 5
Q ss_pred CChhhHHHHHHHHHHHHHHHhhh
Q 015348 149 FSPPSMFLFFGLLVVLQFFITIA 171 (408)
Q Consensus 149 ~g~~~~f~i~~~~~~~~~~~~~~ 171 (408)
.||+..|++..+..++..+..++
T Consensus 425 ~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 425 TGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred cChHHHHHHHHHHHHHHHHHHHH
Confidence 78999999887777776555444
No 146
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.28 E-value=3.9e-11 Score=111.49 Aligned_cols=125 Identities=16% Similarity=0.199 Sum_probs=103.5
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
...+++|.+..+.|+..+...++..++.+..|++.||+|+|+.+..+.++..+..+...+ .++...+..
T Consensus 33 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~ 101 (412)
T TIGR02332 33 TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMF-----------ATGPESLYL 101 (412)
T ss_pred hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-----------hcCHHHHHH
Confidence 567789999999999999999999999999999999999999988887777666554221 133334555
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
..+..+++.+...|. ..++.|..|+++|++..|+.+....+|..+++.+++.+.+.
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 102 LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 667778887777777 67889999999999999999999999999999999988753
No 147
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.27 E-value=4.9e-11 Score=116.49 Aligned_cols=137 Identities=17% Similarity=0.125 Sum_probs=114.4
Q ss_pred HHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHH
Q 015348 22 QNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDA 100 (408)
Q Consensus 22 ~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a 100 (408)
..+..+..+. .++.|+++|| +|||++++++.++.+++.+++++.+ +...+++.+++.+++.+...+...+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr-----~GRr~~l~~~~~lsai~~ll~~~~~----s~~~ll~~~~l~g~~~~~~~~~~~a 671 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDK-----IGRLRMLAGSMVLSCISCFFLSFGN----SESAMIALLCLFGGLSIAAWNALDV 671 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHHHc----cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555 7899999999 9999999999999999988888887 7777788888888888878888889
Q ss_pred HHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHhhhcccccc
Q 015348 101 LVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFITIAVRESAL 177 (408)
Q Consensus 101 ~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~e~~~ 177 (408)
+++|+.|.+. |++.+++.+....+|.++||.+++.+.+. +...+|++.+++.++..++..++||++.
T Consensus 672 ~~aEl~Pt~~---------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 672 LTVELYPSDK---------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred HHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999864 99999999999999999999999988764 5677888888887777777777887654
No 148
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.27 E-value=1.3e-11 Score=112.91 Aligned_cols=130 Identities=12% Similarity=0.094 Sum_probs=101.4
Q ss_pred eccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHH
Q 015348 231 QNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSL 310 (408)
Q Consensus 231 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
++.+.++.+.|+..+...++.+++.++.|++.||+|+|+.+..+..+..+.......... . ...+.+.+....+
T Consensus 27 ~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~ 100 (365)
T TIGR00900 27 LAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVAL-----L-GGLNIWQVYVLAG 100 (365)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH-----c-CCCcHHHHHHHHH
Confidence 447889999999999999999999999999999999999988877666555443221100 0 0012234445556
Q ss_pred HHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 311 LEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 311 ~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..+++.....|. .+++.|..|+++|++.+|..+...++|..++|.+++.+.+..|.
T Consensus 101 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 157 (365)
T TIGR00900 101 ILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGI 157 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 666766666666 88999999999999999999999999999999999999987764
No 149
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.27 E-value=2.8e-11 Score=115.16 Aligned_cols=128 Identities=9% Similarity=-0.082 Sum_probs=102.7
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.+..+.++....+.++.....+..|++.||+|+|+.+..+..+..+..+... ..++.+.++..
T Consensus 32 i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~-----------~a~~~~~li~~ 100 (495)
T PRK14995 32 LSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA-----------FSPTASWLIAT 100 (495)
T ss_pred HHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-----------HcCCHHHHHHH
Confidence 4566899999999999999999999999999999999999999988877776655422 22334455566
Q ss_pred HHHHHHHHHhhhhH-HHHHHHh-cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQV-CPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~-~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
....+++.+...|. ...+.+. .|+++|++.+|+.....++|..+||.++|.+.++.|++
T Consensus 101 r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr 161 (495)
T PRK14995 101 RALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence 67777777767776 5556555 57799999999999999999999999999999887653
No 150
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.26 E-value=3e-11 Score=112.18 Aligned_cols=126 Identities=6% Similarity=0.009 Sum_probs=101.9
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.+..+.++..+...++..++.++.|++.||+|+|+.+..+.++..+..+.... ..+.+.+...
T Consensus 38 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~ 106 (405)
T TIGR00891 38 VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGF-----------APGYITMFIA 106 (405)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-----------hccHHHHHHH
Confidence 45678999999999999999999999999999999999999988877666665444221 1223344455
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.+..+++.+...+. .+++.|..|+++|++..++.+....+|..+++.+++.+.+..+
T Consensus 107 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 107 RLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66667776666666 8889999999999999999999999999999999999988765
No 151
>PRK03545 putative arabinose transporter; Provisional
Probab=99.26 E-value=1.1e-10 Score=107.80 Aligned_cols=148 Identities=13% Similarity=0.058 Sum_probs=114.8
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHH-HHHhccCcchHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLA-IAILSQSSISIFTMS 81 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 81 (408)
..|++++.|.|+.+.+.+.+...+..+. +++.|+++|| ++||+... +.....++... ....+ +.+.++
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-----~~~~~~~~-~~~~~~~~~~~l~~~~~----~~~~~~ 298 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR-----HPSGFLLI-AIALLLVCLLLLLPAAN----SEWHLS 298 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc-----cchhHHHH-HHHHHHHHHHHHHHHhc----hHHHHH
Confidence 3456777899999999998887766555 8899999999 88876544 43333333333 33444 677778
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
+..++.|++.+...+...+.+.+..|+ +|+++++..+....+|..+||.++|.+.+++|++..|++.+.+
T Consensus 299 ~~~~l~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~ 368 (390)
T PRK03545 299 VLSIFWGIAIMCIGLAMQVKVLKLAPD----------ATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAAL 368 (390)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHhCCC----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHH
Confidence 888888998877767666777776553 3889999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhh
Q 015348 162 VVLQFFITIA 171 (408)
Q Consensus 162 ~~~~~~~~~~ 171 (408)
.++..+....
T Consensus 369 ~~~~~~~~~~ 378 (390)
T PRK03545 369 ALAALVWSIL 378 (390)
T ss_pred HHHHHHHHHH
Confidence 8877666554
No 152
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.25 E-value=4.7e-12 Score=112.15 Aligned_cols=131 Identities=24% Similarity=0.274 Sum_probs=102.6
Q ss_pred hhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC---------c
Q 015348 5 FFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS---------S 74 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~---------~ 74 (408)
.|+ +++|++....+.+....- .+.+++|+.|..+||+++|+.||||.+..+.....++.+++.++.+- .
T Consensus 57 Pyl-~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~ 135 (498)
T KOG0637|consen 57 PYL-QSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK 135 (498)
T ss_pred HHH-HHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc
Confidence 344 567777777776666555 55666999999999999999999999999999999999888876641 1
Q ss_pred ----chHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 015348 75 ----ISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGF 144 (408)
Q Consensus 75 ----~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~ 144 (408)
......++...+.-+...+.+.+..+++.|....+++ +-++++++.....+|.++|..++++
T Consensus 136 ~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~--------~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 136 PVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK--------KTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh--------hhccchhHHHHHHhcceeeeecccc
Confidence 2345566667777788888888888999999987662 2228999999999999999988873
No 153
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.25 E-value=5.1e-11 Score=109.10 Aligned_cols=133 Identities=13% Similarity=0.067 Sum_probs=101.7
Q ss_pred ccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCc
Q 015348 221 LTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPD 300 (408)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (408)
.....+.+..+++|.|+.+.++......++..++.++.|++.||+|+|+.+..+.++..+..+.... ..
T Consensus 20 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~-----------~~ 88 (366)
T TIGR00886 20 FSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGL-----------AV 88 (366)
T ss_pred hHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-----------Hh
Confidence 3344444567789999999999999999999999999999999999999988887777666544221 11
Q ss_pred -eEeehhhhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015348 301 -SLYVLIFSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYT 364 (408)
Q Consensus 301 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~ 364 (408)
+.+.+....+..+++.....+...++.+..|+++|++..++.....++|..+++.+++.+.+..
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~ 153 (366)
T TIGR00886 89 QSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSL 153 (366)
T ss_pred hhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 2223444455556655444455778899999999999999999999999999998888777643
No 154
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.25 E-value=1e-10 Score=108.13 Aligned_cols=127 Identities=14% Similarity=0.039 Sum_probs=103.9
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.+..+.+++.....++..++.++.|++.||+|+|+.+..+.++..+....... ..+.+.+...
T Consensus 20 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 88 (399)
T TIGR00893 20 LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF-----------AGAYVSLYIL 88 (399)
T ss_pred HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH-----------HcCHHHHHHH
Confidence 45668999999999999999999999999999999999999998887766665444221 1233345555
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+..+++.+...|. ..++.|..|+++|++.+++.+...++|..+++.+++.+.+..++
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 147 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSW 147 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCc
Confidence 66677777666666 88999999999999999999999999999999999998887664
No 155
>PRK03699 putative transporter; Provisional
Probab=99.24 E-value=7.4e-11 Score=109.09 Aligned_cols=152 Identities=13% Similarity=0.070 Sum_probs=118.8
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++.|+++++|.|+.+.+.+.+...+...+ .++.|+++|| ++||+.+.....+..+...+....+ +.+.+.
T Consensus 228 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-----~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~ 298 (394)
T PRK03699 228 VPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-----FDLQRILTVLAGLALVLMYLFVNTD----DPSHLL 298 (394)
T ss_pred HHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHcC----CchHHH
Confidence 35678888999999999998887766666 8899999999 9999988877776666665555555 666666
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
...++.|++.+...+...+...+..|+ .+++..+.......+|..++|.+.|.+.+..|++..++..+++
T Consensus 299 ~~~~~~G~~~~~~~~~~~~~~~~~~~~----------~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~ 368 (394)
T PRK03699 299 YAILGLGFFSSAIYTTIITLGSQQTKV----------ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGL 368 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccC----------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHH
Confidence 677788887777766666666666553 2556677888888999999999999999999999999988888
Q ss_pred HHHHHHHhhhcc
Q 015348 162 VVLQFFITIAVR 173 (408)
Q Consensus 162 ~~~~~~~~~~~~ 173 (408)
..+..+.+...+
T Consensus 369 ~~~~~~~~~~~~ 380 (394)
T PRK03699 369 YAVVFVMCILLG 380 (394)
T ss_pred HHHHHHHHHHHH
Confidence 777766555433
No 156
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.24 E-value=1.8e-10 Score=106.10 Aligned_cols=146 Identities=14% Similarity=0.176 Sum_probs=123.0
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
+.|++ |+|.|+.++|.+.+...+..+. .++.|++.|| +|+|+.+.++.+...+...++++.+ +.+.++.
T Consensus 229 ~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-----~g~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~ 298 (382)
T TIGR00902 229 AIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQN-----CSARDLLLISAIACVGRWAIIGAIE----AFPLIFL 298 (382)
T ss_pred HHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-----CCHHHHHHHHHHHHHHHHHHHHhHh----hHHHHHH
Confidence 45664 5999999999998876666665 7889999999 9999999999999999999998888 9999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHH-HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVW-MSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
...+.|+..+...+....++.+. |++ ++++.++.++ ....+|..+|+.++|.+.++.|+ ..|++.+.+
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~---------~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~ 367 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGS---------EIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAII 367 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHh---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHH
Confidence 99999999999999988888876 543 4788899876 56789999999999999999996 667777777
Q ss_pred HHHHHHHhh
Q 015348 162 VVLQFFITI 170 (408)
Q Consensus 162 ~~~~~~~~~ 170 (408)
.++..+...
T Consensus 368 ~~~~~~~~~ 376 (382)
T TIGR00902 368 AAAAFFLIP 376 (382)
T ss_pred HHHHHHHHH
Confidence 776654443
No 157
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.24 E-value=7.8e-11 Score=108.96 Aligned_cols=126 Identities=8% Similarity=-0.006 Sum_probs=97.5
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.+..+.++..+...++..++.++.|++.||+|+|+.+..+.....+....... ..+.+.....
T Consensus 29 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~-----------~~~~~~~~~~ 97 (392)
T PRK10473 29 IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL-----------AETSSLFLAG 97 (392)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH-----------hCcHHHHHHH
Confidence 45668999999999999999999999999999999999999888877666655444221 1122233334
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.+..+++.....+. .+++.|..|+++|++..+..+...+++..++|.+++.+.+..|
T Consensus 98 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g 155 (392)
T PRK10473 98 RFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP 155 (392)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 45556655544554 7889999999999999999999999999999999998877655
No 158
>PRK11043 putative transporter; Provisional
Probab=99.23 E-value=8.2e-11 Score=109.17 Aligned_cols=127 Identities=15% Similarity=0.132 Sum_probs=97.9
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.++.+.++..+...++..++.++.|++.||+++|+.+..+..+..+..+.... .++.+.+...
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~ 100 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW-----------VESAAQLLVL 100 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH-----------hcCHHHHHHH
Confidence 45678999999999999999999999999999999999999988777666554443221 1222233444
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+..+++.....+. ..++.|..|++++++.++..+...+++..++|.+++.+.+..|+
T Consensus 101 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 159 (401)
T PRK11043 101 RFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGW 159 (401)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 45555554444444 67888999999999999999999999999999999999987664
No 159
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.23 E-value=1.5e-10 Score=106.52 Aligned_cols=126 Identities=12% Similarity=0.146 Sum_probs=100.2
Q ss_pred EeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhH
Q 015348 230 TQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSS 309 (408)
Q Consensus 230 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
.+++|.++.+.++..+...++..++.++.|++.||+|+|+.+..+.+...+....... .++.+......
T Consensus 18 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~ 86 (377)
T PRK11102 18 AADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL-----------AQTIDQLIYMR 86 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH-----------HccHHHHHHHH
Confidence 3558999999999999999999999999999999999999988887776665544221 12222344445
Q ss_pred HHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 310 LLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 310 ~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
+..+++.....+. .+++.|..|+++|++..++.+....+|..++|.+++.+.+..|.
T Consensus 87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 144 (377)
T PRK11102 87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSW 144 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh
Confidence 5556665555555 88899999999999999999999999999999999999987664
No 160
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.23 E-value=4e-11 Score=105.68 Aligned_cols=131 Identities=13% Similarity=0.050 Sum_probs=109.5
Q ss_pred EEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeeh
Q 015348 226 FFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVL 305 (408)
Q Consensus 226 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (408)
.+...++.++|.++.|++.+...++--++.++.|.++||.+.|+.+..+.++.++..++ +++.++.+.+
T Consensus 52 ~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil-----------~Gfs~s~~~~ 120 (448)
T COG2271 52 MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNIL-----------FGFSPSLFLF 120 (448)
T ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHH-----------HhhhhHHHHH
Confidence 34456678899999999999999999999999999999999999999999999888777 4555555555
Q ss_pred hhhHHHHHHHHH-hhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCC
Q 015348 306 IFSSLLEVMFFF-KILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLG--VALASYTGVT 367 (408)
Q Consensus 306 ~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~--g~l~~~~g~~ 367 (408)
.......+..++ .+.|+...+.+-.|+++||+..|+.|+..|+|+.+.|.+. +.+.++.+..
T Consensus 121 ~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~ 185 (448)
T COG2271 121 AVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWR 185 (448)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchh
Confidence 556666676664 4556688899999999999999999999999999999988 8888776543
No 161
>TIGR00895 2A0115 benzoate transport.
Probab=99.23 E-value=1.8e-11 Score=113.33 Aligned_cols=130 Identities=13% Similarity=0.205 Sum_probs=102.5
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
++..+++|.+..+.++......++.+++.++.+++.||+++|+.+..+..+..+..+.... ..+.+.+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 109 (398)
T TIGR00895 41 PAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL-----------ATNVTQLL 109 (398)
T ss_pred HHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-----------ccchHHHH
Confidence 3455668999999999999999999999999999999999999888877666655444221 12222344
Q ss_pred hhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 307 FSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
...+..+++.....|. .+++.|..|+++|++..|+.+...++|..+++.+++.+.+..|..
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 110 ILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWR 171 (398)
T ss_pred HHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccce
Confidence 4455566665555565 889999999999999999999999999999999999999877654
No 162
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.23 E-value=1.8e-10 Score=104.88 Aligned_cols=128 Identities=16% Similarity=0.108 Sum_probs=96.0
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.++.+.|+..+...++..++.+..|++.||+|||+.+..+...... ...... ...+...+...
T Consensus 17 i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~-~~~~~~----------~~~~~~~l~~~ 85 (368)
T TIGR00903 17 VAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAA-AAGRLL----------DPFNYEWLLAC 85 (368)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH-HHHHHH----------HhccHHHHHHH
Confidence 4556899999999999999999999999999999999988765443332222 211111 10123345556
Q ss_pred HHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 309 SLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
-+..+++.+...+......|..|+++|+++.++.+....+|..+++.+++.+.+..|++
T Consensus 86 R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr 144 (368)
T TIGR00903 86 QLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQ 144 (368)
T ss_pred HHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH
Confidence 66677776655555666789999999999999999999999999999999999876653
No 163
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.22 E-value=1.2e-10 Score=103.74 Aligned_cols=150 Identities=19% Similarity=0.230 Sum_probs=121.9
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.|....|.+.+.++.+..++.++...+.+|++||+++.....+..+..+... ...++..+...
T Consensus 39 iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~a-----------lAp~f~~Ll~a 107 (394)
T COG2814 39 IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSA-----------LAPSFAVLLLA 107 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH-----------HhccHHHHHHH
Confidence 4566999999999999999999999999999999999999999888888777765532 23455567777
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhhh
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCTIL 387 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 387 (408)
-+..++..+.+.+. .+...+++||++|+++.++..+-..++..+|..++.++.|.+|++..+ ..+..+..+.
T Consensus 108 R~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F-------~~ia~l~ll~ 180 (394)
T COG2814 108 RALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF-------LAIAVLALLA 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH-------HHHHHHHHHH
Confidence 88888888888888 899999999999999999999999999999999999999999976432 2333333333
Q ss_pred hhhhhhccC
Q 015348 388 PLYWSYFMP 396 (408)
Q Consensus 388 ~~~~~~~~~ 396 (408)
.+.....+|
T Consensus 181 ~~~~~~~lP 189 (394)
T COG2814 181 LLLLWKLLP 189 (394)
T ss_pred HHHHHHhCC
Confidence 344455677
No 164
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.22 E-value=1.4e-09 Score=97.39 Aligned_cols=315 Identities=11% Similarity=0.088 Sum_probs=191.3
Q ss_pred hhhhhhc-cCCCHHHHHHHH-Hhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHH
Q 015348 4 NFFLKDS-LNVDPSTLQLLQ-NSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 4 ~~~l~~~-l~~s~~~~g~~~-~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (408)
..|+.+. .|++..|+.--. -...-+++. ..+...+.|. .|.||+++++.+...+...++.+.+ +.+.+
T Consensus 27 ~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-----l~Ykpviil~~~~~i~t~~lll~~~----sv~~m 97 (412)
T PF01770_consen 27 TPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-----LRYKPVIILQALSYIITWLLLLFGT----SVLAM 97 (412)
T ss_pred hHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-----hhhhHHHHHHHHHHHHHHHHHHHHC----cHHHH
Confidence 3455554 899998875321 111122333 5678899999 9999999999999999999988988 99999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh--cCChhhHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID--RFSPPSMFLFF 158 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~--~~g~~~~f~i~ 158 (408)
-+.-+..|++.+. ..+..+++-...|+++ .-++.+....+..+|..++.++|-.+.. ..+++....+.
T Consensus 98 q~~q~~yg~~~a~-evay~sYiys~v~~~~---------yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~is 167 (412)
T PF01770_consen 98 QLMQFFYGLATAA-EVAYYSYIYSVVDKEH---------YQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYIS 167 (412)
T ss_pred HHHHHHHHHHHHH-HHHHHHHheeecCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 9999999998887 4555588877777653 5566777777888888888888887776 35577777776
Q ss_pred HHHHHHHHHHhhhccccccc-------C----------C---CCCc------------c----hhHHHHHHHHHHhcccc
Q 015348 159 GLLVVLQFFITIAVRESALK-------L----------P---KSQS------------N----VGIRAQLSELSAALRKP 202 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~e~~~~-------~----------~---~~~~------------~----~~~~~~~~~~~~~~~~~ 202 (408)
.....++.+..+++|.+++. + + +.++ + ...+..++++++..+||
T Consensus 168 l~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~ 247 (412)
T PF01770_consen 168 LASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNP 247 (412)
T ss_pred HHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCc
Confidence 66666666666666643210 0 0 0000 0 01123345666778899
Q ss_pred hhHHHHHHHHhhhcccccccceeEEEEE--eccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHH
Q 015348 203 EIMYSVAWFAASYSIIPVLTGTMFFYQT--QNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAV 280 (408)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 280 (408)
.++...+...+..+......+....... +.-+-+....|...+...+.+.++.+..|++..++.+..-+..+.....-
T Consensus 248 ~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~ 327 (412)
T PF01770_consen 248 RLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQ 327 (412)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHH
Confidence 8888777766644433332221111111 11233445567788888888888888888885555543333322222111
Q ss_pred HHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHH
Q 015348 281 FMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAV 346 (408)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~ 346 (408)
+.++ +. .....+.+......+..........++ ..-+++...++.-|-++|+.+.+.
T Consensus 328 a~~L-~l--------m~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 328 AGLL-FL--------MSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHH-HH--------HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHH
Confidence 1111 11 112233333444444333333333344 555666677777788888765543
No 165
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=1.3e-09 Score=103.50 Aligned_cols=158 Identities=18% Similarity=0.259 Sum_probs=116.2
Q ss_pred hhhhhhccCCCHHHHHHHHH-hhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQN-SANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~-~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
+.|+.+++|.|+.+.+.+.. ...+..++ .+++|+++|| ++||+.+.++.++..+..+..........+.+.+.
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-----~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~ 320 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-----LSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMG 320 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 34666789999999999875 44455555 8899999999 99888877666554444333221110112455555
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
...++..+..++..+...++..+..+++. +++.++..+...++|..+++.++|.+.+..||+..|.+.+++
T Consensus 321 ~~~~l~~~~~g~~~~~~~a~~~~l~~~~~---------~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~ 391 (491)
T PRK11010 321 AAVFFENLCGGMGTAAFVALLMTLCNKSF---------SATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAA 391 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCC---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 56677666666666666788888888753 788889888899999999988999999999999999999888
Q ss_pred HHHHHHHhhhcccc
Q 015348 162 VVLQFFITIAVRES 175 (408)
Q Consensus 162 ~~~~~~~~~~~~e~ 175 (408)
.++..+...+++++
T Consensus 392 ~l~~l~~~~~~~~~ 405 (491)
T PRK11010 392 AVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHhc
Confidence 88877666665544
No 166
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.21 E-value=4.7e-11 Score=112.62 Aligned_cols=140 Identities=10% Similarity=-0.064 Sum_probs=105.8
Q ss_pred cccccccceeEEEEEec--cCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc-CCCceehHHHHHHHHHHHHHhHhhhccc
Q 015348 216 SIIPVLTGTMFFYQTQN--LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKS-VSPRKLISAIQAMMAVFMISDVLFVKGV 292 (408)
Q Consensus 216 ~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (408)
..........+.|..++ +|++..+.|.......++..++.++.|++.|| +|+|+.+..+.++..+......
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~------ 97 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLA------ 97 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHH------
Confidence 33344445556666665 89999999999999999999999999999999 8999999988887776654422
Q ss_pred ccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 293 YREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGC---EGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~---~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.....+.+.......+++.+...|. .+++.+..|+++ |++++++.....++|..+||.++|.+.+..|+
T Consensus 98 -----~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 98 -----MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred -----hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 1122223333444556666555555 778889888754 88899999999999999999999999987664
No 167
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.21 E-value=2.5e-10 Score=105.05 Aligned_cols=149 Identities=11% Similarity=0.170 Sum_probs=112.0
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
+.|++ +.|.++++.+.+.+...+..+. +++.|+++|| ++||+.+..+.....++..... . .. ....
T Consensus 224 p~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-----~~~~~~l~~~~~~~~~~~~~~~--~----~~-~~~~ 290 (381)
T PRK03633 224 PLYLN-HQGMSDASIGFWMALLVSAGILGQWPIGRLADR-----FGRLLVLRVQVFVVILGSIAML--S----QA-AMAP 290 (381)
T ss_pred HHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-----cCcHHHHHHHHHHHHHHHHHHh--h----hH-HHHH
Confidence 45664 5799999999988877765555 8889999999 9999998888777766654432 2 22 2234
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
..++.|++.....+...+.+.|..|+++ ++...+..+...++|..+||.++|++.++.||++.|.+.+.+.
T Consensus 291 ~~~l~g~~~~~~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~ 361 (381)
T PRK03633 291 ALFILGAAGFTLYPVAMAWACEKVEHHE---------LVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVS 361 (381)
T ss_pred HHHHHHHHHHhHHHHHHHHHHccCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHH
Confidence 5666777766667777788888776643 5666777777899999999999999999999999999988877
Q ss_pred HHHHHHhhhccc
Q 015348 163 VLQFFITIAVRE 174 (408)
Q Consensus 163 ~~~~~~~~~~~e 174 (408)
++..+..++.++
T Consensus 362 l~~~~~~~~~~~ 373 (381)
T PRK03633 362 FIYLLMLLRKAG 373 (381)
T ss_pred HHHHHHHHhccC
Confidence 766555544433
No 168
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.21 E-value=4.4e-11 Score=113.94 Aligned_cols=129 Identities=15% Similarity=0.003 Sum_probs=105.6
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
...+++|.+..+.++......++..++.++.|++.||+|+|+.+..+.++..+..+... ..++...+..
T Consensus 27 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~ 95 (485)
T TIGR00711 27 TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG-----------VAPNLELMII 95 (485)
T ss_pred HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh-----------CcCCHHHHHH
Confidence 34566899999999999999999999999999999999999998888777666554421 2233334555
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVT 367 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~ 367 (408)
..+..+++.+...|. .+++.|..|+++|+++.++......+|..++|.++|++.++.|++
T Consensus 96 ~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~ 156 (485)
T TIGR00711 96 FRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWR 156 (485)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCce
Confidence 666777777666666 889999999999999999999999999999999999999877754
No 169
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.21 E-value=1.8e-10 Score=106.89 Aligned_cols=154 Identities=8% Similarity=0.014 Sum_probs=106.3
Q ss_pred hHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHH
Q 015348 204 IMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMI 283 (408)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 283 (408)
+....+..++............+++. +++|.++.+.|...+...++..++.++.|++.||+++|+.+..+..+..+..+
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~ 93 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHA 93 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 33333443332333333333344444 56899999999999999999999999999999999999999888777666543
Q ss_pred HhHhhhcccccccCc-CceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 015348 284 SDVLFVKGVYREMGV-PDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAF-IVSGYLGVAL 360 (408)
Q Consensus 284 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~-~ig~~~~g~l 360 (408)
.... .+. ..+++.+.......+++.....+. ...+.+..|+++|+++.|+.++..++|. .++|.+++.+
T Consensus 94 ~~~~--------~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l 165 (402)
T TIGR00897 94 AFIV--------FGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYA 165 (402)
T ss_pred HHHH--------HhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3211 011 112223333444455554444444 6677888999999999999999999997 5889999998
Q ss_pred HHhcCC
Q 015348 361 ASYTGV 366 (408)
Q Consensus 361 ~~~~g~ 366 (408)
.+..|.
