BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015351
(408 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/388 (66%), Positives = 304/388 (78%), Gaps = 1/388 (0%)
Query: 22 KLPRPTRVKNKTPAPIQITAEQILREARERQ-EAEIRPPKQKITDSTELADYRLRKRKEF 80
++P+ +VKNK PA +QITAEQ+LREA+ER+ E PP+QKITD EL DY+LRKRK F
Sbjct: 172 RIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTF 231
Query: 81 EDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF 140
ED IR+ R WIKYA+WEES K+ RARS++ERAL+VDYRN TLWLKYAE+EMKN+
Sbjct: 232 EDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ 291
Query: 141 INHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIK 200
+NHARN+WDRA+T LPRV+Q WYKY +MEEMLGNVAGARQ+FERWM W P++Q W SYI
Sbjct: 292 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYIN 351
Query: 201 FELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE 260
FELRY EV+RAR IYERFV HP V WIKYA+FE K AR VYERAVE D+
Sbjct: 352 FELRYKEVDRARTIYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHM 411
Query: 261 AEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
E L+VAFA+FEE KE ER R IYK+ALD I K A++L++ + FEK++GDR GIED
Sbjct: 412 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDI 471
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQ 380
IV KRRFQYE+EV+ NP NYD WFDY+RL ES E REVYERAIANVPP +EKR+W+
Sbjct: 472 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 531
Query: 381 RYIYLWINYALYEELDAGDMERTRDVYQ 408
RYIYLWINYALYEEL+A D ERTR VYQ
Sbjct: 532 RYIYLWINYALYEELEAKDPERTRQVYQ 559
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 137/272 (50%), Gaps = 21/272 (7%)
Query: 61 QKITDSTELADYRLRKRK-EFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE 119
+K D + D + KR+ ++E+ ++ N W Y + ES + R V+ERA+
Sbjct: 460 KKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIA 519
Query: 120 ----VDYRNH-----TLWLKYAEVE-MKNKFINHARNVWDRAVTLLPR----VDQLWYKY 165
+ + H LW+ YA E ++ K R V+ ++ L+P ++W Y
Sbjct: 520 NVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILY 579
Query: 166 IHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPK- 224
E N++ AR+ + P + + YI+ EL+ E +R R++YE+F++ P+
Sbjct: 580 AQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPEN 639
Query: 225 VSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCI 284
++WIK+A+ E +G++DRAR +YE A+ + D E L+ ++ +FE +ETER R +
Sbjct: 640 CTSWIKFAELETILGDIDRARAIYELAISQPRLD-MPEVLWKSYIDFEIEQEETERTRNL 698
Query: 285 YKFALDHIPKGRAEDLYRKFVAFEKQYGDREG 316
Y+ L + + ++ F FE G +EG
Sbjct: 699 YRRLLQ---RTQHVKVWISFAQFELSSG-KEG 726
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 45/340 (13%)
Query: 94 WIKYAKWEESQKDFNRARSVWERALEV---DYRNHTLWLKYAEVEMKNKFINHARNVWDR 150
WIKYA++EE F AR V+ERA+E ++ + L++ +A+ E K R ++
Sbjct: 379 WIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKY 438
Query: 151 AVTLLPRVD--QLWYKYIHMEEMLGNVAGARQI--------FERWMHWMP-DQQGWLSYI 199
A+ + + D +L+ Y E+ G+ G I +E + P + W Y+
Sbjct: 439 ALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYL 498
Query: 200 KFELRYNEVERARQIYERFVQCHPKVS----------TWIKYAKFE-MKMGEVDRARNVY 248
+ E E R++YER + P + WI YA +E ++ + +R R VY
Sbjct: 499 RLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVY 558
Query: 249 ERAVEKLADDE-EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
+ ++E + + ++++ +A+FE R K AR ++ PK + L++ ++
Sbjct: 559 QASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNK---LFKVYIEL 615
Query: 308 EKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAI 367
E Q + + R YE + P N W + LE +G+ +RAR +YE AI
Sbjct: 616 ELQLRE--------FDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAI 667
Query: 368 ANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVY 407
+ + W+ YI E++ + ERTR++Y
Sbjct: 668 SQPRLDMPEVLWKSYIDF--------EIEQEETERTRNLY 699
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 12/191 (6%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+WI YA++E QK+ + AR ++ +N L+ Y E+E++ + + R ++++ +
Sbjct: 575 MWILYAQFEIRQKNLSLARRALGTSIGKCPKN-KLFKVYIELELQLREFDRCRKLYEKFL 633
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHW----MPDQQGWLSYIKFELRYNEV 208
P W K+ +E +LG++ AR I+E + MP+ W SYI FE+ E
Sbjct: 634 EFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVL-WKSYIDFEIEQEET 692
Query: 209 ERARQIYERFVQCHPKVSTWIKYAKFEM---KMGEVDRARNVYERAVEKLADDEEAEQ-- 263
ER R +Y R +Q V WI +A+FE+ K G + + R +YE A + + + EE E+
Sbjct: 693 ERTRNLYRRLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCEEKEERL 752
Query: 264 -LFVAFAEFEE 273
L ++ FEE
Sbjct: 753 MLLESWRSFEE 763
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 156/346 (45%), Gaps = 54/346 (15%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERAL--------EVDYRNHTLW-LKYAEVE-MKNKFIN 142
+++ +AK+EE+QK+F R R +++ AL + ++N+T++ K+ + +++ ++
Sbjct: 415 LYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVS 474
Query: 143 HARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG-------- 194
R ++ V P W+ Y+ + E R+++ER + +P Q
Sbjct: 475 KRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYI 534
Query: 195 --WLSYIKFE-LRYNEVERARQIYERFVQCHPK-----VSTWIKYAKFEMKMGEVDRARN 246
W++Y +E L + ER RQ+Y+ ++ P WI YA+FE++ + AR
Sbjct: 535 YLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARR 594
Query: 247 VYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVA 306
++ K + +LF + E E + +E +R R +Y+ L+ P+ + KF
Sbjct: 595 ALGTSIGKCPKN----KLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTS--WIKFAE 648
Query: 307 FEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYD--IWFDYIRLEESVGNKERAREVYE 364
E GD + + R YE + + ++ +W YI E ER R +Y
Sbjct: 649 LETILGD--------IDRARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYR 700
Query: 365 RAIANVPPAEEKRYWQRYIYLWINYALYEELDA--GDMERTRDVYQ 408
R + +++ +WI++A +E G + + R +Y+
Sbjct: 701 RLLQRT----------QHVKVWISFAQFELSSGKEGSLTKCRQIYE 736
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 520 bits (1340), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 304/388 (78%), Gaps = 1/388 (0%)
Query: 22 KLPRPTRVKNKTPAPIQITAEQILREARERQ-EAEIRPPKQKITDSTELADYRLRKRKEF 80
++P+ +VKNK PA +QITAEQ+LREA+ER+ E PP+QKITD EL DY+LRKRK F
Sbjct: 11 RIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTF 70
Query: 81 EDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF 140
ED IR+ R WIKYA+WEES K+ RARS++ERAL+VDYRN TLWLKYAE+EMKN+
Sbjct: 71 EDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ 130
Query: 141 INHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIK 200
+NHARN+WDRA+T LPRV+Q WYKY +MEEMLGNVAGARQ+FERWM W P++Q W SYI
Sbjct: 131 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYIN 190
Query: 201 FELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE 260
FELRY EVERAR IYERFV HP V WIKYA+FE K AR VYERAVE D+
Sbjct: 191 FELRYKEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHM 250
Query: 261 AEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
E L+VAFA+FEE KE ER R IYK+ALD I K A++L++ + FEK++GDR GIED
Sbjct: 251 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 310
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQ 380
IV KRRFQYE+EV+ NP NYD WFDY+RL ES + REVYERAIANVPP +EKR+W+
Sbjct: 311 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWK 370
Query: 381 RYIYLWINYALYEELDAGDMERTRDVYQ 408
RYIYLW+NYALYEEL+A D ERTR VYQ
Sbjct: 371 RYIYLWVNYALYEELEAKDPERTRQVYQ 398
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 136/272 (50%), Gaps = 21/272 (7%)
Query: 61 QKITDSTELADYRLRKRK-EFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE 119
+K D + D + KR+ ++E+ ++ N W Y + ES + + R V+ERA+
Sbjct: 299 KKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIA 358
Query: 120 ----VDYRNH-----TLWLKYAEVE-MKNKFINHARNVWDRAVTLLPR----VDQLWYKY 165
+ + H LW+ YA E ++ K R V+ ++ L+P ++W Y
Sbjct: 359 NVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYY 418
Query: 166 IHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPK- 224
E N+ AR+ + P + + YI+ EL+ E +R R++YE+F++ P+
Sbjct: 419 AQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPEN 478
Query: 225 VSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCI 284
++WIK+A+ E +G+++RAR +YE A+ + D E L+ ++ +FE +ETER R +
Sbjct: 479 CTSWIKFAELETILGDIERARAIYELAISQPRLD-MPEVLWKSYIDFEIEQEETERTRNL 537
Query: 285 YKFALDHIPKGRAEDLYRKFVAFEKQYGDREG 316
Y+ L + ++ F FE G +EG
Sbjct: 538 YRQLLQRTQHVK---VWISFAQFELSSG-KEG 565
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W+ YA++E QK+ AR ++ +N L+ Y E+E++ + + R ++++ +
Sbjct: 414 MWLYYAQFEIRQKNLPFARRALGTSIGKCPKN-KLFKGYIELELQLREFDRCRKLYEKFL 472
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHW----MPDQQGWLSYIKFELRYNEV 208
P W K+ +E +LG++ AR I+E + MP+ W SYI FE+ E
Sbjct: 473 EFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVL-WKSYIDFEIEQEET 531
Query: 209 ERARQIYERFVQCHPKVSTWIKYAKFEM---KMGEVDRARNVYERAVEKLADDEEAEQ 263
ER R +Y + +Q V WI +A+FE+ K G V + R +YE A + + + EE E+
Sbjct: 532 ERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEKEE 589
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 145/346 (41%), Gaps = 74/346 (21%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALE--------------------------------- 119
+++ +AK+EE+QK+F R R +++ AL+
Sbjct: 254 LYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVS 313
Query: 120 -----------VDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQ-------- 160
+ N+ W Y + + + R V++RA+ +P + +
Sbjct: 314 KRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYI 373
Query: 161 -LWYKYIHMEEMLG-NVAGARQIFERWMHWMPDQQ-----GWLSYIKFELRYNEVERARQ 213
LW Y EE+ + RQ+++ + +P ++ WL Y +FE+R + AR+
Sbjct: 374 YLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433
Query: 214 IYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEE 273
+ PK + Y + E+++ E DR R +YE+ +E ++ + ++ FAE E
Sbjct: 434 ALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTS---WIKFAELET 490
Query: 274 RCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEV 333
+ ERAR IY+ A+ E L++ ++ FE IE + R Y +
Sbjct: 491 ILGDIERARAIYELAISQPRLDMPEVLWKSYIDFE--------IEQEETERTRNLYRQLL 542
Query: 334 RKNPMNYDIWFDYIRLEESVGNK---ERAREVYERAIANVPPAEEK 376
++ + +W + + E S G + + R++YE A + EEK
Sbjct: 543 QRT-QHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEK 587
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 520 bits (1340), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 304/388 (78%), Gaps = 1/388 (0%)
Query: 22 KLPRPTRVKNKTPAPIQITAEQILREARERQ-EAEIRPPKQKITDSTELADYRLRKRKEF 80
++P+ +VKNK PA +QITAEQ+LREA+ER+ E PP+QKITD EL DY+LRKRK F
Sbjct: 11 RIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTF 70
Query: 81 EDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF 140
ED IR+ R WIKYA+WEES K+ RARS++ERAL+VDYRN TLWLKYAE+EMKN+
Sbjct: 71 EDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQ 130
Query: 141 INHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIK 200
+NHARN+WDRA+T LPRV+Q WYKY +MEEMLGNVAGARQ+FERWM W P++Q W SYI
Sbjct: 131 VNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYIN 190
Query: 201 FELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE 260
FELRY EVERAR IYERFV HP V WIKYA+FE K AR VYERAVE D+
Sbjct: 191 FELRYKEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHM 250
Query: 261 AEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
E L+VAFA+FEE KE ER R IYK+ALD I K A++L++ + FEK++GDR GIED
Sbjct: 251 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 310
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQ 380
IV KRRFQYE+EV+ NP NYD WFDY+RL ES + REVYERAIANVPP +EKR+W+
Sbjct: 311 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWK 370
Query: 381 RYIYLWINYALYEELDAGDMERTRDVYQ 408
RYIYLW+NYALYEEL+A D ERTR VYQ
Sbjct: 371 RYIYLWVNYALYEELEAKDPERTRQVYQ 398
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 136/272 (50%), Gaps = 21/272 (7%)
Query: 61 QKITDSTELADYRLRKRK-EFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE 119
+K D + D + KR+ ++E+ ++ N W Y + ES + + R V+ERA+
Sbjct: 299 KKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIA 358
Query: 120 ----VDYRNH-----TLWLKYAEVE-MKNKFINHARNVWDRAVTLLPR----VDQLWYKY 165
+ + H LW+ YA E ++ K R V+ ++ L+P ++W Y
Sbjct: 359 NVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYY 418
Query: 166 IHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPK- 224
E N+ AR+ + P + + YI+ EL+ E +R R++YE+F++ P+
Sbjct: 419 AQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPEN 478
Query: 225 VSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCI 284
++WIK+A+ E +G+++RAR +YE A+ + D E L+ ++ +FE +ETER R +
Sbjct: 479 CTSWIKFAELETILGDIERARAIYELAISQPRLD-MPEVLWKSYIDFEIEQEETERTRNL 537
Query: 285 YKFALDHIPKGRAEDLYRKFVAFEKQYGDREG 316
Y+ L + ++ F FE G +EG
Sbjct: 538 YRQLLQRTQHVK---VWISFAQFELSSG-KEG 565
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W+ YA++E QK+ AR ++ +N L+ Y E+E++ + + R ++++ +
Sbjct: 414 MWLYYAQFEIRQKNLPFARRALGTSIGKCPKN-KLFKGYIELELQLREFDRCRKLYEKFL 472
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHW----MPDQQGWLSYIKFELRYNEV 208
P W K+ +E +LG++ AR I+E + MP+ W SYI FE+ E
Sbjct: 473 EFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVL-WKSYIDFEIEQEET 531
Query: 209 ERARQIYERFVQCHPKVSTWIKYAKFEM---KMGEVDRARNVYERAVEKLADDEEAEQ 263
ER R +Y + +Q V WI +A+FE+ K G V + R +YE A + + + EE E+
Sbjct: 532 ERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEKEE 589
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 145/346 (41%), Gaps = 74/346 (21%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALE--------------------------------- 119
+++ +AK+EE+QK+F R R +++ AL+
Sbjct: 254 LYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVS 313
Query: 120 -----------VDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQ-------- 160
+ N+ W Y + + + R V++RA+ +P + +
Sbjct: 314 KRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYI 373
Query: 161 -LWYKYIHMEEMLG-NVAGARQIFERWMHWMPDQQ-----GWLSYIKFELRYNEVERARQ 213
LW Y EE+ + RQ+++ + +P ++ WL Y +FE+R + AR+
Sbjct: 374 YLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433
Query: 214 IYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEE 273
+ PK + Y + E+++ E DR R +YE+ +E ++ + ++ FAE E
Sbjct: 434 ALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTS---WIKFAELET 490
Query: 274 RCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEV 333
+ ERAR IY+ A+ E L++ ++ FE IE + R Y +
Sbjct: 491 ILGDIERARAIYELAISQPRLDMPEVLWKSYIDFE--------IEQEETERTRNLYRQLL 542
Query: 334 RKNPMNYDIWFDYIRLEESVGNK---ERAREVYERAIANVPPAEEK 376
++ + +W + + E S G + + R++YE A + EEK
Sbjct: 543 QRT-QHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEK 587
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/388 (62%), Positives = 306/388 (78%), Gaps = 1/388 (0%)
Query: 22 KLPRPTRVKNKTPAPIQITAEQILREARERQ-EAEIRPPKQKITDSTELADYRLRKRKEF 80
K+P+ +VKNK PA +QITAEQ+LREA+ER E PPKQKI+D ELADY+ RKRK F
Sbjct: 6 KMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISDPAELADYQQRKRKTF 65
Query: 81 EDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF 140
ED +R+ R WIKYA+WEE Q++ RARS+WERAL+ ++RN TLWLKYAE+EMKNK
Sbjct: 66 EDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQ 125
Query: 141 INHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIK 200
+NHARN+WDRAVT++PRV+Q WYKY +MEEML NVAGARQ+FERWM W P++Q W +Y+
Sbjct: 126 VNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQPEEQAWQTYVN 185
Query: 201 FELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE 260
FELRY E++RAR+IYERFV HP V WIK+A+FE G + +R V+ERAVE DD
Sbjct: 186 FELRYKEIDRAREIYERFVYVHPDVKNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYI 245
Query: 261 AEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
E+LF+AFA FEE KE +RAR IYK+ALDH+PK R ++L++ + EK+YGDR GIED
Sbjct: 246 EERLFIAFARFEEGQKEHDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDV 305
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQ 380
IV KR++QYE EV NP NYD WFDY+RL E+ G++++ RE YERAI+NVPPA EK +W+
Sbjct: 306 IVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWR 365
Query: 381 RYIYLWINYALYEELDAGDMERTRDVYQ 408
RYIYLWINYALYEEL+A D ERTR +Y+
Sbjct: 366 RYIYLWINYALYEELEAEDAERTRQIYK 393
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 156/341 (45%), Gaps = 45/341 (13%)
Query: 94 WIKYAKWEESQKDFNRARSVWERALEV---DYRNHTLWLKYAEVEMKNKFINHARNVWDR 150
WIK+A++EES + +R V+ERA+E DY L++ +A E K + AR ++
Sbjct: 213 WIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKY 272
Query: 151 AVTLLP--RVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQ---------GWLSYI 199
A+ LP R +L+ Y E+ G+ AG + + +Q+ W Y+
Sbjct: 273 ALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYL 332
Query: 200 KFELRYNEVERARQIYERFVQCHPK----------VSTWIKYAKFE-MKMGEVDRARNVY 248
+ + ++ R+ YER + P + WI YA +E ++ + +R R +Y
Sbjct: 333 RLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIY 392
Query: 249 ERAVEKLADDE-EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
+ +E + + +L++ +A+FE RCKE +RAR A+ P+ + L+R ++
Sbjct: 393 KTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDK---LFRGYIDL 449
Query: 308 EKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAI 367
E Q + E + R YE + P N W + LE +G+ +RAR ++E A+
Sbjct: 450 EIQLREFE--------RCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELAV 501
Query: 368 ANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
+ W+ YI E+ G+ E R +Y+
Sbjct: 502 QQPRLDMPELLWKAYIDF--------EVALGETELARQLYE 534
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 62/258 (24%)
Query: 93 VWIKYAKWEESQ-KDFNRARSVWERALEV----DYRNHTLWLKYAEVEMKNKFINHARNV 147
+WI YA +EE + +D R R +++ LE+ + LWL YA+ E++ K + AR
Sbjct: 370 LWINYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKA 429
Query: 148 WDRAVTLLPRVDQL----------------------------------WYKYIHMEEMLG 173
A+ + PR D+L W K+ +E +LG
Sbjct: 430 LGLAIGMCPR-DKLFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLG 488
Query: 174 NVAGARQIFERWMHW----MPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVSTWI 229
+ AR IFE + MP+ W +YI FE+ E E ARQ+YER ++ V W+
Sbjct: 489 DTDRARAIFELAVQQPRLDMPELL-WKAYIDFEVALGETELARQLYERLLERTQHVKVWM 547
Query: 230 KYAKFEMKMGEVDR----------ARNVYERAVE---KLADDEEAEQLFVAFAEFEERCK 276
+AKFEM + D AR +YERA E +L D E L A+ +FE
Sbjct: 548 SFAKFEMGLSHGDSGPDAELNVQLARRIYERANEMLRQLGDKESRVLLLEAWRDFERDAS 607
Query: 277 ETERARCIYKFALDHIPK 294
+++ + + +D +P+
Sbjct: 608 DSQEMQKV----MDKMPR 621
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 20/276 (7%)
Query: 61 QKITDSTELADYRLRKRK-EFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERAL- 118
+K D + D + KRK ++E + N W Y + E++ D ++ R +ERA+
Sbjct: 294 KKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAIS 353
Query: 119 ------EVDY--RNHTLWLKYAEVE-MKNKFINHARNVWDRAVTLLPR----VDQLWYKY 165
E ++ R LW+ YA E ++ + R ++ + L+P +LW Y
Sbjct: 354 NVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLY 413
Query: 166 IHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPK- 224
E + AR+ + P + + YI E++ E ER R +YE+F++ P+
Sbjct: 414 AQFEIRCKELQRARKALGLAIGMCPRDKLFRGYIDLEIQLREFERCRMLYEKFLEFGPEN 473
Query: 225 VSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCI 284
TW+K+A+ E +G+ DRAR ++E AV++ D E L+ A+ +FE ETE AR +
Sbjct: 474 CVTWMKFAELENLLGDTDRARAIFELAVQQPRLD-MPELLWKAYIDFEVALGETELARQL 532
Query: 285 YKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
Y+ L+ + ++ F FE + DA
Sbjct: 533 YERLLERTQHVK---VWMSFAKFEMGLSHGDSGPDA 565
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/382 (60%), Positives = 296/382 (77%), Gaps = 1/382 (0%)
Query: 27 TRVKNKTPAPIQITAEQILREARERQEAEIR-PPKQKITDSTELADYRLRKRKEFEDLIR 85
++VKNK+ AP+QITAEQILR A E Q+ + PPKQ ITD EL DYRLRKR+++E L+
Sbjct: 10 SKVKNKSAAPVQITAEQILRVAHENQQTLPKAPPKQVITDQEELEDYRLRKRQQYESLLG 69
Query: 86 RVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHAR 145
R R ++IKYA WEESQKD RARSV+ER L++D+R T+W+KYAE+EMKNK IN AR
Sbjct: 70 RNRKTAAIYIKYAAWEESQKDLTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKNINLAR 129
Query: 146 NVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRY 205
N+WDRAV LLPRV QLW+KY ME+MLGN AR IFERWM W P+ Q W SY+KFE R
Sbjct: 130 NIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARAIFERWMQWKPEPQAWNSYLKFEQRL 189
Query: 206 NEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLF 265
E R I+E+++ HP + TWIKY KFE ++G ++ AR +++RA+E L +D EQLF
Sbjct: 190 KLFENTRLIFEKYILVHPYIKTWIKYTKFEERLGNIENARTIFQRAIEFLGEDGNDEQLF 249
Query: 266 VAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKR 325
+AFA+FEE+ KE ERAR IYK+A+DH+PK RA+DL+ F FEKQ+GDR GIED ++GK+
Sbjct: 250 IAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNFEKQHGDRIGIEDVVLGKK 309
Query: 326 RFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
RFQYE+E++KN NYDIWFDY+++EE G E+ RE+YER+I N+PP EK++W+RYIYL
Sbjct: 310 RFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYL 369
Query: 386 WINYALYEELDAGDMERTRDVY 407
WINYAL+EEL + DMER R VY
Sbjct: 370 WINYALFEELISKDMERARSVY 391
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 37/317 (11%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEV---DYRNHTLWLKYAEVEMKNKFINHARNVWD 149
WIKY K+EE + AR++++RA+E D + L++ +A+ E K K I AR ++
Sbjct: 211 TWIKYTKFEERLGNIENARTIFQRAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYK 270
Query: 150 RAVTLLP--RVDQLWYKYIHMEEMLGNVAGARQIF---------ERWMHWMPDQQGWLSY 198
A+ +P R L+ + + E+ G+ G + E + W Y
Sbjct: 271 YAIDHVPKSRAKDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDY 330
Query: 199 IKFELRYNEVERARQIYERFVQCHPKVS----------TWIKYAKFE-MKMGEVDRARNV 247
+K E E+E+ R+IYER + P + WI YA FE + +++RAR+V
Sbjct: 331 LKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMERARSV 390
Query: 248 YERAVEKLADDEEA-EQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVA 306
Y ++ + E + ++++ +A FE R ++AR IY A+ PK + ++ +++
Sbjct: 391 YSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAIGRNPKSK---IFDQYIH 447
Query: 307 FEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERA 366
E + G+ + + R YE + P N D W + +LE +G RAR ++E A
Sbjct: 448 LEIELGNFDRV--------RTLYEKYLEIMPDNCDAWCKFAQLETELGETVRARAIFELA 499
Query: 367 IANVPPAEEKRYWQRYI 383
I + W+ +I
Sbjct: 500 IQQPNLDRPEVVWKDFI 516
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 112/219 (51%), Gaps = 18/219 (8%)
Query: 107 FNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQ------ 160
+ R +E ++ + +N+ +W Y ++E N I R +++R++ LP ++
Sbjct: 306 LGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKR 365
Query: 161 ---LWYKYIHMEEMLG-NVAGARQIFERWMHWMPDQQG-----WLSYIKFELRYNEVERA 211
LW Y EE++ ++ AR ++ + +P ++ W+ Y FE+R +++A
Sbjct: 366 YIYLWINYALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKA 425
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
R IY + + +PK + +Y E+++G DR R +YE+ +E + D+ +A + FA+
Sbjct: 426 RLIYGQAIGRNPKSKIFDQYIHLEIELGNFDRVRTLYEKYLEIMPDNCDA---WCKFAQL 482
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQ 310
E ET RAR I++ A+ R E +++ F+ E Q
Sbjct: 483 ETELGETVRARAIFELAIQQPNLDRPEVVWKDFIDSEIQ 521
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 91 TGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDR 150
+ +WI YA +E Q + ++AR ++ +A+ + ++ ++ +Y +E++ + R ++++
Sbjct: 406 SKIWILYANFEIRQLNLDKARLIYGQAIGRNPKSK-IFDQYIHLEIELGNFDRVRTLYEK 464
Query: 151 AVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPD----QQGWLSYIKFELRYN 206
+ ++P W K+ +E LG AR IFE + P+ + W +I E++
Sbjct: 465 YLEIMPDNCDAWCKFAQLETELGETVRARAIFELAIQ-QPNLDRPEVVWKDFIDSEIQLK 523
Query: 207 EVERARQIYERFVQCHPKVSTWIKYAKF 234
+ + +Q+Y + ++ V WI + KF
Sbjct: 524 QFDFVKQLYRKLLEKTNHVKVWIGFIKF 551
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/382 (56%), Positives = 294/382 (76%)
Query: 26 PTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIR 85
P RVKNK PAPIQI+AEQ+LREA +RQE ++ P Q+ D EL +Y+ RKRKEFED +R
Sbjct: 7 PPRVKNKAPAPIQISAEQLLREAVDRQEPALQAPTQRFADLEELHEYQGRKRKEFEDYVR 66
Query: 86 RVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHAR 145
