Your job contains 1 sequence.
>015349
MGDAESALPPSKKRAAGRELSRDNPGLDDEEDSSELESGTFKKATDEVLATRRIVKVRRN
QTASTPSSNPFAGIRLVPSTEPSATVTPATTEPTKTVSPAATELLESSENKVSVDANNDA
GKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPASADAAGKKSS
DDKENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDSSQLSSFGQLSSTQNAFTGLAGT
GFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEKVVFSADSVLFEFLDGSWKE
RGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATE
GKSGLSTFALKFRDASIVEEFQTAVAAHKDKTTAVLKTPENSPKATDD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015349
(408 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018204 - symbol:AT1G52380 species:3702 "Arabi... 576 6.8e-56 1
TAIR|locus:2093372 - symbol:AT3G15970 species:3702 "Arabi... 520 5.8e-50 1
DICTYBASE|DDB_G0278271 - symbol:DDB_G0278271 "Ran-binding... 182 1.5e-11 1
POMBASE|SPBC365.13c - symbol:hba1 "Ran GTPase binding pro... 177 6.9e-11 1
FB|FBgn0039302 - symbol:Nup358 "Nucleoporin 358kD" specie... 184 2.1e-10 2
ZFIN|ZDB-GENE-040426-1132 - symbol:ranbp3 "RAN binding pr... 158 3.5e-10 2
POMBASE|SPBC1773.07c - symbol:sbp1 "Ran GTPase binding pr... 150 4.1e-10 2
ZFIN|ZDB-GENE-040426-1627 - symbol:zgc:66385 "zgc:66385" ... 172 4.5e-10 1
SGD|S000002409 - symbol:YRB1 "Ran GTPase binding protein"... 141 8.3e-10 2
UNIPROTKB|G4N530 - symbol:MGG_05203 "Ran-specific GTPase-... 148 2.1e-09 2
ASPGD|ASPL0000058693 - symbol:AN0084 species:162425 "Emer... 136 3.1e-09 2
UNIPROTKB|F1PS48 - symbol:RANBP3 "Uncharacterized protein... 150 7.8e-09 2
UNIPROTKB|Q9H6Z4 - symbol:RANBP3 "Ran-binding protein 3" ... 150 1.7e-08 2
FB|FBgn0039110 - symbol:RanBP3 "Ran binding protein 3" sp... 155 2.8e-08 1
UNIPROTKB|B7Z7F3 - symbol:RANBP3 "Ran-binding protein 3" ... 150 2.8e-08 2
UNIPROTKB|F1SBU0 - symbol:RANBP3 "Uncharacterized protein... 150 3.6e-08 1
CGD|CAL0005670 - symbol:YRB1 species:5476 "Candida albica... 129 4.1e-08 2
UNIPROTKB|Q5AAL2 - symbol:YRB1 "Putative uncharacterized ... 129 4.1e-08 2
SGD|S000001325 - symbol:YRB2 "Protein of unknown function... 128 4.8e-08 2
ASPGD|ASPL0000004916 - symbol:AN10754 species:162425 "Eme... 143 5.4e-08 2
UNIPROTKB|F5H4C2 - symbol:RANBP3 "Ran-binding protein 3" ... 150 9.8e-08 1
POMBASE|SPCC18B5.07c - symbol:nup61 "nucleoporin Nup61" s... 138 1.1e-07 2
UNIPROTKB|F1PS47 - symbol:RANBP3 "Uncharacterized protein... 150 1.2e-07 1
UNIPROTKB|Q24K04 - symbol:RANBP3 "Uncharacterized protein... 150 1.3e-07 1
GENEDB_PFALCIPARUM|PFD0950w - symbol:PFD0950w "ran bindin... 143 2.1e-07 1
UNIPROTKB|Q76NN6 - symbol:PFD0950w "Ran binding protein 1... 143 2.1e-07 1
UNIPROTKB|F1NJ42 - symbol:RANBP3 "Uncharacterized protein... 148 2.2e-07 1
UNIPROTKB|P48820 - symbol:RANBP2 "E3 SUMO-protein ligase ... 152 2.2e-07 1
MGI|MGI:1919060 - symbol:Ranbp3 "RAN binding protein 3" s... 147 3.2e-07 2
UNIPROTKB|K7EIJ4 - symbol:RANBP3 "Ran-binding protein 3" ... 122 4.9e-07 1
UNIPROTKB|Q7Z3J3 - symbol:RGPD4 "RanBP2-like and GRIP dom... 155 5.2e-07 2
UNIPROTKB|J3KNY6 - symbol:RGPD4 "RanBP2-like and GRIP dom... 155 5.2e-07 2
UNIPROTKB|F1NGF7 - symbol:RANBP3L "Uncharacterized protei... 143 6.2e-07 1
UNIPROTKB|E7ES93 - symbol:RGPD1 "RANBP2-like and GRIP dom... 149 8.8e-07 2
UNIPROTKB|Q86VV4 - symbol:RANBP3L "Ran-binding protein 3-... 141 1.1e-06 1
UNIPROTKB|F1MXS1 - symbol:RANBP2 "Putative peptidyl-proly... 152 1.8e-06 2
DICTYBASE|DDB_G0287391 - symbol:ranbp1 "Ran binding prote... 121 2.0e-06 2
UNIPROTKB|P0DJD0 - symbol:RGPD1 "RANBP2-like and GRIP dom... 149 2.4e-06 2
UNIPROTKB|F8VYC4 - symbol:RGPD1 "RANBP2-like and GRIP dom... 149 2.4e-06 2
UNIPROTKB|F1MZD9 - symbol:NUP50 "Uncharacterized protein"... 107 2.6e-06 3
UNIPROTKB|J9P0I5 - symbol:RANBP3L "Uncharacterized protei... 134 2.8e-06 2
UNIPROTKB|J3QTV4 - symbol:RGPD2 "RANBP2-like and GRIP dom... 148 3.1e-06 2
UNIPROTKB|P0DJD1 - symbol:RGPD2 "RANBP2-like and GRIP dom... 148 3.1e-06 2
UNIPROTKB|A6NKT7 - symbol:RGPD3 "RanBP2-like and GRIP dom... 147 3.2e-06 2
UNIPROTKB|J3KNE0 - symbol:RGPD3 "RanBP2-like and GRIP dom... 147 3.2e-06 2
UNIPROTKB|J3KQ37 - symbol:RGPD8 "RANBP2-like and GRIP dom... 147 3.4e-06 2
MGI|MGI:2444654 - symbol:Ranbp3l "RAN binding protein 3-l... 137 3.4e-06 1
UNIPROTKB|Q99666 - symbol:RGPD5 "RANBP2-like and GRIP dom... 147 4.0e-06 2
UNIPROTKB|O14715 - symbol:RGPD8 "RANBP2-like and GRIP dom... 147 4.0e-06 2
UNIPROTKB|E9PGT0 - symbol:RANBP2 "Putative peptidyl-proly... 147 4.2e-06 2
UNIPROTKB|F1PS89 - symbol:RANBP3L "Uncharacterized protei... 134 6.0e-06 1
UNIPROTKB|F1PS90 - symbol:RANBP3L "Uncharacterized protei... 134 7.3e-06 1
UNIPROTKB|F1SNB4 - symbol:RANBP3L "Uncharacterized protei... 133 7.7e-06 1
UNIPROTKB|F1SNB5 - symbol:RANBP3L "Uncharacterized protei... 133 8.4e-06 1
UNIPROTKB|F1SNB3 - symbol:RANBP3L "Uncharacterized protei... 133 8.4e-06 1
UNIPROTKB|E1BCV6 - symbol:RANBP3L "Uncharacterized protei... 133 8.6e-06 1
UNIPROTKB|P49792 - symbol:RANBP2 "E3 SUMO-protein ligase ... 147 9.0e-06 2
UNIPROTKB|G3MX58 - symbol:RANBP3L "Uncharacterized protei... 133 9.2e-06 1
ASPGD|ASPL0000030982 - symbol:nup2 species:162425 "Emeric... 119 1.1e-05 3
TAIR|locus:2178798 - symbol:RANBP1 "RAN binding protein 1... 124 1.5e-05 1
RGD|1560047 - symbol:Ranbp2 "RAN binding protein 2" speci... 143 1.6e-05 2
WB|WBGene00003795 - symbol:npp-9 species:6239 "Caenorhabd... 134 1.8e-05 2
UNIPROTKB|Q86G90 - symbol:npp-9 "Protein NPP-9, isoform b... 134 1.8e-05 2
UNIPROTKB|F1PA81 - symbol:F1PA81 "Uncharacterized protein... 151 1.9e-05 2
MGI|MGI:894323 - symbol:Ranbp2 "RAN binding protein 2" sp... 147 2.5e-05 1
DICTYBASE|DDB_G0291444 - symbol:DDB_G0291444 species:4468... 127 3.8e-05 1
UNIPROTKB|F1SU29 - symbol:RANBP2 "Uncharacterized protein... 143 3.8e-05 2
GENEDB_PFALCIPARUM|PFD0207c - symbol:PFD0207c "hypothetic... 129 3.9e-05 1
UNIPROTKB|Q8I1Y6 - symbol:PFD0207c "Putative uncharacteri... 129 3.9e-05 1
UNIPROTKB|Q5F473 - symbol:NUP50 "Uncharacterized protein"... 89 5.5e-05 3
TAIR|locus:2060837 - symbol:AT2G30060 "AT2G30060" species... 119 5.7e-05 1
TAIR|locus:2007467 - symbol:SIRANBP "AT1G07140" species:3... 118 9.0e-05 1
RGD|1307559 - symbol:Ranbp3l "RAN binding protein 3-like"... 127 9.9e-05 2
UNIPROTKB|G4N558 - symbol:MGG_13222 "Uncharacterized prot... 97 0.00013 2
UNIPROTKB|Q9UKX7 - symbol:NUP50 "Nuclear pore complex pro... 105 0.00013 2
ZFIN|ZDB-GENE-081104-93 - symbol:si:ch1073-55a19.2 "si:ch... 126 0.00013 2
RGD|3191 - symbol:Npap60 "nuclear pore associated protein... 105 0.00017 3
UNIPROTKB|G3V7R1 - symbol:Npap60 "Protein Npap60" species... 105 0.00017 3
UNIPROTKB|E2QT37 - symbol:NUP50 "Uncharacterized protein"... 101 0.00022 2
UNIPROTKB|F1NA05 - symbol:LOC770700 "Uncharacterized prot... 120 0.00022 1
DICTYBASE|DDB_G0293562 - symbol:DDB_G0293562 species:4468... 119 0.00038 1
CGD|CAL0004089 - symbol:orf19.6665 species:5476 "Candida ... 110 0.00044 3
ZFIN|ZDB-GENE-030131-1689 - symbol:nup50 "nucleoporin 50"... 98 0.00046 2
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 125 0.00062 2
WB|WBGene00004306 - symbol:ran-5 species:6239 "Caenorhabd... 114 0.00067 1
UNIPROTKB|Q5JSK9 - symbol:HMGN5 "High mobility group nucl... 109 0.00067 1
ZFIN|ZDB-GENE-091204-441 - symbol:si:zfos-979f1.2 "si:zfo... 116 0.00084 2
SGD|S000001800 - symbol:SRP40 "Nucleolar serine-rich prot... 114 0.00091 1
>TAIR|locus:2018204 [details] [associations]
symbol:AT1G52380 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638
Pfam:PF08911 PROSITE:PS50196 SMART:SM00160 EMBL:CP002684
GO:GO:0005829 GO:GO:0005634 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005643 EMBL:AC037424 GO:GO:0046907 KO:K15304 EMBL:AY037180
EMBL:AY059149 IPI:IPI00547666 PIR:A96564 RefSeq:NP_564606.1
UniGene:At.20601 ProteinModelPortal:Q9C829 SMR:Q9C829 IntAct:Q9C829
STRING:Q9C829 PRIDE:Q9C829 EnsemblPlants:AT1G52380.1 GeneID:841668
KEGG:ath:AT1G52380 TAIR:At1g52380 HOGENOM:HOG000241369
InParanoid:Q9C829 OMA:YPDMKLT PhylomeDB:Q9C829
ProtClustDB:CLSN2688429 Genevestigator:Q9C829 Uniprot:Q9C829
Length = 440
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 151/337 (44%), Positives = 194/337 (57%)
Query: 101 ATELLESSE-NKVSVDANNDAGKEAEKG-DGEDNKQSESKIDEPVAVEAA---SSEPEKG 155
A+++ E E + VD + G+E EK D +DN +S + A E A S +
Sbjct: 113 ASDIEEGDEVDSKKVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVSCDTNVC 172
Query: 156 ED--ESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEV--DNGKTAGVDKPENEDEKET 211
+ E + QT+ E NG E+++ DNG + + + T
Sbjct: 173 NNAVEGTDQTDFPLEKDSGGDQAEKKEKEG-NGIEEADKNGDNGAFSSFQQHSSNKNAFT 231
Query: 212 SHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSAS--NSTSASVF-- 267
+T+ +Q+ G GTG S F FG +P S+S +T +S+
Sbjct: 232 GLASTEASGSSFSFGLV-SQD---GSTGTG---SLFGFG-LPSSNSSSIFGATGSSIIKK 283
Query: 268 ----G----QEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRAR 319
G QEV ETGEENEKV FSADS++FE+LDG WKERGKGELKVNVS+N G+AR
Sbjct: 284 SEGSGFPPKQEVSTETGEENEKVAFSADSIMFEYLDGGWKERGKGELKVNVSSN-DGKAR 342
Query: 320 LLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVE 379
L+MRA+GNYRLILNASLYP+MKL NMDKKGITFAC+NS +EGK GLSTFALKF+D +IVE
Sbjct: 343 LVMRAKGNYRLILNASLYPEMKLANMDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVE 402
Query: 380 EFQTAVAAHKD---------KTTAVLKTPENSPKATD 407
EF+ A+ HKD K+ LKTPENSP ATD
Sbjct: 403 EFRVAIDKHKDSKPMEKAAEKSALPLKTPENSPTATD 439
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 89/278 (32%), Positives = 134/278 (48%)
Query: 1 MGDAESALPPSKKRAAGRELSRDNPGXXXXXXXXXXXXGTFKKATDEVLATRRIVKVRRN 60
MGD+E+ PSKKR A ++LSRDNPG GTFKKA+DEVLA+RRIV+V+R
Sbjct: 1 MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60
Query: 61 QTASTP--SSNPFAGIRLXXXXXXXXXXXXXXXXXXKTVSPAATELLESSENKVSVDANN 118
+ ++ P +SNPFAGI+L T +P A L +E +V +N
Sbjct: 61 EPSAAPVAASNPFAGIQLVPTTAPASTPVG-------TNAPLAESKLAPAE---AVVEDN 110
Query: 119 DAGKEAEKGDGEDNKQSESKIDEPVAV-EAASSEPEKGEDESSKQTE---SKNEPXXXXX 174
+ E+GD D+K K+D AV E +K ++ K + + E
Sbjct: 111 QKASDIEEGDEVDSK----KVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVS 166
Query: 175 XXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEK----ETSHETTDXXXXXXXXXXXXT 230
G ++++ K +G D+ E ++++ E + + D
Sbjct: 167 CDTNVCNNAVEGTDQTDFPLEKDSGGDQAEKKEKEGNGIEEADKNGDNGAFSSFQQHSSN 226
Query: 231 QNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFG 268
+NAFTGLA T S S+F+FG + +DGS + S+FG
Sbjct: 227 KNAFTGLASTEASGSSFSFGLVSQDGSTG---TGSLFG 261
>TAIR|locus:2093372 [details] [associations]
symbol:AT3G15970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638
Pfam:PF08911 PROSITE:PS50196 SMART:SM00160 GO:GO:0005829
EMBL:CP002686 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643
EMBL:AB012247 GO:GO:0046907 KO:K15304 ProtClustDB:CLSN2688429
IPI:IPI00538170 RefSeq:NP_566532.1 UniGene:At.38962
ProteinModelPortal:Q9LW88 SMR:Q9LW88 STRING:Q9LW88 PRIDE:Q9LW88
EnsemblPlants:AT3G15970.1 GeneID:820841 KEGG:ath:AT3G15970
TAIR:At3g15970 InParanoid:Q9LW88 OMA:MFEYLEG PhylomeDB:Q9LW88
Genevestigator:Q9LW88 Uniprot:Q9LW88
Length = 465
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 133/335 (39%), Positives = 182/335 (54%)
Query: 97 VSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVE-AASSEPEKG 155
+S ++++ E ++S +A N +G G NK +E +I + E AA E K
Sbjct: 141 ISAKTKDIIDGGEKEMS-EAVNSV-----EGGGAVNK-NEDEIKTTMVTEVAAGEETVKD 193
Query: 156 EDESSKQTESKNEPXXXXXXXXXXXXXXE-NGAEKSEV--DNGKTAGVDKPENEDEKETS 212
++ +S E + E +G E +E D+G + + + T
Sbjct: 194 DNNNSNTVEGSDCVVKDTGGNQTEKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTG 253
Query: 213 HETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGS----ASNSTS----- 263
+T + G G+G S+F+FG S AS +TS
Sbjct: 254 LASTGFSASSFSFGLVPQE----GSTGSGSEQSSFSFGQANNGNSSLFGASVATSITTKS 309
Query: 264 ---ASVFG--QEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRA 318
+ F Q+V VETGEENEK F+ADSV+FE+L+G WKERGKGELKVN+ST +A
Sbjct: 310 TETTTAFPSKQDVSVETGEENEKAAFTADSVMFEYLEGGWKERGKGELKVNISTTENRKA 369
Query: 319 RLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIV 378
RL+MR++GNYRL LNASLYP+MKL MDKKGITFAC+NS ++ K GLST ALKF+D ++V
Sbjct: 370 RLVMRSKGNYRLTLNASLYPEMKLAKMDKKGITFACVNSVSDAKDGLSTLALKFKDPTVV 429
Query: 379 EEFQTAVAAHKDKTTAV------LKTPENSPKATD 407
EEF+ + HKD +V LKTPENSP A D
Sbjct: 430 EEFRAVIEEHKDSKPSVAEAAAPLKTPENSPSAED 464
Score = 220 (82.5 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 86/300 (28%), Positives = 128/300 (42%)
Query: 1 MGDAESALPPSKKRAAGRELSRDNPGXXXXXXXXXXX-XGTFKKATDEVLATRRIVKVRR 59
MGD+++A+P S+KR A +ELSRDNPG GTF A+ EVLA+RRI++VRR
Sbjct: 1 MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60
Query: 60 NQTAST--PSSNPFAGIRLXXXXXXXXXXXXXXXXXXKTVSPAATELLESSENKVSVDAN 117
++T P+SNPF GIRL K +S E L + + + +
Sbjct: 61 TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETT--KPLSAGKQETLADGRSDATKETD 118
Query: 118 NDAGKEAEKGDGED--NKQSESKIDEPVAVEAASSEP-EKGEDESSKQTES--------K 166
D+ EK D D KQ E++ DE + A + + + GE E S+ S K
Sbjct: 119 GDS---KEKSDAIDAVGKQ-ETQGDE---ISAKTKDIIDGGEKEMSEAVNSVEGGGAVNK 171
Query: 167 NEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXX 226
NE G E + DN + V+ + K+T T+
Sbjct: 172 NEDEIKTTMVTEVAA----GEETVKDDNNNSNTVEGSDCV-VKDTGGNQTEKEGKEGDGN 226
Query: 227 XXXTQNAFTGLAGT--GFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEKVVF 284
+N +G + S+S AF + G +++S S + QE +G E F
Sbjct: 227 EDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTGSGSEQSSFSF 286
>DICTYBASE|DDB_G0278271 [details] [associations]
symbol:DDB_G0278271 "Ran-binding protein 3"
species:44689 "Dictyostelium discoideum" [GO:0046907 "intracellular
transport" evidence=IEA] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 dictyBase:DDB_G0278271
Gene3D:2.30.29.30 InterPro:IPR011993 EMBL:AAFI02000023
GO:GO:0005622 GO:GO:0046907 KO:K15304 eggNOG:COG5171 OMA:GEESEEC
RefSeq:XP_642253.1 ProteinModelPortal:Q54YE9
EnsemblProtists:DDB0205337 GeneID:8621462 KEGG:ddi:DDB_G0278271
InParanoid:Q54YE9 ProtClustDB:CLSZ2846840 Uniprot:Q54YE9
Length = 372
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 70/288 (24%), Positives = 119/288 (41%)
Query: 102 TELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSK 161
TE E+ ENK E +K E+ K+ E+K + + ++G +E K
Sbjct: 90 TENKETEENKEPTTTTTTT--EEKK---EEKKEEENKETTTTTTDEKKDDKKEGVEEEKK 144
Query: 162 QTESKNEPXXXXXXXXXXXXXXENG---AEKSEVDN-GKTAGVDKPENEDEKETSHETTD 217
+ E K G A + N T+ N+ ++S TT
Sbjct: 145 EEEKKPTSIFGSGSSIFGSGFPSTGFGSASNTFSFNLNSTSSFSFGFNKSSTDSSSNTTG 204
Query: 218 XXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGE 277
N T + S S+ + D S + + + QEV ++TGE
Sbjct: 205 TSLFGNNNNNNNNNNNNTKNDDSEKSESSVSNNGC--DESDNTTFEPIIQAQEVELKTGE 262
Query: 278 ENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLY 337
E+E + S L+ D +KERG G ++VN ++R++M A G+ + ILN +++
Sbjct: 263 EDETTLCSTKGKLYILQDKQYKERGVGTIRVNKDLEE--KSRIIMNADGSKKNILNVNIF 320
Query: 338 PDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 385
P MK+T+ ++K +TF + K + TF L + I + F T +
Sbjct: 321 PKMKVTSPNEKTLTFIAFE---DDK--ICTFVLIAKPEEI-KNFSTVI 362
>POMBASE|SPBC365.13c [details] [associations]
symbol:hba1 "Ran GTPase binding protein Hba1"
species:4896 "Schizosaccharomyces pombe" [GO:0000056 "ribosomal
small subunit export from nucleus" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0034599
"cellular response to oxidative stress" evidence=IGI] [GO:0046827
"positive regulation of protein export from nucleus" evidence=IMP]
[GO:0071238 "cellular response to brefeldin A" evidence=IMP]
[GO:0071313 "cellular response to caffeine" evidence=IMP]
[GO:1901181 "negative regulation of cellular response to caffeine"
evidence=IMP] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 PomBase:SPBC365.13c GO:GO:0046827 GO:GO:0005654
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0034599 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0071313 GO:GO:0000056 EMBL:U38783
EMBL:AB027850 PIR:T40320 RefSeq:NP_596042.1
ProteinModelPortal:Q09146 EnsemblFungi:SPBC365.13c.1 GeneID:2540948
KEGG:spo:SPBC365.13c eggNOG:KOG0864 KO:K15304 OMA:ESAREYE
OrthoDB:EOG40VZZ8 NextBio:20802063 GO:GO:0071238 GO:GO:1901181
Uniprot:Q09146
Length = 399
Score = 177 (67.4 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 77/293 (26%), Positives = 124/293 (42%)
Query: 105 LESSENKVSVDANN--DAGKEAEKGDGEDNKQSESKIDEPVA-VEAASSEPEKGEDESSK 161
++ +E V+V+ A K A S S P + V ASSEP++ +
Sbjct: 113 VDENEGHVAVETGKKESAAKPAASVSPFSQFASFSNASSPFSNVSTASSEPKEEKSAFGA 172
Query: 162 QTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXX 221
SK+ A ++E +GK E E++K++S E D
Sbjct: 173 FASSKSAFTMKSVKDSPFKKFAAGTAVETESGSGK-------EKENDKKSS-ENFDELLA 224
Query: 222 XXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEK 281
AF G+ T + + G ++ ST + E++ TGEE E+
Sbjct: 225 NTSA------KAFENQKGSAGETKSEPKEADKGSGDSTKSTMHQLSDSEII--TGEEEEE 276
Query: 282 VVFSADSVLFEFLDG--SWKERGKGELKVNV-STNATGRARLLMRARGNYRLILNASLYP 338
+FS + L+ D +WKERG+G LKVNV +G RLLMR +R+I+N L+
Sbjct: 277 SIFSVRARLYVVADEKKTWKERGQGILKVNVPKQRGSGSGRLLMRNDAVHRVIMNVPLFQ 336
Query: 339 DM-----KLTNMDKKG-ITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 385
M ++ + G + I GKS L +A++ +D S+ E+ + V
Sbjct: 337 GMSKKSLQIASASSGGSANYLKIFVIENGKSVL--YAVRVKDNSLAEQLRNHV 387
>FB|FBgn0039302 [details] [associations]
symbol:Nup358 "Nucleoporin 358kD" species:7227 "Drosophila
melanogaster" [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0006607 "NLS-bearing substrate import into nucleus"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=IMP] InterPro:IPR000156 InterPro:IPR001876
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF00638 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50196 PROSITE:PS50199 PROSITE:PS50293
SMART:SM00160 SMART:SM00547 EMBL:AE014297 GO:GO:0005875
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005811 GO:GO:0008270
Gene3D:1.25.40.10 GO:GO:0007184 GO:GO:0006607 HSSP:P49792
GeneTree:ENSGT00690000102083 KO:K12172 ChiTaRS:RANBP2
FlyBase:FBgn0039302 RefSeq:NP_651361.2 ProteinModelPortal:Q9VBU7
SMR:Q9VBU7 IntAct:Q9VBU7 MINT:MINT-800479 STRING:Q9VBU7
EnsemblMetazoa:FBtr0084813 GeneID:43041 KEGG:dme:Dmel_CG11856
UCSC:CG11856-RA CTD:43041 InParanoid:Q9VBU7 PhylomeDB:Q9VBU7
GenomeRNAi:43041 NextBio:831931 ArrayExpress:Q9VBU7 Bgee:Q9VBU7
Uniprot:Q9VBU7
Length = 2695
Score = 184 (69.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 49/147 (33%), Positives = 78/147 (53%)
Query: 270 EVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNYR 329
EV V TGEE E + F++ + LF ++D WKERG G +K+ + ATG +R+LMR ++
Sbjct: 1319 EVEVRTGEEGEDIKFTSRAKLFRYVDKEWKERGTGVIKI-LCDKATGVSRVLMRRDQTHK 1377
Query: 330 LILNASLYPDMKLT----NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 385
+ N ++ D+ + + DKK + +A + A E + L F ++F+ + EEF+ A
Sbjct: 1378 VCANHTITADITINVANQDKDKKSLLWAANDFADEQVT-LERFLVRFKTGELAEEFRVAF 1436
Query: 386 A----AHKDKTTA--VLKTPENSPKAT 406
A K K T + T E AT
Sbjct: 1437 TKASEAAKSKETVKPTVNTAEKGSTAT 1463
Score = 156 (60.0 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 37/134 (27%), Positives = 73/134 (54%)
Query: 270 EVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNYR 329
++ V+TGEE+E++++ + L+ + WKERG G++K+ + T + R++MR ++