T Consensus 166 ~~~~g~ 171 (402)
T TIGR00897 166 IPAFGE 171 (402)
T ss_pred ccccch
Confidence 877664
No 170
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.20 E-value=2.5e-10 Score=106.09 Aligned_cols=150 Identities=15% Similarity=0.022 Sum_probs=116.7
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.|+ ++.|.++.+.+.+.+...+..++ .++.|+++|| .|||+.+..+.+...++.+.....+ +.+.+.+.
T Consensus 245 ~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-----~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 314 (406)
T PRK11551 245 SLL-VGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-----LRPRRVVLLIYAGILASLAALAAAP----SFAGMLLA 314 (406)
T ss_pred HHH-HhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHHhcC----cHHHHHHH
Confidence 445 45799999999998888866665 8899999999 9999988887766666666666666 66677777
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhhHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-PPSMFLFFGLLV 162 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-~~~~f~i~~~~~ 162 (408)
.++.|++.+...+...++..|..|+++ |++..++.+....+|..+||.++|.+.++.+ |...++......
T Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~ 385 (406)
T PRK11551 315 GFAAGLFVVGGQSVLYALAPLFYPTQV---------RGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVI 385 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcchhh---------hhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHH
Confidence 788888877777777789999998764 9999999999999999999999999988754 555666665555
Q ss_pred HHHHHHhhhcc
Q 015348 163 VLQFFITIAVR 173 (408)
Q Consensus 163 ~~~~~~~~~~~ 173 (408)
++..+..+++.
T Consensus 386 ~~~~~~~~~~~ 396 (406)
T PRK11551 386 LVAALAALLLV 396 (406)
T ss_pred HHHHHHHHHHh
Confidence 55555544443
No 171
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.18 E-value=1.3e-10 Score=106.65 Aligned_cols=141 Identities=18% Similarity=0.225 Sum_probs=115.4
Q ss_pred hccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 015348 9 DSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLS 87 (408)
Q Consensus 9 ~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (408)
+++|.++.+.+.+.+...+...+ .++.|+++|| +|||+.+..+.+...++.+.+.+.+. .+...++...++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-----~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 305 (377)
T TIGR00890 233 QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-----IGRQKTMSIVFGISAVGMAAMLFIPM--LNDVLFLATVALV 305 (377)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhhhhhhhHHHHHHHHHHHHHHHccc--chhHHHHHHHHHH
Confidence 67899999999988888866665 8999999999 99999999888888888777766551 1223344556777
Q ss_pred HHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 88 NLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 88 g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
+++.+...+..++++.|..|+++ |++.++..+....+|..++|.+.|.+.+..||+..|.+.+++.++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPAN---------SAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhh---------hhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 88877777777788899888754 9999999999999999999999999999999999999888776654
No 172
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.18 E-value=4.4e-10 Score=104.43 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=98.0
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.++.+.++......++..++.++.|++.||+|+|+.+..+.....+..+.... .++.+.+...
T Consensus 39 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-----------~~~~~~l~~~ 107 (406)
T PRK15402 39 VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL-----------AQSIEQFTLL 107 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-----------HccHHHHHHH
Confidence 44678999999999999999999999999999999999999988877666655444221 1222233444
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+..+++.....+. .+.+.|..|++++++..++......++..++|.+++.+.+..|+
T Consensus 108 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 108 RFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 45555555544555 77888999999999999999888889999999999999887654
No 173
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.18 E-value=3.2e-10 Score=104.54 Aligned_cols=154 Identities=12% Similarity=0.060 Sum_probs=102.6
Q ss_pred chhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHH
Q 015348 202 PEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVF 281 (408)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 281 (408)
|.++...+...+.+..........+....+++|+|..+.+++.++..++..+..+..|++.||+|.|+.+..+..+..+.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 44444444433323322222232333334469999999999999999999999899999999999999988887776655
Q ss_pred HHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 282 MISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
.+...+.+.. ..+++..+....+..+++...+.+....+++..|+++||++.|+....+++|..+++.+...+.
T Consensus 114 ~~~~~~a~~~------~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 114 CVWLGIAVQN------PNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHHHcc------cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4442210000 1123334555556666665544455888999999999999999998778888877766665433
No 174
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.17 E-value=1.4e-10 Score=110.80 Aligned_cols=146 Identities=12% Similarity=0.162 Sum_probs=107.8
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
+.|+++++|.++.+.+.+.+...+..++ .++.|+++|| +|||+.+..+..+..+..+...... ..+.+....
T Consensus 299 p~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-----~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 371 (496)
T PRK03893 299 PTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-----LGTRKAYVCSLLISQLLIIPVFAIG--GANVWVLGL 371 (496)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHhhcc--ccHHHHHHH
Confidence 5677789999999999999988876666 8899999999 9999988887766665554433332 124444444
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
..++.+.......+...+++.|..|++ +|++.+++.+....+|..+||.++|.+.+.+||+..+...+...
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTE---------QRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHH---------HhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 444444333333445557888888865 48999999999999999999999999999999998887665544
Q ss_pred HHH
Q 015348 163 VLQ 165 (408)
Q Consensus 163 ~~~ 165 (408)
.+.
T Consensus 443 ~~~ 445 (496)
T PRK03893 443 TFV 445 (496)
T ss_pred HHH
Confidence 433
No 175
>PRK09952 shikimate transporter; Provisional
Probab=99.16 E-value=9.1e-10 Score=103.19 Aligned_cols=158 Identities=11% Similarity=0.128 Sum_probs=110.0
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
..|+++++|.++.+...+.........+ .+++|+++|| +|||+.+..+.++..++.+.+........+.+.++.
T Consensus 274 ~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-----~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T PRK09952 274 LNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-----FGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFF 348 (438)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 3467788999987655444444433333 7889999999 999999888876655544333221111113444455
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHH-HHHHHHHHHHHHHHHhhcC--ChhhHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMS-SSMGGVLGNLLVGFAIDRF--SPPSMFLFFG 159 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~g~~ig~~l~~~l~~~~--g~~~~f~i~~ 159 (408)
..++.+++.+...+...+++.|..|.+ .|+...++.+.. ..+|..++|.+.+++.+.. +|+..+...+
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~---------~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~ 419 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGAS---------YRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLL 419 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcc---------hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 667778888887777889999999985 387777775444 4588899999999998753 4888888887
Q ss_pred HHHHHHHHHhhhcccc
Q 015348 160 LLVVLQFFITIAVRES 175 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~ 175 (408)
+..++..+..+.++|+
T Consensus 420 ~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 420 AGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHcccc
Confidence 7777777666667664
No 176
>PRK10504 putative transporter; Provisional
Probab=99.16 E-value=4.9e-10 Score=106.30 Aligned_cols=135 Identities=15% Similarity=0.128 Sum_probs=107.2
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
.++|+++.+|.++.+.++......+.... .++.|+++|| +|||+.+..+.....+...++.+.+.. .+.+...
T Consensus 284 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-----~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 357 (471)
T PRK10504 284 TPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-----FGYRRVLVATTLGLALVSLLFMLVALL-GWYYLLP 357 (471)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCchHHHHHHHHHHHHHHHHHHhcccc-ccHHHHH
Confidence 35677778999999999888776665555 6899999999 999999998888777776666554311 1444445
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChh
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPP 152 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~ 152 (408)
...++.|++.+...+..+++..+..|++ .++..++..+....+|..+|+.++|.+.+..|+.
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDN---------LASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHH---------hccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 5677788888888888888888888865 4999999999999999999999999998876653
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.16 E-value=1.8e-10 Score=108.96 Aligned_cols=125 Identities=11% Similarity=0.026 Sum_probs=92.8
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
.+.+++|.+..+.++......++..++.++.|++.||+|+|+.+..+.+...+..++... ..+...+..
T Consensus 61 ~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----------~~s~~~l~~ 129 (476)
T PLN00028 61 IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL-----------VSSATGFIA 129 (476)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-----------hcCHHHHHH
Confidence 356678999999999888888999999999999999999999887776666555443211 112223333
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 308 SSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
..+..+++.....+...++.+..|+++||++.|+.+...++|..+++.+.+.+.+.
T Consensus 130 ~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~ 185 (476)
T PLN00028 130 VRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL 185 (476)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555554445566788999999999999999998889998888777766543
No 178
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.15 E-value=4.3e-10 Score=104.47 Aligned_cols=127 Identities=13% Similarity=0.101 Sum_probs=99.2
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.+..+.+...+...++..++.++.|++.||+|||+.+..+..+..+..+... ..++...+...
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~-----------~a~~~~~l~~~ 110 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATL-----------FTTSMTQFLIA 110 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHH-----------HcCCHHHHHHH
Confidence 3456888999999999999999999999999999999999998888766665544422 11233344555
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+..+++.+...+. .....|..|++++++.+++.+...+++..+||.+++.+.++.|+
T Consensus 111 r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw 169 (413)
T PRK15403 111 RFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW 169 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 56666665544444 67788899999999999999999999999999999999887654
No 179
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.15 E-value=8.2e-10 Score=103.63 Aligned_cols=127 Identities=15% Similarity=0.046 Sum_probs=92.0
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
+..+ .|.++.+.++......++..++.++.|++.||+++|+.+..+.++.++..+..... + ........+..
T Consensus 52 ~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~l~~ 123 (438)
T TIGR00712 52 YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFV----P---WATSSIAIMFV 123 (438)
T ss_pred HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcc----c---cccchHHHHHH
Confidence 3444 59999999999999999999999999999999999998888776666654442210 0 00111112233
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
..+..+++.+...+. ...+.|..|+++|++++|+.+...+++..+++.+.+...+
T Consensus 124 ~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 124 LLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA 179 (438)
T ss_pred HHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 334445555444444 7788899999999999999999999999999887776544
No 180
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.15 E-value=3.5e-10 Score=104.67 Aligned_cols=127 Identities=13% Similarity=0.054 Sum_probs=96.8
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|.|+.+.++......++..++.++.|++.||+|+|+.+..+.....+..+.... .++.+.+...
T Consensus 34 i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~ 102 (394)
T PRK11652 34 MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF-----------AHSLTVLIAA 102 (394)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-----------HccHHHHHHH
Confidence 45678999999999999999999999999999999999999888777666555443211 1222233444
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+..+++.....+. ..+..+..+++++++..+..+....++..++|.+++.+.+..|+
T Consensus 103 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 161 (394)
T PRK11652 103 SAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW 161 (394)
T ss_pred HHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 45555554444455 66778888889999999999999999999999999999886653
No 181
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.14 E-value=1.9e-10 Score=108.70 Aligned_cols=135 Identities=10% Similarity=-0.024 Sum_probs=101.4
Q ss_pred cceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc-CCCceehHHHHHHHHHHHHHhHhhhcccccccCcCc
Q 015348 222 TGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKS-VSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPD 300 (408)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (408)
......|.++++|++..+.++..........+..++.|+++|| +|+|+.+..+.++..+..+...+ . .+
T Consensus 34 ~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~---------~-~~ 103 (489)
T PRK10207 34 QGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGM---------S-LL 103 (489)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHH---------h-cc
Confidence 3344445666789999998888877777777778899999999 99999999998888777554322 0 01
Q ss_pred eEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 301 SLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPG--CEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~--~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
....+.......+++.+...|. .+++.|..|++ +|++.+++.....++|..+||.++|++.++.|+
T Consensus 104 ~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 104 KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 1111223445556666666666 88999999877 457889999999999999999999999998763
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.14 E-value=6.6e-10 Score=104.90 Aligned_cols=150 Identities=23% Similarity=0.256 Sum_probs=132.1
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
++++.++++|.++...|++.+...++.++ ..+.+.+.+| .++++.+..+.+..+++.+.+++.+ +.+...
T Consensus 241 lPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-----~~~~~lv~~~~~~~a~~~~~lal~~----~~~~~~ 311 (524)
T PF05977_consen 241 LPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-----LSSRRLVLLASLLFALALLLLALSP----SFWLAL 311 (524)
T ss_pred hhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cCcchhhHHHHHHHHHHHHHHhcch----HHHHHH
Confidence 35677889999999999999999988888 7788889888 8888899999999999999999988 999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
+..++.|++.....+..++.+-+..|++ .|||.++++......+..+|..+.|.+.+..|.+..+.+.++.
T Consensus 312 ~~l~l~G~~~~~~~~~~~t~~Q~~~P~~---------~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~ 382 (524)
T PF05977_consen 312 IALFLAGAAWIIANSSLNTLVQLSVPDW---------VRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAA 382 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHH---------HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999999999999988888888888876 4999999999999999999999999999999999999888776
Q ss_pred HHHHHHHhh
Q 015348 162 VVLQFFITI 170 (408)
Q Consensus 162 ~~~~~~~~~ 170 (408)
.++..++..
T Consensus 383 lll~~~~~~ 391 (524)
T PF05977_consen 383 LLLSALIAL 391 (524)
T ss_pred HHHHHHHHH
Confidence 666555443
No 183
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.13 E-value=1.6e-10 Score=108.14 Aligned_cols=128 Identities=14% Similarity=0.105 Sum_probs=102.3
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
...+++|.++.+.++......++..++.++.|++.||+|+|+.+..+.+...+....... ....+.+..
T Consensus 43 ~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-----------~~~~~~l~~ 111 (426)
T PRK12307 43 LIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL-----------ASGVIMLTL 111 (426)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-----------HhHHHHHHH
Confidence 345678999999999999999999999999999999999999998888777766544221 122234455
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..+..+++.+...+. ..++.|..|+++|+++.++......+|..+++.+.+.+.+..|+
T Consensus 112 ~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 112 SRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 556667776666666 78899999999999999999999999999999888888776553
No 184
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.12 E-value=1.1e-10 Score=110.89 Aligned_cols=248 Identities=18% Similarity=0.127 Sum_probs=186.2
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhcc------------
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQ------------ 72 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~------------ 72 (408)
-+.+.++++.++.|++.+.+-++..+ ..+..+..-| ..|-+++-+|.++.+++.+++++.+.
T Consensus 122 tiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-----~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 122 TIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-----GHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-----cCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 35678999999999998888887776 7788999999 88889999999999999998876532
Q ss_pred ------C---------------------------cc--hHH-HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhh
Q 015348 73 ------S---------------------------SI--SIF-TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKA 116 (408)
Q Consensus 73 ------~---------------------------~~--~~~-~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~ 116 (408)
. .. .++ .++.+.++.|+|.....+...+++=|.+++++
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~------ 270 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKN------ 270 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccC------
Confidence 0 00 133 45666799999999888888888877777653
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc------------------CC-hhhHHHHHHHHHHHHHHHhhhcccccc
Q 015348 117 QSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR------------------FS-PPSMFLFFGLLVVLQFFITIAVRESAL 177 (408)
Q Consensus 117 ~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~------------------~g-~~~~f~i~~~~~~~~~~~~~~~~e~~~ 177 (408)
-....++.+....+|.++|-++++++... .| |..-|++.+.+.++..+..+++|++.+
T Consensus 271 ---SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 271 ---SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred ---CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 78888999999999999999999988643 12 556677788887777777777765533
Q ss_pred cCCC-------------CC---c----chhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCCh
Q 015348 178 KLPK-------------SQ---S----NVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRS 237 (408)
Q Consensus 178 ~~~~-------------~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (408)
+..+ ++ + ..+.++..+.++++++||.+...++...+.......+.+..|=|+.+++|.++
T Consensus 348 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sa 427 (735)
T KOG3626|consen 348 KSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISA 427 (735)
T ss_pred cccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCH
Confidence 2110 00 0 12345666778888999998888877777566666677777888888899999
Q ss_pred hhHHHHHHH-HHHHHHHHHHHHHHhhccCCC
Q 015348 238 SVLGISKVF-GQAAMLLWGVIYNSGLKSVSP 267 (408)
Q Consensus 238 ~~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~ 267 (408)
..+.++... ...+..+|.++.|.+.+|+..
T Consensus 428 s~An~l~G~i~vp~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 428 SLANILTGSIGVPAAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred HHHHHHhhhhhhhhhhhhhhccceeeeeecc
Confidence 998877644 445566788889999998763
No 185
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.12 E-value=5e-10 Score=103.49 Aligned_cols=145 Identities=16% Similarity=0.138 Sum_probs=108.4
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHH-HH-HHHhccCcchHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSW-LA-IAILSQSSISIFT 79 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 79 (408)
++.|+++++|.++.+.+...+...+...+ .++.|+++|| +|||+.+.....+..+.. .. ..... ..+.+.
T Consensus 242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-----~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 314 (394)
T TIGR00883 242 LPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-----IGRRPVLIIFTVLAALLAVPLLMALLD--SGSFTL 314 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hchHHHHHHHHHHHHHHHHHHHHHHhc--CCchHH
Confidence 35677788999999999988887765555 8999999999 999997775544443332 22 22221 125666
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHH-HHHHHHHHHHHHHHHHHHhhcCC-hhhHHHH
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFV-WMSSSMGGVLGNLLVGFAIDRFS-PPSMFLF 157 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~g~~ig~~l~~~l~~~~g-~~~~f~i 157 (408)
......+.+++.+...+...+++.|..|+++ |++.++.. +....+|..++|.++|.+.++.| |+..++.
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 315 FFFLVLGLALIGGMYTGPMGSFLPELFPTEV---------RYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCccc---------eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 7777888899988888888899999999764 77777763 45567889999999999999988 8887776
Q ss_pred HHHHHH
Q 015348 158 FGLLVV 163 (408)
Q Consensus 158 ~~~~~~ 163 (408)
.....+
T Consensus 386 ~~~~~l 391 (394)
T TIGR00883 386 LAALAL 391 (394)
T ss_pred HHHHHH
Confidence 655443
No 186
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.12 E-value=9.3e-11 Score=110.31 Aligned_cols=146 Identities=12% Similarity=0.136 Sum_probs=113.2
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHH--HHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYI--AIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
.|+ ++.|.++.+.+++.+...+..++ +++.|.++||.+ +++|+.. ..+.+..+++.+++...+ +++.++
T Consensus 266 ~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~---~~~~~~~~~~~~~~~~~l~~ll~~~~~----~~~~~~ 337 (455)
T TIGR00892 266 PYA-KDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKW---IRPHVQYLFSFALLFNGLTHLLCALAG----DYTGLV 337 (455)
T ss_pred HHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cCHHHHHHHHHHHHHHHHHHHHHHHhc----hHHHHH
Confidence 445 45799999999999988866555 899999999811 2333322 233333444445555566 788888
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcC-ChhhHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRF-SPPSMFLFFGL 160 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~-g~~~~f~i~~~ 160 (408)
+.+++.|++.+...+...+++.|..|++ ++++.+++.+...++|..+||.++|.+.+.. +|+..|++.++
T Consensus 338 i~~~~~G~~~g~~~~~~~~~~~~~~~~~---------~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~ 408 (455)
T TIGR00892 338 IYCIFFGLSFGSVGALLFEVLMDLVGAQ---------RFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGS 408 (455)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHhhHH---------HHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhH
Confidence 8999999999998888889999998875 3899999999999999999999999999887 59999999888
Q ss_pred HHHHHHH
Q 015348 161 LVVLQFF 167 (408)
Q Consensus 161 ~~~~~~~ 167 (408)
..++..+
T Consensus 409 ~~li~~~ 415 (455)
T TIGR00892 409 IVVSAGL 415 (455)
T ss_pred HHHHHHH
Confidence 7666544
No 187
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=1.4e-10 Score=100.59 Aligned_cols=117 Identities=14% Similarity=0.115 Sum_probs=98.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHH
Q 015348 235 IRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVM 314 (408)
Q Consensus 235 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
-+....|++.+...++..+.++.+|.++||+|||.++..|.+..++..+. ++.+.+...++..-+..|+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll-----------~~~S~~F~afv~aR~l~Gi 133 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLL-----------WALSRNFAAFVLARFLGGI 133 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHhhhh
Confidence 34566788999999999999999999999999999999998888776555 4444443233344566777
Q ss_pred HHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 315 FFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 315 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
..+...++.++++|+.++++|+..++..+...++|..+||.++|++.+
T Consensus 134 ~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 134 FKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 777777889999999999999999999999999999999999999998
No 188
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.10 E-value=1.1e-09 Score=103.25 Aligned_cols=153 Identities=13% Similarity=0.074 Sum_probs=100.9
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCC--cchhHH-HHHHHHHHHHHHHHHHhccCcchHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQ--HRVPYI-AIGAFLQAVSWLAIAILSQSSISIF 78 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~--grk~~l-~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (408)
++.|++++.|.++.+.+.......+..++ .++.|+++|| . +||+.. .....+..++.+.....+ ..+.+
T Consensus 276 ~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-----~~~~r~~~~~~~~~~l~~~~~~~~~~~~--~~~~~ 348 (452)
T PRK11273 276 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-----VFRGNRGATGVFFMTLVTIATIVYWLNP--AGNPT 348 (452)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HccCCcchHHHHHHHHHHHHHHHHHHhc--ccChH
Confidence 45678888999999999888877766665 8899999999 6 444432 222223333333322222 11344
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHH-HHHHHHHHHhhcCChhhHHHH
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGV-LGNLLVGFAIDRFSPPSMFLF 157 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~~l~~~l~~~~g~~~~f~i 157 (408)
...+..++.|.+..........+..|..|++ .||+..++.+....+|.. ++|.+.|.+.++.||+..|++
T Consensus 349 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~---------~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~ 419 (452)
T PRK11273 349 VDMACMIVIGFLIYGPVMLIGLHALELAPKK---------AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMV 419 (452)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcChh---------hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHH
Confidence 3444444444433222222335567888775 499999999888888765 479999999999999999998
Q ss_pred HHHHHHHHHHHhhh
Q 015348 158 FGLLVVLQFFITIA 171 (408)
Q Consensus 158 ~~~~~~~~~~~~~~ 171 (408)
.+..+++..+....
T Consensus 420 ~~~~~~~~~~~~~~ 433 (452)
T PRK11273 420 MIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877777655443
No 189
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.10 E-value=4.5e-10 Score=104.74 Aligned_cols=136 Identities=11% Similarity=-0.039 Sum_probs=98.3
Q ss_pred ccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC-CCceehHHHHHHHHHHHHHhHhhhcccccccCcC
Q 015348 221 LTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSV-SPRKLISAIQAMMAVFMISDVLFVKGVYREMGVP 299 (408)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (408)
.....+.|..+.+|+++.+.+...........++.++.|+++||+ |+|+.+..+.++..+....... . .
T Consensus 28 ~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~---------~-~ 97 (493)
T PRK15462 28 MRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA---------S-E 97 (493)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH---------h-h
Confidence 334455556666899999999999888899999999999999999 9999988887777666433110 0 0
Q ss_pred ceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 300 DSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPG--CEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~--~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..............++.+...|. .+++.|..|++ +|.+.+++.....++|+.++|.+.|++.+..|+
T Consensus 98 ~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw 167 (493)
T PRK15462 98 IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSW 167 (493)
T ss_pred cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhCh
Confidence 00001122222223333444454 77889999875 799999999999999999999999999987664
No 190
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.09 E-value=1.2e-10 Score=106.93 Aligned_cols=128 Identities=13% Similarity=0.052 Sum_probs=100.5
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
+..+++|.+..+.|++.+...++..++.++.|++.||+|+|+.+..+..+..+..++... ....+.+..
T Consensus 20 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 88 (379)
T TIGR00881 20 YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF-----------STSLWVMAA 88 (379)
T ss_pred HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH-----------hhhHHHHHH
Confidence 355678999999999999999999999999999999999999998887776666544221 122334445
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCC
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSG-YLGVALASYTGV 366 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~-~~~g~l~~~~g~ 366 (408)
..+..+++.+...|. .+++.|..|+++|++..++.+...++|..+++ .+++.+.+..+.
T Consensus 89 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (379)
T TIGR00881 89 LWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW 149 (379)
T ss_pred HHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence 556666666655666 88999999999999999999999999999999 566666665443
No 191
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.08 E-value=1.4e-09 Score=100.79 Aligned_cols=129 Identities=9% Similarity=-0.073 Sum_probs=101.3
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
+..++++|.+..+.|++.+...++..++.+..+++.||+|+|+.+..+..+.++....... ....++++.+.
T Consensus 27 ~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~--------~~~~~~~~~~l 98 (410)
T TIGR00885 27 PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWP--------AAEIMNYTLFL 98 (410)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH--------HHhhccHHHHH
Confidence 3457779999999999999999999999999999999999999999888877776544211 00112233444
Q ss_pred hhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 307 FSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
...+..+++.+...+. +.++.+..|++++++..++.+...++|..++|.+++.+...
T Consensus 99 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 99 VGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5556666766555555 77888999999999999999999999999999999988643
No 192
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.08 E-value=1.6e-09 Score=100.08 Aligned_cols=155 Identities=17% Similarity=0.121 Sum_probs=113.9
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
+.|++ +.|.|+.+.|...+...+..++ .++.|++.|| .+||+.+..+..+..++..++...+. +....
T Consensus 229 p~~l~-~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-----~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~-- 297 (393)
T PRK09705 229 PAFYI-EIGASAQYSGSLLALMTLGQAAGALLMPAMARH-----QDRRKLLMLALVLQLVGFCGFIWLPL---QLPVL-- 297 (393)
T ss_pred HHHHH-HcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-----ccchHHHHHHHHHHHHHHHHHHHccc---hHHHH--
Confidence 45665 4799999999999988877666 8999999999 99999988887777776665544331 22222
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhhHHHHHHHH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-PPSMFLFFGLL 161 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-~~~~f~i~~~~ 161 (408)
...+.|++.+...+...+...+..++++ ++++..+..+....++..++|.+.|++.+..| |+..|.+.+..
T Consensus 298 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~--------~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~ 369 (393)
T PRK09705 298 WAMVCGLGLGGAFPLCLLLALDHSVQPA--------IAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALC 369 (393)
T ss_pred HHHHHHHhccchHHHHHHHHHhhcCCHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 2345577777666666566666665433 58999999999999999999999999999876 77788887777
Q ss_pred HHHHHHHhh-hcccccc
Q 015348 162 VVLQFFITI-AVRESAL 177 (408)
Q Consensus 162 ~~~~~~~~~-~~~e~~~ 177 (408)
+++...... +.||++.
T Consensus 370 ~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 370 VVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHhcccccc
Confidence 666655433 3555543
No 193
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.08 E-value=3.9e-10 Score=109.65 Aligned_cols=138 Identities=14% Similarity=0.017 Sum_probs=107.1
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhh---cccccc--------
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFV---KGVYRE-------- 295 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------- 295 (408)
+-..++++++..+.|++.+...++..++.++.+++.||.++|+.+.++.++.++..++..+-. ......
T Consensus 57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~ 136 (633)
T TIGR00805 57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGN 136 (633)
T ss_pred hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccc
Confidence 345566899999999999999999999999999999999999999998888877755432210 000000
Q ss_pred -------c---C-----------------c--CceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHH
Q 015348 296 -------M---G-----------------V--PDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSA 345 (408)
Q Consensus 296 -------~---~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~ 345 (408)
. . . ...+..+++..++.|++.....+. .+++.|..|+++++.+.|+.+..