R R N W++YA WE QK+F RARS++ERAL+V+ + LW++Y E EM+N+ INHAR
Sbjct: 67 RNRLNMNNWMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHAR 126
Query: 146 NVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRY 205
N+ DRAVT+LPRVD+ WYKY++MEE LGN+ G RQ+FERWM W PD+ W +YIK E RY
Sbjct: 127 NLLDRAVTILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWEPDEGAWSAYIKLEKRY 186
Query: 206 NEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLF 265
NE ERAR I++RF HP+ WIK+A+FE + G D R VY A+E L +D E+LF
Sbjct: 187 NEFERARAIFQRFTIVHPEPRNWIKWARFEEEYGTSDLVREVYGMAIETLGEDFMDEKLF 246
Query: 266 VAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKR 325
+A+A+FE + KE ERAR IYK+ALD +P+ +A L++ + FEKQ+GDREG+ED I+ KR
Sbjct: 247 IAYAKFEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKR 306
Query: 326 RFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
R QYE+++++NP NYD+WFD+ RLEE+ G+ +R R++YERAIA +PP++EKR+W+RYIYL
Sbjct: 307 RVQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWRRYIYL 366
Query: 386 WINYALYEELDAGDMERTRDVY 407
WI YA++EE++A D++R R +Y
Sbjct: 367 WIFYAIWEEMEAKDVDRARQIY 388
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 145/327 (44%), Gaps = 48/327 (14%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF----------IN 142
++I YAK+E K++ RAR++++ AL+ R+ + L A + +F ++
Sbjct: 245 LFIAYAKFEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILS 304
Query: 143 HARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQ---GWLSYI 199
R ++ + PR +W+ + +EE G+ R I+ER + +P Q W YI
Sbjct: 305 KRRVQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWRRYI 364
Query: 200 KF--------ELRYNEVERARQIYERFVQCHPK-----VSTWIKYAKFEMKMGEVDRARN 246
E+ +V+RARQIY ++ P W+ A+F+++ ++ AR
Sbjct: 365 YLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARK 424
Query: 247 VYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVA 306
+A+ D +LF + + E + E R R +Y+ ++ P + K+
Sbjct: 425 TLGQAIGMCPKD----KLFRGYIDLERQLFEFVRCRTLYEKQIEWNPANSQS--WIKYAE 478
Query: 307 FEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERA 366
E+ G++D+ + F+ + M +W YI EE G +R R++YER
Sbjct: 479 LER------GLDDSERARAIFELGIDQPMLDMPELVWKAYIDFEEYEGEYDRVRQLYERL 532
Query: 367 IANVPPAEEKRYWQRYIYLWINYALYE 393
+ ++ +WINYA +E
Sbjct: 533 LQKTD----------HVKVWINYARFE 549
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 46/294 (15%)
Query: 107 FNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLP---------R 157
++ R +E L+ + RN+ +W +A +E + + R++++RA+ +P R
Sbjct: 303 LSKRRVQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWRR 362
Query: 158 VDQLWYKYIHMEEMLG-NVAGARQIFERWMHWMPDQQG-----WLSYIKFELRYNEVERA 211
LW Y EEM +V ARQI+ + +P ++ WL +F++R +++ A
Sbjct: 363 YIYLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAA 422
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
R+ + + PK + Y E ++ E R R +YE+ +E + Q ++ +AE
Sbjct: 423 RKTLGQAIGMCPKDKLFRGYIDLERQLFEFVRCRTLYEKQIEW---NPANSQSWIKYAEL 479
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYED 331
E ++ERAR I++ +D E +++ ++ FE+ G+ + + + +R Q D
Sbjct: 480 ERGLDDSERARAIFELGIDQPMLDMPELVWKAYIDFEEYEGEYDRVRQ--LYERLLQKTD 537
Query: 332 EVRKNPMNYDIWFDYIRLEESVGN-------------------KERAREVYERA 366
V+ +W +Y R E +V K RAR V+ERA
Sbjct: 538 HVK-------VWINYARFEINVPEEEEEEEEEEEEERPVSDEAKRRARAVFERA 584
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 43/188 (22%)
Query: 93 VWIKYAKWEESQ-KDFNRARSVWERALE-VDYRNHT---LWLKYAEVEMKNKFINHARNV 147
+WI YA WEE + KD +RAR ++ L+ + ++ T +WL A+ +++ + AR
Sbjct: 366 LWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKT 425
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMP-DQQGWL---------- 196
+A+ + P+ D+L+ YI +E L R ++E+ + W P + Q W+
Sbjct: 426 LGQAIGMCPK-DKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPANSQSWIKYAELERGLD 484
Query: 197 --------------------------SYIKFELRYNEVERARQIYERFVQCHPKVSTWIK 230
+YI FE E +R RQ+YER +Q V WI
Sbjct: 485 DSERARAIFELGIDQPMLDMPELVWKAYIDFEEYEGEYDRVRQLYERLLQKTDHVKVWIN 544
Query: 231 YAKFEMKM 238
YA+FE+ +
Sbjct: 545 YARFEINV 552
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 32/114 (28%)
Query: 90 NTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWD 149
N+ WIKYA+ E D RAR+++E + D
Sbjct: 469 NSQSWIKYAELERGLDDSERARAIFELGI------------------------------D 498
Query: 150 RAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFEL 203
+ + +P + +W YI EE G RQ++ER + + W++Y +FE+
Sbjct: 499 QPMLDMPEL--VWKAYIDFEEYEGEYDRVRQLYERLLQKTDHVKVWINYARFEI 550
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/383 (57%), Positives = 291/383 (75%)
Query: 26 PTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIR 85
P RVKNK PAP QI+AEQ+LREA +RQE ++ P Q+ D EL +Y+ RKRKEFED +R
Sbjct: 7 PPRVKNKAPAPQQISAEQLLREAVDRQEPALQAPTQRFADLEELHEYQGRKRKEFEDYVR 66
Query: 86 RVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHAR 145
R R + W++YA+WE QK+F RARSV+ERAL+VD LW++Y E EMK + INHAR
Sbjct: 67 RNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINHAR 126
Query: 146 NVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRY 205
N+ DRAVT+ RVD+LWYKY++MEEMLGN+ G RQ+FERWM W PD+ W +YIK E RY
Sbjct: 127 NLLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWMSWEPDEGAWGAYIKLEKRY 186
Query: 206 NEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLF 265
NE +R R I+ERF HP+ WIK+A+FE + G D R VY A+E L +D E+LF
Sbjct: 187 NEFDRVRAIFERFTVVHPEPKNWIKWARFEEEYGTSDMVREVYGLAIETLGEDFMDEKLF 246
Query: 266 VAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKR 325
+A+A +E + KE ERAR IYK+ALD +P+ ++ L++ + FEKQ+GDREG+ED I+ KR
Sbjct: 247 IAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKR 306
Query: 326 RFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
R QYE+++++NP NYDIWFD++RLEES G+ ER R+VYERAIA +PP++EKR+W+RYIYL
Sbjct: 307 RVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYL 366
Query: 386 WINYALYEELDAGDMERTRDVYQ 408
WI YAL+EEL+A DMER +YQ
Sbjct: 367 WIFYALWEELEAKDMERAHQIYQ 389
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 154/341 (45%), Gaps = 45/341 (13%)
Query: 94 WIKYAKWEESQKDFNRARSVWERALEV---DYRNHTLWLKYAEVEMKNKFINHARNVWDR 150
WIK+A++EE + R V+ A+E D+ + L++ YA E K K AR ++
Sbjct: 209 WIKWARFEEEYGTSDMVREVYGLAIETLGEDFMDEKLFIAYARYEAKLKEFERARAIYKY 268
Query: 151 AVTLLPRVDQ--LWYKYIHMEEMLGNVAGARQI--------FERWMHWMPDQQG-WLSYI 199
A+ LPR L Y E+ G+ G + +E + P W ++
Sbjct: 269 ALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQIKENPKNYDIWFDFV 328
Query: 200 KFELRYNEVERARQIYERFVQCHPK----------VSTWIKYAKFE-MKMGEVDRARNVY 248
+ E +VER R +YER + P + WI YA +E ++ +++RA +Y
Sbjct: 329 RLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEAKDMERAHQIY 388
Query: 249 ERAVEKLADDE-EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
+ + + + ++++ A+FE R + + AR A+ PK + L++ ++
Sbjct: 389 QECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDK---LFKGYIDL 445
Query: 308 EKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAI 367
E+Q + V R+ +E ++ +P N W + LE + + +RAR +YE I
Sbjct: 446 ERQLFE-------FVRCRKL-FEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497
Query: 368 ANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
+ + W+ Y I++ YE G+ +RTR +Y+
Sbjct: 498 SQPVLDMPELLWKSY----IDFEEYE----GEYDRTRALYE 530
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 52/329 (15%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF----------IN 142
++I YA++E K+F RAR++++ AL+ R ++ L A + +F ++
Sbjct: 245 LFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILS 304
Query: 143 HARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQ---GWLSYI 199
R ++ + P+ +W+ ++ +EE G+V R ++ER + MP Q W YI
Sbjct: 305 KRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYI 364
Query: 200 KF--------ELRYNEVERARQIYERFVQCHPK-----VSTWIKYAKFEMKMGEVDRARN 246
EL ++ERA QIY+ ++ P W+ A+FE++ ++ AR
Sbjct: 365 YLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARK 424
Query: 247 VYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVA 306
A+ D +LF + + E + E R R +++ ++ P + KF
Sbjct: 425 TLGHAIGACPKD----KLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSNC--QAWIKFAE 478
Query: 307 FEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYD--IWFDYIRLEESVGNKERAREVYE 364
E+ G++D + + R YE + + ++ +W YI EE G +R R +YE
Sbjct: 479 LER------GLDD--IDRARAIYELGISQPVLDMPELLWKSYIDFEEYEGEYDRTRALYE 530
Query: 365 RAIANVPPAEEKRYWQRYIYLWINYALYE 393
R + ++ +WIN+A +E
Sbjct: 531 RLLEKT----------NHVKVWINFARFE 549
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 63/243 (25%)
Query: 93 VWIKYAKWEESQ-KDFNRARSVWERALE-VDYRNHT---LWLKYAEVEMKNKFINHARNV 147
+WI YA WEE + KD RA +++ + + ++ T +WL A+ E++ + AR
Sbjct: 366 LWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKT 425
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQ-QGWL---------- 196
A+ P+ D+L+ YI +E L R++FE+ + W P Q W+
Sbjct: 426 LGHAIGACPK-DKLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSNCQAWIKFAELERGLD 484
Query: 197 --------------------------SYIKFELRYNEVERARQIYERFVQCHPKVSTWIK 230
SYI FE E +R R +YER ++ V WI
Sbjct: 485 DIDRARAIYELGISQPVLDMPELLWKSYIDFEEYEGEYDRTRALYERLLEKTNHVKVWIN 544
Query: 231 YAKFEMKMGEVD-----------------RARNVYERAVEKLADDEEAEQ---LFVAFAE 270
+A+FE+ + E + RAR V+ERA + + E E+ L A+
Sbjct: 545 FARFEINIPEGEEEDEDEEEKPVSEEAKRRARMVFERAHKVFKEKEMKEERVALLNAWKS 604
Query: 271 FEE 273
FE+
Sbjct: 605 FEQ 607
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 32/130 (24%)
Query: 74 LRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAE 133
+R RK FE I N WIK+A+ E D +RAR+++E +
Sbjct: 453 VRCRKLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI--------------- 497
Query: 134 VEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQ 193
+ V +P + LW YI EE G R ++ER + +
Sbjct: 498 ---------------SQPVLDMPEL--LWKSYIDFEEYEGEYDRTRALYERLLEKTNHVK 540
Query: 194 GWLSYIKFEL 203
W+++ +FE+
Sbjct: 541 VWINFARFEI 550
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1
PE=3 SV=2
Length = 673
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/382 (57%), Positives = 292/382 (76%)
Query: 26 PTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIR 85
P RVKNK PAP+QI+AEQ+LREA +RQE ++ P Q+ D EL +Y+ RKRKEFED +R
Sbjct: 7 PPRVKNKAPAPVQISAEQLLREAVDRQEPSLQAPTQRFADLEELHEYQGRKRKEFEDYVR 66
Query: 86 RVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHAR 145
R R N W++YA WE QK+F RARS++ERAL+VD + LW++Y E EM+N+ INHAR
Sbjct: 67 RNRINMNNWMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHAR 126
Query: 146 NVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRY 205
N+ DRAVT+LPRVD+LWYKY++MEE LGN+ G RQ+FERWM W PD+ W +YIK E RY
Sbjct: 127 NLLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMSWEPDEGAWSAYIKLEKRY 186
Query: 206 NEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLF 265
NE ERAR I++RF HP+ WIK+A+FE + G D R VY AVE L +D E+LF
Sbjct: 187 NEFERARAIFQRFTIVHPEPRNWIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLF 246
Query: 266 VAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKR 325
+A+A FE + KE ERAR IYK+ALD +P+ ++ L++ + FEKQ+GDREG+E+ I+ KR
Sbjct: 247 IAYARFETKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKR 306
Query: 326 RFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
R QYE+++++N NYD+WFD+ RLEE G+ ER R+VYERAIA +PP++EKR+W+RYIYL
Sbjct: 307 RVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHWRRYIYL 366
Query: 386 WINYALYEELDAGDMERTRDVY 407
WI YAL+EE++A D++R R VY
Sbjct: 367 WIFYALWEEMEAKDIDRARQVY 388
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 43/287 (14%)
Query: 111 RSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLP---------RVDQL 161
R +E L+ + RN+ +W +A +E ++ R+V++RA+ +P R L
Sbjct: 307 RVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHWRRYIYL 366
Query: 162 WYKYIHMEEMLG-NVAGARQIFERWMHWMPDQQG-----WLSYIKFELRYNEVERARQIY 215
W Y EEM ++ ARQ++ + +P ++ WL +FE+R ++ AR+
Sbjct: 367 WIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTL 426
Query: 216 ERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERC 275
+ + PK + Y E ++ E R R +YE+ +E + Q ++ +AE E
Sbjct: 427 GQAIGMCPKDKLFRGYIDLERQLFEFVRCRTLYEKQIEW---NPSNSQSWIQYAELERGL 483
Query: 276 KETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRK 335
+TERAR IY+ +D E +++ ++ FE G+ E + + +R Q D V+
Sbjct: 484 DDTERARAIYELGIDQPTLDMPELVWKAYIDFEDDEGEYE--RERQLYERLLQKTDHVK- 540
Query: 336 NPMNYDIWFDYIRLEESVGN----------------KERAREVYERA 366
+W +Y R E +V + K RAR V+ERA
Sbjct: 541 ------VWINYARFEINVPDEEEEEEEEERPISDEAKRRARAVFERA 581
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 145/362 (40%), Gaps = 83/362 (22%)
Query: 94 WIKYAKWEESQKDFNRARSVWERALEV---DYRNHTLWLKYAEVEMKNKFINHARNVWDR 150
WIK+A++EE + R V+ A+E D+ + L++ YA E K K AR ++
Sbjct: 209 WIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFIAYARFETKLKEYERARAIYKY 268
Query: 151 AVTLLPRVDQ--LWYKYIHMEEMLGNVAGARQIF---------ERWMHWMPDQQGWLSYI 199
A+ LPR L Y E+ G+ G + E+ + + W +
Sbjct: 269 ALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLRNYDVWFDFA 328
Query: 200 KFELRYNEVERARQIYERFVQCHPK----------VSTWIKYAKFE-MKMGEVDRARNVY 248
+ E + + ER R +YER + P + WI YA +E M+ ++DRAR VY
Sbjct: 329 RLEEQSGDPERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKDIDRARQVY 388
Query: 249 ERAVEKLADDE-EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
++ + + ++++ A+FE R + AR A+ PK + L+R ++
Sbjct: 389 TECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKDK---LFRGYIDL 445
Query: 308 EKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAR------- 360
E+Q + + R YE ++ NP N W Y LE + + ERAR
Sbjct: 446 ERQLFE--------FVRCRTLYEKQIEWNPSNSQSWIQYAELERGLDDTERARAIYELGI 497
Query: 361 -----------------------------EVYERAIANVPPAEEKRYWQRYIYLWINYAL 391
++YER + ++ +WINYA
Sbjct: 498 DQPTLDMPELVWKAYIDFEDDEGEYERERQLYERLLQKTD----------HVKVWINYAR 547
Query: 392 YE 393
+E
Sbjct: 548 FE 549
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 59/217 (27%)
Query: 93 VWIKYAKWEESQ-KDFNRARSVWERALE-VDYRNHT---LWLKYAEVEMKNKFINHARNV 147
+WI YA WEE + KD +RAR V+ L+ + ++ T +WL A+ E++ + AR
Sbjct: 366 LWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKT 425
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMP-DQQGWL---------- 196
+A+ + P+ D+L+ YI +E L R ++E+ + W P + Q W+
Sbjct: 426 LGQAIGMCPK-DKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELERGLD 484
Query: 197 --------------------------SYIKFELRYNEVERARQIYERFVQCHPKVSTWIK 230
+YI FE E ER RQ+YER +Q V WI
Sbjct: 485 DTERARAIYELGIDQPTLDMPELVWKAYIDFEDDEGEYERERQLYERLLQKTDHVKVWIN 544
Query: 231 YAKFEMKMGEVD----------------RARNVYERA 251
YA+FE+ + + + RAR V+ERA
Sbjct: 545 YARFEINVPDEEEEEEEEERPISDEAKRRARAVFERA 581
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 32/114 (28%)
Query: 90 NTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWD 149
N+ WI+YA+ E D RAR+++E + D
Sbjct: 469 NSQSWIQYAELERGLDDTERARAIYELGI------------------------------D 498
Query: 150 RAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFEL 203
+ +P + +W YI E+ G RQ++ER + + W++Y +FE+
Sbjct: 499 QPTLDMPEL--VWKAYIDFEDDEGEYERERQLYERLLQKTDHVKVWINYARFEI 550
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/381 (55%), Positives = 281/381 (73%)
Query: 28 RVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRV 87
RVKNK PAPIQI+AEQ+LREA ERQ+ PPK ITD EL +++ RKRKEFED IRR
Sbjct: 7 RVKNKNPAPIQISAEQLLREAVERQDVAFVPPKINITDLEELQEFQGRKRKEFEDAIRRN 66
Query: 88 RWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNV 147
R G W++Y +WE QK+F RARSV+ERAL+VD LWLKY E EMKN+ INHARN+
Sbjct: 67 RLAMGHWMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNL 126
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNE 207
+DRAVT LPRVD+LWYKY++MEEMLGN+ G RQ+FERW+ W PD+ W+SYI+ E RY+E
Sbjct: 127 FDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEPDENCWMSYIRMERRYHE 186
Query: 208 VERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVA 267
ERAR IYERFV HP+V+ W+++A+FE + G R VY A++ L + E+ F+A
Sbjct: 187 NERARGIYERFVVVHPEVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIA 246
Query: 268 FAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRF 327
FA+FE R KE ERAR I+K+A+D +P+ ++ +LY+++ FEKQ+GD G+E ++ KRR
Sbjct: 247 FAKFEIRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTVLDKRRL 306
Query: 328 QYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWI 387
QYE ++ +P +YD W D ++LEES G+ RE YE+AIA VP EK W+RY+Y+W+
Sbjct: 307 QYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWL 366
Query: 388 NYALYEELDAGDMERTRDVYQ 408
NY L+EE+D D++R R VYQ
Sbjct: 367 NYCLFEEIDVKDVDRARKVYQ 387
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 159/343 (46%), Gaps = 49/343 (14%)
Query: 94 WIKYAKWEESQKDFNRARSVWERALEV---DYRNHTLWLKYAEVEMKNKFINHARNVWDR 150
W+++A++EE + R V+ A++ ++ N ++ +A+ E++ K AR ++
Sbjct: 207 WLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEYERARTIFKY 266
Query: 151 AVTLLPRVD--QLWYKYIHMEEMLGNVAGA--------RQIFERWMHWMP-DQQGWLSYI 199
A+ +PR +L+ +Y H E+ G+ G R +E+ + P D WL +
Sbjct: 267 AIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDYDTWLDLL 326
Query: 200 KFELRYNEVERARQIYERFVQCHPKVS----------TWIKYAKFE-MKMGEVDRARNVY 248
K E ++ R+ YE+ + P+V W+ Y FE + + +VDRAR VY
Sbjct: 327 KLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWLNYCLFEEIDVKDVDRARKVY 386
Query: 249 ERAVEKLADDE-EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
+ A++ + + +L++ +A FE R ++ + AR AL PK + L+R ++ F
Sbjct: 387 QEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPK---LFRGYIEF 443
Query: 308 EKQYGDREGIEDAI--VGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYER 365
E DAI + R YE + +P W Y LE +G+ +RAR +Y
Sbjct: 444 E----------DAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNL 493
Query: 366 AIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
A+ + W+ YI +EE++ G + R +YQ
Sbjct: 494 AVNQPILETPELVWKAYIDF-----EFEEMEYG---KARSIYQ 528
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 20/236 (8%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERAL----EVDYRNH----- 125
++R ++E L++ ++ W+ K EES D N R +E+A+ EV +N
Sbjct: 303 KRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYV 362
Query: 126 TLWLKYA---EVEMKNKFINHARNVWDRAVTLLPR----VDQLWYKYIHMEEMLGNVAGA 178
+WL Y E+++K+ ++ AR V+ A+ L+P +LW Y E + A
Sbjct: 363 YIWLNYCLFEEIDVKD--VDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVA 420
Query: 179 RQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPK-VSTWIKYAKFEMK 237
R+ R + P + + YI+FE + +R R +YE+++ P+ + W+ YA E K
Sbjct: 421 RKTLGRALGMCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETK 480
Query: 238 MGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIP 293
+G+ DRAR +Y AV + E E ++ A+ +FE E +AR IY+ L P
Sbjct: 481 LGDSDRARALYNLAVNQ-PILETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAP 535
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 62/241 (25%)
Query: 93 VWIKYAKWEE-SQKDFNRARSVWERALE-VDYRNHT---LWLKYAEVEMKNKFINHARNV 147
+W+ Y +EE KD +RAR V++ AL+ + ++ T LWL YA E++ + I+ AR
Sbjct: 364 IWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKT 423
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG------------- 194
RA+ + P+ +L+ YI E+ + R ++E+W+ + P+
Sbjct: 424 LGRALGMCPK-PKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLG 482
Query: 195 ------------------------WLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIK 230
W +YI FE E +AR IY++ ++ P V WI
Sbjct: 483 DSDRARALYNLAVNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVKVWIS 542
Query: 231 YAKFEMKMGEVD----------------RARNVYERAVEKL---ADDEEAEQLFVAFAEF 271
+A FE+ E D RARNV+E A+ L EE L A+ +F
Sbjct: 543 FANFEIAHLEDDDEEPPNEEVASPTAVVRARNVFENALAHLRQQGLKEERVVLLEAWKQF 602
Query: 272 E 272
E
Sbjct: 603 E 603
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/398 (54%), Positives = 289/398 (72%), Gaps = 14/398 (3%)
Query: 25 RPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLI 84
R RV+N+ PA +QITAEQ+LREA+ERQE I+ PKQ++ D EL++++ RKR EFE I
Sbjct: 9 RAPRVRNRAPAAVQITAEQLLREAQERQEPAIQAPKQRVQDLEELSEFQARKRTEFESRI 68
Query: 85 RRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHA 144
R R + W KYA+WE SQ ++ R+RSV+ERAL+VD R+ LW+KY ++E+K + INHA
Sbjct: 69 RYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHA 128
Query: 145 RNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELR 204
RN++DRA+TLLPRVD LWYKY+++EE+L NV+GARQIFERWM W P+ + W SYIK E R
Sbjct: 129 RNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEER 188
Query: 205 YNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE---- 260
YNE++RA IYER++ C P W+ +AKFE G+ D+AR V++ A+E D+EE
Sbjct: 189 YNELDRASAIYERWIACRPIPKNWVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEK 248
Query: 261 AEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
A+ +F AFA E R KE ERAR IYKFAL +P+ ++ LY ++ FEKQ+GDR G+E
Sbjct: 249 AQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELT 308
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESV--GNKE--------RAREVYERAIANV 370
++GKRR QYE+E+ +P NYD WF RLEE ++E R REVYERA+ANV
Sbjct: 309 VLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANV 368
Query: 371 PPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
PPA EKRYW+RYIYLW+ YA +EE+D D +R RDVY+
Sbjct: 369 PPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYK 406
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 62/336 (18%)
Query: 90 NTGVWIKYAKWEESQKD--------FNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFI 141
+ ++ +Y K+E+ D + R +E L D N+ W A +E
Sbjct: 285 SASLYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRA 344
Query: 142 NH----------ARNVWDRAVTLLP---------RVDQLWYKYIHMEEM-LGNVAGARQI 181
+ R V++RAV +P R LW +Y EE+ + AR +
Sbjct: 345 DREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDV 404
Query: 182 FERWMHWMPDQ-----QGWLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEM 236
++ + +P + + WL+Y FE+R +V AR++ + PK + Y + EM
Sbjct: 405 YKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEM 464
Query: 237 KMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGR 296
++ E DR R +YE+ L D ++ + + E ++ ER R I++ A+
Sbjct: 465 RLREFDRVRTLYEKF---LTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQ-SLDM 520
Query: 297 AEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYI--------- 347
E +++ ++ FE G+RE + R YE + + + +W Y
Sbjct: 521 PEIVWKAYIDFEAGEGERE--------RARNLYERLLERTS-HVKVWISYALMEIATLGG 571
Query: 348 -------RLEESVGNKERAREVYERAIANVPPAEEK 376
+E G+ + AR+V+ER ++ EK
Sbjct: 572 GEDEDGNEIEGEAGDADLARQVFERGYKDLRAKGEK 607
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/398 (54%), Positives = 289/398 (72%), Gaps = 14/398 (3%)
Query: 25 RPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLI 84
R RV+N+ PA +QITAEQ+LREA+ERQE I+ PKQ++ D EL++++ RKR EFE I
Sbjct: 9 RAPRVRNRAPAAVQITAEQLLREAQERQEPAIQAPKQRVQDLEELSEFQARKRTEFESRI 68
Query: 85 RRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHA 144
R R + W KYA+WE SQ ++ R+RSV+ERAL+VD R+ LW+KY ++E+K + INHA
Sbjct: 69 RYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHA 128
Query: 145 RNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELR 204
RN++DRA+TLLPRVD LWYKY+++EE+L NV+GARQIFERWM W P+ + W SYIK E R
Sbjct: 129 RNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEER 188
Query: 205 YNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE---- 260
YNE++RA IYER++ C P W+ +AKFE G+ D+AR V++ A+E D+EE
Sbjct: 189 YNELDRASAIYERWIACRPIPKNWVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEK 248
Query: 261 AEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
A+ +F AFA E R KE ERAR IYKFAL +P+ ++ LY ++ FEKQ+GDR G+E
Sbjct: 249 AQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELT 308
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESV--GNKE--------RAREVYERAIANV 370
++GKRR QYE+E+ +P NYD WF RLEE ++E R REVYERA+ANV
Sbjct: 309 VLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANV 368
Query: 371 PPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
