Query 015354
Match_columns 408
No_of_seqs 138 out of 1001
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 05:31:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015354.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015354hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02175 endoglucanase 100.0 7E-108 1E-112 838.6 41.2 391 18-408 13-406 (484)
2 PLN02266 endoglucanase 100.0 4E-107 9E-112 838.3 42.0 400 8-408 9-431 (510)
3 PLN02340 endoglucanase 100.0 3E-107 6E-112 854.9 40.6 398 8-408 7-420 (614)
4 PLN02420 endoglucanase 100.0 1E-106 3E-111 836.8 41.4 403 4-408 6-433 (525)
5 PLN00119 endoglucanase 100.0 2E-106 4E-111 830.2 39.9 397 8-408 10-415 (489)
6 PLN02909 Endoglucanase 100.0 2E-106 5E-111 828.9 39.0 382 20-408 25-411 (486)
7 PLN02308 endoglucanase 100.0 2E-105 4E-110 825.0 41.2 399 8-407 5-412 (492)
8 PLN02171 endoglucanase 100.0 5E-105 1E-109 840.2 39.9 384 22-408 23-420 (629)
9 PLN02613 endoglucanase 100.0 8E-105 2E-109 820.5 40.5 393 9-408 4-405 (498)
10 PLN02345 endoglucanase 100.0 1E-104 3E-109 814.8 37.8 372 33-408 1-390 (469)
11 PLN03009 cellulase 100.0 4E-103 9E-108 810.6 40.3 384 24-408 23-416 (495)
12 PF00759 Glyco_hydro_9: Glycos 100.0 9.8E-89 2.1E-93 702.2 25.1 364 29-407 1-384 (444)
13 cd00249 AGE AGE domain; N-acyl 97.3 0.013 2.9E-07 59.1 17.2 147 82-263 47-200 (384)
14 cd00249 AGE AGE domain; N-acyl 96.6 0.4 8.7E-06 48.4 20.9 120 118-263 15-142 (384)
15 KOG2787 Lanthionine synthetase 95.9 0.06 1.3E-06 53.2 10.0 114 111-264 239-354 (403)
16 PF07944 DUF1680: Putative gly 95.1 0.17 3.7E-06 54.0 11.1 150 74-264 53-203 (520)
17 PF03663 Glyco_hydro_76: Glyco 93.7 0.89 1.9E-05 46.4 12.2 146 90-263 90-248 (370)
18 COG1331 Highly conserved prote 93.5 0.23 4.9E-06 53.8 7.8 84 173-264 410-496 (667)
19 PF07221 GlcNAc_2-epim: N-acyl 92.7 0.47 1E-05 47.5 8.4 141 85-263 18-166 (346)
20 cd02892 SQCY_1 Squalene cyclas 91.9 11 0.00023 41.4 18.3 159 28-217 325-490 (634)
21 TIGR03463 osq_cycl 2,3-oxidosq 87.6 40 0.00087 37.0 18.3 90 117-216 400-490 (634)
22 PF03663 Glyco_hydro_76: Glyco 86.1 7.4 0.00016 39.6 11.1 131 236-385 85-254 (370)
23 cd04791 LanC_SerThrkinase Lant 83.9 45 0.00096 32.5 15.2 24 240-263 143-166 (321)
24 COG2942 N-acyl-D-glucosamine 2 83.6 17 0.00038 37.2 12.1 125 112-263 73-201 (388)
25 PLN03012 Camelliol C synthase 73.7 1.6E+02 0.0035 33.1 22.9 203 27-263 434-646 (759)
26 COG3533 Uncharacterized protei 72.7 21 0.00046 37.8 9.1 148 72-264 53-206 (589)
27 PF07470 Glyco_hydro_88: Glyco 66.7 15 0.00033 36.5 6.6 136 236-398 24-173 (336)
28 TIGR02474 pec_lyase pectate ly 65.1 1.5E+02 0.0033 29.4 13.3 158 22-215 57-218 (290)
29 PF07470 Glyco_hydro_88: Glyco 61.1 73 0.0016 31.6 10.3 98 90-215 189-287 (336)
30 PF07944 DUF1680: Putative gly 56.3 2.2E+02 0.0048 30.4 13.4 189 177-400 63-280 (520)
31 TIGR01507 hopene_cyclase squal 54.4 3.3E+02 0.0072 30.0 16.7 23 114-137 400-422 (635)
32 PF06917 Pectate_lyase_2: Peri 52.6 25 0.00054 37.3 5.2 46 241-286 442-501 (557)
33 COG4225 Predicted unsaturated 48.6 1.3E+02 0.0028 30.6 9.3 115 73-215 175-303 (357)
34 KOG4056 Translocase of outer m 47.1 28 0.0006 30.6 3.9 38 173-210 11-52 (143)
35 cd04794 euk_LANCL eukaryotic L 46.7 1.1E+02 0.0024 30.5 8.9 114 111-263 182-297 (343)
36 PF13249 Prenyltrans_2: Prenyl 46.5 25 0.00054 28.4 3.5 22 116-139 42-63 (113)
37 COG4225 Predicted unsaturated 45.5 85 0.0018 31.8 7.5 126 242-398 42-184 (357)
38 PF07221 GlcNAc_2-epim: N-acyl 44.8 50 0.0011 32.9 6.0 82 173-263 20-107 (346)
39 cd04792 LanM-like LanM-like pr 44.6 5E+02 0.011 29.2 15.6 122 176-309 493-620 (825)
40 COG3533 Uncharacterized protei 43.1 2.3E+02 0.005 30.4 10.5 148 184-355 74-242 (589)
41 cd02889 SQCY Squalene cyclase 42.0 2E+02 0.0044 28.3 9.9 24 114-138 188-211 (348)
42 TIGR02474 pec_lyase pectate ly 41.9 3.6E+02 0.0078 26.7 11.4 87 111-216 61-150 (290)
43 KOG1586 Protein required for f 41.6 33 0.00072 33.2 3.8 35 179-213 73-107 (288)
44 PF07172 GRP: Glycine rich pro 39.3 24 0.00052 29.0 2.3 23 1-25 1-25 (95)
45 PF09492 Pec_lyase: Pectic aci 39.2 1.2E+02 0.0025 30.2 7.4 161 18-215 48-213 (289)
46 cd02889 SQCY Squalene cyclase 38.7 3.9E+02 0.0084 26.2 16.9 157 28-215 42-203 (348)
47 TIGR01787 squalene_cyclas squa 38.6 5.2E+02 0.011 28.4 13.1 26 113-139 456-481 (621)
48 PLN02993 lupeol synthase 37.4 6.6E+02 0.014 28.5 22.2 163 29-215 436-602 (763)
49 KOG2244 Highly conserved prote 32.9 1E+02 0.0022 33.3 6.1 86 174-264 505-605 (786)
50 cd02892 SQCY_1 Squalene cyclas 30.0 3.4E+02 0.0073 29.8 10.0 24 114-138 473-496 (634)
51 PLN03012 Camelliol C synthase 28.9 95 0.0021 34.9 5.5 30 113-143 586-615 (759)
52 PF06202 GDE_C: Amylo-alpha-1, 28.0 6.5E+02 0.014 25.5 11.3 41 174-214 167-207 (370)
53 PRK15396 murein lipoprotein; P 27.9 53 0.0011 26.0 2.4 23 3-25 1-24 (78)
54 TIGR01787 squalene_cyclas squa 26.4 3.3E+02 0.0071 30.0 9.0 19 117-136 509-527 (621)
55 TIGR00985 3a0801s04tom mitocho 25.4 92 0.002 27.8 3.7 33 174-206 10-46 (148)
56 TIGR01507 hopene_cyclase squal 25.3 2.5E+02 0.0054 30.9 7.9 23 116-139 470-492 (635)
57 PF13243 Prenyltrans_1: Prenyl 25.2 13 0.00028 30.2 -1.6 22 114-136 43-64 (109)
58 cd04791 LanC_SerThrkinase Lant 20.6 7.6E+02 0.017 23.7 13.4 122 111-263 99-224 (321)
No 1
>PLN02175 endoglucanase
Probab=100.00 E-value=6.6e-108 Score=838.60 Aligned_cols=391 Identities=72% Similarity=1.192 Sum_probs=362.0
Q ss_pred HHHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHH
Q 015354 18 LLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTML 97 (408)
Q Consensus 18 ~~~~~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L 97 (408)
++++.+--.+.+|+++|++||+||++||||.||+++|++||++||+.||.+.++||+|||||||||+||++|+|+|+++|
T Consensus 13 ~~~~~~~~~~~~Y~~aL~kSl~Fy~aQrsG~Lp~~~r~~WRgds~l~Dg~~~~~DlsGGwyDAGD~vKf~~p~A~t~t~L 92 (484)
T PLN02175 13 SLLIENTDANPNYKEALSKSLLFFQGQRSGPLPRGQQLSWRASSGLSDGSAAHVDLTGGYYDAGDNVKFNFPMAFTTTML 92 (484)
T ss_pred HHHHhhccccccHHHHHHHHHHHHHHhhCcCCCCcCCCCCccccccccCccCccCCCCCeeeCCCCCeeCchHHHHHHHH
Confidence 55566666778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHH
Q 015354 98 SWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAG 177 (408)
Q Consensus 98 ~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~ 177 (408)
+|+++||++.+.++.+++|+||||++|||||||+..+|.||+|||++++||.+|+|||+++.+|++++|++++|||++++
T Consensus 93 aW~~~e~~~~~~~~~~~~l~~lkw~~Dyllk~~~~~~g~vy~qVG~~~~Dh~~W~~PE~~~~~R~~~~is~~~PGSd~aa 172 (484)
T PLN02175 93 SWSALEYGKRMGPELENARVNIRWATDYLLKCARATPGKLYVGVGDPNVDHKCWERPEDMDTPRTVYSVSPSNPGSDVAA 172 (484)
T ss_pred HhhhhhcccccchHHHHHHHHHHHHHHHHHhCcCCCCCeEEEEeCCCCCCcccCCChhHccCccceEecCCCCCccHHHH
Confidence 99999999999889999999999999999999853389999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhH
Q 015354 178 ETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTY 257 (408)
Q Consensus 178 ~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Y 257 (408)
++|||||+||||||++||+||++||++||++|+||+++|+.|.++++...+++|+|+++|.||++|||+|||+||||++|
T Consensus 173 e~AAALAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~~Y~s~s~y~DEl~WAAawLY~ATgd~~Y 252 (484)
T PLN02175 173 ETAAALAAASMVFRKVDSKYSRLLLATAKKVMQFAIQYRGAYSDSLSSSVCPFYCSYSGYKDELMWGASWLLRATNDPYY 252 (484)
T ss_pred HHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHhCCCCcccCccccccCccccCCCccHHHHHHHHHHHHHhCCHHH
Confidence 99999999999999999999999999999999999999999988765445789998788999999999999999999999
Q ss_pred HHHHHHcCCCCCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecCCCCch
Q 015354 258 YNFIKSVGDDGGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKMPESNL 337 (408)
Q Consensus 258 l~~a~~~~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~ 337 (408)
++.++.++.......|+||+|..++++||+++.+.+.....+.|++.++.++|.+++++++..+++||+||+|+++||++
T Consensus 253 l~~~~~~~~~~~~~~~~Wd~k~~g~~vLla~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~TpgGL~~~~~wg~l 332 (484)
T PLN02175 253 ANFIKSLGGGDQPDIFSWDNKYAGAYVLLSRRALLNKDSNFEQYKQAAENFICKILPDSPSSSTQYTQGGLMYKLPQSNL 332 (484)
T ss_pred HHHHHHcCCCCCCCccCCcCHHHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHhccCCCCCccccccCCceEEECCCCcH
Confidence 99999875444456899999999999999986544444456789999999999999876656899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCCC
Q 015354 338 QYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDSS 408 (408)
Q Consensus 338 ~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~~ 408 (408)
||++|.+||+++|++++..++..++|++......+|++||++|||||||+||.+ |||+||| .|+|||||.+
T Consensus 333 rya~~~afla~~ya~~l~~~~~~~~cg~~~~~~~~~~~fA~~Q~~yiLG~np~~~syvvG~g~n~p~~pHHR~A 406 (484)
T PLN02175 333 QYVTSITFLLTTYAKYMKSTKHTFNCGNSVIVPNALISLSKRQVDYILGDNPIKMSYMVGFSSNFPKRIHHRAS 406 (484)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccCCCccCHHHHHHHHHHhhhhhccCCCCCCceEeecCCCCCCCcccccc
Confidence 999999999999999988777789999888888999999999999999999999 9999999 5899999974
No 2
>PLN02266 endoglucanase
Probab=100.00 E-value=4.2e-107 Score=838.25 Aligned_cols=400 Identities=57% Similarity=0.985 Sum_probs=365.4
Q ss_pred HHHHHHHHHHHHHHhh----------------ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCccc
Q 015354 8 SLRCCCLFLFLLLIEN----------------AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHV 71 (408)
Q Consensus 8 ~~~~~~~~~~~~~~~~----------------~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~ 71 (408)
+|+.....++.|..|. -.++++|.++|++||+||++||||++|++++++||++||+.||.+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~~ 88 (510)
T PLN02266 9 LLRLFIFLAFSLLLCNGFSSSSNNPFHHRHHPRLASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHV 88 (510)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcccccCCCCCCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCcc
Confidence 4444444555666665 456789999999999999999999999999999999999999999999
Q ss_pred ccccceeccCCCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCC
Q 015354 72 DLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCW 151 (408)
Q Consensus 72 dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w 151 (408)
||+|||||||||+||++|+|+|+++|+|+++||++.+.+++||||||||||+|||||||+. +|.||+|||++++||.+|
T Consensus 89 DlsGGwyDAGD~~Kf~~p~a~s~t~L~w~~~ef~~~~~~~~pd~Ldelkw~~D~llk~~~~-~~~vy~qVg~~~~Dh~~W 167 (510)
T PLN02266 89 DLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKSELQNAKDAIRWATDYLLKATAH-PDTIYVQVGDANKDHACW 167 (510)
T ss_pred cCCCcceeCCCCceecchHHHHHHHHHHHHHhhhhccccccHHHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCccccc
Q 015354 152 ERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFY 231 (408)
Q Consensus 152 ~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y 231 (408)
++||+++.+|++|+|+.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++++...+++|
T Consensus 168 ~~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~~~~y 247 (510)
T PLN02266 168 ERPEDMDTPRSVFKVDKNTPGSDVAAETAAALAAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDVCPFY 247 (510)
T ss_pred CChhhcCCCCeeEEeCCCCCchHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCcccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999776433357899
Q ss_pred CCCCccchHHHHHHHHHHHHcCChhHHHHHHHc----CCCCCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHH
Q 015354 232 CSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV----GDDGGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAED 307 (408)
Q Consensus 232 ~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~~----~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~ 307 (408)
.|+++|.||++|||+|||+||||++|+++++.. +.....+.++||+|..++++||++++..+..+.++.|++.++.