Sbjct: 2029 KIDVKTGEEDEELLYVHKAKLYRLNESDWKERGLGDVKI-LRHRQTKKLRVVMRREQVFK 2087
Query: 330 LILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAVAAHK 389
+ LN L ++ + FA ++ +EG+S L F L+F++ + + F A+ K
Sbjct: 2088 ICLNHVLNENVVYREKTETSWMFA-VHDFSEGESVLERFTLRFKNKEVAQGFMEAI---K 2143
Query: 390 DKTTAVLKTPENSP 403
+ K E+SP
Sbjct: 2144 NALNETAKPIEDSP 2157
Score = 142 (55.0 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 55/182 (30%), Positives = 78/182 (42%)
Query: 231 QNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASV-FGQEVVVETGEENEKVVFSADSV 289
QNAF + G D + A V E+VV TGEENE +F +
Sbjct: 2503 QNAFKNFESPQATEECDDDGDATTDDNYDPHYDAIVELPDEIVVTTGEENETKLFGERAK 2562
Query: 290 LFEFLDGS--WKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLT--NM 345
L+ + S WKERG GE+KV + RL+MR ++L+LN ++ +++ N
Sbjct: 2563 LYRYDAESKQWKERGVGEIKV-LEHPELQTFRLIMRQEQIHKLVLNMNISASLQMDYMNA 2621
Query: 346 DKKGITFACINSAT--EGK---SG-LSTFALKFRDASIVEEFQTAVAAHKDKTTAVLKTP 399
K +A N A EGK G L A +F I EF V + + A+
Sbjct: 2622 QMKSFLWAGYNYAVDAEGKVDTEGVLERLACRFAKEEIASEFLNTVNSCIKRAKALQGDE 2681
Query: 400 EN 401
EN
Sbjct: 2682 EN 2683
Score = 132 (51.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 271 VVVETGEENEKVVFSADSVLFEFLD--GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V TGEENE V+F + L + WKERG G +K+ + RLLMR +
Sbjct: 1616 VEVVTGEENEDVLFEHRAKLLRWDKEANEWKERGLGNMKLLRDRTDPNKVRLLMRREQVH 1675
Query: 329 RLILNASLYPDMKLTNMD--KKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 385
+L N L P+ K T K +T+ + + E + + A++F+ I ++F AV
Sbjct: 1676 KLCCNQRLLPETKFTYATNCKAAVTWGAQDYSDEELT-TALLAVRFKSQDICQQFLEAV 1733
Score = 49 (22.3 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 34/160 (21%), Positives = 56/160 (35%)
Query: 105 LESSENKVSVDANNDAGKEAEKGDGE-DNKQSESKIDEPVAVEAASSEPEKGEDESS--- 160
+E S SV + +A K ++K DG ++ ES++ + + ++P + ++
Sbjct: 2153 IEDSPVVGSVSQSTEANKPSQKNDGAAKSRGGESEVLDVGKTSSPLAKPNDYQTPATILF 2212
Query: 161 KQTE-SKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXX 219
K + S+N +KSE GK AG P +K S E
Sbjct: 2213 KGSSLSRNNSSASEASKTPSSAFIFGSTDKSEP--GKDAG---PLANLQKLASGEGQGNV 2267
Query: 220 XXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSAS 259
+N+ G F A KD S S
Sbjct: 2268 LGSIFRSGSSNENSSDGSVKFFFGGGNKAAEQQKKDSSES 2307
Score = 48 (22.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 132 NKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEP 169
+K SES V A++E +K ++E+ + +P
Sbjct: 1254 SKSSESPFSFKTQVAKAAAEKQKEQEEAEQNQSGATDP 1291
Score = 45 (20.9 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 16/48 (33%), Positives = 19/48 (39%)
Query: 240 TGFSTSTFAFGSI-PK-DGSASNSTSASVFGQEVVVETGEENEKVVFS 285
T +S+F F PK D NST+A E EE FS
Sbjct: 1974 TSIGSSSFTFSMTKPKPDQQQPNSTAAKEDEDNDSQEVEEEENNTYFS 2021
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEK 126
T +PAA L+ + + N D A K
Sbjct: 1473 TSTPAANSLINKPQEQTKTQPNPDPPATAAK 1503
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 235 TGLAGTGFSTSTFAFGSIPKDGSASNSTSA 264
T G G S+ T FG K S S SA
Sbjct: 1869 TAALGFGKSSMTSGFGDAFKPAVGSWSCSA 1898
>ZFIN|ZDB-GENE-040426-1132 [details] [associations]
symbol:ranbp3 "RAN binding protein 3" species:7955
"Danio rerio" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
ZFIN:ZDB-GENE-040426-1132 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0046907 GeneTree:ENSGT00530000063644
EMBL:AL840638 IPI:IPI00611519 Ensembl:ENSDART00000139882
OMA:TINDAEQ Bgee:F1Q591 Uniprot:F1Q591
Length = 511
Score = 158 (60.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 37/98 (37%), Positives = 56/98 (57%)
Query: 269 QEVVVETGEENEKVVFSADSVLF--EFLDGSWKERGKGELKVNVSTNA---TGRARLLMR 323
+ V V TGEE+E V LF E L SW ERG G L++N T+ T ++RL+MR
Sbjct: 334 ERVEVRTGEESESNVLQMQCKLFVFEMLSQSWVERGCGVLRLNDKTSTDDGTLQSRLVMR 393
Query: 324 ARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+G+ R+ILN L+P M++ +K + I++ +G
Sbjct: 394 TQGSLRVILNTKLWPQMQVDKASEKSLRITAIDTEEQG 431
Score = 57 (25.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 109 ENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNE 168
+N +S +++N K+ G E SE A A + E + D+S+ + E+ ++
Sbjct: 141 QNNISSNSSNGV-KKLSDGGTECEGHSE-------ASAAGTQENSESLDKSTLEPETDDK 192
Query: 169 PXXXXXXXXXXXXXXENGAEKSEVDNGKTAG--VDKPENEDEKETSH 213
P EN ++++V N + D + E+ ET++
Sbjct: 193 PEQHGAQIDASFVFGENMRDRAKVGNSLDSSQKADGLQTENSGETNY 239
>POMBASE|SPBC1773.07c [details] [associations]
symbol:sbp1 "Ran GTPase binding protein Sbp1"
species:4896 "Schizosaccharomyces pombe" [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006405 "RNA
export from nucleus" evidence=ISO] [GO:0006606 "protein import into
nucleus" evidence=ISO] [GO:0031291 "Ran protein signal
transduction" evidence=IGI] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 PomBase:SPBC1773.07c GO:GO:0005525
GO:GO:0005829 GO:GO:0005096 GO:GO:0043547 Gene3D:2.30.29.30
InterPro:IPR011993 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0006606 GO:GO:0006405 eggNOG:COG5171 HOGENOM:HOG000176323
KO:K15306 GO:GO:0031291 EMBL:D86381 EMBL:D76431 PIR:T43209
PIR:T51307 RefSeq:NP_595122.1 ProteinModelPortal:Q09717 SMR:Q09717
STRING:Q09717 EnsemblFungi:SPBC1773.07c.1 GeneID:2540142
KEGG:spo:SPBC1773.07c OMA:HTSTENA OrthoDB:EOG496327
NextBio:20801278 Uniprot:Q09717
Length = 215
Score = 150 (57.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 39/131 (29%), Positives = 65/131 (49%)
Query: 271 VVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V +T EE E V F + LF F WKERG G+ ++ + TG+ RL+MR
Sbjct: 84 VETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDARL-LKHKETGKTRLVMRRDKTL 142
Query: 329 RLILNASLYPDMKLT-NMDK-KGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAVA 386
++ N L P+MKLT N+ + + +EG+ TFA++F ++ F+
Sbjct: 143 KVCANHLLMPEMKLTPNVGSDRSWVWTVAADVSEGEPTAETFAIRFANSENANLFKENFE 202
Query: 387 AHKDKTTAVLK 397
++++ +LK
Sbjct: 203 KYQEENAKILK 213
Score = 38 (18.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 17/71 (23%), Positives = 21/71 (29%)
Query: 134 QSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVD 193
+ E K E SS ED +SKQTE EK +
Sbjct: 4 EQEKKTQGTTKEEQKSSFAS--EDVASKQTEEAKAVFGDGVAKQENKSGASTNDEKKPAE 61
Query: 194 NGKTAGVDKPE 204
+ A PE
Sbjct: 62 GDEDAEPASPE 72
>ZFIN|ZDB-GENE-040426-1627 [details] [associations]
symbol:zgc:66385 "zgc:66385" species:7955 "Danio
rerio" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
ZFIN:ZDB-GENE-040426-1627 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0046907 KO:K15304 eggNOG:NOG304969
HOVERGEN:HBG061383 GeneTree:ENSGT00530000063644
HOGENOM:HOG000290662 OrthoDB:EOG4XSKQ3 EMBL:CU693369 EMBL:CU693493
EMBL:BC059200 IPI:IPI00510763 RefSeq:NP_956984.1 UniGene:Dr.77684
SMR:Q6PCR4 Ensembl:ENSDART00000100173 GeneID:393663 KEGG:dre:393663
InParanoid:Q6PCR4 NextBio:20814669 Uniprot:Q6PCR4
Length = 525
Score = 172 (65.6 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 83/321 (25%), Positives = 142/321 (44%)
Query: 107 SSENKVSVDANN----DAGKEAEKGDGEDN---KQSESKIDEPVAVEAA----SSEPEKG 155
SSEN+ S+ NN D + EK +GE+N ++ +S + AV+++ + E+
Sbjct: 167 SSENR-SIFLNNTESSDKSPKREK-EGEENGGAQKDDSSQKKDGAVDSSFVFGQNIKERA 224
Query: 156 E-DESSKQTESKN---EPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKET 211
+ +E+S ++SK+ +P N A S D G +N E+
Sbjct: 225 KLEENSTNSDSKDSTQDPGSTNYFLQYMGSSSSNNATNSS-DKGSKFVFG--QNMSERVL 281
Query: 212 SHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSA-SNSTSASVFGQE 270
S + + T + S+ + +A + +T+ ++
Sbjct: 282 SPPKGGEVSAEASKEVSAPVSEPSSQEATPEKNHSVT-ESLEESAAAYTKATAKKCILEK 340
Query: 271 VVVETGEENEKVVFSADSVLFEFLDG--SWKERGKGELKVN--VSTN-ATGRARLLMRAR 325
V V TGEE E V LF F SW ERG+G L++N ST+ + ++RL+MR +
Sbjct: 341 VEVRTGEEAESNVLQMQCKLFVFDKPVQSWVERGRGLLRLNDMASTDDGSLQSRLVMRTQ 400
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 385
G+ RLILN L+P M++ +K + ++ TE + G+ F + AS + Q A
Sbjct: 401 GSLRLILNTKLWPQMQVDKASEKSVRITAMD--TEDQ-GVKVFLIS---ASSKDAGQLAA 454
Query: 386 AAHKDKTTAVLKTPENSPKAT 406
A H + A+ E P++T
Sbjct: 455 ALHH-RILALKSRVEQEPEST 474
>SGD|S000002409 [details] [associations]
symbol:YRB1 "Ran GTPase binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0006405 "RNA export
from nucleus" evidence=IMP] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0043547 "positive
regulation of GTPase activity" evidence=IEA] [GO:0008536 "Ran
GTPase binding" evidence=IDA] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 SGD:S000002409 GO:GO:0005634
GO:GO:0005737 GO:GO:0005096 GO:GO:0043547 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0000082 EMBL:BK006938 GO:GO:0006606
GO:GO:0006511 EMBL:Z48008 GO:GO:0008536 PDB:3M1I PDBsum:3M1I
GO:GO:0006405 eggNOG:COG5171 HOGENOM:HOG000176323 KO:K15306
OMA:HEDRDTT GeneTree:ENSGT00690000102083 OrthoDB:EOG496327 PDB:4GMX
PDB:4GPT PDB:4HAT PDB:4HAU PDB:4HAV PDB:4HAW PDB:4HAX PDB:4HAY
PDB:4HAZ PDB:4HB0 PDB:4HB2 PDB:4HB3 PDB:4HB4 PDBsum:4GMX
PDBsum:4GPT PDBsum:4HAT PDBsum:4HAU PDBsum:4HAV PDBsum:4HAW
PDBsum:4HAX PDBsum:4HAY PDBsum:4HAZ PDBsum:4HB0 PDBsum:4HB2
PDBsum:4HB3 PDBsum:4HB4 EMBL:X65925 EMBL:Z33503 EMBL:L38489
PIR:S50219 RefSeq:NP_010285.1 ProteinModelPortal:P41920 SMR:P41920
DIP:DIP-838N IntAct:P41920 MINT:MINT-398068 STRING:P41920
PaxDb:P41920 PeptideAtlas:P41920 PRIDE:P41920 EnsemblFungi:YDR002W
GeneID:851565 KEGG:sce:YDR002W CYGD:YDR002w
EvolutionaryTrace:P41920 NextBio:969007 Genevestigator:P41920
GermOnline:YDR002W Uniprot:P41920
Length = 201
Score = 141 (54.7 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARG 326
++V V+T EE+E+V++ + LF F D WKERG G+ K + T + R+LMR
Sbjct: 72 EKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKF-LKNKKTNKVRILMRRDK 130
Query: 327 NYRLILNASLYPDMKLT-NMDK-KGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 382
++ N + P+ L N+ + +AC EG++ TFA++F ++F+
Sbjct: 131 TLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFK 188
Score = 43 (20.2 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 195 GKTAGVDKPENE-DEKETSHET 215
GK A +KPE + DE++T ET
Sbjct: 31 GKKA--EKPETKKDEEDTKEET 50
Score = 38 (18.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 149 SSEPEKGEDESSKQTESKNE 168
+ +PE +DE + E+K E
Sbjct: 34 AEKPETKKDEEDTKEETKKE 53
>UNIPROTKB|G4N530 [details] [associations]
symbol:MGG_05203 "Ran-specific GTPase-activating protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
EMBL:CM001233 GO:GO:0000082 GO:GO:0006606 GO:GO:0006511
GO:GO:0006405 KO:K15306 RefSeq:XP_003712748.1
ProteinModelPortal:G4N530 SMR:G4N530 EnsemblFungi:MGG_05203T0
GeneID:2675675 KEGG:mgr:MGG_05203 Uniprot:G4N530
Length = 247
Score = 148 (57.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFL-DGS-WKERGKGELKVNVSTNATGRARLLMRARG 326
++V V+T EE+E+ +F + LF+F+ D S WKERG G++++ + G+ RL+MR
Sbjct: 88 EKVEVKTNEESEEQLFKMRAKLFKFVKDTSEWKERGTGDVRL-LKHRENGKTRLVMRRDK 146
Query: 327 NYRLILNASLYPDMKLT-NM--DKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQT 383
++ N + P+MKL+ N+ D+ + A + +EG+ T A++F ++ F+
Sbjct: 147 TLKVCANHYIIPEMKLSPNVGSDRSWVWNAAAD-VSEGEPEGVTLAIRFANSENANSFKD 205
Query: 384 A-VAAHKDKTTAVLKTP-ENSPKATDD 408
A + A KD K+ E + A ++
Sbjct: 206 AFLQAQKDNAALFGKSEAETAAPAAEE 232
Score = 45 (20.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 116 ANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDE 158
++ DA K E G ++ K S D ++ ++ EK EDE
Sbjct: 2 SSTDATKPVEAGKPDETKPVTS--DAVFSMFGGGAKKEKKEDE 42
>ASPGD|ASPL0000058693 [details] [associations]
symbol:AN0084 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008536 "Ran GTPase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0031291 "Ran protein signal transduction"
evidence=IEA] [GO:0006405 "RNA export from nucleus" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 EMBL:BN001308 GO:GO:0005622
GO:GO:0046907 EMBL:AACD01000003 eggNOG:COG5171 HOGENOM:HOG000176323
KO:K15306 OrthoDB:EOG496327 OMA:ETGANED RefSeq:XP_657688.1
ProteinModelPortal:Q5BH96 SMR:Q5BH96 STRING:Q5BH96
EnsemblFungi:CADANIAT00002666 GeneID:2875862 KEGG:ani:AN0084.2
Uniprot:Q5BH96
Length = 242
Score = 136 (52.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS--WKERGKGELKVNVSTNATGRARLLMRARG 326
+ V V+T EE E+ F + LF F S WKERG G++++ + G+ RL+MR
Sbjct: 110 ETVEVKTNEELEEQTFKMRAKLFRFDRDSKEWKERGTGDVRL-LKHKENGKTRLVMRRDK 168
Query: 327 NYRLILNASLYPDMKLT-NM--DKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQT 383
++ N + PDMKL+ N+ D+ + A + +EG+ T A++F ++ F+
Sbjct: 169 TLKVCANHYIVPDMKLSPNVGSDRSWVWNAAAD-VSEGEPEAQTLAIRFANSENANLFKE 227
Query: 384 AVAAHKDKTTAVLK 397
A +++ + K
Sbjct: 228 AFDKAREENEKLFK 241
Score = 58 (25.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 21/93 (22%), Positives = 37/93 (39%)
Query: 126 KGDGEDNKQSESKIDEPVAV-EAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXE 184
K D Q E+K +E E + +E K ES+ +T K+
Sbjct: 8 KPDPATKAQEETKPEETTTTTEPSKTEEVKEAAESAAETV-KDAATKTSDSVFSMFGGGP 66
Query: 185 NGAEKSEVDNGKTAGVDKPENEDEKETSHETTD 217
+K E D + +G K + +++E + E+ D
Sbjct: 67 KKEKKEEEDVDEPSGSSKAQKAEDEEEAPESPD 99
>UNIPROTKB|F1PS48 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 OMA:EQEAKMP GeneTree:ENSGT00530000063644
EMBL:AAEX03012504 EMBL:AAEX03012503 Ensembl:ENSCAFT00000029752
Uniprot:F1PS48
Length = 557
Score = 150 (57.9 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 40/117 (34%), Positives = 65/117 (55%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELK 307
S+ + +A + +T+ ++V V TGEE E V LF F SW ERG+G L+
Sbjct: 360 SLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQIQCKLFVFDKASQSWVERGRGLLR 419
Query: 308 VN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 420 LNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 476
Score = 54 (24.1 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 107 SSENKVSVDANNDAGKEAEK---GDGEDNKQSESKIDEPVAVEAASSEPE 153
S+E K D+ + EAE G G E ++ P A++S PE
Sbjct: 28 SAEQKDLSDSGEEPRGEAEAPHHGTGHPESAGEHALEPPAPASASASTPE 77
>UNIPROTKB|Q9H6Z4 [details] [associations]
symbol:RANBP3 "Ran-binding protein 3" species:9606 "Homo
sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0070412 "R-SMAD binding"
evidence=IPI] [GO:0008536 "Ran GTPase binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:wnt_canonical_pathway Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015031 GO:GO:0046907 GO:GO:0008536
EMBL:AC004602 KO:K15304 EMBL:Y08697 EMBL:Y08698 EMBL:AK025300
EMBL:AK314343 EMBL:AL050149 EMBL:AC104532 EMBL:AC093050
EMBL:AC005784 EMBL:BC004349 IPI:IPI00026337 IPI:IPI00179121
IPI:IPI00456728 IPI:IPI00456729 PIR:T08778 RefSeq:NP_003615.2
RefSeq:NP_015559.2 RefSeq:NP_015561.1 UniGene:Hs.531752 PDB:2CRF
PDB:2Y8F PDB:2Y8G PDBsum:2CRF PDBsum:2Y8F PDBsum:2Y8G
ProteinModelPortal:Q9H6Z4 SMR:Q9H6Z4 IntAct:Q9H6Z4 STRING:Q9H6Z4
PhosphoSite:Q9H6Z4 DMDM:51316528 PaxDb:Q9H6Z4 PeptideAtlas:Q9H6Z4
PRIDE:Q9H6Z4 Ensembl:ENST00000034275 Ensembl:ENST00000340578
Ensembl:ENST00000439268 GeneID:8498 KEGG:hsa:8498 UCSC:uc002mdv.3
UCSC:uc002mdx.3 UCSC:uc002mdy.3 CTD:8498 GeneCards:GC19M005916
HGNC:HGNC:9850 HPA:HPA043375 HPA:HPA043389 MIM:603327
neXtProt:NX_Q9H6Z4 PharmGKB:PA34211 eggNOG:NOG304969
HOVERGEN:HBG061383 InParanoid:Q9H6Z4 OMA:EQEAKMP PhylomeDB:Q9H6Z4
ChiTaRS:RANBP3 EvolutionaryTrace:Q9H6Z4 GenomeRNAi:8498
NextBio:31793 ArrayExpress:Q9H6Z4 Bgee:Q9H6Z4 CleanEx:HS_RANBP3
Genevestigator:Q9H6Z4 GermOnline:ENSG00000031823 Uniprot:Q9H6Z4
Length = 567
Score = 150 (57.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/117 (34%), Positives = 65/117 (55%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELK 307
S+ + +A + +T+ ++V V TGEE E V LF F SW ERG+G L+
Sbjct: 368 SLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLR 427
Query: 308 VN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 428 LNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 484
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 116 ANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASS----EPEKGEDESS 160
A AG + +G GED+ + + PV E SS P + E+ SS
Sbjct: 93 AGRSAGGSSPEG-GEDSDREDGNYCPPVKRERTSSLTQFPPSQSEERSS 140
Score = 43 (20.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 108 SENKVSVDANNDAGKEAEK---GDGEDNKQSESKIDEPVAVEAASSEP 152
+E K D+ + EAE G G E ++ P A++S P
Sbjct: 29 AEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHALEPPAPAGASASTP 76
Score = 41 (19.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 5 ESALPPSKKRAAGRELSRDNP 25
E+ LPP + AGR +P
Sbjct: 82 EAQLPPFPRELAGRSAGGSSP 102
>FB|FBgn0039110 [details] [associations]
symbol:RanBP3 "Ran binding protein 3" species:7227
"Drosophila melanogaster" [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IDA] [GO:0051168 "nuclear
export" evidence=IMP] [GO:0006611 "protein export from nucleus"
evidence=IMP] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 EMBL:AE014297 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0030178 GO:GO:0006611 KO:K15304 CTD:8498
eggNOG:NOG304969 GeneTree:ENSGT00530000063644 EMBL:AY069314
RefSeq:NP_651178.1 UniGene:Dm.1298 SMR:Q9VCI7 IntAct:Q9VCI7
MINT:MINT-861214 STRING:Q9VCI7 EnsemblMetazoa:FBtr0084468
GeneID:42804 KEGG:dme:Dmel_CG10225 UCSC:CG10225-RA
FlyBase:FBgn0039110 InParanoid:Q9VCI7 OMA:NWEERGR OrthoDB:EOG4N5TCP
GenomeRNAi:42804 NextBio:830655 Uniprot:Q9VCI7
Length = 449
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 30/90 (33%), Positives = 52/90 (57%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
+EV TGEE+E + LF FL+ +W+ERG+G L++N + + G +R++ R GN
Sbjct: 237 EEVETFTGEEDEINIIDVSCKLFAFLNSNWEERGRGSLRLNDAKDLRGDSRVVFRTSGNL 296
Query: 329 RLILNASLYPDMKLTNMDKKGITFACINSA 358
RL+LN ++ M +K + I+++
Sbjct: 297 RLLLNTKVWAAMVAERASQKSLRLTAIDNS 326
>UNIPROTKB|B7Z7F3 [details] [associations]
symbol:RANBP3 "Ran-binding protein 3" species:9606 "Homo
sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046907 EMBL:AC004602 EMBL:AC093050 EMBL:AC005784
IPI:IPI00456729 UniGene:Hs.531752 HGNC:HGNC:9850 HOVERGEN:HBG061383
HOGENOM:HOG000290662 EMBL:AK301942 ProteinModelPortal:B7Z7F3
STRING:B7Z7F3 PRIDE:B7Z7F3 Ensembl:ENST00000591092 UCSC:uc002mdz.3
ArrayExpress:B7Z7F3 Bgee:B7Z7F3 Uniprot:B7Z7F3
Length = 494
Score = 150 (57.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 40/117 (34%), Positives = 65/117 (55%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELK 307
S+ + +A + +T+ ++V V TGEE E V LF F SW ERG+G L+
Sbjct: 295 SLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLR 354
Query: 308 VN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 355 LNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 411
Score = 47 (21.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 120 AGKEAEKGDGEDNKQSESKIDEPVAVEAASS----EPEKGEDESS 160
AG + +G GED+ + + PV E SS P + E+ SS
Sbjct: 29 AGGSSPEG-GEDSDREDGNYCPPVKRERTSSLTQFPPSQSEERSS 72
>UNIPROTKB|F1SBU0 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046907 GeneTree:ENSGT00530000063644
EMBL:FP089464 Ensembl:ENSSSCT00000014780 OMA:ANRETIA Uniprot:F1SBU0
Length = 290
Score = 150 (57.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/117 (34%), Positives = 65/117 (55%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELK 307
S+ + +A + +T+ ++V V TGEE E V LF F SW ERG+G L+
Sbjct: 92 SLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQIQCKLFVFDKTSQSWVERGRGLLR 151