PPA EKRYW+RYIYLW+ YA +EE+D D +R RDVY+
Sbjct: 369 PPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYK 406
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 62/336 (18%)
Query: 90 NTGVWIKYAKWEESQKD--------FNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFI 141
+ ++ +Y K+E+ D + R +E L D N+ W A +E
Sbjct: 285 SASLYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRA 344
Query: 142 NH----------ARNVWDRAVTLLP---------RVDQLWYKYIHMEEM-LGNVAGARQI 181
+ R V++RAV +P R LW +Y EE+ + AR +
Sbjct: 345 DREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDV 404
Query: 182 FERWMHWMPDQ-----QGWLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEM 236
++ + +P + + WL+Y FE+R +V AR++ + PK + Y + EM
Sbjct: 405 YKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEM 464
Query: 237 KMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGR 296
++ E DR R +YE+ L D ++ + + E ++ ER R I++ A+
Sbjct: 465 RLREFDRVRTLYEKF---LTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQ-SLDM 520
Query: 297 AEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYI--------- 347
E +++ ++ FE G+RE + R YE + + + +W Y
Sbjct: 521 PEIVWKAYIDFEAGEGERE--------RARNLYERLLERTS-HVKVWISYALMEIATLGG 571
Query: 348 -------RLEESVGNKERAREVYERAIANVPPAEEK 376
+E G+ + AR+V+ER ++ EK
Sbjct: 572 GEDEDGNEIEGEAGDADLARQVFERGYKDLRAKGEK 607
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/398 (54%), Positives = 289/398 (72%), Gaps = 14/398 (3%)
Query: 25 RPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLI 84
R RV+N+ PA +QITAEQ+LREA+ERQE I+ PKQ++ D EL++++ RKR EFE I
Sbjct: 9 RAPRVRNRAPAAVQITAEQLLREAQERQEPTIQAPKQRVQDLEELSEFQARKRTEFESRI 68
Query: 85 RRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHA 144
R R + W KYA+WE SQ ++ R+RSV+ERAL+VD R+ LW+KY ++E+K + INHA
Sbjct: 69 RYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHA 128
Query: 145 RNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELR 204
RN++DRA+TLLPRVD LWYKY+++EE+L NV+GARQIFERWM W P+ + W SYIK E R
Sbjct: 129 RNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEER 188
Query: 205 YNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE---- 260
YNE++RA IYER++ C P W+ +AKFE G+ D+AR V++ A+E D+EE
Sbjct: 189 YNELDRASAIYERWIACRPIPKNWVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEK 248
Query: 261 AEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
A+ +F AFA E R KE ERAR IYKFAL +P+ ++ LY ++ FEKQ+GDR G+E
Sbjct: 249 AQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELT 308
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESV--GNKE--------RAREVYERAIANV 370
++GKRR QYE+E+ +P NYD WF RLEE ++E R REVYERA+ANV
Sbjct: 309 VLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANV 368
Query: 371 PPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
PPA EKRYW+RYIYLW+ YA +EE+D D +R RDVY+
Sbjct: 369 PPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYK 406
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 138/336 (41%), Gaps = 62/336 (18%)
Query: 90 NTGVWIKYAKWEESQKD--------FNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFI 141
+ ++ +Y K+E+ D + R +E L D N+ W A +E
Sbjct: 285 SASLYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRA 344
Query: 142 NH----------ARNVWDRAVTLLP---------RVDQLWYKYIHMEEM-LGNVAGARQI 181
+ R V++RAV +P R LW +Y EE+ + AR +
Sbjct: 345 DREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDV 404
Query: 182 FERWMHWMPDQ-----QGWLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEM 236
++ + +P + + WL+Y FE+R +V AR++ + PK + Y + EM
Sbjct: 405 YKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEM 464
Query: 237 KMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGR 296
++ E DR R +YE+ L D ++ + + E ++ ER R I++ A+
Sbjct: 465 RLREFDRVRTLYEKF---LTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQ-SLDM 520
Query: 297 AEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYI--------- 347
E +++ ++ FE G+RE + R YE + + + +W Y
Sbjct: 521 PEIVWKAYIDFEAGEGERE--------RARNLYERLLERTS-HVKVWISYALMEIATLGG 571
Query: 348 -------RLEESVGNKERAREVYERAIANVPPAEEK 376
+E G+ + AR+V+ER ++ EK
Sbjct: 572 GEDEDGNEIEGEAGDADLARKVFERGYKDLRAKGEK 607
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/386 (53%), Positives = 284/386 (73%), Gaps = 4/386 (1%)
Query: 26 PTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIR 85
P RVKNK PAP+QI+AEQ+LREA +RQE ++ P Q+ D EL +Y+ RKRKEFED +R
Sbjct: 7 PPRVKNKAPAPVQISAEQLLREAVDRQEVNLQTPTQRFADLEELKEYQGRKRKEFEDYVR 66
Query: 86 RVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHAR 145
R R W++YA+WE QK+F RARSV+ERAL+V N LW++Y + E+KN+ INHAR
Sbjct: 67 RNRVRLSNWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHAR 126
Query: 146 NVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRY 205
N+ DRAVT LPRV LWY+Y+++ EMLG++ G RQ+F+RWM W PD+Q W +YI+ E RY
Sbjct: 127 NLLDRAVTRLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQPDEQAWSAYIRLEKRY 186
Query: 206 NEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAV----EKLADDEEA 261
E +RAR+I+ F HP+ TW+K+AKFE + G D R V++ A+ E L DD
Sbjct: 187 GEFDRAREIFRAFTAVHPEPRTWLKWAKFEEEYGTSDTVREVFQTAIQTIAETLGDDAVD 246
Query: 262 EQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAI 321
E++F+AFA +E R +E ERAR IYKF LD++P+ ++ L+ + FEKQ+GD+EG+ED I
Sbjct: 247 ERIFIAFARYEARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDKEGVEDVI 306
Query: 322 VGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQR 381
+ KRR YE++V++N NYD+WFD+ RLEES G+ +R REVYERAIA VPP +EKR+W+R
Sbjct: 307 LTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRHWRR 366
Query: 382 YIYLWINYALYEELDAGDMERTRDVY 407
YI+L++ YA++EE + D+ R R +Y
Sbjct: 367 YIFLFLFYAIWEERETKDIGRARQIY 392
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 40/307 (13%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE----VDYRNH----- 125
++R+ +E+ ++ N VW +A+ EES D +R R V+ERA+ + H
Sbjct: 309 KRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRHWRRYI 368
Query: 126 TLWLKYAE-VEMKNKFINHARNVWDRAVTLLPR----VDQLWYKYIHMEEMLGNVAGARQ 180
L+L YA E + K I AR ++D + L+P ++W H E G + AR+
Sbjct: 369 FLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKAHFEIRQGQLTTARK 428
Query: 181 IFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHP-KVSTWIKYAKFEMKMG 239
R + P + + YI E + E ER R +YE+ V +P TWIK+A+ E +
Sbjct: 429 TLGRAIGMCPKDKIFKEYILLEQKLYEFERCRTLYEKHVMYNPANCQTWIKWAELERGLD 488
Query: 240 EVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAED 299
+++R R ++E AV + D E ++ A+ +FEE E ER R +Y+ L+ K
Sbjct: 489 DLERTRAIFELAVSQPILDM-PEVVWKAYIDFEEEEGEYERTRALYERLLE---KADHPK 544
Query: 300 LYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERA 359
++ + FE D E+ + S K RA
Sbjct: 545 VWISYAQFEINIPDEAEEEEETEEEVE---------------------EKPVSEEAKARA 583
Query: 360 REVYERA 366
R+++ERA
Sbjct: 584 RKIFERA 590
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/385 (54%), Positives = 286/385 (74%), Gaps = 3/385 (0%)
Query: 26 PTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIR 85
P RVKNK AP+QI+AEQ+LREA +RQE ++ P Q+ D EL +Y+ RKRKEFE +
Sbjct: 7 PPRVKNKAAAPVQISAEQLLREATDRQEEALQKPTQRFEDLEELHEYQGRKRKEFESYCQ 66
Query: 86 RVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHAR 145
R +N W++YA+WE QK++ R+RSV+ERAL + TLW++Y E E+K++ IN AR
Sbjct: 67 RSGFNLKNWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVEAELKSRNINFAR 126
Query: 146 NVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRY 205
N+ DRAVT LPRVD+LWYKY+ +EEMLGN+ G RQ+FERWM W PD+ W ++IK E RY
Sbjct: 127 NLLDRAVTHLPRVDKLWYKYVWVEEMLGNIPGVRQVFERWMEWQPDEAAWSAFIKLEQRY 186
Query: 206 NEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLA---DDEEAE 262
E +RAR+I+ RF HP+ WIK++KFE + G DR R V+ERA+E+L+ D+ E
Sbjct: 187 GEYDRAREIFTRFTMVHPEPRNWIKWSKFEEEYGTSDRVREVFERAIEELSKYGDEFVEE 246
Query: 263 QLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIV 322
+LF+A+A +E + + +RAR IYKF L+++P+ +A L++++ FEKQYGDREG+ED ++
Sbjct: 247 RLFIAYARYEAKLHDLDRARAIYKFGLENLPRSKAMLLHKEYTTFEKQYGDREGVEDVVL 306
Query: 323 GKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRY 382
KRR YED VR+NP NYD+WFDY RLEE+ G+ +R REVYE+AIA VPP + KR+W+RY
Sbjct: 307 SKRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPPTQAKRHWRRY 366
Query: 383 IYLWINYALYEELDAGDMERTRDVY 407
IYLWI +AL+EE +A + ER R VY
Sbjct: 367 IYLWIFFALWEETEAKNPERARQVY 391
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 47/309 (15%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE----VDYRNH----- 125
++R+ +EDL+R N VW YA+ EE+ D +R R V+E+A+ + H
Sbjct: 308 KRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPPTQAKRHWRRYI 367
Query: 126 TLWLKYA---EVEMKNKFINHARNVWDRAVTLLPR----VDQLWYKYIHMEEMLGNVAGA 178
LW+ +A E E KN AR V+D + L+P ++W H E G++A A
Sbjct: 368 YLWIFFALWEETEAKNP--ERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQGDLAAA 425
Query: 179 RQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHP-KVSTWIKYAKFEMK 237
R+ R + P + + YI+ E + E R R +YE+ + +P STW+K+A+ E
Sbjct: 426 RKTLGRAIGMCPKDRLFKGYIEMEQKLYEFGRCRILYEKHIAYNPANCSTWVKWAELERG 485
Query: 238 MGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRA 297
+ ++DRAR + + + + D E ++ ++ +FEE E ++ R +Y+ LD K
Sbjct: 486 LDDLDRARAILDMGIAQPVLDM-PEVVWKSYIDFEEEEGEYDKTRSLYERLLD---KADH 541
Query: 298 EDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKE 357
++ + FE + + + DE ++ P+ S K
Sbjct: 542 PKVWISYAQFEIN-----------IPEEAGEGADEEQEQPV-------------SDEAKA 577
Query: 358 RAREVYERA 366
RAR V+ERA
Sbjct: 578 RARRVFERA 586
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 163/380 (42%), Gaps = 79/380 (20%)
Query: 90 NTGVWIKYAKWEESQKDFNRARSVWERALEV--DYRNHTLWLKYAEVEMKNKFINHARNV 147
+ W + K E+ +++RAR ++ R V + RN W+K+++ E + + R V
Sbjct: 172 DEAAWSAFIKLEQRYGEYDRAREIFTRFTMVHPEPRN---WIKWSKFEEEYGTSDRVREV 228
Query: 148 WDRAVTLLPRV------DQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWL---SY 198
++RA+ L + ++L+ Y E L ++ AR I++ + +P + L Y
Sbjct: 229 FERAIEELSKYGDEFVEERLFIAYARYEAKLHDLDRARAIYKFGLENLPRSKAMLLHKEY 288
Query: 199 IKFELRYNE--------VERARQIYERFVQCHPK-VSTWIKYAKFEMKMGEVDRARNVYE 249
FE +Y + + + R+ YE V+ +PK W YA+ E G++DR R VYE
Sbjct: 289 TTFEKQYGDREGVEDVVLSKRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYE 348
Query: 250 RAVEKLADDEEAEQ------LFVAFAEFEE-RCKETERARCIYKFALDHIPKGRAEDLYR 302
+A+ ++ + L++ FA +EE K ERAR +Y L IP +R
Sbjct: 349 KAIAQVPPTQAKRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCLKLIP-------HR 401
Query: 303 KFV---------AFEKQYGD----REGIEDAI---------------------VGKRRFQ 328
F FE + GD R+ + AI G+ R
Sbjct: 402 TFTFAKVWMHKAHFEIRQGDLAAARKTLGRAIGMCPKDRLFKGYIEMEQKLYEFGRCRIL 461
Query: 329 YEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWIN 388
YE + NP N W + LE + + +RAR + + IA + W+ YI
Sbjct: 462 YEKHIAYNPANCSTWVKWAELERGLDDLDRARAILDMGIAQPVLDMPEVVWKSYIDF--- 518
Query: 389 YALYEELDAGDMERTRDVYQ 408
E + G+ ++TR +Y+
Sbjct: 519 -----EEEEGEYDKTRSLYE 533
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 65/229 (28%)
Query: 93 VWIKYAKWEESQ-KDFNRARSVWERALE-VDYRNHT---LWLKYAEVEMKNKFINHARNV 147
+WI +A WEE++ K+ RAR V++ L+ + +R T +W+ A E++ + AR
Sbjct: 369 LWIFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQGDLAAARKT 428
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFER-----------WMHWMPDQQG-- 194
RA+ + P+ D+L+ YI ME+ L R ++E+ W+ W ++G
Sbjct: 429 LGRAIGMCPK-DRLFKGYIEMEQKLYEFGRCRILYEKHIAYNPANCSTWVKWAELERGLD 487
Query: 195 ------------------------WLSYIKFELRYNEVERARQIYERFVQC--HPKVSTW 228
W SYI FE E ++ R +YER + HPKV W
Sbjct: 488 DLDRARAILDMGIAQPVLDMPEVVWKSYIDFEEEEGEYDKTRSLYERLLDKADHPKV--W 545
Query: 229 IKYAKFEMKMGEVD------------------RARNVYERAVEKLADDE 259
I YA+FE+ + E RAR V+ERA + D E
Sbjct: 546 ISYAQFEINIPEEAGEGADEEQEQPVSDEAKARARRVFERAHQGFKDKE 594
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/405 (50%), Positives = 287/405 (70%), Gaps = 24/405 (5%)
Query: 28 RVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRV 87
R+KN+ PAPIQI+AEQ+LREA+ERQEA P QKI D EL +YR R+R EFED +RR
Sbjct: 7 RIKNRAPAPIQISAEQLLREAQERQEAPASAPVQKIEDYEELEEYRGRRRSEFEDRLRRN 66
Query: 88 RWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNV 147
N WIKYA WE SQ + +R RS++ERAL+V+ + LWL+Y E E+K + + HARN+
Sbjct: 67 GLNMSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNL 126
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNE 207
+DRAV++LPR+DQLWYKY+H+EE+LGN+ G RQ+FERWM W P+++ W +YI E+RY+E
Sbjct: 127 YDRAVSILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMKWEPEEKAWHAYINLEVRYDE 186
Query: 208 VERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE----AEQ 263
++RA I+ER V CHP WI++AKFE G +++AR V++ A++ + +DE+ A+
Sbjct: 187 LDRASAIWERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEKAQS 246
Query: 264 LFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVG 323
+F AFA+ E R KE ERAR IYK+AL+ +P+ ++E +Y + FEKQ+G +ED ++G
Sbjct: 247 VFTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTVIG 306
Query: 324 KRRFQYEDEVRKN-----PMNYDIWFDYIRLEE-------SVGNKE--------RAREVY 363
KRR QYE+E+ P +YD WFDY RLEE + G + R REVY
Sbjct: 307 KRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQDQLQQAVKRVREVY 366
Query: 364 ERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
ERAIA VP ++EKR W+RYI+LW+ YAL+EE+D D +RTR++Y+
Sbjct: 367 ERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYK 411
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 25/190 (13%)
Query: 141 INHARNVWDRAVTLLPRVDQ---------LWYKYIHMEEM-LGNVAGARQIFERWMHWMP 190
+ R V++RA+ +P + LW +Y EE+ + R+I++ + +P
Sbjct: 359 VKRVREVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKAAIALVP 418
Query: 191 DQ-----QGWLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRAR 245
+ + W+ Y +FE+R E+ AR+I + PK+ + Y + E+ + E DRAR
Sbjct: 419 HRRFTFAKLWVQYARFEVRRLELTAARKILGAAIGMAPKLKLFSSYIELEVSLKEFDRAR 478
Query: 246 NVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRA-------E 298
+YE+A+E D Q +V FAE E+ +T+RAR +++ + G A E
Sbjct: 479 KIYEKALEW---DPTNSQTWVRFAELEKNLFDTDRARALFELGVGQAEGGEASGGLDMPE 535
Query: 299 DLYRKFVAFE 308
+++ ++ FE
Sbjct: 536 IVWKAYIDFE 545
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 65/333 (19%)
Query: 94 WIKYAKWEESQKDFNRARSVWERALEVDY---------RNHTLWLKYAEVEMKNKFINHA 144
WI++AK+EE + + +AR V++ AL DY + +++ +A++E + K A
Sbjct: 207 WIRWAKFEEDRGNLEKARIVFQMAL--DYIGEDEDAMEKAQSVFTAFAKMETRLKEYERA 264
Query: 145 RNVWDRAVTLLPRV--DQLWYKYIHMEEMLGN-------VAGARQI-FERWMHWM----- 189
R ++ A+ LPR + ++ Y E+ G V G R+I +E +
Sbjct: 265 RVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTVIGKRRIQYEEELAAQEAGGA 324
Query: 190 -PDQQGWLSYIKFE---------------LRYNEVERARQIYERFVQCHPK--------- 224
D W Y + E V+R R++YER + P
Sbjct: 325 PADYDTWFDYSRLEEDAYRALLATGGSQDQLQQAVKRVREVYERAIAQVPSSQEKRDWRR 384
Query: 225 -VSTWIKYAKFE-MKMGEVDRARNVYERAVEKLADDE-EAEQLFVAFAEFEERCKETERA 281
+ W++YA FE + + DR R +Y+ A+ + +L+V +A FE R E A
Sbjct: 385 YIFLWLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELTAA 444
Query: 282 RCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYD 341
R I A+ PK + L+ ++ E + + R YE + +P N
Sbjct: 445 RKILGAAIGMAPKLK---LFSSYIELEVSLKE--------FDRARKIYEKALEWDPTNSQ 493
Query: 342 IWFDYIRLEESVGNKERAREVYERAIANVPPAE 374
W + LE+++ + +RAR ++E + E
Sbjct: 494 TWVRFAELEKNLFDTDRARALFELGVGQAEGGE 526
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W++YA++E + + AR + A+ + + L+ Y E+E+ K + AR ++++A+
Sbjct: 427 LWVQYARFEVRRLELTAARKILGAAIGMAPK-LKLFSSYIELEVSLKEFDRARKIYEKAL 485
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG----------WLSYIKFE 202
P Q W ++ +E+ L + AR +FE + + W +YI FE
Sbjct: 486 EWDPTNSQTWVRFAELEKNLFDTDRARALFELGVGQAEGGEASGGLDMPEIVWKAYIDFE 545
Query: 203 LRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAE 262
E E+ +YER + V WI YA + +++RA + E E+ D + +
Sbjct: 546 FEEREWEKVDALYERLLAKSGHVKVWISYA-----LSKINRATAIEEDEDEEDDDHDHDD 600
Query: 263 QLFVA----FAEFEERCKETER------ARCIYKFALDHIPKGRAED----LYRKFVAFE 308
+ E EE ++ R AR I++ A D++ +D L + +FE
Sbjct: 601 DMAATPSRELTEEEEALRQQRRSALASSAREIFQRAYDNLKSRSLKDERVALLESWKSFE 660
Query: 309 KQYGDREGIEDA------IVGKRRFQYED 331
+Q+G E + +V KRR Q ED
Sbjct: 661 QQHGSAETLSRVEAKFPRVVKKRR-QVED 688
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/388 (49%), Positives = 269/388 (69%), Gaps = 9/388 (2%)
Query: 28 RVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRV 87
RVKNK PA +QI+AEQIL EA ER+E ++ +Q I D ELA+Y+ RKR+E+E +RR
Sbjct: 4 RVKNKAPAALQISAEQILLEAYERKETPLQQTEQ-IADLEELAEYQGRKRQEYEGALRRN 62
Query: 88 RWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNV 147
R NTG W++YA+WE Q++F RARSV+ERALEV+ + W++Y + E+K K INHARN+
Sbjct: 63 RLNTGQWMRYAQWELEQREFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNL 122
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNE 207
DRAVTLLPRVD+LW+ Y+ EE LGN+AG R +FERWMHW P W +Y+ E RY E
Sbjct: 123 LDRAVTLLPRVDKLWFTYVATEETLGNIAGCRAVFERWMHWRPPVTAWAAYVNMEKRYRE 182
Query: 208 VERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLAD------DEEA 261
+RAR I R+V HP W K+AKFEM+ G D R VY ++ L + D
Sbjct: 183 FDRARGILRRYVTVHPGAPAWNKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGVDFLD 242
Query: 262 EQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAI 321
E L +A FE R +E ERAR +Y + L+ +PK ++ LY + AFEKQYG +EGIE+ +
Sbjct: 243 ESLLAGWASFETRHREYERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVV 302
Query: 322 VGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVG-NKERAREVYERAIANVPPAEEKRYWQ 380
+ KRR +YED+++++P +YD WF YI L + G ++ RE++ERA++NVPP KR W+
Sbjct: 303 LTKRRSKYEDQLKEDPADYDTWFSYITLGQESGLEADQIREIFERAVSNVPP-HSKRLWR 361
Query: 381 RYIYLWINYALYEELDAGDMERTRDVYQ 408
RYI+LWI YA++EEL+ ++E+ R++Y+
Sbjct: 362 RYIFLWIKYAIWEELENKEVEKAREIYK 389
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
VW+ +AK+E + AR + R L + L+ Y +E K + + R ++D+ V
Sbjct: 405 VWLLWAKFEIRHGNLPEARKILGRGLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYV 464
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHW----MPDQQGWLSYIKFELRYNEV 208
W +Y +E+MLG+ AR IFE + MP+ W +I+FE
Sbjct: 465 EKFAEFAAPWMEYAELEQMLGDEERARAIFELAVSQPEMEMPELV-WKRFIEFEAEEENY 523
Query: 209 ERARQIYERFV-QCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVA 267
+RAR IY + + + H + WI +A+FE+ + D ++L ++E E
Sbjct: 524 DRARAIYRQLLDRTHGHIKVWISFAQFEVTVPAED----------QELQYNDEGE----- 568
Query: 268 FAEFEERCKETERARCIYKFALDHIPKGRAED----LYRKFVAFEKQYGD 313
AE E + RAR I+ A D + + L+ + FE+++GD
Sbjct: 569 -AEIEVTEEAKARARSIFGEAWDALKAANKREERVVLFESWREFEEEHGD 617
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 70/303 (23%)
Query: 107 FNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF-INHARNVWDRAVTLLP--------R 157
+ RS +E L+ D ++ W Y + ++ + R +++RAV+ +P R
Sbjct: 303 LTKRRSKYEDQLKEDPADYDTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRR 362
Query: 158 VDQLWYKYIHMEEMLGN-VAGARQIFERWMHWMPDQQ-----GWLSYIKFELRYNEVERA 211
LW KY EE+ V AR+I++ + +P ++ WL + KFE+R+ + A
Sbjct: 363 YIFLWIKYAIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEA 422
Query: 212 RQIYERFV-QCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAE 270
R+I R + K + + Y E K+ E DR R +Y++ VEK A E ++ +AE
Sbjct: 423 RKILGRGLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFA---EFAAPWMEYAE 479
Query: 271 FEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYE 330
E+ + ERAR I++ A+ E ++++F+ FE E
Sbjct: 480 LEQMLGDEERARAIFELAVSQPEMEMPELVWKRFIEFEA--------------------E 519
Query: 331 DEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYA 390
+E NYD RAR +Y + + +I +WI++A
Sbjct: 520 EE------NYD----------------RARAIYRQLLDRT---------HGHIKVWISFA 548
Query: 391 LYE 393
+E
Sbjct: 549 QFE 551
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 42/323 (13%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALE---------VDYRNHTLWLKYAEVEMKNKFINH 143
W K+AK+E + + R V+ ++ VD+ + +L +A E +++
Sbjct: 202 AWNKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRHREYER 261
Query: 144 ARNVWDRAVTLLPRVD--QLWYKYIHMEEMLGNVAGARQI--------FERWMHWMP-DQ 192
AR ++ + LP+ +L+ Y E+ G G + +E + P D
Sbjct: 262 ARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVVLTKRRSKYEDQLKEDPADY 321
Query: 193 QGWLSYIKFELRYN-EVERARQIYERFVQCHPKVS---------TWIKYAKFE-MKMGEV 241
W SYI E ++ R+I+ER V P S WIKYA +E ++ EV
Sbjct: 322 DTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIKYAIWEELENKEV 381
Query: 242 DRARNVYERAVEKLADDE-EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDL 300
++AR +Y+ + + + ++++ +A+FE R AR I L G L
Sbjct: 382 EKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRGLGM--SGGKPAL 439
Query: 301 YRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAR 360
Y+ ++A E + + + R Y+ V K W +Y LE+ +G++ERAR
Sbjct: 440 YKGYIALEAKLRE--------FDRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGDEERAR 491
Query: 361 EVYERAIANVPPAEEKRYWQRYI 383
++E A++ + W+R+I
Sbjct: 492 AIFELAVSQPEMEMPELVWKRFI 514
>sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CLF1 PE=3 SV=2
Length = 714
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/390 (42%), Positives = 239/390 (61%), Gaps = 21/390 (5%)
Query: 38 QITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKY 97
QIT+EQIL++A + ++ + PKQ I D EL ++L KRKE+E + + R N G W++Y
Sbjct: 15 QITSEQILQDAFQLKDEPLNRPKQSIQDLDELRSFQLTKRKEYEQQLNKNRLNFGQWLRY 74
Query: 98 AKWE-ESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLP 156
AKWE + DF RARS++ERALEV+ ++ W Y + E+ +K I HARN+ DRAVT LP
Sbjct: 75 AKWEVKHNHDFPRARSIFERALEVNVQHIPFWTHYIQFELSHKNITHARNLLDRAVTTLP 134
Query: 157 RVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYE 216
RVD+LW+ Y+ EE L N R IFERW+ W P+ W +YI +E RY+E + AR+IY
Sbjct: 135 RVDKLWFLYVQTEETLKNYQMVRIIFERWLSWNPNPSAWDAYINYEKRYDEYDNAREIYI 194
Query: 217 RFVQCHPKVSTWIKYAKFEMKMGEVD-----RARNVYERAV------EKLADDEEAEQLF 265
R+VQ H W+K+ FEM +D R RNV+E +V E L D ++
Sbjct: 195 RYVQIHSSGEIWLKWIDFEMNDVPIDPEQVKRIRNVFELSVDSMLASEALRGDISLAEII 254
Query: 266 VAFAEFEERCKETERARCIYKFAL--DHI-----PKGRAEDLYRKFVAFEKQYGDREGIE 318
++ +E KE ERAR I++ L D I P+ R + +Y + FEK YGD++ IE
Sbjct: 255 NKWSLWEISVKEYERARAIFQLMLKSDTIQEIITPEQRNQ-IYSSYTEFEKSYGDKDTIE 313
Query: 319 DAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPP-AEEKR 377
+I+ KR+ +YE+EV K+P +YD W+ YI + + N E RE +ERAI +P A +
Sbjct: 314 SSIMIKRKLKYEEEVNKSPSDYDSWWSYISILQQEDNNEVTRETFERAIKVIPTDAFKST 373
Query: 378 YWQRYIYLWINYALYEELDAGDMERTRDVY 407
W+RYIY+W+ YA +EE G +E R+++
Sbjct: 374 VWRRYIYIWVKYAFWEEFTMGSIENGRNIW 403
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 40/215 (18%)
Query: 93 VWIKYAKWEE-SQKDFNRARSVWERALEV----DYRNHTLWLKYAEVEMKN---KFINHA 144
+W+KYA WEE + R++W +AL+V + +W+ +A+ E++N + A
Sbjct: 381 IWVKYAFWEEFTMGSIENGRNIWNKALKVIPHKRFTFAKIWISFAQFEIRNDPENGLASA 440
Query: 145 RNVWDRAV----TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHW-------MPDQQ 193
R + R++ T+ P+ +L+ YI +E+ LG R+++E+W+ +
Sbjct: 441 RKILGRSIGQSSTVKPK-RKLFKFYIELEQKLGEWDRVRKLYEKWLELSLVGENNLSTIN 499
Query: 194 GWLSYIKFELRYNEVERARQIYER----------FVQCHP---KVSTWIKYAKFEMKMGE 240
L+YI FE E +R ++E F + +P + +I Y K EM+ E
Sbjct: 500 SLLTYIDFEKNIQEHQRCISLFELGVRLAEDDKIFTKVNPLEYMLMQFINYYKEEMRYAE 559
Query: 241 VDRARNVYERAVEKLADDEEAEQLFVAFAEFEERC 275
AR++Y + VE+++ +++++FA FE
Sbjct: 560 ---ARSLYRKLVERVS----TPKVWISFALFESSI 587
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 134/331 (40%), Gaps = 71/331 (21%)
Query: 90 NTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFIN-----HA 144
N W Y +E+ +++ AR ++ R +++ + + +WLK+ + EM + I+
Sbjct: 169 NPSAWDAYINYEKRYDEYDNAREIYIRYVQI-HSSGEIWLKWIDFEMNDVPIDPEQVKRI 227
Query: 145 RNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHW---------------- 188
RNV++ +V + + E + G+++ A +I +W W
Sbjct: 228 RNVFELSVDSM----------LASEALRGDISLA-EIINKWSLWEISVKEYERARAIFQL 276
Query: 189 -----------MPDQ--QGWLSYIKFELRYNE---VERARQI-----YERFVQCHPK-VS 226
P+Q Q + SY +FE Y + +E + I YE V P