T Consensus 248 ~s~s~~~DEl~WAAawLy~ATGd~~Yl~~~~~~~~~~g~~~~~~~~~WD~k~~ga~vLLa~~~~~~~~~~~~~yk~~~d~ 327 (510)
T PLN02266 248 CSYSGYQDELLWGAAWLHKATKNPTYLNYIQVNGQILGADEFDNTFGWDNKHVGARILLSKAFLVQKVQSLHEYKGHADN 327 (510)
T ss_pred ccCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccccccCCccCcchhHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Confidence 887889999999999999999999999999873 3233456899999999999999987544444567899999999
Q ss_pred HHHHhCCCCCCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCC
Q 015354 308 FICRILPNSPFTTTQYTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRC 387 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~ 387 (408)
|+|.++++++...+++||+||+|+++||++||++|++||+++|++++.+++..+.|+.....+.+|+++|++|||||||+
T Consensus 328 ~~~~~~~~~~~~~~~~TpGGL~~~~~wg~lrYa~~~afla~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~ 407 (510)
T PLN02266 328 FICSVIPGAPFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGD 407 (510)
T ss_pred HHHhccCCCCCCccccCCCeeEEeCCCCcHHHHHHHHHHHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccC
Confidence 99999988776678999999999999999999999999999999999887778899987778899999999999999999
Q ss_pred CCCC-CeeeeeC--CCCCCCCCCC
Q 015354 388 EPNK-NVIHGWF--WTEFPEEDSS 408 (408)
Q Consensus 388 NP~~-SfVtG~G--~~~~Phh~~~ 408 (408)
||++ |||+||| .|+|||||.+
T Consensus 408 NP~~~SyvVG~G~~~P~~pHHR~a 431 (510)
T PLN02266 408 NPLKMSYMVGYGPRYPRRIHHRGS 431 (510)
T ss_pred CCCCCceEEecCCCCCccccccCC
Confidence 9999 9999999 5899999974
No 3
>PLN02340 endoglucanase
Probab=100.00 E-value=3e-107 Score=854.92 Aligned_cols=398 Identities=43% Similarity=0.759 Sum_probs=362.1
Q ss_pred HHHHHHHHHHHHHHh--hccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcc
Q 015354 8 SLRCCCLFLFLLLIE--NAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVK 85 (408)
Q Consensus 8 ~~~~~~~~~~~~~~~--~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~K 85 (408)
.|-++++++++|..+ ++...++|.++|++||+||++||||.||++++++||++||+.||.+.++||+|||||||||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~nY~~aL~~Sl~Fy~aQRsG~Lp~~~~~~WR~ds~l~Dg~~~~~DlsGGwyDAGD~vK 86 (614)
T PLN02340 7 SLGGAALLLLVLAAAASAAAEAFNYGGALDKTLLFFEAQRSGKLPANQRVKWRGDSGLKDGFLQGVDLVGGYYDAGDHVK 86 (614)
T ss_pred chhHHHHHHHHHHhhhccccCCCcHHHHHHHHHHHHHHhcCcCCCccCCCcccccccCCCcccccCCCCCCceeCCCcce
Confidence 344444444444333 467788999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccce
Q 015354 86 FNFPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSV 163 (408)
Q Consensus 86 y~~~~a~s~~~L~~~~~ef~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~ 163 (408)
|++|+|+|+++|+|+++||++.| .|++||||||||||+|||||||++ +++||+||||++.||.+|.+||+++.+|++
T Consensus 87 f~~p~a~t~t~L~w~~~ef~~~~~~~~~~~~~ldeirw~~Dyllk~~~~-~~~~~~qVGdg~~DH~~W~~PE~~~~~R~~ 165 (614)
T PLN02340 87 FGLPMAFAVTMLSWGAVDFRKEITALNQMQRTLWAIRWGTDYFIKAHTQ-PNVLWGQVGDGDSDHYCWERAEDMTTPRTA 165 (614)
T ss_pred ecchhHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHhcCC-CCeEEEEeCCCCcccccCCChhhcCCcCce
Confidence 99999999999999999999999 899999999999999999999999 999999999999999999999999999999
Q ss_pred EEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHH
Q 015354 164 YSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLW 243 (408)
Q Consensus 164 ~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~w 243 (408)
|+|++++|||++++++|||||+||||||++||+||++||+|||++|+||+++|+.|.++++. ..++|+| ++|.||++|
T Consensus 166 y~i~~~~pgSd~a~e~AAAlAaas~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~s~~~-a~~~Y~s-s~~~DEl~W 243 (614)
T PLN02340 166 YKLDQNHPGSDLAGETAAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSIQN-AKKFYTS-SGYSDELLW 243 (614)
T ss_pred eecCCCCCccHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCc-cccCCCC-CCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999877665 6789999 999999999
Q ss_pred HHHHHHHHcCChhHHHHHHHc----C-CCCCCccccccchhHHHHHHHhhhccccc----chhhHHHHHHHHHHHHHhCC
Q 015354 244 GAAWLFRATNDVTYYNFIKSV----G-DDGGTDVFSWDNKFAGAHVLLARGALLNR----DKNFEPYRQEAEDFICRILP 314 (408)
Q Consensus 244 AA~~Ly~aTgd~~Yl~~a~~~----~-~~~~~~~~~Wd~~~~~~~~lla~~~~~~~----~~~~~~~~~~ad~~~~~~~~ 314 (408)
||+|||+||||++|+++++.. + .......|+||+|..+++++|+++...+. ...++.|++.+|.|+|..+.
T Consensus 244 AAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~ 323 (614)
T PLN02340 244 AAAWLYRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGGAYTSTLKQYQAKADYFACACLQ 323 (614)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcccccccCCcCCccchhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999874 2 12233579999999999999998654332 23466799999999998887
Q ss_pred CCCCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-Ce
Q 015354 315 NSPFTTTQYTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NV 393 (408)
Q Consensus 315 ~~~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-Sf 393 (408)
+++++++++||+||+|++.||++||++|++||+++|++++..++..++|+....++++|+++|++|||||||+||++ ||
T Consensus 324 ~~~g~~v~~TpgGl~~~~~Wgn~rya~~aafl~~vyad~l~~~~~~~~c~~~~~~~~~y~~fA~sQidYiLG~NP~~~SY 403 (614)
T PLN02340 324 KNGGYNIQLTPGGLMYVREWNNLQYASSAAFLLAVYSDYLSAANAKLRCPDGLVQPQELLDFARSQADYILGKNPKGMSY 403 (614)
T ss_pred cCCCCccccCCCceEEeCCCChHHHHHHHHHHHHHHHHHhhhcccccccCccccCHHHHHHHHHHhhHhhcCCCCCCCce
Confidence 77778999999999999999999999999999999999988776778998767788999999999999999999999 99
Q ss_pred eeeeC--CCCCCCCCCC
Q 015354 394 IHGWF--WTEFPEEDSS 408 (408)
Q Consensus 394 VtG~G--~~~~Phh~~~ 408 (408)
||||| +|+|||||.+
T Consensus 404 VVGyG~n~P~~pHHR~a 420 (614)
T PLN02340 404 MVGYGPKYPIHVHHRGS 420 (614)
T ss_pred EeccCCCCCCccccccc
Confidence 99999 5899999974
No 4
>PLN02420 endoglucanase
Probab=100.00 E-value=1.4e-106 Score=836.78 Aligned_cols=403 Identities=43% Similarity=0.771 Sum_probs=364.7
Q ss_pred cchhHHHHHHHHHHHHHHhh----------ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 015354 4 RRGVSLRCCCLFLFLLLIEN----------AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDL 73 (408)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl 73 (408)
-||+-+.||.+++++++... ..++++|.++|++||+||++||||++|++++++||++||+.||.+.++||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~~~~~Dl 85 (525)
T PLN02420 6 HRHKPCHFLLLLLLLITVFSAALAGVSSETDVGRFDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDL 85 (525)
T ss_pred cccchHHHHHHHHHHHHHHhhccccccccccCCcccHHHHHHHHHHHHHHhcCCCCCcCCCCcccccCcCcCCCcCcccC
Confidence 46666777776666664443 23679999999999999999999999999999999999999999999999
Q ss_pred ccceeccCCCcccccchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCC
Q 015354 74 TGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCW 151 (408)
Q Consensus 74 ~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w 151 (408)
+|||||||||+||++|+|+|+++|+|+++||++.| .+++|+|||||||++|||||||+. ++.+|+|||+++.||.+|
T Consensus 86 sGGwyDAGD~~Kf~~p~a~t~~~L~w~~~ef~d~~~~~g~~~d~Ldeikw~lD~llk~~~~-~~~~~~qvGdg~~DH~~w 164 (525)
T PLN02420 86 VGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDQLASTGELSHALEAIKWGTDYFIKAHTS-PNVLWAEVGDGDTDHYCW 164 (525)
T ss_pred CCcceecCccceecchHHHHHHHHHHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHHHhCcC-CCceEEeeCCCCcccccc
Confidence 99999999999999999999999999999999999 789999999999999999999999 999999999999999999
Q ss_pred CCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCccccc
Q 015354 152 ERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFY 231 (408)
Q Consensus 152 ~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y 231 (408)
++||+++.+|++|.|+.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++.+. .+++|
T Consensus 165 ~~Pe~~~~~R~~~~i~~~~pgsd~aa~~AAALA~AS~vfk~~D~~YA~~~L~~Ak~ly~fA~~~~g~y~~~~~~-~~g~Y 243 (525)
T PLN02420 165 QRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKV-VKSYY 243 (525)
T ss_pred cChhhccccCceEEecCCCCccHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhcCCccCCCCcc-cCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999776554 78899
Q ss_pred CCCCccchHHHHHHHHHHHHcCChhHHHHHHHc----C-CCCCCccccccchhHHHHHHHhhhccccc----chhhHHHH
Q 015354 232 CSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV----G-DDGGTDVFSWDNKFAGAHVLLARGALLNR----DKNFEPYR 302 (408)
Q Consensus 232 ~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~~----~-~~~~~~~~~Wd~~~~~~~~lla~~~~~~~----~~~~~~~~ 302 (408)
+|+++|.||++|||+|||+||||+.|++.+++. + .......|+||++..++++||+++...+. ++.++.|+
T Consensus 244 ~s~s~y~DEl~WAAawLY~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~WD~k~~G~~~Lla~~~~~~~~~~~~~~l~~y~ 323 (525)
T PLN02420 244 ASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKYAGVQLLASMLLKEEKHKQHSKVLQQYK 323 (525)
T ss_pred CCcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCccccCcccCCcccHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 987889999999999999999999999999763 2 12223569999999999999988743321 34567899
Q ss_pred HHHHHHHHHhCCCC-CCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhcc
Q 015354 303 QEAEDFICRILPNS-PFTTTQYTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTG 381 (408)
Q Consensus 303 ~~ad~~~~~~~~~~-~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qi 381 (408)
+.+|.++|.+++++ ++..+.+||+||+|+..|||+||++|+|||+++|++++..++.+++|++....+.+|++||++||
T Consensus 324 ~~ad~~~~~~~~~~~~~~~~~~TpgGl~~~~~Wgs~ryaan~afla~vya~~l~~~~~~~~c~~~~~~~~~~~~fA~~Qi 403 (525)
T PLN02420 324 SKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQI 403 (525)
T ss_pred HHHHHHHHhhccCCCCCCcccccCCeeEEeCCCCchHHHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHhh
Confidence 99999999888764 34578899999999999999999999999999999998877778999887788899999999999
Q ss_pred ccccCCCCCC-CeeeeeC--CCCCCCCCCC
Q 015354 382 GLYIRCEPNK-NVIHGWF--WTEFPEEDSS 408 (408)
Q Consensus 382 dYiLG~NP~~-SfVtG~G--~~~~Phh~~~ 408 (408)
|||||+||++ ||||||| +|+|||||.+
T Consensus 404 dYiLG~NP~~~SYvVGfG~n~P~~pHHR~A 433 (525)
T PLN02420 404 DYILGSNPMETSYLVGYGPKYPTRVHHRGA 433 (525)
T ss_pred hhhccCCCCCCceEeccCCCCCCCcccccc
Confidence 9999999999 9999999 5899999974
No 5
>PLN00119 endoglucanase
Probab=100.00 E-value=1.6e-106 Score=830.24 Aligned_cols=397 Identities=46% Similarity=0.824 Sum_probs=367.2
Q ss_pred HHHHHHHHHHHHHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccc
Q 015354 8 SLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFN 87 (408)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~ 87 (408)
.-.+.||+.||...+..+..++|.++|++||+||++||||.||+.+|++||++|++.||.+.++||+|||||||||+||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~nY~~aL~~sl~Ff~aQRsG~lp~~~r~~WRgds~~~dg~~~~~DlsGGwyDAGD~~Kf~ 89 (489)
T PLN00119 10 WTLSICIVLLVMSMARGAVSTNYGEALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHVDLTGGYYDAGDNMKFG 89 (489)
T ss_pred hHHHHHHHHHHHHHhcccccccHHHHHHHHHHHhHhcCCCCCCccCCCCCcCcccccCCCCCcccCCCCceeCCCCceeC
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEE
Q 015354 88 FPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYS 165 (408)
Q Consensus 88 ~~~a~s~~~L~~~~~ef~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~ 165 (408)
+|+|+|+++|+|+++||++.| .+++++||||||||+|||||||++ ++.||+|||+++.||.+|++||+++.+|++|.