Query: 308 VN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 152 LNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 208
>CGD|CAL0005670 [details] [associations]
symbol:YRB1 species:5476 "Candida albicans" [GO:0007264
"small GTPase mediated signal transduction" evidence=IGI]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005096 "GTPase activator
activity" evidence=ISS] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISS] [GO:0006913 "nucleocytoplasmic
transport" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0031291 "Ran protein signal transduction"
evidence=IEA] [GO:0006405 "RNA export from nucleus" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
CGD:CAL0005670 GO:GO:0005634 GO:GO:0005737 GO:GO:0007264
GO:GO:0000226 GO:GO:0005096 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0006913 GO:GO:0008536 EMBL:AACQ01000039 eggNOG:COG5171
KO:K15306 RefSeq:XP_718634.1 ProteinModelPortal:Q5AAL2 SMR:Q5AAL2
STRING:Q5AAL2 GeneID:3639663 KEGG:cal:CaO19.7477 Uniprot:Q5AAL2
Length = 212
Score = 129 (50.5 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS--WKERGKGELKVNVSTNATGRARLLMRARG 326
++V V+T EE+E+V++ + LF F S WKERG G++K + TG+ R+LMR
Sbjct: 83 KKVDVKTNEEDEEVLYKVRAKLFRFHGDSKEWKERGTGDVKF-LKHKTTGKVRILMRRDK 141
Query: 327 NYRLILNASLYPDMKLT-NMDK-KGITFACINSATEGKSGLSTFALKF---RDASIVEE- 380
++ N + D +L N+ + + +EG+ T A++F +A + +E
Sbjct: 142 TLKICANHLISADYELKPNIGSDRSWVYTVTADVSEGEPEAQTLAIRFGNKENADLFKEH 201
Query: 381 FQTAVA-AHKD 390
F A A KD
Sbjct: 202 FDNAKKEAKKD 212
Score = 51 (23.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESK 138
E S+NK D + K+ K G+DN+ +E +
Sbjct: 39 EDSDNKKESDKKEE--KDTSKSTGDDNEVAEEE 69
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 122 KEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESS 160
K+ E+ D ++ K+S+ K +E ++ + E E+E +
Sbjct: 34 KKPEQEDSDNKKESDKK-EEKDTSKSTGDDNEVAEEEEA 71
Score = 43 (20.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/68 (19%), Positives = 31/68 (45%)
Query: 151 EPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKP----ENE 206
+PE+ + ++ K+++ K E E E+++V+ +DK NE
Sbjct: 35 KPEQEDSDNKKESDKKEEKDTSKSTGDDNEVAEE---EEADVEFTPVVQLDKKVDVKTNE 91
Query: 207 DEKETSHE 214
+++E ++
Sbjct: 92 EDEEVLYK 99
Score = 40 (19.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 188 EKSEVDNGKTAGVDKPENEDEKETSHETT 216
+K E D K+ G D E +E+E E T
Sbjct: 49 KKEEKDTSKSTGDDN-EVAEEEEADVEFT 76
Score = 40 (19.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSE 151
+ + K ++D KE++K + +D +S +E E A E
Sbjct: 30 AKKEKKPEQEDSDNKKESDKKEEKDTSKSTGDDNEVAEEEEADVE 74
>UNIPROTKB|Q5AAL2 [details] [associations]
symbol:YRB1 "Putative uncharacterized protein YRB1"
species:237561 "Candida albicans SC5314" [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0005096 "GTPase
activator activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IGI] [GO:0008536 "Ran
GTPase binding" evidence=ISS] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISS] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 CGD:CAL0005670 GO:GO:0005634
GO:GO:0005737 GO:GO:0007264 GO:GO:0000226 GO:GO:0005096
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006913 GO:GO:0008536
EMBL:AACQ01000039 eggNOG:COG5171 KO:K15306 RefSeq:XP_718634.1
ProteinModelPortal:Q5AAL2 SMR:Q5AAL2 STRING:Q5AAL2 GeneID:3639663
KEGG:cal:CaO19.7477 Uniprot:Q5AAL2
Length = 212
Score = 129 (50.5 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS--WKERGKGELKVNVSTNATGRARLLMRARG 326
++V V+T EE+E+V++ + LF F S WKERG G++K + TG+ R+LMR
Sbjct: 83 KKVDVKTNEEDEEVLYKVRAKLFRFHGDSKEWKERGTGDVKF-LKHKTTGKVRILMRRDK 141
Query: 327 NYRLILNASLYPDMKLT-NMDK-KGITFACINSATEGKSGLSTFALKF---RDASIVEE- 380
++ N + D +L N+ + + +EG+ T A++F +A + +E
Sbjct: 142 TLKICANHLISADYELKPNIGSDRSWVYTVTADVSEGEPEAQTLAIRFGNKENADLFKEH 201
Query: 381 FQTAVA-AHKD 390
F A A KD
Sbjct: 202 FDNAKKEAKKD 212
Score = 51 (23.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESK 138
E S+NK D + K+ K G+DN+ +E +
Sbjct: 39 EDSDNKKESDKKEE--KDTSKSTGDDNEVAEEE 69
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 122 KEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESS 160
K+ E+ D ++ K+S+ K +E ++ + E E+E +
Sbjct: 34 KKPEQEDSDNKKESDKK-EEKDTSKSTGDDNEVAEEEEA 71
Score = 43 (20.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/68 (19%), Positives = 31/68 (45%)
Query: 151 EPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKP----ENE 206
+PE+ + ++ K+++ K E E E+++V+ +DK NE
Sbjct: 35 KPEQEDSDNKKESDKKEEKDTSKSTGDDNEVAEE---EEADVEFTPVVQLDKKVDVKTNE 91
Query: 207 DEKETSHE 214
+++E ++
Sbjct: 92 EDEEVLYK 99
Score = 40 (19.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 188 EKSEVDNGKTAGVDKPENEDEKETSHETT 216
+K E D K+ G D E +E+E E T
Sbjct: 49 KKEEKDTSKSTGDDN-EVAEEEEADVEFT 76
Score = 40 (19.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSE 151
+ + K ++D KE++K + +D +S +E E A E
Sbjct: 30 AKKEKKPEQEDSDNKKESDKKEEKDTSKSTGDDNEVAEEEEADVE 74
>SGD|S000001325 [details] [associations]
symbol:YRB2 "Protein of unknown function involved in
Ran-GTPase nuclear processes" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006611 "protein export
from nucleus" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0031938 "regulation of chromatin silencing at telomere"
evidence=IMP] [GO:0005643 "nuclear pore" evidence=IDA] [GO:0046907
"intracellular transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISM] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0000056 "ribosomal small subunit export
from nucleus" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
SGD:S000001325 GO:GO:0005096 GO:GO:0043547 Gene3D:2.30.29.30
InterPro:IPR011993 EMBL:BK006942 GO:GO:0005643 GO:GO:0006611
GO:GO:0000056 EMBL:Z38060 GO:GO:0031938 KO:K15304 OrthoDB:EOG40VZZ8
eggNOG:NOG304969 GeneTree:ENSGT00530000063644 EMBL:AY557879
PIR:S48416 RefSeq:NP_012201.1 ProteinModelPortal:P40517 SMR:P40517
DIP:DIP-2243N IntAct:P40517 MINT:MINT-486244 STRING:P40517
PaxDb:P40517 PeptideAtlas:P40517 EnsemblFungi:YIL063C GeneID:854747
KEGG:sce:YIL063C CYGD:YIL063c HOGENOM:HOG000141982 OMA:GEESEEC
NextBio:977473 Genevestigator:P40517 GermOnline:YIL063C
Uniprot:P40517
Length = 327
Score = 128 (50.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVSTNATGRARLLMRARG 326
Q+ V++GEE+E+ ++ ++ L++ + WKERG G +K+N S + + R++MR+RG
Sbjct: 201 QKQEVKSGEESEECIYQVNAKLYQLSNIKEGWKERGVGIIKINKSKDDVEKTRIVMRSRG 260
Query: 327 NYRLILNASL 336
++ILN L
Sbjct: 261 ILKVILNIQL 270
Score = 63 (27.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDE 158
E+S+ + + N++ KE K D E + + + K+D+ VE+ E +K ED+
Sbjct: 46 ETSDKSEAPNKNDEEKKEEGKKDQEPSHK-KIKVDDGKTVESGIVEDDKKEDK 97
Score = 53 (23.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 125 EKGDGEDNKQSESKIDEPVAVEAASSE-PEKGEDESSKQTESKNEP 169
+K DG + E DE + SE P K ++E ++ + EP
Sbjct: 26 DKLDGTPKRPREKDQDEQAEETSDKSEAPNKNDEEKKEEGKKDQEP 71
Score = 44 (20.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 184 ENGAEK-SEVDN--GKTAGVDK-PENEDEKETSHETTD 217
EN K + V+N K G K P +D+ E + ET+D
Sbjct: 12 ENSEVKQTAVENPIDKLDGTPKRPREKDQDEQAEETSD 49
>ASPGD|ASPL0000004916 [details] [associations]
symbol:AN10754 species:162425 "Emericella nidulans"
[GO:0046907 "intracellular transport" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
EMBL:BN001301 GO:GO:0046907 ProteinModelPortal:C8V3J6
EnsemblFungi:CADANIAT00007105 HOGENOM:HOG000163580 OMA:AFAGSEQ
Uniprot:C8V3J6
Length = 493
Score = 143 (55.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 273 VETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGR----ARLLMRARGNY 328
+ETGEE EK F+ + LF F + W+ERG G KVNV AR++MRA G
Sbjct: 369 IETGEEQEKTYFTCKAKLFHFSNKEWRERGLGTFKVNVKVTDDVEDKKGARMIMRADGVG 428
Query: 329 RLILNASLYPDMKL 342
R++LN L+ MK+
Sbjct: 429 RVMLNTPLFKGMKV 442
Score = 52 (23.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 105 LESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEK 154
L+ E KV D +AE D +N++S K A A EPEK
Sbjct: 140 LDKDEAKVE-----DKAAKAEVKDSSENRESAEKT---AATATAEGEPEK 181
>UNIPROTKB|F5H4C2 [details] [associations]
symbol:RANBP3 "Ran-binding protein 3" species:9606 "Homo
sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046907 EMBL:AC004602 EMBL:AC093050 EMBL:AC005784
HGNC:HGNC:9850 ChiTaRS:RANBP3 IPI:IPI01010773
ProteinModelPortal:F5H4C2 SMR:F5H4C2 Ensembl:ENST00000541471
UCSC:uc010xix.2 ArrayExpress:F5H4C2 Bgee:F5H4C2 Uniprot:F5H4C2
Length = 439
Score = 150 (57.9 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 40/117 (34%), Positives = 65/117 (55%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELK 307
S+ + +A + +T+ ++V V TGEE E V LF F SW ERG+G L+
Sbjct: 240 SLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLR 299
Query: 308 VN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 300 LNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 356
>POMBASE|SPCC18B5.07c [details] [associations]
symbol:nup61 "nucleoporin Nup61" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IDA] [GO:0006913 "nucleocytoplasmic
transport" evidence=TAS] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR000156
InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196
SMART:SM00160 PomBase:SPCC18B5.07c GO:GO:0007094 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0006913
GO:GO:0051028 OrthoDB:EOG4ZSDCT EMBL:AB027958 PIR:T41200
RefSeq:NP_587937.2 STRING:Q9USL4 PRIDE:Q9USL4
EnsemblFungi:SPCC18B5.07c.1 GeneID:2539348 eggNOG:NOG303174
NextBio:20800513 Uniprot:Q9USL4
Length = 549
Score = 138 (53.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 276 GEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILN 333
GEENE VF + ++ F S+ + G G LK+NV + TG AR+L R G+ +L+LN
Sbjct: 432 GEENEDSVFETRAKIYRFDATSKSYSDIGIGPLKINVDRD-TGSARILARVEGSGKLLLN 490
Query: 334 ASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEE 380
L D + + KK + ++T+GKS + + ++ ++ S E+
Sbjct: 491 VRLCQDFEYSLAGKKDVKVPA--ASTDGKS-IEMYLIRVKEPSTAEK 534
Score = 56 (24.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 32/139 (23%), Positives = 52/139 (37%)
Query: 42 KKATDEVLATRRIVKV--RRNQTASTPSSNPFAGIRLXXXXXXXXXXXXXXXXXXKTVS- 98
K+A+ +V+ATR+I K R+ T+ S FA + T +
Sbjct: 29 KEASADVMATRKIAKPKSRKRPTSGVSSPGIFANLAAKPVSLPASTTQFTFGKPAVTANN 88
Query: 99 PAATELLESSENKVSVDA------NNDAGKEAEKGD-------GEDNKQSESKIDEPVAV 145
+ L + NK +DA NN G + D + K +E + V
Sbjct: 89 DSDIHLKKRGLNKSFIDAVIKSVDNNPFGNLSPLFDEYRQHFSSIEKKPAEEQPTSNAVV 148
Query: 146 EAASSEPEKGEDESSKQTE 164
+ + +K +D SS TE
Sbjct: 149 SEVNPQQQKSQDSSSFVTE 167
Score = 55 (24.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 116 ANNDAGKEAEKG-DGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESK 166
A+ DA KE ++ + +D+K ESK E A EP KG S T K
Sbjct: 278 ASADASKETKQTHETKDSKSEESKPSNNEKSENAV-EPAKGNTMSFSWTPDK 328
Score = 51 (23.0 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKI--DEPVAVEAASSEPE 153
T +P + +SS S A+ A K E +G ++Q E + DE + ++ S
Sbjct: 371 TTNPFSFAAPKSSFPTSSTPASVGAEKSEETSNGNKSEQEEKENGNDETRSNDSLVSGKG 430
Query: 154 KGEDESSKQTESK 166
KGE+ E++
Sbjct: 431 KGEENEDSVFETR 443
Score = 39 (18.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKI 139
K+ P ++ K +N + ++ EK +G D +S +
Sbjct: 381 KSSFPTSSTPASVGAEKSEETSNGNKSEQEEKENGNDETRSNDSL 425
>UNIPROTKB|F1PS47 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 GeneTree:ENSGT00530000063644 EMBL:AAEX03012504
EMBL:AAEX03012503 Ensembl:ENSCAFT00000029754 Uniprot:F1PS47
Length = 490
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 40/117 (34%), Positives = 65/117 (55%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELK 307
S+ + +A + +T+ ++V V TGEE E V LF F SW ERG+G L+
Sbjct: 293 SLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQIQCKLFVFDKASQSWVERGRGLLR 352
Query: 308 VN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 353 LNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 409
>UNIPROTKB|Q24K04 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046907 KO:K15304 CTD:8498
eggNOG:NOG304969 HOVERGEN:HBG061383 OMA:EQEAKMP
GeneTree:ENSGT00530000063644 HOGENOM:HOG000290662 OrthoDB:EOG4XSKQ3
EMBL:DAAA02019573 EMBL:DAAA02019574 EMBL:BC114095 IPI:IPI00710525
RefSeq:NP_001068837.1 UniGene:Bt.7458 SMR:Q24K04 STRING:Q24K04
Ensembl:ENSBTAT00000044550 GeneID:508641 KEGG:bta:508641
InParanoid:Q24K04 NextBio:20868616 Uniprot:Q24K04
Length = 518
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/117 (34%), Positives = 65/117 (55%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELK 307
S+ + +A + +T+ ++V V TGEE E V LF F SW ERG+G L+
Sbjct: 320 SLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQIQCKLFVFDKTSQSWVERGRGLLR 379
Query: 308 VN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 380 LNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQMDKASEKSIRITAMDTEDQG 436
>GENEDB_PFALCIPARUM|PFD0950w [details] [associations]
symbol:PFD0950w "ran binding protein 1"
species:5833 "Plasmodium falciparum" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] InterPro:IPR000156
Pfam:PF00638 PROSITE:PS50196 SMART:SM00160 GO:GO:0005525
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006260 GO:GO:0003924
GO:GO:0005622 GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351504.1
HSSP:P43487 ProteinModelPortal:Q76NN6 IntAct:Q76NN6
MINT:MINT-1591311 EnsemblProtists:PFD0950w:mRNA GeneID:812489
KEGG:pfa:PFD0950w EuPathDB:PlasmoDB:PF3D7_0419600 KO:K03864
OMA:YANEESP ProtClustDB:CLSZ2432092 Uniprot:Q76NN6
Length = 280
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
+EV ++TGEE+E + +S S L+ +++G WKERG GE K+ + G R L+R
Sbjct: 27 KEVEIKTGEEDESLFWSGRSKLYRWVEGEWKERGLGESKLLLHKKK-GIIRFLLRQEKTL 85
Query: 329 RLILNASLYPD---MKLT-NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 382
+++ N +YP+ KL N + I + E + + FALKF A + F+
Sbjct: 86 KVVANHYIYPNESYCKLVPNAGSEKIYAWTVKDFAE-EPKIEQFALKFNTADAAKLFK 142
>UNIPROTKB|Q76NN6 [details] [associations]
symbol:PFD0950w "Ran binding protein 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 GO:GO:0005525 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006260 GO:GO:0003924 GO:GO:0005622
GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351504.1 HSSP:P43487
ProteinModelPortal:Q76NN6 IntAct:Q76NN6 MINT:MINT-1591311
EnsemblProtists:PFD0950w:mRNA GeneID:812489 KEGG:pfa:PFD0950w
EuPathDB:PlasmoDB:PF3D7_0419600 KO:K03864 OMA:YANEESP
ProtClustDB:CLSZ2432092 Uniprot:Q76NN6
Length = 280
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
+EV ++TGEE+E + +S S L+ +++G WKERG GE K+ + G R L+R
Sbjct: 27 KEVEIKTGEEDESLFWSGRSKLYRWVEGEWKERGLGESKLLLHKKK-GIIRFLLRQEKTL 85
Query: 329 RLILNASLYPD---MKLT-NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 382
+++ N +YP+ KL N + I + E + + FALKF A + F+
Sbjct: 86 KVVANHYIYPNESYCKLVPNAGSEKIYAWTVKDFAE-EPKIEQFALKFNTADAAKLFK 142
>UNIPROTKB|F1NJ42 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0070412 "R-SMAD binding"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046907 OMA:EQEAKMP
GeneTree:ENSGT00530000063644 EMBL:AADN02063513 EMBL:AADN02063514
IPI:IPI00587308 Ensembl:ENSGALT00000000806 Uniprot:F1NJ42
Length = 513
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 67/282 (23%), Positives = 117/282 (41%)
Query: 98 SPAATELLESSENKVSVDANNDAG----KEAEK-GDGEDNKQSESKIDEPVAVEAASSEP 152
S A +E L ++ K S D+ + AG KE+ D + +++E + +
Sbjct: 159 SAATSESLSNTTLKSS-DSEDKAGECQKKESNSTSDDDSGEKAELNAQQAFVFGQNLRDR 217
Query: 153 EKGEDESSKQTESKNE-------PXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPEN 205
K DES + +N P EN ++ + K +N
Sbjct: 218 VKLGDESDDTADVQNAGLPTSDAPSATNYFLQYISSSIENSTNSADASSNKFVF---GQN 274
Query: 206 EDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSA-SNSTSA 264
E+ S ++ T++ + + +T S+ + +A + +T+
Sbjct: 275 MSERVLSPPKSNEGSTESNKENAATESG----SESSSQEATPEKESLAESAAAYTKATAR 330
Query: 265 SVFGQEVVVETGEENEKVVFSADSVLFEFLDGS--WKERGKGELKVN--VSTN-ATGRAR 319
+V V TGEE E V LF F S W ERG+G L++N ST+ T ++R
Sbjct: 331 KCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVERGRGLLRLNDMASTDDGTLQSR 390
Query: 320 LLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
L+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 391 LVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 432
>UNIPROTKB|P48820 [details] [associations]
symbol:RANBP2 "E3 SUMO-protein ligase RanBP2" species:9913
"Bos taurus" [GO:0044615 "nuclear pore nuclear basket"
evidence=ISS] [GO:0042405 "nuclear inclusion body" evidence=ISS]
[GO:0031965 "nuclear membrane" evidence=ISS] [GO:0016925 "protein
sumoylation" evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 InterPro:IPR002130
InterPro:IPR020892 Pfam:PF00160 Pfam:PF00638 PRINTS:PR00153
PROSITE:PS00170 PROSITE:PS50072 PROSITE:PS50196 SMART:SM00160
UniPathway:UPA00886 GO:GO:0006457 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0016874 GO:GO:0015031 GO:GO:0005643
GO:GO:0046907 GO:GO:0051028 GO:GO:0016925 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 eggNOG:COG5171 EMBL:L41691
EMBL:L41692 IPI:IPI00711969 IPI:IPI00837553 UniGene:Bt.4771
ProteinModelPortal:P48820 SMR:P48820 STRING:P48820 PRIDE:P48820
HOGENOM:HOG000089994 InParanoid:P48820 OrthoDB:EOG4J3WG2
InterPro:IPR022011 Pfam:PF12185 Uniprot:P48820
Length = 1085
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 48/147 (32%), Positives = 75/147 (51%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 185 VEVSSGEENEQVVFSHRAKLYRYDKDAGQWKERGIGDIKI-LQNYENKQVRIVMRRDQVL 243
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 244 KLCANHRITPDMTLQNMKGTERVWVWTAC--DFADGERKIEHLAVRFKLQDVADSFKKIF 301
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ VA KD T V + TP SP
Sbjct: 302 DEAKVAQEKDFLITPHVARSATPRESP 328
>MGI|MGI:1919060 [details] [associations]
symbol:Ranbp3 "RAN binding protein 3" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=ISO]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
MGI:MGI:1919060 GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015031 GO:GO:0046907 KO:K15304 CTD:8498
eggNOG:NOG304969 HOVERGEN:HBG061383 OMA:EQEAKMP ChiTaRS:RANBP3
EMBL:AK011541 EMBL:AK133949 EMBL:AK134696 EMBL:AK155301
EMBL:AK167731 EMBL:BC145892 EMBL:BC145894 IPI:IPI00135190
RefSeq:NP_082209.1 UniGene:Mm.29608 UniGene:Mm.469805
ProteinModelPortal:Q9CT10 SMR:Q9CT10 STRING:Q9CT10
PhosphoSite:Q9CT10 PaxDb:Q9CT10 PRIDE:Q9CT10
Ensembl:ENSMUST00000002445 GeneID:71810 KEGG:mmu:71810
UCSC:uc008dcv.1 GeneTree:ENSGT00530000063644 HOGENOM:HOG000290662
InParanoid:A6H6I9 OrthoDB:EOG4XSKQ3 NextBio:334576 Bgee:Q9CT10
CleanEx:MM_RANBP3 Genevestigator:Q9CT10
GermOnline:ENSMUSG00000002372 Uniprot:Q9CT10
Length = 491
Score = 147 (56.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 40/117 (34%), Positives = 65/117 (55%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELK 307
S+ + +A + +T+ + ++V V TGEE E V LF F SW ERG+G L+
Sbjct: 292 SLAESAAAYTKATAWTCLLEKVEVITGEEAESNVLQIQCKLFVFDKTSQSWVERGRGLLR 351
Query: 308 VN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I ++ +G
Sbjct: 352 LNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQMDKASEKSIRITATDAEDQG 408
Score = 40 (19.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 147 AASSEPEKGED 157
A SS PE GED
Sbjct: 29 AGSSSPEAGED 39