Sbjct: 277 MLKSDTIQEIITPEQRNQIYSSYTEFEKSYGDKDTIESSIMIKRKLKYEEEVNKSPSDYD 336
Query: 227 TWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQ-------LFVAFAEFEE-RCKET 278
+W Y + + R +ERA++ + D ++V +A +EE
Sbjct: 337 SWWSYISILQQEDNNEVTRETFERAIKVIPTDAFKSTVWRRYIYIWVKYAFWEEFTMGSI 396
Query: 279 ERARCIYKFALDHIPKGRAE--DLYRKFVAFEKQYGDREGIEDA--IVGKRRFQYEDEVR 334
E R I+ AL IP R ++ F FE + G+ A I+G+ Q
Sbjct: 397 ENGRNIWNKALKVIPHKRFTFAKIWISFAQFEIRNDPENGLASARKILGRSIGQSSTVKP 456
Query: 335 KNPMNYDIWFDYIRLEESVGNKERAREVYER 365
K + + YI LE+ +G +R R++YE+
Sbjct: 457 KRKL----FKFYIELEQKLGEWDRVRKLYEK 483
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 288 bits (736), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/389 (38%), Positives = 231/389 (59%), Gaps = 18/389 (4%)
Query: 38 QITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKY 97
Q+T+++IL A E+ +++ P+Q I D+ EL Y+ KRKEFE I + R N G W +Y
Sbjct: 67 QVTSKEILDVAFEKSKSKFTTPRQTIQDTEELQSYQQTKRKEFEQHINKNRLNLGQWTRY 126
Query: 98 AKWE-ESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLP 156
AKWE E+ DF RARS+ ERAL+V+ ++ W++Y ++E+ +K INHARN+ +RA+ LP
Sbjct: 127 AKWEIENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLP 186
Query: 157 RVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYE 216
RV++LW+ Y+ EEML N R +FERW+ W PD W +YI FE RY E E R I++
Sbjct: 187 RVNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDTSVWDAYINFEARYEEKENVRTIFK 246
Query: 217 RFVQCHPKVSTWIKYAKFEMKMG--EVDRARNVYERAVEKLA--------DDEEAEQLFV 266
++V P TW K+ K+EM+ +V+ R V+E AV+ L DDEE +
Sbjct: 247 KYVHEFPNAGTWYKWIKYEMENNRDDVNTVRAVFESAVDTLLSNKSEENDDDEEFATIIS 306
Query: 267 AFAEFEERCKETERARCIYKFALDH------IPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
++ +E C E RA I+K LD+ I +Y FV FEK +G+++ IE +
Sbjct: 307 SWTSWEVSCGEASRANEIFKLLLDNKTNKLEISDKTKSSIYTAFVEFEKNFGNKDSIEQS 366
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRY-W 379
++ KRR +YE E++ +P +YD W+ Y+ L ++ NK +++ NV + K W
Sbjct: 367 VLIKRRIKYEQEIQNDPYDYDSWWKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSIKW 426
Query: 380 QRYIYLWINYALYEELDAGDMERTRDVYQ 408
+RYI WI YA +EE+ + + R+++
Sbjct: 427 RRYIMFWIWYAFWEEMTNNNPDSAREIWN 455
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 45/260 (17%)
Query: 162 WYKYIHMEEMLGNVAGARQIFERW----MHWMPDQQGWLSYIKF--------ELRYNEVE 209
W+KY+ + + N + F++ +H W YI F E+ N +
Sbjct: 389 WWKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSIKWRRYIMFWIWYAFWEEMTNNNPD 448
Query: 210 RARQIYERFVQCHPKVS-----TWIKYAKFEMKMGE--VDRARNVYERAVEKLADDEEAE 262
AR+I+ ++ P S WI Y++FE++ E + +AR + RA+ + + ++
Sbjct: 449 SAREIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDGLAKARKILGRAIGQTSINKPKI 508
Query: 263 QLFVAFAEFEERCKETERARCIYK--FALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
++F + + E++ + R R +++ + + +E + K+V FE + + D+
Sbjct: 509 KIFKYYIDLEKKLGDWNRVRLLFQKWLEVSLLTTSSSELVIEKYVEFESSIEEYDRC-DS 567
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESV-------GNKERAREVYERAIANVPPA 373
I+ R ++ +NP Y F+ RL E ++ RE+Y + P A
Sbjct: 568 ILSSAR-----QLSENP-EYSSSFNLQRLLEITVEFYKEEMQYDKIREIYRALLDKDPNA 621
Query: 374 EEKRYWQRYIYLWINYALYE 393
WI++AL+E
Sbjct: 622 HN----------WISFALFE 631
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 98/264 (37%), Gaps = 85/264 (32%)
Query: 94 WIKYAKWEE-SQKDFNRARSVWERALEV----DYRNHTLWLKYAEVEMKNK--FINHARN 146
WI YA WEE + + + AR +W L+V + +W+ Y+E E++N + AR
Sbjct: 433 WIWYAFWEEMTNNNPDSAREIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDGLAKARK 492
Query: 147 VWDRAVTLL----PRVDQLWYKYIHMEEMLGNVAGARQIFERWM--HWMPDQQGWL---S 197
+ RA+ P++ Y YI +E+ LG+ R +F++W+ + L
Sbjct: 493 ILGRAIGQTSINKPKIKIFKY-YIDLEKKLGDWNRVRLLFQKWLEVSLLTTSSSELVIEK 551
Query: 198 YIKFELRYNEVERA------------------------------------------RQIY 215
Y++FE E +R R+IY
Sbjct: 552 YVEFESSIEEYDRCDSILSSARQLSENPEYSSSFNLQRLLEITVEFYKEEMQYDKIREIY 611
Query: 216 ERFVQCHPKVSTWIKYAKFEMKM-----------------------GEVDRARNVYERAV 252
+ P WI +A FE + +++ RN++E A+
Sbjct: 612 RALLDKDPNAHNWISFALFESSIPSAEQLEEYLQGDNEEFEATVDESQIESTRNIFEEAM 671
Query: 253 EKLADDEEAEQLFV---AFAEFEE 273
D ++ E V A+ +FEE
Sbjct: 672 TYFKDKDDKESRLVIIEAWRDFEE 695
>sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CLF1 PE=3 SV=1
Length = 684
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 219/377 (58%), Gaps = 10/377 (2%)
Query: 39 ITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYA 98
ITA+ IL++A +++ K I D EL D++ RKR E+E +++R R + W++YA
Sbjct: 11 ITADNILKDAFSQKKQIAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRYA 70
Query: 99 KWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRV 158
++E QKD RARS++ERAL VD+ LW++Y + E+K K INHARN+ DRA LPRV
Sbjct: 71 QFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRV 130
Query: 159 DQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERF 218
D+LW+KY+ +EE LGN R I+ RW + P W S+I+FE R E R IY +F
Sbjct: 131 DKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSKF 190
Query: 219 VQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDE-----EAEQLFVAFAEFEE 273
V HP++ TW+K+ +FE G++ R V+ A++ L + E++ +FA +E
Sbjct: 191 VLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEA 250
Query: 274 RCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEV 333
E ER+R +Y+ A++ P A L + + FEK++G + +ED ++ KR+ +YE +
Sbjct: 251 SQGEYERSRTLYRLAVERWPISEA--LKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYL 308
Query: 334 RKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAE--EKRYWQRYIYLWINYAL 391
+ +P +Y W+ YI L E +E+ ++ I P + W+RYI + + Y +
Sbjct: 309 KSDPYHYSTWWVYIDLVEE-KYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYLV 367
Query: 392 YEELDAGDMERTRDVYQ 408
Y EL D+ R VYQ
Sbjct: 368 YLELTINDLPTIRSVYQ 384
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 47/275 (17%)
Query: 112 SVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPR----VDQLWYKYIH 167
S W+R + + R +L Y E+ + + + R+V+ + ++P +LW Y
Sbjct: 353 SSWKRYIRICVR----YLVYLELTIND--LPTIRSVYQDILDIIPHKKFTFGKLWIMYAE 406
Query: 168 MEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPK-VS 226
E N+ AR+I + P + + YI E+R E +R R++YE+++ +P V
Sbjct: 407 FEIRQNNLLKARKILGVSLGKSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQ 466
Query: 227 TWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVA--FAEFEERCKETERARCI 284
+W+ YA+ E +G+ DR+R +Y+ ++ E++QL V + FE E E+AR +
Sbjct: 467 SWLDYAELEENLGDEDRSRGIYDISMSNNVGLSESDQLIVIQRYIAFETDAAEYEKAREL 526
Query: 285 YKFALDH--------IPKGRAEDLY---RKFVAFEKQYGDREGIEDAIVGKRRFQYEDEV 333
Y+ L I + E + +A+++ + D +D G+ F +E
Sbjct: 527 YEKYLILSRYDVNIWINQALFESTIPTETQLIAYQQSHQDGNFDDD---GEEEFSFEI-- 581
Query: 334 RKNPMNYDIWFDYIRLEESVGNKERAREVYERAIA 368
+ NK R ++E+AI+
Sbjct: 582 ------------------TPENKHHTRAIFEKAIS 598
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 156/351 (44%), Gaps = 56/351 (15%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWL--------KYAEVEMKNKFINHA 144
W+K+ ++E++ D + R+V+ AL+ L +A E +
Sbjct: 199 TWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEASQGEYERS 258
Query: 145 RNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQI--------FERWMHWMP-DQQGW 195
R ++ AV P + L + I E+ G+ I +E+++ P W
Sbjct: 259 RTLYRLAVERWPISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYLKSDPYHYSTW 318
Query: 196 LSYIKF-ELRYNEVERARQIYERFVQ-CHPKV----STWIKYAK--------FEMKMGEV 241
YI E +Y E + ++ F++ PK S+W +Y + E+ + ++
Sbjct: 319 WVYIDLVEEKYQE--QLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYLVYLELTINDL 376
Query: 242 DRARNVYERAVEKLADDE-EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDL 300
R+VY+ ++ + + +L++ +AEFE R +AR I +L PK + +
Sbjct: 377 PTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLGKSPKPK---V 433
Query: 301 YRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAR 360
++ ++ E + + + + R YE + NP + W DY LEE++G+++R+R
Sbjct: 434 FKYYINLEIRLKEFDRV--------RKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSR 485
Query: 361 EVYERAIAN---VPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
+Y+ +++N + +++ QRYI E DA + E+ R++Y+
Sbjct: 486 GIYDISMSNNVGLSESDQLIVIQRYIAF--------ETDAAEYEKARELYE 528
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 159 DQLWYKYI--------HMEEMLGNVAGARQIFERWMHWMPDQQG-----WLSYIKFELRY 205
D W +YI ++E + ++ R +++ + +P ++ W+ Y +FE+R
Sbjct: 352 DSSWKRYIRICVRYLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQ 411
Query: 206 NEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLF 265
N + +AR+I + PK + Y E+++ E DR R +YE+ ++ + + Q +
Sbjct: 412 NNLLKARKILGVSLGKSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDF---NPSSVQSW 468
Query: 266 VAFAEFEERCKETERARCIYKFAL-DHIPKGRAEDL--YRKFVAFEKQYGDREGIEDAIV 322
+ +AE EE + +R+R IY ++ +++ ++ L ++++AFE + E
Sbjct: 469 LDYAELEENLGDEDRSRGIYDISMSNNVGLSESDQLIVIQRYIAFETDAAEYE------- 521
Query: 323 GKRRFQYEDEVRKNPMNYDIWFDYIRLEESV 353
K R YE + + + +IW + E ++
Sbjct: 522 -KARELYEKYLILSRYDVNIWINQALFESTI 551
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 119/249 (47%), Gaps = 18/249 (7%)
Query: 82 DLIRRVRWNTG-VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF 140
D+I ++ G +WI YA++E Q + +AR + +L + ++ Y +E++ K
Sbjct: 388 DIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLGKSPKPK-VFKYYINLEIRLKE 446
Query: 141 INHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMH-----WMPDQQGW 195
+ R ++++ + P Q W Y +EE LG+ +R I++ M DQ
Sbjct: 447 FDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRGIYDISMSNNVGLSESDQLIV 506
Query: 196 LS-YIKFELRYNEVERARQIYERF-VQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVE 253
+ YI FE E E+AR++YE++ + V+ WI A FE + + Y+++ +
Sbjct: 507 IQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQALFESTIP-TETQLIAYQQSHQ 565
Query: 254 KLADDEEAEQLFVAFAEFEERCKETERARCIYKFAL----DHIPKGRAEDLYRKFVAFEK 309
D++ E+ F FE + R I++ A+ +H + + + + + +EK
Sbjct: 566 DGNFDDDGEEEF----SFEITPENKHHTRAIFEKAISYFKEHNEDKKRQQVLQSLLEYEK 621
Query: 310 QYGDREGIE 318
+G++E +E
Sbjct: 622 VHGNQETLE 630
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 252 bits (643), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 214/370 (57%), Gaps = 13/370 (3%)
Query: 33 TPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTG 92
T ++AEQILR+ ++ + I D EL +Y+ RKR E+E ++R R + G
Sbjct: 7 TAVDTHVSAEQILRDVYKKGQKARGSTNIDILDLEELREYQRRKRTEYEGYLKRNRLDMG 66
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
WI+YA++E Q D RARS++ERAL VD LW++Y + E+K K INHARN+ +RA+
Sbjct: 67 QWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAI 126
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERAR 212
+ LPRVD+LWYKY+ +EE L NV R ++ +W P W S++ FE+R R
Sbjct: 127 STLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNAWNSFVDFEIRQKNWNGVR 186
Query: 213 QIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLAD--------DEEAEQL 264
+IY ++V HP++ TW+K+ +FE + G + R+VY A++ +A+ D E +L
Sbjct: 187 EIYSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKL 246
Query: 265 FVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGK 324
+FA +E +E ER+ +Y+ A++ P + L + FEKQ+GD IE+ I K
Sbjct: 247 VNSFAHWEAAQQEYERSSALYQIAIEKWPSNQL--LKAGLLDFEKQFGDINSIEETISYK 304
Query: 325 RRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKR--YWQRY 382
R+ +YE + N +YD W+ Y+ L K+ + +E+AI + P E + W+RY
Sbjct: 305 RKMEYETILSNNAYDYDTWWLYLDLISESFPKQ-IMQTFEKAIVDSRPKELSKNVQWKRY 363
Query: 383 IYLWINYALY 392
IYLW+ Y Y
Sbjct: 364 IYLWMRYICY 373
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 195 WLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEK 254
WL Y KF +R+++V +AR+I + + PK T+ Y + E+K+ E DR R +YE+ +E
Sbjct: 407 WLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIEF 466
Query: 255 LADDEEAEQLFVAFAEFEERCKETERARCIYKFALDH----IPKGRAEDLYRKFVAFEKQ 310
D Q++ + E EE + +R R IY ALD + K L +K++ FE +
Sbjct: 467 QPSD---LQIWSQYGELEENLGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFETE 523
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 159 DQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERF 218
++W Y +V AR+I + + P + + YI+ E++ E +R R+IYE+F
Sbjct: 404 SKIWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKF 463
Query: 219 VQCHPK-VSTWIKYAKFEMKMGEVDRARNVYERAVEKLAD---DEEAEQLFVAFAEFEER 274
++ P + W +Y + E +G+ DR R +Y A+++ +D E L + FE
Sbjct: 464 IEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFETE 523
Query: 275 CKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAI---VGKRRFQYED 331
+E E+AR LYR+++ QY + IE A+ Q D
Sbjct: 524 SQEFEKAR----------------KLYRRYLEL-NQYSPQSWIEFAMYQTSTPTEQQLLD 566
Query: 332 EVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKR 377
+ N D + I E + NK AR+V+E AI ++K+
Sbjct: 567 LAKLQSENVD---EDIEFEITDENKLEARKVFEEAIVFFKEKDDKQ 609
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 91 TGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDR 150
+ +W+ YAK+ D +AR + +A+ + + T + Y E+E+K K + R ++++
Sbjct: 404 SKIWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKT-FKGYIELEVKLKEFDRVRKIYEK 462
Query: 151 AVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLS----------YIK 200
+ P Q+W +Y +EE LG+ R I+ + + +L+ YI
Sbjct: 463 FIEFQPSDLQIWSQYGELEENLGDWDRVRGIY---TIALDENSDFLTKEAKIVLLQKYIT 519
Query: 201 FELRYNEVERARQIYERFVQCHP-KVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDE 259
FE E E+AR++Y R+++ + +WI++A ++ + ++ + E + +D
Sbjct: 520 FETESQEFEKARKLYRRYLELNQYSPQSWIEFAMYQTSTPTEQQLLDLAKLQSENVDEDI 579
Query: 260 EAE 262
E E
Sbjct: 580 EFE 582
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3
SV=1
Length = 683
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 206/352 (58%), Gaps = 9/352 (2%)
Query: 63 ITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDY 122
I D EL D++ RKR EFE+ ++R R + W++YA +E Q+D RARSV+ERAL V
Sbjct: 32 ILDVEELRDWQRRKRSEFEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAP 91
Query: 123 RNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIF 182
+ +WL+Y + E++ + +NHARN+ RA LLPRVD+LWYKY+ MEE LG V R ++
Sbjct: 92 GDVVVWLRYVDCELRARDVNHARNLLVRATALLPRVDKLWYKYVLMEESLGQVELVRGVY 151
Query: 183 ERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVD 242
+W P W +++ FE R +VE R++Y R+V HP +TW+K+ FE K G+
Sbjct: 152 TKWCTLEPAAAAWDAFVDFETRQGQVEHVREVYSRYVMVHPVAATWLKWVAFERKHGDAG 211
Query: 243 RARNVYERAVEKL-----ADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRA 297
R VY A + L AD E EQL V+FAE+E +E ER+R + A+ P+ +
Sbjct: 212 TVRRVYSLACDTLTAFAGADVHEVEQLVVSFAEWEATQQELERSRAVLSVAVSRWPE--S 269
Query: 298 EDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKE 357
L EK++G E +I+ KR+ +YE+++ +P++YD W+ Y+ L E E
Sbjct: 270 STLKDATAQLEKKFGGARAGE-SILFKRKREYEEQLLAHPLDYDAWWLYLDLLEESFPAE 328
Query: 358 RAREVYERAIANVPPAEEKRY-WQRYIYLWINYALYEELDAGDMERTRDVYQ 408
+ E + VP ++EK W++Y+ LW+ Y L+ E D + TR +YQ
Sbjct: 329 LRAALAEATVKAVPRSQEKDMQWRKYVNLWLRYLLFLETVLVDSDLTRSMYQ 380
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 52/351 (14%)
Query: 91 TGVWIKYAKWEESQKDFNRARSVWERALEV--------DYRNHTLWLKYAEVEMKNKFIN 142
W+K+ +E D R V+ A + + L + +AE E + +
Sbjct: 194 AATWLKWVAFERKHGDAGTVRRVYSLACDTLTAFAGADVHEVEQLVVSFAEWEATQQELE 253
Query: 143 HARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNV-AGARQIFER-------WMHWMPDQQG 194
+R V AV+ P L +E+ G AG +F+R + D
Sbjct: 254 RSRAVLSVAVSRWPESSTLKDATAQLEKKFGGARAGESILFKRKREYEEQLLAHPLDYDA 313
Query: 195 WLSYIKF-----------ELRYNEVERARQIYERFVQCHPKVSTWIKYAKF-EMKMGEVD 242
W Y+ L V+ + E+ +Q V+ W++Y F E + + D
Sbjct: 314 WWLYLDLLEESFPAELRAALAEATVKAVPRSQEKDMQWRKYVNLWLRYLLFLETVLVDSD 373
Query: 243 RARNVYERAVEKLADDEEAE--QLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDL 300
R++Y++ V ++ + + + ++ +AEFE R ++ ++AR I +L PK + L
Sbjct: 374 LTRSMYQKLVREVIPNTKFTFAKAWIMYAEFEIRQEKLDKARKILGMSLGMCPKPK---L 430
Query: 301 YRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAR 360
++ ++ E + + + + + ++ +++ +V N W +Y LEE++G+++RAR
Sbjct: 431 FQYYIDLEIKLKEFDRVRR--LHEKLLEFQPDVLSN------WIEYAELEENLGDEDRAR 482
Query: 361 EVYERAI---ANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
+YE + + A + + QRYI E DA + ER R +Y
Sbjct: 483 GIYEIGLTADGGLSQARQLQLMQRYIQF--------ETDASEFERARALYS 525
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 161 LWYKYI-HMEEMLGNVAGARQIFERWM-HWMPDQQ-----GWLSYIKFELRYNEVERARQ 213
LW +Y+ +E +L + R ++++ + +P+ + W+ Y +FE+R ++++AR+
Sbjct: 357 LWLRYLLFLETVLVDSDLTRSMYQKLVREVIPNTKFTFAKAWIMYAEFEIRQEKLDKARK 416
Query: 214 IYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEE 273
I + PK + Y E+K+ E DR R ++E+ +E D ++ +AE EE
Sbjct: 417 ILGMSLGMCPKPKLFQYYIDLEIKLKEFDRVRRLHEKLLEFQPD---VLSNWIEYAELEE 473
Query: 274 RCKETERARCIYKFAL---DHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYE 330
+ +RAR IY+ L + + R L ++++ FE + E + R Y
Sbjct: 474 NLGDEDRARGIYEIGLTADGGLSQARQLQLMQRYIQFETDASEFE--------RARALYS 525
Query: 331 DEVRKNPMNYDIWFDYIRLEESV 353
V + + ++W E SV
Sbjct: 526 RYVALSGYDPNVWISCALYESSV 548
>sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1
PE=3 SV=1
Length = 695
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 206/377 (54%), Gaps = 14/377 (3%)
Query: 34 PAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGV 93
PA QIT IL++ + Q + I D EL D + RKR EFE ++R R +
Sbjct: 5 PAK-QITDNDILKDVYKSQNKQFSIDAIDILDLEELKDVQRRKRTEFEGYLKRNRLDVKQ 63
Query: 94 WIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVT 153
W++YA +E Q D RARS++ERAL V LW++Y E E+K +INHARN+ +RA+T
Sbjct: 64 WMRYAVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLGYINHARNILERAIT 123
Query: 154 LLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQ 213
LPRVD+LWYKY+ +EE L + R +F++W P W S+ FE+R E R
Sbjct: 124 KLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEPAAHVWDSFTDFEVRQERYEDVRN 183
Query: 214 IYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAE--------QLF 265
IY ++V HP+ STW K+ FE++ G R+VY A++ L E+ L
Sbjct: 184 IYSKYVLIHPQFSTWRKWINFEVRYGSTKTVRSVYSLALDALIAYSESRNELVDDCINLI 243
Query: 266 VAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKR 325
V F+++E KE R++ + + A+ PK L + FE+++G E +E+ I+ R
Sbjct: 244 VEFSKWEALQKEYIRSKSLLEIAIQKWPKSNT--LNNALLQFEREHGTAETLENTIILNR 301
Query: 326 RFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAI-ANVPPAEEK-RYWQRYI 383
+ YED + + +YD W Y++L E+ + E + + A +P + K +YW++YI
Sbjct: 302 KKHYEDILNEKVYDYDTWLLYLQLLEN-NYPKLVMEAFSNVLNAAIPTSRTKDKYWKQYI 360
Query: 384 YLWINYALYEELDAGDM 400
+WI Y + EL D+
Sbjct: 361 LIWIKYLTFLELTINDI 377
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 225 VSTWIKYAKF-EMKMGEVDRARNVYERAVEKLA--DDEEAEQLFVAFAEFEERCKETERA 281
+ WIKY F E+ + ++ +E + + DD ++++ +AEFE R E+A
Sbjct: 360 ILIWIKYLTFLELTINDIPLCGQKFEELIHNIIPNDDFTFSKIWILYAEFEIRQDNLEKA 419
Query: 282 RCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYD 341
R I +L PK + ++ ++ E + + + + R YE+ ++ +P+N D
Sbjct: 420 RSILGRSLGLCPKRKT---FKYYIDLETKLREFDRV--------RILYENFLKFDPLNLD 468
Query: 342 IWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYAL-YEELD 396
W Y+ E+S+G++ R R V I N K + + + I+Y + Y+ D
Sbjct: 469 TWRAYVEFEDSLGDEVRVRSVCMIPIQNNIGLFSKSFQLHLLEILIDYEMEYQNFD 524
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 134/332 (40%), Gaps = 74/332 (22%)
Query: 92 GVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTL------------------------ 127
+ ++++KWE QK++ R++S+ E A++ +++TL
Sbjct: 241 NLIVEFSKWEALQKEYIRSKSLLEIAIQKWPKSNTLNNALLQFEREHGTAETLENTIILN 300
Query: 128 ------------------WLKYAEVEMKN--KFINHA-RNVWDRAVTLLPRVDQLWYKYI 166
WL Y ++ N K + A NV + A+ D+ W +YI
Sbjct: 301 RKKHYEDILNEKVYDYDTWLLYLQLLENNYPKLVMEAFSNVLNAAIPTSRTKDKYWKQYI 360
Query: 167 --------HMEEMLGNVAGARQIFERWMH-WMPD-----QQGWLSYIKFELRYNEVERAR 212
+E + ++ Q FE +H +P+ + W+ Y +FE+R + +E+AR
Sbjct: 361 LIWIKYLTFLELTINDIPLCGQKFEELIHNIIPNDDFTFSKIWILYAEFEIRQDNLEKAR 420
Query: 213 QIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFE 272
I R + PK T+ Y E K+ E DR R +YE L D + A+ EFE
Sbjct: 421 SILGRSLGLCPKRKTFKYYIDLETKLREFDRVRILYENF---LKFDPLNLDTWRAYVEFE 477
Query: 273 ERCKETERARCIYKFALDH----IPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQ 328
+ + R R + + + K L + +E +Y + + IE +
Sbjct: 478 DSLGDEVRVRSVCMIPIQNNIGLFSKSFQLHLLEILIDYEMEYQNFDNIEPLL------- 530
Query: 329 YEDEVRKNPMNYDIWFDYIRLEESVGNKERAR 360
+ +V + + W DY + +V +E+ +
Sbjct: 531 -KKQVELSNFTVEAWTDYAMKKLTVPTEEQVQ 561
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 25/256 (9%)
Query: 78 KEFEDLIRRVRWN-----TGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYA 132
++FE+LI + N + +WI YA++E Q + +ARS+ R+L + + T + Y
Sbjct: 382 QKFEELIHNIIPNDDFTFSKIWILYAEFEIRQDNLEKARSILGRSLGLCPKRKT-FKYYI 440
Query: 133 EVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQ 192
++E K + + R +++ + P W Y+ E+ LG+ R + M + +
Sbjct: 441 DLETKLREFDRVRILYENFLKFDPLNLDTWRAYVEFEDSLGDEVRVRSV---CMIPIQNN 497
Query: 193 QGWLS----------YIKFELRYNEVERARQIYERFVQCHP-KVSTWIKYAKFEMKMGEV 241
G S I +E+ Y + + ++ V+ V W YA ++ +
Sbjct: 498 IGLFSKSFQLHLLEILIDYEMEYQNFDNIEPLLKKQVELSNFTVEAWTDYAMKKLTVPTE 557
Query: 242 DRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPK-GRAED- 299
++ +N E+L D A EFE + AR +++ AL++ + R ED
Sbjct: 558 EQVQNFQIMKEERLK-DSSALDEQEIEFEFEITDNNKDNARDVFERALNYFKEIKRDEDR 616
Query: 300 --LYRKFVAFEKQYGD 313
+ + +V FE QYGD
Sbjct: 617 ARILQSYVDFEGQYGD 632
>sp|A1A5S1|PRP6_RAT Pre-mRNA-processing factor 6 OS=Rattus norvegicus GN=Prpf6 PE=2
SV=1
Length = 941
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 125/294 (42%), Gaps = 16/294 (5%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W++ A + AR+++ AL+V ++WL+ A E + + RAV
Sbjct: 542 TWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAV 601
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPD-QQGWLSYIKFELRYNEVERA 211
P+ + LW + + G+V AR I P+ ++ WL+ +K E NE ERA
Sbjct: 602 AHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERA 661
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
R++ + P ++K K E +G + A+ + E A+ E+ +L++ +
Sbjct: 662 RRLLAKARSSAPTARVFMKSVKLEWVLGNITAAQELCEEALRHY---EDFPKLWMMKGQI 718
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYED 331
EE+ + ERAR Y L P + L+ E++ G + + R E
Sbjct: 719 EEQGELMERAREAYNQGLKKCP--HSTPLWLLLSRLEEKIGQ--------LTRARAILEK 768
Query: 332 EVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
KNP N +W + +RLE G K A + +A+ P W ++L
Sbjct: 769 SRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSEAVFL 820
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
WI A+ EE AR++ + E+ ++ +WL+ A ++ + A+ V +AV
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDT----AKAVVAQAV 366
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQ-QGWLSYIKFELRYNEVERA 211
LP+ ++ YI E+ ++ +++ + + +P+ + W + ++ E E E A
Sbjct: 367 RHLPQSVRI---YIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELE----EPEDA 419
Query: 212 RQIYERFVQCHP-KVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAE 270
R + R V+C P V W+ A+ E + AR V +A E + D +++ A+
Sbjct: 420 RIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTD---RHIWITAAK 472
Query: 271 FEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREG-------IEDAIVG 323
EE T+ I A+ + + ++ R+ + + DR G + A++G
Sbjct: 473 LEEANGNTQMVEKIIDRAITSL-RANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIG 531
Query: 324 KRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYI 383
E+E RK+ W + + E AR +Y A+ P +K W R
Sbjct: 532 ---IGIEEEDRKH-----TWMEDADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAA 581
Query: 384 YLWINYALYEELDA 397
Y N+ E L+A
Sbjct: 582 YFEKNHGTRESLEA 595
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 60 KQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE 119
K +I + EL + R R+ + +++ +T +W+ ++ EE RAR++ E++
Sbjct: 715 KGQIEEQGELME---RAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRL 771
Query: 120 VDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGAR 179
+ +N LWL+ +E + N A + +A+ P LW + + +E +
Sbjct: 772 KNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSV 831