T Consensus 90 ~p~a~s~t~L~w~~~ef~~~~~~~~~~~~~lde~kw~~Dyllk~~~~-~~~~y~qVgdg~~DH~~W~~Pe~~~~~R~~y~ 168 (489)
T PLN00119 90 FPLAFTTTMLAWSNIEMGSQLKAHHELGNALAALKWATDYLIKAHPQ-PNVLYGQVGDGNSDHACWMRPEDMTTPRTSYR 168 (489)
T ss_pred cchHHHHHHHHHHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHhcCC-CCeEEEEeccCCCcccccCChhhCCCcCceee
Confidence 999999999999999999999 789999999999999999999999 99999999999999999999999999999999
Q ss_pred cCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHH
Q 015354 166 VSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGA 245 (408)
Q Consensus 166 ~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA 245 (408)
|+.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++++. .+++|+| ++|.||++|||
T Consensus 169 i~~~~pgSd~a~~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~~~~~-~~g~Y~s-s~~~DEl~WAA 246 (489)
T PLN00119 169 IDAQHPGSDLAGETAAAMAAASIAFAPSDPAYASILIGHAKDLFEFAKAHPGLYQNSIPN-AGGFYAS-SGYEDELLWAA 246 (489)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC-CCCCCCC-CchhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999877664 6889999 99999999999
Q ss_pred HHHHHHcCChhHHHHHHHcCC-CCCCccccccchhHHHHHHHhhhccccc---chhhHHHHHHHHHHHHHhCCCCCCCcc
Q 015354 246 AWLFRATNDVTYYNFIKSVGD-DGGTDVFSWDNKFAGAHVLLARGALLNR---DKNFEPYRQEAEDFICRILPNSPFTTT 321 (408)
Q Consensus 246 ~~Ly~aTgd~~Yl~~a~~~~~-~~~~~~~~Wd~~~~~~~~lla~~~~~~~---~~~~~~~~~~ad~~~~~~~~~~~~~~~ 321 (408)
+|||++|||++|+++++.... ....+.|+||+|..+++++|++++..++ ++.+..|++.++.|+|.+++++ ...+
T Consensus 247 awLY~aTgd~~Yl~~~~~~~~~~~~~~~f~Wd~k~~g~~vlLa~l~~~~~~~~~~~~~~y~~~ae~~~~~~~~~~-~~~~ 325 (489)
T PLN00119 247 AWLHRATNDQTYLDYLTQASNTGGPRTVFAWDDKFVGAQVLVAKLALEGKVESNGKIVEYKSMAEQFICNCAQKG-SNNV 325 (489)
T ss_pred HHHHHHhCCHHHHHHHHhccccCCCCcccChhhhHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHHhhccCC-Cccc
Confidence 999999999999999987532 2234689999999999999998754331 2345689999999999987653 2468
Q ss_pred cccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--
Q 015354 322 QYTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF-- 398 (408)
Q Consensus 322 ~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G-- 398 (408)
++||+||+|++.||++||++|++||+++|++++..++.++.|+.......+|++||++|||||||+||++ |||+|||
T Consensus 326 ~~TpgGl~~~~~wg~~ry~~~~afla~~ya~yl~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGyG~n 405 (489)
T PLN00119 326 KKTPGGLLWFLPWNNLQYTTAASFVLSAYSKYLEAAKASIQCPNGALQASDLLQLARSQVDYILGSNPKNMSYMVGYGTN 405 (489)
T ss_pred eecCCeeEEecCCccHHHHHHHHHHHHHHHHHHhhcccccccCCCCcCHHHHHHHHHHHHHHhcCCCCCCCceEeecCCC
Confidence 8999999999999999999999999999999988777789998777788999999999999999999999 9999999
Q ss_pred CCCCCCCCCC
Q 015354 399 WTEFPEEDSS 408 (408)
Q Consensus 399 ~~~~Phh~~~ 408 (408)
+|+|||||.+
T Consensus 406 ~P~~pHHR~a 415 (489)
T PLN00119 406 YPKKPHHRGA 415 (489)
T ss_pred CCCccccccC
Confidence 5899999974
No 6
>PLN02909 Endoglucanase
Probab=100.00 E-value=2.1e-106 Score=828.88 Aligned_cols=382 Identities=45% Similarity=0.840 Sum_probs=352.9
Q ss_pred HHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHH
Q 015354 20 LIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSW 99 (408)
Q Consensus 20 ~~~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~ 99 (408)
...+...+++|.++|++||+||++||||.||++++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|
T Consensus 25 ~~~~~~~~~nY~~aL~~sl~Fy~aQRsG~lp~~~~~~Wr~ds~l~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~~~L~w 104 (486)
T PLN02909 25 LVVAVGTHFNYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTVTTLAW 104 (486)
T ss_pred hhhccCCCCcHHHHHHHHHHHHHHhcCcCCCCCCCCCCCcccccccCCccccCCCCCceeCCCCceeCCchHHHHHHHHH
Confidence 45557778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHccccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHH
Q 015354 100 STLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAG 177 (408)
Q Consensus 100 ~~~ef~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~ 177 (408)
+++||++.| .+++||||||||||+|||||||+. +|.||+|||++++||.+|++||+++.+|++|.|+.++|||++++
T Consensus 105 ~~~~y~~~~~~~g~~~d~ldeikw~~D~llk~~~~-~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~i~~~~pgtd~a~ 183 (486)
T PLN02909 105 STLAYEKELRATGELENVRAAIRWGTDYFLKAASR-KNRLYVQVGDPNLDHQCWVRPENMKTPRTVLEIDEKTPGTEIAA 183 (486)
T ss_pred HHHHhHHHHhhcCChHHHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCCCcccCCChhhccCCceeEecCCCCCCcHHHH
Confidence 999999999 789999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhH
Q 015354 178 ETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTY 257 (408)
Q Consensus 178 ~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Y 257 (408)
++|||||+||||||++||+||++||++||++|+||+++|+.|.. ..++|+|+++|.||++|||+|||+||||++|
T Consensus 184 ~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~-----~~~~y~s~s~y~DEl~WAAawLy~aTgd~~Y 258 (486)
T PLN02909 184 ETAAAMAASSMVFRHVDHKYSRRLLNKAKLLFKFAKAHKGTYDG-----ECPFYCSYSGYNDELLWAATWLYKATKKQMY 258 (486)
T ss_pred HHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCCCcCC-----CCCccccCCCcchHHHHHHHHHHHHhCCHHH
Confidence 99999999999999999999999999999999999999998863 3578888788999999999999999999999
Q ss_pred HHHHHHcCCCCCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecCCCCch
Q 015354 258 YNFIKSVGDDGGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKMPESNL 337 (408)
Q Consensus 258 l~~a~~~~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~ 337 (408)
+++++........+.|+||+|..+++++|+++.+.. +..++.|++.+|.++|.++++++...+.+||+||+|+..||++
T Consensus 259 l~~~~~~~~~~~~~~~sWD~k~~g~~~lLa~~~~~~-~~~~~~y~~~ad~~~~~~~~~~~~~~~~~TpgGl~~~~~wgn~ 337 (486)
T PLN02909 259 LKYIKHEAISASVAEFSWDLKYAGAQVLLSKLNFEG-EKGLQSYKQQADSFVCSVLPGSPFHQVFITPGGMIHLRDGANS 337 (486)
T ss_pred HHHHHhcccccCCCccCCcccccHHHHHHHHhhccc-chhHHHHHHHHHHHHHHhccCCCCcccccCCCceeEecCCChH
Confidence 999987432224467999999999999998864332 2456789999999999888876555778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCCC
Q 015354 338 QYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDSS 408 (408)
Q Consensus 338 ~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~~ 408 (408)
||++|++||+++|++++.+...+++|++..+.+++|+++|++|||||||+||++ ||||||| +|+|||||.+
T Consensus 338 rya~~aafLa~~ya~~l~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n~P~~pHHR~a 411 (486)
T PLN02909 338 QYVTSTAFLFSVYSDILRRHNQKVMCGNQQFDSTRLMAFAKQQIDYLLGANPQGRSYMVGFGPNPPKQPHHRGA 411 (486)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCceEeccCCCCcCCcccccc
Confidence 999999999999999987666789999888889999999999999999999999 9999999 6899999964
No 7
>PLN02308 endoglucanase
Probab=100.00 E-value=1.9e-105 Score=824.95 Aligned_cols=399 Identities=50% Similarity=0.928 Sum_probs=364.1
Q ss_pred HHHHHHHHHH--HHHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcc
Q 015354 8 SLRCCCLFLF--LLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVK 85 (408)
Q Consensus 8 ~~~~~~~~~~--~~~~~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~K 85 (408)
+|..-+|+.| +++..++.++++|.++|++||+||++||||+||++++++||++|++.||.+.++||+|||||||||+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~al~~sl~fy~~QRsG~lp~~~~~~Wr~~s~~~dg~~~~~DlsGGWyDAGD~~K 84 (492)
T PLN02308 5 SLAAPAIVLLLLLFSPPVIGAGHDYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALHDGSSAGVDLTGGYYDAGDNVK 84 (492)
T ss_pred hHHHHHHHHHHHHHccccccCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCcCCCCCCCeeeCCCCceeCCCcCe
Confidence 3444444444 44556689999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEE
Q 015354 86 FNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYS 165 (408)
Q Consensus 86 y~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~ 165 (408)
|++|+++|+++|+|+++||++.+.++.+++|||||||+|||||||+. +|.||+|||++..||.+|++||+++.+|++|.
T Consensus 85 y~~p~a~s~t~L~w~~~e~~~~~~~e~~~~ldeikw~~D~llkm~~~-~~~vy~qVg~~~~dh~~W~~Pe~~~~~R~~y~ 163 (492)
T PLN02308 85 FGFPMAFTTTLMSWSIIDFGRTMGPELENAVKAVKWATDYLMKATAI-PNVVYVQVGDAYSDHNCWERPEDMDTLRTVYK 163 (492)
T ss_pred ecCchHHHHHHHHHHHHHhHhhhcchhHHHHHHHHHHHHHHHHhcCC-CCeEEEEecCCCCCccCCCChhHcCCcceEEe
Confidence 99999999999999999999999778999999999999999999999 99999999999999999999999999999999
Q ss_pred cCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHH
Q 015354 166 VSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGA 245 (408)
Q Consensus 166 ~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA 245 (408)
|+.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.+++++..+++|+++++|.||++|||
T Consensus 164 ~~~~~pgSd~a~~~AAAlA~as~vf~~~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~~~~~~Y~~~s~~~DEl~WAA 243 (492)
T PLN02308 164 IDPSHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLDRAVRVFAFADKYRGAYSSSLHAAVCPFYCDFNGYQDELLWGA 243 (492)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCcccCCCcCCCCcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987766545688988788999999999
Q ss_pred HHHHHHcCChhHHHHHHH----cCCCCCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcc
Q 015354 246 AWLFRATNDVTYYNFIKS----VGDDGGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTT 321 (408)
Q Consensus 246 ~~Ly~aTgd~~Yl~~a~~----~~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~ 321 (408)
+|||+||||++|+++++. ++.......|+||+|..++.+||+++.+.+.++.++.|++++|.|+|.++++++...+
T Consensus 244 awLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~f~WD~k~~G~~~Lla~~~~~~~~~~~~~~~~~ad~~l~~~~~~~~~~~~ 323 (492)
T PLN02308 244 AWLHKASRRREYREYIVKNEVILGAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFQSFKQNADGFICSLLPGISHPQV 323 (492)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCCCCCcccccccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhccCCCCCcc
Confidence 999999999999999877 3333335679999999999999998655555667889999999999999887654568
Q ss_pred cccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--
Q 015354 322 QYTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF-- 398 (408)
Q Consensus 322 ~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G-- 398 (408)
++||+||+|+..||++||++|++||+++|++++..++..+.|+.......+|+++|++|||||||+||++ |||||||
T Consensus 324 ~~TpgGl~~~~~~snlrya~naafLa~~ya~~l~~~~~~~~cg~~~~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n 403 (492)
T PLN02308 324 QYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGESTASPALLRQVAKRQVDYILGDNPLRMSYMVGYGSR 403 (492)
T ss_pred eeCCCeeEEeCCCchHHHHHHHHHHHHHHHHHHhhcCCccccCCCccCHHHHHHHHHhccceeccCCCCCCceEeccCCC
Confidence 9999999999999999999999999999999987766778898877888999999999999999999999 9999999
Q ss_pred CCCCCCCCC
Q 015354 399 WTEFPEEDS 407 (408)
Q Consensus 399 ~~~~Phh~~ 407 (408)
+|+|||||.