>UNIPROTKB|K7EIJ4 [details] [associations]
symbol:RANBP3 "Ran-binding protein 3" species:9606 "Homo
sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 EMBL:AC004602 EMBL:AC093050
EMBL:AC005784 HGNC:HGNC:9850 Ensembl:ENST00000587479 Uniprot:K7EIJ4
Length = 155
Score = 122 (48.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 290 LFEFLDGSWKERGKGELKVN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMD 346
+F+ SW ERG+G L++N ST+ T ++RL+MR +G+ RLILN L+ M++
Sbjct: 7 VFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKAS 66
Query: 347 KKGITFACINSATEG 361
+K I +++ +G
Sbjct: 67 EKSIRITAMDTEDQG 81
>UNIPROTKB|Q7Z3J3 [details] [associations]
symbol:RGPD4 "RanBP2-like and GRIP domain-containing
protein 4" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 eggNOG:COG5171 HOGENOM:HOG000089994
OrthoDB:EOG4J3WG2 HOVERGEN:HBG108404 EMBL:BX537861 EMBL:AC009963
EMBL:AC096655 IPI:IPI00375793 IPI:IPI00879540 RefSeq:NP_872394.2
UniGene:Hs.449164 ProteinModelPortal:Q7Z3J3 SMR:Q7Z3J3
IntAct:Q7Z3J3 STRING:Q7Z3J3 PhosphoSite:Q7Z3J3 DMDM:166225161
PaxDb:Q7Z3J3 PRIDE:Q7Z3J3 Ensembl:ENST00000408999 GeneID:285190
KEGG:hsa:285190 UCSC:uc002tdu.3 CTD:285190 GeneCards:GC02P108443
H-InvDB:HIX0024221 HGNC:HGNC:32417 MIM:612707 neXtProt:NX_Q7Z3J3
PharmGKB:PA142671073 InParanoid:Q7Z3J3 PhylomeDB:Q7Z3J3
GenomeRNAi:285190 NextBio:95333 ArrayExpress:Q7Z3J3 Bgee:Q7Z3J3
CleanEx:HS_RGPD4 Genevestigator:Q7Z3J3 Uniprot:Q7Z3J3
Length = 1758
Score = 155 (59.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 48/147 (32%), Positives = 75/147 (51%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENEKVVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1345 VEVSSGEENEKVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1403
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N ++ PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1404 KLCANHTITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1461
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1462 DEAKTAQEKDSLITPHVSRSSTPRESP 1488
Score = 130 (50.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 40/120 (33%), Positives = 60/120 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + GEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1046 EKVELVIGEEGEKVLYSQGVKLFRF-DAEVRQWKERGLGNLKI-LKNEVNGKPRMLMRRE 1103
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + G A + SA++ G + L A KF+ + EEF+
Sbjct: 1104 QVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFK 1161
Score = 43 (20.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+ EKE S + + +N G+ G ++STF F +
Sbjct: 921 DGFKFGISEPGNQ-EKE-SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 976
Query: 254 KDGS 257
K S
Sbjct: 977 KSTS 980
Score = 43 (20.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEK- 154
T + TE +S++ S+ + D K G K+SE ++ +A +K
Sbjct: 899 TKGSSNTEF-KSTKEGFSIPVSADGFKFGISEPGNQEKESEKPLENDTGFQAQDISGQKN 957
Query: 155 GEDESSKQTES 165
G QT S
Sbjct: 958 GRGVIFGQTSS 968
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAA-S 149
K S A +L S K++ AN D K+ A K + D+ E + P VE
Sbjct: 994 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVIG 1053
Query: 150 SEPEK 154
E EK
Sbjct: 1054 EEGEK 1058
>UNIPROTKB|J3KNY6 [details] [associations]
symbol:RGPD4 "RanBP2-like and GRIP domain-containing
protein 4" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 EMBL:AC009963 EMBL:AC096655 HGNC:HGNC:32417
ProteinModelPortal:J3KNY6 Ensembl:ENST00000354986 OMA:MANKANS
Uniprot:J3KNY6
Length = 1766
Score = 155 (59.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 48/147 (32%), Positives = 75/147 (51%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENEKVVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1345 VEVSSGEENEKVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1403
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N ++ PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1404 KLCANHTITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1461
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1462 DEAKTAQEKDSLITPHVSRSSTPRESP 1488
Score = 130 (50.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 40/120 (33%), Positives = 60/120 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + GEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1046 EKVELVIGEEGEKVLYSQGVKLFRF-DAEVRQWKERGLGNLKI-LKNEVNGKPRMLMRRE 1103
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + G A + SA++ G + L A KF+ + EEF+
Sbjct: 1104 QVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFK 1161
Score = 43 (20.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+ EKE S + + +N G+ G ++STF F +
Sbjct: 921 DGFKFGISEPGNQ-EKE-SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 976
Query: 254 KDGS 257
K S
Sbjct: 977 KSTS 980
Score = 43 (20.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEK- 154
T + TE +S++ S+ + D K G K+SE ++ +A +K
Sbjct: 899 TKGSSNTEF-KSTKEGFSIPVSADGFKFGISEPGNQEKESEKPLENDTGFQAQDISGQKN 957
Query: 155 GEDESSKQTES 165
G QT S
Sbjct: 958 GRGVIFGQTSS 968
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAA-S 149
K S A +L S K++ AN D K+ A K + D+ E + P VE
Sbjct: 994 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVIG 1053
Query: 150 SEPEK 154
E EK
Sbjct: 1054 EEGEK 1058
>UNIPROTKB|F1NGF7 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 OMA:DCGTLQS EMBL:AADN02052163
EMBL:AADN02052164 EMBL:AADN02052165 EMBL:AADN02052166
IPI:IPI00682157 Ensembl:ENSGALT00000034345 Uniprot:F1NGF7
Length = 448
Score = 143 (55.4 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 242 FSTSTFAF-GSIPKDGSASNSTSAS--VFGQEVVVETGEENEKVVFSADSVLFEF--LDG 296
F T T + P + +A++ + + +V V TGEE E V + LF F L
Sbjct: 237 FPTETALLKNATPTEAAAAHISKPGEKILLDKVEVITGEEEEHNVLQINCKLFVFNKLSL 296
Query: 297 SWKERGKGELKVN-VSTNATG--RARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFA 353
+W E+G+G L++N S+N G ++RL+MR +G+ RLILN L+ M + + K +
Sbjct: 297 TWIEKGRGSLRLNDTSSNKCGMLQSRLIMRNQGSLRLILNTRLWGQMVIKRANSKSL--- 353
Query: 354 CINSATEGKSGLSTFALKFR 373
C + + + F ++ R
Sbjct: 354 CFTATDQEDHSVQVFLIQAR 373
>UNIPROTKB|E7ES93 [details] [associations]
symbol:RGPD1 "RANBP2-like and GRIP domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0046907 "intracellular
transport" evidence=IEA] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0046907 EMBL:AC111200 HGNC:HGNC:32414
ChiTaRS:RGPD1 IPI:IPI00941935 ProteinModelPortal:E7ES93 SMR:E7ES93
Ensembl:ENST00000456925 ArrayExpress:E7ES93 Bgee:E7ES93
Uniprot:E7ES93
Length = 644
Score = 149 (57.5 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 248 VEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 306
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 307 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 364
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 365 DEAKTAQEKDSLITPHVSRSSTPRESP 391
Score = 37 (18.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEK 281
TGF+ S + S+ K + N + SV G + + +E E+
Sbjct: 193 TGFNFSFKSALSLSKSPAKLNQSGTSV-GTDEESDVTQEEER 233
>UNIPROTKB|Q86VV4 [details] [associations]
symbol:RANBP3L "Ran-binding protein 3-like" species:9606
"Homo sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
EMBL:CH471119 EMBL:AC008807 HOVERGEN:HBG061383 HOGENOM:HOG000290662
EMBL:AK058151 EMBL:AK302947 EMBL:AC114277 EMBL:BC047660
IPI:IPI00328996 IPI:IPI00643706 IPI:IPI00922543
RefSeq:NP_001154901.1 RefSeq:NP_659437.3 UniGene:Hs.729817
HSSP:Q9H6Z4 ProteinModelPortal:Q86VV4 SMR:Q86VV4 PhosphoSite:Q86VV4
DMDM:74759446 PRIDE:Q86VV4 Ensembl:ENST00000296604
Ensembl:ENST00000502994 Ensembl:ENST00000515759 GeneID:202151
KEGG:hsa:202151 UCSC:uc003jkh.3 CTD:202151 GeneCards:GC05M036286
HGNC:HGNC:26353 HPA:HPA037471 neXtProt:NX_Q86VV4
PharmGKB:PA162400660 eggNOG:NOG294696 InParanoid:Q86VV4 OMA:DCGTLQS
OrthoDB:EOG4868CP PhylomeDB:Q86VV4 GenomeRNAi:202151 NextBio:90256
ArrayExpress:Q86VV4 Bgee:Q86VV4 CleanEx:HS_RANBP3L
Genevestigator:Q86VV4 Uniprot:Q86VV4
Length = 465
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/97 (38%), Positives = 56/97 (57%)
Query: 259 SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVN--VSTNA 314
S+ S +++ V TGEE E V + LF F SW ERG+G L++N ST+
Sbjct: 275 SSQPSRKCLLEKIDVITGEETEHNVLKINCKLFIFNKTTQSWIERGRGTLRLNDTASTDC 334
Query: 315 -TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 350
T ++RL+MR +G+ RLILN+ L+ MK+ + K +
Sbjct: 335 GTLQSRLIMRNQGSLRLILNSKLWAQMKIQRANHKNV 371
>UNIPROTKB|F1MXS1 [details] [associations]
symbol:RANBP2 "Putative peptidyl-prolyl cis-trans
isomerase" species:9913 "Bos taurus" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000156
InterPro:IPR001440 InterPro:IPR001876 InterPro:IPR002130
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515 Pfam:PF00638
Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS01358
PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199
PROSITE:PS50293 SMART:SM00160 SMART:SM00547 GO:GO:0006457
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270 GO:GO:0005622
Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00690000102083 IPI:IPI00837553
UniGene:Bt.4771 InterPro:IPR022011 Pfam:PF12185 CTD:5903 KO:K12172
OMA:GQWDCNV EMBL:DAAA02031034 RefSeq:NP_777017.1
Ensembl:ENSBTAT00000045527 GeneID:785768 KEGG:bta:785768
NextBio:20927487 Uniprot:F1MXS1
Length = 3035
Score = 152 (58.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2135 VEVSSGEENEQVVFSHRAKLYRYDKDAGQWKERGIGDIKI-LQNYENKQVRIVMRRDQVL 2193
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 385
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F+
Sbjct: 2194 KLCANHRITPDMTLQNMKGTERVWVWTAC--DFADGERKIEHLAVRFKLQDVADSFKKIF 2251
Query: 386 AAHK-DKTTAVLKTPENSPKAT 406
K + T L TP + AT
Sbjct: 2252 DEAKVAQETDFLITPHVARSAT 2273
Score = 137 (53.3 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1836 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1893
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1894 QVLKVCANHWITTTMHLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1951
Score = 46 (21.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKID-EPVAVEAASSEPE 153
K S A +L S +K+ VD DA + EK D + I EPV E
Sbjct: 1784 KGFSGAGEKLFSSQSSKL-VD-KADACADLEKDDDAYKTEDSDDIHFEPVVQMPEKVELV 1841
Query: 154 KGEDE 158
GE++
Sbjct: 1842 TGEED 1846
Score = 41 (19.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 121 GKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSK 161
G +A+ G + +++ + EPV E GE++ +
Sbjct: 1149 GHDADGGSAQGDEEDDGPHFEPVVPLPDKIEVRTGEEDEEE 1189
>DICTYBASE|DDB_G0287391 [details] [associations]
symbol:ranbp1 "Ran binding protein 1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0046907
"intracellular transport" evidence=IEA] [GO:0031291 "Ran protein
signal transduction" evidence=ISS] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000156 InterPro:IPR000697 Pfam:PF00638 PROSITE:PS50196
PROSITE:PS50229 SMART:SM00160 dictyBase:DDB_G0287391 GO:GO:0045335
Gene3D:2.30.29.30 InterPro:IPR011993 GenomeReviews:CM000154_GR
EMBL:AAFI02000100 GO:GO:0046907 GO:GO:0008536 eggNOG:COG5171
HSSP:P49792 RefSeq:XP_637284.1 ProteinModelPortal:Q54KD9
STRING:Q54KD9 PRIDE:Q54KD9 EnsemblProtists:DDB0237919
GeneID:8626115 KEGG:ddi:DDB_G0287391 OMA:ASECEDD
ProtClustDB:CLSZ2728873 GO:GO:0031291 Uniprot:Q54KD9
Length = 194
Score = 121 (47.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 50/170 (29%), Positives = 79/170 (46%)
Query: 244 TSTFAFGSIPKDGSAS---NSTSASVFGQEVV-VETGEENEKVVFSADSVLFEF-LDGS- 297
TS+FA + K+ +A N + ++VV V+T EENE +F + L+ F D S
Sbjct: 27 TSSFAPAAEIKEYAADVEPNVEYEATLKRDVVEVKTNEENEDTLFEIRAKLYRFDTDPSP 86
Query: 298 -WKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKL---TNMDKKGITFA 353
WKERG G ++ + + R R++MR ++ LN + P + L T DK + +
Sbjct: 87 QWKERGTGNVRF-LEDKDSKRIRVVMRRDKTLKVCLNHHISPALSLGEMTGSDKSWV-WK 144
Query: 354 CIN--SATEGKSGLST-FALKFRDASIVEEFQTAVAAHKDKTTAVLKTPE 400
C S E G+ FA++F F+T + K A+ K E
Sbjct: 145 CPKDFSDEEKPEGVEELFAIRFATPENAGLFKTEFQKCQAKNEAIEKKTE 194
Score = 41 (19.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 188 EKSEVDNGKTAGVDKPENEDEKETS 212
EK E + T V+K E E ++ETS
Sbjct: 5 EKKEEETTTTTTVEKTE-EKKEETS 28
>UNIPROTKB|P0DJD0 [details] [associations]
symbol:RGPD1 "RANBP2-like and GRIP domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 EMBL:AC111200
GO:GO:0000042 Gene3D:1.10.220.60 EMBL:CR749330
RefSeq:NP_001019628.3 UniGene:Hs.728970 ProteinModelPortal:P0DJD0
SMR:P0DJD0 PRIDE:P0DJD0 Ensembl:ENST00000409776
Ensembl:ENST00000559485 GeneID:400966 KEGG:hsa:400966 CTD:400966
GeneCards:GC02P087135 HGNC:HGNC:32414 MIM:612704 neXtProt:NX_P0DJD0
ChiTaRS:RGPD1 GenomeRNAi:400966 Bgee:P0DJD0 Uniprot:P0DJD0
Length = 1748
Score = 149 (57.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1329 VEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1387
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1388 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1445
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1446 DEAKTAQEKDSLITPHVSRSSTPRESP 1472
Score = 132 (51.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1030 EKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKPRMLMRRD 1087
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A +F+ + EEF+
Sbjct: 1088 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1145
Score = 43 (20.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K S + + +N G+ G ++STF F +
Sbjct: 905 DGFKFGISEPGNQEKK--SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 960
Query: 254 KDGS 257
K S
Sbjct: 961 KSTS 964
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAE----KGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN E + K + D+ E + P VE +
Sbjct: 978 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTG 1037
Query: 151 EPEKGE 156
E +GE
Sbjct: 1038 E--EGE 1041
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEK 281
TGF+ S + S+ K + N + SV G + + +E E+
Sbjct: 1274 TGFNFSFKSALSLSKSPAKLNQSGTSV-GTDEESDVTQEEER 1314
>UNIPROTKB|F8VYC4 [details] [associations]
symbol:RGPD1 "RANBP2-like and GRIP domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 EMBL:AC111200
GO:GO:0000042 Gene3D:1.10.220.60 HGNC:HGNC:32414 ChiTaRS:RGPD1
IPI:IPI00956752 ProteinModelPortal:F8VYC4 SMR:F8VYC4 PRIDE:F8VYC4
Ensembl:ENST00000398193 OMA:NIESICQ ArrayExpress:F8VYC4 Bgee:F8VYC4
Uniprot:F8VYC4
Length = 1756
Score = 149 (57.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1337 VEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1395
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1396 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1453
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1454 DEAKTAQEKDSLITPHVSRSSTPRESP 1480
Score = 132 (51.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1038 EKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKPRMLMRRD 1095
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A +F+ + EEF+
Sbjct: 1096 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1153
Score = 43 (20.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K S + + +N G+ G ++STF F +
Sbjct: 913 DGFKFGISEPGNQEKK--SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 968
Query: 254 KDGS 257
K S
Sbjct: 969 KSTS 972
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAE----KGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN E + K + D+ E + P VE +
Sbjct: 986 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTG 1045
Query: 151 EPEKGE 156
E +GE
Sbjct: 1046 E--EGE 1049
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEK 281
TGF+ S + S+ K + N + SV G + + +E E+
Sbjct: 1282 TGFNFSFKSALSLSKSPAKLNQSGTSV-GTDEESDVTQEEER 1322
>UNIPROTKB|F1MZD9 [details] [associations]
symbol:NUP50 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR000156
InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643
GO:GO:0046907 OMA:ECKGGDE GeneTree:ENSGT00440000035348
EMBL:DAAA02014927 IPI:IPI00716408 UniGene:Bt.37218
Ensembl:ENSBTAT00000023480 Uniprot:F1MZD9
Length = 465
Score = 107 (42.7 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 31/123 (25%), Positives = 56/123 (45%)
Query: 272 VVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY-RL 330
VV T + + +S LF + +KE+G G L + + N + +LL+RA N +
Sbjct: 344 VVVTEVKEDDAFYSKKCKLFYKKENEFKEKGVGTLHLKPTANQ--KTQLLVRADTNLGNI 401
Query: 331 ILNASLYPDMKLTNMDKKGITFACI-NSATEGKSGLS--TFALKFRDASIVEEFQTAVAA 387
+LN + P M T M K + C+ N + K+ + T ++ + + +E +
Sbjct: 402 LLNILIVPSMPCTRMGKNNVLIVCVPNPPVDEKNAATPVTMLIRVKTSEDADELHKILLE 461
Query: 388 HKD 390
KD
Sbjct: 462 KKD 464
Score = 58 (25.5 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EVL R I K RRN + F G +
Sbjct: 25 GTFSVASEEVLKNRAIKKAKRRNVGFESDGGGAFKGFK 62
Score = 53 (23.7 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 129 GEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKN-EP 169
G+D QS+ + P + + S+ E G +E E +N EP
Sbjct: 301 GKDTTQSKP-VSSPFSTKTLESQAESGSNECKGGDEEENDEP 341
Score = 43 (20.2 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGED------NKQSESKIDEPVAVEAASSEPEKGEDES 159
ES NK+SV+A + + K E NK ++ + AV S +P G +
Sbjct: 207 ESEANKISVEAQPPSLFGSTKLQPESPFLFHVNKMEDTSEKKVEAVSEKSKDPSLGATSA 266
Query: 160 S 160
S
Sbjct: 267 S 267
Score = 37 (18.1 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 123 EAEKGDGEDNKQSESKIDEPVAV 145
+AE G E E + DEP V
Sbjct: 322 QAESGSNECKGGDEEENDEPPKV 344
>UNIPROTKB|J9P0I5 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 GeneTree:ENSGT00530000063644 EMBL:AAEX03003172
Ensembl:ENSCAFT00000046391 Uniprot:J9P0I5
Length = 483
Score = 134 (52.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 38/114 (33%), Positives = 64/114 (56%)
Query: 243 STSTFAFGSIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWK 299
ST + S+ + +A S+ S +++ V TGEE E V + LF F SW
Sbjct: 283 STHSIQRISLIESAAAFSSKPSPKCLLEKIDVVTGEEAEHNVLKINCKLFIFNKTTQSWI 342
Query: 300 ERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 350
ERG+G L++N + ++ T ++RL+MR +G+ RLILN+ L+ M++ + K +
Sbjct: 343 ERGRGALRLNDTASSDCGTFQSRLIMRNQGSLRLILNSKLWTQMEIQRANHKNL 396
Score = 45 (20.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 130 EDNKQSE-SKIDEPVAVEAASSEPEKGEDESSKQTESKNE 168
ED +Q E S I +P+ V A + K E S S++E
Sbjct: 25 EDQRQQEKSVIAQPIFVFAKREQTFKRPAEDSTYEASEHE 64
>UNIPROTKB|J3QTV4 [details] [associations]
symbol:RGPD2 "RANBP2-like and GRIP domain-containing
protein 2" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 EMBL:AC093616 HGNC:HGNC:32415 ChiTaRS:RGPD2
EMBL:AC108479 EMBL:AC109354 ProteinModelPortal:J3QTV4
Ensembl:ENST00000420840 Uniprot:J3QTV4
Length = 1748
Score = 148 (57.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1329 VEVSSGEENEQVVFSHMAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1387
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1388 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1445
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1446 DEAKTAQEKDSLITPHVSRSSTPRESP 1472
Score = 132 (51.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1030 EKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKPRMLMRRD 1087
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A +F+ + EEF+