Query: 180 QIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVS-TWIKYAKFEMKM 238
++ H D L+ K ++ +AR+ + R V+ + W + KFE++
Sbjct: 832 DALKKCEH---DPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQH 888
Query: 239 GEVDRARNVYERA 251
G ++ V +R
Sbjct: 889 GTEEQQEEVRKRC 901
>sp|Q91YR7|PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=2 SV=1
Length = 941
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 125/294 (42%), Gaps = 16/294 (5%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W++ A + AR+++ AL+V ++WL+ A E + + RAV
Sbjct: 542 TWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAV 601
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPD-QQGWLSYIKFELRYNEVERA 211
P+ + LW + + G+V AR I P+ ++ WL+ +K E NE ERA
Sbjct: 602 AHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERA 661
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
R++ + P ++K K E +G + A+ + E E L E+ +L++ +
Sbjct: 662 RRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQELCE---EALRHYEDFPKLWMMKGQI 718
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYED 331
EE+ + E+AR Y L P + L+ E++ G + + R E
Sbjct: 719 EEQGELMEKAREAYNQGLKKCP--HSTPLWLLLSRLEEKIGQ--------LTRARAILEK 768
Query: 332 EVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
KNP N +W + +RLE G K A + +A+ P W ++L
Sbjct: 769 SRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSEAVFL 820
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
WI A+ EE AR++ + E+ ++ +WL+ A ++ + A+ V +AV
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDT----AKAVVAQAV 366
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQ-QGWLSYIKFELRYNEVERA 211
LP+ ++ YI E+ ++ +++ + + +P+ + W + ++ E E E A
Sbjct: 367 RHLPQSVRI---YIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELE----EPEDA 419
Query: 212 RQIYERFVQCHP-KVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAE 270
R + R V+C P V W+ A+ E + AR V +A E + D +++ A+
Sbjct: 420 RIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTD---RHIWITAAK 472
Query: 271 FEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREG-------IEDAIVG 323
EE T+ I A+ + + ++ R+ + + DR G + A++G
Sbjct: 473 LEEANGNTQMVEKIIDRAITSL-RANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIG 531
Query: 324 KRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYI 383
E+E RK+ W + + E AR +Y A+ P +K W R
Sbjct: 532 ---IGIEEEDRKH-----TWMEDADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAA 581
Query: 384 YLWINYALYEELDA 397
Y N+ E L+A
Sbjct: 582 YFEKNHGTRESLEA 595
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 60 KQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE 119
K +I + EL + + R+ + +++ +T +W+ ++ EE RAR++ E++
Sbjct: 715 KGQIEEQGELME---KAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRL 771
Query: 120 VDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGAR 179
+ +N LWL+ +E + N A + +A+ P LW + + +E +
Sbjct: 772 KNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSV 831
Query: 180 QIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVS-TWIKYAKFEMKM 238
++ H D L+ K ++ +AR+ + R V+ + W + KFE++
Sbjct: 832 DALKKCEH---DPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQH 888
Query: 239 GEVDRARNVYERA 251
G ++ V +R
Sbjct: 889 GTEEQQEEVRKRC 901
>sp|Q2KJJ0|PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bos taurus GN=PRPF6 PE=2 SV=1
Length = 941
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 16/294 (5%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W++ A + AR+++ AL+V ++WL+ A E + + RAV
Sbjct: 542 TWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAV 601
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPD-QQGWLSYIKFELRYNEVERA 211
P+ + LW + + G+V AR I P+ ++ WL+ +K E NE ERA
Sbjct: 602 AHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERA 661
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
R++ + P ++K K E +G + A+ + E A++ E+ +L++ +
Sbjct: 662 RRLLAKARSSAPTARVFMKSVKLEWVLGNLVAAQELCEEALKHY---EDFPKLWMMKGQI 718
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYED 331
EE+ + E+AR Y L P + L+ E++ G + + R E
Sbjct: 719 EEQEELVEKAREAYNQGLKKCP--HSTPLWLLLSRLEEKVGQ--------LTRARAILEK 768
Query: 332 EVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
KNP N +W + +RLE G K A + +A+ P W I+L
Sbjct: 769 SRLKNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECP--NSGVLWSEAIFL 820
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
WI A+ EE AR++ + E+ ++ +WL+ A ++ + A+ V +AV
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDT----AKAVVAQAV 366
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQ-QGWLSYIKFELRYNEVERA 211
LP+ ++ YI E+ ++ +++ + + +P+ + W + ++ E E E A
Sbjct: 367 RHLPQSVRI---YIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELE----EPEDA 419
Query: 212 RQIYERFVQCHP-KVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAE 270
R + R V+C P V W+ A+ E + AR V +A E + D +++ A+
Sbjct: 420 RIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTD---RHIWITAAK 472
Query: 271 FEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREG-------IEDAIVG 323
EE T+ I A+ + + ++ R+ + + D+ G + A++G
Sbjct: 473 LEEANGNTQMVEKIIDRAITSL-RANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIG 531
Query: 324 KRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYI 383
E+E RK+ W + + E AR +Y A+ P +K W R
Sbjct: 532 ---IGIEEEDRKH-----TWMEDADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAA 581
Query: 384 YLWINYALYEELDA 397
Y N+ E L+A
Sbjct: 582 YFEKNHGTRESLEA 595
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 7/181 (3%)
Query: 60 KQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE 119
K +I + EL + + R+ + +++ +T +W+ ++ EE RAR++ E++
Sbjct: 715 KGQIEEQEELVE---KAREAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRL 771
Query: 120 VDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGAR 179
+ +N LWL+ +E + N A + +A+ P LW + I +E +
Sbjct: 772 KNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECPNSGVLWSEAIFLEARPQRKTKSV 831
Query: 180 QIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVS-TWIKYAKFEMKM 238
++ H D L+ K ++ +AR+ + R V+ + W + KFE++
Sbjct: 832 DALKKCEH---DPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQH 888
Query: 239 G 239
G
Sbjct: 889 G 889
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 82/218 (37%), Gaps = 25/218 (11%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
V++K K E + A+ + E AL+ LW+ ++E + + + AR +++ +
Sbjct: 677 VFMKSVKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGL 736
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG-WLSYIKFELRYNEVERA 211
P LW +EE +G + AR I E+ P G WL ++ E R A
Sbjct: 737 KKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIA 796
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
+ + +Q P A F ++ ++V+ L E + +A A+
Sbjct: 797 STLMAKALQECPNSGVLWSEAIF------LEARPQRKTKSVDALKKCEHDPHVLLAVAKL 850
Query: 272 EERCKETERAR------------------CIYKFALDH 291
++ +AR YKF L H
Sbjct: 851 FWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQH 888
>sp|O94906|PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1
Length = 941
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 16/294 (5%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W++ A + AR+++ AL+V ++WL+ A E + + RAV
Sbjct: 542 TWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAV 601
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPD-QQGWLSYIKFELRYNEVERA 211
P+ + LW + + G+V AR I P+ ++ WL+ +K E +E ERA
Sbjct: 602 AHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERA 661
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
R++ + P ++K K E + A+++ E A+ E+ +L++ +
Sbjct: 662 RRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHY---EDFPKLWMMKGQI 718
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYED 331
EE+ + E+AR Y L P + L+ E++ G + + R E
Sbjct: 719 EEQKEMMEKAREAYNQGLKKCP--HSTPLWLLLSRLEEKIGQ--------LTRARAILEK 768
Query: 332 EVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
KNP N +W + +RLE G K A + +A+ P W I+L
Sbjct: 769 SRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSEAIFL 820
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
WI A+ EE AR++ + E+ ++ +WL+ A ++ + A+ V +AV
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDT----AKAVVAQAV 366
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQ-QGWLSYIKFELRYNEVERA 211
LP+ ++ YI E+ ++ +++ + + +P+ + W + ++ E E E A
Sbjct: 367 RHLPQSVRI---YIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELE----EPEDA 419
Query: 212 RQIYERFVQCHP-KVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAE 270
R + R V+C P V W+ A+ E + AR V +A E + D +++ A+
Sbjct: 420 RIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTD---RHIWITAAK 472
Query: 271 FEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREG-------IEDAIVG 323
EE T+ I A+ + + ++ R+ + + DR G + A++G
Sbjct: 473 LEEANGNTQMVEKIIDRAITSL-RANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIG 531
Query: 324 KRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYI 383
E+E RK+ W + + E AR +Y A+ P +K W R
Sbjct: 532 ---IGIEEEDRKH-----TWMEDADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAA 581
Query: 384 YLWINYALYEELDA 397
Y N+ E L+A
Sbjct: 582 YFEKNHGTRESLEA 595
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEV 134
+ R+ + +++ +T +W+ ++ EE RAR++ E++ + +N LWL+ +
Sbjct: 727 KAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRL 786
Query: 135 EMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG 194
E + N A + +A+ P LW + I +E + ++ H D
Sbjct: 787 EYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEH---DPHV 843
Query: 195 WLSYIKFELRYNEVERARQIYERFVQCHPKVS-TWIKYAKFEMKMGEVDRARNVYERA 251
L+ K ++ +AR+ + R V+ + W + KFE++ G ++ V +R
Sbjct: 844 LLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRC 901
Score = 38.5 bits (88), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W+ + EE ++ +AR + + L+ + LWL + +E K + AR + +++
Sbjct: 711 LWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSR 770
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQ-GWLSYIKFELRYNEVERA 211
P+ LW + + +E G A + + + P+ W I E R +R
Sbjct: 771 LKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEAR---PQRR 827
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
+ + +C + AK ++ +AR + R V+ +D +A F
Sbjct: 828 TKSVDALKKCEHDPHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFF------ 881
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGD 313
YKF L H + + E++ ++ + E ++G+
Sbjct: 882 -------------YKFELQHGTEEQQEEVRKRCESAEPRHGE 910
>sp|Q5RCC2|PRP6_PONAB Pre-mRNA-processing factor 6 OS=Pongo abelii GN=PRPF6 PE=2 SV=1
Length = 941
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 16/294 (5%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W++ A + AR+++ AL+V ++WL+ A + + RAV
Sbjct: 542 TWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFGKNHGTRESLEALLQRAV 601
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPD-QQGWLSYIKFELRYNEVERA 211
P+ + LW + + G+V AR I P+ ++ WL+ +K E +E ERA
Sbjct: 602 AHCPKAEVLWLMGAKSKWLTGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERA 661
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
R++ + P ++K K E + A+++ E A+ E+ +L++ +
Sbjct: 662 RRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHY---EDFPKLWMMKGQI 718
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYED 331
EE+ + E+AR Y L P + L+ E++ G + + R E
Sbjct: 719 EEQKEMMEKAREAYNQGLKKCP--HSTPLWLLLSRLEEKIGQ--------LTRTRAILEK 768
Query: 332 EVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
KNP N +W + +RLE G K A + +A+ P W I+L
Sbjct: 769 SRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSEAIFL 820
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
WI A+ EE AR++ + E+ ++ +WL+ A ++ + A+ V +AV
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDT----AKAVVAQAV 366
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQ-QGWLSYIKFELRYNEVERA 211
LP+ ++ YI E+ ++ +++ + + +P+ + W + ++ E E E A
Sbjct: 367 RHLPQFVRI---YIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELE----EPEDA 419
Query: 212 RQIYERFVQCHP-KVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAE 270
R + R V+C P V W+ A+ E + AR V +A E + D +++ A+
Sbjct: 420 RIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTD---RHIWITAAK 472
Query: 271 FEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREG-------IEDAIVG 323
EE T+ I A+ + + ++ R+ + + DR G + A++G
Sbjct: 473 LEEANGNTQMVEKIIDRAITSL-RANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIG 531
Query: 324 KRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYI 383
E+E RK+ W + + E AR +Y A+ P +K W R
Sbjct: 532 ---IGIEEEDRKH-----TWMEDADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAA 581
Query: 384 YLWINYALYEELDA 397
Y N+ E L+A
Sbjct: 582 YFGKNHGTRESLEA 595
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEV 134
+ R+ + +++ +T +W+ ++ EE R R++ E++ + +N LWL+ +
Sbjct: 727 KAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRTRAILEKSRLKNPKNPGLWLESVRL 786
Query: 135 EMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG 194
E + N A + +A+ P LW + I +E + ++ H D
Sbjct: 787 EYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEH---DPHV 843
Query: 195 WLSYIKFELRYNEVERARQIYERFVQCHPKVS-TWIKYAKFEMKMGEVDRARNVYERA 251
L+ K ++ +AR+ + R V+ + W + KFE++ G +R V +R
Sbjct: 844 LLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEERQEEVRKRC 901
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 25/240 (10%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
V++K K E Q + A+ + E AL LW+ ++E + + + AR +++ +
Sbjct: 677 VFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGL 736
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG-WLSYIKFELRYNEVERA 211
P LW +EE +G + R I E+ P G WL ++ E R A
Sbjct: 737 KKCPHSTPLWLLLSRLEEKIGQLTRTRAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIA 796
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
+ + +Q P A F ++ ++V+ L E + +A A+
Sbjct: 797 NTLMAKALQECPNSGILWSEAIF------LEARPQRRTKSVDALKKCEHDPHVLLAVAKL 850
Query: 272 EERCKETERAR------------------CIYKFALDHIPKGRAEDLYRKFVAFEKQYGD 313
++ +AR YKF L H + R E++ ++ + E ++G+
Sbjct: 851 FWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEERQEEVRKRCESAEPRHGE 910
>sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2
Length = 855
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 16/271 (5%)
Query: 81 EDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF 140
E + RV + VW A EES F ++V++R L++ + + YA ++K+
Sbjct: 474 EPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKY 533
Query: 141 INHARNVWDRAVTLL--PRVDQLWYKYIHMEEMLGNVAG-----ARQIFERWMHWMPDQQ 193
+ ++R ++L P V +W Y + + + G AR +FE+ + P +
Sbjct: 534 FEESFKAYERGISLFKWPNVSDIWSTY--LTKFIARYGGRKLERARDLFEQALDGCPPKY 591
Query: 194 G---WLSYIKFELRYNEVERARQIYE---RFVQCHPKVSTWIKYAKFEMKMGEVDRARNV 247
+L Y + E + A +YE R V+ + + Y K ++ V R +
Sbjct: 592 AKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGI 651
Query: 248 YERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
Y++A+E L+ DE A ++ + FA+ E + E +RAR IY F ++ + F
Sbjct: 652 YQKAIEVLS-DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDF 710
Query: 308 EKQYGDREGIEDAIVGKRRFQYEDEVRKNPM 338
E ++G+ + I++ + +R Q + N M
Sbjct: 711 EVRHGNEDTIKEMLRIRRSVQATYNTQVNFM 741
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 140/316 (44%), Gaps = 35/316 (11%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRN----HTLWLKYAEVEMKNKFINHARNVW 148
+W+ +AK+ E + AR + E+A +V+++ ++W + E+E++++ + A +
Sbjct: 397 LWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLL 456
Query: 149 DRAVTLLPR-----------------VDQLWYKYIHMEEMLGNVAGARQIFERWMHW-MP 190
+A L R ++W +EE LG + +++R + +
Sbjct: 457 RKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIA 516
Query: 191 DQQGWLSYIKFELRYNEVERARQIYERFVQCH--PKVS-TWIKY-AKFEMKMG--EVDRA 244
Q ++Y F + E + + YER + P VS W Y KF + G +++RA
Sbjct: 517 TPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERA 576
Query: 245 RNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKF 304
R+++E+A++ + A+ L++ +A+ EE A +Y+ A + + D++ +
Sbjct: 577 RDLFEQALDG-CPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIY 635
Query: 305 VAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYE 364
+ K+ + G+ + +Q EV + ++ + +E +G +RAR +Y
Sbjct: 636 I---KRAAEIYGVTHT---RGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYS 689
Query: 365 RAIANVPPAEEKRYWQ 380
P +WQ
Sbjct: 690 FCSQICDPRTTGAFWQ 705
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 155/395 (39%), Gaps = 88/395 (22%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQ--------KDFNRARSVWERALEVDYRNHT 126
R + +E ++ + + +W +Y K +Q + + ERA ++
Sbjct: 52 RLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPR 111
Query: 127 LWLKYAEVEMKNKFINHARNVWDRAVTLLP--RVDQLWYKYIHMEEMLGNVAGARQIFER 184
LWL Y + M + H R +DRA+ LP + ++W Y+ A + + R
Sbjct: 112 LWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRR 171
Query: 185 WMHWMPDQ-QGWLSYIKFELRYNE-VERARQIY--ERFV-------------------QC 221
++ P+ + ++ Y+K R +E +R + ERFV Q
Sbjct: 172 FLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQN 231
Query: 222 HPKVST---------------------WIKYAKFEMKMGEVDRARNVYERAVEKLADDEE 260
KV + W A + ++ G ++AR+VYE A+ + +
Sbjct: 232 PDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRD 291
Query: 261 AEQLFVAFAEFEER--CKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIE 318
Q+F ++A+FEE + E A + + D + DL + FE+ R +
Sbjct: 292 FTQVFDSYAQFEESMIAAKMETASELGREEEDDV------DLELRLARFEQLISRRPLLL 345
Query: 319 DAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREV---YERAIANVPP--A 373
++++ +R+NP + W + L + R RE+ Y A+ V P A
Sbjct: 346 NSVL----------LRQNPHHVHEWHKRVALHQG-----RPREIINTYTEAVQTVDPFKA 390
Query: 374 EEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
K + LW+ +A + E D G ++ R + +
Sbjct: 391 TGKPH-----TLWVAFAKFYE-DNGQLDDARVILE 419
>sp|Q12381|PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp1 PE=1 SV=1
Length = 906
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 17/294 (5%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
W+ A+ ++K + AR+V+ +L V ++ LWL+ E+E ++ ++AV
Sbjct: 512 TWLDDAQSFIARKCIDCARAVFAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAV 571
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPD-QQGWLSYIKFELRYNEVERA 211
P+ + LW Y + + ++AGAR I R + + ++ WL+ ++ E NE ERA
Sbjct: 572 ESCPKAEILWLLYAKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERA 631
Query: 212 RQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
R++ R W K E + E DRA + E A++ ++L++ +
Sbjct: 632 RKLLARARIESGTERIWTKSISLERILDEKDRALQLLENALKIYP---HYDKLYMMKGQI 688
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYED 331
E ++ E AR Y P + L+ E++ V + R ++
Sbjct: 689 FEDKEQIELARDAYLAGTKVCP--YSIPLWLLLAKLEEKQS---------VIRARVVFDR 737
Query: 332 EVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYL 385
KNP N +W + I++E GN + R +A+ P + W I+L
Sbjct: 738 AKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECPSS--GLLWTEAIWL 789
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 148/374 (39%), Gaps = 56/374 (14%)
Query: 65 DSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRN 124
++ +L D R + RK + +I + W+ A+ EE ++A+S+ + E R+
Sbjct: 253 NANDLGDIR-KARKLLQSVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRS 311
Query: 125 HTLWLKY--------AEVEMKNKF-------------------INHARNVWDRAVTLLPR 157
+WL+ A+V + N H + + +A+ P
Sbjct: 312 EDVWLEAIRLHPAAEAKVIIANAVKKLPKSVTLWLEAEKLENQAQHKKRIIKKALEFNPT 371
Query: 158 VDQLWYKYIHMEEMLGNVAGARQIFERWMHWMP-DQQGWLSYIKFELRYNEVERARQIYE 216
LW + +++EE + N AR + R + +P WL+ + E N + + +
Sbjct: 372 SVSLWKEAVNLEEEVDN---ARILLARAVELIPMSIDLWLALARLETYENAKKVLNKARQ 428
Query: 217 RFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCK 276
H WI A+ E + G V R + R V +L Q +E E+C
Sbjct: 429 TIRTSH---EVWIAAARLEEQQGNVSRVEKIMARGVSELQATGGMLQRDQWLSE-AEKC- 483
Query: 277 ETERARCIYKFALDHIPKGRA---EDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEV 333
ETE A I A+ + G ED + ++ + + R+ I+ A R + +
Sbjct: 484 ETEGA-VITAQAIINTCLGVGLDEEDQFDTWLDDAQSFIARKCIDCA-----RAVFAFSL 537
Query: 334 RKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYE 393
R P + +W + LE+ G E + E+A+ + P AE LW+ YA E
Sbjct: 538 RVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAE---------ILWLLYA-KE 587
Query: 394 ELDAGDMERTRDVY 407
+ D+ R++
Sbjct: 588 RKNVNDIAGARNIL 601
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 29/294 (9%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W+ YAK ++ D AR++ RA E + + +WL +E N AR + RA
Sbjct: 580 LWLLYAKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARA- 638
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMP--DQQGWLSYIKFELRYNEVER 210
+ +++W K I +E +L A Q+ E + P D+ + FE + ++E
Sbjct: 639 RIESGTERIWTKSISLERILDEKDRALQLLENALKIYPHYDKLYMMKGQIFEDK-EQIEL 697
Query: 211 ARQIYERFVQCHP-KVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFA 269
AR Y + P + W+ AK E K V RAR V++RA K + + E L++
Sbjct: 698 ARDAYLAGTKVCPYSIPLWLLLAKLEEKQS-VIRARVVFDRAKVK---NPKNEFLWLELI 753
Query: 270 EFEERCKETERARCIYKFALDHIPKG------------RAEDLYRKFVAFEKQYGDREGI 317
+ E R + R AL P RA+ R A K G+ +
Sbjct: 754 KMELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQRKTRATDALRKCEGNAHLL 813
Query: 318 EDAI--------VGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVY 363
K R + V+ + N D+W + + GN+++ +EV
Sbjct: 814 CTIARMLWLEKKADKARSWFLKAVKADQDNGDVWCWFYKYSLEAGNEDQQKEVL 867
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 27/285 (9%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W++ + E+ S+ E+A+E + LWL YA+ I ARN+ RA
Sbjct: 546 LWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAF 605
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERAR 212
+++W + +E + AR++ R ++ W I E +E +RA
Sbjct: 606 EYNSNSEEIWLAAVRIEFVNNENERARKLLARARIESGTERIWTKSISLERILDEKDRAL 665
Query: 213 QIYERFVQCHPKVSTWIKYAKFEMKMG-------EVDRARNVYERAVEKLADDEEAEQLF 265
Q+ E ++ +P Y K M G +++ AR+ Y + + L+
Sbjct: 666 QLLENALKIYP------HYDKLYMMKGQIFEDKEQIELARDAYLAGTKVCP---YSIPLW 716
Query: 266 VAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKR 325
+ A+ EE+ + RAR ++ A PK E L+ + + E + G+ + +
Sbjct: 717 LLLAKLEEK-QSVIRARVVFDRAKVKNPKN--EFLWLELIKMELRAGN--------ISQV 765
Query: 326 RFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANV 370
R +++ P + +W + I LE K RA + + N
Sbjct: 766 RAALAKALQECPSSGLLWTEAIWLEPRAQRKTRATDALRKCEGNA 810
>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3
Length = 1871
Score = 75.5 bits (184), Expect = 8e-13, Method: Composition-based stats.
Identities = 79/356 (22%), Positives = 146/356 (41%), Gaps = 39/356 (10%)
Query: 46 REARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGV---------WIK 96
RE +E E PK+K T E RL+ F WN G+ +
Sbjct: 1505 REGKEEAEETNVLPKEKQTKPAEAP--RLQLSSGFA-------WNVGLDSLTPALPPLAE 1555
Query: 97 YAKWEESQKDFNRA--RSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTL 154
+ EE +K +S ER LE L + E M + + +DR V
Sbjct: 1556 SSDSEEDEKPHQATIKKSKKERELEKQKAEKEL-SRIEEALMDPGRQPESADDFDRLVLS 1614
Query: 155 LPRVDQLWYKYIHMEEMLGNVAGARQIFERWMH---WMPDQQG---WLSYIKFELRYNEV 208
P LW +Y+ + AR + ER + + +Q+ W++ + E Y
Sbjct: 1615 SPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQ 1674
Query: 209 ERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAF 268
E +++ER VQ + + ++ A K + A +Y R +++ + + +++ +
Sbjct: 1675 ESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRF---RQEKAVWIKY 1731
Query: 269 AEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQ 328
F R + + + + AL+ +P D+ KF E Q GD E + +
Sbjct: 1732 GAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAE--------RAKAI 1783
Query: 329 YEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAI-ANVPPAEEKRYWQRYI 383
+E+ + P D+W YI + G+++ R+++ER I ++ P K +++RY+
Sbjct: 1784 FENTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFKRYL 1839
Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats.