T Consensus 404 ~P~~pHHR~ 412 (492)
T PLN02308 404 FPQRIHHRG 412 (492)
T ss_pred CCCchhhcC
Confidence 589999995
No 8
>PLN02171 endoglucanase
Probab=100.00 E-value=4.7e-105 Score=840.17 Aligned_cols=384 Identities=46% Similarity=0.804 Sum_probs=355.2
Q ss_pred hhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHHHH
Q 015354 22 ENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWST 101 (408)
Q Consensus 22 ~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~ 101 (408)
-.+.++++|.++|++||+||++||||.+|++++++||++|++.||.+.++||+|||||||||+||++|+|+|+++|+|++
T Consensus 23 ~~~~~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~~~~vDlsGGwyDAGD~vKf~~p~a~s~t~L~w~~ 102 (629)
T PLN02171 23 PVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSI 102 (629)
T ss_pred ccccCchhHHHHHHHHHHHHHHccCCCCCcccCCCCccCCCCCCCCcCcccCCCCceeCCCCceeccchHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHccccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHH
Q 015354 102 LEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGET 179 (408)
Q Consensus 102 ~ef~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~ 179 (408)
+||++.| .++++++|||||||+|||||||++ +|+||+|||+++.||.+|.+||+++.+|++|+|++++|||++++++
T Consensus 103 ~e~~~~~~~~g~~~~~Ldeikw~~Dyllk~~~~-~~~~y~qVgdg~~DH~~W~~Pe~~~~~R~~y~i~~~~pgSd~a~e~ 181 (629)
T PLN02171 103 IEYGKQMAAAGELGHAMDAVKWGTDYFIKAHPE-PNVLYGEVGDGDTDHYCWQRPEDMTTDRQAYRIDPQNPGSDLAGET 181 (629)
T ss_pred HHhHHHHhhcCCcHHHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCccccCcCChhHccccceeEEecCCCCchHHHHHH
Confidence 9999999 789999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHH
Q 015354 180 AAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYN 259 (408)
Q Consensus 180 AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~ 259 (408)
|||||+||||||++||+||++||+|||++|+||+++|+.|.++++. .+++|+|+++|.||++|||+|||+||||++|++
T Consensus 182 AAAlAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~-~~~~Y~s~s~y~DEl~WAAawLy~ATgd~~Yl~ 260 (629)
T PLN02171 182 AAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITV-AQKYYRSVSGYGDELLWAAAWLYQATNNQYYLD 260 (629)
T ss_pred HHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcc-cCCccCCCCCccHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999999999877664 788999867899999999999999999999999
Q ss_pred HHHHc----C-CCCCCccccccchhHHHHHHHhhhccccc----chhhHHHHHHHHHHHHHhCCCCCCCcccccCCCcee
Q 015354 260 FIKSV----G-DDGGTDVFSWDNKFAGAHVLLARGALLNR----DKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMY 330 (408)
Q Consensus 260 ~a~~~----~-~~~~~~~~~Wd~~~~~~~~lla~~~~~~~----~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~ 330 (408)
++++. + .......|+||++..++++|++++...++ ...++.|++.+|.|+|.+++++ ...+.+||+|++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~f~WD~k~~G~~~L~a~~~~~~~~~~~~~~~~~y~~~ad~~~~~~l~~~-~~~~~~TpgGl~~ 339 (629)
T PLN02171 261 YLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMCSCLGKG-ARNVQKTPGGLIY 339 (629)
T ss_pred HHHHHHHhhccCcccCccccccccchHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHhhccCC-CceeeecCCeeEE
Confidence 99874 2 12234579999999999999988654332 3467899999999999988664 3478999999999
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCC
Q 015354 331 KMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDS 407 (408)
Q Consensus 331 ~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~ 407 (408)
.+.|||+||++|++||+++|++++.+++..++|+....+..+|+++|++|||||||+||++ ||||||| +|+|||||.
T Consensus 340 ~~~Wgs~~y~~naafl~~vyad~~~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~Np~~~SYvVGyG~n~P~~pHHR~ 419 (629)
T PLN02171 340 RQRWNNMQFVTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRATSYMVGYGANYPRQVHHRG 419 (629)
T ss_pred ECCCChHHHHHHHHHHHHHHHHHhhhcccccccccccCCHHHHHHHHHHhhhhhcCCCCCCCceEeecCCCCCCCccccc
Confidence 9999999999999999999999998777779998877889999999999999999999999 9999999 589999997
Q ss_pred C
Q 015354 408 S 408 (408)
Q Consensus 408 ~ 408 (408)
+
T Consensus 420 a 420 (629)
T PLN02171 420 S 420 (629)
T ss_pred c
Confidence 5
No 9
>PLN02613 endoglucanase
Probab=100.00 E-value=7.6e-105 Score=820.48 Aligned_cols=393 Identities=46% Similarity=0.824 Sum_probs=359.6
Q ss_pred HHHHHHHHHHHH--HhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCccc
Q 015354 9 LRCCCLFLFLLL--IENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKF 86 (408)
Q Consensus 9 ~~~~~~~~~~~~--~~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky 86 (408)
|.+|||++|.|. ..++.++++|.++|++||+||++||||.||++++++||++||+.||.+.++||+|||||||||+||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~Y~~aL~~sl~Fy~~QRsG~lp~~~~~~Wr~ds~l~Dg~~~~~DlsGGwyDAGD~~Ky 83 (498)
T PLN02613 4 LLVLMLVGMFLAFESLVALESPDYGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGKPENVNLTGGYYDAGDNVKF 83 (498)
T ss_pred ehHHHHHHHHHHhhceeecccchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccccCCCcccCcccCCCCceeCCCCcee
Confidence 446777777543 344888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceE
Q 015354 87 NFPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVY 164 (408)
Q Consensus 87 ~~~~a~s~~~L~~~~~ef~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~ 164 (408)
++|+|+|+++|+|+++||++.| +|++||||||||||+|||||||+. +|+||+|||++..||.+|++||+++.+|++|
T Consensus 84 ~~p~a~s~t~L~w~~~e~~~~~~s~~~~~d~ldeikw~lD~llkm~~~-~~~~~~QVGdg~~dH~~W~~Pe~~~~~R~~~ 162 (498)
T PLN02613 84 GWPMAFTVTLLSWAAIEYQNEISSVNQLGYLRSAIRWGTDFILRAHTS-PTTLYTQVGDGNADHQCWERPEDMDTPRTLY 162 (498)
T ss_pred cCchHHHHHHHHHHHHHhHHHHhhcCCchHHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCccccccCCccccCCCCeeE
Confidence 9999999999999999999999 899999999999999999999999 9999999999999999999999999999999
Q ss_pred EcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHH
Q 015354 165 SVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWG 244 (408)
Q Consensus 165 ~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wA 244 (408)
.++.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.+ ..++|.++++|.||++||
T Consensus 163 ~~t~~~pgTd~a~~~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~~a~~~~g~y~~-----~~~~y~s~s~~~DEl~WA 237 (498)
T PLN02613 163 KITSSSPGSEAAGEAAAALAAASLVFKDVDSSYSSKLLNHARSLFEFADKYRGSYQA-----SCPFYCSYSGYQDELLWA 237 (498)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCCCCcCC-----CCCcccccCccchHHHHH
Confidence 999999999999999999999999999999999999999999999999999999875 356888767899999999
Q ss_pred HHHHHHHcCChhHHHHHHHcCC-CCCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccc
Q 015354 245 AAWLFRATNDVTYYNFIKSVGD-DGGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQY 323 (408)
Q Consensus 245 A~~Ly~aTgd~~Yl~~a~~~~~-~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~ 323 (408)
|+|||++|||++|++.++.... ......|+||+|..+++++|++....+. ...+.|++.++.++|.++++.++..+++
T Consensus 238 AawLy~aTGd~~Yl~~~~~~~~~~~~~~~~~Wd~~~~G~~vLla~~~~~~~-~~~~~yk~~~e~~~~~~~~~~~~~~~~~ 316 (498)
T PLN02613 238 AAWLYKATGEKKYLNYVISNKGWSQAVNEFSWDNKFAGAQALLASEFYGGA-NDLAKFKTDVESFVCALMPGSSSVQIKT 316 (498)
T ss_pred HHHHHHHhCCHHHHHHHHhccccccCCCccCccchHHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHhccCCCCccccc
Confidence 9999999999999999988522 1234579999999999999987643332 4467899999999999988765557899
Q ss_pred cCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcc-cccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--C
Q 015354 324 TQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATK-HYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--W 399 (408)
Q Consensus 324 tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~ 399 (408)
||+||.|+..||++||++|++||+++|++++.+++ ++++|+...++..+|++||++|||||||+||.+ |||+||| .
T Consensus 317 TPgGL~~~~~wg~lry~~~~afla~~ya~~l~~~~~~~~~c~~~~~~~~~~~~~a~~Qi~yiLG~Np~~~syvvG~G~n~ 396 (498)
T PLN02613 317 TPGGLLFTRDSSNLQYVTTATTVLFIYSKTLTKAGVGGIQCGSAQFSASQIRNFAKSQVDYILGNNPMKMSYMVGFGTKY 396 (498)
T ss_pred CCCceEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHhHHHhcCCCCCCCcceeccCCCC
Confidence 99999999999999999999999999999987655 679998877788999999999999999999999 9999999 5
Q ss_pred CCCCCCCCC
Q 015354 400 TEFPEEDSS 408 (408)
Q Consensus 400 ~~~Phh~~~ 408 (408)
|+|||||.+
T Consensus 397 P~~pHHR~a 405 (498)
T PLN02613 397 PTQIHHRGS 405 (498)
T ss_pred CCccccccc
Confidence 899999975
No 10
>PLN02345 endoglucanase
Probab=100.00 E-value=1.2e-104 Score=814.76 Aligned_cols=372 Identities=43% Similarity=0.790 Sum_probs=343.6
Q ss_pred HHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHHHHHHccccc--Cc
Q 015354 33 ALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKM--GP 110 (408)
Q Consensus 33 ~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~~~~--~~ 110 (408)
+|++||+||++||||++ +.++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++||++.| .+
T Consensus 1 aL~~sl~Fy~aQrsG~l-~~~~~~Wrgds~l~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~t~L~w~~~e~~~~~~~~~ 79 (469)
T PLN02345 1 ALKIALQFFDIQKSGKL-ENNPIPWRGDSALLDGSDAGLDLSKGMYDAGDHMKFGFPMAFTATVLSWSILEYGDQMNAAN 79 (469)
T ss_pred CHHHHHHHHHHhcCCCC-ccCCCCccccccccccccccCcCCCCceeCCCCceeCchhHHHHHHHHHHHHHhhhhhhccc
Confidence 58999999999999999 7799999999999999999999999999999999999999999999999999999999 89
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccc
Q 015354 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (408)
Q Consensus 111 ~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vf 190 (408)
++|+||||||||+|||||||+. +|+||+|||++++||.+|++||+++.+||+|.|+.++|||++|+++|||||+|||||
T Consensus 80 ~~~~~ldelkw~~Dyllk~~~~-~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~~~~~~pgsd~a~~~AAAlA~as~vf 158 (469)
T PLN02345 80 QLDSAKDSLKWITDYLINAHPS-ENVLYIQVGDPKLDHKCWERPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVF 158 (469)
T ss_pred chHHHHHHHhHHHHHHHHhcCC-CCeEEEEecCCCCCcccCCChhhcCCcceEEecCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHH-----cC
Q 015354 191 RKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS-----VG 265 (408)
Q Consensus 191 k~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~-----~~ 265 (408)
|++||+||++||++||++|+||+++|+.|..+++. .+++|+| ++|.||++|||+|||+||||++|+++++. +.