Sbjct: 1088 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1145
Score = 43 (20.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K S + + +N G+ G ++STF F +
Sbjct: 905 DGFKFGISEPGNQEKK--SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 960
Query: 254 KDGS 257
K S
Sbjct: 961 KSTS 964
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAE----KGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN E + K + D+ E + P VE +
Sbjct: 978 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTG 1037
Query: 151 EPEKGE 156
E +GE
Sbjct: 1038 E--EGE 1041
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEK 281
TGF+ S + S+ K + N + SV G + + +E E+
Sbjct: 1274 TGFNFSFKSALSLSKSPAKLNQSGTSV-GTDEESDVTQEEER 1314
>UNIPROTKB|P0DJD1 [details] [associations]
symbol:RGPD2 "RANBP2-like and GRIP domain-containing
protein 2" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 EMBL:AC093616 UniGene:Hs.728970 EMBL:AY354203
RefSeq:NP_001071638.2 UniGene:Hs.652430 ProteinModelPortal:P0DJD1
SMR:P0DJD1 PRIDE:P0DJD1 Ensembl:ENST00000327544
Ensembl:ENST00000398146 GeneID:729857 KEGG:hsa:729857 CTD:729857
GeneCards:GC02M088055 HGNC:HGNC:32415 MIM:612705 neXtProt:NX_P0DJD1
ChiTaRS:RGPD2 GenomeRNAi:729857 Bgee:P0DJD1 Uniprot:P0DJD1
Length = 1756
Score = 148 (57.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1337 VEVSSGEENEQVVFSHMAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1395
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1396 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1453
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1454 DEAKTAQEKDSLITPHVSRSSTPRESP 1480
Score = 132 (51.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1038 EKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKPRMLMRRD 1095
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A +F+ + EEF+
Sbjct: 1096 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1153
Score = 43 (20.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K S + + +N G+ G ++STF F +
Sbjct: 913 DGFKFGISEPGNQEKK--SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 968
Query: 254 KDGS 257
K S
Sbjct: 969 KSTS 972
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAE----KGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN E + K + D+ E + P VE +
Sbjct: 986 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTG 1045
Query: 151 EPEKGE 156
E +GE
Sbjct: 1046 E--EGE 1049
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEK 281
TGF+ S + S+ K + N + SV G + + +E E+
Sbjct: 1282 TGFNFSFKSALSLSKSPAKLNQSGTSV-GTDEESDVTQEEER 1322
>UNIPROTKB|A6NKT7 [details] [associations]
symbol:RGPD3 "RanBP2-like and GRIP domain-containing
protein 3" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 eggNOG:COG5171 HOGENOM:HOG000089994
OrthoDB:EOG4J3WG2 EMBL:AC097527 EMBL:AC114755 IPI:IPI00921207
RefSeq:NP_001137485.1 UniGene:Hs.726367 ProteinModelPortal:A6NKT7
SMR:A6NKT7 STRING:A6NKT7 PhosphoSite:A6NKT7 PaxDb:A6NKT7
PRIDE:A6NKT7 Ensembl:ENST00000409886 GeneID:653489 KEGG:hsa:653489
UCSC:uc010ywi.1 CTD:653489 GeneCards:GC02M107007 H-InvDB:HIX0030036
HGNC:HGNC:32416 MIM:612706 neXtProt:NX_A6NKT7 PharmGKB:PA142671072
HOVERGEN:HBG108404 InParanoid:A6NKT7 GenomeRNAi:653489
NextBio:123313 ArrayExpress:A6NKT7 Bgee:A6NKT7 CleanEx:HS_RGPD3
Genevestigator:A6NKT7 Uniprot:A6NKT7
Length = 1758
Score = 147 (56.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 47/147 (31%), Positives = 72/147 (48%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + + + D G WKERG G++K+ + R+LMR
Sbjct: 1345 VEVSSGEENEQVVFSHRAEFYRYDKDVGQWKERGIGDIKI-LQNYDNKHVRILMRRDQVL 1403
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1404 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1461
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1462 DEAKTAQEKDSLITPHVSRSSTPRESP 1488
Score = 133 (51.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LM+
Sbjct: 1046 EKVELVTGEEGEKVLYSQGVKLFRF-DAEVSQWKERGLGNLKI-LKNEVNGKVRMLMQRE 1103
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + G A + SA++ G + L A KF+ + EEF+
Sbjct: 1104 QVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFK 1161
Score = 44 (20.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 994 KGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1053
Query: 151 EPEKGE 156
E +GE
Sbjct: 1054 E--EGE 1057
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 14/64 (21%), Positives = 25/64 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K D + G+ G ++STF F +
Sbjct: 921 DGFKFGISEPGNQEKKSEKPLENDTGLQAQDISG---RKKGRGVI-FGQTSSTFTFADVA 976
Query: 254 KDGS 257
K S
Sbjct: 977 KSTS 980
>UNIPROTKB|J3KNE0 [details] [associations]
symbol:RGPD3 "RanBP2-like and GRIP domain-containing
protein 3" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 EMBL:AC097527 EMBL:AC114755 HGNC:HGNC:32416
ProteinModelPortal:J3KNE0 Ensembl:ENST00000304514 Uniprot:J3KNE0
Length = 1766
Score = 147 (56.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 47/147 (31%), Positives = 72/147 (48%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + + + D G WKERG G++K+ + R+LMR
Sbjct: 1345 VEVSSGEENEQVVFSHRAEFYRYDKDVGQWKERGIGDIKI-LQNYDNKHVRILMRRDQVL 1403
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1404 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1461
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1462 DEAKTAQEKDSLITPHVSRSSTPRESP 1488
Score = 133 (51.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LM+
Sbjct: 1046 EKVELVTGEEGEKVLYSQGVKLFRF-DAEVSQWKERGLGNLKI-LKNEVNGKVRMLMQRE 1103
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + G A + SA++ G + L A KF+ + EEF+
Sbjct: 1104 QVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFK 1161
Score = 44 (20.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 994 KGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1053
Query: 151 EPEKGE 156
E +GE
Sbjct: 1054 E--EGE 1057
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/64 (21%), Positives = 25/64 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K D + G+ G ++STF F +
Sbjct: 921 DGFKFGISEPGNQEKKSEKPLENDTGLQAQDISG---RKKGRGVI-FGQTSSTFTFADVA 976
Query: 254 KDGS 257
K S
Sbjct: 977 KSTS 980
>UNIPROTKB|J3KQ37 [details] [associations]
symbol:RGPD8 "RANBP2-like and GRIP domain-containing
protein 8" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 HGNC:HGNC:9849 EMBL:AC115115 EMBL:AC112246
ProteinModelPortal:J3KQ37 Ensembl:ENST00000409750 Uniprot:J3KQ37
Length = 1625
Score = 147 (56.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + ++ + D G WKERG G++K+ + + R++MR
Sbjct: 1204 VEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1262
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1263 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1320
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1321 DEAKTAQEKDSLITPHVSRSSTPRESP 1347
Score = 136 (52.9 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 41/120 (34%), Positives = 61/120 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 905 EKVELVTGEEGEKVLYSQGVKLFRF-DAEVRQWKERGLGNLKI-LKNEVNGKLRMLMRRE 962
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + G A + SA++ G + L A KF+ + EEF+
Sbjct: 963 QVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFK 1020
Score = 43 (20.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 853 KGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 912
Query: 151 EPEKGE 156
E +GE
Sbjct: 913 E--EGE 916
>MGI|MGI:2444654 [details] [associations]
symbol:Ranbp3l "RAN binding protein 3-like" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0046907 "intracellular
transport" evidence=IEA] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 MGI:MGI:2444654 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907 HOVERGEN:HBG061383
GeneTree:ENSGT00530000063644 HOGENOM:HOG000290662 HSSP:Q9H6Z4
CTD:202151 eggNOG:NOG294696 OrthoDB:EOG4868CP EMBL:AK132406
EMBL:BC058706 IPI:IPI00381372 IPI:IPI00877309 RefSeq:NP_932141.1
UniGene:Mm.321371 UniGene:Mm.418007 ProteinModelPortal:Q6PDH4
SMR:Q6PDH4 PhosphoSite:Q6PDH4 PRIDE:Q6PDH4
Ensembl:ENSMUST00000166524 GeneID:223332 KEGG:mmu:223332
UCSC:uc007vfb.1 NextBio:376693 Bgee:Q6PDH4 CleanEx:MM_RANBP3L
Genevestigator:Q6PDH4 Uniprot:Q6PDH4
Length = 491
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/117 (30%), Positives = 62/117 (52%)
Query: 251 SIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEFLDG--SWKERGKGELK 307
S+ + +A S+ S +++ V TGEE E V + +F F SW ERG+G L+
Sbjct: 291 SLVESAAAFSSKPSQKCLLEKIDVITGEETEHNVLKINCKIFVFNKATESWSERGQGILR 350
Query: 308 VNVSTN---ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 361
+N + T ++RL+MR +G+ RL+LN+ L+ MK+ +K + + +G
Sbjct: 351 LNDTAGRECGTLQSRLIMRNQGSLRLVLNSRLWAQMKIQRASQKNLRITATDLEDDG 407
>UNIPROTKB|Q99666 [details] [associations]
symbol:RGPD5 "RANBP2-like and GRIP domain-containing
protein 5/6" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000156 InterPro:IPR000237
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638 Pfam:PF01465
PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293 PROSITE:PS50913
SMART:SM00160 SMART:SM00755 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 UniGene:Hs.469630 EMBL:AC108938 EMBL:AC013271
eggNOG:COG5171 HOGENOM:HOG000089994 OrthoDB:EOG4J3WG2
HOVERGEN:HBG108404 EMBL:U64675 EMBL:AL136868 EMBL:AC123886
EMBL:AC109815 EMBL:AB209082 IPI:IPI00100787 IPI:IPI00293568
RefSeq:NP_001032955.1 RefSeq:NP_001116835.1 RefSeq:NP_005045.2
RefSeq:NP_115636.1 UniGene:Hs.645445 ProteinModelPortal:Q99666
SMR:Q99666 IntAct:Q99666 STRING:Q99666 PhosphoSite:Q99666
PaxDb:Q99666 PRIDE:Q99666 DNASU:729540 DNASU:84220
Ensembl:ENST00000016946 Ensembl:ENST00000272454
Ensembl:ENST00000329516 Ensembl:ENST00000330331
Ensembl:ENST00000393283 GeneID:729540 GeneID:84220 KEGG:hsa:729540
KEGG:hsa:84220 UCSC:uc002tfc.3 UCSC:uc002tfe.1 CTD:729540 CTD:84220
GeneCards:GC02M111271 GeneCards:GC02P110550 HGNC:HGNC:32418
HGNC:HGNC:32419 MIM:612708 MIM:612709 MIM:612710 neXtProt:NX_Q99666
PharmGKB:PA142671074 InParanoid:Q53T03 PhylomeDB:Q99666
ChiTaRS:RGPD5 NextBio:130592 ArrayExpress:Q99666 Bgee:Q99666
CleanEx:HS_RGPD5 CleanEx:HS_RGPD8 Genevestigator:Q99666
GermOnline:ENSG00000015568 GermOnline:ENSG00000183054
Uniprot:Q99666
Length = 1765
Score = 147 (56.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + ++ + D G WKERG G++K+ + + R++MR
Sbjct: 1344 VEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1402
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1403 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1460
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1461 DEAKTAQEKDSLITPHVSRSSTPRESP 1487
Score = 136 (52.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 41/120 (34%), Positives = 61/120 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1045 EKVELVTGEEGEKVLYSQGVKLFRF-DAEVRQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1102
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + G A + SA++ G + L A KF+ + EEF+
Sbjct: 1103 QVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFK 1160
Score = 43 (20.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 993 KGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1052
Query: 151 EPEKGE 156
E +GE
Sbjct: 1053 E--EGE 1056
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/64 (21%), Positives = 25/64 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K D + G+ G ++STF F +
Sbjct: 920 DGFKFGISEPGNQEKKREKPLENDTGFQAQDISG---RKKGRGVI-FGQTSSTFTFADVA 975
Query: 254 KDGS 257
K S
Sbjct: 976 KSTS 979
>UNIPROTKB|O14715 [details] [associations]
symbol:RGPD8 "RANBP2-like and GRIP domain-containing
protein 8" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] [GO:0008536 "Ran GTPase binding"
evidence=NAS] [GO:0005643 "nuclear pore" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005643 Gene3D:1.25.40.10 GO:GO:0008536
GO:GO:0000042 Gene3D:1.10.220.60 UniGene:Hs.469630
HOGENOM:HOG000089994 OrthoDB:EOG4J3WG2 HOVERGEN:HBG108404
CleanEx:HS_RGPD8 EMBL:AF012086 EMBL:CR936614 IPI:IPI00956184
RefSeq:NP_001157935.1 UniGene:Hs.535589 ProteinModelPortal:O14715
SMR:O14715 IntAct:O14715 STRING:O14715 PhosphoSite:O14715
PRIDE:O14715 Ensembl:ENST00000302558 GeneID:727851 KEGG:hsa:727851
UCSC:uc002tht.1 CTD:727851 GeneCards:GC02M113125 H-InvDB:HIX0029791
HGNC:HGNC:9849 MIM:602752 neXtProt:NX_O14715 PharmGKB:PA34210
InParanoid:O14715 PhylomeDB:O14715 GenomeRNAi:727851 NextBio:125308
ArrayExpress:O14715 Bgee:O14715 Genevestigator:O14715
GermOnline:ENSG00000169629 Uniprot:O14715
Length = 1765
Score = 147 (56.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + ++ + D G WKERG G++K+ + + R++MR
Sbjct: 1344 VEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1402
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1403 KLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1460
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1461 DEAKTAQEKDSLITPHVSRSSTPRESP 1487
Score = 136 (52.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 41/120 (34%), Positives = 61/120 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1045 EKVELVTGEEGEKVLYSQGVKLFRF-DAEVRQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1102
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + G A + SA++ G + L A KF+ + EEF+
Sbjct: 1103 QVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFK 1160
Score = 43 (20.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 993 KGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1052
Query: 151 EPEKGE 156
E +GE
Sbjct: 1053 E--EGE 1056
>UNIPROTKB|E9PGT0 [details] [associations]
symbol:RANBP2 "Putative peptidyl-prolyl cis-trans
isomerase" species:9606 "Homo sapiens" [GO:0046907 "intracellular
transport" evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] InterPro:IPR000156 InterPro:IPR001440
InterPro:IPR002130 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515
Pfam:PF00638 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50005
PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50293 SMART:SM00160
GO:GO:0006457 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 EMBL:AC010095 InterPro:IPR022011 Pfam:PF12185
HGNC:HGNC:9848 ChiTaRS:RANBP2 IPI:IPI00915960
ProteinModelPortal:E9PGT0 SMR:E9PGT0 Ensembl:ENST00000409491
ArrayExpress:E9PGT0 Bgee:E9PGT0 Uniprot:E9PGT0
Length = 2248
Score = 147 (56.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1344 VEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1402
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1403 KLCANHRITPDMTLQNMKGTERVWLWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 1460
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 1461 DEAKTAQEKDSLITPHVSRSSTPRESP 1487
Score = 138 (53.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1045 EKVELVTGEEDEKVLYSQRVKLFRF-DAEVSQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1102
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1103 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1160
Score = 114 (45.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 32/117 (27%), Positives = 64/117 (54%)
Query: 270 EVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGN 327
EV V++GEE+E+++F + L+ + D S WKERG G++K+ T R+LMR
Sbjct: 1944 EVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHT-MKNYYRILMRRDQV 2002
Query: 328 YRLILNASLYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 382
+++ N + M+L N+ + + + A +G++ + A++F+ + + F+
Sbjct: 2003 FKVCANHVITKTMELKPLNVSNNALVWTASDYA-DGEAKVEQLAVRFKTKEVADCFK 2058
Score = 61 (26.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 46/183 (25%), Positives = 75/183 (40%)
Query: 123 EAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXX 182
+ + G+GED + K+ E A S+ E E + T+S
Sbjct: 1768 DEDNGNGEDFQSELQKVQE-----AQKSQTE----EITSTTDSVYTGGTEVMVPSFCKSE 1818
Query: 183 XENGAEKS-EVDNGKTAGVDKPEN-EDEKETSHETTDXXXXXXXXXX--XXTQNAFTGLA 238
+ KS + + +DKP + KE ++T T +F LA
Sbjct: 1819 EPDSITKSISSPSVSSETMDKPVDLSTRKEIDTDSTSQGESKIVSFGFGSSTGLSFADLA 1878
Query: 239 GTGFSTSTFAFGSIPKDGSASNSTSASVFG-QEVVVET----GEE----NEKVVFSADSV 289
+ ++ FAFGS K+ +N T A+VFG Q V ++ GE+ +E+VV + D +
Sbjct: 1879 SS--NSGDFAFGSKDKNFQWAN-TGAAVFGTQSVGTQSAGKVGEDEDGSDEEVVHNED-I 1934
Query: 290 LFE 292
FE
Sbjct: 1935 HFE 1937
Score = 45 (20.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 993 KGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1052
Query: 151 EPEK 154
E ++
Sbjct: 1053 EEDE 1056
>UNIPROTKB|F1PS89 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 GeneTree:ENSGT00530000063644 EMBL:AAEX03003172
Ensembl:ENSCAFT00000029705 Uniprot:F1PS89
Length = 436
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 38/114 (33%), Positives = 64/114 (56%)
Query: 243 STSTFAFGSIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWK 299
ST + S+ + +A S+ S +++ V TGEE E V + LF F SW
Sbjct: 228 STHSIQRISLIESAAAFSSKPSPKCLLEKIDVVTGEEAEHNVLKINCKLFIFNKTTQSWI 287
Query: 300 ERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 350
ERG+G L++N + ++ T ++RL+MR +G+ RLILN+ L+ M++ + K +
Sbjct: 288 ERGRGALRLNDTASSDCGTFQSRLIMRNQGSLRLILNSKLWTQMEIQRANHKNL 341
>UNIPROTKB|F1PS90 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 GeneTree:ENSGT00530000063644 EMBL:AAEX03003172
Ensembl:ENSCAFT00000029704 Uniprot:F1PS90
Length = 491
Score = 134 (52.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 38/114 (33%), Positives = 64/114 (56%)
Query: 243 STSTFAFGSIPKDGSA-SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEF--LDGSWK 299
ST + S+ + +A S+ S +++ V TGEE E V + LF F SW
Sbjct: 283 STHSIQRISLIESAAAFSSKPSPKCLLEKIDVVTGEEAEHNVLKINCKLFIFNKTTQSWI 342
Query: 300 ERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 350
ERG+G L++N + ++ T ++RL+MR +G+ RLILN+ L+ M++ + K +
Sbjct: 343 ERGRGALRLNDTASSDCGTFQSRLIMRNQGSLRLILNSKLWTQMEIQRANHKNL 396
>UNIPROTKB|F1SNB4 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 EMBL:CU856110
Ensembl:ENSSSCT00000018334 Uniprot:F1SNB4
Length = 432
Score = 133 (51.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 245 STFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEKVVFSADSVLFEFLDG--SWKERG 302
ST I + S+ S +++ V TGEE E V + LF F SW ERG
Sbjct: 227 STKDISLIESAAAFSSKPSPKYLLEKIDVITGEEAEHNVLKINCKLFIFNKPAQSWIERG 286
Query: 303 KGELKVNVSTN---ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 350
+G L++N + AT ++RL+MR +G+ RLILN+ L+ M++ K +
Sbjct: 287 RGALRLNDTAGSDCATFQSRLIMRNQGSLRLILNSKLWAQMEIQRASHKNL 337
>UNIPROTKB|F1SNB5 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 EMBL:CU856110
Ensembl:ENSSSCT00000018333 Uniprot:F1SNB5
Length = 457
Score = 133 (51.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 245 STFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEKVVFSADSVLFEFLDG--SWKERG 302
ST I + S+ S +++ V TGEE E V + LF F SW ERG
Sbjct: 252 STKDISLIESAAAFSSKPSPKYLLEKIDVITGEEAEHNVLKINCKLFIFNKPAQSWIERG 311
Query: 303 KGELKVNVSTN---ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 350
+G L++N + AT ++RL+MR +G+ RLILN+ L+ M++ K +
Sbjct: 312 RGALRLNDTAGSDCATFQSRLIMRNQGSLRLILNSKLWAQMEIQRASHKNL 362
>UNIPROTKB|F1SNB3 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 OMA:DCGTLQS EMBL:CU856110