T Consensus 137 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~ 216 (633)
T TIGR00805 137 LSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESI 216 (633)
T ss_pred ccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHH
Confidence 0 0 0 012334556777888888777777 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 015348 346 VALAFIVSGYLGVALASYT 364 (408)
Q Consensus 346 ~~lg~~ig~~~~g~l~~~~ 364 (408)
..+|..+|+.++|.+.+..
T Consensus 217 ~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 217 AVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred HHhhhHHHHHHHHHHHhcc
Confidence 9999999999999998764
No 194
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.07 E-value=6.6e-10 Score=97.03 Aligned_cols=126 Identities=17% Similarity=0.168 Sum_probs=108.3
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHH
Q 015348 233 LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLE 312 (408)
Q Consensus 233 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
.+-+..+.|++.+..++..++.+++.|.+.||+|+|..+.++..++....++ +++.+.+.++++.-...
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTil-----------Fafg~sy~~l~vAR~LQ 169 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTIL-----------FAFGNSYPMLFVARSLQ 169 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHH-----------HHHcchhHHHHHHHHHh
Confidence 4556788999999999999999999999999999999999998888777665 33446666778888889
Q ss_pred HHHHHhhhhH-HHHHHHhcCCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 015348 313 VMFFFKILPF-SVYIAQVCPPGC-EGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGD 369 (408)
Q Consensus 313 ~~~~~~~~~~-~~~~~~~~p~~~-~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~ 369 (408)
+++....... .+++++..|++. ||+++|+.-.+.++|-.+||..+|.+.|..|....
T Consensus 170 gvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aP 228 (464)
T KOG3764|consen 170 GVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAP 228 (464)
T ss_pred hhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCc
Confidence 9988766666 889999988865 69999999999999999999999999999997654
No 195
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.07 E-value=3.2e-09 Score=99.23 Aligned_cols=161 Identities=16% Similarity=0.163 Sum_probs=130.2
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcch--hHHHHHHHHHHHHHHHHHH--hc--cCcch
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRV--PYIAIGAFLQAVSWLAIAI--LS--QSSIS 76 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk--~~l~~~~~~~~~~~~~~~~--~~--~~~~~ 76 (408)
..|.++++|+|..+...+.-+..+..+. ..++|++.|| +|.| ++++.+.+...+..+.-.+ .+ ....+
T Consensus 305 ~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-----~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~ 379 (477)
T PF11700_consen 305 GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-----FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKS 379 (477)
T ss_pred HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCccc
Confidence 4567789999999988887777766666 8899999999 8888 8888777666444433333 11 11237
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhhHH
Q 015348 77 IFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-PPSMF 155 (408)
Q Consensus 77 ~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-~~~~f 155 (408)
.+.+.+.-++.|+..|..++...++..++.|+++ .+..++++....-....+||.+.|.+.+..| -|..+
T Consensus 380 ~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~---------e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~ 450 (477)
T PF11700_consen 380 PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR---------EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGF 450 (477)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 8889999999999999999999999999999875 7999999999999999999999999999877 88888
Q ss_pred HHHHHHHHHHHHHhhhccccccc
Q 015348 156 LFFGLLVVLQFFITIAVRESALK 178 (408)
Q Consensus 156 ~i~~~~~~~~~~~~~~~~e~~~~ 178 (408)
....++.++.+++.+++++++..
T Consensus 451 ~~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 451 LFLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred HHHHHHHHHHHHHHhhccchhhh
Confidence 88888888887777777766543
No 196
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.06 E-value=1.9e-09 Score=101.22 Aligned_cols=137 Identities=18% Similarity=0.217 Sum_probs=105.7
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
+|.++.++ ++.+.+.+.+...++.++ .+++|+++|| +|||+.+..+.++..++.+...+.+ .+.+..++.
T Consensus 247 ~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-----~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 317 (437)
T TIGR00792 247 YYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK-----FGRKILFAGGILLMVLGYLIFFFAG---SNLPLILVL 317 (437)
T ss_pred eeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHHHcc---hhHHHHHHH
Confidence 45555556 566777777766666555 8899999999 9999999999888887777666543 256667778
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChh
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPP 152 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~ 152 (408)
.++.|++.+...+...+++.|..+.++. +..++.+|...+..+....+|..+++.+.|.+.+..||.
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 318 IILAGFGQNFVTGLVWALVADTVDYGEW--KTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhh--hcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8889999999988888999998775421 111125799999999999999999999999998877763
No 197
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.05 E-value=4.9e-09 Score=97.25 Aligned_cols=154 Identities=17% Similarity=0.217 Sum_probs=103.8
Q ss_pred hhhhhccCCCHHHHHHHHHhhc-ccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHH---HHhccCcchHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSAN-LPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAI---AILSQSSISIFT 79 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~-~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~ 79 (408)
+++.+++|.++++.+++.+... ...++ .+++|++.|| +|||+.+..+.....+..+.. +..+ ++.+.
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-----~g~~~~l~~~~~~~~l~~l~~~~~~~~~---~~~~~ 305 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-----LGLYRSLMLFGVLQAVSNLGYWVLAVTP---KHLWT 305 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHHHHHhcC---CcHHH
Confidence 4566789999999999986654 34444 7899999999 999988877766655554333 2332 15566
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHH
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFG 159 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~ 159 (408)
+.+..++.++..+.......+......+++. .++..+..+...++|..+++.++|.+.+..||+..|.+.+
T Consensus 306 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~ 376 (402)
T PRK11902 306 MALAIGIENLCGGMGTAAFVALLMALCNRSF---------SATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTV 376 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 6665555555555554444444455554432 2223455555667888877779999999999999999998
Q ss_pred HHHHHHHHHhhhcccc
Q 015348 160 LLVVLQFFITIAVRES 175 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~ 175 (408)
.++++..+.....+.+
T Consensus 377 ~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 377 VIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 8888776665554443
No 198
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.05 E-value=4e-09 Score=99.89 Aligned_cols=127 Identities=12% Similarity=0.055 Sum_probs=102.6
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHH
Q 015348 232 NLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLL 311 (408)
Q Consensus 232 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
+++++..+.|.+.....++..++.++.|++.||+|+|+.+..+.++..+..++... ........++...+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPW---------AAGGGIALVVFCRVI 140 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHH---------HHHcCchHHHHHHHH
Confidence 57889999999999999999999999999999999999988887766655443211 011122345556677
Q ss_pred HHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Q 015348 312 EVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYT-GVT 367 (408)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~-g~~ 367 (408)
.|++.+...|. ..++.|..|+++|+++.|+.+...++|..+++.+.+.+.+.. |..
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~ 198 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWP 198 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 78887777777 889999999999999999999999999999999999998873 654
No 199
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.04 E-value=1.2e-09 Score=103.80 Aligned_cols=158 Identities=9% Similarity=-0.093 Sum_probs=107.3
Q ss_pred cccc-hhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc-CCCceehHHHHH
Q 015348 199 LRKP-EIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKS-VSPRKLISAIQA 276 (408)
Q Consensus 199 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 276 (408)
+|+| .++..+...+.............+.|..+++|++..+.+...............+.|++.|| +|+|+.+..+.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 4555 35555555555444444455566677778899999888777666555555556789999999 599999988877
Q ss_pred HHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCch--hHHHHHHHHHHHHHHHHHH
Q 015348 277 MMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGC--EGSIMAFVMSAVALAFIVS 353 (408)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~--~g~~~g~~~~~~~lg~~ig 353 (408)
+..+......+ .++....+.......+++.+...|. .+++.+..|+++ ++..+++.+...++|..+|
T Consensus 97 ~~~ig~~l~~~----------~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~g 166 (500)
T PRK09584 97 VLAIGYALVAW----------SGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFS 166 (500)
T ss_pred HHHHHHHHHHH----------hcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHH
Confidence 77665443211 0011112333344556665555555 778899987643 4567888899999999999
Q ss_pred HHHHHHHHHhcCC
Q 015348 354 GYLGVALASYTGV 366 (408)
Q Consensus 354 ~~~~g~l~~~~g~ 366 (408)
|.++|++.+..|+
T Consensus 167 p~i~g~l~~~~g~ 179 (500)
T PRK09584 167 MLATPWLAAKYGW 179 (500)
T ss_pred HHHHHHHHHhhCH
Confidence 9999999998764
No 200
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.03 E-value=2.8e-09 Score=101.44 Aligned_cols=166 Identities=14% Similarity=0.180 Sum_probs=108.3
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcC--ceEeehhhhHH
Q 015348 233 LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVP--DSLYVLIFSSL 310 (408)
Q Consensus 233 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 310 (408)
.+.+..+.++..+...++.+++.++.|++.||+|||+.+..+..+..+..+........... ...+ ..+..++..-+
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~R~ 128 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS-IGPDNTGYVPEFVIYRI 128 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc-ccccchhHHHHHHHHHH
Confidence 57888999999999999999999999999999999999988877766554332210000000 0000 11123345556
Q ss_pred HHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhhhhh
Q 015348 311 LEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCTILPL 389 (408)
Q Consensus 311 ~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 389 (408)
..|++.+...|. .+++.|..|+++||++.++.+....+|..+++.+++.+.+..+.......++...+.+.++..++..
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 777777777777 8899999999999999999999999999998877766654221111111123333444333333333
Q ss_pred hhhhccCCCC
Q 015348 390 YWSYFMPDGV 399 (408)
Q Consensus 390 ~~~~~~~~~~ 399 (408)
...+.+||+.
T Consensus 209 ~~~~~l~~s~ 218 (479)
T PRK10077 209 MLLYFVPETP 218 (479)
T ss_pred HHHHcCCCCc
Confidence 3445566653
No 201
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.01 E-value=7.2e-09 Score=95.47 Aligned_cols=142 Identities=13% Similarity=0.148 Sum_probs=112.4
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
.|+ +|.|.|+.+.|.+.+...+..+. .++.|++.|| +++|+.+..+.+...++.+.....+ +++.+++.
T Consensus 230 ~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-----~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~ 299 (382)
T PRK11128 230 IYW-QAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-----WSARDLLLLSAICGVVRWGLMGSTT----ALPWLIVI 299 (382)
T ss_pred HHH-HHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHH
Confidence 455 56899999999998877665555 7889999999 9999999999888888887777777 88888889
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHH-HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVW-MSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLV 162 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~ 162 (408)
.++.|++.+...+....++.+. +++ ++++.++..+ ...++|..+||.++|.+.+..|+ ..++..+.+.
T Consensus 300 ~~l~g~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~ 368 (382)
T PRK11128 300 QILHCGTFTVCHLAAMRYIAAR-PGS---------EVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVA 368 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CHh---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHH
Confidence 9999999998888777776664 322 3677888775 55677889999999999999987 4666666665
Q ss_pred HHHHH
Q 015348 163 VLQFF 167 (408)
Q Consensus 163 ~~~~~ 167 (408)
++.++
T Consensus 369 ~~~~~ 373 (382)
T PRK11128 369 LPALF 373 (382)
T ss_pred HHHHH
Confidence 54433
No 202
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.01 E-value=1.6e-09 Score=102.89 Aligned_cols=155 Identities=17% Similarity=0.132 Sum_probs=109.9
Q ss_pred hhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh---ccCcc---hHHHH
Q 015348 8 KDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL---SQSSI---SIFTM 80 (408)
Q Consensus 8 ~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~---~~~~~---~~~~~ 80 (408)
.+++|.+..+.+.......+..++ .++.|+++|| .+||+.+..+.++..++.+.+.+. ..... ..+..
T Consensus 311 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (481)
T TIGR00879 311 FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-----FGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVA 385 (481)
T ss_pred HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Confidence 367888888888877777755554 8899999999 999999988887777776666521 11100 02222
Q ss_pred HHHHHHHHHHHHH-HHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHH
Q 015348 81 SLFLLLSNLGASI-AEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFG 159 (408)
Q Consensus 81 ~~~~~l~g~~~~~-~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~ 159 (408)
+....+.+.+.+. ..+....++.|..|++ +|++.++..+...++|.+++|.+.+.+.++.+|++.|++.+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---------~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~ 456 (481)
T TIGR00879 386 IVFILLFIAFFAMGWGPVPWVIVSEIFPLS---------LRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFG 456 (481)
T ss_pred HHHHHHHHHHHHccccCeehhhhhccCChH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHH
Confidence 2222222222222 2344446668888865 39999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhhh-ccccc
Q 015348 160 LLVVLQFFITIA-VRESA 176 (408)
Q Consensus 160 ~~~~~~~~~~~~-~~e~~ 176 (408)
+++++..+..++ .||++
T Consensus 457 ~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 457 GLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHheecccCC
Confidence 888777666554 66654
No 203
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.01 E-value=2e-09 Score=97.85 Aligned_cols=127 Identities=15% Similarity=0.092 Sum_probs=105.8
Q ss_pred EEEeccCCChhh-HHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 228 YQTQNLKIRSSV-LGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 228 ~~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
++.+++|++.++ .|.+......+..+..+..|++.||+|.|+.+..+.+.-.+..++..+ ......+.
T Consensus 51 ~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f-----------a~Sl~~L~ 119 (511)
T TIGR00806 51 YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL-----------GTSVWHMQ 119 (511)
T ss_pred HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-----------HHHHHHHH
Confidence 456689999999 999999999999999999999999999999998888777776555332 12334566
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 307 FSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
+.-+..|++++.......++.+.+|+++|+++.|+.++...+|..+++.++++ ...+|.
T Consensus 120 i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gW 178 (511)
T TIGR00806 120 LMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGW 178 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCc
Confidence 67788888887777558999999999999999999999999999999999999 445554
No 204
>PRK10133 L-fucose transporter; Provisional
Probab=99.00 E-value=3.3e-09 Score=99.25 Aligned_cols=127 Identities=8% Similarity=-0.047 Sum_probs=98.7
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
+..++++|.|+.+.|+......++..++.+..|++.||+|+|+.+..+..+..+..+.... ....+++..+.
T Consensus 50 p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~--------~~~a~~~~~ll 121 (438)
T PRK10133 50 PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWP--------AAEIMNYTLFL 121 (438)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--------HHhcCCHHHHH
Confidence 3357789999999999999999999999999999999999999999988887776544211 01123333555
Q ss_pred hhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 307 FSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
...+..+++.+...+. +.++.+..|+++++...++.+....+|..+++.+++.+.
T Consensus 122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777776655555 777788777676667899999999999999999988765
No 205
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.00 E-value=8.5e-09 Score=95.29 Aligned_cols=151 Identities=15% Similarity=0.073 Sum_probs=109.8
Q ss_pred hhhhhhccCCCHHHHHHHHHhhc-ccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhc--cCcchHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSAN-LPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILS--QSSISIFT 79 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~-~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~ 79 (408)
+.|++ |.|.|++++|++..... ...++ .++.|++.|| +|+|+.+..+........+...... ....+.+.
T Consensus 232 ~~~l~-~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-----~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (390)
T TIGR02718 232 KLYLV-DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-----AGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAV 305 (390)
T ss_pred hHHHH-hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHH
Confidence 45664 58999999999988765 34445 6789999999 9999998877665533322222111 00113444
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHH
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFG 159 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~ 159 (408)
......+.+++.+...+...+...+..++++ .+++.++..+...++|..+||.++|.+.+..|++..|...+
T Consensus 306 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~ 377 (390)
T TIGR02718 306 AWSCSAFGSLITGITSVAIYTAFMRFAGDGD--------QAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGT 377 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 4455566677777777777777777766533 58999999999999999999999999999999999999888
Q ss_pred HHHHHHHHH
Q 015348 160 LLVVLQFFI 168 (408)
Q Consensus 160 ~~~~~~~~~ 168 (408)
.+.++..+.
T Consensus 378 ~~~l~a~~~ 386 (390)
T TIGR02718 378 VLAVLAILL 386 (390)
T ss_pred HHHHHHHHH
Confidence 776665443
No 206
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.99 E-value=2.1e-09 Score=113.21 Aligned_cols=119 Identities=11% Similarity=-0.032 Sum_probs=92.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHH
Q 015348 237 SSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFF 316 (408)
Q Consensus 237 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
....++..++..++.+++.++.|+++||+|+|+++..+.++..+..++..+.. .....+.+.+..++.+++.
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~r~l~G~~~ 117 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAY--------YLGWFWLAFAVTFLLGAQS 117 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHH--------HHccHHHHHHHHHHHHHHH
Confidence 34567888888899999999999999999999998877665544433322100 1122334555566677777
Q ss_pred HhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 317 FKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 317 ~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
+...|. .+++.+.+|+++|++++|+.+...++|..+|+.+++++.+.
T Consensus 118 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 118 AIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777 88999999999999999999999999999999999999876
No 207
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.99 E-value=7.2e-09 Score=96.00 Aligned_cols=148 Identities=10% Similarity=0.110 Sum_probs=111.2
Q ss_pred hhhhhhcc---CCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHH
Q 015348 4 NFFLKDSL---NVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFT 79 (408)
Q Consensus 4 ~~~l~~~l---~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (408)
+.|+++++ +.+..+.|.+.+...+.... .++.|++.|| .|||+.+.++..+.++...+....+ +.+.
T Consensus 239 ~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-----~g~~~~l~~~~~l~~l~~~~~~~~~----~~~~ 309 (396)
T TIGR00882 239 ANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-----IGAKNALLIAGTIMSVRIIGSSFAT----TALE 309 (396)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hccchhHHHHHHHHHHHHHHHHhcC----ChHH
Confidence 34555554 55667788888877655444 7888999999 9999999998888888777766666 8888
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHH-HHHHHHHHHHHHHHHHHHHhhcCChhhHHHHH
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSF-VWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFF 158 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~ 158 (408)
+++..++.|++..........+..+..+++ .++...+. .+....+|..+++.++|++.+..||+..|.+.
T Consensus 310 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---------~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~ 380 (396)
T TIGR00882 310 VVILKMLHAFEVPFLLVGCFKYITSQFDVR---------LSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVL 380 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcc---------eEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHH
Confidence 888888888887665444434444444432 35555554 56788999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 015348 159 GLLVVLQFFIT 169 (408)
Q Consensus 159 ~~~~~~~~~~~ 169 (408)
+++.++..+..
T Consensus 381 ~~~~~i~~~~~ 391 (396)
T TIGR00882 381 GCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHH
Confidence 88887776554
No 208
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.98 E-value=2.4e-09 Score=83.26 Aligned_cols=109 Identities=17% Similarity=0.191 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HH
Q 015348 246 FGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SV 324 (408)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 324 (408)
...++.+++.+..+++.||+++|+.+..+.....+..+.... ..+.+......+..+++.....+. ..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL-----------SSNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-----------hccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 446778888999999999999999887776666555433211 112223334445556665555566 78
Q ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 325 YIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 325 ~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
+..|..|+++|++..++.+...+++..+++.+.+.+.+..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 115 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG 115 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc
Confidence 89999999999999999999999999999999999987654
No 209
>PRK09848 glucuronide transporter; Provisional
Probab=98.98 E-value=3.8e-09 Score=99.46 Aligned_cols=139 Identities=17% Similarity=0.146 Sum_probs=106.2
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
++|+++.+|.++...++......+..++ .+++++++|| +|+|+.+.++.++..++.+.+.+.+ ..+.+.++.
T Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-----~g~~~~~~~g~~~~~i~~~~~~~~~--~~~~~~~~~ 324 (448)
T PRK09848 252 LFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-----IGKKNTFLIGALLGTCGYLLFFWVS--VWSLPVALV 324 (448)
T ss_pred eeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHHHHHHHHHcC--chhHHHHHH
Confidence 4677778888776655544443444444 8899999999 9999999999888888777766543 225677777
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSP 151 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~ 151 (408)
..++.|+|.+...+...++..|..|+++ .|..++++|..++..+....+|..+|+.+.+.+.+..|+
T Consensus 325 ~~~l~g~G~~~~~~~~~al~~~~~~~~~--~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 325 ALAIASIGQGVTMTVMWALEADTVEYGE--YLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhH--HhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7888999999999999999999887653 111112468899999999999999999999988876665
No 210
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.97 E-value=2.3e-09 Score=112.68 Aligned_cols=121 Identities=8% Similarity=0.007 Sum_probs=90.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
...++..+...+..++..++.|+++||+++|+++................. . ...+++.++...++.+++..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~-------~-~~~s~~~l~~~~~l~gi~~a 123 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYG-------F-HLNSVPLLFAALFLMGIHSA 123 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHH-------H-HHhhHHHHHHHHHHHHHHHH
Confidence 456777888889999999999999999999987643222222221111110 0 01233456666777788887
Q ss_pred hhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 318 KILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
...|. .+++.+..|++++++++|+.++..++|..+||.++|++.+..|.
T Consensus 124 ~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~ 173 (1140)
T PRK06814 124 LFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNF 173 (1140)
T ss_pred hhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 78888 99999999999999999999999999999999999999987653
No 211
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.95 E-value=2.3e-08 Score=93.70 Aligned_cols=156 Identities=15% Similarity=0.162 Sum_probs=95.7
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHH-hccCcchHHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAI-LSQSSISIFTMS 81 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 81 (408)
+.|+++++|.+..+.+...++......+ +++.|+++|| .+||+.+..+.++..+....... ... ..+....+
T Consensus 267 p~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-----~grr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 340 (432)
T PRK10406 267 QKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-----IGRRTSMLCFGSLAALFTVPILSALQN-VSSPYAAF 340 (432)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCchHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHH
Confidence 4567778899999998888776644444 8899999999 99998877765544333322211 110 11233222
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHH-HHHHHHHHHHHHhhcCC-hhhHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSM-GGVLGNLLVGFAIDRFS-PPSMFLFFG 159 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~l~~~l~~~~g-~~~~f~i~~ 159 (408)
....+..+..+.......++..|.+|++. |++..++.+...++ .....|.+.+.+ +..| |...++..+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~---------r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~ 410 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQV---------RALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVT 410 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCc---------cchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHH
Confidence 22233334444444455678899999864 99999988766554 234477777755 4445 555666666
Q ss_pred HHHHHHHHHhhhcccc
Q 015348 160 LLVVLQFFITIAVRES 175 (408)
Q Consensus 160 ~~~~~~~~~~~~~~e~ 175 (408)
+..++..+..++++++
T Consensus 411 ~~~~i~~~~~~~l~~~ 426 (432)
T PRK10406 411 LMAVVAFLVSLMLHRK 426 (432)
T ss_pred HHHHHHHHHHHHhhhc
Confidence 6666665555555443
No 212
>PRK15075 citrate-proton symporter; Provisional
Probab=98.94 E-value=1.7e-08 Score=94.72 Aligned_cols=135 Identities=16% Similarity=0.079 Sum_probs=91.9
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHH-HHHHhccCcchHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWL-AIAILSQSSISIFTM 80 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 80 (408)
.+.|+++++|.++.+.++......+..++ .+++|+++|| +|||+.+..+.....+... ....... ..+....
T Consensus 261 ~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-----~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 334 (434)
T PRK15075 261 TPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-----IGRRPVLIAFTVLAILTAYPALSWLVA-APSFARM 334 (434)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHc-CCchHHH
Confidence 34567777899999988887777665555 8899999999 9999987776544332221 1111111 1144444
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHH-HHHHHHHHHHHHHhhcCChh
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSS-MGGVLGNLLVGFAIDRFSPP 152 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~g~~ig~~l~~~l~~~~g~~ 152 (408)
.....+.+++.+...+....++.|..|++. |++..++.+.... ++..++|.+.+++.+..|++
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~---------rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 335 LAVELWLSFLYGSYNGAMVVALTEVMPAEV---------RTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCCc---------cchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 444566667777777666688899998764 8888887544333 45777999999999988864
No 213
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.94 E-value=1.6e-07 Score=85.76 Aligned_cols=306 Identities=11% Similarity=0.041 Sum_probs=179.1
Q ss_pred cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCc
Q 015348 32 KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMT 111 (408)
Q Consensus 32 ~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~ 111 (408)
..+.+.+.|+ .+.|..++++........+...+. |-+.++..-.+.|+|.++.+...-.++.+..+++.
T Consensus 67 ~l~~psiv~~-----i~~K~~lv~ga~~y~~f~~gfl~~-----N~y~~yfssallG~Gaallw~GqG~ylt~~st~~t- 135 (461)
T KOG3098|consen 67 CLFAPSIVNF-----LGPKWALVIGATCYAAFPLGFLFP-----NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRET- 135 (461)
T ss_pred HHhhHHHHHH-----hhHHHHHHHHhHHHHHHHHHHHhc-----chHHHHHHHHHhhhhHHheecccceehhhcCChhh-
Confidence 6788899999 999999999988887766665554 56677888999999999988888888988888764
Q ss_pred cchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--------CChh-h----------HHHHHHHHHHHHHHH---h
Q 015348 112 SSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR--------FSPP-S----------MFLFFGLLVVLQFFI---T 169 (408)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~g~~-~----------~f~i~~~~~~~~~~~---~ 169 (408)
+.+..++.......+.++|...-..+... .+.+ . ...+.+++.....+. .
T Consensus 136 --------ie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~ 207 (461)
T KOG3098|consen 136 --------IERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINF 207 (461)
T ss_pred --------HHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhe
Confidence 77778888888888888776554333211 1111 0 111222222221111 1
Q ss_pred hhcccccccCCCCCcchhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEe--ccCC-ChhhHHHHHHH
Q 015348 170 IAVRESALKLPKSQSNVGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQ--NLKI-RSSVLGISKVF 246 (408)
Q Consensus 170 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~-~~~~~g~~~~~ 246 (408)
.+.|.+.....++..++..++.++...+.+++|+...+....+..+..........|....- ..+. +....++....
T Consensus 208 ~~~p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~ 287 (461)
T KOG3098|consen 208 DFLPSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIG 287 (461)
T ss_pred eecCccchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHH
Confidence 22333222111111113566777778888899988777766655444333333333322211 1222 33445556666
Q ss_pred HHHHHHHHHHHHHHhhcc---CCCceehHHHHHHHHHHHHHhHhhhc-ccccc------cCcCceEeehhhhHHHHHHHH
Q 015348 247 GQAAMLLWGVIYNSGLKS---VSPRKLISAIQAMMAVFMISDVLFVK-GVYRE------MGVPDSLYVLIFSSLLEVMFF 316 (408)
Q Consensus 247 ~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~ 316 (408)
.+++.+.+....+.+.|| +|+++.+..+..+.....++...-.. ..+.. .-.........+..+..|++.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 777788777777766654 67777777776665555444222111 11000 001112223444556677777
Q ss_pred HhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 015348 317 FKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLG 357 (408)
Q Consensus 317 ~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~ 357 (408)
..+... +..+.... +++|..++++.-.-..++..++-...
T Consensus 368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 666666 77777777 56777777777666666665544433
No 214
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.94 E-value=1.4e-08 Score=97.04 Aligned_cols=125 Identities=10% Similarity=0.084 Sum_probs=94.1
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHH
Q 015348 234 KIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEV 313 (408)
Q Consensus 234 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
+.+..+.+++.....++.+++.++.+++.||+|||+.+..+.++..+..+..... . + .........+....+..|
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~-~--~--~~~~~~~~~~~~~r~l~G 126 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLS-P--G--SSPKSVMATLCFWRFWLG 126 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-c--C--cccchHHHHHHHHHHHHH
Confidence 4566677889999999999999999999999999999888777666654442220 0 0 000001224555566677
Q ss_pred HHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 314 MFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 314 ~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
++.+...|. ..+++|..|++.||+..++.+....+|..+++.++..+...