T Consensus 159 k~~D~~YA~~lL~~Ak~ly~fa~~~~g~y~~~~~~-~~~~Y~s-~~~~DEl~WAAawLy~ATgd~~Yl~~~~~~~~~~~~ 236 (469)
T PLN02345 159 KSSDSTYSDTLLKHAKQLFNFADKYRGSYSESIPE-VQDYYNS-TGYGDELLWAASWLYHATGDKTYLAYVTGKNGKEFA 236 (469)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCCCc-cCCCCCC-cccccHHHHHHHHHHHHhCCHHHHHHHHhhhhhhhc
Confidence 99999999999999999999999999999877665 6789999 99999999999999999999999999952 22
Q ss_pred CCCCCccccccchhHHHHHHHhhhccccc-------chhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecCCCCchH
Q 015354 266 DDGGTDVFSWDNKFAGAHVLLARGALLNR-------DKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKMPESNLQ 338 (408)
Q Consensus 266 ~~~~~~~~~Wd~~~~~~~~lla~~~~~~~-------~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~ 338 (408)
.......|+||+|..++++||+++...+. +..++.|++.++.++|.++++++...+++||+||+|+++||++|
T Consensus 237 ~~~~~~~~~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~TpgGl~~~~~wgslr 316 (469)
T PLN02345 237 DWGSPTWFSWDDKLAGTQVLLSRLTFFGPKGASNTVNSGLQMYKKTAEAVMCGLLPDSPTATTSRTDGGLIWVSEWNALQ 316 (469)
T ss_pred ccCCCceecCcchHHHHHHHHHHHhhccCccccchhhHHHHHHHHHHHHHHHHhcCCCCCccccccCCeeEEeCCCchHH
Confidence 22223569999999999999998754321 34578999999999999998876557899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc-cccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCCC
Q 015354 339 YVTSISFLLTTYAKYMRATK-HYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDSS 408 (408)
Q Consensus 339 ~~~n~a~l~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~~ 408 (408)
|++|++||+++|++++..++ +.+.|+....++.+|++||++|||||||+||++ |||+||| .|+|||||.+
T Consensus 317 ya~~~afla~vya~~l~~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~A 390 (469)
T PLN02345 317 HAVNSAFLAVLYSDYMLSSGIAKLSCSGKSFKPSDLRKFAKSQADYILGKNPMKMSYLVGYGDKYPQYVHHRGA 390 (469)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHHHHHHHHHHHHhcCCCCCcceEeecCCCCCCCcccccC
Confidence 99999999999999987665 578898777889999999999999999999999 9999999 5899999964
No 11
>PLN03009 cellulase
Probab=100.00 E-value=4.2e-103 Score=810.64 Aligned_cols=384 Identities=52% Similarity=0.944 Sum_probs=351.2
Q ss_pred ccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHHHHHH
Q 015354 24 AHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLE 103 (408)
Q Consensus 24 ~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~e 103 (408)
..++++|+++|++||+||++||||++|++++++||++|++.||.+.++||+|||||||||+||++|+|+|+++|+|+++|
T Consensus 23 ~~~~~~Y~~al~~Sl~Fy~aQRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGGwyDAGD~~Ky~~p~a~s~~~L~w~~~~ 102 (495)
T PLN03009 23 ESNQHDYSDALSKSILFFEGQRSGYLPNDQRMTWRANSGLSDGWTHNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVIE 102 (495)
T ss_pred ccCchhHHHHHHHHHHHHHHccCCCCCCCCCCCCcccCcCCCCCcccccCCCcceeCCCCceeccchHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHH
Q 015354 104 YGKKM-GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAA 182 (408)
Q Consensus 104 f~~~~-~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAa 182 (408)
|++.+ .+++|+||||||||+|||||||+. +|.||+|||++.+||.+|++||+++.+|++|.|+.++|+|++++++|||
T Consensus 103 f~d~~~~~~~~diLdeikw~~D~llkm~~~-~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~is~~~p~sd~a~~~AAa 181 (495)
T PLN03009 103 FGDLMPSSELRNSLVAIRWATDYLLKTVSQ-PNRIFVQVGDPIADHNCWERPEDMDTPRTVYAVNAPNPASDVAGETAAA 181 (495)
T ss_pred hHhhCCccccHHHHHHHHHHHHHHHHcccC-cCeEEEEeCCCCCCcccCcChhhcCCCCeEEEecCCCCccHHHHHHHHH
Confidence 99999 679999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCC--CCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHH
Q 015354 183 LAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSL--GSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNF 260 (408)
Q Consensus 183 lA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~--~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~ 260 (408)
||+||||||++||+||++||++||++|+||+++|+.|.++. .....++|++++++.||++|||+|||+||||++|+++
T Consensus 182 lA~as~vfk~~D~~YA~~ll~~Ak~ly~~a~~~~g~y~~~~~~~~g~~~~Y~~~s~~~DE~~WAAawLy~aTgd~~Yl~~ 261 (495)
T PLN03009 182 LAASSMAFRSSDPGYSETLLRNAIKTFQFADMYRGAYSDNDDIKDGVCPFYCDFDGYQDELLWGAAWLRRASGDDSYLNY 261 (495)
T ss_pred HHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCccccCccccCcCCcccccHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999999999999999999997652 1224668988677999999999999999999999999
Q ss_pred HHH----cCCCCCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecCCCCc
Q 015354 261 IKS----VGDDGGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKMPESN 336 (408)
Q Consensus 261 a~~----~~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs 336 (408)
++. ++.....+.|+||+|..++.+|+++..+.+....++.|++.+|+++|.+.+++.++++++||+|++|+..|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~v~~t~~g~~~~~~~sn 341 (495)
T PLN03009 262 IENNGETLGANDNINEFGWDNKHAGLNVLVSKEVLEGNMYSLQSYKASADSFMCTLIPESSSSHVEYTPGGLIYKPGGSN 341 (495)
T ss_pred HHHhhhhhcCCCCCCCCCCccHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHhcccCCCCccccCCCCeEEeCCCCh
Confidence 976 2333344579999999999999887644332233578999999999998777667789999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCCC
Q 015354 337 LQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDSS 408 (408)
Q Consensus 337 ~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~~ 408 (408)
+||++|++||+++|++.+.+.+.+++|++...++++|+++|++|||||||+||++ ||||||| +|+|||||.+
T Consensus 342 ~~~a~~aafl~l~yA~~l~~~~~~~~~~~~~~~~~~y~~~A~~Q~dYiLG~Np~~~SYVvGyG~~~p~~pHHR~a 416 (495)
T PLN03009 342 LQHATTISFLLLVYANYLSRSSQSVNCGNLTIGPDSLRQQAKRQVDYILGDNPMGLSYMVGYSERYPQRIHHRGS 416 (495)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccccccccCcCCHHHHHHHHHHHHHHhcCCCCCCCceEecCCCCCcCchhhccc
Confidence 9999999999999999987766778899888889999999999999999999999 9999999 6899999954
No 12
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 9 GH9 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family E. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1RQ5_A 1CLC_A 3H7L_B 1K72_B 1G87_B 1GA2_A 1KFG_A 1UT9_A 2YIK_A 3RX5_A ....
Probab=100.00 E-value=9.8e-89 Score=702.24 Aligned_cols=364 Identities=40% Similarity=0.639 Sum_probs=314.4
Q ss_pred hHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCC-------cccccccceeccCCCcccccchhHHHHHHHHHH
Q 015354 29 NYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLF-------AHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWST 101 (408)
Q Consensus 29 ~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~-------~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~ 101 (408)
+|+++|++||+||++||||.+|+.++++||+++++.|+.. ..+||+|||||||||+||++|+++++++|+|++
T Consensus 1 ~Y~~~l~~sl~f~~~QR~G~~~~~~~~~w~~~s~~~d~~~~~~~~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~~~ 80 (444)
T PF00759_consen 1 NYKEALKKSLRFYYAQRSGTLPEDYAIPWRRDSCHTDGADSGPNNSGTTIDLSGGWYDAGDYGKYTFPMAYSVTMLAWSA 80 (444)
T ss_dssp -HHHHHHHHHHHHHHTBSBSTTTTTSGTTEB-BSTTTTCTCTSTTTSCEEB---SB-SSSSS-EEHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCcCCCcccccccCCcccCCCccccccccccccccccCceeecCCcceecccHHHHHHHHHHHH
Confidence 6999999999999999999999999999999998888754 456999999999999999999999999999999
Q ss_pred HHccccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHH
Q 015354 102 LEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGET 179 (408)
Q Consensus 102 ~ef~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~ 179 (408)
+|+.+.+ +|++||||||||||+|||||||++ +|.||+|||++..||..|.+||.++..|+.+.+...+|||++++++
T Consensus 81 ~e~~~~~e~~~~~~dllde~kwg~D~llkm~~~-~~~~~~qvgdg~~~h~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 159 (444)
T PF00759_consen 81 YEFFPAYESGNGIPDLLDEAKWGLDWLLKMQDS-DGTFYAQVGDGGVDHKVWGRPEIMPDDDPSYRYDAPNPGTDATAEF 159 (444)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHHHHHHHHHTBSC-TTEEEEEESTHHHHHTEESTGGGTGSGESEEEEETTB-EHHHHHHH
T ss_pred HHhHHHhhcCCcHHHHHHHHHHHHHHHHhccCC-CCceeeeccCccchhhcccCCCCCCCCCCcceEecCCCchHHHHHH
Confidence 9999999 999999999999999999999999 9999999999999999999999999999998888888999999999
Q ss_pred HHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHH
Q 015354 180 AAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYN 259 (408)
Q Consensus 180 AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~ 259 (408)
|||||+||||||++||+||++||++|+++|+||+++|+.|.++......++|++ +++.||++|||+|||++||+++|++
T Consensus 160 AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~~~~~~~~~~~~~Y~~-~~~~De~~wAA~~Ly~aTg~~~Y~~ 238 (444)
T PF00759_consen 160 AAALAAASRVFKDFDPAYAAQCLKAAKEAYAFAKKNPGVYSDNPQPNGGGFYNS-SGYEDELAWAAAELYRATGDESYLD 238 (444)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHSTTHGGGTSTCTTTTTSHC-S-SHHHHHHHHHHHHHHHT-HHHHH
T ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCCCcccCCcccccCCcccC-CCcccHHHHHHHHHHHhcCcHHHHH
Confidence 999999999999999999999999999999999999999987764457899999 9999999999999999999999999
Q ss_pred HHHHcCC-C---C--CCccccccchhHHHHHHHhhhccccc--chhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceec
Q 015354 260 FIKSVGD-D---G--GTDVFSWDNKFAGAHVLLARGALLNR--DKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYK 331 (408)
Q Consensus 260 ~a~~~~~-~---~--~~~~~~Wd~~~~~~~~lla~~~~~~~--~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~ 331 (408)
+++++.. . . ....++|+++..+++++|++...... +..++.+++.++.+++...+. +...+.++|+|++|.
T Consensus 239 ~a~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~ 317 (444)
T PF00759_consen 239 YAKEYYDDLEASQWSNEWSFSWDNKAAGAQLLLAKLTNDDPSRDAAREQYKSAADKFLNKWLND-GYGSVPYTPGGLAWI 317 (444)
T ss_dssp HHHHHCCTSSBSTTSSSSSSCTTBSHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHHS-TTTBSEBCTTSSBES
T ss_pred HHHHhHHhhcccccccccccchhhhhhhhhHHHHhcccchhhhHHHHHHHHHHHHHHHHHHhhc-cCCCcccCccccccc
Confidence 9999521 1 1 12479999999999998887632221 224678999999999877654 223578899999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCC
Q 015354 332 MPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDS 407 (408)
Q Consensus 332 ~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~ 407 (408)
..|||+++++|.+||++++.++. .+++.+|+++|++|||||||+||++ |||||+| +|+|||||.
T Consensus 318 ~~WGs~~~~~~~a~l~~~~~~~~------------~~~~~~y~~~a~~qldyiLG~Np~~~SyV~G~G~~~p~~pHHr~ 384 (444)
T PF00759_consen 318 YEWGSNRYAANAAFLALAYAKYD------------LTGDQEYRDFAQSQLDYILGRNPFGQSYVTGYGENSPQHPHHRA 384 (444)
T ss_dssp ESTTHHHHHHHHHHHHHHHHHTC------------HCHHHHHHHHHHHHHHHHHTTSTT--BSBTTSSSSBBSS-B-HH
T ss_pred cCCCccHHHHHHHHHHHHHHhcc------------cCChHHHHHHHHHHhhhhcCcCCCCceeeecCCCCCCCCCcCch
Confidence 99999999999999999988540 0467899999999999999999999 9999999 689999995
No 13
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=97.28 E-value=0.013 Score=59.11 Aligned_cols=147 Identities=18% Similarity=0.100 Sum_probs=96.4
Q ss_pred CCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhh-ccCCC-CceEEeeCCCCCCCCCCCCCCCCCC
Q 015354 82 DNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKC-ATATP-GKLYVGVGDPNADHKCWERPEDMDT 159 (408)
Q Consensus 82 D~~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~-~~~~~-g~~y~qvg~~~~dh~~w~~Pe~~~~ 159 (408)
|..|++..++..+..++.++..+ +.+..|+.++-+++||.+- .++ + |++++.+.. | +.|.+.
T Consensus 47 ~~~k~~~~~ar~i~~~a~a~~~~------~~~~~l~~A~~~~~fl~~~~~d~-~~Gg~~~~~~~---~----g~~~~~-- 110 (384)
T cd00249 47 DTDRRLWLQARQVYCFAVAYLLG------WRPEWLEAAEHGLEYLDRHGRDP-DHGGWYFALDQ---D----GRPVDA-- 110 (384)
T ss_pred CCCCeEEEecHHHHHHHHHHHhc------CChhHHHHHHHHHHHHHHhCcCC-CCCCEEEEEcC---C----CCCccc--
Confidence 45699999999999999887665 4577899999999999994 454 5 888888741 1 122221
Q ss_pred ccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc----CCCCC-CCCCCCcccccCCC
Q 015354 160 VRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY----RGAYS-DSLGSAVCPFYCSY 234 (408)
Q Consensus 160 ~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~----p~~~~-~~~~~~~~~~Y~s~ 234 (408)
. +....-+-++.||+.++++.. || ++|+.|++++++..++ .+.+. ...++ .+.+.+
T Consensus 111 -~---------~~l~~~a~~l~ala~~~~at~--d~----~~l~~A~~~~~~l~~~~~~~~g~~~~~~~~~--~~~~~~- 171 (384)
T cd00249 111 -T---------KDLYSHAFALLAAAQAAKVGG--DP----EARALAEETIDLLERRFWEDHPGAFDEADPG--TPPYRG- 171 (384)
T ss_pred -c---------cchHHHHHHHHHHHHHHHhcC--CH----HHHHHHHHHHHHHHHHhccCCCcccCCCCCC--CCCCCC-
Confidence 0 112334667888888889874 45 4556666666666654 12222 11111 112222
Q ss_pred CccchHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 235 SGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 235 ~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
.+...-++.|.+.|+.+||++.|++.+++
T Consensus 172 ~~~~~h~~~all~l~~~tgd~~~~~~A~~ 200 (384)
T cd00249 172 SNPHMHLLEAMLAAYEATGEQKYLDRADE 200 (384)
T ss_pred CChhHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 22223347789999999999999998876
No 14
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=96.58 E-value=0.4 Score=48.36 Aligned_cols=120 Identities=17% Similarity=0.159 Sum_probs=76.9
Q ss_pred HHHHHHHHHHh-hccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHH
Q 015354 118 AIRWATDYLLK-CATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPR 196 (408)
Q Consensus 118 e~kwg~d~llk-~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~ 196 (408)
+++-.++|++. +.+...|+++..+.. | +.|.+ + .+.++.. +.+.-++|.+++++. ++
T Consensus 15 ~~~~~~~fw~~~~~d~~~gg~~~~l~~---~----g~~~~-~-~k~~~~~----------ar~i~~~a~a~~~~~--~~- 72 (384)
T cd00249 15 LLEDLLPFWLEAGLDREAGGFFECLDR---D----GQPFD-T-DRRLWLQ----------ARQVYCFAVAYLLGW--RP- 72 (384)
T ss_pred HHHHHHHHHHhcCCCCCCCCeEEEECC---C----CCCCC-C-CCeEEEe----------cHHHHHHHHHHHhcC--Ch-
Confidence 34567777777 444447889998864 2 34443 2 3446542 577889999999985 33
Q ss_pred HHHHHHHHHHHHHHHHHHc---C--CCCCCCCCCCcccccCCCCccch--HHHHHHHHHHHHcCChhHHHHHHH
Q 015354 197 YASLLLRTAKNVLQFAMQY---R--GAYSDSLGSAVCPFYCSYSGYKD--ELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 197 ~A~~~l~~A~~~~~~a~~~---p--~~~~~~~~~~~~~~Y~s~~~~~D--e~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
++++.|++.++|..++ + |.+....+..+.+.-.. ..-.| -+++|.+++|++||++.|++.+++
T Consensus 73 ---~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~~~g~~~~~~-~~l~~~a~~l~ala~~~~at~d~~~l~~A~~ 142 (384)
T cd00249 73 ---EWLEAAEHGLEYLDRHGRDPDHGGWYFALDQDGRPVDAT-KDLYSHAFALLAAAQAAKVGGDPEARALAEE 142 (384)
T ss_pred ---hHHHHHHHHHHHHHHhCcCCCCCCEEEEEcCCCCCcccc-cchHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4788899999999986 2 33322211001111111 11122 357899999999999999999987
No 15
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms]
Probab=95.91 E-value=0.06 Score=53.19 Aligned_cols=114 Identities=21% Similarity=0.264 Sum_probs=80.7
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccc
Q 015354 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (408)
Q Consensus 111 ~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vf 190 (408)
.-|.++..+|=-+||+++-+++ +|..=. .|..+.+|-|...-. .|| +|-+|+.|+.||
T Consensus 239 d~~~~~~dVK~sldym~~~rfp-sGNyP~--------------s~~~~~drLVhWcHG-ApG------v~~~L~kAy~VF 296 (403)
T KOG2787|consen 239 DQPALLKDVKGSLDYMIQNRFP-SGNYPS--------------SEGNKRDRLVHWCHG-APG------VAYTLAKAYQVF 296 (403)
T ss_pred cchhHHHhhhhHHHHHHHccCC-CCCCCc--------------ccCCCcceeeeeccC-Cch------HHHHHHHHHHHh
Confidence 3344788999999999999998 763211 133345676665421 233 577899999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcC--CCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHHc
Q 015354 191 RKGDPRYASLLLRTAKNVLQFAMQYR--GAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV 264 (408)
Q Consensus 191 k~~D~~~A~~~l~~A~~~~~~a~~~p--~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~~ 264 (408)
+ ..+|-+...++|.-.|+..--.+ |.-+.. ++ + ..+=+-|||+|+|.+|+-.|+.|
T Consensus 297 ~--Eekyl~aa~ecadvVW~rGlLkkg~GichGv----aG------N------aYvFLsLyRLT~d~kYlyRA~kF 354 (403)
T KOG2787|consen 297 K--EEKYLEAAMECADVVWKRGLLKKGVGICHGV----AG------N------AYVFLSLYRLTGDMKYLYRAKKF 354 (403)
T ss_pred h--HHHHHHHHHHHHHHHHHhhhhhcCCcccccc----cC------c------hhhhHhHHHHcCcHHHHHHHHHH
Confidence 8 57899999999999999765444 433321 11 1 34567899999999999998875
No 16
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=95.12 E-value=0.17 Score=53.98 Aligned_cols=150 Identities=15% Similarity=0.123 Sum_probs=86.2
Q ss_pred ccceeccCCCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCC-CCCCCCCC
Q 015354 74 TGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDP-NADHKCWE 152 (408)
Q Consensus 74 ~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~-~~dh~~w~ 152 (408)
.|.++.-.|.+|+.--.+.+ +..- +-+.+++.+..-+|+|+++|.+ ||.+-...... ......|.