Ensembl:ENSSSCT00000018335 Uniprot:F1SNB3
Length = 458
Score = 133 (51.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 245 STFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEKVVFSADSVLFEFLDG--SWKERG 302
ST I + S+ S +++ V TGEE E V + LF F SW ERG
Sbjct: 253 STKDISLIESAAAFSSKPSPKYLLEKIDVITGEEAEHNVLKINCKLFIFNKPAQSWIERG 312
Query: 303 KGELKVNVSTN---ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 350
+G L++N + AT ++RL+MR +G+ RLILN+ L+ M++ K +
Sbjct: 313 RGALRLNDTAGSDCATFQSRLIMRNQGSLRLILNSKLWAQMEIQRASHKNL 363
>UNIPROTKB|E1BCV6 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 CTD:202151 EMBL:DAAA02050642
EMBL:DAAA02050643 EMBL:DAAA02050644 IPI:IPI00693079
RefSeq:XP_002696422.1 RefSeq:XP_002702562.1 UniGene:Bt.60654
Ensembl:ENSBTAT00000011090 GeneID:100296398 KEGG:bta:100296398
Uniprot:E1BCV6
Length = 463
Score = 133 (51.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 31/87 (35%), Positives = 52/87 (59%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVSTNA---TGRARLLMR 323
+++ + TGEE E V + LF F SW ERG+G L++N + + T ++RL+MR
Sbjct: 282 EKIDIITGEEAEHNVLEINCKLFRFNKTTQSWTERGRGALRLNDTARSDCGTFQSRLIMR 341
Query: 324 ARGNYRLILNASLYPDMKLTNMDKKGI 350
+G+ RLILN+ L+ M++ + K +
Sbjct: 342 NQGSLRLILNSKLWAQMEIQRANHKNL 368
>UNIPROTKB|P49792 [details] [associations]
symbol:RANBP2 "E3 SUMO-protein ligase RanBP2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0016925 "protein sumoylation" evidence=IEA;IDA]
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0044615 "nuclear pore nuclear basket"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0042405 "nuclear inclusion body" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=TAS] [GO:0008536 "Ran GTPase
binding" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR000156 InterPro:IPR001440 InterPro:IPR001876
InterPro:IPR002130 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515
Pfam:PF00638 Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170
PROSITE:PS01358 PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196
PROSITE:PS50199 PROSITE:PS50293 SMART:SM00160 SMART:SM00547
UniPathway:UPA00886 GO:GO:0005829
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0006457
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0044281 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 GO:GO:0016874 GO:GO:0005975
GO:GO:0008270 GO:GO:0005643 GO:GO:0019221 GO:GO:0015758
GO:GO:0010827 GO:GO:0055085 GO:GO:0006606 Gene3D:1.25.40.10
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0051028
GO:GO:0000236 GO:GO:0016925 GO:GO:0008536 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 Orphanet:263524
Pathway_Interaction_DB:ranbp2pathway EMBL:AC010095 eggNOG:COG5171
PDB:1Z5S PDB:3UIN PDB:3UIO PDB:3UIP PDBsum:1Z5S PDBsum:3UIN
PDBsum:3UIO PDBsum:3UIP PDB:1RRP PDBsum:1RRP HOGENOM:HOG000089994
OrthoDB:EOG4J3WG2 InterPro:IPR022011 Pfam:PF12185 EMBL:L41840
EMBL:D42063 EMBL:AB209483 EMBL:U19248 IPI:IPI00221325 PIR:S58884
RefSeq:NP_006258.3 UniGene:Hs.199561 UniGene:Hs.715056 PDB:1XKE
PDB:4GA0 PDBsum:1XKE PDBsum:4GA0 ProteinModelPortal:P49792
SMR:P49792 DIP:DIP-37654N IntAct:P49792 MINT:MINT-191403
STRING:P49792 PhosphoSite:P49792 DMDM:83305554 OGP:P49792
PaxDb:P49792 PeptideAtlas:P49792 PRIDE:P49792
Ensembl:ENST00000283195 GeneID:5903 KEGG:hsa:5903 UCSC:uc002tem.4
CTD:5903 GeneCards:GC02P109335 H-InvDB:HIX0002358 HGNC:HGNC:9848
MIM:601181 MIM:608033 neXtProt:NX_P49792 Orphanet:88619
PharmGKB:PA34209 HOVERGEN:HBG092361 InParanoid:P49792 KO:K12172
OMA:SATKCIA PhylomeDB:P49792 ChiTaRS:RANBP2
EvolutionaryTrace:P49792 GenomeRNAi:5903 NextBio:22964
ArrayExpress:P49792 Bgee:P49792 CleanEx:HS_RANBP2
Genevestigator:P49792 GermOnline:ENSG00000153201 Uniprot:P49792
Length = 3224
Score = 147 (56.8 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2320 VEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 2378
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 2379 KLCANHRITPDMTLQNMKGTERVWLWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 2436
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ A KD T V + TP SP
Sbjct: 2437 DEAKTAQEKDSLITPHVSRSSTPRESP 2463
Score = 138 (53.6 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 2021 EKVELVTGEEDEKVLYSQRVKLFRF-DAEVSQWKERGLGNLKI-LKNEVNGKLRMLMRRE 2078
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 2079 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 2136
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 270 EVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGN 327
++ V+TGEE+E+ F + LF F ++ WKERG G +K+ + +G+ RLLMR
Sbjct: 1181 KIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKI-LRHKTSGKIRLLMRREQV 1239
Query: 328 YRLILNASLYPDMKLT 343
++ N + PDMKLT
Sbjct: 1240 LKICANHYISPDMKLT 1255
Score = 114 (45.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 32/117 (27%), Positives = 64/117 (54%)
Query: 270 EVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGN 327
EV V++GEE+E+++F + L+ + D S WKERG G++K+ T R+LMR
Sbjct: 2920 EVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHT-MKNYYRILMRRDQV 2978
Query: 328 YRLILNASLYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 382
+++ N + M+L N+ + + + A +G++ + A++F+ + + F+
Sbjct: 2979 FKVCANHVITKTMELKPLNVSNNALVWTASDYA-DGEAKVEQLAVRFKTKEVADCFK 3034
Score = 61 (26.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 46/183 (25%), Positives = 75/183 (40%)
Query: 123 EAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXX 182
+ + G+GED + K+ E A S+ E E + T+S
Sbjct: 2744 DEDNGNGEDFQSELQKVQE-----AQKSQTE----EITSTTDSVYTGGTEVMVPSFCKSE 2794
Query: 183 XENGAEKS-EVDNGKTAGVDKPEN-EDEKETSHETTDXXXXXXXXXX--XXTQNAFTGLA 238
+ KS + + +DKP + KE ++T T +F LA
Sbjct: 2795 EPDSITKSISSPSVSSETMDKPVDLSTRKEIDTDSTSQGESKIVSFGFGSSTGLSFADLA 2854
Query: 239 GTGFSTSTFAFGSIPKDGSASNSTSASVFG-QEVVVET----GEE----NEKVVFSADSV 289
+ ++ FAFGS K+ +N T A+VFG Q V ++ GE+ +E+VV + D +
Sbjct: 2855 SS--NSGDFAFGSKDKNFQWAN-TGAAVFGTQSVGTQSAGKVGEDEDGSDEEVVHNED-I 2910
Query: 290 LFE 292
FE
Sbjct: 2911 HFE 2913
Score = 45 (20.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 1969 KGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 2028
Query: 151 EPEK 154
E ++
Sbjct: 2029 EEDE 2032
>UNIPROTKB|G3MX58 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 OMA:DCGTLQS EMBL:DAAA02050642
EMBL:DAAA02050643 EMBL:DAAA02050644 Ensembl:ENSBTAT00000065667
Uniprot:G3MX58
Length = 484
Score = 133 (51.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 31/87 (35%), Positives = 52/87 (59%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVSTNA---TGRARLLMR 323
+++ + TGEE E V + LF F SW ERG+G L++N + + T ++RL+MR
Sbjct: 303 EKIDIITGEEAEHNVLEINCKLFRFNKTTQSWTERGRGALRLNDTARSDCGTFQSRLIMR 362
Query: 324 ARGNYRLILNASLYPDMKLTNMDKKGI 350
+G+ RLILN+ L+ M++ + K +
Sbjct: 363 NQGSLRLILNSKLWAQMEIQRANHKNL 389
>ASPGD|ASPL0000030982 [details] [associations]
symbol:nup2 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IDA] [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 EMBL:BN001305
eggNOG:NOG12793 GO:GO:0046907 EMBL:AACD01000094 OrthoDB:EOG4ZSDCT
RefSeq:XP_663089.1 ProteinModelPortal:Q5B1U5 STRING:Q5B1U5
EnsemblFungi:CADANIAT00003603 GeneID:2871776 KEGG:ani:AN5485.2
HOGENOM:HOG000216662 OMA:TWKPNTP Uniprot:Q5B1U5
Length = 1383
Score = 119 (46.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVE-----TGEENEKVVFSADSVLFEFL 294
T S S + D A +S E V+ GEE+E +V + + +
Sbjct: 1235 TSESQSRATTPGVTSDTGAEDSADGDAQKPEPQVDLARSGAGEEDEDIVIETRARALKMV 1294
Query: 295 DGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFAC 354
DGSW +G G L++ + T R+R+L+RA + ++LNA L ++K T ++ I F
Sbjct: 1295 DGSWASQGVGFLRI-LKNRTTSRSRVLVRADPSGNVVLNARLMKEIKYT-VNGNNIQFL- 1351
Query: 355 INSATEGKSGLSTFALKFRDA 375
+ A EG + LK +A
Sbjct: 1352 VPKA-EGAPEMWALRLKAGEA 1371
Score = 56 (24.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 42 KKATDEVLATRRIVKVRRNQTASTPSSN 69
++AT LA R+I VRR A TPS +
Sbjct: 10 QRATAAQLAARKIKDVRRRPRAGTPSGS 37
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 38/214 (17%), Positives = 68/214 (31%)
Query: 63 ASTPSSNPFAGIRLXXXXXXXXXXXXXXXXXXKTVSPAAT--ELLESSENKVSVDANNDA 120
+STP+++ F+ L T PA T L + + + ++ A
Sbjct: 320 SSTPAASSFSSAPLTTGNTSSSLFSTS------TPKPATTGQNLFQPTTSLFGASTSSTA 373
Query: 121 GKEAEKGDGEDNKQSESKIDEPV----AVEAASSEPEKGEDESSKQTESKNEPXXXXXXX 176
K +E+ E K ++S +P + +S + Q+ ++P
Sbjct: 374 QKPSEEKAQEGTKANQSTSTQPSFSFSSTTTGASLFSSNASGAPAQSTGPSQPVSTGSLF 433
Query: 177 XXXXXXXENGAEKSEVDNG-KTAGVDKPENEDEKETSHETTDXXXXXX-----XXXXXXT 230
E K N + V KP N + + ++ +
Sbjct: 434 APEPASTEQEKPKPAEGNPFSSLFVPKPANAESPKPEQKSLPSSSPFAPKPVSSEGAKTS 493
Query: 231 QNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSA 264
+ T + FS T S P S + STSA
Sbjct: 494 EQPKTSTPASPFSAPTLGAASSPVSQSTAFSTSA 527
Score = 51 (23.0 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 62 TASTPSSNPFAGI 74
TASTP SNPFA +
Sbjct: 114 TASTPVSNPFASM 126
Score = 48 (22.0 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 21/79 (26%), Positives = 29/79 (36%)
Query: 120 AGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXX 179
A K AEK + E K E DE + A E + E + K+ E + +
Sbjct: 856 AEKNAEK-EKEKRKAEEFDSDED---DEAEWERKDAEKQRKKREELEAQQNRRAKFVPGQ 911
Query: 180 XXXXENGAEKSEVDNGKTA 198
EN A + E N A
Sbjct: 912 GFSFENSATEEEKSNTSAA 930
Score = 45 (20.9 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 16/108 (14%), Positives = 38/108 (35%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESK 166
S EN + + ++ + D + N S S + +++ E GE+E +++
Sbjct: 914 SFENSATEEEKSNTSAASSVLDSKPNSFSSSS---NIFGHLSATPSESGENEHDAADDTE 970
Query: 167 NEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHE 214
+ S D+ + P + DE +++ +
Sbjct: 971 EDSVTGDDAVRESSSAPTEDLHASRADSKINSTASAPRSSDEDDSTKD 1018
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGE 130
S++ K + D ++DA A++ DG+
Sbjct: 693 SNKRKATGDDDSDASSPAKRVDGD 716
>TAIR|locus:2178798 [details] [associations]
symbol:RANBP1 "RAN binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0000060 "protein import into nucleus,
translocation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643 GO:GO:0000060
GO:GO:0051028 EMBL:AB020755 eggNOG:COG5171 HOGENOM:HOG000176323
KO:K15306 EMBL:U62742 IPI:IPI00526983 RefSeq:NP_200667.2
UniGene:At.7865 ProteinModelPortal:P92985 SMR:P92985 STRING:P92985
PaxDb:P92985 PRIDE:P92985 EnsemblPlants:AT5G58590.1 GeneID:835973
KEGG:ath:AT5G58590 GeneFarm:5097 TAIR:At5g58590 InParanoid:P92985
OMA:SCLWHAT PhylomeDB:P92985 ProtClustDB:CLSN2918414
Genevestigator:P92985 GermOnline:AT5G58590 Uniprot:P92985
Length = 219
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARG 326
+EV V TGEE+E V S ++ F +G+ WKERG G +K+ + TG+ RL+MR
Sbjct: 34 EEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKL-LKHKETGKVRLVMRQSK 92
Query: 327 NYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSG-LSTFALKFRDASIVEEFQTAV 385
++ N + M + + G +C+ AT+ G L R ASI E +T +
Sbjct: 93 TLKICANHLISSGMSV--QEHSGNEKSCLWHATDFSDGELKDELFCIRFASI-ENCKTFM 149
Query: 386 AAHKDKTTAVLKTPENSPKAT 406
+K T + ++ + ++T
Sbjct: 150 ----EKFTEIAESQQVGKEST 166
>RGD|1560047 [details] [associations]
symbol:Ranbp2 "RAN binding protein 2" species:10116 "Rattus
norvegicus" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=ISO] [GO:0006457 "protein folding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016925 "protein
sumoylation" evidence=ISO] [GO:0031965 "nuclear membrane"
evidence=ISO] [GO:0042405 "nuclear inclusion body" evidence=ISO]
[GO:0044615 "nuclear pore nuclear basket" evidence=ISO] [GO:0046907
"intracellular transport" evidence=IEA] InterPro:IPR000156
InterPro:IPR001440 InterPro:IPR001876 InterPro:IPR002130
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515 Pfam:PF00638
Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS01358
PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199
PROSITE:PS50293 SMART:SM00160 SMART:SM00547 RGD:1560047
GO:GO:0006457 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00690000102083
OrthoDB:EOG4J3WG2 InterPro:IPR022011 Pfam:PF12185 IPI:IPI00371944
ProteinModelPortal:D4A054 IntAct:D4A054 Ensembl:ENSRNOT00000001044
UCSC:RGD:1560047 Uniprot:D4A054
Length = 3055
Score = 143 (55.4 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 46/147 (31%), Positives = 73/147 (49%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
+ V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2162 IEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 2220
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L M ++ + AC +G+ + A++F+ + + F
Sbjct: 2221 KLCANHRITPDMTLQTMKGTERVWVWTAC--DFADGERKIEHLAVRFKLQDVADSFKKIF 2278
Query: 382 -QTAVAAHKDK--TTAV--LKTPENSP 403
+ A KD T V L TP SP
Sbjct: 2279 DEAKTAQEKDCLITPHVSHLSTPRESP 2305
Score = 138 (53.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1863 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1920
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1921 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1978
Score = 131 (51.2 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 270 EVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRARG 326
++ V+TGEE+E+ F + LF F DG WKERG G +K+ + +G+ RLLMR
Sbjct: 1175 KIEVKTGEEDEEEFFCNRAKLFRF-DGESKEWKERGIGNVKI-LRHKTSGKIRLLMRREQ 1232
Query: 327 NYRLILNASLYPDMKLT 343
++ N + PDMKLT
Sbjct: 1233 VLKICANHYISPDMKLT 1249
Score = 118 (46.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 34/120 (28%), Positives = 65/120 (54%)
Query: 270 EVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGN 327
EV V++GEE+E+V+F + L+ + D S WKERG G++K+ + + R+LMR
Sbjct: 2751 EVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKI-LWHSVKNYYRILMRRDQV 2809
Query: 328 YRLILNASLYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 385
+++ N + M+L N + + + A +G++ + A++F+ I E F+ +
Sbjct: 2810 FKVCANHVITKAMELKPLNFSNNALVWTASDYA-DGEAKIEQLAVRFKTKEITECFKKKI 2868
Score = 73 (30.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 43/179 (24%), Positives = 76/179 (42%)
Query: 123 EAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXX 182
+ + G+GED + K+ E ++ G +++ +TE+ N P
Sbjct: 2581 DEDNGNGEDFQSELRKVQEAQKSQSEKVTNTVGIEQTG-ETEATN-PDGSKSE------- 2631
Query: 183 XENGAEKSEVDNGKTAG-VDKPEN-EDEKETSHE--TTDXXXXXXXXXXXXTQNAFTGLA 238
E ++ + G +DKP + +KET E + T +F LA
Sbjct: 2632 -EPDSDTKHSSSSPVPGTMDKPVDLSTKKETDMEFPSQGESKTVLFGFGSGTGLSFADLA 2690
Query: 239 GTGFSTSTFAFGSIPKDGSAS-NSTSASVFGQEVVVETGEE----NEKVVFSADSVLFE 292
+ ++ FAFG PKD + +T A+VFG + + G++ +E VV + D + FE
Sbjct: 2691 SS--NSGDFAFG--PKDKNFQWANTGAAVFGTQSTSKDGDDEDGSDEDVVHNED-IHFE 2744
Score = 42 (19.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 238 AGTGFSTSTFAFGS 251
A TG S +TF+FGS
Sbjct: 1088 AQTGGSRNTFSFGS 1101
>WB|WBGene00003795 [details] [associations]
symbol:npp-9 species:6239 "Caenorhabditis elegans"
[GO:0046907 "intracellular transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0040039 "inductive cell migration"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0005643
"nuclear pore" evidence=IDA] InterPro:IPR000156 InterPro:IPR001876
Pfam:PF00638 PROSITE:PS50196 PROSITE:PS50199 SMART:SM00160
SMART:SM00547 GO:GO:0009792 GO:GO:0007052 GO:GO:0016246
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270 GO:GO:0005643
GO:GO:0040035 GO:GO:0040039 GO:GO:0046907 GO:GO:0040002
GO:GO:0006997 EMBL:Z34801 HSSP:P49792 GeneTree:ENSGT00690000102083
KO:K12172 GeneID:175443 KEGG:cel:CELE_F59A2.1 UCSC:F59A2.1b.1
CTD:175443 HOGENOM:HOG000125413 NextBio:888184 RefSeq:NP_871701.1
ProteinModelPortal:Q86G90 SMR:Q86G90 IntAct:Q86G90
MINT:MINT-1066564 STRING:Q86G90 PRIDE:Q86G90
EnsemblMetazoa:F59A2.1b.1 EnsemblMetazoa:F59A2.1b.2
EnsemblMetazoa:F59A2.1b.3 WormBase:F59A2.1b InParanoid:Q86G90
OMA:CEDFSED ArrayExpress:Q86G90 Uniprot:Q86G90
Length = 884
Score = 134 (52.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 40/127 (31%), Positives = 69/127 (54%)
Query: 271 VVVETGEENEKVVFSADSVLFEFLDG--SWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V+TGEE+E+V+FSA L+++ KERG G++K+ S + + R++MR +
Sbjct: 760 VEVKTGEEDEEVMFSARCKLYKYYSDLKENKERGLGDIKLLKSND--NKYRIVMRREQVH 817
Query: 329 RLILNASLYPDMKLT---NMDKKGITFACINSATEGKSG-LSTFALKFRDASIVEEFQTA 384
+L N + MKL+ N+ +TF C + + + + + F KF+D + F+TA
Sbjct: 818 KLCANFRIEKSMKLSPKPNLPNV-LTFMCQDFSEDASNADPAIFTAKFKDEATAGAFKTA 876
Query: 385 VAAHKDK 391
V + K
Sbjct: 877 VQDAQSK 883
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 117 NNDAGKEAEKGDGEDNKQSESK--IDEPVAVEAASSEPEK 154
++D + E GDGE + E K I P VE + E ++
Sbjct: 730 SHDGDETNEDGDGEYEPEVEFKPVIPLPDLVEVKTGEEDE 769
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 244 TSTFAFGSIPKDGSASNSTSASVFG 268
TS F GS+ S S STS+S+FG
Sbjct: 529 TSQFG-GSL----SGSPSTSSSIFG 548
>UNIPROTKB|Q86G90 [details] [associations]
symbol:npp-9 "Protein NPP-9, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000156 InterPro:IPR001876 Pfam:PF00638
PROSITE:PS50196 PROSITE:PS50199 SMART:SM00160 SMART:SM00547
GO:GO:0009792 GO:GO:0007052 GO:GO:0016246 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008270 GO:GO:0005643 GO:GO:0040035
GO:GO:0040039 GO:GO:0046907 GO:GO:0040002 GO:GO:0006997 EMBL:Z34801
HSSP:P49792 GeneTree:ENSGT00690000102083 KO:K12172 GeneID:175443
KEGG:cel:CELE_F59A2.1 UCSC:F59A2.1b.1 CTD:175443
HOGENOM:HOG000125413 NextBio:888184 RefSeq:NP_871701.1
ProteinModelPortal:Q86G90 SMR:Q86G90 IntAct:Q86G90
MINT:MINT-1066564 STRING:Q86G90 PRIDE:Q86G90
EnsemblMetazoa:F59A2.1b.1 EnsemblMetazoa:F59A2.1b.2
EnsemblMetazoa:F59A2.1b.3 WormBase:F59A2.1b InParanoid:Q86G90
OMA:CEDFSED ArrayExpress:Q86G90 Uniprot:Q86G90
Length = 884
Score = 134 (52.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 40/127 (31%), Positives = 69/127 (54%)
Query: 271 VVVETGEENEKVVFSADSVLFEFLDG--SWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V+TGEE+E+V+FSA L+++ KERG G++K+ S + + R++MR +
Sbjct: 760 VEVKTGEEDEEVMFSARCKLYKYYSDLKENKERGLGDIKLLKSND--NKYRIVMRREQVH 817
Query: 329 RLILNASLYPDMKLT---NMDKKGITFACINSATEGKSG-LSTFALKFRDASIVEEFQTA 384
+L N + MKL+ N+ +TF C + + + + + F KF+D + F+TA
Sbjct: 818 KLCANFRIEKSMKLSPKPNLPNV-LTFMCQDFSEDASNADPAIFTAKFKDEATAGAFKTA 876
Query: 385 VAAHKDK 391
V + K
Sbjct: 877 VQDAQSK 883
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 117 NNDAGKEAEKGDGEDNKQSESK--IDEPVAVEAASSEPEK 154
++D + E GDGE + E K I P VE + E ++
Sbjct: 730 SHDGDETNEDGDGEYEPEVEFKPVIPLPDLVEVKTGEEDE 769
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 244 TSTFAFGSIPKDGSASNSTSASVFG 268
TS F GS+ S S STS+S+FG
Sbjct: 529 TSQFG-GSL----SGSPSTSSSIFG 548
>UNIPROTKB|F1PA81 [details] [associations]
symbol:F1PA81 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000156 InterPro:IPR001440
InterPro:IPR001876 InterPro:IPR002130 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00160 Pfam:PF00515
Pfam:PF00638 Pfam:PF00641 PRINTS:PR00153 PROSITE:PS01358
PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199
PROSITE:PS50293 SMART:SM00160 SMART:SM00547 GO:GO:0006457
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270 GO:GO:0005622
Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00690000102083 InterPro:IPR022011
Pfam:PF12185 OMA:SATKCIA EMBL:AAEX03007399 EMBL:AAEX03007398