T Consensus 127 ~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~ 177 (502)
T TIGR00887 127 VGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAG 177 (502)
T ss_pred HHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666666 89999999999999999999999999999999988877653
No 215
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.92 E-value=5.7e-08 Score=82.05 Aligned_cols=158 Identities=17% Similarity=0.140 Sum_probs=118.5
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC---cchHHHH
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS---SISIFTM 80 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 80 (408)
+-.+|+.+|.|.+|...+.+...++..+.++.|.+.|| +|.+.++.+|.+...++...+...-.. ..++|.+
T Consensus 25 S~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~-----~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~ 99 (250)
T PF06813_consen 25 SPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDR-----FGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLM 99 (250)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHH
Confidence 34588999999999999999988887789999999999 999999999999999999888765432 2468888
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
.+..++.+.+.+..+.+......+.+|+ +||++.++.-....++..+-..+...+.+...-+..+.+.-.
T Consensus 100 ~~~~~l~~~s~~~~~ta~lvt~~~NFP~----------~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~ 169 (250)
T PF06813_consen 100 CLFLFLGGNSSCWFNTASLVTCVRNFPR----------SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVL 169 (250)
T ss_pred HHHHHHHcccHHHhhhHHHHHHHHhCcc----------ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 8888888888888877765666677774 399999998888888887776666666555333333333333
Q ss_pred HHHHHHHHhhhccccc
Q 015348 161 LVVLQFFITIAVRESA 176 (408)
Q Consensus 161 ~~~~~~~~~~~~~e~~ 176 (408)
...+.++..+++++.+
T Consensus 170 ~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 170 PAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHHHhhheeccC
Confidence 3444444455555544
No 216
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1.5e-08 Score=84.62 Aligned_cols=149 Identities=15% Similarity=0.206 Sum_probs=110.8
Q ss_pred hhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHH-HHHHHHHHHHHHhccCcchHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGA-FLQAVSWLAIAILSQSSISIFTMSL 82 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (408)
.++++++|+|+.+.+.+.+... ++.+.+|+.|.++|| +||+-+.+.+. +...++.....++. +.=..
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk-----~G~n~~wv~~a~~~tl~~H~~l~Ft~------lsPy~ 357 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK-----YGFNLWWVASACILTLLGHSGLFFTF------LSPYT 357 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh-----hcceehhHHHHHHHHHHHhhhHHhhh------ccHHH
Confidence 4578999999999999888777 677779999999999 99998766554 44455555544433 23356
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC---hhhHHH-HH
Q 015348 83 FLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS---PPSMFL-FF 158 (408)
Q Consensus 83 ~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g---~~~~f~-i~ 158 (408)
...+.|+.++........+++...|+++ .|++.+..+...++|-.+-|+++|++.+..| |-..|. +.
T Consensus 358 ~m~~lGLsysllAcslWP~va~~vpE~q---------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 358 SMTFLGLSYSLLACSLWPCVASLVPEEQ---------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred HHHHHhhhHHHHHHHHhhhhhhhCCHHH---------hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHH
Confidence 7788899888887777788889999875 9999999999999999999999999998765 433443 33
Q ss_pred HHHHHHHHHHhhhcc
Q 015348 159 GLLVVLQFFITIAVR 173 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~ 173 (408)
+...+....+.+.+.
T Consensus 429 ~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 429 GLMALTSVGILFYLN 443 (459)
T ss_pred HHHHHHHHHHHhhee
Confidence 444444444444443
No 217
>TIGR00898 2A0119 cation transport protein.
Probab=98.92 E-value=1.2e-08 Score=97.74 Aligned_cols=124 Identities=10% Similarity=0.060 Sum_probs=98.3
Q ss_pred EEEeccCCC---hhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEee
Q 015348 228 YQTQNLKIR---SSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYV 304 (408)
Q Consensus 228 ~~~~~~g~~---~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (408)
...++++.+ ..+.++..+...++.+++.++.|++.||+|+|+.+..+.++..+..+...+ ..+.+.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~-----------~~~~~~ 182 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF-----------SPNYTV 182 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-----------cccHHH
Confidence 355668887 888999999999999999999999999999999988887776665544221 123334
Q ss_pred hhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 305 LIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
+....+..+++.+...+. .+++.|..|+++|+...++......+|..+++.+++.+.+
T Consensus 183 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 241 (505)
T TIGR00898 183 FLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD 241 (505)
T ss_pred HHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 555566677777666666 8899999999999999999988888999998888776654
No 218
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.91 E-value=4.7e-09 Score=92.88 Aligned_cols=128 Identities=13% Similarity=0.049 Sum_probs=102.1
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
+.+++|+|+.|.+++.++..+.+.+..+..|.+.||+|.|+....+.++..+-.+...+. ...++. +.+...
T Consensus 40 i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a-------~~~~~~-~~ll~~ 111 (417)
T COG2223 40 IKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFA-------VTYPST-WQLLVI 111 (417)
T ss_pred hccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHH-------ccCCch-HHHHHH
Confidence 447899999999999999999999999999999999999999888877765544432211 011111 355556
Q ss_pred HHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 309 SLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.+..|++.+.+......+++..|||++|.+.|++. .+|+|..+...++..+....|
T Consensus 112 gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 112 GLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 66667766666666888999999999999999999 999999999999999998877
No 219
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.91 E-value=4.3e-08 Score=89.40 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=83.8
Q ss_pred EeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC-----CCceeh-HHHHHHHHHHHHHhHhhhcccccccCcCceEe
Q 015348 230 TQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSV-----SPRKLI-SAIQAMMAVFMISDVLFVKGVYREMGVPDSLY 303 (408)
Q Consensus 230 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
.++.|+|.++.|+.... .+...+ .+++|++.||+ ||||.+ ..+.+..++......+ .. .. ...+
T Consensus 15 ~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~-~~------~~-~~l~ 84 (356)
T TIGR00901 15 LRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSF-LV------PS-TDLP 84 (356)
T ss_pred HHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHc-CC------cc-hhHH
Confidence 44579999999988655 333333 78899999997 777764 4444444443322211 00 00 1111
Q ss_pred ehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 304 VLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
.+....+..+.......|. .+++.|..|+++|+++.|+.....++|..+++.+++.+.+..|.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~ 148 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFA 148 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 2222222333333333444 88999999999999999999999999999999999999988773
No 220
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.90 E-value=3.2e-10 Score=101.08 Aligned_cols=123 Identities=12% Similarity=0.155 Sum_probs=106.4
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHH
Q 015348 232 NLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLL 311 (408)
Q Consensus 232 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
.+|.++...|++.....+...+.+++.|.+.||++|++++..+..+-..+.+.. +.....|.+.+.-.+
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~-----------~fs~~Fwq~~l~R~~ 130 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFAS-----------GFSNHFWQVLLCRGF 130 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHH-----------HHHHHHHHHHHHHHH
Confidence 378899999999999999999999999999999999999998888777766552 222445566677788
Q ss_pred HHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 312 EVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
.|+|.+.+.|. .+++++.+|+++|++++++++.....|..+|-..+..+.++.+
T Consensus 131 vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 131 VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 89999999999 9999999999999999999999999999999888888887765
No 221
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.90 E-value=1.3e-08 Score=90.27 Aligned_cols=153 Identities=14% Similarity=0.219 Sum_probs=125.7
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFL 84 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (408)
|-++++|+|..++.++.....+..+. ..++|++.|| +|.|+++..+.++..+.++...+.. ....+.++-
T Consensus 278 fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-----fg~k~vl~~~lvi~~~~~~~~~~~~----~~~~f~i~g 348 (438)
T COG2270 278 FGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-----FGSKPVLMIGLVILSIAALYLIFLE----GELDFWILG 348 (438)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCceeehHHHHHHHHHHHHHHHcc----ccHHHHHHH
Confidence 45569999999999998888865555 8999999999 9999999999988887777766665 455556777
Q ss_pred HHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhhHHHHHHHHHH
Q 015348 85 LLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-PPSMFLFFGLLVV 163 (408)
Q Consensus 85 ~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-~~~~f~i~~~~~~ 163 (408)
.+.|+..|..+....++..+..|+++ -++.+++++...-.++..||.+-+.+.+..| -|..+....++..
T Consensus 349 ll~g~s~G~~qA~SRSy~~~lvp~~k---------~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~ 419 (438)
T COG2270 349 LLVGTSLGGAQASSRSYLARLVPKGK---------EGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLL 419 (438)
T ss_pred HHHHHhcchHHHHHHHHHHHhCCCcc---------ccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 88899999999999999999999875 7888999999999999999999999888755 6666666666666
Q ss_pred HHHHHhhhccccc
Q 015348 164 LQFFITIAVRESA 176 (408)
Q Consensus 164 ~~~~~~~~~~e~~ 176 (408)
+..+...++|++.
T Consensus 420 iGl~~L~~v~~~~ 432 (438)
T COG2270 420 IGLLLLLRVKVPG 432 (438)
T ss_pred hhHhhEEeecCCC
Confidence 6666666677763
No 222
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.85 E-value=5.4e-07 Score=81.07 Aligned_cols=304 Identities=16% Similarity=0.143 Sum_probs=159.3
Q ss_pred HHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHH
Q 015348 21 LQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVAND 99 (408)
Q Consensus 21 ~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 99 (408)
+.-+-.+|.++ +..+-+..+|+| +++|.+ ....+..++.++.++++ +.+.-++..++.+++.+......-
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~---y~~Ri~--~~~~l~~~g~l~va~~~----~v~~~l~Gv~las~ssg~GE~tfL 134 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVP---YWIRIL--ICVALSAAGMLLVAFSP----SVWVRLLGVVLASLSSGLGEVTFL 134 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhcc---chHHHH--HHHHHHHHHHhheeecc----chhHHHHHHHHHhhhhhhhHHHHH
Confidence 33333356665 777778889854 555543 44456777888888888 888889999999999999988776
Q ss_pred HHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh-cCChhhHHHHHHHHHHHHHHHhhh-cccccc
Q 015348 100 ALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID-RFSPPSMFLFFGLLVVLQFFITIA-VRESAL 177 (408)
Q Consensus 100 a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~-~~g~~~~f~i~~~~~~~~~~~~~~-~~e~~~ 177 (408)
++.. ..++. ..+.+..+...++++|+..-..+.+ ..+.|..+.....++++..+..++ +|+++.
T Consensus 135 ~lt~-~y~~~-------------~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~ 200 (402)
T PF02487_consen 135 SLTH-FYGKS-------------SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPT 200 (402)
T ss_pred HHHH-hcCcc-------------ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 6544 33322 1344444666777777766555544 244577888887777666555444 543321
Q ss_pred cCC--CC------Ccc----------------hhHHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEecc
Q 015348 178 KLP--KS------QSN----------------VGIRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNL 233 (408)
Q Consensus 178 ~~~--~~------~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (408)
.++ +. +++ ...++.++..+..+. ....+.+..+.-+........... ..+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~--ymiPL~lVY~aEY~InqGv~~tl~--fp~~~ 276 (402)
T PF02487_consen 201 NRPYQESESEDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLW--YMIPLFLVYFAEYFINQGVAPTLL--FPNSF 276 (402)
T ss_pred cCCCcccCCCCcccccccccccccccccccchhhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhchHHHhc--CCccC
Confidence 110 00 000 001111222211111 111122222222333222222111 11112
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHH
Q 015348 234 KIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEV 313 (408)
Q Consensus 234 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
.-...++.+....+.+|.+++.--.. -+..|++... .++..+-.....+ ..+ +.+..+.+.++...+..|
T Consensus 277 ~~~r~~Y~~Y~~~YQ~GVFISRSS~~----~~rir~lwil-s~LQ~~nl~~~~l--~s~---~~fipsi~ivf~lif~eG 346 (402)
T PF02487_consen 277 FSPRDQYRWYQLLYQLGVFISRSSLP----FFRIRRLWIL-SLLQVINLVFLLL--QSW---YRFIPSIWIVFVLIFYEG 346 (402)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhccee----eeehhhHHHH-HHHHHHHHHHHHH--HHH---HHHhhHHHHHHHHHHHHH
Confidence 22345666777777777666643322 1223333322 2222222111111 001 111122233434444445
Q ss_pred HHHH-hhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 314 MFFF-KILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 314 ~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
+..+ .++.....+.+..|+++|--.+|......++|..++..++-.+-
T Consensus 347 LlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 347 LLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4444 44444777788889999999999998888888888877765544
No 223
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.84 E-value=9.6e-07 Score=81.86 Aligned_cols=256 Identities=11% Similarity=0.057 Sum_probs=146.5
Q ss_pred hhhccCC-----CHHHHHHHHHhhcccccc--cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh--ccCcc--
Q 015348 7 LKDSLNV-----DPSTLQLLQNSANLPMVG--KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL--SQSSI-- 75 (408)
Q Consensus 7 l~~~l~~-----s~~~~g~~~~~~~~~~~~--~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~--~~~~~-- 75 (408)
++|.+.+ +.+.+.++-+...+|..+ .++.+.+++| ++|++++-.....+....+++++. +..+.
T Consensus 29 lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-----~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~ 103 (472)
T TIGR00769 29 TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-----LSKEALFYTVISPFLGFFALFAFVIYPLSDLLH 103 (472)
T ss_pred hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcC
Confidence 4566655 346788888877766544 6899999999 999998877666666555555544 11000
Q ss_pred -----------------------hHHHHHHHHHHHHHHHHHHHh-hHHHHHHhhccCCCccchhhccCcchhHHHHHHHH
Q 015348 76 -----------------------SIFTMSLFLLLSNLGASIAEV-ANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSS 131 (408)
Q Consensus 76 -----------------------~~~~~~~~~~l~g~~~~~~~~-~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 131 (408)
+.|...+..+...+-...... ...++..|..+.++ -.|..+....+.
T Consensus 104 p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q---------akRfy~l~~~ga 174 (472)
T TIGR00769 104 PTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE---------AKRFYALFGLGA 174 (472)
T ss_pred CcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH---------HHHHHHHHHHHH
Confidence 244455556666665555554 66789999988764 778899999999
Q ss_pred HHHHHHHHHHHHHHhhc--------CChh----hHHHHHHHHHHHHHHHhhhcccc----cc------cCCCCCcchhHH
Q 015348 132 SMGGVLGNLLVGFAIDR--------FSPP----SMFLFFGLLVVLQFFITIAVRES----AL------KLPKSQSNVGIR 189 (408)
Q Consensus 132 ~~g~~ig~~l~~~l~~~--------~g~~----~~f~i~~~~~~~~~~~~~~~~e~----~~------~~~~~~~~~~~~ 189 (408)
++|.++++.+..++.+. ..|. ..+.+.++...+...+...+.+. +. ++++++++.+..
T Consensus 175 nlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~ 254 (472)
T TIGR00769 175 NVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTM 254 (472)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHH
Confidence 99999999888887631 1232 23344444433333333332211 11 000111112233
Q ss_pred HHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCCh----hhHHHHHHHHHHHHHHHHHHHHHhhccC
Q 015348 190 AQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRS----SVLGISKVFGQAAMLLWGVIYNSGLKSV 265 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 265 (408)
+. ++..+++|.++.+.+...+............-....+.. -|+ ...|.+....++..++..++.+++.+|+
T Consensus 255 es---~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~ 330 (472)
T TIGR00769 255 ES---LKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKY 330 (472)
T ss_pred HH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 444588898777766655533222222111100011111 122 2234445555666666667779999999
Q ss_pred CCceehHHHHHHHHH
Q 015348 266 SPRKLISAIQAMMAV 280 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~ 280 (408)
|.+....+.-++..+
T Consensus 331 Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 331 GWLTAALITPLVMLL 345 (472)
T ss_pred hHHHHHHHHHHHHHH
Confidence 987766555554444
No 224
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.83 E-value=6.2e-08 Score=93.81 Aligned_cols=158 Identities=15% Similarity=0.160 Sum_probs=125.3
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCc----chH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSS----ISI 77 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~----~~~ 77 (408)
+..|+++.+|.+.++...+...+. +.+++..++|.++|++ +||++.+.++.++..++..++++..... ...
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~----lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~ 85 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGW----LGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHD 85 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHhccCcccccchHH
Confidence 356788889999988877777766 7778889999999994 8999999999999999988877653211 122
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-------CC
Q 015348 78 FTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-------FS 150 (408)
Q Consensus 78 ~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-------~g 150 (408)
...+.+..+..+|.+...+...+...|..+++++ + +|.+...+++.+.++|+.+++.+.+++.+. .+
T Consensus 86 ~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~-~-----~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~ 159 (654)
T TIGR00926 86 LLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL-S-----LRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC 159 (654)
T ss_pred HHHHHHHHHHHhhccccccCchhhhHhhcCccch-h-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc
Confidence 3456777888889999999999999998876431 2 488889999999999999999998888744 36
Q ss_pred hhhHHHHHHHHHHHHHHHhh
Q 015348 151 PPSMFLFFGLLVVLQFFITI 170 (408)
Q Consensus 151 ~~~~f~i~~~~~~~~~~~~~ 170 (408)
|...|.+.++..++..+...
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFM 179 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 99999999888887766544
No 225
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.83 E-value=4.8e-08 Score=89.09 Aligned_cols=125 Identities=14% Similarity=0.055 Sum_probs=93.6
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
...+++|.+..+.|+..+...++..++.++.|++.||+++|+.+..+.....+..... . . +..+.+..
T Consensus 25 ~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~----------~-~~~~~l~~ 92 (355)
T TIGR00896 25 QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S----------A-PGTALLFA 92 (355)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H----------h-ccHHHHHH
Confidence 3566789999999999999999999999999999999999999888766555443331 1 1 12223334
Q ss_pred hHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 308 SSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
..+..+++.+...+. .....+..| ++|++..|+.+...++|..+++.+.+.+.+..+
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~ 150 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG 150 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 445555555444444 556677775 689999999999999999999999998887643
No 226
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.83 E-value=4.3e-07 Score=75.40 Aligned_cols=306 Identities=14% Similarity=0.074 Sum_probs=159.0
Q ss_pred hhhhhccCCCHHHHHHHHHhhccc-ccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLP-MVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~-~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
||+-+++|.-..|+|.+.-..... .++..+.|.++|+ .|||+--+.-++...++++ .-.++ .+-.+.+.
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-----qGRKracvtycitYiLsCi-TKhSp----qYkVLmVG 130 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-----QGRKRACVTYCITYILSCI-TKHSP----QYKVLMVG 130 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-----hccccceeeehHHHHHHHH-hhcCC----ceEEEeeh
Confidence 456677888888988877666643 3448899999999 9999865544444444332 12333 78888999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHH--------HHHHHHHHHHHHHHHHhhcC--Chhh
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWM--------SSSMGGVLGNLLVGFAIDRF--SPPS 153 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~g~~ig~~l~~~l~~~~--g~~~ 153 (408)
|++.|+..+....+..++...-..+ +|+.-+-|... +..+-.+++.+.+..+.+.+ |.-.
T Consensus 131 R~LGGiaTsLLFSaFEsWliaEHne----------kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVA 200 (454)
T KOG4332|consen 131 RVLGGIATSLLFSAFESWLIAEHNE----------KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVA 200 (454)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhh----------ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999988887775543221 13322222221 22333444555555666654 4555
Q ss_pred HHHHHHHHHHHHHHHhh-hcccccccCCCCCcchhHHHHHH-HHHHhcccchhHHHHHHHHhhh-cccccccceeEEEEE
Q 015348 154 MFLFFGLLVVLQFFITI-AVRESALKLPKSQSNVGIRAQLS-ELSAALRKPEIMYSVAWFAASY-SIIPVLTGTMFFYQT 230 (408)
Q Consensus 154 ~f~i~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 230 (408)
+|-..+-+..+.....+ -..|...++.+ +++...+.+ ..+.+..++++..+..+..+.- ........|.|
T Consensus 201 PFdAAacfLaigmAvil~~W~ENygdps~---~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTP---- 273 (454)
T KOG4332|consen 201 PFDAAACFLAIGMAVILSSWSENYGDPSE---NKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTP---- 273 (454)
T ss_pred chHHHHHHHHHHHHHHHhhhhhccCChhh---hHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecc----
Confidence 55443333333322222 24444332222 112222222 1223345555554444443311 11111112222
Q ss_pred eccCCCh--hhHHHHHHHHHHHHHHHHHHHHHhhccCCCc--eehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 231 QNLKIRS--SVLGISKVFGQAAMLLWGVIYNSGLKSVSPR--KLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 231 ~~~g~~~--~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
.+.=++ .--|++.+...+++++|+-+..|+..|...| ..+.+...+......+........+.. . .....++
T Consensus 274 -aLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~k-e--s~~~s~i 349 (454)
T KOG4332|consen 274 -ALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSK-E--SPSESLI 349 (454)
T ss_pred -cCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCc-C--CchHHHH
Confidence 122112 2357788888899999999998887765543 234444444444333332211111111 1 1111122
Q ss_pred hhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHH
Q 015348 307 FSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFV 342 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~ 342 (408)
.+.. .-...+.+.|. .-+-.+..|++.|++.+-.+
T Consensus 350 ~F~~-~E~cvGlfwPSimkmRsqyIPEearstimNfF 385 (454)
T KOG4332|consen 350 GFCL-FEACVGLFWPSIMKMRSQYIPEEARSTIMNFF 385 (454)
T ss_pred HHHH-HHHHHhhcchHHHHHHHhhCCHHHHhhhhhhe
Confidence 2222 22233455676 66778889999998765443
No 227
>PRK09669 putative symporter YagG; Provisional
Probab=98.78 E-value=8.9e-08 Score=90.09 Aligned_cols=137 Identities=11% Similarity=0.118 Sum_probs=97.3
Q ss_pred hhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHH
Q 015348 5 FFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLF 83 (408)
Q Consensus 5 ~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (408)
+|.++.++ ++...+.+.....++.++ .+++++++|| +|||+.+..+.+...+......+.+ ..+.+.+++.
T Consensus 254 y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-----~gk~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 325 (444)
T PRK09669 254 YYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGK-----FDRVRAFKWTIVAFVILSALIFFIP--PSNVWLIFAL 325 (444)
T ss_pred eeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHHHHHhC--cchHHHHHHH
Confidence 34443443 333344444444444445 6889999999 9999998888766554444333332 2367777888
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Q 015348 84 LLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSP 151 (408)
Q Consensus 84 ~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~ 151 (408)
.++.|++.+...+...++++|..|.++ .+..++..|...+.......+|..+|+.++|.+.+..|+
T Consensus 326 ~~i~g~~~~~~~~~~~am~ad~~d~~e--~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 326 NILFNFIQNLTTPLQWSMFSDVVDYEE--KRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhh--hhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999999987544 222233567788888889999999999999999888776
No 228
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.76 E-value=4.1e-08 Score=91.33 Aligned_cols=131 Identities=14% Similarity=0.097 Sum_probs=110.1
Q ss_pred EeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhH
Q 015348 230 TQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSS 309 (408)
Q Consensus 230 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
..+++++.++-+++......|.+++.+..+.+.||+|.|+++..+.++.++..++..+. .....+.++..-
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~a---------a~~~~~~~~~~R 135 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLA---------ASIGFYLLLVLR 135 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHH---------HHhcchhhHHHH
Confidence 34578899999999999999999999999999999999999999988888776653321 112222456677
Q ss_pred HHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCC
Q 015348 310 LLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY-TGVTGD 369 (408)
Q Consensus 310 ~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~-~g~~~~ 369 (408)
+..|++.+...|. ..+..+-.|+++|++..++..+...+|..++..++|.+.+. +|++..
T Consensus 136 ~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~si 197 (466)
T KOG2532|consen 136 FLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSI 197 (466)
T ss_pred HHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchH
Confidence 8889888888888 88899999999999999999999999999999999999998 776543
No 229
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=9e-08 Score=90.17 Aligned_cols=149 Identities=12% Similarity=0.235 Sum_probs=128.5
Q ss_pred hccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 015348 9 DSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLS 87 (408)
Q Consensus 9 ~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (408)
++.+.+..+.+.+.++....-.+ .++.|+++|+.+ .+++.+..++.+..+++...+.+.+ +++.+...-.+.
T Consensus 326 ~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~---~~~~~~~~~~ll~~gl~~~~~p~~~----~~~~l~~~~~~f 398 (509)
T KOG2504|consen 326 KSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG---IRALVLFLLTLLIAGLARLFLPFAT----TYVGLIVFSILF 398 (509)
T ss_pred hhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc---cchHHHHHHHHHHHHHHHHHHHHhc----cHHHHHHHHHHH
Confidence 47899999999999999966665 999999999932 2355667777788888888888888 999999999999
Q ss_pred HHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhhHHHHHHHHHHHHH
Q 015348 88 NLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-PPSMFLFFGLLVVLQF 166 (408)
Q Consensus 88 g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-~~~~f~i~~~~~~~~~ 166 (408)
|+..+.........+.|..+.++ ...+.++......++.++||+++|.+.+..| |...|...+...+++.
T Consensus 399 G~~~g~~~~l~~~i~~~~~g~~~---------l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~ 469 (509)
T KOG2504|consen 399 GFCVGSFSSLTPVILVDLVGLEK---------LSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSA 469 (509)
T ss_pred HHHHHHHHHHHHHHHHHHcChhh---------cchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHH
Confidence 99999998888778889988764 8888999999999999999999999998877 9999999999998888
Q ss_pred HHhhhcc
Q 015348 167 FITIAVR 173 (408)
Q Consensus 167 ~~~~~~~ 173 (408)
..++..+
T Consensus 470 ~~~~~~~ 476 (509)
T KOG2504|consen 470 VLLLILR 476 (509)
T ss_pred HHHHHhH
Confidence 7777666
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.72 E-value=1.3e-07 Score=88.00 Aligned_cols=137 Identities=15% Similarity=0.096 Sum_probs=88.7
Q ss_pred EeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCCceehHHHHHHHHHHHHHhHhhhcccccccCc----Cce
Q 015348 230 TQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLK----SVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGV----PDS 301 (408)
Q Consensus 230 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 301 (408)
.+.+|.+....+.+.....+..++..++.|+++| |+|||+.+...........+..+..........+. ...
T Consensus 31 l~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~ 110 (477)
T TIGR01301 31 VQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTK 110 (477)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccch
Confidence 4568999999999999999999999999999999 59999988765444333332222111110000000 000
Q ss_pred E---eehhhh-HHHHHHHHHhhhhHHHHHHHhcCCchh--HHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCC
Q 015348 302 L---YVLIFS-SLLEVMFFFKILPFSVYIAQVCPPGCE--GSIMAFVMSAVALAFIVSGYLGVAL--ASYTGV 366 (408)
Q Consensus 302 ~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~--g~~~g~~~~~~~lg~~ig~~~~g~l--~~~~g~ 366 (408)
. +..+.. .+..........|..+++.|.+|+++| +.+++..+...++|+.+|+.+++.. .+.++.
T Consensus 111 ~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~ 183 (477)
T TIGR01301 111 PRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPF 183 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccc
Confidence 0 011111 122222233444668899999998865 6799999999999999999999875 444443
No 231
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.68 E-value=3.3e-07 Score=81.51 Aligned_cols=137 Identities=18% Similarity=0.108 Sum_probs=103.7
Q ss_pred hhhhhh--ccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHH
Q 015348 4 NFFLKD--SLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTM 80 (408)
Q Consensus 4 ~~~l~~--~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (408)
..|+++ ++|.++.+.+...+.......+ ..+.++++|| +++|+.+.++..+..++.++....+ +...