T Consensus 53 ~~~~~~~~~~g~wl~a~a~~-------~~~~------~D~~l~~~~d~~V~~l~~~Q~~-dGYl~~~~~~~~~~~~~~w~ 118 (520)
T PF07944_consen 53 PGWWFRGHDVGKWLEAAAYA-------YAYT------GDPELKAKADEIVDELAAAQQP-DGYLGTYPEERNFNPDDRWA 118 (520)
T ss_pred CCCccCCCcHHHHHHHHHHH-------HHHC------CCHHHHHHHHHHHHHHHHhccC-CceecccccccccccccCCC
Confidence 34445555666665443333 2222 3378999999999999999998 99543222211 01112354
Q ss_pred CCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccC
Q 015354 153 RPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYC 232 (408)
Q Consensus 153 ~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~ 232 (408)
+ + .-..|.+ +.+..+|-..++.-.+ +++|+.|+++-+|....-..+..... ....+.
T Consensus 119 ~--~---~he~Y~~----------~~ll~gl~~~y~~tG~------~~~L~v~~k~ad~~~~~~~~~~~~~~--~~~~~~ 175 (520)
T PF07944_consen 119 P--D---MHELYCL----------GKLLEGLIDYYEATGN------ERALDVATKLADWVYRRLSRLGPEPG--QKMGYP 175 (520)
T ss_pred C--C---ccceehH----------hHHHHHHHHHHHHHCc------HHHHHHHHHHHHHHHHHhccCCHHHh--hccccc
Confidence 4 1 1224432 3444555555555332 48888999988888332111111100 111222
Q ss_pred CCCccchHHHHHHHHHHHHcCChhHHHHHHHc
Q 015354 233 SYSGYKDELLWGAAWLFRATNDVTYYNFIKSV 264 (408)
Q Consensus 233 s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~~ 264 (408)
. .-++..+-++||+.|||+.||+.|+.|
T Consensus 176 ~----~~~i~~~l~~LY~~Tgd~~yL~lA~~f 203 (520)
T PF07944_consen 176 E----HGGINEALVRLYEITGDERYLDLAEYF 203 (520)
T ss_pred c----cchHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 2 135679999999999999999999885
No 17
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=93.68 E-value=0.89 Score=46.37 Aligned_cols=146 Identities=20% Similarity=0.205 Sum_probs=71.9
Q ss_pred hhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCC--CCceEEeeCCCCCCCCCCCCCCCCCCccceEEcC
Q 015354 90 MAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATAT--PGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVS 167 (408)
Q Consensus 90 ~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~--~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~ 167 (408)
+++-+..++-+|+.-.+. +...|..|+.++--.+++++-.++. .|+|+=++.+. + .-.-++
T Consensus 90 ~aw~~la~l~aye~t~~~-~~~~~~yL~~A~~i~~~~~~~wd~~~cgGGi~W~~~~~-----------~---~~~~~K-- 152 (370)
T PF03663_consen 90 NAWWALALLRAYELTGDQ-PSDNPKYLDLAKEIFDFLISGWDDTSCGGGIWWSIDDT-----------N---SGYDYK-- 152 (370)
T ss_dssp HHHHHHHHHHHHHHH--H------HHHHHHHHHHHHHHHTB-SGG-GS-BEEET------------------TEEEEE--
T ss_pred HHHHHHHHHHHHHhhCCC-cchHHHHHHHHHHHHHHHHHhcCCccCCCCcccccccc-----------C---CCCCcc--
Confidence 444444444444332211 2445689999999999999777763 15555443221 1 122233
Q ss_pred CCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHH----cCC--CCCCCCCC-CcccccCCCCcc---
Q 015354 168 ASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQ----YRG--AYSDSLGS-AVCPFYCSYSGY--- 237 (408)
Q Consensus 168 ~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~----~p~--~~~~~~~~-~~~~~Y~s~~~~--- 237 (408)
+ +-..+.++...|.-+++-+ |+ ++|+.|++.|+|..+ .|. .+.+.+.. ..+...+. ..|
T Consensus 153 --n--a~sN~~~~~laarL~~~t~--~~----~Yl~~A~~~~~W~~~~~L~d~~~g~v~Dg~~~~~~c~~~~~-~~~TYN 221 (370)
T PF03663_consen 153 --N--AISNGPAAQLAARLYRITG--DQ----TYLDWAKKIYDWMRDSGLIDPSTGLVYDGINIDGNCTNINK-TKWTYN 221 (370)
T ss_dssp --E--HHHHHHHHHHHHHHHHHH----H----HHHHHHHHHHHHHHH-HHB--TTS-B--EE-TTSSS-B-TT----HHH
T ss_pred --c--ccchHHHHHHHHHHHHhcC--Ch----HHHHHHHHHHHHhhcceeEECCCcEEEeCCccCCCCCcCCC-ceechH
Confidence 1 2223344444444444432 22 599999999999998 233 33332211 01111111 222
Q ss_pred chHHHHHHHHHHHHcCCh-hHHHHHHH
Q 015354 238 KDELLWGAAWLFRATNDV-TYYNFIKS 263 (408)
Q Consensus 238 ~De~~wAA~~Ly~aTgd~-~Yl~~a~~ 263 (408)
.--++-|+++||++|+++ +|++.+.+
T Consensus 222 qG~~l~a~~~Ly~~T~~~~~yl~~A~~ 248 (370)
T PF03663_consen 222 QGVFLGAAAYLYNATNDEQTYLDRAEK 248 (370)
T ss_dssp HHHHHHHHHHHHHHH--H-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccHHHHHHHH
Confidence 234788999999999777 99999987
No 18
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=93.55 E-value=0.23 Score=53.83 Aligned_cols=84 Identities=24% Similarity=0.226 Sum_probs=56.7
Q ss_pred chHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc--CCC-CCCCCCCCcccccCCCCccchHHHHHHHHHH
Q 015354 173 SDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY--RGA-YSDSLGSAVCPFYCSYSGYKDELLWGAAWLF 249 (408)
Q Consensus 173 s~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~--p~~-~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly 249 (408)
|+.-|.+++|||-|+++|.+ | ++++.|+++.+|..++ .+. .+.... +...+..-..+.--++||.+.||
T Consensus 410 t~wNglmi~aLa~a~~~~~d--~----~~l~~A~~~~~fi~~~l~~~rl~~~~~~--G~a~~~g~leDYA~~i~gll~ly 481 (667)
T COG1331 410 TDWNGLMIAALAEAGRVLGD--P----EYLEAAERAADFILDNLYVDRLLRRYRG--GEAAVAGLLEDYAFLILGLLALY 481 (667)
T ss_pred eccHHHHHHHHHHHHHHcCC--h----HHHHHHHHHHHHHHHhhcccchheeeec--CcccccccchhHHHHHHHHHHHH
Confidence 46678999999999999975 3 5788888888888765 111 111000 11111110122234799999999
Q ss_pred HHcCChhHHHHHHHc
Q 015354 250 RATNDVTYYNFIKSV 264 (408)
Q Consensus 250 ~aTgd~~Yl~~a~~~ 264 (408)
.+|++..||+.|+++
T Consensus 482 e~t~d~~yL~~A~~L 496 (667)
T COG1331 482 EATGDLAYLEKAIEL 496 (667)
T ss_pred HhhCcHHHHHHHHHH
Confidence 999999999999883
No 19
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=92.75 E-value=0.47 Score=47.50 Aligned_cols=141 Identities=24% Similarity=0.240 Sum_probs=83.3
Q ss_pred ccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhcc-CCCCceEEeeCCCCCCCCCCCCCCCCCCccce
Q 015354 85 KFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCAT-ATPGKLYVGVGDPNADHKCWERPEDMDTVRSV 163 (408)
Q Consensus 85 Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~-~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~ 163 (408)
|++.-++=-+++.+.++. + +.|+.++-++.+++||.+... .++|.+++.+-++ + |.+. .
T Consensus 18 k~~~~q~R~~~~fa~a~~-~------g~~~~l~~A~~~~~fl~~~~~D~~~Gg~~~~~~~~-------~-~~~~--~--- 77 (346)
T PF07221_consen 18 KRLWVQARQLYTFARAYR-L------GRPEYLELAEHGFDFLRKHFRDPEYGGWYRSLDDG-------G-PLDP--Q--- 77 (346)
T ss_dssp EEHHHHHHHHHHHHHHHH-T------TSHHHHHHHHHHHHHHHHTTBTTTTSSBSSEEETT-------E-EEE-------
T ss_pred ceeeeeHHHHHHHHHHHh-c------CchhHHHHHHHHHHHHHHhcccCCCCCEEEEeCCC-------C-CCcc--c---
Confidence 577777777777776665 4 478899999999999997753 4368888777331 1 1111 1
Q ss_pred EEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc---C--CCCCCCCCCCcccccCCCCccc
Q 015354 164 YSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY---R--GAYSDSLGSAVCPFYCSYSGYK 238 (408)
Q Consensus 164 ~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~---p--~~~~~~~~~~~~~~Y~s~~~~~ 238 (408)
.+.-.++-+.+|+|. ....-++ +.++.|++++++..++ | +.|....+...... ....
T Consensus 78 ---------~~~Y~~af~l~ala~-~~~tg~~----~~~~~A~~~~~~l~~~~~d~~~g~~~~~~~~~~~~~----r~~n 139 (346)
T PF07221_consen 78 ---------KDLYDQAFALLALAE-ARATGDP----EALELAEQTLEFLERRFWDPEGGGYRESFDPDWSPP----RGQN 139 (346)
T ss_dssp ---------EEHHHHHHHHHHHHH-HHCTT-T----THHHHHHHHHHHHHHHTEETTTTEE--EETTTSSCB----EEHH
T ss_pred ---------cchHHHHHHHHHHHH-HHHhCCh----hHHHHHHHHHHHHHHHhcccccCcceeccCCccccC----CCCC
Confidence 122223333444443 2222344 4477888888888875 2 22322111001010 0123
Q ss_pred h--HHHHHHHHHHHHcCChhHHHHHHH
Q 015354 239 D--ELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 239 D--e~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
+ -++-|.+.|+++|++..|++.+++
T Consensus 140 ~~mhl~eA~l~l~~~~~~~~~~~~a~~ 166 (346)
T PF07221_consen 140 PHMHLLEAFLALYEATGDPRYLDRAEE 166 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 3 357788999999999999999987
No 20
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=91.91 E-value=11 Score=41.35 Aligned_cols=159 Identities=15% Similarity=0.172 Sum_probs=82.8
Q ss_pred hhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCccc---ccchhHHHHHHHHHHHHc
Q 015354 28 PNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKF---NFPMAFTTTMLSWSTLEY 104 (408)
Q Consensus 28 ~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky---~~~~a~s~~~L~~~~~ef 104 (408)
..+...+++++.|...++. . +....|+... . .. -.|||-=. +..+. +--++.++..|+ ..