Ensembl:ENSCAFT00000003160 Uniprot:F1PA81
Length = 3047
Score = 151 (58.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 47/147 (31%), Positives = 75/147 (51%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2211 VEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 2269
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 2270 KLCANHRITPDMTLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 2327
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ +A KD T V + TP SP
Sbjct: 2328 DEAKIAQEKDSLITPHVSRSTTPRESP 2354
Score = 138 (53.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1912 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1969
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1970 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 2027
Score = 126 (49.4 bits), Expect = 0.00051, P = 0.00051
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 270 EVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGN 327
++ V+TGEE+E+ F + LF F ++ WKERG G +K+ + +G+ RLLMR
Sbjct: 1124 KIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKI-LRHKTSGKIRLLMRREQV 1182
Query: 328 YRLILNASLYPDMKLT 343
++ N + PDMKLT
Sbjct: 1183 LKICANHYISPDMKLT 1198
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDN 132
+ E K ND G +A+ G+ N
Sbjct: 1798 NQEKKSEKPLENDTGVQAQDISGQKN 1823
>MGI|MGI:894323 [details] [associations]
symbol:Ranbp2 "RAN binding protein 2" species:10090 "Mus
musculus" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0006457
"protein folding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016925 "protein sumoylation" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042405 "nuclear
inclusion body" evidence=ISO] [GO:0044615 "nuclear pore nuclear
basket" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046907 "intracellular transport" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000156
InterPro:IPR001440 InterPro:IPR001876 InterPro:IPR002130
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515 Pfam:PF00638
Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS01358
PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199
PROSITE:PS50293 SMART:SM00160 SMART:SM00547 UniPathway:UPA00886
MGI:MGI:894323 GO:GO:0006457 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 GO:GO:0016874 GO:GO:0015031 GO:GO:0008270
GO:GO:0005643 Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0051028
GO:GO:0016925 GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
eggNOG:COG5171 GeneTree:ENSGT00690000102083 HOGENOM:HOG000089994
OrthoDB:EOG4J3WG2 InterPro:IPR022011 Pfam:PF12185 CTD:5903
HOVERGEN:HBG092361 KO:K12172 ChiTaRS:RANBP2 EMBL:AF279458
EMBL:AC158593 EMBL:AK041932 EMBL:X87337 IPI:IPI00337844 PIR:S57968
RefSeq:NP_035370.2 UniGene:Mm.431695 UniGene:Mm.485644
ProteinModelPortal:Q9ERU9 SMR:Q9ERU9 IntAct:Q9ERU9 STRING:Q9ERU9
PhosphoSite:Q9ERU9 PaxDb:Q9ERU9 PRIDE:Q9ERU9
Ensembl:ENSMUST00000003310 GeneID:19386 KEGG:mmu:19386
UCSC:uc007fdd.1 InParanoid:Q9ERU9 OMA:GQWDCNV NextBio:296497
Bgee:Q9ERU9 CleanEx:MM_RANBP2 Genevestigator:Q9ERU9
GermOnline:ENSMUSG00000003226 Uniprot:Q9ERU9
Length = 3053
Score = 147 (56.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 47/147 (31%), Positives = 73/147 (49%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2157 VEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 2215
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L M ++ + AC +G+ + A++F+ + + F
Sbjct: 2216 KLCANHRITPDMTLQTMKGTERVWVWTAC--DFADGERKIEHLAVRFKLQDVADSFKKIF 2273
Query: 382 -QTAVAAHKDK--TTAV--LKTPENSP 403
+ A KD T V L TP SP
Sbjct: 2274 DEAKTAQEKDSLITPHVSHLSTPRESP 2300
Score = 138 (53.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1858 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1915
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1916 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1973
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 270 EVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRARG 326
++ V+TGEE+E+ F + LF F DG WKERG G +K+ + +G+ RLLMR
Sbjct: 1175 KIEVKTGEEDEEEFFCNRAKLFRF-DGESKEWKERGIGNVKI-LRHKTSGKIRLLMRREQ 1232
Query: 327 NYRLILNASLYPDMKLT 343
++ N + PDMKLT
Sbjct: 1233 VLKICANHYISPDMKLT 1249
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 231 QNAFT-GLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEK 281
+N F G + TGF+ S + S K + N + ASV G + + +E E+
Sbjct: 2092 KNLFRFGESTTGFNFSFKSALSPSKSPAKLNQSGASV-GTDEESDVTQEEER 2142
>DICTYBASE|DDB_G0291444 [details] [associations]
symbol:DDB_G0291444 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0291444 Pfam:PF05022 EMBL:AAFI02000177
InterPro:IPR007718 RefSeq:XP_635213.1 STRING:Q54EM7
EnsemblProtists:DDB0183896 GeneID:8628159 KEGG:ddi:DDB_G0291444
eggNOG:NOG140707 InParanoid:Q54EM7 OMA:TICEESS Uniprot:Q54EM7
Length = 447
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 27/108 (25%), Positives = 58/108 (53%)
Query: 111 KVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPX 170
K S D+++ + E++ D ED K+ E K+D+ ++SSE + E SS ++E + +
Sbjct: 80 KDSSDSSDSSDSESDSSDSEDEKEKEMKVDKKTEDSSSSSESDT-ESSSSSESEDEKKKE 138
Query: 171 XXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKET-SHETTD 217
++ + +SE ++ +++ + E+EDEK+ S +++D
Sbjct: 139 KESDDSSSSESESDSSSSESESESSESSSSSESESEDEKKKESSDSSD 186
>UNIPROTKB|F1SU29 [details] [associations]
symbol:RANBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0003755 "peptidyl-prolyl
cis-trans isomerase activity" evidence=IEA] [GO:0046907
"intracellular transport" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000156 InterPro:IPR001876
InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160 Pfam:PF00638
Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS01358
PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199 SMART:SM00160
SMART:SM00547 GO:GO:0006457 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0008270 GO:GO:0005622 GO:GO:0046907 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00690000102083
InterPro:IPR022011 Pfam:PF12185 OMA:GQWDCNV EMBL:CU861624
Ensembl:ENSSSCT00000008913 Uniprot:F1SU29
Length = 2808
Score = 143 (55.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 46/147 (31%), Positives = 75/147 (51%)
Query: 271 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 328
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1907 VEVSSGEENEQVVFSHRAKLYRYDKDAGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1965
Query: 329 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF---- 381
+L N + PDM L +M ++ + AC +G+ + A++F+ + + F
Sbjct: 1966 KLCANHRITPDMTLQSMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFKKIF 2023
Query: 382 -QTAVAAHKDK--TTAVLK--TPENSP 403
+ +A KD T V + TP SP
Sbjct: 2024 DEAKIAQEKDFLITPHVSRSTTPRESP 2050
Score = 137 (53.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 325
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1608 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1665
Query: 326 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 382
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1666 QVLKVCANHWITTTMHLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1723
Score = 42 (19.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 26/102 (25%), Positives = 43/102 (42%)
Query: 186 GA-EKSEVDNGKTAGVDKP-ENEDEKETSHETTDXXXXXXXXXXXXT---QNAFT-GLAG 239
GA E S N + G +N D +E + +T+ + +N F G +
Sbjct: 1792 GALEASSTPNPEAPGPALEWDNYDLREDALDTSVSSSSVHASPLASSPVKKNLFRFGEST 1851
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEK 281
TGF+ S + S K + N + ASV G + + +E E+
Sbjct: 1852 TGFNFSFKSALSPSKSPAKLNQSGASV-GTDEDSDVTQEEER 1892
Score = 40 (19.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 185 NGAEKSEVDNGKTAGVDKPENEDEKE 210
+GA + N T V +P + D K+
Sbjct: 951 SGANTATTTNQATRSVKEPTSHDSKD 976
>GENEDB_PFALCIPARUM|PFD0207c [details] [associations]
symbol:PFD0207c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000156 SMART:SM00160
GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351355.1
ProteinModelPortal:Q8I1Y6 PRIDE:Q8I1Y6
EnsemblProtists:PFD0207c:mRNA GeneID:812454 KEGG:pfa:PFD0207c
EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP ProtClustDB:CLSZ2433358
Uniprot:Q8I1Y6
Length = 639
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 60/295 (20%), Positives = 117/295 (39%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDES--SKQT 163
E +++ D + + + E D E+N +E D + + + E+ +D ++
Sbjct: 335 EENDDDEENDDDEENDDDEENDDNEENDDNEENDDNEENDDNENDDDEENDDNDDVNEIN 394
Query: 164 ESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKP-ENEDEKETSHE-TTDXXXX 221
KN+ EN E+ +D G+ +K EN+ EK + +D
Sbjct: 395 SEKNKKSARKSLHLKETPKDENEEEEENLDEGENVDKEKSVENKSEKSDNESIASDASDI 454
Query: 222 XXXXXXXXTQNAFTGLAGTGFS---TSTFAFGSIPKD----GSASNSTSASVFGQEVV-- 272
+ N + FS + FG+I D + N ++ ++ V
Sbjct: 455 KKNDRLFASMNDYNS-PNKLFSEQMSKLNIFGNINIDIEKLRKSLNKNKGNIDEKKEVKM 513
Query: 273 --VETGEENEKVVFSADSV-LFEFLDGSWKERGKGEL--KVNVSTNATGRA-RLLMRARG 326
E ENE++++S S+ + +F+ + K G L K+ + N + R+L +G
Sbjct: 514 TETENAFENEEILYSESSIKISKFIKKNEKYDWSGYLPVKIQIMKNTENKKFRILCFQKG 573
Query: 327 NYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 381
+ RL LN ++ K+ F+ + E K L+ + + F +S +EF
Sbjct: 574 SGRLFLNTDIFDGFKIIPSKNLSALFSGRDICDEKK--LNQYIVTFISSSSRDEF 626
>UNIPROTKB|Q8I1Y6 [details] [associations]
symbol:PFD0207c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000156 SMART:SM00160 GO:GO:0046907
EMBL:AL844503 RefSeq:XP_001351355.1 ProteinModelPortal:Q8I1Y6
PRIDE:Q8I1Y6 EnsemblProtists:PFD0207c:mRNA GeneID:812454
KEGG:pfa:PFD0207c EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP
ProtClustDB:CLSZ2433358 Uniprot:Q8I1Y6
Length = 639
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 60/295 (20%), Positives = 117/295 (39%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDES--SKQT 163
E +++ D + + + E D E+N +E D + + + E+ +D ++
Sbjct: 335 EENDDDEENDDDEENDDDEENDDNEENDDNEENDDNEENDDNENDDDEENDDNDDVNEIN 394
Query: 164 ESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKP-ENEDEKETSHE-TTDXXXX 221
KN+ EN E+ +D G+ +K EN+ EK + +D
Sbjct: 395 SEKNKKSARKSLHLKETPKDENEEEEENLDEGENVDKEKSVENKSEKSDNESIASDASDI 454
Query: 222 XXXXXXXXTQNAFTGLAGTGFS---TSTFAFGSIPKD----GSASNSTSASVFGQEVV-- 272
+ N + FS + FG+I D + N ++ ++ V
Sbjct: 455 KKNDRLFASMNDYNS-PNKLFSEQMSKLNIFGNINIDIEKLRKSLNKNKGNIDEKKEVKM 513
Query: 273 --VETGEENEKVVFSADSV-LFEFLDGSWKERGKGEL--KVNVSTNATGRA-RLLMRARG 326
E ENE++++S S+ + +F+ + K G L K+ + N + R+L +G
Sbjct: 514 TETENAFENEEILYSESSIKISKFIKKNEKYDWSGYLPVKIQIMKNTENKKFRILCFQKG 573
Query: 327 NYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 381
+ RL LN ++ K+ F+ + E K L+ + + F +S +EF
Sbjct: 574 SGRLFLNTDIFDGFKIIPSKNLSALFSGRDICDEKK--LNQYIVTFISSSSRDEF 626
>UNIPROTKB|Q5F473 [details] [associations]
symbol:NUP50 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0046907
"intracellular transport" evidence=IEA] InterPro:IPR000156
InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643
GO:GO:0046907 CTD:10762 eggNOG:NOG255247 HOVERGEN:HBG052697
KO:K14295 OMA:ECKGGDE OrthoDB:EOG4VX25D HOGENOM:HOG000007919
GeneTree:ENSGT00440000035348 EMBL:AADN02006731 EMBL:AJ851427
IPI:IPI00601091 RefSeq:NP_001012559.1 UniGene:Gga.16654 SMR:Q5F473
STRING:Q5F473 Ensembl:ENSGALT00000022998 GeneID:418240
KEGG:gga:418240 InParanoid:Q5F473 NextBio:20821439 Uniprot:Q5F473
Length = 468
Score = 89 (36.4 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 270 EVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY- 328
+V+V +E++ +S LF D +KE+G G L + + N + +LL+RA N
Sbjct: 346 KVIVNEIKEDD-AFYSKKCKLFYKKDNEFKEKGVGTLHLKPAGNE--KTQLLVRADTNLG 402
Query: 329 RLILNASLYPDMKLTNMDKKGITFACI 355
++LN + P M T K + C+
Sbjct: 403 NILLNVLIPPKMPCTRTGKNNVLIVCV 429
Score = 73 (30.8 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 39 GTFKKATDEVLATRRIVKVRRNQTASTPSSN-PFAGIR 75
GTF A++EVL R I K +R AS P S F G +
Sbjct: 25 GTFSVASEEVLKNRAIKKAKRQNVASEPESRGAFKGFK 62
Score = 45 (20.9 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 129 GEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEP 169
G+D Q++S V+ A ++ E G ++ E + EP
Sbjct: 306 GKDANQAKSAT--AVSTNALEAQTESGNNDDKGGEEEEEEP 344
Score = 43 (20.2 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 11/66 (16%), Positives = 26/66 (39%)
Query: 205 NEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSA 264
N ++ S + T+ T + +G S+ +FGS + + + +
Sbjct: 243 NNKTEDASDKKTEAASEKRDPSIGATSTVSFNIGKSGHSSGLSSFGSGTRSSFSFSPGNP 302
Query: 265 SVFGQE 270
+FG++
Sbjct: 303 GLFGKD 308
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 113 SVDANNDAGKEAEKGDGEDNKQSESKI 139
+++A ++G +KG GE+ ++ K+
Sbjct: 322 ALEAQTESGNNDDKG-GEEEEEEPPKV 347
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 117 NNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNE 168
++D+G E E + + + + + + K ED S K+TE+ +E
Sbjct: 208 SSDSGSENESNKTPGTQSASTFGNSKLQQGSTFLFNNKTEDASDKKTEAASE 259
>TAIR|locus:2060837 [details] [associations]
symbol:AT2G30060 "AT2G30060" species:3702 "Arabidopsis
thaliana" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008536 "Ran
GTPase binding" evidence=ISS] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015031 GO:GO:0005643
EMBL:AC004680 GO:GO:0046907 GO:GO:0051028 EMBL:AC004165
eggNOG:COG5171 HOGENOM:HOG000176323 KO:K15306
ProtClustDB:CLSN2682543 EMBL:X97378 EMBL:AY093099 EMBL:BT020304
EMBL:BT020473 EMBL:BT024607 IPI:IPI00538593 PIR:T00592
RefSeq:NP_180567.1 UniGene:At.20964 UniGene:At.67860
ProteinModelPortal:Q8RWG8 SMR:Q8RWG8 IntAct:Q8RWG8 STRING:Q8RWG8
PaxDb:Q8RWG8 PRIDE:Q8RWG8 EnsemblPlants:AT2G30060.1 GeneID:817557
KEGG:ath:AT2G30060 GeneFarm:5096 TAIR:At2g30060 InParanoid:Q8RWG8
OMA:ETGANED PhylomeDB:Q8RWG8 Genevestigator:Q8RWG8
GermOnline:AT2G30060 Uniprot:Q8RWG8
Length = 217
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARG 326
+EV V TGEE+E + S L+ F DGS WKERG G +K + +G+ RL+MR
Sbjct: 37 EEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKF-LKHRVSGKIRLVMRQSK 95
Query: 327 NYRLILNASLYPDMKLTNMDKKGITFACINSA---TEGKSGLSTFALKFRDA----SIVE 379
++ N + M + + G +C+ A ++G+ F ++F + ++
Sbjct: 96 TLKICANHLVGSGMSV--QEHAGNDKSCVWHARDFSDGELKDELFCIRFASVENCKAFMQ 153
Query: 380 EFQTAVAAHKDK 391
+F+ + ++K
Sbjct: 154 KFKEVAESEEEK 165
>TAIR|locus:2007467 [details] [associations]
symbol:SIRANBP "AT1G07140" species:3702 "Arabidopsis
thaliana" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008536 "Ran
GTPase binding" evidence=ISS] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015031 GO:GO:0005643
GO:GO:0046907 GO:GO:0051028 EMBL:AC067971 UniGene:At.23647
eggNOG:COG5171 HOGENOM:HOG000176323 KO:K15306 EMBL:X97377
EMBL:AF057024 EMBL:AF370491 EMBL:AF410294 EMBL:AY097364
EMBL:BT002193 IPI:IPI00528119 PIR:D86206 RefSeq:NP_172194.1
UniGene:At.22610 UniGene:At.74721 ProteinModelPortal:Q9LMK7
SMR:Q9LMK7 IntAct:Q9LMK7 STRING:Q9LMK7 PaxDb:Q9LMK7 PRIDE:Q9LMK7
EnsemblPlants:AT1G07140.1 GeneID:837225 KEGG:ath:AT1G07140
GeneFarm:5095 TAIR:At1g07140 InParanoid:Q9LMK7 OMA:MADPAEH
PhylomeDB:Q9LMK7 ProtClustDB:CLSN2682543 Genevestigator:Q9LMK7
GermOnline:AT1G07140 Uniprot:Q9LMK7
Length = 228
Score = 118 (46.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 45/142 (31%), Positives = 65/142 (45%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARG 326
+EV V TGEE+E V S L+ F D + WKERG G +K N TG+ RL+MR
Sbjct: 35 EEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKFLKHKN-TGKIRLVMRQSK 93
Query: 327 NYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSG-LSTFALKFRDASIVEEFQTAV 385
++ N + M + + G +C+ A + G L R ASI E +T +
Sbjct: 94 TLKICANHFVKSGMSV--QEHVGNEKSCVWHARDFADGELKDELFCIRFASI-ENCKTFM 150
Query: 386 AAHKDKTTAVLKTPENSPKATD 407
K+ + + E S A D
Sbjct: 151 QKFKEVAESE-EEKEESKDAAD 171
>RGD|1307559 [details] [associations]
symbol:Ranbp3l "RAN binding protein 3-like" species:10116
"Rattus norvegicus" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 RGD:1307559 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0046907 IPI:IPI00372039
ProteinModelPortal:D4A9K7 Ensembl:ENSRNOT00000032327 Uniprot:D4A9K7
Length = 465
Score = 127 (49.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 259 SNSTSASVFGQEVVVETGEENEKVVFSADSVLFEFLDG--SWKERGKGELKVNVSTNA-- 314
S+ S +++ V TGEE E V + +F F SW ERG+G L++N + +
Sbjct: 274 SSKPSQKCLLEKIDVITGEETEHNVLKINCKIFVFNKATQSWSERGQGVLRLNDTAGSEC 333
Query: 315 -TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 350
T ++RL+MR +G+ RL+LN+ L+ M+ K +
Sbjct: 334 GTLQSRLIMRNQGSLRLVLNSRLWAQMRTQRASHKSL 370
Score = 37 (18.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 125 EKGDGEDNKQSESKIDEPVAVE 146
EKG+ + +E +DE +E
Sbjct: 43 EKGEHNFKRPAEDSLDEAAELE 64
>UNIPROTKB|G4N558 [details] [associations]
symbol:MGG_13222 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000156
Pfam:PF00638 PROSITE:PS50196 SMART:SM00160 Gene3D:2.30.29.30
InterPro:IPR011993 EMBL:CM001233 GO:GO:0005622 GO:GO:0046907
RefSeq:XP_003711923.1 ProteinModelPortal:G4N558
EnsemblFungi:MGG_13222T0 GeneID:5049089 KEGG:mgr:MGG_13222
Uniprot:G4N558
Length = 526
Score = 97 (39.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 269 QEVVVETGEENEKVVFSADSVLFEFLD---GSWKERGKGELKVNV 310
Q+VVV+ GE E +F A + ++ LD G+WKERG G LKVNV
Sbjct: 370 QKVVVDDGEAGEATIFLARAKVYH-LDKESGAWKERGAGILKVNV 413
Score = 70 (29.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/162 (22%), Positives = 60/162 (37%)
Query: 118 NDAGKEAEKGDGEDNKQSESKIDE---PVAVEAASS-EPEKGEDESSKQTESKNEPXXXX 173
+DA KE + K++ ++DE P + E+A S P+ G + + + K
Sbjct: 65 DDALKE--QVSSPKKKRAHDQLDENHEPSSSESAGSLSPKDGTNRTDRLEPEKKR---AR 119
Query: 174 XXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSH-----ETTDXXXXXXXXXXX 228
E+GA +E T D E +D ++ D
Sbjct: 120 DELVEAEAEDESGASTTESSKKTTEPTDTNEPKDPSLSARLQKPAAGKDDAAPTTTSASA 179
Query: 229 XTQNAFTGLAGTG--FSTSTFAFGSIPKDGSASNSTSASVFG 268
++ F L+GT F T G+ P S+S +AS FG
Sbjct: 180 FAKSGFAKLSGTASPFGTLGATGGASPFGSLGSSSNTASGFG 221
>UNIPROTKB|Q9UKX7 [details] [associations]
symbol:NUP50 "Nuclear pore complex protein Nup50"
species:9606 "Homo sapiens" [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911
PROSITE:PS50196 SMART:SM00160 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0005654 GO:GO:0016032 GO:GO:0044281
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015031 GO:GO:0005975
GO:GO:0031965 EMBL:CH471138 GO:GO:0005643 GO:GO:0019221
GO:GO:0015758 GO:GO:0010827 GO:GO:0055085 GO:GO:0046907
GO:GO:0051028 EMBL:AL008718 PDB:3TJ3 PDBsum:3TJ3 EMBL:AF107840
EMBL:AF116624 EMBL:CR456533 EMBL:AK314454 EMBL:Z82243 EMBL:BC016055
EMBL:BC028125 EMBL:BC070133 EMBL:AL389949 EMBL:AL389950
IPI:IPI00026940 IPI:IPI00170581 RefSeq:NP_009103.2
RefSeq:NP_705931.1 UniGene:Hs.731619 PDB:2EC1 PDBsum:2EC1
ProteinModelPortal:Q9UKX7 SMR:Q9UKX7 IntAct:Q9UKX7 STRING:Q9UKX7
PhosphoSite:Q9UKX7 DMDM:20455193 PaxDb:Q9UKX7 PRIDE:Q9UKX7
DNASU:10762 Ensembl:ENST00000347635 Ensembl:ENST00000396096
Ensembl:ENST00000407019 Ensembl:ENST00000424634 GeneID:10762
KEGG:hsa:10762 UCSC:uc003bfr.3 CTD:10762 GeneCards:GC22P045559
HGNC:HGNC:8065 HPA:HPA047162 MIM:604646 neXtProt:NX_Q9UKX7
PharmGKB:PA31852 eggNOG:NOG255247 HOVERGEN:HBG052697