T Consensus 164 ~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-----~g~~~~l~~~~~l~~~~~~l~~~~~----~~~~- 233 (310)
T TIGR01272 164 VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-----ISQGRYLAFNAFLAVLLSIGAALTH----GYVA- 233 (310)
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCHHHHHHHHHHHHHHHHHHHHHcC----CHHH-
Confidence 456654 3799999999999988877777 8899999999 9999988888877777765555544 3322
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGL 160 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~ 160 (408)
.....+.|++.+...|...+...+..+++. ++..++. ....+|..++|.+.|.+.+..|.+..|++...
T Consensus 234 ~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~----------~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 234 MWFVLALGLFNSIMFPTIFSLALNALGRHT----------SQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhh----------hhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 235557889999999988788877776542 3334443 56779999999999999999999998875544
Q ss_pred H
Q 015348 161 L 161 (408)
Q Consensus 161 ~ 161 (408)
.
T Consensus 303 ~ 303 (310)
T TIGR01272 303 C 303 (310)
T ss_pred H
Confidence 3
No 232
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.63 E-value=1e-07 Score=89.17 Aligned_cols=139 Identities=17% Similarity=0.232 Sum_probs=113.6
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
..||.++.+|.+ ...+.+.....++.++ .|++++++|| +|+|+.+..+..+.+++.+++.+.+. .+.+.++
T Consensus 248 ~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r-----~gk~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 319 (428)
T PF13347_consen 248 LPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR-----FGKKKVYIIGLLLAALGFLLLFFLGP--GSPWLVL 319 (428)
T ss_pred HHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH-----ccceeehhhhHHHHHHHHHHHHHHHh--hhHHHHH
Confidence 356777777777 5666666666666555 8999999999 99999999999999998888777642 3889999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSP 151 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~ 151 (408)
+..++.|++.+...+...++++|..+.++ .|..+++.|..++.......+|..+++.+.+.+.+..|+
T Consensus 320 i~~~l~gi~~~~~~~~~~a~~ad~id~~e--~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 320 ILFILAGIGYGAFFVIPWAMLADVIDYDE--WKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHHhHhhhcccccccccccccchhhHH--HhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999998765 222344678899999999999999999999988776555
No 233
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.62 E-value=8.8e-07 Score=81.34 Aligned_cols=134 Identities=21% Similarity=0.240 Sum_probs=102.8
Q ss_pred hhhhhhccC-CCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 4 NFFLKDSLN-VDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 4 ~~~l~~~l~-~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
+.|+ +|.| .+....+.+.++..+.-+. -.+.+++..| +|.|+++.++.+..++=+.+++...+ +.+...
T Consensus 231 ~~yl-~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-----~g~~~ll~~a~~~~~vR~~l~a~~~~---~~~~~~ 301 (400)
T PF03825_consen 231 SIYL-QELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-----FGIKWLLLLALVAYAVRWLLYAYFSD---PWPFIV 301 (400)
T ss_pred HHHH-HHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHHHHHHhcC---CcHHHH
Confidence 4566 4555 7777778777665544333 4567888888 99999999999999998888888731 333322
Q ss_pred ----HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHH-HHHHHHHHHHHHHHHhhcCChhhHH
Q 015348 82 ----LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMS-SSMGGVLGNLLVGFAIDRFSPPSMF 155 (408)
Q Consensus 82 ----~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~g~~ig~~l~~~l~~~~g~~~~f 155 (408)
....+.|+..+........++.+..|++ .|++.+++++.. ..+|..+|..++|++.+++|-+..|
T Consensus 302 ~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~---------~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~ 371 (400)
T PF03825_consen 302 ALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE---------LRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMF 371 (400)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc---------chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhh
Confidence 2345799999999999999999999986 489999988764 6799999999999999987765543
No 234
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.60 E-value=2.3e-07 Score=81.86 Aligned_cols=146 Identities=10% Similarity=-0.019 Sum_probs=110.5
Q ss_pred HHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhh
Q 015348 210 WFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFV 289 (408)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (408)
..|+.+.......+.+.+..++.++.+..+.+++......+-.+.+...+++.||+|.|+-+..+..++++.+.+....
T Consensus 20 ~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pA- 98 (422)
T COG0738 20 SLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPA- 98 (422)
T ss_pred HHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh-
Confidence 3334466666667777777888899999999999999999999999999999999999999999999888876663210
Q ss_pred cccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 290 KGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
.....+.......+..+.+....-.. +.++....|++...+-..+.+.++.+|..++|.+++.+..+
T Consensus 99 -------a~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 99 -------ASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred -------hhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 00011112233333344444434444 77888999998899999999999999999999999999874
No 235
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.57 E-value=2.7e-07 Score=87.48 Aligned_cols=138 Identities=11% Similarity=0.077 Sum_probs=88.8
Q ss_pred ceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCCcee-hHHHHHHHHHHHHHhHhhhcccccccC
Q 015348 223 GTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLK----SVSPRKL-ISAIQAMMAVFMISDVLFVKGVYREMG 297 (408)
Q Consensus 223 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (408)
...++|+++.+|+++...|.+..+..+...+..++.|.++| |+|+||. +..+....++...+... . +. .+
T Consensus 27 ~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~-~---p~-~~ 101 (473)
T PRK10429 27 MYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFS-A---HL-FE 101 (473)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHc-C---CC-CC
Confidence 34455677889999999999999999999999999999999 4587554 44454444444332211 0 00 10
Q ss_pred cCceEeehhhhHHHH-HHHHHhhhhHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 298 VPDSLYVLIFSSLLE-VMFFFKILPFSVYIAQVC-PPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 298 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
............+.. ........|..++..|.. ++++|.+..+......++++.+.+.+...+.+..|
T Consensus 102 ~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 102 GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 000111122222222 233345567788999998 57899999998788888887777766666655555
No 236
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.53 E-value=3.6e-07 Score=86.22 Aligned_cols=155 Identities=11% Similarity=0.022 Sum_probs=115.8
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhc--c----CcchHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILS--Q----SSISIF 78 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~ 78 (408)
+.++++|.|+.+.|.+.....+..++ ....+.+.+| ++.|+.+.++.++.+++.+...... . ...+.+
T Consensus 278 ~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-----~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~ 352 (468)
T TIGR00788 278 ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-----FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEV 352 (468)
T ss_pred EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCee
Confidence 44568999999999999888866555 7778888888 8999999999888887765532111 0 001344
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-----hhh
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-----PPS 153 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-----~~~ 153 (408)
.....-++.+++.++...+...++.+..|++. +|+.+++.+...++|..+++.+++.+.+..| ++.
T Consensus 353 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~---------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~ 423 (468)
T TIGR00788 353 FVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC---------ESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNN 423 (468)
T ss_pred eeeehhHHHHHHHHHHHccHHHHHHHhCCCCc---------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 55666788999999999999999999999864 8999999999999999999999999998877 655
Q ss_pred HHHHHHHHHHHH---HHHhhhccc
Q 015348 154 MFLFFGLLVVLQ---FFITIAVRE 174 (408)
Q Consensus 154 ~f~i~~~~~~~~---~~~~~~~~e 174 (408)
.+....+..+.. +....++|+
T Consensus 424 ~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 424 LWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCC
Confidence 555443333333 233335785
No 237
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.5e-06 Score=80.38 Aligned_cols=157 Identities=16% Similarity=0.122 Sum_probs=109.3
Q ss_pred hccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchH--H---HHHH
Q 015348 9 DSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISI--F---TMSL 82 (408)
Q Consensus 9 ~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~ 82 (408)
++-|+++.+..+........... ..+...+.|| .||||.++.+...+.+..+++.......... | ..+.
T Consensus 298 ~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-----~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 298 KTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-----LGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 46788998888887777754444 8889999999 9999999999998888877766443211112 1 1234
Q ss_pred HHHHHHHHHHHH-HhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 83 FLLLSNLGASIA-EVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 83 ~~~l~g~~~~~~-~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
+.++..++.+.. .|...-+.+|.+|+.+ |..++++......+...+-...-..+.+.+|- ..|.+..+.
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~---------R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~ 442 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSA---------RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIP 442 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccc---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHH
Confidence 444444444444 3444478889999865 99999988888777777766666666677776 667777777
Q ss_pred HHHHHHHhh-hcccccccCC
Q 015348 162 VVLQFFITI-AVRESALKLP 180 (408)
Q Consensus 162 ~~~~~~~~~-~~~e~~~~~~ 180 (408)
+++..+..+ .+||++.+..
T Consensus 443 ~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 443 LAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred HHHHHHHHHHhCcccCCCCH
Confidence 776665544 5999876543
No 238
>PRK11462 putative transporter; Provisional
Probab=98.51 E-value=7.9e-07 Score=83.82 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=94.2
Q ss_pred ceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc----CCCceeh-HHHHHHHHHHHHHhHhhhcccccccC
Q 015348 223 GTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKS----VSPRKLI-SAIQAMMAVFMISDVLFVKGVYREMG 297 (408)
Q Consensus 223 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (408)
.+..+|+++..|+++...|.+..+.-+-..+.-++.|+++|| +||||.. .++.+..++...+. +.... ++
T Consensus 30 ~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll-f~~p~----~s 104 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA-YSTPD----LS 104 (460)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH-HhCCC----CC
Confidence 344556778899999999999999999999999999999996 4666554 44445554443332 11111 11
Q ss_pred cCc-eEeehhhhHHHHHHHHHhhhhHHHHHHHhcC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 298 VPD-SLYVLIFSSLLEVMFFFKILPFSVYIAQVCP-PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 298 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
... ..+..+...+..........|..++..|.++ +++|++..+..+...++|..+++.+...+.+..|.
T Consensus 105 ~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~ 175 (460)
T PRK11462 105 MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG 175 (460)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 111 1122222223333444556688899999987 58899999999999999998988887777777663
No 239
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.51 E-value=4.8e-07 Score=81.90 Aligned_cols=147 Identities=14% Similarity=0.147 Sum_probs=115.3
Q ss_pred CHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH
Q 015348 14 DPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGAS 92 (408)
Q Consensus 14 s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 92 (408)
+....|.+.+..-..-+. -.+..++.+| .|.|+.++++..+.++=..++++++ +++.+...+.+.++-.+
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~r-----ig~k~~Lllag~i~~iRi~~~~~~~----~~~~i~~~klLH~~e~~ 327 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINR-----IGAKNLLLLAGVIMAIRIIGSGFAT----NPWVISLIKLLHALEFP 327 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H-HHHHHHHHHHHHHHHHHHHHT------SHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHh-----cChHhHHHHHHHHHHHHHHHHhhhc----chHHHHHHHHHHHHHHH
Confidence 335567666665533332 5567889999 9999999999999999999999999 99999999999999999
Q ss_pred HHHhhHHHHHHhhccCCCccchhhccCcchhHHHH-HHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHhhh
Q 015348 93 IAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFV-WMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFITIA 171 (408)
Q Consensus 93 ~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 171 (408)
....+..-++.+..|++ ..++.+.+. +...++|.++.+.++|.+.|+.|.+..|++.+.+.+...++..+
T Consensus 328 l~lva~fkYI~~~fd~r---------lsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 328 LLLVAAFKYITAHFDKR---------LSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHHHHHHHHHHS-GG---------GHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHh---------HHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhee
Confidence 99999999999998864 355666663 67889999999999999999999999999998887777666555
Q ss_pred -ccccccc
Q 015348 172 -VRESALK 178 (408)
Q Consensus 172 -~~e~~~~ 178 (408)
++++++.
T Consensus 399 ~l~~~~~~ 406 (412)
T PF01306_consen 399 TLKKDKKQ 406 (412)
T ss_dssp HS--SSST
T ss_pred eecCCCcc
Confidence 6665543
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=98.50 E-value=5.8e-07 Score=85.68 Aligned_cols=126 Identities=13% Similarity=0.074 Sum_probs=85.0
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..+++|+|..+.+.+.......+ ...+..|++.||+|+|+++.++.+...+..+...+.... ....+.+.+.+.
T Consensus 53 L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~-----~i~~s~~~l~l~ 126 (591)
T PTZ00207 53 MQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQE-----VIEGSVVRLSVY 126 (591)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcc-----cccCcHHHHHHH
Confidence 46678999999998776643333 456678999999999999999988887776553321110 011223344444
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIV-SGYLGVALA 361 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~i-g~~~~g~l~ 361 (408)
....+.+.+...+. ...+.+..| ++||++.|+......+|..+ ++...+.+.
T Consensus 127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556665544444 666778886 78899999999999999975 445555544
No 241
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.45 E-value=1.6e-06 Score=79.49 Aligned_cols=140 Identities=17% Similarity=0.185 Sum_probs=114.5
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMS 81 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (408)
..||.+..+|-++.+............+. .+++..+++| +|+|+.+.++.++..++.+++.+.+ .++.+..+
T Consensus 259 ~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-----~gkk~~~~~~~~~~~i~~~~~~f~~--~~~~~l~~ 331 (467)
T COG2211 259 MVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-----FGKKKLFLIGLLLLAVGYLLLYFTP--AGSVVLIV 331 (467)
T ss_pred hheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hchHHHHHHHHHHHHHHHHHHHhhc--CcchHHHH
Confidence 35777777888888887777777766666 7889999999 9999999999999999999998887 44788888
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSP 151 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~ 151 (408)
+..++.+++.+...+...++++|..+.+| -|...+.-|...+......=+|..++..+.|+..+..|+
T Consensus 332 ~~~~i~~~g~~~~~~l~wam~~d~vDyge--~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 332 VALIIAGVGTGIANPLPWAMVADTVDYGE--WKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHhhccccccHHHhcchhhHHH--HHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999887654 222333567778888888888999998888888776554
No 242
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.43 E-value=3.6e-05 Score=67.67 Aligned_cols=124 Identities=13% Similarity=0.138 Sum_probs=88.1
Q ss_pred eccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHH
Q 015348 231 QNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSL 310 (408)
Q Consensus 231 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
+++|++..+++.+...+...+.+...+.|.+.||+|||+......++....++.-. . +....++..-+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-----------~-~~~~~L~~GRv 129 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-----------S-SNYPVLLLGRV 129 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-----------c-cccHHHHHHHH
Confidence 45899999999999999999999999999999999999988777777777665521 1 33446666667
Q ss_pred HHHHHHHhhhhH-HH-HHHHh----cCCchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCC
Q 015348 311 LEVMFFFKILPF-SV-YIAQV----CPPGCEGSIMAFVMSA-VALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 311 ~~~~~~~~~~~~-~~-~~~~~----~p~~~~g~~~g~~~~~-~~lg~~ig~~~~g~l~~~~g~ 366 (408)
..|+........ -+ ++.|+ .|++..+..++..+.. +.+..+.++.++-.+.+..|.
T Consensus 130 lgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~ 192 (354)
T PF05631_consen 130 LGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF 192 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC
Confidence 777776555444 22 34444 4556667777766633 445556666777777777664
No 243
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.41 E-value=1.5e-06 Score=82.47 Aligned_cols=121 Identities=11% Similarity=-0.060 Sum_probs=81.7
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhh
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIF 307 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
+...++|- .....++.....++..+..++.|+++|.+|||..+..+.++..+..+.. +..++.-.++.
T Consensus 69 ~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~-----------atA~~~~~~ia 136 (599)
T PF06609_consen 69 YINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC-----------ATAQNMNTFIA 136 (599)
T ss_pred HHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh-----------hcCCcHHHHHH
Confidence 34445663 4556778888888999999999999999999999988887777766552 22233335566
Q ss_pred hHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 308 SSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
...+.+++.+........++|..|.+.|+...++.....-....+++.++..+
T Consensus 137 g~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~ 189 (599)
T PF06609_consen 137 GMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLF 189 (599)
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHh
Confidence 66777777655544466689999999998776655443333333444444443
No 244
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.36 E-value=2.7e-06 Score=79.57 Aligned_cols=158 Identities=17% Similarity=0.168 Sum_probs=111.8
Q ss_pred EEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhh
Q 015348 229 QTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFS 308 (408)
Q Consensus 229 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
..++.+....+.+...+...++-+++.+..+.+.||++..+.+....+...+..++... ..+...+++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~-----------~~s~~~~ial 140 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA-----------VHSFPGLIAL 140 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-----------HhhhHHHHHH
Confidence 34667888889999999999999999999999999999666555544444443333221 1233356666
Q ss_pred HHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHH-HHhhhh
Q 015348 309 SLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALII-QAVCTI 386 (408)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~-~~~~~~ 386 (408)
-++.|+.++...|. ..++.....+++||+.+|+..+..++|+.+|++++..+.+.-|... ..++.+.+++ +++...
T Consensus 141 r~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~--~~gW~~~FiI~G~i~~~ 218 (495)
T KOG2533|consen 141 RFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG--LAGWRWLFIIEGVITLV 218 (495)
T ss_pred HHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC--cCCceeehhHHHHHHHH
Confidence 78888888888888 8888999999999999999999999999999999888766433211 1222333333 334444
Q ss_pred hhhhhhhccCCCC
Q 015348 387 LPLYWSYFMPDGV 399 (408)
Q Consensus 387 ~~~~~~~~~~~~~ 399 (408)
.+++.++.+|+..
T Consensus 219 ~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 219 LGIVVFFFLPDNP 231 (495)
T ss_pred HHheEEEEecCCh
Confidence 4555566666544
No 245
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.34 E-value=2.8e-06 Score=81.70 Aligned_cols=120 Identities=9% Similarity=0.100 Sum_probs=97.1
Q ss_pred eccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHH
Q 015348 231 QNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSL 310 (408)
Q Consensus 231 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
+..+.+.....+..++..++..+|.++.|.++||+|||+++..+.++..+..+... ...++....+.-+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a-----------~a~~~~~~~~~Rf 179 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA-----------FAPNYWMFLIFRF 179 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH-----------HhCcHHHHHHHHH
Confidence 34556777788889999999999999999999999999999999988888765532 2344556666677
Q ss_pred HHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 311 LEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 311 ~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
..|++....... ..+..|..++++|+.+..+ ......++.+++..++++..
T Consensus 180 l~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 180 LSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 777776655555 8899999999999999999 77778888888888888876
No 246
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.32 E-value=1.7e-05 Score=70.37 Aligned_cols=142 Identities=23% Similarity=0.295 Sum_probs=106.7
Q ss_pred hccCCCH--HHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 015348 9 DSLNVDP--STLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLL 85 (408)
Q Consensus 9 ~~l~~s~--~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (408)
++++.+. .+.++..+...+.... .++.|.++|| +|||+.+..+.....++.+...+... .+.+.+++.|.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-----~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 102 (338)
T COG0477 30 STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR-----YGRRKVLIIGLLLFLLGTLLLALAPN--VGLALLLILRL 102 (338)
T ss_pred HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccc-----ccchHHHHHHHHHHHHHHHHHHhCcc--chHHHHHHHHH
Confidence 4444444 4778888887766666 6899999999 89998888887665555566666661 24888999999
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHH-HHHHHHHHHHHHHHHHhhc--CChhhHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWM-SSSMGGVLGNLLVGFAIDR--FSPPSMFLFFGLLV 162 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~ig~~l~~~l~~~--~g~~~~f~i~~~~~ 162 (408)
..|++.+...+...+++.|..++ . + +|+...+.... ...+|.++++.+++.+... .+||..|.......
T Consensus 103 ~~g~~~~~~~~~~~~~~~~~~~~-~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 103 LQGLGGGGLLPVASALLSEWFPE-A--T-----ERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHhhhHHHHHHHHHHHHHhcCc-h--h-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 99999999999999999999886 1 1 38888888777 5788888888887777654 67998766665554
Q ss_pred HHH
Q 015348 163 VLQ 165 (408)
Q Consensus 163 ~~~ 165 (408)
...
T Consensus 175 ~~~ 177 (338)
T COG0477 175 LLL 177 (338)
T ss_pred HHH
Confidence 433
No 247
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.32 E-value=2.9e-06 Score=77.75 Aligned_cols=115 Identities=11% Similarity=0.158 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhccC-----cchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHH
Q 015348 51 PYIAIGAFLQAVSWLAIAILSQS-----SISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQS 125 (408)
Q Consensus 51 ~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~ 125 (408)
+.+.++.++..++.+++.++... ..+.+.++++..+.++|.|...+...++..|..+++++ + +|.+..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~-~-----~~~~~F~ 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD-S-----RRDSFFN 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT-T-----HHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch-h-----hhhhhHH
Confidence 46778888888888885444321 12356788889999999999999999999999998742 3 5888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHhhh
Q 015348 126 FVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFITIA 171 (408)
Q Consensus 126 ~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 171 (408)
+++.+.++|..+++.+.+++-++.||...|.+.++..+++.+....
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999888877665543
No 248
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.29 E-value=1.5e-05 Score=73.39 Aligned_cols=151 Identities=10% Similarity=0.108 Sum_probs=104.3
Q ss_pred HHHHHHHHhhhcccccccce-eEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-ceehHHHHHHHHHHH
Q 015348 205 MYSVAWFAASYSIIPVLTGT-MFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSP-RKLISAIQAMMAVFM 282 (408)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~ 282 (408)
+...+..++...-....... .+|...-+.+.+.+..|+..+...++..+.++..+....|.+. |+.+..+.+++.+..
T Consensus 37 ~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~ 116 (488)
T KOG2325|consen 37 YLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGN 116 (488)
T ss_pred HHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHH
Confidence 44444444433322223232 3333333477788999999999999999999999999998874 677777777777765
Q ss_pred HHhHhhhcccccccCcCc-eEeehhhhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 283 ISDVLFVKGVYREMGVPD-SLYVLIFSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
++-..+. ..++ ..+.+...-++.|++.+.....-.++++..-.++|.++++..+....+|..+||.+...+.
T Consensus 117 llY~~l~-------~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 117 LLYLALA-------YVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHH-------hcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 5532211 1222 4446666777778777766667788888877888999999888888888888888776655
Q ss_pred H
Q 015348 362 S 362 (408)
Q Consensus 362 ~ 362 (408)
.
T Consensus 190 ~ 190 (488)
T KOG2325|consen 190 P 190 (488)
T ss_pred h
Confidence 3
No 249
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.28 E-value=5.5e-06 Score=79.42 Aligned_cols=112 Identities=14% Similarity=0.159 Sum_probs=87.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
.+.+++.+...++..++.++.|+++|++|||+.+..+.+...+..++... ..++..+...-+..|++.+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~-----------a~~~~~l~~GR~l~G~g~G 157 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIAL-----------APSWYQLIVGRILTGLGVG 157 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-----------hhhHHHHHHHHHHhccchh
Confidence 35589999999999999999999999999999999888887777665332 2344466677777777765
Q ss_pred hhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 318 KILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
..... ..+.+|+.|++.||...+..+....+|..++ .+.+...
T Consensus 158 ~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~ 201 (513)
T KOG0254|consen 158 GASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGT 201 (513)
T ss_pred hhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 55444 8899999999999999999999988888887 3333333
No 250
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.27 E-value=1.7e-06 Score=79.06 Aligned_cols=144 Identities=15% Similarity=0.193 Sum_probs=120.2
Q ss_pred hccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 015348 9 DSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLS 87 (408)
Q Consensus 9 ~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (408)
+|++-.+.-.|........+-+. -++.+.+..| .|+-+++.+++....+=.+..+..+ |+|..+..-+++
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-----iGHv~v~~lgLa~~~~Rf~~~S~L~----n~W~vLPieilq 469 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-----IGHVNVMYLGLACNVGRFLYYSYLQ----NPWMVLPIEILQ 469 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-----hcccceeeehhhHHHHHHHHHHHhc----CchheeeHHHHH
Confidence 67777777777554444455555 5678899999 9999999999999999999999999 999999999999
Q ss_pred HHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHH-HHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHH
Q 015348 88 NLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWM-SSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQF 166 (408)
Q Consensus 88 g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~ 166 (408)
|+..+..+.+.-+++....|++- +..++++... ...+|--+|.++||.+.+.+|-|..|.+.++.+++.+
T Consensus 470 git~aliWaa~~sY~s~vaPp~l---------~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 470 GITHALIWAAIISYASHVAPPGL---------RATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTL 540 (618)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcc---------hHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHH
Confidence 99999999999999999999864 6666776644 4567888999999999999999999999998888776
Q ss_pred HHhh
Q 015348 167 FITI 170 (408)
Q Consensus 167 ~~~~ 170 (408)
+...
T Consensus 541 ~~~~ 544 (618)
T KOG3762|consen 541 ALFI 544 (618)
T ss_pred HHHH
Confidence 5443
No 251
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.24 E-value=1.3e-06 Score=79.56 Aligned_cols=147 Identities=14% Similarity=0.011 Sum_probs=103.3
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccC-CCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHH
Q 015348 233 LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSV-SPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLL 311 (408)
Q Consensus 233 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
+|+|+++..-+...+....-+...+.|+++||+ |+|+.+..+.++..+..+.... -+ ......+.+....
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~--------~~-~~~~~gl~i~L~~ 126 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAI--------SS-VSGPGGLYIGLAL 126 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhc--------cc-cccccHHHHHHHH
Confidence 568888877776666666677788889999994 8999999888888877655221 00 0122244555555
Q ss_pred HHHHHHhhhhH-HHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhhhh
Q 015348 312 EVMFFFKILPF-SVYIAQVCPPG--CEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCTILP 388 (408)
Q Consensus 312 ~~~~~~~~~~~-~~~~~~~~p~~--~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 388 (408)
..++.+.+=|. ..++.|..|++ +|-..++++....|+|+.++|.+.+++.+..|+ ...+..+++...+.
T Consensus 127 I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~--------~~gF~~aavGm~~g 198 (498)
T COG3104 127 IIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGW--------HVGFGLAAVGMIIG 198 (498)
T ss_pred HHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCH--------HHHHHHHHHHHHHH
Confidence 66666666566 77888887764 355677888888899999999999999998774 44556666666666
Q ss_pred hhhhhccC
Q 015348 389 LYWSYFMP 396 (408)
Q Consensus 389 ~~~~~~~~ 396 (408)
++.+...+
T Consensus 199 l~~f~~~~ 206 (498)
T COG3104 199 LVIFLLGR 206 (498)
T ss_pred HHHHHHcc
Confidence 65555444
No 252
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.21 E-value=8.6e-06 Score=70.38 Aligned_cols=298 Identities=10% Similarity=0.094 Sum_probs=165.7
Q ss_pred eecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhh
Q 015348 37 VVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKA 116 (408)
Q Consensus 37 ~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~ 116 (408)
.+.|. .+-||+++.-.+.....+.+..+.+ +.+..=+.-+..|...+. ..+..+++-+..++++
T Consensus 64 lLTD~-----lrYKPvivlq~ls~v~~w~~lv~g~----sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~------ 127 (433)
T KOG3810|consen 64 LLTDY-----LRYKPVVVLQALSGVPVWIMLVFGP----SVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEM------ 127 (433)
T ss_pred HHhhh-----hhcceeeeeeccchhHHHHHHHhcC----CchheeeehhhcChHHHH-HHhhhheeeeecCHHH------
Confidence 57898 8899999888777777777777887 888777777777766554 3444577766666653
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc--CChhhHHHHHHHHHHHHHHHhhhccccccc------CCCC------
Q 015348 117 QSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR--FSPPSMFLFFGLLVVLQFFITIAVRESALK------LPKS------ 182 (408)
Q Consensus 117 ~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~--~g~~~~f~i~~~~~~~~~~~~~~~~e~~~~------~~~~------ 182 (408)
+-++.+......-.|...|..++..+++. .++...=.+.-....++.+...++|.+++. +++.