Identities = 70/316 (22%), Positives = 138/316 (43%), Gaps = 58/316 (18%)
Query: 45 LREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQ 104
L E+ + +E E +P + I S + + L K+K ++L R + + ES
Sbjct: 1553 LAESSDSEEDE-KPHQATIKKSKK--ERELEKQKAEKELSRIEE----ALMDPGRQPESA 1605
Query: 105 KDFNRARSVWERALEVDYRNHT-LWLKYAEVEMKNKFINHARNVWDRAV-TLLPRVDQ-- 160
DF+R L + N + LWL+Y ++ I AR V +RA+ T+ R +Q
Sbjct: 1606 DDFDR--------LVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEK 1657
Query: 161 --LWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERF 218
+W +++E M G+ ++FER + + + +L + + + A ++Y R
Sbjct: 1658 LNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRM 1717
Query: 219 VQ-CHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKE 277
++ + + WIKY F ++ + + V +RA+E L E + + FA+ E + +
Sbjct: 1718 LKRFRQEKAVWIKYGAFLLRRSQAAASHRVLQRALECLPSKEHVD-VIAKFAQLEFQLGD 1776
Query: 278 TERARCIYKFALDHIPK---------------GRAEDL--------------------YR 302
ERA+ I++ L PK G +D+ ++
Sbjct: 1777 AERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFK 1836
Query: 303 KFVAFEKQYGDREGIE 318
+++ +EKQ+G + ++
Sbjct: 1837 RYLDYEKQHGTEKDVQ 1852
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 98/232 (42%), Gaps = 6/232 (2%)
Query: 66 STELADYRLRKRKEFEDL-IRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRN 124
+TE+ R + + + R + VW+ E V+ERA++ +
Sbjct: 1632 ATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYN-EP 1690
Query: 125 HTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFER 184
++L A++ K++ A +++R + + +W KY A + ++ +R
Sbjct: 1691 LKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRSQAAASHRVLQR 1750
Query: 185 WMHWMPDQQGWLSYIKF---ELRYNEVERARQIYERFVQCHPK-VSTWIKYAKFEMKMGE 240
+ +P ++ KF E + + ERA+ I+E + +PK W Y +K G
Sbjct: 1751 ALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGS 1810
Query: 241 VDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHI 292
R+++ER + + + F + ++E++ + + + AL+++
Sbjct: 1811 QKDVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALEYV 1862
Score = 52.4 bits (124), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 38/222 (17%)
Query: 215 YERFVQCHPKVST-WIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQL--FVAFAEF 271
++R V P S W++Y F ++ E+++AR V ERA++ ++ EE E+L +VA
Sbjct: 1608 FDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNL 1667
Query: 272 EERCKETERARCIYKFALDHIPKGRA----EDLYRKFVAFE----------KQYGDREGI 317
E E +++ A+ + + D+Y K F+ K++ + +
Sbjct: 1668 ENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAV 1727
Query: 318 -----------EDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERA 366
A R Q E + + D+ + +LE +G+ ERA+ ++E
Sbjct: 1728 WIKYGAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENT 1787
Query: 367 IANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
++ P + W YI + I + G + RD+++
Sbjct: 1788 LSTYP--KRTDVWSVYIDMTIKH--------GSQKDVRDIFE 1819
>sp|Q4P7S1|SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SYF1 PE=3 SV=1
Length = 1081
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 18/250 (7%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W Y EES D + V+E+ LE+ + + + YA NK+ + V++R V
Sbjct: 735 LWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINYAAFLEDNKYFEESFKVFERGV 794
Query: 153 TLL--PRVDQLWYKYIHMEEMLGNVAG-----ARQIFERWMHWMPD---QQGWLSYIKFE 202
L P ++W +++ + + G AR +FE+ + P + L Y + E
Sbjct: 795 ELFSYPVAFEIW--NVYLSKFVKRYGGAKLERARDLFEQALDKCPARFCKPLMLMYGQLE 852
Query: 203 LRYNEVERARQIYE---RFVQCHPKVSTWIKY-AKFEMKMGEVDRARNVYERAVEKLADD 258
+ V+RA +IYE R V + ++ Y AK G + R +YERA+E L D
Sbjct: 853 EEHGLVKRAMKIYERATRAVSTDDRFDMYVFYIAKAAATFG-LAATRPIYERAIESLPDR 911
Query: 259 EEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIE 318
+ AE + + FA E + E +RAR IY A D ++++ FE + G +
Sbjct: 912 QTAE-MCLRFAALERKLGEIDRARVIYAHASQFCDPRTQTDFWKEWNQFEIETGSEDTFR 970
Query: 319 DAIVGKRRFQ 328
+ + KR Q
Sbjct: 971 EMLRIKRSVQ 980
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 138/308 (44%), Gaps = 43/308 (13%)
Query: 106 DFNRARSVWERALEVDYRN----HTLWLKYAEVEMKNKFINHARNVWDRAV--------- 152
D AR ++E+A+ + +R +W ++AE+E+++ + A R+V
Sbjct: 657 DLESARKIFEKAITIPFRRVDDLAEIWCEWAEMELRHSNYDEAIRTMARSVAPPRNTKGI 716
Query: 153 -----TLLPRVD-----QLWYKYIHMEEMLGNVAGARQIFERWMHW-MPDQQGWLSYIKF 201
TL P+ +LW Y+ +EE LG+V ++++E+ + + Q ++Y F
Sbjct: 717 QYHDDTLPPQTRLFKSLKLWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINYAAF 776
Query: 202 ELRYNEVERARQIYERFVQ--CHP-KVSTWIKY-AKFEMKMG--EVDRARNVYERAVEKL 255
E + +++ER V+ +P W Y +KF + G +++RAR+++E+A++K
Sbjct: 777 LEDNKYFEESFKVFERGVELFSYPVAFEIWNVYLSKFVKRYGGAKLERARDLFEQALDKC 836
Query: 256 ADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVA-FEKQYGDR 314
+ L + + + EE +RA IY+ A + D+Y ++A +G
Sbjct: 837 P-ARFCKPLMLMYGQLEEEHGLVKRAMKIYERATRAVSTDDRFDMYVFYIAKAAATFG-- 893
Query: 315 EGIEDAIVGKRRFQYEDEVRKNP--MNYDIWFDYIRLEESVGNKERAREVYERAIANVPP 372
+ R YE + P ++ + LE +G +RAR +Y A P
Sbjct: 894 -------LAATRPIYERAIESLPDRQTAEMCLRFAALERKLGEIDRARVIYAHASQFCDP 946
Query: 373 AEEKRYWQ 380
+ +W+
Sbjct: 947 RTQTDFWK 954
>sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=syf-1 PE=3 SV=1
Length = 829
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 147/333 (44%), Gaps = 70/333 (21%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHT----LWLKYAEVEMKNKFINHARNVW 148
+W YAK+ E+ D + AR + E+A++V Y++ +W+++AE+E++N+ + A V
Sbjct: 408 LWTNYAKFYEAGGDLSSARRIMEKAVKVPYKSVAELADMWIEWAEMELRNECFDEAMKVM 467
Query: 149 DRAV-------------TLLP--RVD---QLWYKYIHMEEMLGNVAGARQIFERWMHW-M 189
+AV TL P RV +LW Y+ + E + ++ R+++ER +
Sbjct: 468 AKAVQAPKRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERIFELRI 527
Query: 190 PDQQGWLSY---------------------------IKFEL----------RYNEVERAR 212
Q ++Y + FEL R +ER R
Sbjct: 528 ATPQTVVNYANLLEEHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLR 587
Query: 213 QIYERFVQ-CHPKVS--TWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFA 269
++E+ V+ C PK + ++ Y E + G A +YERA +AD++ A+ +F +
Sbjct: 588 DLFEQAVEDCPPKFAKVIYLMYGNLEEERGLARHAMRIYERATRAVADEDRAD-MFNFYI 646
Query: 270 EFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQY 329
R IY+ A+ +P A D+ KF EK+ G+ + AI G Q+
Sbjct: 647 TKSASNFGLPSTRPIYERAIAALPDAEARDMCLKFADMEKRLGEIDRAR-AIYGHAS-QF 704
Query: 330 EDEVRKNPMNYDIWFDYIRLEESVGNKERAREV 362
D R NP W + + E GN++ +E+
Sbjct: 705 CDP-RTNP---GFWTKWDQFEVQHGNEDTYKEM 733
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 137/362 (37%), Gaps = 82/362 (22%)
Query: 105 KDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVD----- 159
++ + S++ERAL + + +W Y + M+ + H R +DRA+ LP
Sbjct: 93 SEYQKVNSLFERALILLNKMPRIWEMYLKFLMQQPLVTHTRRTFDRALRALPITQHNRIW 152
Query: 160 ----------------QLWYKYIHME--------EMLGNVAGARQIFERWMHWM------ 189
++W +Y+ + E+L V + +++ +
Sbjct: 153 ALYRPFANSAEGETAVKIWRRYMQVHPEDAEDFIELLVAVGLYTEAVHKYIEILNNPRFT 212
Query: 190 -PDQQG----WLSYIKFELRYN-----------EVERA-RQIYERFVQCHPKVSTWIKYA 232
+ +G W + + + +VER R ERF K+ W A
Sbjct: 213 SKNSKGHYELWSEMVDLLVEHATAVETGHETGIDVERIIRSGIERFADQRGKL--WCGLA 270
Query: 233 KFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHI 292
+ ++ G +RAR+V+E + + + +F ++ EFEE + + A
Sbjct: 271 TYWIRRGSFERARDVFEEGITTVMTVRDFTLVFDSYTEFEESI-----ISALMEMASTRA 325
Query: 293 PKGRAE-----DLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDE-VRKNPMNYDIWFDY 346
KG + DL + + FE ++ +R F D +R+NP N W
Sbjct: 326 EKGEVDEVADFDLDIRMMRFEH-----------LMDRRPFLLNDVLLRQNPNNVTEWEKR 374
Query: 347 IRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDV 406
+ L NKE + Y AI + P K+ LW NYA + E GD+ R +
Sbjct: 375 VALWGD--NKEEVVKTYLDAIEAIQP---KKAVGALHQLWTNYAKFYEA-GGDLSSARRI 428
Query: 407 YQ 408
+
Sbjct: 429 ME 430
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 99/257 (38%), Gaps = 46/257 (17%)
Query: 158 VDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQ------GWLSYIKFELRYNEVERA 211
+ QLW Y E G+++ AR+I E+ + +P + W+ + + ELR + A
Sbjct: 405 LHQLWTNYAKFYEAGGDLSSARRIMEKAVK-VPYKSVAELADMWIEWAEMELRNECFDEA 463
Query: 212 RQIYERFVQCHPKVST--------------------WIKYAKFEMKMGEVDRARNVYERA 251
++ + VQ PK ST W Y + +D R VYER
Sbjct: 464 MKVMAKAVQA-PKRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERI 522
Query: 252 VE-KLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFE-- 308
E ++A Q V +A E K E + IY+ R DL+ VAFE
Sbjct: 523 FELRIA----TPQTVVNYANLLEEHKYFEESFKIYE---------RGLDLFSYPVAFELW 569
Query: 309 KQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYD--IWFDYIRLEESVGNKERAREVYERA 366
Y + + + R +E V P + I+ Y LEE G A +YERA
Sbjct: 570 NLYLTKAVDRKISIERLRDLFEQAVEDCPPKFAKVIYLMYGNLEEERGLARHAMRIYERA 629
Query: 367 IANVPPAEEKRYWQRYI 383
V + + YI
Sbjct: 630 TRAVADEDRADMFNFYI 646
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 40/308 (12%)
Query: 125 HTLWLKYAEVEMKNKFINHARNVWDRAVTL----LPRVDQLWYKYIHME-------EMLG 173
H LW YA+ ++ AR + ++AV + + + +W ++ ME E +
Sbjct: 406 HQLWTNYAKFYEAGGDLSSARRIMEKAVKVPYKSVAELADMWIEWAEMELRNECFDEAMK 465
Query: 174 NVAGARQIFERWM------HWMPDQ------QGWLSYIKFELRYNEVERARQIYERFVQC 221
+A A Q +R P Q + W Y+ + ++ R++YER +
Sbjct: 466 VMAKAVQAPKRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERIFEL 525
Query: 222 HPKV-STWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETER 280
T + YA + + + +YER ++ + E + + +R ER
Sbjct: 526 RIATPQTVVNYANLLEEHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIER 585
Query: 281 ARCIYKFALDHIPKGRAEDLYRKFVAFEKQYG-DREGIEDAIVGKRRFQYEDEVRKNPMN 339
R +++ A++ P A+ +Y + E++ G R + I + DE R + N
Sbjct: 586 LRDLFEQAVEDCPPKFAKVIYLMYGNLEEERGLARHAMR--IYERATRAVADEDRADMFN 643
Query: 340 YDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGD 399
+ YI S R +YERAIA +P AE + ++ + E G+
Sbjct: 644 F-----YITKSASNFGLPSTRPIYERAIAALPDAEARDMCLKFADM--------EKRLGE 690
Query: 400 MERTRDVY 407
++R R +Y
Sbjct: 691 IDRARAIY 698
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 80 FEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKN- 138
+E I R +T W+ Y +++ + + ERA R++ LW Y K+
Sbjct: 24 YEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMERACVQLPRSYKLWKMYLRFRTKHV 83
Query: 139 KFINHA---------RNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWM 189
+N A ++++RA+ LL ++ ++W Y+ V R+ F+R + +
Sbjct: 84 SKLNAAIFASEYQKVNSLFERALILLNKMPRIWEMYLKFLMQQPLVTHTRRTFDRALRAL 143
Query: 190 PDQQG---WLSYIKFELRYNEVERARQIYERFVQCHPK 224
P Q W Y F E E A +I+ R++Q HP+
Sbjct: 144 PITQHNRIWALYRPFA-NSAEGETAVKIWRRYMQVHPE 180
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 128 WLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYI-----HMEEMLGNVAGA---- 178
WL Y E +++ + + +RA LPR +LW Y+ H+ ++ + +
Sbjct: 38 WLAYIEYKLQKGTVQEQAYIMERACVQLPRSYKLWKMYLRFRTKHVSKLNAAIFASEYQK 97
Query: 179 -RQIFER---WMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVS---TWIKY 231
+FER ++ MP + W Y+KF ++ V R+ ++R ++ P W Y
Sbjct: 98 VNSLFERALILLNKMP--RIWEMYLKFLMQQPLVTHTRRTFDRALRALPITQHNRIWALY 155
Query: 232 AKFEMKMGEVDRARNVYERAVEKLADD-EEAEQLFVAFAEFEE 273
F E + A ++ R ++ +D E+ +L VA + E
Sbjct: 156 RPF-ANSAEGETAVKIWRRYMQVHPEDAEDFIELLVAVGLYTE 197
>sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2
SV=1
Length = 855
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 16/271 (5%)
Query: 81 EDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF 140
E + RV + VW A EES F ++V++R L++ + + YA ++K+
Sbjct: 474 EPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKY 533
Query: 141 INHARNVWDRAVTLL--PRVDQLWYKYIHMEEMLGNVAG-----ARQIFERWMHWMPDQQ 193
+ ++R ++L P V +W Y + + + G AR +FE+ + P +
Sbjct: 534 FEESFKAYERGISLFKWPNVSDIWSTY--LTKFISRYGGRKLERARDLFEQALDGCPPKY 591
Query: 194 G---WLSYIKFELRYNEVERARQIYE---RFVQCHPKVSTWIKYAKFEMKMGEVDRARNV 247
+L Y + E + A +Y+ R V+ + + Y K ++ V R +
Sbjct: 592 AKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGI 651
Query: 248 YERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
Y++A+E L+ DE A ++ + FA+ E + E +RAR IY F ++ + F
Sbjct: 652 YQKAIEVLS-DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDF 710
Query: 308 EKQYGDREGIEDAIVGKRRFQYEDEVRKNPM 338
E ++G+ + I + + +R Q + N M
Sbjct: 711 EVRHGNEDTIREMLRIRRSVQATYNTQVNFM 741
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 139/316 (43%), Gaps = 35/316 (11%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRN----HTLWLKYAEVEMKNKFINHARNVW 148
+W+ +AK+ E + AR + E+A +V+++ ++W + E+E++++ + A +
Sbjct: 397 LWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKLL 456
Query: 149 DRAVTLLPR-----------------VDQLWYKYIHMEEMLGNVAGARQIFERWMHW-MP 190
+A L R ++W +EE LG + +++R + +
Sbjct: 457 RKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIA 516
Query: 191 DQQGWLSYIKFELRYNEVERARQIYERFVQCH--PKVS-TWIKY-AKFEMKMG--EVDRA 244
Q ++Y F + E + + YER + P VS W Y KF + G +++RA
Sbjct: 517 TPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERA 576
Query: 245 RNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKF 304
R+++E+A++ + A+ L++ +A+ EE A +Y A + + D++ +
Sbjct: 577 RDLFEQALDG-CPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIY 635
Query: 305 VAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYE 364
+ K+ + G+ + +Q EV + ++ + +E +G +RAR +Y
Sbjct: 636 I---KRAAEIYGVTHT---RGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYS 689
Query: 365 RAIANVPPAEEKRYWQ 380
P +WQ
Sbjct: 690 FCSQICDPRTTGAFWQ 705
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 155/395 (39%), Gaps = 88/395 (22%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQ--------KDFNRARSVWERALEVDYRNHT 126
R + +E ++ + + +W +Y K +Q + + ERA ++
Sbjct: 52 RLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPR 111
Query: 127 LWLKYAEVEMKNKFINHARNVWDRAVTLLP--RVDQLWYKYIHMEEMLGNVAGARQIFER 184
LWL Y + M + H R +DRA+ LP + ++W Y+ A + + R
Sbjct: 112 LWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRR 171
Query: 185 WMHWMPDQ-QGWLSYIKFELRYNE-VERARQIY--ERFV-------------------QC 221
++ P+ + ++ Y+K R +E +R + ERFV Q
Sbjct: 172 FLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQN 231
Query: 222 HPKVST---------------------WIKYAKFEMKMGEVDRARNVYERAVEKLADDEE 260
KV + W A + ++ G ++AR+VYE A+ + +
Sbjct: 232 PDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRD 291
Query: 261 AEQLFVAFAEFEER--CKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIE 318
Q+F ++A+FEE + E A + + D + DL + FE+ R +
Sbjct: 292 FTQVFDSYAQFEESMIAAKMETASELGREEEDDV------DLELRLARFEQLISRRPLLL 345
Query: 319 DAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREV---YERAIANVPP--A 373
++++ +R+NP + W + L + R RE+ Y A+ V P A
Sbjct: 346 NSVL----------LRQNPHHVHEWHKRVALHQG-----RPREIINTYTEAVQTVDPFKA 390
Query: 374 EEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
K + LW+ +A + E D G ++ R + +
Sbjct: 391 TGKPH-----TLWVAFAKFYE-DNGQLDDARVILE 419
>sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1
Length = 855
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 16/271 (5%)
Query: 81 EDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKF 140
E + RV + VW A EES F ++V++R L++ + + YA ++K+
Sbjct: 474 EPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKY 533
Query: 141 INHARNVWDRAVTLL--PRVDQLWYKYIHMEEMLGNVAG-----ARQIFERWMHWMPDQQ 193
+ ++R ++L P V +W Y + + + G AR +FE+ + P +
Sbjct: 534 FEESFKAYERGISLFKWPNVSDIWSTY--LTKFISRYGGRKLERARDLFEQALDGCPPKY 591
Query: 194 G---WLSYIKFELRYNEVERARQIYE---RFVQCHPKVSTWIKYAKFEMKMGEVDRARNV 247
+L Y + E + A +Y+ R V+ + + Y K ++ V R +
Sbjct: 592 AKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGI 651
Query: 248 YERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
Y++A+E L+ DE A ++ + FA+ E + E +RAR IY F ++ + F
Sbjct: 652 YQKAIEVLS-DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDF 710
Query: 308 EKQYGDREGIEDAIVGKRRFQYEDEVRKNPM 338
E ++G+ + I + + +R Q + N M
Sbjct: 711 EVRHGNEDTIREMLRIRRSVQATYNTQVNFM 741
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 139/316 (43%), Gaps = 35/316 (11%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRN----HTLWLKYAEVEMKNKFINHARNVW 148
+W+ +AK+ E + AR + E+A +V+++ ++W + E+E++++ + A +
Sbjct: 397 LWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKLL 456
Query: 149 DRAVTLLPR-----------------VDQLWYKYIHMEEMLGNVAGARQIFERWMHW-MP 190
+A L R ++W +EE LG + +++R + +
Sbjct: 457 RKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIA 516
Query: 191 DQQGWLSYIKFELRYNEVERARQIYERFVQCH--PKVS-TWIKY-AKFEMKMG--EVDRA 244
Q ++Y F + E + + YER + P VS W Y KF + G +++RA
Sbjct: 517 TPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERA 576
Query: 245 RNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKF 304
R+++E+A++ + A+ L++ +A+ EE A +Y A + + D++ +
Sbjct: 577 RDLFEQALDG-CPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIY 635
Query: 305 VAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYE 364
+ K+ + G+ + +Q EV + ++ + +E +G +RAR +Y
Sbjct: 636 I---KRAAEIYGVTHT---RGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYS 689
Query: 365 RAIANVPPAEEKRYWQ 380
P +WQ
Sbjct: 690 FCSQICDPRTTGAFWQ 705
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 155/395 (39%), Gaps = 88/395 (22%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQ--------KDFNRARSVWERALEVDYRNHT 126
R + +E ++ + + +W +Y K +Q + + ERA ++
Sbjct: 52 RLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPR 111
Query: 127 LWLKYAEVEMKNKFINHARNVWDRAVTLLP--RVDQLWYKYIHMEEMLGNVAGARQIFER 184
LWL Y + M + H R +DRA+ LP + ++W Y+ A + + R
Sbjct: 112 LWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRR 171
Query: 185 WMHWMPDQ-QGWLSYIKFELRYNE-VERARQIY--ERFV-------------------QC 221
++ P+ + ++ Y+K R +E +R + ERFV Q
Sbjct: 172 FLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQN 231
Query: 222 HPKVST---------------------WIKYAKFEMKMGEVDRARNVYERAVEKLADDEE 260
KV + W A + ++ G ++AR+VYE A+ + +
Sbjct: 232 PDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRD 291
Query: 261 AEQLFVAFAEFEER--CKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIE 318
Q+F ++A+FEE + E A + + D + DL + FE+ R +
Sbjct: 292 FTQVFDSYAQFEESMIAAKMETASELGREEEDDV------DLELRLARFEQLISRRPLLL 345
Query: 319 DAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREV---YERAIANVPP--A 373
++++ +R+NP + W + L + R RE+ Y A+ V P A
Sbjct: 346 NSVL----------LRQNPHHVHEWHKRVALHQG-----RPREIINTYTEAVQTVDPFKA 390
Query: 374 EEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
K + LW+ +A + E D G ++ R + +
Sbjct: 391 TGKPH-----TLWVAFAKFYE-DNGQLDDARVILE 419
>sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf3 PE=1 SV=1
Length = 790
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 33/265 (12%)
Query: 86 RVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHAR 145
R+ ++ +W+ Y EES R +++R E+ + + YA + +N + +
Sbjct: 475 RLHKSSKIWMYYLDLEESVGTIETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSF 534
Query: 146 NVWDRAVTLL--PRVDQLWYKYI----------HMEEMLGNVAGARQIFERWMHWMP--- 190
+++R V L P +LW Y+ HME R +FE+ + P
Sbjct: 535 KIYERGVALFSYPVAFELWNLYLTKFVKRYQGTHMER-------TRDLFEQALEGCPPEF 587
Query: 191 DQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVD------RA 244
+ +L Y FE ++ + +R+ I E+ KV T + A + + + +V
Sbjct: 588 SKSIYLLYADFEEKFGKAKRSISILEK---AADKVKTADRLAIYNVLLVKVALNYGVLAT 644
Query: 245 RNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKF 304
R VYE+A+E L+D E + + + FAE E + E +RAR IY + D ++ +
Sbjct: 645 RTVYEKAIESLSDSE-VKDMCLRFAEMETKLGEIDRARLIYIHGSQYCDPRVETDYWKAW 703
Query: 305 VAFEKQYGD-REGIEDAIVGKRRFQ 328
FE +YG+ E +++ + KR Q
Sbjct: 704 QEFEIRYGNPEETVKEMLRIKRSVQ 728
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 147/332 (44%), Gaps = 38/332 (11%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRN----HTLWLKYAEVEMKNKFINHARNVW 148
++ ++A++ E+ D ++R ++E+A V Y+ +W+ +AE+E++++ + AR +
Sbjct: 392 LFSEFARFYENFDDLEQSRIIFEKATHVPYKTVNELAQVWIDWAEMELRHQNFDAARKLI 451
Query: 149 DRAV-------------TLLPRV-----DQLWYKYIHMEEMLGNVAGARQIFERWMHW-M 189
AV +L P+V ++W Y+ +EE +G + R++++R +
Sbjct: 452 GDAVHAPRKSHISFFDESLSPQVRLHKSSKIWMYYLDLEESVGTIETTRKLYDRVFELKI 511
Query: 190 PDQQGWLSYIKFELRYNEVERARQIYERFVQCHP---KVSTWIKY-AKF--EMKMGEVDR 243
Q ++Y E + +IYER V W Y KF + ++R
Sbjct: 512 ATPQVVVNYANLLEENAYFEDSFKIYERGVALFSYPVAFELWNLYLTKFVKRYQGTHMER 571
Query: 244 ARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRK 303
R+++E+A+E E ++ +++ +A+FEE+ + +R+ I + A D + +Y
Sbjct: 572 TRDLFEQALEG-CPPEFSKSIYLLYADFEEKFGKAKRSISILEKAADKVKTADRLAIYNV 630
Query: 304 F-VAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREV 362
V YG + + ++ E + D+ + +E +G +RAR +
Sbjct: 631 LLVKVALNYG-------VLATRTVYEKAIESLSDSEVKDMCLRFAEMETKLGEIDRARLI 683
Query: 363 YERAIANVPPAEEKRYWQRYIYLWINYALYEE 394
Y P E YW+ + I Y EE
Sbjct: 684 YIHGSQYCDPRVETDYWKAWQEFEIRYGNPEE 715
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 146/338 (43%), Gaps = 50/338 (14%)
Query: 107 FNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRV--DQLWYK 164
F +ER+L + ++ +W Y + MK + R ++ A+ LP D +W
Sbjct: 91 FASVNDCFERSLILLHKMPVIWKLYLQFLMKQPNVTKIRCTFNSALRALPVTQHDDIWDM 150
Query: 165 YIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELR---YNEVERARQ-IYERFVQ 220
+ E +G + ++ R++ P + +YI+ + +NE R + I R V
Sbjct: 151 FTKYAEDIGGLFCI-HVYRRYIQVEP--RAIENYIEILCKLGLWNEAARQYEDILNRPVF 207
Query: 221 CHPK----VSTWIKYAKFEMKMGEVDRARN-----VYERAVEKLADDEEAEQLFVAFAEF 271
K W++++ E+ + D +N V+ +++ +D +A +L+ A++
Sbjct: 208 LSAKRKSNYQIWLEFS--ELVVQHPDHTQNIDVEKVFRAGIKRFSD--QAGKLWTYLAQY 263
Query: 272 EERCKETERARCIYKFALDHIPKGRA-EDLYRKFVAFEKQY------------GDREGIE 318
R + E+AR + +++I R ++ FV FE+Q+ D I+
Sbjct: 264 YIRIGDYEKARSTFYEGMNNIMTVRNFTIIFDAFVEFEEQWLSARVEASSGNANDELSID 323
Query: 319 ------DAIVGKRRFQYEDE-VRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVP 371
+ I+ KR D +R+N N D W ++ E + E+ +VY AI NV
Sbjct: 324 FHMAWLEKILDKRPLYINDVLLRQNINNVDEWLRRVKFLED--DSEKVVQVYTDAIKNVN 381
Query: 372 PAEEKRYWQRYIYLWINYA-LYEELDAGDMERTRDVYQ 408
P + L+ +A YE D D+E++R +++
Sbjct: 382 PKLAHGSLGK---LFSEFARFYENFD--DLEQSRIIFE 414
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 225 VSTWIKYAKFEMKMGEVDRARNVYERAVE----KLADDEEAEQLFVAFAEFEERCKETER 280
V W++ KF E + VY A++ KLA +LF FA F E + E+
Sbjct: 352 VDEWLRRVKFLEDDSE--KVVQVYTDAIKNVNPKLAHGSLG-KLFSEFARFYENFDDLEQ 408
Query: 281 ARCIYKFALDHIPKGRAEDLYRKFV-----AFEKQYGD--REGIEDAIVGKRR--FQYED 331
+R I++ A H+P +L + ++ Q D R+ I DA+ R+ + D
Sbjct: 409 SRIIFEKA-THVPYKTVNELAQVWIDWAEMELRHQNFDAARKLIGDAVHAPRKSHISFFD 467
Query: 332 EVRKNPM----NYDIWFDYIRLEESVGNKERAREVYERA 366
E + + IW Y+ LEESVG E R++Y+R
Sbjct: 468 ESLSPQVRLHKSSKIWMYYLDLEESVGTIETTRKLYDRV 506
>sp|Q54Z08|SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum GN=xab2
PE=3 SV=1
Length = 850
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 19/273 (6%)
Query: 79 EFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKN 138
E E + +R+ + +W Y EES F+ +S++E+ +++ + L +A+ +N
Sbjct: 485 ENEPVQKRLFKSIKIWTFYVDLEESFGTFHNTKSIYEKMIQLKVVTPQIILNFAKYLEEN 544
Query: 139 KFINHARNVWDRAVT--LLPRVDQLWYKYIHMEEMLGNVAG-----ARQIFERWMHWMPD 191
K+ ++ V L P V +W Y + + + AG R +FE+ + +P
Sbjct: 545 KYFEDMFKAYEHGVQLFLFPHVQDIWITY--LTKFIQRYAGMKLERTRDLFEQVLSKVPP 602
Query: 192 QQG---WLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGE---VDRAR 245
++ +L Y FE +Y + +Y+R + K + Y + + E V++ R
Sbjct: 603 KESIIFYLMYANFEEQYGLARHSMAVYDRAAKSVDKEDRFKMYLLYIHRASEFFGVNQTR 662
Query: 246 NVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLY-RKF 304
++ +A+E+L D+ + + FA+ E++ E +RAR IY R Y +
Sbjct: 663 EIFSKAIEQLP-DQYVRDMCLKFADMEKKYGEIDRARSIYIHG-SQFSDPRTSMFYWNTW 720
Query: 305 VAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNP 337
FEK +G+ + ++ + +R Q + +NP
Sbjct: 721 SDFEKLHGNEDTFKEMLRIRRSVQ-ASYITQNP 752
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 149/350 (42%), Gaps = 52/350 (14%)
Query: 61 QKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEV 120
Q TDS + D +L K K + ++ +A + E ++AR ++E +L V
Sbjct: 389 QTFTDSIKSIDPQLAKGKL-----------STIYSTFAHFYEQNNKLSQARLIFENSLTV 437
Query: 121 DYRN----HTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVD----------------- 159
+++ TL+ YAE+E+K++ A + R T+ P+
Sbjct: 438 NFKTIDDLSTLYCDYAEMELKHRNYEKAIEILKRG-TVSPKKQNTIIEENEPVQKRLFKS 496
Query: 160 -QLWYKYIHMEEMLGNVAGARQIFERWMHW-MPDQQGWLSYIKFELRYNEVERARQIYER 217
++W Y+ +EE G + I+E+ + + Q L++ K+ E + YE
Sbjct: 497 IKIWTFYVDLEESFGTFHNTKSIYEKMIQLKVVTPQIILNFAKYLEENKYFEDMFKAYEH 556
Query: 218 FVQCH--PKVS-TWIKY-AKFEMKMG--EVDRARNVYERAVEKLADDEEAEQLFVAFAEF 271