InParanoid:Q9UKX7 KO:K14295 OMA:ECKGGDE OrthoDB:EOG4VX25D
PhylomeDB:Q9UKX7 ChiTaRS:NUP50 EvolutionaryTrace:Q9UKX7
GenomeRNAi:10762 NextBio:40867 PMAP-CutDB:Q9UKX7
ArrayExpress:Q9UKX7 Bgee:Q9UKX7 CleanEx:HS_NUP50
Genevestigator:Q9UKX7 GermOnline:ENSG00000093000 Uniprot:Q9UKX7
Length = 468
Score = 105 (42.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 38/153 (24%), Positives = 64/153 (41%)
Query: 249 FGSIPKDGSASNSTSASVFGQEV-------VVETGEENEKVVFSADSVLFEFLDGSWKER 301
F + P +G A + G E VV T + E +S LF D +KE+
Sbjct: 317 FPTKPLEGQAEGDSGECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEK 376
Query: 302 GKGELKVNVSTNATGRARLLMRARGNY-RLILNASLYPDMKLTNMDKKGITFACI-NSAT 359
G G L + + N + +LL+RA N ++LN + P+M T K + C+ N
Sbjct: 377 GIGTLHLKPTANQ--KTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPI 434
Query: 360 EGKSGLS--TFALKFRDASIVEEFQTAVAAHKD 390
+ K+ T ++ + + +E + KD
Sbjct: 435 DEKNATMPVTMLIRVKTSEDADELHKILLEKKD 467
Score = 60 (26.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EVL R I K RRN + + F G +
Sbjct: 25 GTFSMASEEVLKNRAIKKAKRRNVGFESDTGGAFKGFK 62
>ZFIN|ZDB-GENE-081104-93 [details] [associations]
symbol:si:ch1073-55a19.2 "si:ch1073-55a19.2"
species:7955 "Danio rerio" [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
InterPro:IPR000156 InterPro:IPR002130 InterPro:IPR020892
Pfam:PF00160 Pfam:PF00638 PRINTS:PR00153 PROSITE:PS00170
PROSITE:PS50072 PROSITE:PS50196 SMART:SM00160
ZFIN:ZDB-GENE-081104-93 GO:GO:0006457 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00690000102083
InterPro:IPR022011 Pfam:PF12185 EMBL:CU638712 IPI:IPI00933182
Ensembl:ENSDART00000135682 Uniprot:F1QCK7
Length = 604
Score = 126 (49.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 270 EVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGN 327
EV V +GEE+E+++F L+ + D WKERG GELK+ RLLMR
Sbjct: 300 EVEVRSGEEDEEILFKERCRLYRWDRDLQQWKERGVGELKILFHPQKKSY-RLLMRREQV 358
Query: 328 YRLILNASLYPDMKLTNMDKKGITFACINSAT---EGKSGLSTFALKFRDASIVEEFQ 382
++ N ++ + LT+M+ A + +AT EG + A+KF+ A + + F+
Sbjct: 359 LKVCANHTISSGITLTHMNSSAN--ALVWTATDYAEGDGKVEQLAVKFKSADLAQSFR 414
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/127 (18%), Positives = 38/127 (29%)
Query: 151 EPEKGEDESSK-------QTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKP 203
EPE+ ED S+ QT+ + +P + S +D +
Sbjct: 99 EPERAEDSSTHTQADTLTQTQVRLDPSHDASVASSSTMELQKTDRSSPIDLSTKRSSESS 158
Query: 204 ENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGS--IPKDGSASNS 261
+ D + + T L S+S G+ P D S++
Sbjct: 159 FSADTAHLTPADPSGTVLTPTDPSSSADPSGTSLTPADPSSSAEPSGTSLTPADPSSTTE 218
Query: 262 TSASVFG 268
S FG
Sbjct: 219 PSGIFFG 225
>RGD|3191 [details] [associations]
symbol:Npap60 "nuclear pore associated protein" species:10116
"Rattus norvegicus" [GO:0005643 "nuclear pore" evidence=IEA;IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=ISS] [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911
PROSITE:PS50196 SMART:SM00160 EMBL:U41845 RGD:3191 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0046907 GO:GO:0051028 GO:GO:0001841 eggNOG:NOG255247
HOVERGEN:HBG052697 KO:K14295 OrthoDB:EOG4VX25D EMBL:BC097337
IPI:IPI00193827 RefSeq:NP_037123.1 UniGene:Rn.123156 UniGene:Rn.3242
ProteinModelPortal:O08587 SMR:O08587 STRING:O08587 PRIDE:O08587
GeneID:25497 KEGG:rno:25497 CTD:25497 HOGENOM:HOG000007919
InParanoid:Q4QR93 NextBio:606893 Genevestigator:O08587
GermOnline:ENSRNOG00000013423 Uniprot:O08587
Length = 467
Score = 105 (42.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 272 VVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY-RL 330
VV T + E +S LF D +KE+G G L ++ AT + +LL+RA N +
Sbjct: 346 VVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTL--HLKPTATQKTQLLVRADTNLGNI 403
Query: 331 ILNASLYPDMKLTNMDKKGITFACI-NSATEGKSGLS--TFALKFRDASIVEEFQTAVAA 387
+LN + P+M T K + C+ N + K T ++ + + +E +
Sbjct: 404 LLNVLIPPNMPCTRTGKNNVLIVCVPNPPLDEKQPTLPVTMLIRVKTSEDADELHKILLQ 463
Query: 388 HKD 390
KD
Sbjct: 464 KKD 466
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EV+ R + K RRN + S F G +
Sbjct: 25 GTFSVASEEVMKNRAVKKAKRRNIGFESDSGGAFKGFK 62
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 100 AATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSE 136
AA SS + G +E DGE+ + E
Sbjct: 306 AAQSKAASSPFSAKASESQAGGSSSECRDGEEEESDE 342
>UNIPROTKB|G3V7R1 [details] [associations]
symbol:Npap60 "Protein Npap60" species:10116 "Rattus
norvegicus" [GO:0001841 "neural tube formation" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0046907 "intracellular
transport" evidence=IEA] InterPro:IPR000156 InterPro:IPR015007
Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196 SMART:SM00160 RGD:3191
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643 GO:GO:0046907
EMBL:CH473950 OMA:ECKGGDE GeneTree:ENSGT00440000035348
Ensembl:ENSRNOT00000018155 Ensembl:ENSRNOT00000055922
Uniprot:G3V7R1
Length = 467
Score = 105 (42.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 272 VVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY-RL 330
VV T + E +S LF D +KE+G G L ++ AT + +LL+RA N +
Sbjct: 346 VVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTL--HLKPTATQKTQLLVRADTNLGNI 403
Query: 331 ILNASLYPDMKLTNMDKKGITFACI-NSATEGKSGLS--TFALKFRDASIVEEFQTAVAA 387
+LN + P+M T K + C+ N + K T ++ + + +E +
Sbjct: 404 LLNVLIPPNMPCTRTGKNNVLIVCVPNPPLDEKQPTLPVTMLIRVKTSEDADELHKILLQ 463
Query: 388 HKD 390
KD
Sbjct: 464 KKD 466
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EV+ R + K RRN + S F G +
Sbjct: 25 GTFSVASEEVMKNRAVKKAKRRNIGFESDSGGAFKGFK 62
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 100 AATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSE 136
AA SS + G +E DGE+ + E
Sbjct: 306 AAQSKAASSPFSAKASESQAGGSSSECRDGEEEESDE 342
>UNIPROTKB|E2QT37 [details] [associations]
symbol:NUP50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911
PROSITE:PS50196 SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005643 GO:GO:0046907 OMA:ECKGGDE
GeneTree:ENSGT00440000035348 EMBL:AAEX03007232
Ensembl:ENSCAFT00000001337 Uniprot:E2QT37
Length = 460
Score = 101 (40.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 272 VVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY-RL 330
VV T + E +S LF D +KE+G G L + + N + +LL+RA N +
Sbjct: 340 VVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTLHLKPTANQ--KTQLLVRADTNLGNI 397
Query: 331 ILNASLYPDMKLTNMDKKGITFACI-NSATEGKSGLSTFALKFR 373
+LN + P+M T K + C+ N + K+ + + R
Sbjct: 398 LLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDEKNAAAPVTMLIR 441
Score = 62 (26.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EVL R I K RRN + S F G +
Sbjct: 25 GTFSVASEEVLKNRAIKKAKRRNVGFESDSGGAFKGFK 62
>UNIPROTKB|F1NA05 [details] [associations]
symbol:LOC770700 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR000156 InterPro:IPR002130 InterPro:IPR020892
Pfam:PF00160 Pfam:PF00638 PRINTS:PR00153 PROSITE:PS00170
PROSITE:PS50072 PROSITE:PS50196 SMART:SM00160 GO:GO:0006457
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00690000102083 EMBL:AADN02017888 EMBL:AADN02017889
EMBL:AADN02017890 EMBL:AADN02017891 EMBL:AADN02017892
EMBL:AADN02017893 EMBL:AADN02017894 EMBL:AADN02017895
EMBL:AADN02017896 EMBL:AADN02017897 EMBL:AADN02017898
EMBL:AADN02017899 IPI:IPI00814530 Ensembl:ENSGALT00000036568
OMA:FSCANAG Uniprot:F1NA05
Length = 434
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 270 EVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGN 327
EV V++GEE+E+++F + L+ + D + WKERG GELK+ T R+LMR
Sbjct: 130 EVEVKSGEEDEEILFKERAKLYRWDRDATQWKERGVGELKILFHTQKK-YYRILMRRDQV 188
Query: 328 YRLILNASLYPDMKLTNMD-KKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 382
++ N + +M L D + +G+ + FA++F+ + F+
Sbjct: 189 LKVCANHVITKEMNLVPSDTSNNVLIWTATDYADGEVKVEQFAVRFKVQELANSFK 244
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 49/256 (19%), Positives = 102/256 (39%)
Query: 11 SKKRAAGRELSRDNPGXXXXXXXXXXXXGTFKKATDEVLATRRIVKVRRNQTASTPSSNP 70
+KK A +E S D+ + + +++ + KV + S+ S +
Sbjct: 282 NKKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSKKVETKKEGSSDSESS 341
Query: 71 FAGIRLXXXXXXXXXXXXXXXXXXKTVSPAATELLESSENKVSVDANNDAGKEAEKGDGE 130
+ ++ SPA++E E E K+ ++ +E+ E
Sbjct: 342 SESVEDEKMDIEKVEIKKEESSDSESSSPASSESKE--EEKMDIEKEETKKEESSSSSSE 399
Query: 131 -DNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEK 189
+ +Q +SK ++ + E SSE EK ++ESS +ES++E E+ +K
Sbjct: 400 SEEEQKKSKKEDSDSDE--SSEDEKKKEESSSSSESEDEKKKEDSDSESS----EDEKKK 453
Query: 190 SEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAF 249
+ D+ ++ + E+ED+K+ +++ + + + + S+S+ +
Sbjct: 454 EDSDSSSSS---ESEDEDKKKKDSSSSESESEKESDSSSSSSESDSSSSSDSDSSSSSSS 510
Query: 250 GSIPKDGSASNSTSAS 265
S S S S S S
Sbjct: 511 SSSSSSSSESESESDS 526
>CGD|CAL0004089 [details] [associations]
symbol:orf19.6665 species:5476 "Candida albicans" [GO:0005643
"nuclear pore" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0006612 "protein targeting to
membrane" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0006607 "NLS-bearing
substrate import into nucleus" evidence=IEA] [GO:0007094 "mitotic
spindle assembly checkpoint" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0031990 "mRNA export from
nucleus in response to heat stress" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] [GO:0000973 "posttranscriptional tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IEA]
[GO:0005487 "nucleocytoplasmic transporter activity" evidence=IEA]
InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911
PROSITE:PS50196 SMART:SM00160 CGD:CAL0004089 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005643 GO:GO:0046907 EMBL:AACQ01000199
eggNOG:COG5171 RefSeq:XP_711417.1 ProteinModelPortal:Q59NZ1
GeneID:3646973 KEGG:cal:CaO19.6665 Uniprot:Q59NZ1
Length = 806
Score = 110 (43.8 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 32/128 (25%), Positives = 64/128 (50%)
Query: 251 SIPKDGSASN-STSASVFGQEVVVETGEENEKVVFSADSVLFEF----LDGSWKERGKGE 305
++P++ + A + ++V ++GEENE F+ S L E+ + + +G GE
Sbjct: 665 TVPEEETGGKFEPVAKLSNEQVDSKSGEENETAKFTIRSKLMEYDSKNSENPYTNKGIGE 724
Query: 306 LKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGL 365
LKV + T ++R+L+RA G+ R++LN + +K ++ G + S +
Sbjct: 725 LKV-LFNEQTKKSRILIRADGSLRVLLNTLILSSVKYDSIGN-GSLIRVPTIDADDSSKI 782
Query: 366 STFALKFR 373
T+ +K +
Sbjct: 783 ITYVIKVK 790
Score = 52 (23.4 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 97 VSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEP 142
VS + SE K + N D+ E+E D ED+K E K+ P
Sbjct: 257 VSSSVPNEASKSETKREL-INLDSDSESES-DKEDSKTKEVKVQGP 300
Score = 42 (19.8 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 15/65 (23%), Positives = 22/65 (33%)
Query: 150 SEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEK 209
S+P + + KQ + KNE + G DKPE + +
Sbjct: 607 SKPTGAFNFAQKQEDQKNETSSTVTTSSSSFGSTKPAFA---FPFGSAKPEDKPEEKKNE 663
Query: 210 ETSHE 214
ET E
Sbjct: 664 ETVPE 668
>ZFIN|ZDB-GENE-030131-1689 [details] [associations]
symbol:nup50 "nucleoporin 50" species:7955 "Danio
rerio" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR000156
InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196
SMART:SM00160 ZFIN:ZDB-GENE-030131-1689 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005643 GO:GO:0046907
GeneTree:ENSGT00440000035348 EMBL:CU694375 EMBL:FP067450
IPI:IPI00497833 Ensembl:ENSDART00000004739 ArrayExpress:F1R0E4
Bgee:F1R0E4 Uniprot:F1R0E4
Length = 422
Score = 98 (39.6 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 40/134 (29%), Positives = 62/134 (46%)
Query: 243 STSTFAFGSI------PKDGSASNSTSASVFGQEV----VVETGEENEKVVF-SADSVLF 291
S+S+ FGS P S SNS +A G++ V E EK F S LF
Sbjct: 262 SSSSAVFGSAVSSVSSPVVNSDSNSQTADENGEDSEEPPVPVVKEIKEKDAFYSKKCKLF 321
Query: 292 EFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY-RLILNASLYPDMKLTNMDKKGI 350
DG +KE+G G L + ++T + + +LL+RA N ++LN + M + K +
Sbjct: 322 YKKDGEFKEKGVGTLHLKMTTES--KLQLLVRADTNLGNILLNIMVPSSMPCSRTGKNNV 379
Query: 351 TFACI-NSATEGKS 363
C+ N + K+
Sbjct: 380 MVVCVPNPPVDDKN 393
Score = 61 (26.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 39 GTFKKATDEVLATRRIVKVRRNQTASTPSSNPFAGIR 75
GTF A+D+V+ R I K +R A S F +
Sbjct: 25 GTFSIASDDVMKNRAIKKAKRRNVAEGESGGAFKAFK 61
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 125 (49.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 69/279 (24%), Positives = 109/279 (39%)
Query: 115 DANNDAGKEAEK-GDGE----DNKQSE--SKIDEPVAVEAASSEPEKGEDESSKQTESKN 167
DA DA KE K GDGE +NK SE + DE +AS E EKG++E K ES +
Sbjct: 1549 DAGKDADKEKVKNGDGEKEANENKNSEVIAVPDEDGRAASASEEKEKGKEEKEKTPESSS 1608
Query: 168 EPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPE-NEDEKETSH---ETTDXXXXXX 223
E E A+ + + KT DKP+ +E +KETS E D
Sbjct: 1609 E---AEKADGKQEEKEEENAKSGDSEE-KTDDTDKPKGSEADKETSDAKGEKKDDEPEKM 1664
Query: 224 XXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENEKVV 283
+ G S T G +P SA +S + G + EE +K
Sbjct: 1665 DTTPVTDEKK--GQKDEKDSGKTEEAGKLPNGESAKDSAA----GAGI-----EERKK-- 1711
Query: 284 FSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLT 343
+ +F DG + E + T + + R +Y L+ + +
Sbjct: 1712 -AKTRFMFNIADGGFTELHSLWQNEERAATVTKKTNEIWHRRHDYWLLAGIIQHGYARWQ 1770
Query: 344 NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 382
++ + + FA +N +G+ F L+ ++ + F+
Sbjct: 1771 DI-QNDVRFAILNEPFKGEINRGNF-LEIKNKFLARRFK 1807
Score = 46 (21.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 22/99 (22%), Positives = 38/99 (38%)
Query: 42 KKATDEVLATRRIVKVRRNQTASTPSSNPFAGIRLXXXXXXXXXXXXXXXXXXKTVSPAA 101
KK++ E ++R + RR + + S P G L + A
Sbjct: 42 KKSSRESKGSKRN-RSRREEIGIS-SPEPGEGPDLDDGEEDRSESEGSDYTPGRKKKKRA 99
Query: 102 TELLESSENKVSVDANNDAGK--EAEKGDGEDNKQSESK 138
+ + N + + N+ A K E E+ + ED+ SE K
Sbjct: 100 STAKDKKRNSSAAERNSAASKRREPEEEEDEDDDDSEPK 138
>WB|WBGene00004306 [details] [associations]
symbol:ran-5 species:6239 "Caenorhabditis elegans"
[GO:0046907 "intracellular transport" evidence=IEA] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 GO:GO:0009792 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0046907 KO:K15304 eggNOG:NOG304969
GeneTree:ENSGT00530000063644 EMBL:FO081545 PIR:T16733
RefSeq:NP_495208.1 ProteinModelPortal:Q21961 SMR:Q21961
STRING:Q21961 PaxDb:Q21961 EnsemblMetazoa:R12C12.2.1
EnsemblMetazoa:R12C12.2.2 GeneID:174011 KEGG:cel:CELE_R12C12.2
UCSC:R12C12.2.1 CTD:174011 WormBase:R12C12.2 HOGENOM:HOG000016971
InParanoid:Q21961 OMA:SAMGPEI NextBio:882115 Uniprot:Q21961
Length = 340
Score = 114 (45.2 bits), Expect = 0.00067, P = 0.00067
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 271 VVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVST-NATGRARLLMR-ARG 326
V + TGEEN+ +F A ++ F L ++ E+G L++N N R++ R + G
Sbjct: 143 VEITTGEENDTNIFQAPCKIWAFDKLKNAYSEKGVCNLRINKRVENGLTHHRIVARTSSG 202
Query: 327 NYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALK 371
R+I+N+ ++ DM L +DK+ I + + SG+ F LK
Sbjct: 203 TLRVIINSKIFSDMLLERVDKR-IRISAMGPEI---SGVQIFLLK 243
>UNIPROTKB|Q5JSK9 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 SMART:SM00527 GO:GO:0005730 GO:GO:0000785
GO:GO:0031492 EMBL:AL391294 UniGene:Hs.282204 HGNC:HGNC:8013
HOGENOM:HOG000113856 ChiTaRS:HMGN5 EMBL:AL357115 EMBL:AL590810
IPI:IPI00642320 STRING:Q5JSK9 Ensembl:ENST00000447319
Uniprot:Q5JSK9
Length = 201
Score = 109 (43.4 bits), Expect = 0.00067, P = 0.00067
Identities = 37/123 (30%), Positives = 55/123 (44%)
Query: 96 TVSPAAT-ELLESSENKVSVDANNDAGKEAE------KGDGEDNKQSESKIDEPVAVEAA 148
T +PA+ E++E E + DA G++ E K + ED K+ E +E
Sbjct: 68 TEAPASEKEIVEVKEENIE-DATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGK 126
Query: 149 SSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDE 208
+ EKGE E K+ ++ NE E+G K ++GK G D+ E ED
Sbjct: 127 EDKDEKGE-EDGKEDKNGNEKGEDAKEKEDGKKG-EDG--KGNGEDGKEKGEDEKEEEDR 182
Query: 209 KET 211
KET
Sbjct: 183 KET 185
>ZFIN|ZDB-GENE-091204-441 [details] [associations]
symbol:si:zfos-979f1.2 "si:zfos-979f1.2"
species:7955 "Danio rerio" [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR000156 InterPro:IPR000315
InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160 Pfam:PF00638
Pfam:PF00643 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
PROSITE:PS50119 PROSITE:PS50196 SMART:SM00160 SMART:SM00336
ZFIN:ZDB-GENE-091204-441 Gene3D:2.30.29.30 InterPro:IPR011993
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50891
GeneTree:ENSGT00690000102083 EMBL:FP236594 EMBL:FP245477
Ensembl:ENSDART00000135619 Uniprot:K7DY47
Length = 664
Score = 116 (45.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 32/109 (29%), Positives = 56/109 (51%)
Query: 276 GEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNAS 335
GEE+E+++F + L+ + D WK+RG G +K+ R +LMR + ++ N S
Sbjct: 377 GEEDEEILFKERTRLYHW-DDQWKDRGFGNIKIFFHP-LKKRYHVLMRHEQSLKVCANHS 434
Query: 336 LYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 382
+ +LT N +T+ I+ + EG A+KFR A ++ F+
Sbjct: 435 ISRGSQLTPMNTSANSLTWTAIDYS-EGDGKTKQLAVKFRTADQMKSFK 482
Score = 44 (20.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 13/59 (22%), Positives = 25/59 (42%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEK 154
T+S T + + ++ A+ND K+ + DN + E +P+ E E+
Sbjct: 325 TLSNMGTSVFAGAPSQTE-KAHNDGEKKKSDDEAPDNNEVEFDPIDPLTEMHPGEEDEE 382
>SGD|S000001800 [details] [associations]
symbol:SRP40 "Nucleolar serine-rich protein" species:4932
"Saccharomyces cerevisiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] SGD:S000001800
Pfam:PF05022 GO:GO:0005730 GO:GO:0006913 EMBL:BK006944 EMBL:X73541
GeneTree:ENSGT00700000104548 eggNOG:NOG318801 InterPro:IPR007718
RefSeq:NP_013018.3 GeneID:853967 KEGG:sce:YKR092C KO:K02927
RefSeq:NP_013020.3 GeneID:853969 KEGG:sce:YKR094C EMBL:L11275
EMBL:Z28317 PIR:S38170 ProteinModelPortal:P32583 DIP:DIP-2115N
IntAct:P32583 MINT:MINT-472548 STRING:P32583 PaxDb:P32583
EnsemblFungi:YKR092C CYGD:YKR092c OMA:DAXESAR OrthoDB:EOG4M68TB
NextBio:975404 Genevestigator:P32583 GermOnline:YKR092C
Uniprot:P32583
Length = 406
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 33/174 (18%), Positives = 70/174 (40%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESK 166
S E+ ++ ++ K A + D ED K+++ EP + ++SSE SS ++ES
Sbjct: 113 SDESSSESESEDETKKRARESDNEDAKETKKAKTEPES--SSSSESSSSGSSSSSESESG 170
Query: 167 NEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXX 226
+E E+ +E + ++ D + D +S ++D
Sbjct: 171 SESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSS-SSDSSSDSDSSSSSSS 229
Query: 227 XXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQEVVVETGEENE 280
++ + + S+ + + S D S+ STS+ + ++G +E
Sbjct: 230 SSSDSDSDSDSSSDSDSSGS-SDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSE 282
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.303 0.122 0.323 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 408 352 0.00078 117 3 11 23 0.43 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 88
No. of states in DFA: 583 (62 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.37u 0.13s 34.50t Elapsed: 00:00:02
Total cpu time: 34.39u 0.13s 34.52t Elapsed: 00:00:02
Start: Tue May 21 06:47:07 2013 End: Tue May 21 06:47:09 2013