T Consensus 128 ---Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e 204 (433)
T KOG3810|consen 128 ---YKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLE 204 (433)
T ss_pred ---HHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccch
Confidence 66677777777778888888888777654 344444444444444555556666655421 0000
Q ss_pred --Ccchh--------HHHHHHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEec-cCCChhhHHHHHHHHHHHH
Q 015348 183 --QSNVG--------IRAQLSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQN-LKIRSSVLGISKVFGQAAM 251 (408)
Q Consensus 183 --~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~ 251 (408)
..+.+ ...-.+++....+||.++.-.+...+..+......+.....-.+. -+-.....|..-+...+.+
T Consensus 205 ~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLG 284 (433)
T KOG3810|consen 205 EMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLG 284 (433)
T ss_pred hcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHH
Confidence 00001 111233455667889888877777774444333322111000010 1112233456666667777
Q ss_pred HHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhc
Q 015348 252 LLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVC 330 (408)
Q Consensus 252 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 330 (408)
+++.+..|.+.-++.++.-+.++.....-+.++ ++ ..-....|+.....+..........++ ..-+++..
T Consensus 285 a~~~~~~g~l~i~w~r~g~~ll~~~s~~~agll-f~--------m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL 355 (433)
T KOG3810|consen 285 AIAALAAGYLNINWNRWGDLLLAVGSAVQAGLL-FI--------MAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNL 355 (433)
T ss_pred HHHHHHHHheeeccchhhHHHHHHHHHHhhhhh-hh--------hhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhh
Confidence 788888888876666553333332211111111 11 112233444444444333322222333 55566777
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 331 PPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 331 p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
..|.-|-++|+.+.+.-+ +-.++.-...|.-|
T Consensus 356 ~~e~~gLvFGiNTFvAl~---lQsilT~iVvd~~g 387 (433)
T KOG3810|consen 356 SSELFGLVFGINTFVALI---LQSILTLIVVDDRG 387 (433)
T ss_pred hhhhheeeeehHHHHHHH---HHHhheEEEEcccc
Confidence 778888888887655433 33344444556444
No 253
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.20 E-value=0.0002 Score=68.49 Aligned_cols=160 Identities=16% Similarity=0.104 Sum_probs=114.5
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcc-cccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhcc---------
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANL-PMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQ--------- 72 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~-~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~--------- 72 (408)
+..|+.++++.+..++.-......- .+....+++.++|-+ .||-+.+.++..+..++..+..+...
T Consensus 60 lv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f----~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~ 135 (571)
T KOG1237|consen 60 LVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSF----LGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC 135 (571)
T ss_pred HHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Confidence 4467888999988777766666663 444478899999994 69999999988888777655443221
Q ss_pred ---------Ccc---hHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHH
Q 015348 73 ---------SSI---SIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNL 140 (408)
Q Consensus 73 ---------~~~---~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 140 (408)
... ....+....-+..+|.+...+...+.-+|-.++.++ +....+...+.+++...+.|..++..
T Consensus 136 ~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~---~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 136 KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDP---VEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCc---chhhCcccchhHHHHHHHHHHHHHHH
Confidence 000 123445555666667888788887888888874321 11114568899999999999999998
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHHHHh
Q 015348 141 LVGFAIDRFSPPSMFLFFGLLVVLQFFIT 169 (408)
Q Consensus 141 l~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 169 (408)
+-.+.-+..+|...|.+..+...++.++.
T Consensus 213 ~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 213 VLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 88888888999999998888777765544
No 254
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.20 E-value=1.4e-05 Score=69.76 Aligned_cols=145 Identities=14% Similarity=0.171 Sum_probs=111.1
Q ss_pred hccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 015348 9 DSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLS 87 (408)
Q Consensus 9 ~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (408)
.|-|+|+.+.|...+...+..+. ....-.+++|. .++|+..+.....+.++.+.+.+.+.. +++ ...++.
T Consensus 236 i~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~----~n~r~~~~~~~~~~l~G~~G~~~~P~~--~~~---lw~~ll 306 (395)
T COG2807 236 IDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRS----KNQRPLVVLALLLMLVGLVGLLLAPGQ--LPI---LWALLL 306 (395)
T ss_pred HHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHh----cccchHHHHHHHHHHHHHHHHHHhhhh--HHH---HHHHHH
Confidence 57899999999999988855444 66666778862 578888888888888888888777721 222 125889
Q ss_pred HHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhhHHHHHHHHHHHHH
Q 015348 88 NLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-PPSMFLFFGLLVVLQF 166 (408)
Q Consensus 88 g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-~~~~f~i~~~~~~~~~ 166 (408)
|+|.+...+.....+.+..++.+ +-++..+..+..+.+=..+||.+.|++.|..| |+..........++..
T Consensus 307 G~G~G~~F~laL~li~~rs~~a~--------~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 307 GLGQGGAFPLALTLILLRSSDAA--------IAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred hCccchHHHHHHHHHHhhcCChH--------HHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 99999999988899988887765 57777787777888888889999999998765 8888877766666655
Q ss_pred HHhh
Q 015348 167 FITI 170 (408)
Q Consensus 167 ~~~~ 170 (408)
+.-+
T Consensus 379 i~Gl 382 (395)
T COG2807 379 IFGL 382 (395)
T ss_pred HHHh
Confidence 5443
No 255
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.13 E-value=4.6e-06 Score=72.79 Aligned_cols=125 Identities=11% Similarity=0.074 Sum_probs=90.3
Q ss_pred chheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCcc
Q 015348 33 PLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTS 112 (408)
Q Consensus 33 ~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~ 112 (408)
++.+++.|| .|||+.|..+.+++++..++.......+....++..+|++ ..........+.+|..|..
T Consensus 399 LIt~~iver-----lGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~araf----isg~fqvaYvYtPEVyPTa--- 466 (528)
T KOG0253|consen 399 LITGVIVER-----LGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF----ISGAFQVAYVYTPEVYPTA--- 466 (528)
T ss_pred hHHHHHHHH-----hcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH----HhchheEEEEecCcccchh---
Confidence 578999999 9999999999999999988877766222222333344433 3333444458889999976
Q ss_pred chhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHhhhcccccc
Q 015348 113 SKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFITIAVRESAL 177 (408)
Q Consensus 113 ~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~e~~~ 177 (408)
.|+...+....+.-+|.++.|.++ +....+-..+..+.+.+++++.+...++|-+++
T Consensus 467 ------vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 467 ------VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred ------hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 488888888889999999999998 333344455666777778888887777775443
No 256
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.08 E-value=3.3e-05 Score=65.46 Aligned_cols=129 Identities=12% Similarity=0.000 Sum_probs=83.3
Q ss_pred EEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehh
Q 015348 227 FYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLI 306 (408)
Q Consensus 227 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
+-.++.+|+|.++...+.....++..+| +..|.+.|++|++..+.++.....+.+......+... .. ....+.+.
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~---i~-~~~~~~~~ 100 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR---IP-SLPVWLMC 100 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc---cC-ccchHHHH
Confidence 3456668999999999999999998764 8889999999999998888887777765543322111 11 11222232
Q ss_pred hhHHHHHHHHHhh-hhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 307 FSSLLEVMFFFKI-LPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALA 361 (408)
Q Consensus 307 ~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~ 361 (408)
......+.+.... ........+..| ++||++.|+.-+...+++.+-..+...+.
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 2222222222211 122344457787 57999999999999888776655544433
No 257
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.07 E-value=7.4e-06 Score=73.64 Aligned_cols=160 Identities=15% Similarity=0.201 Sum_probs=105.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcC-ceEeehhhhHHHHH
Q 015348 235 IRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVP-DSLYVLIFSSLLEV 313 (408)
Q Consensus 235 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 313 (408)
+++...+.+.....++.+.|+++.|++.||+|||++.-..++++.++.++..+ ... ...+ ....++...-...|
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~-s~~----~~~~~~~m~~L~~~R~~LG 155 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGL-SVG----TTSPLGVMMTLCFFRFLLG 155 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhcc-CCC----CCCCcchhhHHHHHHHHhh
Confidence 66777888999999999999999999999999999988887777776543111 111 1111 12224444556667
Q ss_pred HHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCC--CCCCCchH-HHHHHHHhhh
Q 015348 314 MFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYT----GVT--GDDFSGLP-LALIIQAVCT 385 (408)
Q Consensus 314 ~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~----g~~--~~~~~~~~-~~~~~~~~~~ 385 (408)
++.++-.|+ .+..+|...++.||+..+..-+++..|...|..++-.+...+ +.. .......| +.+.+.++-.
T Consensus 156 iGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa 235 (538)
T KOG0252|consen 156 IGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPA 235 (538)
T ss_pred ccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 777788899 788899999999999999888888888777776665554433 221 11122333 3344444444
Q ss_pred hhhhhhhhccCCCC
Q 015348 386 ILPLYWSYFMPDGV 399 (408)
Q Consensus 386 ~~~~~~~~~~~~~~ 399 (408)
+..+..-...||++
T Consensus 236 ~~~ly~Rl~M~Et~ 249 (538)
T KOG0252|consen 236 LLVLYFRLKMPETA 249 (538)
T ss_pred HHHHHhhhcCCcch
Confidence 44443444556644
No 258
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.02 E-value=1.2e-07 Score=89.61 Aligned_cols=114 Identities=12% Similarity=0.158 Sum_probs=88.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCc---eEeehhhhHHHH
Q 015348 236 RSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPD---SLYVLIFSSLLE 312 (408)
Q Consensus 236 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 312 (408)
+....++..+...++.++|.++.|.+.||+|||+.+..+..+..+..++.. ..+ +.+.+...-+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~~~R~~~ 112 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIA-----------FAPSYNNFWMLLIGRFLI 112 (451)
T ss_pred hHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc-----------cccccccccccccccccc
Confidence 345677888999999999999999999999999999888777766655422 223 445666666777
Q ss_pred HHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 313 VMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 313 ~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
|++.+...+. ..++.|.+|+++|+...++.+....+|..++..++-.+
T Consensus 113 G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 113 GFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7776666666 88999999999999999998888888877776654433
No 259
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.93 E-value=0.00034 Score=62.77 Aligned_cols=149 Identities=15% Similarity=0.127 Sum_probs=116.4
Q ss_pred hccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 015348 9 DSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLS 87 (408)
Q Consensus 9 ~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (408)
+.||+|+.|...+......+.++ -...|++..| +.++|+.-.+++....++..+..++... .+.+.+....++.
T Consensus 237 ~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~----~~~~~~~a~~G~~~~~~~f~lii~a~~~-~~~~~~~~~~~l~ 311 (403)
T PF03209_consen 237 EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR----RLGKKRTAALGCLLGALAFALIILAGPL-GSPWLFRPGVFLL 311 (403)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCchHHHHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHH
Confidence 45899999999998888877666 4466777664 3778888888888888777765554422 2688889999999
Q ss_pred HHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc----------CChhhHHHH
Q 015348 88 NLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR----------FSPPSMFLF 157 (408)
Q Consensus 88 g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~----------~g~~~~f~i 157 (408)
|++.|......-+.+.+..++++ .|..++.+.....++..+|..++|.+.|. .+|..+|.+
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~---------aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~l 382 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGR---------AGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFAL 382 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcc---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHH
Confidence 99999999999899999988764 88999999999999999999999887653 347777888
Q ss_pred HHHHHHHHHHHhhh
Q 015348 158 FGLLVVLQFFITIA 171 (408)
Q Consensus 158 ~~~~~~~~~~~~~~ 171 (408)
.++..++++.+...
T Consensus 383 Ea~ll~~a~~ll~~ 396 (403)
T PF03209_consen 383 EAVLLLAALVLLGR 396 (403)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777666555433
No 260
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.84 E-value=0.0016 Score=61.19 Aligned_cols=250 Identities=10% Similarity=0.073 Sum_probs=129.9
Q ss_pred CHHHHHHHHHhhcccccc--cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh--cc------C----------
Q 015348 14 DPSTLQLLQNSANLPMVG--KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL--SQ------S---------- 73 (408)
Q Consensus 14 s~~~~g~~~~~~~~~~~~--~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~--~~------~---------- 73 (408)
.++.+..+=....+|..+ ..+...++|| ++|.+++-+....+.....+.++. |. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~-----~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~ 130 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNR-----LSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAIL 130 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhc
Confidence 445555555544444333 6678899999 999988766655555544444432 11 0
Q ss_pred ---------cchHHHHHHHHHHHHHHHHHHH-hhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHH
Q 015348 74 ---------SISIFTMSLFLLLSNLGASIAE-VANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVG 143 (408)
Q Consensus 74 ---------~~~~~~~~~~~~l~g~~~~~~~-~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~ 143 (408)
-.+.|.+.+..+..-+-..... ....++..|..+.+| -.|..+.+..+.++|.+++..+..
T Consensus 131 ~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~e---------AKRfYpl~g~ganigli~sG~~~~ 201 (491)
T PF03219_consen 131 PPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEE---------AKRFYPLFGLGANIGLIFSGQLTS 201 (491)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123334444444444333332 244577788887654 777899999999999999888887
Q ss_pred HHhh---------cCChhhHHHHH----HHHHHHHHHHhhhcc----ccccc------CCCCCcchhHHHHHHHHHHhcc
Q 015348 144 FAID---------RFSPPSMFLFF----GLLVVLQFFITIAVR----ESALK------LPKSQSNVGIRAQLSELSAALR 200 (408)
Q Consensus 144 ~l~~---------~~g~~~~f~i~----~~~~~~~~~~~~~~~----e~~~~------~~~~~~~~~~~~~~~~~~~~~~ 200 (408)
.+.+ ...|...+... .+.+.+.......+. +++.. +++++++.+.++..+. .+|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~~kk~k~k~s~~es~k~---l~k 278 (491)
T PF03219_consen 202 YFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKKKKKKKPKMSLKESFKL---LLK 278 (491)
T ss_pred HHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhcccccCCCccHHHHHHH---HHh
Confidence 7776 12354333221 122222222222222 11111 1111122233444443 377
Q ss_pred cchhHHHHHHHHhhhcccccccceeEEEEEeccCCChh----hHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHH
Q 015348 201 KPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSS----VLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQA 276 (408)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 276 (408)
+|.+..+.+...............+-....+.+. |+. ..|-.....++..++..++.+++.+|+|.+....+.-+
T Consensus 279 S~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPi 357 (491)
T PF03219_consen 279 SKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPI 357 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHH
Confidence 8877766665544222222111111100111111 111 23444555566677777888999999998877666544
Q ss_pred HHHHH
Q 015348 277 MMAVF 281 (408)
Q Consensus 277 ~~~~~ 281 (408)
+..+.
T Consensus 358 v~lit 362 (491)
T PF03219_consen 358 VILIT 362 (491)
T ss_pred HHHHH
Confidence 44443
No 261
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.82 E-value=0.00021 Score=59.84 Aligned_cols=233 Identities=11% Similarity=0.105 Sum_probs=103.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHH-----hhcCChhhHHHHHHHHHHHHHHHhhhcccc--cccCC-CCCcchhHHH
Q 015348 119 SSGELQSFVWMSSSMGGVLGNLLVGFA-----IDRFSPPSMFLFFGLLVVLQFFITIAVRES--ALKLP-KSQSNVGIRA 190 (408)
Q Consensus 119 ~~g~~~~~~~~~~~~g~~ig~~l~~~l-----~~~~g~~~~f~i~~~~~~~~~~~~~~~~e~--~~~~~-~~~~~~~~~~ 190 (408)
+|+........+.++|.++....--.- ...-+|++.+.+.+++.++-++....+-++ ...+. ++++++...+
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~~ 82 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTLS 82 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccccccccccc
Confidence 466666655667788877764431111 112459999988887776665554433221 11111 1111111111
Q ss_pred HHHHHHHhcccchhHHHHHHHHhhhccccccc---ceeEEEEEec--cCC----Chh----hHHHHHHHHHHHHHHHHHH
Q 015348 191 QLSELSAALRKPEIMYSVAWFAASYSIIPVLT---GTMFFYQTQN--LKI----RSS----VLGISKVFGQAAMLLWGVI 257 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~g~----~~~----~~g~~~~~~~~~~~~~~~~ 257 (408)
......+.+|+|..|...+..-. +....... .....+ ... .+. +.. .......+...+..+|.+.
T Consensus 83 ~~~s~~~~LK~K~tw~w~~~Yg~-wLv~~V~p~t~~~~~~~-~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~ 160 (267)
T PF07672_consen 83 KKPSYKSILKEKETWKWILIYGI-WLVVVVFPFTPSWFNIL-IWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFT 160 (267)
T ss_pred ccchHHHHHccchHHHHHHHHHH-HheeEEEeccchhHhHh-hhcCcccccccccccccchhhHHHHHHHHHHHhhhcee
Confidence 22445566999998887665544 22111111 111000 000 111 011 1123344444555566666
Q ss_pred HHHhhccCCCceehHHHHHHHHHHH-HHhHhhhcccccccCcCce--EeehhhhHHHHHHHHHhhhhH-HHHHHHh--cC
Q 015348 258 YNSGLKSVSPRKLISAIQAMMAVFM-ISDVLFVKGVYREMGVPDS--LYVLIFSSLLEVMFFFKILPF-SVYIAQV--CP 331 (408)
Q Consensus 258 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~p 331 (408)
.|++.+..-+||......+...+.. .+....... .+..+. .....+..++.|...-+..+. ..+-.|. ..
T Consensus 161 ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~----~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~ 236 (267)
T PF07672_consen 161 IGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYF----VGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEYKGYN 236 (267)
T ss_pred eccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH----hCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhhcCCC
Confidence 6776654444444444333322221 111111100 111111 112223333334433333344 3333333 45
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHH
Q 015348 332 PGCEGSIMAFVMSAVALAFIVSGYLG 357 (408)
Q Consensus 332 ~~~~g~~~g~~~~~~~lg~~ig~~~~ 357 (408)
|++.|..+|+.-.++.+.-.+.-++.
T Consensus 237 pk~ig~~Fg~iWGfGY~~yTi~~Ii~ 262 (267)
T PF07672_consen 237 PKKIGIQFGLIWGFGYIFYTIYDIIL 262 (267)
T ss_pred cceehhHHHHHHHHHHHHHHHHHHHH
Confidence 56778888887766666555544443
No 262
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.59 E-value=3.7e-05 Score=52.16 Aligned_cols=50 Identities=26% Similarity=0.479 Sum_probs=40.3
Q ss_pred hhhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHH
Q 015348 3 VNFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAF 58 (408)
Q Consensus 3 ~~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~ 58 (408)
++.|++ +.|+|+.|+|.+.++..+..++ +|++|.++|| ++|++.++....
T Consensus 23 l~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-----~~~~~~~l~~~~ 73 (77)
T PF12832_consen 23 LPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-----FGKRKVILLGSL 73 (77)
T ss_pred hhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCccHHHHHHHH
Confidence 456774 6999999999999998866666 9999999999 777776665543
No 263
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.58 E-value=0.00065 Score=63.37 Aligned_cols=134 Identities=13% Similarity=0.192 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhHHHH
Q 015348 246 FGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPFSVY 325 (408)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (408)
..++..++.+...|.++||+|||..+........+......+ ..+|..+. .-..+.....+....++
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~------------~~~~~~~~-~~l~g~~~~~~s~~~a~ 136 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF------------QGYWFFLL-LGLSGGFSAIFSVGFAY 136 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH------------HHHHHhhh-cccccchhhhhhhhhhh
Confidence 457788888999999999999998887776655554333222 11111111 11112222233344778
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhhhhhhhh-hhccCCCCC
Q 015348 326 IAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCTILPLYW-SYFMPDGVK 400 (408)
Q Consensus 326 ~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 400 (408)
+++...++.|...+|+.+.....+..++|.+++.+.+..|. ...+.+.....++.... ...+||+..
T Consensus 137 vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~--------a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 137 VADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI--------ALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred eeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc--------hHHHHHHHHHHHHHHHHHhhccccccC
Confidence 99999999999999999999999999999999999998664 23334444444433333 345566543
No 264
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.40 E-value=0.00025 Score=48.12 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=48.2
Q ss_pred hcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHH
Q 015348 215 YSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQA 276 (408)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 276 (408)
+..........+.|.. +.|+|+.+.|++.++..+..+++.+++|.++||.++++.......
T Consensus 13 f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 13 FAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3344444455555555 489999999999999999999999999999999998887765543
No 265
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.40 E-value=0.0011 Score=51.82 Aligned_cols=95 Identities=14% Similarity=0.155 Sum_probs=76.6
Q ss_pred cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCc
Q 015348 32 KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMT 111 (408)
Q Consensus 32 ~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~ 111 (408)
.++.+.+.++ .|.|+.++++.+...+-... .+.+ +.+.++..-.+.|++.+..+++...++.+..++++
T Consensus 54 ~l~~P~iv~~-----lg~K~sm~lg~~~y~~y~~~-~~~~----~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~- 122 (156)
T PF05978_consen 54 CLFAPSIVNK-----LGPKWSMILGSLGYAIYIAS-FFYP----NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET- 122 (156)
T ss_pred HHhHHHHHHH-----HhhHHHHHHHHHHHHHHHHH-HHhh----hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH-
Confidence 5566678899 99999999998887754443 3455 78888999999999999999999899988877653
Q ss_pred cchhhccCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 015348 112 SSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFA 145 (408)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l 145 (408)
+++..++.....+.+.++|.++.-.+
T Consensus 123 --------~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 123 --------IGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred --------HhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888888888887765544
No 266
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.35 E-value=0.0016 Score=59.04 Aligned_cols=126 Identities=13% Similarity=-0.021 Sum_probs=81.6
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEe--ehhhhHH
Q 015348 233 LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLY--VLIFSSL 310 (408)
Q Consensus 233 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 310 (408)
+| +....-+...++.+..+...+..-|+.||+|.|.....+.....+....-..-.. -..++..+ .......
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~-----p~v~~~f~~~l~~~Gq~ 148 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSL-----PFVPPLFRRPLTHTGQS 148 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccC-----ccccccchhhhhHHhHH
Confidence 55 5556668888999999999999999999999999998888877776554322000 01112221 2222233
Q ss_pred HHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015348 311 LEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYT 364 (408)
Q Consensus 311 ~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~ 364 (408)
..+..+...+.. .=+..--.|+++|+++..+-...+.+|..+|.++...+..+-
T Consensus 149 iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 149 IAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 333333322222 122334589999999988888888888888888877776554
No 267
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.34 E-value=2.7e-05 Score=74.26 Aligned_cols=169 Identities=14% Similarity=0.087 Sum_probs=2.4
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHh---hhcccc--c-c------
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVL---FVKGVY--R-E------ 295 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~-~------ 295 (408)
-..+.++++..+.|++.+.+-++.++..++..++.+|.+|-|.+..+.+++++..++..+ +..... . .
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~ 107 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNS 107 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccc
Confidence 355668999999999999999999999999999999887778888887777776443221 111100 0 0
Q ss_pred -----c----------------------CcCceEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHH
Q 015348 296 -----M----------------------GVPDSLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVA 347 (408)
Q Consensus 296 -----~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~ 347 (408)
. .....++++++..++.|++.....+. .+++-|.++++..+.+.|+..++..
T Consensus 108 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~ 187 (539)
T PF03137_consen 108 SISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSI 187 (539)
T ss_dssp --------------------------------------------SSS---------------------------------
T ss_pred ccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhh
Confidence 0 00012345556677778888777888 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc-CC----------C--CCCC-CchHHHHHHHHhhhhhhhhhhhccC
Q 015348 348 LAFIVSGYLGVALASYT-GV----------T--GDDF-SGLPLALIIQAVCTILPLYWSYFMP 396 (408)
Q Consensus 348 lg~~ig~~~~g~l~~~~-g~----------~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (408)
+|-.+|-.+++...+.. .. + ...| +.+|+.+++++.+.++..+.+...|
T Consensus 188 lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FP 250 (539)
T PF03137_consen 188 LGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFP 250 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred ccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999988888776542 11 1 1223 3456666666665555444444444
No 268
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=97.26 E-value=0.0096 Score=52.59 Aligned_cols=153 Identities=18% Similarity=0.153 Sum_probs=84.2
Q ss_pred chhhhhhhccCCCHHHHHHHHHhhc-ccccccchheeecccccccCCcchhHHHHHHHHHHHHHHHH------HHhcc--
Q 015348 2 AVNFFLKDSLNVDPSTLQLLQNSAN-LPMVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAI------AILSQ-- 72 (408)
Q Consensus 2 ~~~~~l~~~l~~s~~~~g~~~~~~~-~~~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~------~~~~~-- 72 (408)
+++.|+.+-.|-|-...+....+-. ...++.|+.|-..|+ ..|+|++.....+.=++.... .+...
T Consensus 49 ~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg-----~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~ 123 (503)
T KOG2601|consen 49 SVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDG-----MSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDL 123 (503)
T ss_pred HHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcc-----hhHHHHHHHHHhhccHHHHHHHHHHhhheeecch
Confidence 5666774434423333332222223 334558999999999 999998877655433322222 22221
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhHHHH--H--Hhhc----cCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 015348 73 SSISIFTMSLFLLLSNLGASIAEVANDAL--V--AEMA----KQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGF 144 (408)
Q Consensus 73 ~~~~~~~~~~~~~l~g~~~~~~~~~~~a~--i--~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~ 144 (408)
...+..++..+.++.....+.......+- + .||. ..++. + ...+.++.....-....++.|...|.
T Consensus 124 ~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~-s-----~lt~mnatir~iDq~tn~Lapv~tg~ 197 (503)
T KOG2601|consen 124 KSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESP-S-----VLTNMNATIRGIDQSTNLLAPVITGL 197 (503)
T ss_pred hcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCH-H-----HHhhcchhhhhhhhhhhchhhhhhcc
Confidence 11244455666666555544443332221 1 1111 22221 1 24445566666777888999999999
Q ss_pred HhhcCChhhHHHHHHHHHHHH
Q 015348 145 AIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 145 l~~~~g~~~~f~i~~~~~~~~ 165 (408)
+.+..+.|..-...++..++.
T Consensus 198 Iitfvsl~~~~g~f~~w~~vs 218 (503)
T KOG2601|consen 198 IITFVSLRASAGTFAAWALVS 218 (503)
T ss_pred cceeechhhhhhhhHHHHHHH
Confidence 998888887665555555553
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.25 E-value=0.024 Score=53.08 Aligned_cols=128 Identities=12% Similarity=0.114 Sum_probs=78.8
Q ss_pred ChhhHHHHHHHHHHHHHHH-HHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhccccccc-----------CcCc---
Q 015348 236 RSSVLGISKVFGQAAMLLW-GVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREM-----------GVPD--- 300 (408)
Q Consensus 236 ~~~~~g~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~--- 300 (408)
+.+...++-....+.+.+. .++.+++++|+++++.+............+............ ..+.