VQ P V WI Y KF + +++R R+++E+ + K+ +E+ ++ +A F
Sbjct: 557 GVQLFLFPHVQDIWITYLTKFIQRYAGMKLERTRDLFEQVLSKVPP-KESIIFYLMYANF 615
Query: 272 EERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYED 331
EE+ + +Y A + K ED ++ ++ + + + G V + R +
Sbjct: 616 EEQYGLARHSMAVYDRAAKSVDK---EDRFKMYLLYIHRASEFFG-----VNQTREIFSK 667
Query: 332 EVRKNPMNY--DIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYW 379
+ + P Y D+ + +E+ G +RAR +Y P YW
Sbjct: 668 AIEQLPDQYVRDMCLKFADMEKKYGEIDRARSIYIHGSQFSDPRTSMFYW 717
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 130/289 (44%), Gaps = 43/289 (14%)
Query: 128 WLKYAEVEMKNKFINHARN-VWDRAVTLLPRVDQLWYKYIHMEEMLG---------NVAG 177
WL+Y +E K RN +++RA+ LPR ++W++Y+ +E L +
Sbjct: 48 WLRY--LEFKQGSPQKQRNYIYERAIRELPRSYKIWHQYL-LERTLAIRGKCILENSFEA 104
Query: 178 ARQIFER---WMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVS---TWIKY 231
+FER ++ MP + W+ Y +F + ++ R+ ++R + P W +Y
Sbjct: 105 VNTLFERSLVFLDKMP--RIWIEYCEFLMIQEKITLTRKTFDRALIALPVTQHYRIWNEY 162
Query: 232 AKFEMK--MGEVDRARNVYERAVEKLADD-EEAEQLFVAFAEFEERCKETERARCIYKFA 288
KF +K + + R VY+R ++ + EE + + E++E + + KF
Sbjct: 163 TKFILKRSIPSLTCIR-VYKRYLKIQPEKVEEYIEYLIKIKEWQEVVNQLIKLLDNVKFK 221
Query: 289 LDHIPKGRA-EDLYRKFVAFEKQYGDR-EGIE-DAIVGKRRFQYEDEVRKNPMNYDIWFD 345
KG++ D + + Y + G++ D+++ ++ D++ K +W
Sbjct: 222 ---SIKGKSRHDHWLQLCEILSSYPKQITGVDVDSVIRSGIGKFSDQIGK------LWCY 272
Query: 346 YIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEE 394
+ E+AR+++E A+ +V A + + ++W +Y +E+
Sbjct: 273 LSDYYIQLAQFEKARDIFEEALTSVGTARD------FSFIWESYTQFED 315
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 329 YEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYI 383
YE++V KNP + + W Y+ ++ K+R +YERAI +P + W +Y+
Sbjct: 34 YEEDVSKNPYSVNCWLRYLEFKQGSPQKQR-NYIYERAIRELP--RSYKIWHQYL 85
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 104 QKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQ--L 161
+ F +++ER+L + +W++Y E M + I R +DRA+ LP +
Sbjct: 99 ENSFEAVNTLFERSLVFLDKMPRIWIEYCEFLMIQEKITLTRKTFDRALIALPVTQHYRI 158
Query: 162 WYKYIH--MEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNE--------VERA 211
W +Y ++ + ++ R +++R++ P++ YI++ ++ E ++
Sbjct: 159 WNEYTKFILKRSIPSLTCIR-VYKRYLKIQPEKVE--EYIEYLIKIKEWQEVVNQLIKLL 215
Query: 212 RQIYERFVQCHPKVSTWIK----YAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVA 267
+ + ++ + W++ + + ++ VD +V + K +D + +L+
Sbjct: 216 DNVKFKSIKGKSRHDHWLQLCEILSSYPKQITGVD-VDSVIRSGIGKFSD--QIGKLWCY 272
Query: 268 FAEFEERCKETERARCIYKFALDHIPKGRAED---LYRKFVAFEKQYGDREGIEDAIVGK 324
+++ + + E+AR I++ AL + G A D ++ + FE + I K
Sbjct: 273 LSDYYIQLAQFEKARDIFEEALTSV--GTARDFSFIWESYTQFE---------DSLIAAK 321
Query: 325 RRFQYEDEVRKNPMNYDI 342
+ ED N + +DI
Sbjct: 322 QEILEEDPSEDNLLEFDI 339
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 62/218 (28%)
Query: 224 KVST-WIKYAKFEMKMGEVDRARNVYERAVE---KLADDEEAEQLFVAFAEFEERCKETE 279
K+ST + +A F + ++ +AR ++E ++ K DD L+ +AE E + + E
Sbjct: 406 KLSTIYSTFAHFYEQNNKLSQARLIFENSLTVNFKTIDD--LSTLYCDYAEMELKHRNYE 463
Query: 280 RARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMN 339
+A E L R V+ +KQ E E+ V KR F+ +
Sbjct: 464 KA---------------IEILKRGTVSPKKQNTIIE--ENEPVQKRLFK----------S 496
Query: 340 YDIWFDYIRLEESVGNKERAREVYERAIA--NVPP---------AEEKRYW--------- 379
IW Y+ LEES G + +YE+ I V P EE +Y+
Sbjct: 497 IKIWTFYVDLEESFGTFHNTKSIYEKMIQLKVVTPQIILNFAKYLEENKYFEDMFKAYEH 556
Query: 380 --QRYIY-----LWINYA--LYEELDAGDMERTRDVYQ 408
Q +++ +WI Y + +ERTRD+++
Sbjct: 557 GVQLFLFPHVQDIWITYLTKFIQRYAGMKLERTRDLFE 594
>sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SYF1 PE=3 SV=1
Length = 1031
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 18/250 (7%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W Y+ EES ++V+++ +E+ N + + YA +NK+ + V++R +
Sbjct: 688 LWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLEENKYFEESFKVYERGI 747
Query: 153 TL--LPRVDQLWYKYIHMEEMLGNVAG-----ARQIFERWMHWMPD---QQGWLSYIKFE 202
L P ++W I++ + + G AR +FE+ + P+ + +L Y K E
Sbjct: 748 ELFHFPIAFEIW--NIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKLE 805
Query: 203 LRYNEVERARQIYER---FVQCHPKVSTWIKY-AKFEMKMGEVDRARNVYERAVEKLADD 258
+ +RA IY+R VQ K + Y AK G + R +YERA+E L D
Sbjct: 806 EEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIAKATANFG-LPATRPIYERALESLPDK 864
Query: 259 EEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIE 318
+ AE + FA E + E +RAR IY A + ++++ FE + G +
Sbjct: 865 QTAE-MCRRFARMERKLGEIDRARAIYAHASQFCDPRIEPEFWQEWNDFEIETGSEDTFR 923
Query: 319 DAIVGKRRFQ 328
+ + KR Q
Sbjct: 924 EMLRIKRAVQ 933
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 143/309 (46%), Gaps = 40/309 (12%)
Query: 103 SQKDFNRARSVWERALEVDYRN----HTLWLKYAEVEMKNKFINHARNVWDRAVTL---- 154
++ D +AR ++ERA +V ++ +W ++AE+E++N+ A + RA T+
Sbjct: 608 NEPDLEQARKIFERATKVPFKAVDELAEVWCEWAEMELRNENYEEAIRLMQRATTVPKNT 667
Query: 155 --------------LPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHW-MPDQQGWLSYI 199
L + +LW Y +EE +G V + ++++ M + + Q ++Y
Sbjct: 668 KINYYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYA 727
Query: 200 KFELRYNEVERARQIYERFVQC-HPKVS--TW-IKYAKFEMKMG--EVDRARNVYERAVE 253
F E + ++YER ++ H ++ W I +KF + G +++RAR+++E+A+E
Sbjct: 728 TFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALE 787
Query: 254 KLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGD 313
++ + L++ +A+ EE +RA IY A + ++Y ++A
Sbjct: 788 N-CPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIA------- 839
Query: 314 REGIEDAIVGKRRFQYEDEVRKNP--MNYDIWFDYIRLEESVGNKERAREVYERAIANVP 371
+ + + R YE + P ++ + R+E +G +RAR +Y A
Sbjct: 840 -KATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCD 898
Query: 372 PAEEKRYWQ 380
P E +WQ
Sbjct: 899 PRIEPEFWQ 907
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 90 NTGVWIKYAKWEESQKDFNRARSVWERALEVDY--RNHTLWLKYAEVEMK---NKFINHA 144
N V + YA + E K F + V+ER +E+ + +W Y +K K + A
Sbjct: 719 NAQVIVNYATFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERA 778
Query: 145 RNVWDRAVTLLPR--VDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFE 202
R+++++A+ P L+ Y +EE G A I++R + D + Y +
Sbjct: 779 RDLFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYI 838
Query: 203 LRYNE---VERARQIYERFVQCHPKVST---WIKYAKFEMKMGEVDRARNVYERA 251
+ + R IYER ++ P T ++A+ E K+GE+DRAR +Y A
Sbjct: 839 AKATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHA 893
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 228 WIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKET 278
W A + +K GE +RA +ER + + + Q+F A+AEF E T
Sbjct: 441 WTGLATYWIKRGEFERATATFERGLAAVVTIRDFTQIFDAYAEFSETMIST 491
>sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1
Length = 1031
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 18/250 (7%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W Y+ EES ++V+++ +E+ N + + YA +NK+ + V++R +
Sbjct: 688 LWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLEENKYFEESFKVYERGI 747
Query: 153 TL--LPRVDQLWYKYIHMEEMLGNVAG-----ARQIFERWMHWMPD---QQGWLSYIKFE 202
L P ++W I++ + + G AR +FE+ + P+ + +L Y K E
Sbjct: 748 ELFHFPIAFEIW--NIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKLE 805
Query: 203 LRYNEVERARQIYER---FVQCHPKVSTWIKY-AKFEMKMGEVDRARNVYERAVEKLADD 258
+ +RA IY+R VQ K + Y AK G + R +YERA+E L D
Sbjct: 806 EEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIAKATANFG-LPATRPIYERALESLPDK 864
Query: 259 EEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIE 318
+ AE + FA E + E +RAR IY A + ++++ FE + G +
Sbjct: 865 QTAE-MCRRFARMERKLGEIDRARAIYAHASQFCDPRIEPEFWQEWNDFEIETGSEDTFR 923
Query: 319 DAIVGKRRFQ 328
+ + KR Q
Sbjct: 924 EMLRIKRAVQ 933
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 143/309 (46%), Gaps = 40/309 (12%)
Query: 103 SQKDFNRARSVWERALEVDYRN----HTLWLKYAEVEMKNKFINHARNVWDRAVTL---- 154
++ D +AR ++ERA +V ++ +W ++AE+E++N+ A + RA T+
Sbjct: 608 NEPDLEQARKIFERATKVPFKAVDELAEVWCEWAEMELRNENYEEAIRLMQRATTVPKNT 667
Query: 155 --------------LPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHW-MPDQQGWLSYI 199
L + +LW Y +EE +G V + ++++ M + + Q ++Y
Sbjct: 668 KINYYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYA 727
Query: 200 KFELRYNEVERARQIYERFVQC-HPKVS--TW-IKYAKFEMKMG--EVDRARNVYERAVE 253
F E + ++YER ++ H ++ W I +KF + G +++RAR+++E+A+E
Sbjct: 728 TFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALE 787
Query: 254 KLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGD 313
++ + L++ +A+ EE +RA IY A + ++Y ++A
Sbjct: 788 N-CPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIA------- 839
Query: 314 REGIEDAIVGKRRFQYEDEVRKNP--MNYDIWFDYIRLEESVGNKERAREVYERAIANVP 371
+ + + R YE + P ++ + R+E +G +RAR +Y A
Sbjct: 840 -KATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCD 898
Query: 372 PAEEKRYWQ 380
P E +WQ
Sbjct: 899 PRIEPEFWQ 907
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 90 NTGVWIKYAKWEESQKDFNRARSVWERALEVDY--RNHTLWLKYAEVEMK---NKFINHA 144
N V + YA + E K F + V+ER +E+ + +W Y +K K + A
Sbjct: 719 NAQVIVNYATFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERA 778
Query: 145 RNVWDRAVTLLPR--VDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFE 202
R+++++A+ P L+ Y +EE G A I++R + D + Y +
Sbjct: 779 RDLFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYI 838
Query: 203 LRYNE---VERARQIYERFVQCHPKVST---WIKYAKFEMKMGEVDRARNVYERA 251
+ + R IYER ++ P T ++A+ E K+GE+DRAR +Y A
Sbjct: 839 AKATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHA 893
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 228 WIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKET 278
W A + +K GE +RA +ER + + + Q+F A+AEF E T
Sbjct: 441 WTGLATYWIKRGEFERATATFERGLAAVVTIRDFTQIFDAYAEFSETMIST 491
>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=2 SV=2
Length = 1862
Score = 69.3 bits (168), Expect = 4e-11, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 18/243 (7%)
Query: 148 WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMH---WMPDQQG---WLSYIKF 201
+DR V P LW +Y+ + AR + ER + + +Q+ W++ +
Sbjct: 1599 FDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNL 1658
Query: 202 ELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEA 261
E Y E +++ER VQ + + ++ A K + A +Y R +++ ++
Sbjct: 1659 ENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAV 1718
Query: 262 EQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAI 321
+ AF + + R + + AL+ +P D+ KF E Q GD E
Sbjct: 1719 WIKYGAFVLGRSQAGASHR---VLQRALECLPAKEHVDVIVKFAQLEFQLGDVE------ 1769
Query: 322 VGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAI-ANVPPAEEKRYWQ 380
+ + +E+ + P D+W YI + G++ R+++ER I ++ P K +++
Sbjct: 1770 --RAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQTAVRDIFERVIHLSLAPKRMKFFFK 1827
Query: 381 RYI 383
RY+
Sbjct: 1828 RYL 1830
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 71/327 (21%), Positives = 140/327 (42%), Gaps = 52/327 (15%)
Query: 46 REARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQK 105
+E +EA + P +Q E AD +F+ L+ ++ +W++Y +
Sbjct: 1577 KELSRIEEALMDPGRQP-----ESAD-------DFDRLVLSSPNSSILWLQYMAFHLQAT 1624
Query: 106 DFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKY 165
+ +AR+V ERAL+ + + E + K NVW V LL
Sbjct: 1625 EIEKARAVAERALKT--------ISFREEQEK-------LNVW---VALL---------- 1656
Query: 166 IHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQ-CHPK 224
++E M G+ ++FER + + + +L + + + A ++Y R ++ +
Sbjct: 1657 -NLENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQE 1715
Query: 225 VSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCI 284
+ WIKY F + + + V +RA+E L E + + V FA+ E + + ERA+ I
Sbjct: 1716 KAVWIKYGAFVLGRSQAGASHRVLQRALECLPAKEHVD-VIVKFAQLEFQLGDVERAKAI 1774
Query: 285 YKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWF 344
++ L PK D++ ++ ++G + + D F+ + P +F
Sbjct: 1775 FENTLSTYPK--RTDVWSVYIDMTIKHGSQTAVRDI------FERVIHLSLAPKRMKFFF 1826
Query: 345 D-YIRLEESVGNKERAREVYERAIANV 370
Y+ E+ G ++ + V +A+ V
Sbjct: 1827 KRYLDYEKQHGTEKDVQAVKAKALEYV 1853
Score = 49.3 bits (116), Expect = 5e-05, Method: Composition-based stats.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 38/222 (17%)
Query: 215 YERFVQCHPKVST-WIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQL--FVAFAEF 271
++R V P S W++Y F ++ E+++AR V ERA++ ++ EE E+L +VA
Sbjct: 1599 FDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNL 1658
Query: 272 EERCKETERARCIYKFALD---------HIPK--------GRAEDLYRKFVAFEKQ---- 310
E E +++ A+ H+ A +LY + + +Q
Sbjct: 1659 ENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAV 1718
Query: 311 ---YGDRE-GIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERA 366
YG G A R Q E + D+ + +LE +G+ ERA+ ++E
Sbjct: 1719 WIKYGAFVLGRSQAGASHRVLQRALECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFENT 1778
Query: 367 IANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYQ 408
++ P + W YI + I + G RD+++
Sbjct: 1779 LSTYP--KRTDVWSVYIDMTIKH--------GSQTAVRDIFE 1810
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 18/257 (7%)
Query: 85 RRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHA 144
+RV + +W Y ES R V+ER E+ + YA + ++K+ +
Sbjct: 487 QRVHKSWKLWSFYVDLVESVATLEETRKVYERIFELRIATPQTVVNYANLLEEHKYFEDS 546
Query: 145 RNVWDRAVTLL--PRVDQLWYKYIH--MEEMLGNVAGARQIFERWMHWMPDQQG---WLS 197
V++R + L P +LW Y+ ++ +G + R +FE+ + P + +L
Sbjct: 547 FKVYERGLDLFSYPVAFELWNLYLTKAVDRKIG-IERLRDLFEQALDGCPPKFAKPLYLM 605
Query: 198 YIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGE------VDRARNVYERA 251
Y E A +IYER + VS ++ FE + + + R +YERA
Sbjct: 606 YGNLEEERGLARHAMRIYERATRA---VSDEDRFEMFEFYITKSASNFGLTSTRPIYERA 662
Query: 252 VEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQY 311
+ L D +EA+++ + FA+ E R E +RAR IY A ++K+ AFE Q+
Sbjct: 663 IAALPD-QEAKEMCLKFADMERRLGEIDRARAIYGHASQFCDPRTNAGFWQKWEAFEVQH 721
Query: 312 GDREGIEDAIVGKRRFQ 328
G+ + ++ + KR Q
Sbjct: 722 GNEDTFKEMLRIKRSVQ 738
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 141/356 (39%), Gaps = 74/356 (20%)
Query: 106 DFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVD------ 159
++ + +++ERAL + + +W Y ++ + R +DRA+ LP
Sbjct: 91 EYQKVNALFERALILLNKMPKIWEMYLSFLLQQPLVTQTRRTFDRALRALPITQHNRIWK 150
Query: 160 ---------------QLWYKY--IHME------EMLGNVAGARQIFERWMHWMPDQ--QG 194
++W +Y IH E E+L + + +R+M + D Q
Sbjct: 151 LYKAFARSASGQTAVKIWARYMQIHPENAEDYIELLVELGQYTEAVKRYMEILDDPRFQS 210
Query: 195 WLSYIKFELRYNE-----VERARQI-----------------YERFVQCHPKVSTWIKYA 232
F+L + E V +A+QI +RF K+ W A
Sbjct: 211 KKGKSNFQL-WTEMVDLLVSKAKQIRTGPQVGIDVDAILRSGIDRFADQRGKL--WAGLA 267
Query: 233 KFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHI 292
+ + G ++AR+V+E + + + +F A+ EFEE + + ++
Sbjct: 268 TYWITKGNFEKARDVFEEGITTVMTVRDFTLIFDAYVEFEESIIGSLMEAAAVRADKGNV 327
Query: 293 PKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDE-VRKNPMNYDIWFDYIRLEE 351
+ DL + + FE+ ++ +R F D +R+NP N W + L
Sbjct: 328 DEDADFDLDLRMLRFEQ-----------LMDRRPFLVNDVLLRQNPNNVIEWEKRVALWG 376
Query: 352 SVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVY 407
NKE Y AIA + P K+ ++ LW+NYA + E GD++ R ++
Sbjct: 377 D--NKEEIVNTYTAAIAAINP---KKAHGKFSELWVNYAKFYE-SGGDLDTARVIF 426
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 94 WIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARN------- 146
W+ Y ++++ V ERA + R++ LW Y E INH R
Sbjct: 35 WLAYIEYKQQNGTLYEQAFVMERACKQLPRSYKLWKMYLEFR-----INHLRGRNATKYR 89
Query: 147 --------VWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG---W 195
+++RA+ LL ++ ++W Y+ V R+ F+R + +P Q W
Sbjct: 90 AEYQKVNALFERALILLNKMPKIWEMYLSFLLQQPLVTQTRRTFDRALRALPITQHNRIW 149
Query: 196 LSYIKFELRYNEVERARQIYERFVQCHP 223
Y F R + A +I+ R++Q HP
Sbjct: 150 KLYKAFA-RSASGQTAVKIWARYMQIHP 176
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 99/256 (38%), Gaps = 42/256 (16%)
Query: 157 RVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQ------GWLSYIKFELRYNEVER 210
+ +LW Y E G++ AR IF++ + +P + W + + ELR ++
Sbjct: 401 KFSELWVNYAKFYESGGDLDTARVIFDKAVK-VPFKSVAELADTWCEWAEMELRSENFDK 459
Query: 211 ARQIYERFVQCHPKVST--------------------WIKYAKFEMKMGEVDRARNVYER 250
A I + Q PK ST W Y + ++ R VYER
Sbjct: 460 AVDIMAKATQA-PKKSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVATLEETRKVYER 518
Query: 251 AVE-KLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEK 309
E ++A Q V +A E K E + +Y+ LD A +L+ ++ K
Sbjct: 519 IFELRIA----TPQTVVNYANLLEEHKYFEDSFKVYERGLDLFSYPVAFELWNLYLT--K 572
Query: 310 QYGDREGIEDAIVGKRRFQYEDEVRKNPMNY--DIWFDYIRLEESVGNKERAREVYERAI 367
+ GIE + R +E + P + ++ Y LEE G A +YERA
Sbjct: 573 AVDRKIGIE-----RLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERAT 627
Query: 368 ANVPPAEEKRYWQRYI 383
V + ++ YI
Sbjct: 628 RAVSDEDRFEMFEFYI 643
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 45/272 (16%)
Query: 128 WLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIH--MEEMLGNVAG-------- 177
WL Y E + +N + V +RA LPR +LW Y+ + + G A
Sbjct: 35 WLAYIEYKQQNGTLYEQAFVMERACKQLPRSYKLWKMYLEFRINHLRGRNATKYRAEYQK 94
Query: 178 ARQIFER---WMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVS---TWIKY 231
+FER ++ MP + W Y+ F L+ V + R+ ++R ++ P W Y
Sbjct: 95 VNALFERALILLNKMP--KIWEMYLSFLLQQPLVTQTRRTFDRALRALPITQHNRIWKLY 152
Query: 232 AKFEMKMGEVDRARNVYERAVEKLADD-EEAEQLFVAFAEFEERCKETERARCIYKFALD 290
F + A ++ R ++ ++ E+ +L V ++ E K Y LD
Sbjct: 153 KAF-ARSASGQTAVKIWARYMQIHPENAEDYIELLVELGQYTEAVKR-------YMEILD 204
Query: 291 ----HIPKGRAE-----DLYRKFVAFEKQY--GDREGIE-DAIVGKRRFQYEDEVRKNPM 338
KG++ ++ V+ KQ G + GI+ DAI+ ++ D+ K
Sbjct: 205 DPRFQSKKGKSNFQLWTEMVDLLVSKAKQIRTGPQVGIDVDAILRSGIDRFADQRGK--- 261
Query: 339 NYDIWFDYIRLEESVGNKERAREVYERAIANV 370
+W + GN E+AR+V+E I V
Sbjct: 262 ---LWAGLATYWITKGNFEKARDVFEEGITTV 290
>sp|Q5BH69|SYF1_EMENI Pre-mRNA-splicing factor syf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=syf1
PE=3 SV=1
Length = 851
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 18/249 (7%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W Y ES + V+ER E+ + YA + ++K+ + V++R +
Sbjct: 512 LWSFYVDLVESVSSIEETKKVYERIFELRIATPQTVVNYANLLEEHKYFEESFKVYERGL 571
Query: 153 TLL--PRVDQLWYKYIH--MEEMLGNVAGARQIFERWMHWMPDQQG---WLSYIKFELRY 205
L P +LW Y+ ++ +G + R +FE+ + P + +L Y E
Sbjct: 572 DLFTYPVAFELWNLYLTKAVDRKIG-IERLRDLFEQALDGCPPKFARPLYLMYGNLEEER 630
Query: 206 NEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGE------VDRARNVYERAVEKLADDE 259
A +IYER + VS ++ FE + + + R +YERA+ L D
Sbjct: 631 GLARHAMRIYERATRA---VSDEDRFEMFEFYITKSASNFGLPSTRPIYERAIAALPD-H 686
Query: 260 EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIED 319
EA+++ + FAE E R E +RAR IY A ++K+ AFE Q+G+ + ++
Sbjct: 687 EAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQHGNEDTFKE 746
Query: 320 AIVGKRRFQ 328
+ KR Q
Sbjct: 747 MLRIKRSVQ 755
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 138/361 (38%), Gaps = 82/361 (22%)
Query: 106 DFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVD------ 159
+F + +++ERAL + + +W Y ++ + R +DRA+ LP
Sbjct: 108 EFQKVNTLFERALILLNKMPRIWEMYLTFMLQQPLVTQTRRTFDRALRALPVTQHNRIWK 167
Query: 160 ---------------QLWYKY--IHMEE------MLGNVAGARQIFERWMHWMPDQ---- 192
++W +Y IH E +L + +R+M + +
Sbjct: 168 LYKTFARSASGQTAVKIWARYMQIHPENAEEYINLLVEMGHYTDAIKRYMEILDNPRFQS 227
Query: 193 -------QGWLSYIKFEL-RYNEVERARQI-----------YERFVQCHPKVSTWIKYAK 233
Q W + + + ++E Q +RF K+ W A
Sbjct: 228 REGKSNFQLWTEMVDLLVSKAKKIETGPQTGIDVDAILRSGIDRFADQRGKL--WAGLAT 285
Query: 234 FEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIP 293
+ + G ++AR+V+E + + + +F ++ EFEE + + + A
Sbjct: 286 YWITKGNFEKARDVFEEGITTVMTVRDFTLIFDSYVEFEESIIGS-----LMEAAAVRAD 340
Query: 294 KGRAE-----DLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDE-VRKNPMNYDIWFDYI 347
G+A+ DL + + FE+ ++ +R F D +R+NP N W +
Sbjct: 341 NGKADEEADFDLDLRMLRFEQ-----------LMDRRPFLVNDVLLRQNPNNVIEWEKRV 389
Query: 348 RLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVY 407
L N Y AIA + P K+ ++ LW+NYA + E GD++ R ++
Sbjct: 390 ALWGD--NNVEIVNTYTAAIAAINP---KKAVGKFSELWVNYAKFYE-RGGDLDTARIIF 443
Query: 408 Q 408
+
Sbjct: 444 E 444
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 101/256 (39%), Gaps = 42/256 (16%)
Query: 157 RVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQ------QGWLSYIKFELRYNEVER 210
+ +LW Y E G++ AR IFE+ + +P + + W + + ELR ++
Sbjct: 418 KFSELWVNYAKFYERGGDLDTARIIFEKAVK-VPFKSVNELAETWCEWAEMELRSENFDK 476
Query: 211 ARQIYERFVQCHPKVST--------------------WIKYAKFEMKMGEVDRARNVYER 250
A +I + Q PK ST W Y + ++ + VYER
Sbjct: 477 AVEIMAKATQA-PKKSTVDYFDETLSPQQRIHKSWKLWSFYVDLVESVSSIEETKKVYER 535
Query: 251 AVE-KLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEK 309
E ++A Q V +A E K E + +Y+ LD A +L+ ++ K
Sbjct: 536 IFELRIA----TPQTVVNYANLLEEHKYFEESFKVYERGLDLFTYPVAFELWNLYLT--K 589
Query: 310 QYGDREGIEDAIVGKRRFQYEDEVRKNPMNY--DIWFDYIRLEESVGNKERAREVYERAI 367
+ GIE + R +E + P + ++ Y LEE G A +YERA
Sbjct: 590 AVDRKIGIE-----RLRDLFEQALDGCPPKFARPLYLMYGNLEEERGLARHAMRIYERAT 644
Query: 368 ANVPPAEEKRYWQRYI 383
V + ++ YI
Sbjct: 645 RAVSDEDRFEMFEFYI 660
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 113 VWERALEVDYRNHTLWLKYAEV---EMKNKF-------INHARNVWDRAVTLLPRVDQLW 162
V ERA + R++ LW Y E +KN+ +++RA+ LL ++ ++W
Sbjct: 71 VMERACKQLPRSYKLWKMYLEFRTKHLKNRNAIKYRAEFQKVNTLFERALILLNKMPRIW 130
Query: 163 YKYIHMEEMLGNVAGARQIFERWMHWMPDQQG---WLSYIKFELRYNEVERARQIYERFV 219
Y+ V R+ F+R + +P Q W Y F R + A +I+ R++
Sbjct: 131 EMYLTFMLQQPLVTQTRRTFDRALRALPVTQHNRIWKLYKTFA-RSASGQTAVKIWARYM 189
Query: 220 QCHPKVSTWIKYAKFEMKMG 239
Q HP+ + +Y ++MG
Sbjct: 190 QIHPENAE--EYINLLVEMG 207
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 195 WLSYIKFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEK 254
W++ + E Y E +++ER VQ + + ++ A K + A +Y R +++
Sbjct: 1664 WVALLNLENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKR 1723
Query: 255 LADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDR 314
+ + ++V + F R + E + + + AL+ +PK D+ KF E Q GD
Sbjct: 1724 F---RQEKAVWVKYGAFLLRRGKAEASHRVMQRALECLPKKEHVDVIAKFAQLEFQLGDA 1780
Query: 315 EGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAI-ANVPPA 373
E + R +E + P D+W YI + G+++ AR ++ER I ++ P
Sbjct: 1781 E--------RARAIFESTLSIYPKRTDVWSVYIDMIIKHGSQKEARAIFERVIHLSLAPK 1832
Query: 374 EEKRYWQRYI 383
K +++RY+
Sbjct: 1833 RMKFFFKRYL 1842
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 98/232 (42%), Gaps = 6/232 (2%)
Query: 66 STELADYRLRKRKEFEDL-IRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRN 124
+TE+ R + + + R + VW+ E V+ERA++ +
Sbjct: 1635 ATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYN-EP 1693
Query: 125 HTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFER 184
++L A++ K++ A +++R + + +W KY G + ++ +R
Sbjct: 1694 LKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQR 1753
Query: 185 WMHWMPDQQGWLSYIKF---ELRYNEVERARQIYERFVQCHPK-VSTWIKYAKFEMKMGE 240
+ +P ++ KF E + + ERAR I+E + +PK W Y +K G
Sbjct: 1754 ALECLPKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYPKRTDVWSVYIDMIIKHGS 1813
Query: 241 VDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHI 292
AR ++ER + + + F + ++E++ + + + AL+++
Sbjct: 1814 QKEARAIFERVIHLSLAPKRMKFFFKRYLDYEKQHGSEKDVQAVKAKALEYV 1865
Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 54 AEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSV 113
A+I +K ++ EL + +++R R VW+KY + + + V
Sbjct: 1701 ADIYTKSEKFQEAGEL----------YNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHRV 1750
Query: 114 WERALE-VDYRNHT-LWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEM 171
+RALE + + H + K+A++E + AR +++ +++ P+ +W YI M
Sbjct: 1751 MQRALECLPKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYPKRTDVWSVYIDMIIK 1810
Query: 172 LGNVAGARQIFERWMH 187
G+ AR IFER +H
Sbjct: 1811 HGSQKEARAIFERVIH 1826
Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 33/197 (16%)
Query: 230 KYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQL--FVAFAEFEERCKETERARCIYKF 287
+Y F ++ E+++AR V ERA++ ++ EE E+L +VA E E +++
Sbjct: 1627 QYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFER 1686
Query: 288 ALDHIPKGRA----EDLYRKFVAFEK--------------------QYGD---REGIEDA 320
A+ + + D+Y K F++ +YG R G +A
Sbjct: 1687 AVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEA 1746
Query: 321 IVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQ 380
R Q E + D+ + +LE +G+ ERAR ++E ++ P + W