T Consensus 325 ~~~~~~l~ka~~wL~~~Q~-~---~~~gdw~~~~--~-----~~-~~GGW~fs-~~~~~~pd~d~Ta~~l~AL~----~~ 387 (634)
T cd02892 325 PEFDPALKKALDWLLESQI-L---DNPGDWKVKY--R-----HL-RKGGWAFS-TANQGYPDSDDTAEALKALL----RL 387 (634)
T ss_pred ccchHHHHHHHHHHHHHHc-C---CCCCchhhhC--C-----CC-CCCCCCCC-CCCCCCCCcCchHHHHHHHH----Hh
Confidence 3788899999999987776 1 1122343111 0 00 15666211 11111 113455544442 22
Q ss_pred ccccCccHHHHHHHHHHHHHHHHhhccCCCCceEE-eeCCCCCCCCCC---CCCCCCCCccceEEcCCCCccchHHHHHH
Q 015354 105 GKKMGPELQNARAAIRWATDYLLKCATATPGKLYV-GVGDPNADHKCW---ERPEDMDTVRSVYSVSASNPGSDVAGETA 180 (408)
Q Consensus 105 ~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~-qvg~~~~dh~~w---~~Pe~~~~~R~~~~~~~~~pgs~~~~~~A 180 (408)
......+.+...+.++=++|||++||.+ ||++.. ..+. .+ .| ..|-++... ..+ +.|..+.|+.+.
T Consensus 388 ~~~~~~~~~~~~~~i~~Av~wLl~~Qn~-dGgf~~y~~~~---~~-~~~~~~~p~e~~g~---~~~--d~~~~~~Ta~~l 457 (634)
T cd02892 388 QELPPFGEKVSRERLYDAVDWLLGMQNS-NGGFAAFEPDN---TY-HWLENLNPFEDFGD---IMI--DPPYVECTGSVL 457 (634)
T ss_pred hccCCcchhhHHHHHHHHHHHHHhccCC-CCCEeeecCCC---ch-hhHhhcCchhhhcc---ccc--CCCCcchHHHHH
Confidence 2111112334457889999999999999 998642 1111 00 11 113221100 011 124567788777
Q ss_pred HHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 015354 181 AALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRG 217 (408)
Q Consensus 181 AalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~ 217 (408)
.+|+.....+. .+..+..+..+++-+|+.++..
T Consensus 458 ~aL~~~~~~~~----~~r~~i~~~i~rAv~~L~~~Q~ 490 (634)
T cd02892 458 EALGLFGKLYP----GHRREIDPAIRRAVKYLLREQE 490 (634)
T ss_pred HHHHHhcccCc----chHHHHHHHHHHHHHHHHHccC
Confidence 77777665543 2223566778888899988644
No 21
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase. This model identifies 2,3-oxidosqualene cyclases from Stigmatella aurantiaca which produces cycloartenol, and Gemmata obscuriglobus and Methylococcus capsulatus which each produce the closely related sterol, lanosterol.
Probab=87.56 E-value=40 Score=37.04 Aligned_cols=90 Identities=14% Similarity=0.100 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHH
Q 015354 117 AAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPR 196 (408)
Q Consensus 117 de~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~ 196 (408)
+.++=++|||+.||.. ||++..--.+....-..+.+|.+.-.. ..+ +.|..+.|+.+.-+|+...... +.
T Consensus 400 ~~l~~av~~Ll~~Qn~-dGGw~~y~~~~~~~~l~~~~~~~~f~~---~~~--d~~~~d~Ta~~l~aL~~~~~~~----~~ 469 (634)
T TIGR03463 400 ARLQDAVEFILSRQNE-DGGFGTYERQRGPRVLELLNPSEMFST---CMT--DVSYVECTSSCLQALAAWRKHH----PH 469 (634)
T ss_pred HHHHHHHHHHHHhcCC-CCCEeccCCCCcHHHHhcCChHHhhcc---ccc--CCCcCcHHHHHHHHHHHHhhcC----cc
Confidence 5677799999999999 897653222211110112344432100 111 1245577887777887765332 32
Q ss_pred H-HHHHHHHHHHHHHHHHHcC
Q 015354 197 Y-ASLLLRTAKNVLQFAMQYR 216 (408)
Q Consensus 197 ~-A~~~l~~A~~~~~~a~~~p 216 (408)
. +.++.++.+++-+|..+.+
T Consensus 470 ~~~~~i~~ai~rav~~L~~~Q 490 (634)
T TIGR03463 470 VPDGRITRAISRGVRFLRSRQ 490 (634)
T ss_pred hhhhHHHHHHHHHHHHHHHhc
Confidence 2 3455556667777887653
No 22
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=86.10 E-value=7.4 Score=39.64 Aligned_cols=131 Identities=22% Similarity=0.250 Sum_probs=62.0
Q ss_pred ccchHHHH---HHHHHHHHcCCh-----hHHHHHHHc------C-CCC-CCccccccc---------h---hHH-HHHHH
Q 015354 236 GYKDELLW---GAAWLFRATNDV-----TYYNFIKSV------G-DDG-GTDVFSWDN---------K---FAG-AHVLL 286 (408)
Q Consensus 236 ~~~De~~w---AA~~Ly~aTgd~-----~Yl~~a~~~------~-~~~-~~~~~~Wd~---------~---~~~-~~~ll 286 (408)
.|.||..| |.+.+|..||++ +||+.|+.. + ... -...+-|.. | ..+ +..+.
T Consensus 85 ~~~DD~aw~~la~l~aye~t~~~~~~~~~yL~~A~~i~~~~~~~wd~~~cgGGi~W~~~~~~~~~~~Kna~sN~~~~~la 164 (370)
T PF03663_consen 85 RYYDDNAWWALALLRAYELTGDQPSDNPKYLDLAKEIFDFLISGWDDTSCGGGIWWSIDDTNSGYDYKNAISNGPAAQLA 164 (370)
T ss_dssp -BHHHHHHHHHHHHHHHHHH--H-----HHHHHHHHHHHHHHHTB-SGG-GS-BEEET----TEEEEEEHHHHHHHHHHH
T ss_pred CccChHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHHHhcCCccCCCCccccccccCCCCCcccccchHHHHHHH
Confidence 36677655 678889999999 999999982 1 111 123455662 2 122 22333
Q ss_pred hhhcc-cccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecC--------CCCchHHHHHHHHHHHHHHHHHHhc
Q 015354 287 ARGAL-LNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKM--------PESNLQYVTSISFLLTTYAKYMRAT 357 (408)
Q Consensus 287 a~~~~-~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~--------~WGs~~~~~n~a~l~~~~~~~~~~~ 357 (408)
++++. +++ +.|.+.|++..+ |+..+ +.--...|+++-. .-+...+.-|++.++.....+-..
T Consensus 165 arL~~~t~~----~~Yl~~A~~~~~-W~~~~---~L~d~~~g~v~Dg~~~~~~c~~~~~~~~TYNqG~~l~a~~~Ly~~- 235 (370)
T PF03663_consen 165 ARLYRITGD----QTYLDWAKKIYD-WMRDS---GLIDPSTGLVYDGINIDGNCTNINKTKWTYNQGVFLGAAAYLYNA- 235 (370)
T ss_dssp HHHHHHH------HHHHHHHHHHHH-HHHH----HHB--TTS-B--EE-TTSSS-B-TT---HHHHHHHHHHHHHHHHH-
T ss_pred HHHHHhcCC----hHHHHHHHHHHH-Hhhcc---eeEECCCcEEEeCCccCCCCCcCCCceechHHHHHHHHHHHHHHh-
Confidence 34321 222 246666666442 22210 0100122444421 123456777887776655555332
Q ss_pred ccccccCCcccChh-hhHHHHHhcccccc
Q 015354 358 KHYFTCGNMVVNPG-LLTRPRKKTGGLYI 385 (408)
Q Consensus 358 ~~~~~~~~~~~~~~-~y~~~a~~qidYiL 385 (408)
++.+ .|++.|.+-+++.+
T Consensus 236 ----------T~~~~~yl~~A~~la~~~~ 254 (370)
T PF03663_consen 236 ----------TNDEQTYLDRAEKLADAAI 254 (370)
T ss_dssp ----------H--H-HHHHHHHHHHHHHH
T ss_pred ----------cCCccHHHHHHHHHHHHHH
Confidence 2233 88888888887775
No 23
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=83.86 E-value=45 Score=32.52 Aligned_cols=24 Identities=21% Similarity=0.318 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHH
Q 015354 240 ELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 240 e~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
-.+|+-+.||++|+++.|++.+++
T Consensus 143 Gi~~~L~~l~~~t~d~~~l~~A~~ 166 (321)
T cd04791 143 GIALFLLRLYKATGDSRYLELAEE 166 (321)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHH
Confidence 478999999999999999998886
No 24
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]
Probab=83.64 E-value=17 Score=37.20 Aligned_cols=125 Identities=22% Similarity=0.235 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhccccc
Q 015354 112 LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFR 191 (408)
Q Consensus 112 ~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk 191 (408)
.++.++.+.+|++||-+.+...+|+-|.-+... +.|.+.+ -++=..+=+.||+|+.+-
T Consensus 73 ~~~~~~~v~hG~~y~~~~~R~~~gg~~~~~~~d-------g~~~Dat--------------~d~Y~haFallA~A~~a~- 130 (388)
T COG2942 73 RGPWLDAVAHGIAYLARVGRDPEGGWYFALDND-------GGPVDAT--------------KDLYGHAFALLAAAHAAT- 130 (388)
T ss_pred CccHHHHHHhHHHHHHhcCcCCCCCeEEEecCC-------CCccccc--------------HhHHHHHHHHHHHHHHHh-
Confidence 455899999999999999887566655555431 3454443 133344556666666332
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHH---cCC-CCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 192 KGDPRYASLLLRTAKNVLQFAMQ---YRG-AYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 192 ~~D~~~A~~~l~~A~~~~~~a~~---~p~-~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
..+.-|.++++.|.++++-... ||- .+..+.|. ..+. +|+. .--++=|=+-=|.+||++.|++.+.+
T Consensus 131 -a~~~~a~~~~~~a~~~l~~~~~~~~~pl~~~e~~~~~-~~pl-~sNp--~MHl~EA~LA~~e~~~~~~~~~~A~~ 201 (388)
T COG2942 131 -AGPPRADELLDEALDVLERRFWREEHPLGGFEEDNPG-SAPL-GSNP--HMHLLEAMLAAYEATGEKTWLDRADR 201 (388)
T ss_pred -cCChhHHHHHHHHHHHHHHHHhhhcCCcccccccCCC-CCcc-CCCc--chHHHHHHHHHHhccCchhHHHHHHH
Confidence 4677888999999888875443 232 22222221 2222 3311 11122222334678999999998876
No 25
>PLN03012 Camelliol C synthase
Probab=73.65 E-value=1.6e+02 Score=33.14 Aligned_cols=203 Identities=15% Similarity=0.168 Sum_probs=96.6
Q ss_pred chhHHHHHHHHHhhhHHhcCCC-CCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHH-HHHHHHHHHc
Q 015354 27 NPNYREALAKSLLFFQGQRSGR-LPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTT-TMLSWSTLEY 104 (408)
Q Consensus 27 ~~~Y~~~l~~sl~fy~~QR~G~-l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~-~~L~~~~~ef 104 (408)
.+.+...|++++.|...+..-. .|.+.+...|+. .-|.=.--+...||=|.=| +|.++ ..|+++. .
T Consensus 434 ~~~~~~~l~kA~~~L~~~Qv~~~~~gdw~~~~r~~---~~GgW~Fs~~~~gyp~sD~-------TAe~Lka~lll~~--~ 501 (759)
T PLN03012 434 SNEIPDVLRRGHDFIKNSQVGENPSGDFKNMYRHI---SKGAWTFSDRDHGWQASDC-------TAEGFKCCLLFSM--I 501 (759)
T ss_pred CccchHHHHHHHHHHHHHhccCCCCChhhhhCCCC---CCCcccccCCCCCCCCCCc-------cHHHHHHHHHHHh--c
Confidence 3478999999999998777654 333323222221 1111000011233333222 22232 1222222 1
Q ss_pred cccc-CccHHHHHHHHHHHHHHHHhhccCCCCce--EEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHH
Q 015354 105 GKKM-GPELQNARAAIRWATDYLLKCATATPGKL--YVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAA 181 (408)
Q Consensus 105 ~~~~-~~~~~d~Lde~kwg~d~llk~~~~~~g~~--y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AA 181 (408)
+... +..++ .+-++=++||||.||.. +|++ |-+--+. .-..+.+|.+.-.+ + .|+ .|.++.|+.+.-
T Consensus 502 ~~~~~~~~~~--~~~l~~av~wlL~mQn~-dGGwaafe~~~~~--~~le~lnp~E~F~d--~-mid--~~y~dcTa~~l~ 571 (759)
T PLN03012 502 APDIVGPKMD--PEQLHDAVNILLSLQSK-NGGMTAWEPAGAP--EWLELLNPTEMFAD--I-VIE--HEYNECTSSAIQ 571 (759)
T ss_pred cccccccccc--HHHHHHHHHHHHhccCC-CCCEeeecCCcch--HHHHhcChhhhhcC--e-ecC--CCcccHHHHHHH
Confidence 2112 22222 36788899999999999 9976 3332221 11112344332111 1 243 356788888877
Q ss_pred HHHHhcccccCCCHHH-HHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCC----hh
Q 015354 182 ALAAASLVFRKGDPRY-ASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATND----VT 256 (408)
Q Consensus 182 alA~as~vfk~~D~~~-A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd----~~ 256 (408)
||++-...+ |.+ .++.-..-+++-+|+++.+.. -++.|++|.....=-.|.|+.=..+.|+ ..