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4467777776665655555 888999999999998887665555544333222111111000 0000
Q ss_pred ------eEeehhhhHHHHHHHHHhhhh-H-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015348 301 ------SLYVLIFSSLLEVMFFFKILP-F-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASY 363 (408)
Q Consensus 301 ------~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~ 363 (408)
..|......+..-+....... . +++++|.+.+++..|.+++.....++|..+++.+..++.+.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 011111111122222222233 4 88999999999999999999999999999999888888753
No 270
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.20 E-value=0.00059 Score=46.74 Aligned_cols=63 Identities=14% Similarity=0.088 Sum_probs=57.2
Q ss_pred hhhhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhc
Q 015348 4 NFFLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILS 71 (408)
Q Consensus 4 ~~~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~ 71 (408)
-..+++|.++|.++.|++.+...++|.+ .+....+.++ .++++.+..+.+...+..+.+++.+
T Consensus 15 LP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 15 LPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-----SRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999 7888888888 8888999999999999999999888
No 271
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.19 E-value=0.11 Score=48.08 Aligned_cols=258 Identities=13% Similarity=0.119 Sum_probs=137.2
Q ss_pred hhhccCC---CHHHHHHHHHhhcccccc--cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC--------
Q 015348 7 LKDSLNV---DPSTLQLLQNSANLPMVG--KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS-------- 73 (408)
Q Consensus 7 l~~~l~~---s~~~~g~~~~~~~~~~~~--~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~-------- 73 (408)
++|.+.+ .++.+.++-+..-+|..+ .++.+.+.++ ..|.+++-.-...+....+++++.-.+
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~-----lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~ 123 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNI-----LTREKVFYIILGFFLGFFALFAFVIYPYKDILHPD 123 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhh-----cCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Confidence 3444443 456667766666665433 7889999999 889888777766666666666643320
Q ss_pred -----------c---------chHHHHHHHHHHHHHHHHHHHh-hHHHHHHhhccCCCccchhhccCcchhHHHHHHHHH
Q 015348 74 -----------S---------ISIFTMSLFLLLSNLGASIAEV-ANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSS 132 (408)
Q Consensus 74 -----------~---------~~~~~~~~~~~l~g~~~~~~~~-~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 132 (408)
. .+.|.......+.-+-.+.... .......|..+.+| -.|..+.++...+
T Consensus 124 ~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~e---------akRFy~lf~l~~n 194 (509)
T COG3202 124 PEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEE---------AKRFYPLFGLGAN 194 (509)
T ss_pred HHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH---------hhhhHHHHHHHHH
Confidence 0 1225555555555554444433 45577788877654 7788999999999
Q ss_pred HHHHHHHHHHHHHhhcC-C---------hhhHHHHHHHHHHHHHHHhhhc----ccccc---cCCCCCc----chhHHHH
Q 015348 133 MGGVLGNLLVGFAIDRF-S---------PPSMFLFFGLLVVLQFFITIAV----RESAL---KLPKSQS----NVGIRAQ 191 (408)
Q Consensus 133 ~g~~ig~~l~~~l~~~~-g---------~~~~f~i~~~~~~~~~~~~~~~----~e~~~---~~~~~~~----~~~~~~~ 191 (408)
++..++..+..++.++. . .+..+.+.+....+......++ .+++. +..++++ +.+..+.
T Consensus 195 i~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s 274 (509)
T COG3202 195 ISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIES 274 (509)
T ss_pred HHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHH
Confidence 99888888877776531 1 2333444444334443333332 22222 1111111 1223333
Q ss_pred HHHHHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCC---hhhHHHHHHHHHHH-HHHHHHHHHHhhccCCC
Q 015348 192 LSELSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIR---SSVLGISKVFGQAA-MLLWGVIYNSGLKSVSP 267 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~~ 267 (408)
.+. ..+.|.++...+...+.+.........+-.-.++..... ....|......++. .++.....+.+.+|.|.
T Consensus 275 ~k~---i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW 351 (509)
T COG3202 275 FKM---ILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGW 351 (509)
T ss_pred HHH---HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhH
Confidence 333 367777666665555433322222111100000001111 12233334444444 55666778889999887
Q ss_pred ceehHHHHHHHHHH
Q 015348 268 RKLISAIQAMMAVF 281 (408)
Q Consensus 268 ~~~~~~~~~~~~~~ 281 (408)
...-.+.-++..+.
T Consensus 352 ~~~AlitPiv~lit 365 (509)
T COG3202 352 FTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHH
Confidence 65554444444443
No 272
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.16 E-value=0.00032 Score=59.89 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=78.1
Q ss_pred ccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhh
Q 015348 27 LPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEM 105 (408)
Q Consensus 27 ~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~ 105 (408)
+|.+. +...-...||+| ++.|..+ ...+.+.++++.+++. +.+.-+....+..++.|+.....-++-+.+
T Consensus 73 lPsL~iKl~~Pff~~rfp---f~~Ri~~--~v~~sa~s~~lVafs~----s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 73 LPSLAIKLTAPFFIHRFP---FGFRIAL--VVLLSALSFFLVAFSN----SVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred hHHHHHHHhchhhhhhcc---cchHHHH--HHHHHhcceEEEEecc----chhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 55554 667777888965 7777544 3456677777777887 899989999999999988877554443322
Q ss_pred ccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhh--cCChhhHHHHHHHHHHHHHHHhhh-cccc
Q 015348 106 AKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAID--RFSPPSMFLFFGLLVVLQFFITIA-VRES 175 (408)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~--~~g~~~~f~i~~~~~~~~~~~~~~-~~e~ 175 (408)
++.. .+.+..+...++++|..--..+.+ ..+.|...++...+.++.....++ ++++
T Consensus 144 -~~~~-------------i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 144 -PSIV-------------IAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred -CCce-------------eccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 2211 222222333444555544444444 356788888888777766655554 5544
No 273
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.15 E-value=0.0076 Score=47.16 Aligned_cols=105 Identities=10% Similarity=0.031 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHHhhhhH-
Q 015348 244 KVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFFKILPF- 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (408)
..+......+..++.+.+.++.|.|+.+.++.+...+.....+. ...+.+.......|++.......
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~------------~~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY------------PNSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHHHHHhhhhHHhhHhh
Confidence 34444455566677788888999999998888777655443221 12235566667777776655555
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 323 SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVAL 360 (408)
Q Consensus 323 ~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l 360 (408)
..++.+..+++.+++..|+...+.+.+..+|+...-.+
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999998888887665444
No 274
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.85 E-value=0.011 Score=57.93 Aligned_cols=157 Identities=16% Similarity=0.026 Sum_probs=87.7
Q ss_pred eccCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc-CCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhH
Q 015348 231 QNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKS-VSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSS 309 (408)
Q Consensus 231 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
+.+|++......+........-+...+.+.+.|+ +|+++.+..+.++..+...+... ........ +..........
T Consensus 16 ~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai--~a~~~~~~-~~~~~~~l~gL 92 (654)
T TIGR00926 16 NFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF--GAIPSSGH-PLHDLLDLLGL 92 (654)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh--ccCccccc-chHHHHHHHHH
Confidence 3467777766655555555555556666777775 68888887777776665443221 00000000 00001122233
Q ss_pred HHHHHHHHhhhhH-HHHHHHhcCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHHHHHhhh
Q 015348 310 LLEVMFFFKILPF-SVYIAQVCPPG---CEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALIIQAVCT 385 (408)
Q Consensus 310 ~~~~~~~~~~~~~-~~~~~~~~p~~---~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 385 (408)
.+...|.+..-|. .+...+..+++ .+-+.+.++....|+|+.+++.+.+++.+..+-.. .+..++..+.+++++.
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg-~~~~~~~aF~i~~i~m 171 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFG-CQDCYPLAFGVPAILM 171 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-cCcchHHHHHHHHHHH
Confidence 3344455555566 67777777653 36677888888899999999999998876542110 1122344555555554
Q ss_pred hhhhhh
Q 015348 386 ILPLYW 391 (408)
Q Consensus 386 ~~~~~~ 391 (408)
+++++.
T Consensus 172 ~ia~lv 177 (654)
T TIGR00926 172 ILALIV 177 (654)
T ss_pred HHHHHH
Confidence 444433
No 275
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.72 E-value=0.0023 Score=62.06 Aligned_cols=173 Identities=14% Similarity=0.062 Sum_probs=122.4
Q ss_pred EEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhh---hcccc-----------
Q 015348 228 YQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLF---VKGVY----------- 293 (408)
Q Consensus 228 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------- 293 (408)
...+.++++.++.|++...+-++..+...+..++..|..+-+.+-++.+++++..++..+- .....
T Consensus 122 tiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~ 201 (735)
T KOG3626|consen 122 TIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVE 201 (735)
T ss_pred hhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcccc
Confidence 3455689999999999988999999999999999999888888888888877764443221 10000
Q ss_pred cc--------------c------C-----cCc--eEeehhhhHHHHHHHHHhhhhH-HHHHHHhcCCchhHHHHHHHHHH
Q 015348 294 RE--------------M------G-----VPD--SLYVLIFSSLLEVMFFFKILPF-SVYIAQVCPPGCEGSIMAFVMSA 345 (408)
Q Consensus 294 ~~--------------~------~-----~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~ 345 (408)
.. . . -.+ .+..++...++.|+|.....|. .+++-|.+.+++...+.|+..++
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~ 281 (735)
T KOG3626|consen 202 NPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSM 281 (735)
T ss_pred CCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHH
Confidence 00 0 0 000 1223445566777777777777 88999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcC-C-------C--CCCC-CchHHHHHHHHhhhhhhhhhhhccCCCCC
Q 015348 346 VALAFIVSGYLGVALASYTG-V-------T--GDDF-SGLPLALIIQAVCTILPLYWSYFMPDGVK 400 (408)
Q Consensus 346 ~~lg~~ig~~~~g~l~~~~g-~-------~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (408)
..+|=++|-++++.+.+..- . + ...| +.+|+.+++++.+.+++.+.++..|++.+
T Consensus 282 ~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 282 AILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 99999999888888876431 1 1 1223 34567788888888877777777776544
No 276
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.66 E-value=0.017 Score=54.15 Aligned_cols=135 Identities=14% Similarity=0.135 Sum_probs=77.9
Q ss_pred EEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCC----Ccee-hHHHHHHHHHHHHHhHhhhcccccccCcCc
Q 015348 226 FFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVS----PRKL-ISAIQAMMAVFMISDVLFVKGVYREMGVPD 300 (408)
Q Consensus 226 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (408)
.+|+++++|.++.+.........+.-. ..++.|.++|-+. |||. +.++.++..+....... ... ...
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~-~~~------~~~ 84 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL-LPA------SES 84 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh-ccc------ccc
Confidence 345677899999998877766655443 3567889999863 4444 34444443322222111 010 001
Q ss_pred eEeehhhhHHHHHHHHHhh-hhHHHHHHHhcCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 015348 301 SLYVLIFSSLLEVMFFFKI-LPFSVYIAQVCPP--GCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTG 368 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~--~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~ 368 (408)
.........+...++.... ....++..|...+ +.+|...+.......+|+.++..++|.+.+..+...
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~ 155 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQG 155 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeE
Confidence 1111222222233332222 2335566666422 337888999999999999999999999998876543
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.35 E-value=0.92 Score=42.51 Aligned_cols=115 Identities=10% Similarity=-0.017 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCc-eehHHHHHHHHHHHHHhHhhhcccc-ccc--CcCceEeehhhhHHHHHHH
Q 015348 240 LGISKVFGQAAMLLWGVIYNSGLKSVSPR-KLISAIQAMMAVFMISDVLFVKGVY-REM--GVPDSLYVLIFSSLLEVMF 315 (408)
Q Consensus 240 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 315 (408)
.-.......++-.+|..+..+..- -++| +.+.+..+.-.+ .+..+++....+ ... .+++.+ ..++..+..++.
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~i-FIPlf~lcn~~~~~~~p~~~~~d~-~~~~~~~l~glt 385 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVL-FIPLFLLCNYPQRSRLPVFFPGDA-YFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHH-HHHHHHHhcCCccccCCeeecccH-HHHHHHHHHHHh
Confidence 345677788899999886654321 1112 122222222111 122112111111 000 122222 333345555555
Q ss_pred HHhhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 015348 316 FFKILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLG 357 (408)
Q Consensus 316 ~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~ 357 (408)
.+-.... ..+..+.+++++|-.+-.+.+....+|-.+|..++
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544444 55666777777777776666666777777776653
No 278
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.02 E-value=0.49 Score=44.84 Aligned_cols=127 Identities=17% Similarity=0.159 Sum_probs=75.2
Q ss_pred ChhhHHHHHHHHHH-HHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcC-----------ce--
Q 015348 236 RSSVLGISKVFGQA-AMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVP-----------DS-- 301 (408)
Q Consensus 236 ~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-- 301 (408)
+++....+-....+ +.++...+..++.+++++.+++............+..++.......+..+ ..
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 56666666543333 45666778899999999998877665554444332221111111000000 00
Q ss_pred Eeehh----hhHHHHHHHH---Hhhhh-H-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015348 302 LYVLI----FSSLLEVMFF---FKILP-F-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS 362 (408)
Q Consensus 302 ~~~~~----~~~~~~~~~~---~~~~~-~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~ 362 (408)
++..+ ...+.+...+ ....+ . +.++.|.++.++..+.+++.....++|..+++.+...+.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0111222221 12223 3 8899999999999999999999999999999988888887
No 279
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.97 E-value=0.14 Score=44.81 Aligned_cols=117 Identities=16% Similarity=0.062 Sum_probs=77.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
...++......+...++.++.|++.||.|+|+.+..+........+.... ... ...+.........+++.+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~g~~~~ 109 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL--------APN-VGLALLLILRLLQGLGGG 109 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh--------Ccc-chHHHHHHHHHHHHhhhH
Confidence 46777788888888888899999999998886665555432222111111 000 112223333333555555
Q ss_pred hhhhH-HHHHHHhcCC-chhHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Q 015348 318 KILPF-SVYIAQVCPP-GCEGSIMAFVMS-AVALAFIVSGYLGVALASY 363 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~-~~~g~~~g~~~~-~~~lg~~ig~~~~g~l~~~ 363 (408)
...|. .++..+..|+ +.++...+.... ...++..+++.+++.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 110 GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666 8889999988 678888888888 5778888999888888776
No 280
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.85 E-value=0.23 Score=42.29 Aligned_cols=134 Identities=15% Similarity=0.132 Sum_probs=81.3
Q ss_pred ceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceE
Q 015348 223 GTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSL 302 (408)
Q Consensus 223 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (408)
....+|..+.+|+...++|.+...+....++...+.|.+.||-|||+.-..-.+...+.++. -.+..+
T Consensus 57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT------------KhSpqY 124 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT------------KHSPQY 124 (454)
T ss_pred CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh------------hcCCce
Confidence 34455666778999999998888877777888888899999999998654444444443332 112333
Q ss_pred eehhhhHHHHHHHHHhhhhH--HHHHHHhcCC-----chhHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCC
Q 015348 303 YVLIFSSLLEVMFFFKILPF--SVYIAQVCPP-----GCEGSIMAFVMSA-VALAFIVSGYLGVALASYTGVTG 368 (408)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~-----~~~g~~~g~~~~~-~~lg~~ig~~~~g~l~~~~g~~~ 368 (408)
.++.+.-...|+........ .=++.|+.++ +-....++=...+ +.+-..+++..+-.+.|.++..+
T Consensus 125 kVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGP 198 (454)
T KOG4332|consen 125 KVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGP 198 (454)
T ss_pred EEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCC
Confidence 35555555555554433333 2255666532 2223334433333 33556677777778888887644
No 281
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.50 E-value=0.17 Score=47.08 Aligned_cols=119 Identities=15% Similarity=0.192 Sum_probs=80.3
Q ss_pred CCCHHHHHHHHHhhc-ccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccC--------------cc
Q 015348 12 NVDPSTLQLLQNSAN-LPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQS--------------SI 75 (408)
Q Consensus 12 ~~s~~~~g~~~~~~~-~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~--------------~~ 75 (408)
+.+....-.+.++.. .+.+. ..+.+.+.+| +|++||++.+.++..+..+..++.....+. ..
T Consensus 274 ~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~r--ir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~ 351 (461)
T KOG3098|consen 274 GSNTTYLIAIYSIGIGLGEVIGGLDFSILSKR--IRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP 351 (461)
T ss_pred cCcchhHHHHHHHHHhHHHHHHHHHHHHHhhh--hhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence 334433333333333 44444 6777888877 566899999999988887777766544321 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHH
Q 015348 76 SIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLV 142 (408)
Q Consensus 76 ~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~ 142 (408)
+.....+.-++.|++.+..+......+.+..|++ |..+.++...-..++..++-...
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~----------~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYVIIALLYPDD----------RAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc----------hHHHHHHHHHHHHHHHHHHhhhh
Confidence 4667778889999999999999988998888542 66667766666666665544443
No 282
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.44 E-value=0.58 Score=42.94 Aligned_cols=130 Identities=12% Similarity=0.080 Sum_probs=84.2
Q ss_pred eEEEEEec-cCCChhhHH-HHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceE
Q 015348 225 MFFYQTQN-LKIRSSVLG-ISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSL 302 (408)
Q Consensus 225 ~~~~~~~~-~g~~~~~~g-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (408)
..+|+.+. .|++.++.. -+.-...=..++..+....+.|..+.|.+++...+...+...+.++ + ...
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~---------~--~sv 94 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF---------G--TSV 94 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH---------H--CcH
Confidence 33444444 788887765 2222222334445556667889999998888777665555444322 1 333
Q ss_pred eehhhhHHHHHHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015348 303 YVLIFSSLLEVMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTG 365 (408)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g 365 (408)
..+-...+..|+....-....+++-..+|+++--++.+...+..-+|..++..++-.+...-+
T Consensus 95 ~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~ 157 (412)
T PF01770_consen 95 LAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG 157 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344455566666666555557777778899988899998888888888888888776665433
No 283
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.26 E-value=1.2 Score=41.60 Aligned_cols=130 Identities=12% Similarity=0.178 Sum_probs=80.7
Q ss_pred CChhhHHHHHHHHHH-HHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcc----cccc------c--CcC-c
Q 015348 235 IRSSVLGISKVFGQA-AMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKG----VYRE------M--GVP-D 300 (408)
Q Consensus 235 ~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------~--~~~-~ 300 (408)
.+++....+-...-+ ++++..++..++.++..+.+++...........++..+.... .|.. + ..+ .
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 456777777666555 677888899999999998888766555544443332222111 1111 0 112 1
Q ss_pred eEeeh-----hhhHHHHHHHH---Hhhhh-H-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015348 301 SLYVL-----IFSSLLEVMFF---FKILP-F-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYT 364 (408)
Q Consensus 301 ~~~~~-----~~~~~~~~~~~---~~~~~-~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~ 364 (408)
..+.+ ....+.+.+.+ ..... + +....|++..++..+.+++++...+++..+++.+..++.++.
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 11111 12233333332 11222 3 778899999999999999999999999999888888887643
No 284
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.17 E-value=0.049 Score=37.42 Aligned_cols=60 Identities=12% Similarity=0.063 Sum_probs=49.3
Q ss_pred eEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHH
Q 015348 225 MFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMIS 284 (408)
Q Consensus 225 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 284 (408)
..|.+.++.++|..+.|++.+.+.++.++|.+...++.++.+.++.+..+.+...+....
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 344567778999999999999999999999999999998877778787777666665444
No 285
>PRK03612 spermidine synthase; Provisional
Probab=93.60 E-value=1.6 Score=41.94 Aligned_cols=144 Identities=15% Similarity=0.119 Sum_probs=74.2
Q ss_pred hhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHH---HHHHHHHHHHhc-cCcchHHHHH
Q 015348 7 LKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFL---QAVSWLAIAILS-QSSISIFTMS 81 (408)
Q Consensus 7 l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~ 81 (408)
+..-+|-+..+.+.+.+++..+..+ +.+.|.+.++ ..|+ ....-..+ ..++..+..... .........+
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-----~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~ 114 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-----AAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLY 114 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-----HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445678888888888888877666 5555655533 2222 22111111 111111111111 0000112223
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh-hcCChhhHHHHHHH
Q 015348 82 LFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAI-DRFSPPSMFLFFGL 160 (408)
Q Consensus 82 ~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~-~~~g~~~~f~i~~~ 160 (408)
...++.++..|...|....+..+..++ +-|+..+..+....+|.++|.++.+++. ..+|-....++.+.
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~~~----------~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~ 184 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIRDQ----------HLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGS 184 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc----------chhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 334455666666666553433322111 1345556666699999999999888765 46786555555555
Q ss_pred HHHHHH
Q 015348 161 LVVLQF 166 (408)
Q Consensus 161 ~~~~~~ 166 (408)
+.++..
T Consensus 185 l~~~~a 190 (521)
T PRK03612 185 LNLLAA 190 (521)
T ss_pred HHHHHH
Confidence 544443
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.37 E-value=0.5 Score=43.35 Aligned_cols=82 Identities=17% Similarity=0.070 Sum_probs=58.5
Q ss_pred ehhhhHHHHHHHHHhhhhH-HHHHHHhcCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchHHHHH
Q 015348 304 VLIFSSLLEVMFFFKILPF-SVYIAQVCPPG---CEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGDDFSGLPLALI 379 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~---~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~ 379 (408)
.+.......++|.+..=|. ..+..|..+++ ++.+.+..+....|+|..++....+++.+..|+ ...+.
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~--------~~~f~ 106 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGW--------FLGFG 106 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-H--------HHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccch--------hhhhh
Confidence 4555566667777777777 78888887765 566778888888999999999999999876653 44555
Q ss_pred HHHhhhhhhhhhhh
Q 015348 380 IQAVCTILPLYWSY 393 (408)
Q Consensus 380 ~~~~~~~~~~~~~~ 393 (408)
++.++.++++..+.
T Consensus 107 i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 107 IPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66665555555444
No 287
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.19 E-value=0.026 Score=51.51 Aligned_cols=129 Identities=12% Similarity=0.032 Sum_probs=80.7
Q ss_pred EeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhcc----CCCceehHHHHHHHHHHHHHhHhhhcccccccCcC----ce
Q 015348 230 TQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKS----VSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVP----DS 301 (408)
Q Consensus 230 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 301 (408)
.+.+|.+.+..+.+.....+.+++..++.|..+|| +||||..+..........+............++-. ..
T Consensus 59 l~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~ 138 (498)
T KOG0637|consen 59 LQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVK 138 (498)
T ss_pred HHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccc
Confidence 34589999999999999999999999999999886 68888776665444443222111111111111111 11
Q ss_pred EeehhhhHHHH----HHHHHhhhhHHHHHHHhcCCchhHH-HHHHHHHHHHHHHHHHHHHHH
Q 015348 302 LYVLIFSSLLE----VMFFFKILPFSVYIAQVCPPGCEGS-IMAFVMSAVALAFIVSGYLGV 358 (408)
Q Consensus 302 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~g~-~~g~~~~~~~lg~~ig~~~~g 358 (408)
...+....+.. ........|.-++..+.+.++++-+ +++.+..+..+|+.+|-.+++
T Consensus 139 ~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 139 PRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 11222222222 2233445577888999988777777 888888888888888776665
No 288
>PRK03612 spermidine synthase; Provisional
Probab=93.02 E-value=0.5 Score=45.35 Aligned_cols=131 Identities=16% Similarity=0.041 Sum_probs=65.0
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHHHHHhHhhhcccccccCcCceEeehhhhHHHH
Q 015348 233 LKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVFMISDVLFVKGVYREMGVPDSLYVLIFSSLLE 312 (408)
Q Consensus 233 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
+|-+....+.+.+....+..+|+.+.+++.++.. ++....-..+..+..+....+..... +.. ..........+..
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~-~~~~~~e~~i~l~~~~~~~ll~~~~~--~~~-~~~~~~~~~~~~~ 120 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAA-AGFVAVELLLALLGGLSALILYAAFA--FQG-LSRLLLYVLVLLI 120 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHH-HHHHHHHHHHHHH
Confidence 5777778888888888888899988887763322 22111111111111111111000000 000 0000111112222
Q ss_pred HHHHHhhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCC
Q 015348 313 VMFFFKILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALAS-YTGVT 367 (408)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~-~~g~~ 367 (408)
++..+...|..+-+.+....+..|+..|-......+|+.+|+++.+++.- .+|..
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred HHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence 33334445652222222222335666777888889999999998887654 66654
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=90.68 E-value=14 Score=34.08 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHhh
Q 015348 76 SIFTMSLFLLLSNLGASIAEVANDALVAEM 105 (408)
Q Consensus 76 ~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~ 105 (408)
.++..++..++.+.+.+..+........+.
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~ 145 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLF 145 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcC
Confidence 566666777778888887776554544443
No 290
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=90.23 E-value=2.5 Score=39.40 Aligned_cols=123 Identities=17% Similarity=0.092 Sum_probs=85.6
Q ss_pred hhhhccCCCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHH---HHhccC---cchHH
Q 015348 6 FLKDSLNVDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAI---AILSQS---SISIF 78 (408)
Q Consensus 6 ~l~~~l~~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~---~~~~~~---~~~~~ 78 (408)
|++.+ |+|+.++|..-+...+..+. .....++.+| +|..+.-.++......+..++ .+.+.. ..+..
T Consensus 284 yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-----iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~ 357 (432)
T PF06963_consen 284 YLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-----IGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAY 357 (432)
T ss_pred HHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHH
Confidence 45444 99999999999888865555 6777888889 888777666655544333332 233321 23555
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHH
Q 015348 79 TMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVG 143 (408)
Q Consensus 79 ~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~ 143 (408)
.++.+-++.=+|.=..+....-++-|..|++ +||..++.-+...++-.++-..++-
T Consensus 358 ~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~---------~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 358 LLLGGIALSRIGLWSFDLAVTQIMQENVPES---------ERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHhhcccCCHH---------HhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666667777777788888878888877765 4999999888888888777766543
No 291
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=88.86 E-value=3.8 Score=37.69 Aligned_cols=61 Identities=20% Similarity=0.101 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 015348 76 SIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFA 145 (408)
Q Consensus 76 ~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l 145 (408)
+.|..++.-+..|+..|..++.....+.|..+++ +|...++....+-++|..++..++-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~---------~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPE---------DREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHH---------HHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 8888888899999999999988888887766554 488889988888888888888776554
No 292
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=87.77 E-value=4.4 Score=36.79 Aligned_cols=48 Identities=19% Similarity=0.106 Sum_probs=23.8
Q ss_pred eeEEEEEeccCCChhhHHHHHHHHH--HHHHHHHHHHH-HhhccCCCceehH
Q 015348 224 TMFFYQTQNLKIRSSVLGISKVFGQ--AAMLLWGVIYN-SGLKSVSPRKLIS 272 (408)
Q Consensus 224 ~~~~~~~~~~g~~~~~~g~~~~~~~--~~~~~~~~~~~-~l~~~~~~~~~~~ 272 (408)
..|.. .+.-|.|-+..+....... ..-++.+++.. ...+|+||||...
T Consensus 52 ~iP~l-L~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 52 AIPLL-LQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred hhHHH-hcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhcccccee
Confidence 34433 3345666666655443322 22333333333 3455899887643
No 293
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=86.09 E-value=1.3 Score=39.08 Aligned_cols=103 Identities=10% Similarity=0.030 Sum_probs=60.8
Q ss_pred cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCc
Q 015348 32 KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMT 111 (408)
Q Consensus 32 ~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~ 111 (408)
+.+.+.+..+ +|-|..+.++......... ......+..++-.-...|++.+..+..--+++.+..++...