Sbjct: 1747 --SHRVMQRALECLPKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYP--KRTDVWS 1802
Query: 381 RYIYLWINYALYEELDA 397
YI + I + +E A
Sbjct: 1803 VYIDMIIKHGSQKEARA 1819
>sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2
Length = 832
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 100/335 (29%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHT----LWLKYAEVEMKNKFINHARNVW 148
+W YAK+ E D AR + E+A++V +++ +W+++AE+E++N A +
Sbjct: 411 LWANYAKFYERGGDLRSARIIMEKAVKVPFKSVVELADMWIEWAEMELRNDNFEEAVRIM 470
Query: 149 DRAV-------------TLLP--RVDQ---LWYKYIHMEEMLGNVAGARQIFERWMHW-M 189
+AV TL P RV + LW Y+ + E +G + ++++ER +
Sbjct: 471 AKAVQAPKRSTVDYFDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKKVYERIFELRI 530
Query: 190 PDQQGWLSY---------------------------IKFEL----------RYNEVERAR 212
Q ++Y + FEL R +ER R
Sbjct: 531 ATPQTVVNYANLLEEHKYYEESFKIYERGLDLFSYPVAFELWNMYLTKAVDRKISIERLR 590
Query: 213 QIYERFVQ-CHPKVS--TWIKYAKFEMKMG-----------------EVDRA-------- 244
++E+ V+ C PK + ++ Y E + G + DRA
Sbjct: 591 DLFEQAVEGCPPKFAKIIYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYIT 650
Query: 245 -----------RNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIP 293
R +YERA+ L DDE A + + FA+ E+R E +RAR IY A
Sbjct: 651 KSASNFGLPSTRQIYERAIAALPDDE-ARDMCLKFADMEKRLGEIDRARAIYGHASQFCD 709
Query: 294 KGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQ 328
+ K+ FE Q+G+ + ++ + KR Q
Sbjct: 710 PRTTPAFWTKWEQFEVQHGNEDTFKEMLRIKRAVQ 744
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 140/364 (38%), Gaps = 88/364 (24%)
Query: 106 DFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRV--DQLWY 163
++ + S++ERAL + + +W Y + MK + R +DRA+ LP +++W
Sbjct: 97 EYRKVNSLFERALILLNKMPRIWEMYLKFLMKQPLVTLTRRTFDRALRALPITQHNRIWA 156
Query: 164 KYIHMEEMLGNVAG--ARQIFERWMHWMPD----------QQGWLS-----YI------- 199
Y + AG A +I+ R+M P+ Q G+ + YI
Sbjct: 157 LY---RPFANSAAGPTAVKIWRRYMQVHPEDAEDFIELLYQVGYYTEAAKKYIDVLNNPR 213
Query: 200 --------KFEL----------RYNEVERA-----------RQIYERFVQCHPKVSTWIK 230
FEL EVE R ERF K+ W+
Sbjct: 214 FTSKHGKGHFELWSEMVELLVEHATEVEAGYETGIDVERIIRSGIERFADQRGKL--WVG 271
Query: 231 YAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALD 290
A + ++ G +RAR+V+E + + + +F ++AEFEE + + A
Sbjct: 272 LATYWIRRGSFERARDVFEEGITTVMTVRDFTLVFDSYAEFEESV-----IGAMMEVAGQ 326
Query: 291 HIPKGRAE-----DLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDE-VRKNPMNYDIWF 344
KG + DL + + FE ++ +R F D +R+NP N + W
Sbjct: 327 RAEKGVVDEAADFDLDIRMMRFEH-----------LMDRRPFLLNDVLLRQNPNNVNEWE 375
Query: 345 DYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTR 404
+ L N Y AIA V P K+ + LW NYA + E GD+ R
Sbjct: 376 KRVALWGD--NHNEVVNTYTNAIAAVQP---KKASGPFHQLWANYAKFYE-RGGDLRSAR 429
Query: 405 DVYQ 408
+ +
Sbjct: 430 IIME 433
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 98/255 (38%), Gaps = 46/255 (18%)
Query: 160 QLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQ------GWLSYIKFELRYNEVERARQ 213
QLW Y E G++ AR I E+ + +P + W+ + + ELR + E A +
Sbjct: 410 QLWANYAKFYERGGDLRSARIIMEKAVK-VPFKSVVELADMWIEWAEMELRNDNFEEAVR 468
Query: 214 IYERFVQCHPKVST--------------------WIKYAKFEMKMGEVDRARNVYERAVE 253
I + VQ PK ST W Y +G ++ + VYER E
Sbjct: 469 IMAKAVQA-PKRSTVDYFDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKKVYERIFE 527
Query: 254 -KLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFE--KQ 310
++A Q V +A E K E + IY+ R DL+ VAFE
Sbjct: 528 LRIA----TPQTVVNYANLLEEHKYYEESFKIYE---------RGLDLFSYPVAFELWNM 574
Query: 311 YGDREGIEDAIVGKRRFQYEDEVRKNPMNYD--IWFDYIRLEESVGNKERAREVYERAIA 368
Y + + + R +E V P + I+ Y LEE G A +YERA
Sbjct: 575 YLTKAVDRKISIERLRDLFEQAVEGCPPKFAKIIYLMYGNLEEERGLARHAMRIYERATR 634
Query: 369 NVPPAEEKRYWQRYI 383
V + + YI
Sbjct: 635 AVSDEDRADMFNFYI 649
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 121/308 (39%), Gaps = 40/308 (12%)
Query: 125 HTLWLKYAEVEMKNKFINHARNVWDRAVTL----LPRVDQLWYKYIHMEEMLGNVAGARQ 180
H LW YA+ + + AR + ++AV + + + +W ++ ME N A +
Sbjct: 409 HQLWANYAKFYERGGDLRSARIIMEKAVKVPFKSVVELADMWIEWAEMELRNDNFEEAVR 468
Query: 181 IFERWMH-------------WMPDQ------QGWLSYIKFELRYNEVERARQIYERFVQC 221
I + + P Q + W Y+ +E +++YER +
Sbjct: 469 IMAKAVQAPKRSTVDYFDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKKVYERIFEL 528
Query: 222 HPKV-STWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETER 280
T + YA + + + +YER ++ + E + + +R ER
Sbjct: 529 RIATPQTVVNYANLLEEHKYYEESFKIYERGLDLFSYPVAFELWNMYLTKAVDRKISIER 588
Query: 281 ARCIYKFALDHIPKGRAEDLYRKFVAFEKQYG-DREGIEDAIVGKRRFQYEDEVRKNPMN 339
R +++ A++ P A+ +Y + E++ G R + I + DE R + N
Sbjct: 589 LRDLFEQAVEGCPPKFAKIIYLMYGNLEEERGLARHAMR--IYERATRAVSDEDRADMFN 646
Query: 340 YDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGD 399
+ YI S R++YERAIA +P E + ++ + E G+
Sbjct: 647 F-----YITKSASNFGLPSTRQIYERAIAALPDDEARDMCLKFADM--------EKRLGE 693
Query: 400 MERTRDVY 407
++R R +Y
Sbjct: 694 IDRARAIY 701
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 41/297 (13%)
Query: 128 WLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYI-----HMEEMLGNVAGA---- 178
WL Y ++++ + V +RA LPR +LW Y+ H+ ++ + A
Sbjct: 41 WLAYISYKIQHGTVEEQAFVLERACMQLPRSYKLWKMYLTFRTKHIAKLNAAIFAAEYRK 100
Query: 179 -RQIFER---WMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVS---TWIKY 231
+FER ++ MP + W Y+KF ++ V R+ ++R ++ P W Y
Sbjct: 101 VNSLFERALILLNKMP--RIWEMYLKFLMKQPLVTLTRRTFDRALRALPITQHNRIWALY 158
Query: 232 AKFEMKMGEVDRARNVYERAVEKLADD-EEAEQLFVAFAEFEERCKETERARCIYKFALD 290
F A ++ R ++ +D E+ +L + E K+ +F
Sbjct: 159 RPFANSAAG-PTAVKIWRRYMQVHPEDAEDFIELLYQVGYYTEAAKKYIDVLNNPRFTSK 217
Query: 291 HIPKGRAEDLYRKFV------AFEKQYGDREGIE-DAIVGKRRFQYEDEVRKNPMNYDIW 343
H KG E L+ + V A E + G GI+ + I+ ++ D+ K +W
Sbjct: 218 H-GKGHFE-LWSEMVELLVEHATEVEAGYETGIDVERIIRSGIERFADQRGK------LW 269
Query: 344 FDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDM 400
G+ ERAR+V+E I V + + ++ +YA +EE G M
Sbjct: 270 VGLATYWIRRGSFERARDVFEEGITTVMTVRD------FTLVFDSYAEFEESVIGAM 320
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 223 PKVSTWIKYAKFEMKMGEVDRARNVYERAVE-KLADDEEAEQLFVAFAEFEERCKETERA 281
P W YAKF + G++ AR + E+AV+ E +++ +AE E R E A
Sbjct: 407 PFHQLWANYAKFYERGGDLRSARIIMEKAVKVPFKSVVELADMWIEWAEMELRNDNFEEA 466
Query: 282 RCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYD 341
I A+ PK D + ++ + ++R ++
Sbjct: 467 VRIMAKAV-QAPKRSTVDYF----------------DETLTPQQRVH---------KSWK 500
Query: 342 IWFDYIRLEESVGNKERAREVYER 365
+W Y+ L ESVG E ++VYER
Sbjct: 501 LWSFYVDLVESVGTLEDTKKVYER 524
>sp|Q05022|RRP5_YEAST rRNA biogenesis protein RRP5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RRP5 PE=1 SV=1
Length = 1729
Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 46/236 (19%)
Query: 182 FERWMHWMPDQQG-WLSYIKFELRYNEVERARQIYER------FVQCHPKVSTWIKYAKF 234
FER + P+ W++Y+ F+L+ +E+E+AR++ ER F + K++ WI
Sbjct: 1464 FERLLIGNPNSSVVWMNYMAFQLQLSEIEKARELAERALKTINFREEAEKLNIWIAMLNL 1523
Query: 235 EMKMGEVDRARNVYERAVEKLAD-----------------DEEAE--------------Q 263
E G + V+ RA + + D+ AE
Sbjct: 1524 ENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEKFDKAAELFKATAKKFGGEKVS 1583
Query: 264 LFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVG 323
++V++ +F E + AR I AL +PK ++ RKF E GD E
Sbjct: 1584 IWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPE-------- 1635
Query: 324 KRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYW 379
+ R +E V P D+W Y+ E +K++ +++ER I ++ +++
Sbjct: 1636 RGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFF 1691
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 120/253 (47%), Gaps = 19/253 (7%)
Query: 79 EFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALE-VDYRNH----TLWLKYAE 133
+FE L+ ++ VW+ Y ++ + +AR + ERAL+ +++R +W+ A
Sbjct: 1463 DFERLLIGNPNSSVVWMNYMAFQLQLSEIEKARELAERALKTINFREEAEKLNIWI--AM 1520
Query: 134 VEMKNKFINHA--RNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPD 191
+ ++N F V+ RA + + K + + E+ A ++F+
Sbjct: 1521 LNLENTFGTEETLEEVFSRACQYMDSY-TIHTKLLGIYEISEKFDKAAELFKATAKKFGG 1579
Query: 192 QQG--WLSYIKFELRYNEVERARQIYERFVQCHPK---VSTWIKYAKFEMKMGEVDRARN 246
++ W+S+ F + +NE + AR I ++ PK + K+A+ E G+ +R R+
Sbjct: 1580 EKVSIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRS 1639
Query: 247 VYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIY-KFALDHIPKGRAEDLYRKFV 305
++E V AD + L+ + + E + K+ ++ ++ + I + +A+ + K++
Sbjct: 1640 LFEGLV---ADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFFFNKWL 1696
Query: 306 AFEKQYGDREGIE 318
FE+ GD + IE
Sbjct: 1697 QFEESEGDEKTIE 1709
>sp|Q6CAR6|SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SYF1 PE=3 SV=1
Length = 736
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 86 RVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHAR 145
R+ + +W YA ES F + V+E+ + +D + YA + +N
Sbjct: 443 RIHKSVRLWSYYADLVESYGTFEETKQVYEKIMALDLLTPLFVVNYATLLEENDHFEEMF 502
Query: 146 NVWDRAVTLL-PRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQG-WLSYIKFEL 203
V+++ ++L ++W Y+ + R +FE + P Q+ ++ Y K E
Sbjct: 503 KVYEKGISLFEESAFEIWNLYLVKASPRLGLERLRDLFEDAISKFPTQKALYILYGKLEE 562
Query: 204 RYNEVERARQIYERFVQCHPKVSTWIKY--AKFEMKMGEVDRARNVYERAVEKLADDEEA 261
V A ++Y H K S KY + G + R VY++A+E L +++A
Sbjct: 563 DRGLVRNAMRVYSAMCD-HVKTSETFKYYIGRTVENFG-LAATRPVYDKALESLP-NKDA 619
Query: 262 EQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAI 321
+L + +A+ EE+ E +RAR IY + + Y + FE +G + +D +
Sbjct: 620 SELALDYAQMEEKLGEIDRARAIYGYG-SQFSDPQIIKYYDAWHKFEVAHGTEDTFKDML 678
Query: 322 VGKRRFQ 328
KR Q
Sbjct: 679 RIKRSIQ 685
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 126/328 (38%), Gaps = 77/328 (23%)
Query: 106 DFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKY 165
+++R +++E++L + ++ +WL+Y + M + R+V + A+ LP Q +
Sbjct: 75 EYDRVNALYEKSLVLLHKMPVIWLQYLQFLMLQPKVTKTRSVINEALRSLPV--QQHPRV 132
Query: 166 IHMEEMLGNVAG---ARQIFERWMHWMPDQQGWLSYIKFELRYNEVERARQIYERFVQCH 222
+ + G G + QI++R++ PDQ+ ++ ++ Y+ E A + E
Sbjct: 133 LKLALQFGTKVGGPTSVQIWKRYVLAYPDQKETMAQSLIKMGYHG-EAAVVLIELLNASG 191
Query: 223 PKVSTW--------------------------------------IKYAKFEMKMGEVDRA 244
+ W ++ A F ++ G+++ A
Sbjct: 192 DNYALWTELVDLIGESDKLTLEPPVEQIISSGIKRFPDQRGPLTVQLANFLVRNGDLESA 251
Query: 245 RNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKF 304
R+V+E + + +F A+AEFEER +
Sbjct: 252 RDVFEDGITTANTVRDFTVVFDAYAEFEER-------------------------IVTHL 286
Query: 305 VAFEKQYGD-REGIEDAIVGKRRFQYED-EVRKNPMNYDIWFDYIRLEESVGNKERAREV 362
+ E D R D ++ +R F D +R+ P + W I L E A
Sbjct: 287 IENESPMADLRIAKLDHLLERRPFLISDVRLRREPYSVLEWQKRIALYEDPAETVAA--- 343
Query: 363 YERAIANVPPAEEKRYWQRYIYLWINYA 390
Y A+ ++PPA+ + LWI++A
Sbjct: 344 YTEAVQSIPPAKADGKLSQ---LWISWA 368
Score = 38.9 bits (89), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 128/299 (42%), Gaps = 46/299 (15%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHT----LWLKYAEVEMKNKFINHARNVW 148
+WI +AK+ +D A ++ +A V Y++ + ++L +++ E +N +A +
Sbjct: 363 LWISWAKF--YAEDRETACEIYHKATLVPYKSVSELADVYLAWSQYESENDHWENAVKII 420
Query: 149 DRAV--------------TLLPRVDQ---LWYKYIHMEEMLGNVAGARQIFERWMHW-MP 190
+A+ T R+ + LW Y + E G +Q++E+ M +
Sbjct: 421 KQALESPNTHVSYHNSDLTAQDRIHKSVRLWSYYADLVESYGTFEETKQVYEKIMALDLL 480
Query: 191 DQQGWLSYIKFELRYNEVERARQIYERFVQCHPKVS--TWIKY-AKFEMKMGEVDRARNV 247
++Y + E ++YE+ + + + W Y K ++G ++R R++
Sbjct: 481 TPLFVVNYATLLEENDHFEEMFKVYEKGISLFEESAFEIWNLYLVKASPRLG-LERLRDL 539
Query: 248 YERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAF 307
+E A+ K + L++ + + EE A +Y DH+ + + ++ ++
Sbjct: 540 FEDAISKFPTQK---ALYILYGKLEEDRGLVRNAMRVYSAMCDHV---KTSETFKYYIG- 592
Query: 308 EKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYD---IWFDYIRLEESVGNKERAREVY 363
+E+ + R Y+ + P N D + DY ++EE +G +RAR +Y
Sbjct: 593 -------RTVENFGLAATRPVYDKALESLP-NKDASELALDYAQMEEKLGEIDRARAIY 643
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 25/130 (19%)
Query: 128 WLKYAEVEMKNKFINHARNV-WDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWM 186
W++Y +K + + ++RAVT LPR +LW +Y+ G G
Sbjct: 18 WIRYISSVKNDKTTARQKCILFERAVTALPRSYKLWKEYLDFRS--GLCTG--------- 66
Query: 187 HWMPDQQGWLSYIKFELRYNEVERARQIYER-FVQCHPKVSTWIKYAKFEMKMGEVDRAR 245
L+ IK +E +R +YE+ V H W++Y +F M +V + R
Sbjct: 67 ---------LNPIK---HADEYDRVNALYEKSLVLLHKMPVIWLQYLQFLMLQPKVTKTR 114
Query: 246 NVYERAVEKL 255
+V A+ L
Sbjct: 115 SVINEALRSL 124
>sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas
reinhardtii GN=MBB1 PE=2 SV=1
Length = 662
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 127/329 (38%), Gaps = 60/329 (18%)
Query: 90 NTG-----VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHA 144
NTG +W + E + RAR +++ A+ VD + W K+ +E A
Sbjct: 190 NTGNVNPYIWSAWGWLEARTGNVERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRA 249
Query: 145 RNVWDRAVTLLPRVDQLWYKYIH-----MEEMLGNVAGARQIFERWMHWMPDQQGWLSYI 199
R++W + + R Q Y++ M LG V AR FE
Sbjct: 250 RDLWMQGIQRCRRKPQSQNAYLYNALGCMAAQLGRVGEARSWFEE--------------- 294
Query: 200 KFELRYNEVERARQIYERFVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDE 259
R + V+ W +A E K G+ R ++ +A L +
Sbjct: 295 ---------------GTRSAEGAASVALWQAWAVLEAKQGDPTVVRYLFRKA---LGANP 336
Query: 260 EAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIED 319
+ + +A+A +E R + + + + P A LY+ + EKQ G E
Sbjct: 337 RSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPA--LYQAWALVEKQAGRIE---- 390
Query: 320 AIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYW 379
+ R +E +R +P + +W Y +E GN +RAR++++ + P + Y
Sbjct: 391 ----RARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLFQEGVWADPRSPSTVY- 445
Query: 380 QRYIYLWINYALYEELDAGDMERTRDVYQ 408
+ W E AG+++ R++++
Sbjct: 446 --VFHAWGAL----EWQAGNVQTARELFK 468
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 90 NTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWD 149
+ +W +A E Q D R ++ +AL + R+ + L +A E + H +
Sbjct: 304 SVALWQAWAVLEAKQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGNPQHCLALLR 363
Query: 150 RAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMP-DQQGWLSYIKFELRYNEV 208
R L P L+ + +E+ G + AR++FE+ + P D W +Y E +
Sbjct: 364 RGCELNPTDPALYQAWALVEKQAGRIERARELFEQGLRADPSDLYMWQAYGVMEAEQGNM 423
Query: 209 ERARQIYERFVQCHPKVSTWI----KYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQL 264
+RARQ+++ V P+ + + + E + G V AR +++ AV D ++E
Sbjct: 424 DRARQLFQEGVWADPRSPSTVYVFHAWGALEWQAGNVQTARELFKAAVRV---DPKSETT 480
Query: 265 FVAFAEFEERCKETER 280
+ ++ E E ER
Sbjct: 481 WASWIAMESELGEIER 496
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 7/168 (4%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
V + +A WE Q + ++ R E++ + L+ +A VE + I AR ++++ +
Sbjct: 341 VHLAWALWERRQGNPQHCLALLRRGCELNPTDPALYQAWALVEKQAGRIERARELFEQGL 400
Query: 153 TLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYI-----KFELRYNE 207
P +W Y ME GN+ ARQ+F+ + W + Y+ E +
Sbjct: 401 RADPSDLYMWQAYGVMEAEQGNMDRARQLFQEGV-WADPRSPSTVYVFHAWGALEWQAGN 459
Query: 208 VERARQIYERFVQCHPKV-STWIKYAKFEMKMGEVDRARNVYERAVEK 254
V+ AR++++ V+ PK +TW + E ++GE++R + R E+
Sbjct: 460 VQTARELFKAAVRVDPKSETTWASWIAMESELGEIERVDELRIRQAER 507
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 115/293 (39%), Gaps = 55/293 (18%)
Query: 75 RKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYR----------- 123
R RK ++ + + W K+ E+ Q +F RAR +W + ++ R
Sbjct: 214 RARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGIQRCRRKPQSQNAYLYN 273
Query: 124 ------------------------------NHTLWLKYAEVEMKNKFINHARNVWDRAVT 153
+ LW +A +E K R ++ +A+
Sbjct: 274 ALGCMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYLFRKALG 333
Query: 154 LLPRVDQLWYKYIHMEEML-----GNVAGARQIFERWMHWMP-DQQGWLSYIKFELRYNE 207
PR +Y+H+ L GN + R P D + ++ E +
Sbjct: 334 ANPR-----SRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPALYQAWALVEKQAGR 388
Query: 208 VERARQIYERFVQCHPK-VSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFV 266
+ERAR+++E+ ++ P + W Y E + G +DRAR +++ V +F
Sbjct: 389 IERARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLFQEGVWADPRSPSTVYVFH 448
Query: 267 AFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIED 319
A+ E + + AR ++K A+ PK +E + ++A E + G+ E +++
Sbjct: 449 AWGALEWQAGNVQTARELFKAAVRVDPK--SETTWASWIAMESELGEIERVDE 499
>sp|Q54VF4|Y8236_DICDI TPR-containing protein DDB_G0280363 OS=Dictyostelium discoideum
GN=DDB_G0280363 PE=4 SV=2
Length = 1304
Score = 56.2 bits (134), Expect = 4e-07, Method: Composition-based stats.
Identities = 85/337 (25%), Positives = 141/337 (41%), Gaps = 40/337 (11%)
Query: 52 QEAEIRPPKQKITDSTELADYRLRK------RKEFEDLIRRVRWNTGVWIKYAKWEESQK 105
Q + P K ELAD R+ RK + + + + W++YAK EE
Sbjct: 758 QSLSVLPEKVHWRVYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYG 817
Query: 106 DFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRV-DQLWYK 164
+ + + + L+ N +L +K E K + AR LL ++ DQ YK
Sbjct: 818 RLEKCQKILQLGLKHCPFNESLLIKGIRHEEKMDNLEGAR-------ALLSQLRDQSIYK 870
Query: 165 YIH-------MEEMLGNVAGARQIFERWMHWMPDQQGWLSYI-----KFELRYNEVERAR 212
+E GN+ AR+IF+ M +P W I K E R E ERA
Sbjct: 871 TWRAVMEGGLLEARAGNIDVARKIFKYLMKHVP----WYGPIYQEAYKLEERCEEYERAI 926
Query: 213 QIYERFVQCHPKVST-WIKYAKFEMKM--GEVDRARNVYERAVEKLADDEEAEQLFVAFA 269
I E+ + PK W + K G + RN ERA + ++ E +++ A
Sbjct: 927 NIVEKGLFEDPKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSR-EVTWKIYFEAA 985
Query: 270 EFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQY 329
+ EER K +R Y +++ P+ L++ ++ + + + I I K F+
Sbjct: 986 QIEERSKNLTLSRAAYVKSVELCPENL---LWKVWLGGSRTELNADNI--CIARKLVFRA 1040
Query: 330 EDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERA 366
+EV + + + +Y RLEE GN ++R + + A
Sbjct: 1041 LEEV-PSKLRSLVLLEYSRLEEYAGNINKSRRILKMA 1076
>sp|O74835|RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rrp5 PE=1 SV=1
Length = 1690
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/288 (21%), Positives = 124/288 (43%), Gaps = 25/288 (8%)
Query: 96 KYAKWEESQKDFNRARSV---WERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
K ++++ +KD + S +ER L + LW+ Y + + AR V RA+
Sbjct: 1408 KSDRFDDEEKDLDEIPSTAADFERQLLSSPNSSLLWISYMAYHLNLNELQEAREVGKRAL 1467
Query: 153 TLLPRVDQ-----LWYKYIHMEEMLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNE 207
+ + ++ +W +++E G +++F+ + + ++ +
Sbjct: 1468 STINYREEDEKLNVWMALLNLEVAYGTEDSLKEVFKEACAYCDALIVYEKLCGILIKGGK 1527
Query: 208 VERARQIYERFVQCHPKV-STWIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFV 266
V+ A + + ++ +V S WI+YA F + + ++A + ER+++ L E +
Sbjct: 1528 VDLADEYMQLMLKNFKQVPSVWIQYATFLLNNDKAEKAHGLLERSLQSLPKSEHV-GIIE 1586
Query: 267 AFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRR 326
FA E + + ER R I++ L PK DL+ + E + +D + +R
Sbjct: 1587 KFAILEFKNGDPERGRTIFEGLLSSYPK--RLDLWNVLIDMEMKQ------DDPSIVRRL 1638
Query: 327 FQ----YEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANV 370
FQ +K + W Y E+++G+ E A +V RAI V
Sbjct: 1639 FQRLLALNLSTKKAKFAFKKWLAY---EKNIGDDEGAEQVKRRAIEYV 1683
Score = 51.6 bits (122), Expect = 1e-05, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 28/255 (10%)
Query: 94 WIKYAKWEESQKDFNRARSVWERALE-VDYRNH----TLWLKYAEVEMKNKFINHARNVW 148
WI Y + + + AR V +RAL ++YR +W+ +E+ + + V+
Sbjct: 1443 WISYMAYHLNLNELQEAREVGKRALSTINYREEDEKLNVWMALLNLEVAYGTEDSLKEVF 1502
Query: 149 DRAVTLLPRVDQLWYKYIHMEEMLGNV--AGARQIFERWMHWMPDQ-----QGWLSYIKF 201
A D L I E++ G + G + + +M M W+ Y F
Sbjct: 1503 KEACAY---CDAL----IVYEKLCGILIKGGKVDLADEYMQLMLKNFKQVPSVWIQYATF 1555
Query: 202 ELRYNEVERARQIYERFVQCHPK---VSTWIKYAKFEMKMGEVDRARNVYERAVEKLADD 258
L ++ E+A + ER +Q PK V K+A E K G+ +R R ++E L+
Sbjct: 1556 LLNNDKAEKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPERGRTIFEGL---LSSY 1612
Query: 259 EEAEQLFVAFAEFEERCKETERARCIYKFALD-HIPKGRAEDLYRKFVAFEKQYGDREGI 317
+ L+ + E + + R +++ L ++ +A+ ++K++A+EK GD EG
Sbjct: 1613 PKRLDLWNVLIDMEMKQDDPSIVRRLFQRLLALNLSTKKAKFAFKKWLAYEKNIGDDEGA 1672
Query: 318 EDAIVGKRRFQYEDE 332
E V +R +Y E
Sbjct: 1673 EQ--VKRRAIEYVSE 1685
Score = 40.4 bits (93), Expect = 0.025, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 35/190 (18%)
Query: 228 WIKYAKFEMKMGEVDRARNVYERAVEKLADDEEAEQLFVAFAEF--------EERCKETE 279
WI Y + + + E+ AR V +RA+ + EE E+L V A E+ KE
Sbjct: 1443 WISYMAYHLNLNELQEAREVGKRALSTINYREEDEKLNVWMALLNLEVAYGTEDSLKEVF 1502
Query: 280 RARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMN 339
+ C Y AL +Y K + G + + D +Y + KN
Sbjct: 1503 KEACAYCDALI---------VYEKLCGILIK-GGKVDLAD--------EYMQLMLKNFKQ 1544
Query: 340 Y-DIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAG 398
+W Y + E+A + ER++ ++P +E +++ L E G
Sbjct: 1545 VPSVWIQYATFLLNNDKAEKAHGLLERSLQSLPKSEHVGIIEKFAIL--------EFKNG 1596
Query: 399 DMERTRDVYQ 408
D ER R +++
Sbjct: 1597 DPERGRTIFE 1606
>sp|Q7S1Y0|RNA14_NEUCR mRNA 3'-end-processing protein rna-14 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=rna-14 PE=3 SV=1
Length = 1167
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 35/250 (14%)
Query: 31 NKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRR-VRW 89
N P P Q++ + A P T T+ A R+ +ED IR R
Sbjct: 205 NAPPVPQQVSHQSGATTAAVPTTPSSAAPAVDPTPVTQPAPDRVAI---YEDQIRDDPRG 261
Query: 90 NTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWD 149
W++ K + ++ D + AR V+ER L + + +W++Y ++E+ A ++
Sbjct: 262 AMNAWLELMKEKRARNDIDGARQVYERFLAIFPQAADIWVEYLDLELSLNNFPQAEGIFA 321
Query: 150 RAVTLLPRVDQLWYKYIHM----EEMLGNVAGARQIFERWMHWMPDQQG--------WLS 197
+ + P V+ LW +Y+ ++ + ARQ + ++ D G W
Sbjct: 322 KCLMTTPNVN-LWTRYLDYIRRRNDLNDSTGQARQTVSQAYEFVIDNIGLDKDSGKIWAE 380
Query: 198 YIKFELRYN-------------EVERARQIYERFVQCHP--KVST-WIKYAKFEMKMGEV 241
YI+F +++ ++++ R+ Y+R + C P V+T W +Y +FEM + ++
Sbjct: 381 YIQF-IKFGPGTVGGSQWQDQQKMDQLRKAYQRAI-CVPISNVNTLWKEYDQFEMGLNKL 438
Query: 242 DRARNVYERA 251
+ + E++
Sbjct: 439 TGRKYLSEKS 448
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 27/167 (16%)
Query: 112 SVWERALEVDYRNH-TLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEE 170
+++E + D R WL+ + + I+ AR V++R + + P+ +W +Y+ +E
Sbjct: 249 AIYEDQIRDDPRGAMNAWLELMKEKRARNDIDGARQVYERFLAIFPQAADIWVEYLDLEL 308
Query: 171 MLGNVAGARQIFERWMHWMPDQQGWLSYIKFELRYNEVE----RARQIYER---FVQCHP 223
L N A IF + + P+ W Y+ + R N++ +ARQ + FV +
Sbjct: 309 SLNNFPQAEGIFAKCLMTTPNVNLWTRYLDYIRRRNDLNDSTGQARQTVSQAYEFVIDNI 368
Query: 224 KVS-----TWIKYAKFEMKMG-------------EVDRARNVYERAV 252
+ W +Y +F +K G ++D+ R Y+RA+
Sbjct: 369 GLDKDSGKIWAEYIQF-IKFGPGTVGGSQWQDQQKMDQLRKAYQRAI 414
>sp|Q6CYA2|SYF1_KLULA Pre-mRNA-splicing factor SYF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=SYF1 PE=3 SV=1
Length = 798
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 16/256 (6%)
Query: 93 VWIKYAKWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAV 152
+W Y E + ++ A + +E A+ + +++ YA + + A V++R+V
Sbjct: 504 LWAMYLDLLEVKGNYGTAVNAYETAILIKAATPAMFINYALLNESSGHQAEALAVFERSV 563
Query: 153 TLLP--RVDQLWYKYIHMEEMLGNVAG--ARQIFERWMHWMPDQQGWLSYIK----FELR 204
+ P +W Y+ + + ++ R IFE + +S+ + FEL
Sbjct: 564 EIFPPSVSKSIWDIYLDV-ALKADITKEQKRDIFESAIKLAASGVACVSFFEKYSDFELN 622
Query: 205 YNEVERARQIYER----FVQCHPKVSTWIKYAKFEMKMGEVDRARNVYERAVEKLADDEE 260
ER+ +I + K + W + K +V+ R +YE +E L + +
Sbjct: 623 LGFHERSVEILHKGAKNISDLESKCTLWEECINRSEKQLDVNHTRKLYEECIETLP-NSK 681
Query: 261 AEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDA 320
A + + FA EE E R R + + + + E+L+ + FE +G ++ ++
Sbjct: 682 AIKFLLPFAILEESRNEVARCRALLDYGSKLLKPAQNEELWDFWRNFETMHGTKDSFKN- 740
Query: 321 IVGKRRFQYEDEVRKN 336
++ RRF ED ++ N
Sbjct: 741 MLKARRF-LEDTMKVN 755
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 323 GKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERAREVYERAIANVPPAEEKRYWQRY 382
G YE + ++ +Y L ES G++ A V+ER++ PP+ K W Y
Sbjct: 519 GTAVNAYETAILIKAATPAMFINYALLNESSGHQAEALAVFERSVEIFPPSVSKSIWDIY 578
Query: 383 I 383
+
Sbjct: 579 L 579
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,802,288
Number of Sequences: 539616
Number of extensions: 6886383
Number of successful extensions: 21710
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 19569
Number of HSP's gapped (non-prelim): 729
length of query: 408
length of database: 191,569,459
effective HSP length: 120
effective length of query: 288
effective length of database: 126,815,539
effective search space: 36522875232
effective search space used: 36522875232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)