T Consensus 75 ~m~~~~~Ir~-----~g~K~tm~lav~~Y~lyiA-----~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~ 144 (390)
T KOG3097|consen 75 SMFMPLLIRF-----LGTKWTMVLAVFPYALYIA-----ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYAN 144 (390)
T ss_pred HHHHHHHHHH-----HhhHHHHHHHHHHHHHHHH-----hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHH
Confidence 3444456666 8999988887665543322 21223677888888888988888777666677666654331
Q ss_pred cc--hhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 015348 112 SS--KKAQSSSGELQSFVWMSSSMGGVLGNLLVGF 144 (408)
Q Consensus 112 ~~--~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~ 144 (408)
.+ +..|....+..+.+.+...-+...|..++..
T Consensus 145 ~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issl 179 (390)
T KOG3097|consen 145 QRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSL 179 (390)
T ss_pred hhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHH
Confidence 11 0011133556666666666666666554443
No 294
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=77.08 E-value=28 Score=28.93 Aligned_cols=44 Identities=9% Similarity=-0.154 Sum_probs=29.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhhccCC---CceehHHHHHHH
Q 015348 235 IRSSVLGISKVFGQAAMLLWGVIYNSGLKSVS---PRKLISAIQAMM 278 (408)
Q Consensus 235 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~ 278 (408)
-|+.+-+..+...++++....+..|..++++. ||+....+..+.
T Consensus 161 gS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s~~~r~~~~rl~~gl~ 207 (232)
T COG2836 161 GSAFEGALVMLAFGLGTLPNLLAMGIFSSKLSKSSRKRLNRLSGGLM 207 (232)
T ss_pred CCHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 36667777788888888888888777776653 444444444443
No 295
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=75.58 E-value=2.1 Score=36.35 Aligned_cols=59 Identities=8% Similarity=0.143 Sum_probs=42.3
Q ss_pred cccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHH
Q 015348 199 LRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVI 257 (408)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 257 (408)
+++-.+....+...+.-..........++|..++++++.+...++-++..+.+...+.+
T Consensus 198 F~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 198 FGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 55666666666666655566666777888899999988888888777777766655544
No 296
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=72.92 E-value=43 Score=28.82 Aligned_cols=54 Identities=15% Similarity=0.258 Sum_probs=25.0
Q ss_pred hheeecccccccCCcchhHHH----HHHHHHHHHHHHHH-HhccCcchHHHHHHHHHHHHHHH
Q 015348 34 LYGVVSDAVYISGQHRVPYIA----IGAFLQAVSWLAIA-ILSQSSISIFTMSLFLLLSNLGA 91 (408)
Q Consensus 34 ~~G~l~Dr~~~~~~grk~~l~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~~~ 91 (408)
..|.+... .++||+++. .+.+...++.+... ..+....+...+++.-++.|++.
T Consensus 160 ~ig~~nkt----~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 160 TIGLWNKT----NYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred eeccchhh----hhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 34555443 267888765 33444444444421 22211123444555555555544
No 297
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=67.42 E-value=34 Score=34.43 Aligned_cols=63 Identities=10% Similarity=0.045 Sum_probs=39.5
Q ss_pred cccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHh
Q 015348 30 VGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEV 96 (408)
Q Consensus 30 ~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 96 (408)
.+..+.+.++|.-.. ..||.+-+.++.+.++++.+...+.. ...|.+....++.+++.++...
T Consensus 38 ~LG~ia~al~D~d~~-~~~R~~~l~~t~~~f~i~sl~v~ll~---~~p~lf~~~l~~~tf~~~mlga 100 (704)
T TIGR01666 38 ILGIIAAALVDLDDR-LTGRLKNVIFTLICFSIASFSVELLF---GKPWLFAVGLTVSTFGFIMLGA 100 (704)
T ss_pred HHHHHhhccCCCCCc-HHHHHHHHHHHHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHHH
Confidence 446677888887322 23555566677777776666655443 2677777777777666655543
No 298
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=64.11 E-value=30 Score=34.80 Aligned_cols=64 Identities=11% Similarity=0.050 Sum_probs=40.3
Q ss_pred ccccchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHh
Q 015348 29 MVGKPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEV 96 (408)
Q Consensus 29 ~~~~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 96 (408)
..+..+.+.++|.-.. ..||.+-++++.++++++.+...+.. ...|.+.....+.+++.++...
T Consensus 37 l~lG~ia~~l~D~~~~-~~~R~~~l~it~~~f~i~sl~v~ll~---~~p~~~~~~l~~~tf~~~mlga 100 (701)
T TIGR01667 37 LCLGIIAAGLDDLDDR-LTGRLKNLIITLSCFSIASFLVQLLF---PKPWLFPFLLTLLTFGFILLGA 100 (701)
T ss_pred HHHhhHhhccCCCCcc-HHHHHHHHHHHHHHHHHHHHHHHHHh---cchHHHHHHHHHHHHHHHHHHH
Confidence 3346677888887322 23556667777777777777665544 2667777777777766665543
No 299
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=62.33 E-value=58 Score=30.70 Aligned_cols=35 Identities=9% Similarity=-0.072 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHH
Q 015348 242 ISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQA 276 (408)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 276 (408)
++.....+..++......++..|+..+.-+..+.+
T Consensus 49 ~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv 83 (437)
T TIGR00939 49 YYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLV 83 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccchhHHHHH
Confidence 44445555666666666677777765444444433
No 300
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=60.52 E-value=92 Score=25.42 Aligned_cols=30 Identities=20% Similarity=0.311 Sum_probs=17.0
Q ss_pred HHHHHHHHhhcCChhhHHHHHHHHHHHHHH
Q 015348 138 GNLLVGFAIDRFSPPSMFLFFGLLVVLQFF 167 (408)
Q Consensus 138 g~~l~~~l~~~~g~~~~f~i~~~~~~~~~~ 167 (408)
.+.+++.......-.|..-..+.+++...+
T Consensus 42 ~Sl~~~~~l~~ip~~wiLGlLGliPI~lGi 71 (191)
T PF03596_consen 42 ASLLGAFGLLFIPPEWILGLLGLIPIYLGI 71 (191)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 355555555555566665556666655544
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.26 E-value=62 Score=23.34 Aligned_cols=35 Identities=20% Similarity=0.010 Sum_probs=26.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015348 332 PGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGV 366 (408)
Q Consensus 332 ~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~ 366 (408)
++.++...++--+.--+++.+-....||+.|++--
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 35567777777777788888888888999988643
No 302
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=59.46 E-value=78 Score=27.75 Aligned_cols=39 Identities=18% Similarity=0.100 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHh
Q 015348 55 IGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEV 96 (408)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 96 (408)
.+.+.++++.++..+.. .+.|.+.+..++.+++.++...
T Consensus 4 ~~~~~~~~~s~~~~l~~---~~~~l~~~~~~~~~F~~~ml~~ 42 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLF---PYPWLLILVLALLTFFFGMLGV 42 (284)
T ss_pred HHHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHH
Confidence 34444434444444333 1566666666776666665543
No 303
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=57.81 E-value=3.9 Score=36.38 Aligned_cols=111 Identities=13% Similarity=0.012 Sum_probs=1.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhccC-CCceehHHHHHHHHHHHHHhHhhhccccc----ccCcCceEeehhhhHHHHHHHHH
Q 015348 243 SKVFGQAAMLLWGVIYNSGLKSV-SPRKLISAIQAMMAVFMISDVLFVKGVYR----EMGVPDSLYVLIFSSLLEVMFFF 317 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
......++-.+|..+.++..-+. ++|.+.... +.-.+. +..+.+....+. ...+.+.+ ..++..+..++..+
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s-~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~-~~~i~~~l~g~TNG 263 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILS-LLRFLF-IPLFLLCNVQPRPRYLPVLFNSDA-WFIILMLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHH-HHHHHH-HHHHHHHHhhcccccCCCcccchH-HHHHHHHHHHHccc
Confidence 45567888888888776533221 233333222 121111 111111111100 00122222 22333444455444
Q ss_pred hhhhH-HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH
Q 015348 318 KILPF-SVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYL 356 (408)
Q Consensus 318 ~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~ 356 (408)
-.... +.+..+.+++++|..+-.+......+|-.+|..+
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ---HHHH---------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444 5666777777777666555555566666666544
No 304
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=48.26 E-value=75 Score=28.87 Aligned_cols=118 Identities=16% Similarity=0.150 Sum_probs=72.2
Q ss_pred cccchheeecccccccCCcch--hHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcc
Q 015348 30 VGKPLYGVVSDAVYISGQHRV--PYIAIGAFLQAVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAK 107 (408)
Q Consensus 30 ~~~~~~G~l~Dr~~~~~~grk--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~ 107 (408)
+..+..|.+--+ +.|. -.+.++.+..+...+.+..+. ++|..++..++....+.+..+.+.+-+++..+
T Consensus 286 ~~~~~~g~l~i~-----w~r~g~~ll~~~s~~~agllf~m~~t~----~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~ 356 (433)
T KOG3810|consen 286 IAALAAGYLNIN-----WNRWGDLLLAVGSAVQAGLLFIMAQTQ----HIWVCYAGYVLFRVIYQLTITIATFQIARNLS 356 (433)
T ss_pred HHHHHHHheeec-----cchhhHHHHHHHHHHhhhhhhhhhccc----ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhh
Confidence 335566666655 3333 345556666666666677777 89999999999888888888888788887776
Q ss_pred CCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-----------hhhHHHHHHHHHHHHHHH
Q 015348 108 QPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFS-----------PPSMFLFFGLLVVLQFFI 168 (408)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-----------~~~~f~i~~~~~~~~~~~ 168 (408)
++ ..|...|+... ++-++-.++.-..++..| +..-|.+.+++.++....
T Consensus 357 ~e---------~~gLvFGiNTF---vAl~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~ 416 (433)
T KOG3810|consen 357 SE---------LFGLVFGINTF---VALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGI 416 (433)
T ss_pred hh---------hheeeeehHHH---HHHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHH
Confidence 65 37777773322 233333444333344211 223466666766666443
No 305
>PF11345 DUF3147: Protein of unknown function (DUF3147); InterPro: IPR021493 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=48.25 E-value=1.1e+02 Score=22.37 Aligned_cols=75 Identities=11% Similarity=-0.006 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-CChhhHHHHHHHHHHH
Q 015348 86 LSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR-FSPPSMFLFFGLLVVL 164 (408)
Q Consensus 86 l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~-~g~~~~f~i~~~~~~~ 164 (408)
+.|+..++..+...+++....+.++ + ...-.+.-...+..|.++..........+ .+|...+...-+.-++
T Consensus 27 ~GGifAA~PaV~lasl~~~~~~~~~--~------~a~~~s~Ga~~G~~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~W~v 98 (108)
T PF11345_consen 27 FGGIFAAFPAVFLASLLILGIQHGG--K------QAAHFSRGAVFGMIGTIICVLVVWFLLKASHGWLLSIILGLIVWFV 98 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcch--h------hHHHHHhHhHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 4455555555555455554444332 2 22223322334445555555555555554 6776666544333333
Q ss_pred HHHH
Q 015348 165 QFFI 168 (408)
Q Consensus 165 ~~~~ 168 (408)
....
T Consensus 99 ~a~~ 102 (108)
T PF11345_consen 99 VAVV 102 (108)
T ss_pred HHHH
Confidence 3333
No 306
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=46.53 E-value=73 Score=20.03 Aligned_cols=45 Identities=9% Similarity=0.098 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHhhhcccc
Q 015348 131 SSMGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQFFITIAVRES 175 (408)
Q Consensus 131 ~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~e~ 175 (408)
.-+|.++|.+.+......+++.....+..+..++...+.-.+|++
T Consensus 11 ~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 346777777666666556777777666666666555554445544
No 307
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=45.76 E-value=10 Score=27.14 Aligned_cols=53 Identities=17% Similarity=0.152 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh
Q 015348 13 VDPSTLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL 70 (408)
Q Consensus 13 ~s~~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~ 70 (408)
+.|+..|-+.+.+.-.++. +.+|++..|+ .++-++=.+|..++.++...+.+.
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg-----~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDG-----VRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcC-----cCCChHHHHhHHHHHHhHHheEec
Confidence 3446667777777755665 8999999999 888888778877777776655443
No 308
>COG1288 Predicted membrane protein [Function unknown]
Probab=43.46 E-value=1.2e+02 Score=28.35 Aligned_cols=33 Identities=9% Similarity=0.087 Sum_probs=21.7
Q ss_pred hhcCChhhHHHHHHHHHHHHHHHhhh--ccccccc
Q 015348 146 IDRFSPPSMFLFFGLLVVLQFFITIA--VRESALK 178 (408)
Q Consensus 146 ~~~~g~~~~f~i~~~~~~~~~~~~~~--~~e~~~~ 178 (408)
.+-.+||...|+......+..+.++. +|++|+.
T Consensus 213 ~sG~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~~ 247 (481)
T COG1288 213 LSGMGLRIVVWVVFTLISIIYVYWYASKVKKDPTL 247 (481)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 34478999999887776666555543 5555543
No 309
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=42.06 E-value=1.2e+02 Score=27.11 Aligned_cols=69 Identities=19% Similarity=0.083 Sum_probs=43.2
Q ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHH
Q 015348 61 AVSWLAIAILSQSSISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNL 140 (408)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 140 (408)
.+.-....+.+ ++|...+.-+.-|+-.|..++...--+.+-.+++ +|-.+++....+-++|..++..
T Consensus 330 f~~~a~~~ftp----si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd---------~rEfamsavs~sDS~Gi~lA~~ 396 (409)
T KOG3880|consen 330 FLLQAWYWFTP----SIWIVFALILFEGLLGGASYVNTFHNIHKETEPD---------VREFAMSAVSISDSIGIFLAGL 396 (409)
T ss_pred HHHHHHHHhcc----HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCch---------HHHHhHhhheecchhhHHHHHH
Confidence 33334455667 8888888888888877776664433333333332 4777888666666666665555
Q ss_pred HH
Q 015348 141 LV 142 (408)
Q Consensus 141 l~ 142 (408)
++
T Consensus 397 la 398 (409)
T KOG3880|consen 397 LA 398 (409)
T ss_pred Hh
Confidence 44
No 310
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=40.76 E-value=93 Score=23.07 Aligned_cols=13 Identities=8% Similarity=0.166 Sum_probs=7.3
Q ss_pred HHHhhhccccccc
Q 015348 166 FFITIAVRESALK 178 (408)
Q Consensus 166 ~~~~~~~~e~~~~ 178 (408)
+++++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 3445567766543
No 311
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=40.17 E-value=1.9e+02 Score=24.75 Aligned_cols=24 Identities=13% Similarity=0.332 Sum_probs=12.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Q 015348 121 GELQSFVWMSSSMGGVLGNLLVGF 144 (408)
Q Consensus 121 g~~~~~~~~~~~~g~~ig~~l~~~ 144 (408)
.+.....-.+.-+|.++|...+..
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~ 32 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRI 32 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444554444555555555544433
No 312
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=39.75 E-value=93 Score=28.83 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcc
Q 015348 244 KVFGQAAMLLWGVIYNSGLKS 264 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~l~~~ 264 (408)
.....+..++....-.++..|
T Consensus 62 ~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 62 TLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444455555
No 313
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=39.50 E-value=3.6e+02 Score=26.06 Aligned_cols=63 Identities=21% Similarity=0.277 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Q 015348 80 MSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDRFSP 151 (408)
Q Consensus 80 ~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~~g~ 151 (408)
+++..++..+......++..+.-+.++++. .-|+.|.+.+...|+|+---..+.-++++.+.+
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~---------IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~ 470 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPA---------IGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTV 470 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcc---------cchHHHHHHHHHHhcCCCchHHHHHHHhhhccc
Confidence 344456677777777777778888887765 488999998888888764444444444444333
No 314
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=39.32 E-value=86 Score=18.83 Aligned_cols=17 Identities=24% Similarity=0.391 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHhcCC
Q 015348 350 FIVSGYLGVALASYTGV 366 (408)
Q Consensus 350 ~~ig~~~~g~l~~~~g~ 366 (408)
+.+|..+++++.+.++.
T Consensus 4 GiiGa~vGg~l~~~lg~ 20 (48)
T PF04226_consen 4 GIIGAFVGGWLFGLLGI 20 (48)
T ss_pred ehHHHHHHHHHHHHhcc
Confidence 35677778888877776
No 315
>PRK02237 hypothetical protein; Provisional
Probab=38.87 E-value=19 Score=25.87 Aligned_cols=50 Identities=18% Similarity=0.054 Sum_probs=36.9
Q ss_pred HHHHHHHHhhcccccc-cchheeecccccccCCcchhHHHHHHHHHHHHHHHHHHh
Q 015348 16 STLQLLQNSANLPMVG-KPLYGVVSDAVYISGQHRVPYIAIGAFLQAVSWLAIAIL 70 (408)
Q Consensus 16 ~~~g~~~~~~~~~~~~-~~~~G~l~Dr~~~~~~grk~~l~~~~~~~~~~~~~~~~~ 70 (408)
+..|-+.+.+.-.++. +.+|++..|+ .+.-++=.+|..++.++...+.+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg-----~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDG-----VRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcC-----cCCChhHHHhHHHHHHhHHHheec
Confidence 4577777777755666 8899999999 777777777877777776655443
No 316
>COG4300 CadD Predicted permease, cadmium resistance protein [Inorganic ion transport and metabolism]
Probab=38.80 E-value=1.8e+02 Score=23.44 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHH
Q 015348 133 MGGVLGNLLVGFAIDRFSPPSMFLFFGLLVVLQ 165 (408)
Q Consensus 133 ~g~~ig~~l~~~l~~~~g~~~~f~i~~~~~~~~ 165 (408)
.+-+..+.+..+..+...-+|.....+.+++..
T Consensus 48 ~~lilaSL~~a~v~~fvp~e~I~glLGLIPi~L 80 (205)
T COG4300 48 VILILASLLFAFVLNFVPEEWILGLLGLIPIYL 80 (205)
T ss_pred HHHHHHHHHHHHHHhhCcHHHHHHHHhHHHHHH
Confidence 334445555555555555555544444444433
No 317
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=36.06 E-value=2.5e+02 Score=23.20 Aligned_cols=52 Identities=10% Similarity=0.206 Sum_probs=27.3
Q ss_pred hhhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 015348 318 KILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGD 369 (408)
Q Consensus 318 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~ 369 (408)
...|...-.++..++++|-+..--......+-..+....+..+.+.+|.+-.
T Consensus 19 g~ip~f~~lt~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~ 70 (203)
T PF01914_consen 19 GNIPIFLSLTKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLP 70 (203)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 3445544444555555544433322333333444555677788888887543
No 318
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=34.44 E-value=20 Score=31.95 Aligned_cols=26 Identities=4% Similarity=-0.054 Sum_probs=15.9
Q ss_pred HHHHHHhhccCCCceehHHHHHHHHH
Q 015348 255 GVIYNSGLKSVSPRKLISAIQAMMAV 280 (408)
Q Consensus 255 ~~~~~~l~~~~~~~~~~~~~~~~~~~ 280 (408)
..+.+.+.+++|.|..+..+......
T Consensus 75 ~m~~~~~Ir~~g~K~tm~lav~~Y~l 100 (390)
T KOG3097|consen 75 SMFMPLLIRFLGTKWTMVLAVFPYAL 100 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 33344667778888777665544443
No 319
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=33.62 E-value=2.9e+02 Score=26.89 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 015348 240 LGISKVFGQAAMLLWGVIYNSGLKSVSPR 268 (408)
Q Consensus 240 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~~ 268 (408)
.........+++.+++..++++-+.++.+
T Consensus 299 ~t~~i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 299 LTAAIILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 44455666777888888888887776643
No 320
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=32.67 E-value=3.2e+02 Score=26.96 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=53.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015348 74 SISIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVGFAIDR 148 (408)
Q Consensus 74 ~~~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~~l~~~ 148 (408)
..|.++.+--.++.|++..+..+...-+.-+-+|++ .|+..++++.....+|..+...+.......
T Consensus 455 ~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~s---------MkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 455 PMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPES---------MKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred CeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 357889999999999999999988777777777764 599999988888888888888887655443
No 321
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=32.10 E-value=2.9e+02 Score=22.76 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHH
Q 015348 125 SFVWMSSSMGGVLGNLLVGFAIDRFSPPSMFLFFGLL 161 (408)
Q Consensus 125 ~~~~~~~~~g~~ig~~l~~~l~~~~g~~~~f~i~~~~ 161 (408)
.......-++..+|..+++.+.+..+.+ ..++.+.+
T Consensus 165 ~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 165 ALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 3344466667777788888888777754 33443333
No 322
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=31.19 E-value=20 Score=31.96 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=3.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHH
Q 015348 76 SIFTMSLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLV 142 (408)
Q Consensus 76 ~~~~~~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~ 142 (408)
+-+..++..++.|+.+|........+.++..++++ |..+..+.......|-.+|..++
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e---------~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE---------RELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --------------------HHHH-------------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788899999999998888788888777543 44445555556667777776654
No 323
>COG2095 MarC Multiple antibiotic transporter [Intracellular trafficking and secretion]
Probab=27.19 E-value=3.6e+02 Score=22.32 Aligned_cols=51 Identities=18% Similarity=0.226 Sum_probs=30.1
Q ss_pred hhhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 015348 319 ILPFSVYIAQVCPPGCEGSIMAFVMSAVALAFIVSGYLGVALASYTGVTGD 369 (408)
Q Consensus 319 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ig~~~~g~l~~~~g~~~~ 369 (408)
..|...-+.+..++++|-+..=-.+........+.-..+..+.+.+|.+-.
T Consensus 23 ~ipvf~slt~~~~~~~r~~v~~ra~i~a~~ill~f~~~G~~il~~fgIsi~ 73 (203)
T COG2095 23 NLPVFISLTKGLSPEERNRVALRASIIALLILLVFLLLGEGILRFFGISID 73 (203)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 345545556667777776654333333334444555667788888887644
No 324
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.90 E-value=2.4e+02 Score=20.21 Aligned_cols=29 Identities=7% Similarity=-0.218 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHhhccCCCceehHHHHHHH
Q 015348 250 AMLLWGVIYNSGLKSVSPRKLISAIQAMM 278 (408)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 278 (408)
..++|.++.-++-++++....+.+.+++.
T Consensus 55 pil~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 55 PTLLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 34444444444445566655444443333
No 325
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=25.54 E-value=1.4e+02 Score=23.27 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=23.1
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 015348 323 SVYIAQVCPPGCEGSIMAFVMSAVALAFIV 352 (408)
Q Consensus 323 ~~~~~~~~p~~~~g~~~g~~~~~~~lg~~i 352 (408)
+..++..-++++.|...|.-..-.|++.+.
T Consensus 116 YGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 116 YGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 456666677888999999988888877654
No 326
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=24.22 E-value=5e+02 Score=22.89 Aligned_cols=79 Identities=16% Similarity=0.087 Sum_probs=34.6
Q ss_pred HHHhcccchhHHHHHHHHhhhcccccccceeEEEEEeccCCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHH
Q 015348 195 LSAALRKPEIMYSVAWFAASYSIIPVLTGTMFFYQTQNLKIRSSVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAI 274 (408)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 274 (408)
.++..|+|+.+............+..... |..+.- ..-+.++-.-++.+.+++-+.+ .+.||.++-+.+.++
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfi----WAvn~g--~~leaSLGY~InPL~~VllG~l--flkErls~~Q~iAV~ 133 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFI----WAVNNG--HVLEASLGYFINPLVNVLLGRL--FLKERLSRLQWIAVG 133 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhh----eecCCC--chhHHHhHHHHHHHHHHHHHHH--HHHhhccHHHHHHHH
Confidence 33457777665554444332222222222 222222 2333444344444444433322 345777766655555
Q ss_pred HHHHHHH
Q 015348 275 QAMMAVF 281 (408)
Q Consensus 275 ~~~~~~~ 281 (408)
....++.
T Consensus 134 lA~~GV~ 140 (293)
T COG2962 134 LAAAGVL 140 (293)
T ss_pred HHHHHHH
Confidence 4444443
No 327
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=22.34 E-value=45 Score=25.21 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=8.0
Q ss_pred hhHHHHHHHHHHHHHHH
Q 015348 152 PSMFLFFGLLVVLQFFI 168 (408)
Q Consensus 152 ~~~f~i~~~~~~~~~~~ 168 (408)
||++++..++.++.+++
T Consensus 1 RW~l~~iii~~i~l~~~ 17 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLF 17 (130)
T ss_pred CeeeHHHHHHHHHHHHH
Confidence 45555554444444333
No 328
>PRK15015 carbon starvation protein A; Provisional
Probab=21.91 E-value=8.3e+02 Score=24.61 Aligned_cols=39 Identities=8% Similarity=0.030 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhccCc-chHHHHHHHHHHHHHHHHHHHh
Q 015348 58 FLQAVSWLAIAILSQSS-ISIFTMSLFLLLSNLGASIAEV 96 (408)
Q Consensus 58 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~ 96 (408)
++.+.+....++...++ +..|..++...+..+++-+..-
T Consensus 15 ~~ga~~~~~~al~rge~mnal~lv~aa~~~y~iaYrfYgr 54 (701)
T PRK15015 15 VMGAFALGYIALNRGEQINALWIVVASVCIYLIAYRFYGL 54 (701)
T ss_pred HHHHHHheeeeecCCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555443 3455556666666666655543
No 329
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=21.57 E-value=4.4e+02 Score=22.38 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhccCCCccchhhccCcchhHHHHHHHHHHHHHHHHHHHH
Q 015348 81 SLFLLLSNLGASIAEVANDALVAEMAKQPMTSSKKAQSSSGELQSFVWMSSSMGGVLGNLLVG 143 (408)
Q Consensus 81 ~~~~~l~g~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~l~~ 143 (408)
....+-.|+|.+....++.+-+.+..|+. .....++...+.-+..+.|-...-
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P~~----------a~~i~A~AaaSNllt~~~G~Y~~i 227 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYPEM----------ADQILAFAAASNLLTSVTGLYMSI 227 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCcch----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677789999998888888888888763 333455444455555555544433
No 330
>PRK11111 hypothetical protein; Provisional
Probab=20.38 E-value=5.1e+02 Score=21.63 Aligned_cols=50 Identities=16% Similarity=0.274 Sum_probs=24.8
Q ss_pred hhhHHHHHHHhcCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCC
Q 015348 319 ILPFSVYIAQVCPPGCEGSIMAFVMSAVA-LAFIVSGYLGVALASYTGVTGD 369 (408)
Q Consensus 319 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-lg~~ig~~~~g~l~~~~g~~~~ 369 (408)
..|...-.++..++++|-+. +....... .--.+....+.++.+.+|.+-.
T Consensus 26 ~ipiflslt~~~s~~~r~~i-a~~a~l~a~~ill~f~~~G~~iL~~fGIsl~ 76 (214)
T PRK11111 26 ILPVFISMTSHQTAAERNKT-NLTANLSVAIILLISLFLGDFILNLFGISID 76 (214)
T ss_pred hHHHHHHHhCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 34663333444444444332 22222222 2333455677788889987643
No 331
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=20.02 E-value=3.2e+02 Score=19.86 Aligned_cols=44 Identities=11% Similarity=0.045 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCceehHHHHHHHHHH
Q 015348 238 SVLGISKVFGQAAMLLWGVIYNSGLKSVSPRKLISAIQAMMAVF 281 (408)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 281 (408)
...|-..+.++-.-++.++++++..|+..+.+.=.++..++.+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G 97 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVG 97 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHh
Confidence 55788888888888999999999999987766555555444443
Done!