T Consensus 572 aL~~f~~~~----~~~r~~~i~~~i~rAv~~L~~~Q~~--------DGsW~G~Wgv~y~YgT~~aL~aL~a~g~~~~~~~ 639 (759)
T PLN03012 572 ALILFKQLY----PDHRTEEINAFIKKAAEYIENIQML--------DGSWYGNWGICFTYGTWFALAGLAAAGKTFNDCE 639 (759)
T ss_pred HHHHHhhhC----cccchhhhHHHHHHHHHHHHHhcCC--------CCCCcccccccCCcHHHHHHHHHHHhCccCCCcH
Confidence 877655443 333 222233344555666654331 1334443322111135555555555553 24
Q ss_pred HHHHHHH
Q 015354 257 YYNFIKS 263 (408)
Q Consensus 257 Yl~~a~~ 263 (408)
...++.+
T Consensus 640 ~Irrav~ 646 (759)
T PLN03012 640 AIRKGVH 646 (759)
T ss_pred HHHHHHH
Confidence 5555555
No 26
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.68 E-value=21 Score=37.80 Aligned_cols=148 Identities=18% Similarity=0.227 Sum_probs=80.8
Q ss_pred cccccee----ccCCCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCce--EEeeCCCC
Q 015354 72 DLTGGYY----DAGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKL--YVGVGDPN 145 (408)
Q Consensus 72 dl~GGW~----DAGD~~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~--y~qvg~~~ 145 (408)
...|||. +--|.+|+. ...+|++..- +-|.+..-|..-+|=+-+.|++ ||.+ |.|. .
T Consensus 53 ~~r~g~~~q~f~dsdlgkwl-------ea~A~~l~~~------~dp~Lekr~D~vi~~~a~~Qde-dGYl~~~~q~---~ 115 (589)
T COG3533 53 PFRGGWETQMFWDSDLGKWL-------EAAAYSLANK------GDPELEKRIDEVVEELARAQDE-DGYLGGWFQA---D 115 (589)
T ss_pred cccccceeeeeccccHHHHH-------HHHHHHHhcC------CCHHHHHHHHHHHHHHHHhhcc-CCcccceeec---c
Confidence 3458886 223444544 3444444333 4455555566667778899998 8864 2222 2
Q ss_pred CCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 015354 146 ADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGS 225 (408)
Q Consensus 146 ~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~ 225 (408)
++...|+.=-+ -+..|.. .-.+++++| ..++ +=-.++|+-+.++=+++.+--+.-.+
T Consensus 116 ~pe~Rw~nlr~---~HelY~a---------ghLieg~va-~~qa------TGkr~lldV~~rlADhi~tvfgp~~~---- 172 (589)
T COG3533 116 FPEERWGNLRP---NHELYCA---------GHLIEGGVA-AHQA------TGKRRLLDVVCRLADHIATVFGPEED---- 172 (589)
T ss_pred Cchhhhhcccc---chHHHHh---------HHHHhhhhH-HHHh------hCcchHHHHHHHHHHhhhhhcCcccc----
Confidence 22233332111 1223321 112222222 1111 11247778888877777764332111
Q ss_pred CcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHHc
Q 015354 226 AVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV 264 (408)
Q Consensus 226 ~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~~ 264 (408)
....|+. . -|+..|-++||+.||+++||+.++.|
T Consensus 173 -q~~g~~g-H---~eielAl~~Ly~~Tg~~rYL~LA~~F 206 (589)
T COG3533 173 -QVPGYCG-H---PEIELALAELYRLTGDQRYLDLARRF 206 (589)
T ss_pred -ccccccC-C---CchhHHHHHHHHHhcChHHHHHHHHH
Confidence 2234554 2 47899999999999999999999885
No 27
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=66.72 E-value=15 Score=36.48 Aligned_cols=136 Identities=16% Similarity=0.189 Sum_probs=65.9
Q ss_pred ccchHHH-HHHHHHHHHcCChhHHHHHHHcCCC---CCCccccccchhHHHH-HHHhhhcccccchhhHHHHHHHHHHHH
Q 015354 236 GYKDELL-WGAAWLFRATNDVTYYNFIKSVGDD---GGTDVFSWDNKFAGAH-VLLARGALLNRDKNFEPYRQEAEDFIC 310 (408)
Q Consensus 236 ~~~De~~-wAA~~Ly~aTgd~~Yl~~a~~~~~~---~~~~~~~Wd~~~~~~~-~lla~~~~~~~~~~~~~~~~~ad~~~~ 310 (408)
+|..-.+ .+..++|..|||+.|++.++++... .......=|+...+-. +.+.+. +++++.+....+.++..+.
T Consensus 24 ~W~~G~~~~gl~~~~~~tgd~~~~~~a~~~~~~~~~~~~~~~~~d~~~~g~~~~~~y~~--t~d~~y~~~~~~~a~~~l~ 101 (336)
T PF07470_consen 24 DWTNGVFWYGLLEAYEYTGDERYLDYAERWADRFIEEDGSDYNLDDHDIGFLLLDLYER--TGDEKYKDAAIQAADWLLA 101 (336)
T ss_dssp SHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTTSCCGTTHHHHHHHHHHH--H-THHHHHHHHHHHHHHHH
T ss_pred CcChhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCCccCCchhhhHHHHHHHHHH--hCCHHHHHHHHHHHHHHHH
Confidence 4555644 4677899999999999999873100 0000111123233222 222222 2333333444444443332
Q ss_pred HhCCCCCCCcccccCCCceecCC------CCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccc
Q 015354 311 RILPNSPFTTTQYTQGGLMYKMP------ESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLY 384 (408)
Q Consensus 311 ~~~~~~~~~~~~~tp~Gl~~~~~------WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYi 384 (408)
. .+.++.|-++-.. |--.-| ++.-|++. +++. +++++|.+.|.+|++-.
T Consensus 102 ~---------~~~~~~G~~~~~~~~~~~~wiD~~~-M~~p~l~~-~~~~--------------tgd~~~~~~a~~q~~~~ 156 (336)
T PF07470_consen 102 R---------RPRTSDGGFWHNRPYPNQVWIDGMY-MNLPFLAW-AGKL--------------TGDPKYLDEAVRQFRLT 156 (336)
T ss_dssp T---------SCBECTGCBECTTTSTTEEETTHHH-HHHHHHHH-HHHH--------------HTGHHHHHHHHHHHHHH
T ss_pred h---------CCCCCCCccccCCCCCCceeecccc-ccHHHHHH-HHHH--------------HCCcHHHHHHHHHHHHH
Confidence 2 1222222222211 211222 35555554 3444 36889999999998766
Q ss_pred c--CCCCCC-CeeeeeC
Q 015354 385 I--RCEPNK-NVIHGWF 398 (408)
Q Consensus 385 L--G~NP~~-SfVtG~G 398 (408)
. ..+|.. -|..++.
T Consensus 157 ~~~~~d~~tGl~~h~~~ 173 (336)
T PF07470_consen 157 RKYLYDPETGLYYHGYT 173 (336)
T ss_dssp HHHHB-TTTSSBESEEE
T ss_pred HHhccCCCCCceeeccC
Confidence 5 357755 8888875
No 28
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
Probab=65.13 E-value=1.5e+02 Score=29.39 Aligned_cols=158 Identities=16% Similarity=0.166 Sum_probs=82.5
Q ss_pred hhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHHHH
Q 015354 22 ENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWST 101 (408)
Q Consensus 22 ~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~ 101 (408)
-.+-++..|.+++.+++.|.-.-+. |. +.|-- -..+.||||+. +=|.=....-|..|+.-.
T Consensus 57 y~~t~d~~y~~A~~rgld~LL~aQy---pn---GGWPQ----------f~p~~~~Y~~~---ITfND~am~~vl~lL~~i 117 (290)
T TIGR02474 57 YQQEKNAKYRDAARKGIEYLLKAQY---PN---GGWPQ----------FYPLKGGYSDA---ITYNDNAMVNVLTLLDDI 117 (290)
T ss_pred HHhcCchhHHHHHHHHHHHHHhhhC---CC---CCcCc----------ccCCcCCcccc---cccCcHHHHHHHHHHHHH
Confidence 3356778899999999987633221 11 11220 01122344431 112212222333333334
Q ss_pred HHccccc----CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHH
Q 015354 102 LEYGKKM----GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAG 177 (408)
Q Consensus 102 ~ef~~~~----~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~ 177 (408)
.++.+.| ....+.+...+.=|+|||||+|.. .|+.+.. |+-=.+...-+|+..-..+ |-|-.+.
T Consensus 118 ~~~~~~~~~~~~~~~~r~~~Ai~Rgid~ILktQ~~-~gg~~t~----------Wg~Qyd~~tl~Pa~AR~yE-~pSls~~ 185 (290)
T TIGR02474 118 ANGKDPFDVFPDSTRTRAKTAVTKGIECILKTQVV-QNGKLTV----------WCQQHDALTLQPKKARAYE-LPSLSSS 185 (290)
T ss_pred HhccCCcccccHHHHHHHHHHHHHHHHHHHHhhcc-cCCcCCc----------hhhccCccccccccccccC-Ccccccc
Confidence 4555544 334688999999999999999988 6643322 3321111111222222222 2233345
Q ss_pred HHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 015354 178 ETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (408)
Q Consensus 178 ~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~ 215 (408)
|.+..+..-=.+.+ -+ .+.+++-+.+-+|.+++
T Consensus 186 ES~~iv~~LM~~~~-ps----~~i~~ai~~A~~W~~~~ 218 (290)
T TIGR02474 186 ESVGILLFLMTQPN-PS----AEIKEAIRAGVAWFDTS 218 (290)
T ss_pred cHHHHHHHHhcCCC-CC----HHHHHHHHHHHHHHHHC
Confidence 66665554433332 22 37888888888999887
No 29
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=61.14 E-value=73 Score=31.58 Aligned_cols=98 Identities=13% Similarity=0.047 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCC
Q 015354 90 MAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSAS 169 (408)
Q Consensus 90 ~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~ 169 (408)
+|+.+.-|+-.+...|+ -....+.+++.++--++.|.+.|++ +|. ++++=+ .|+. . +
T Consensus 189 ~gW~~~Gl~~~l~~lp~-~~~~~~~~~~~~~~~~~~l~~~q~~-~G~-w~~~~~---------~~~~-----~------~ 245 (336)
T PF07470_consen 189 NGWAIYGLAEVLEYLPE-DHPERDELLEIAKKLADALARYQDE-DGL-WYQDLD---------DPDP-----G------N 245 (336)
T ss_dssp HHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHTTSTT-TSB-EBSBTT---------TTTT-----T------S
T ss_pred hhHHHHHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHhcCCC-CCC-cceecC---------CCCC-----C------C
Confidence 45555555555544443 1235678899999999999999986 775 444422 1220 0 1
Q ss_pred CccchHHHHHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHHHc
Q 015354 170 NPGSDVAGETAAALAAASLV-FRKGDPRYASLLLRTAKNVLQFAMQY 215 (408)
Q Consensus 170 ~pgs~~~~~~AAalA~as~v-fk~~D~~~A~~~l~~A~~~~~~a~~~ 215 (408)
.+-|++|+.+|.+|+.+.+. + .| .+++++.|+++|+.+.++
T Consensus 246 ~~etSatA~~a~~l~~gi~~g~--~d---~~~y~~~a~~a~~~l~~~ 287 (336)
T PF07470_consen 246 YRETSATAMFAYGLLRGIRLGL--LD---PEEYRPAAEKALEALLSN 287 (336)
T ss_dssp -BEHHHHHHHHHHHHHHHHTTS--ST---HHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHHHHcCC--Cc---cHHHHHHHHHHHHHHHhC
Confidence 12367788888888764322 2 22 457778899999999887
No 30
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=56.33 E-value=2.2e+02 Score=30.39 Aligned_cols=189 Identities=17% Similarity=0.096 Sum_probs=94.0
Q ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc--CCCCCCCCCCCc--------cc----ccCCCCccchHHH
Q 015354 177 GETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY--RGAYSDSLGSAV--------CP----FYCSYSGYKDELL 242 (408)
Q Consensus 177 ~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~--p~~~~~~~~~~~--------~~----~Y~s~~~~~De~~ 242 (408)
+..--++|.++..- -|++ +.+++.++-+...+. |.-|-.+.+... .+ .|+- .-++
T Consensus 63 g~wl~a~a~~~~~~--~D~~----l~~~~d~~V~~l~~~Q~~dGYl~~~~~~~~~~~~~~w~~~~he~Y~~-----~~ll 131 (520)
T PF07944_consen 63 GKWLEAAAYAYAYT--GDPE----LKAKADEIVDELAAAQQPDGYLGTYPEERNFNPDDRWAPDMHELYCL-----GKLL 131 (520)
T ss_pred HHHHHHHHHHHHHC--CCHH----HHHHHHHHHHHHHHhccCCceecccccccccccccCCCCCccceehH-----hHHH
Confidence 56666666666554 3665 445555555555544 333433222111 11 1211 2477
Q ss_pred HHHHHHHHHcCChhHHHHHHHcCC--------C-CCCccccccchhH---HHHHHHhhhcccccchhhHHHHHHHHHHHH
Q 015354 243 WGAAWLFRATNDVTYYNFIKSVGD--------D-GGTDVFSWDNKFA---GAHVLLARGALLNRDKNFEPYRQEAEDFIC 310 (408)
Q Consensus 243 wAA~~Ly~aTgd~~Yl~~a~~~~~--------~-~~~~~~~Wd~~~~---~~~~lla~~~~~~~~~~~~~~~~~ad~~~~ 310 (408)
=|++--|++||+++.++.+.++.+ . .......|..-+. .+.+-|.+. +++ +.|.+.|+.|+.
T Consensus 132 ~gl~~~y~~tG~~~~L~v~~k~ad~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LY~~--Tgd----~~yL~lA~~f~~ 205 (520)
T PF07944_consen 132 EGLIDYYEATGNERALDVATKLADWVYRRLSRLGPEPGQKMGYPEHGGINEALVRLYEI--TGD----ERYLDLAEYFVD 205 (520)
T ss_pred HHHHHHHHHHCcHHHHHHHHHHHHHHHHHhccCCHHHhhcccccccchHHHHHHHHHHH--hCC----HHHHHHHHHHHH
Confidence 899999999999999998887311 0 0000112333333 233333333 332 578888888875
Q ss_pred HhCCCC--CCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCC
Q 015354 311 RILPNS--PFTTTQYTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCE 388 (408)
Q Consensus 311 ~~~~~~--~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~N 388 (408)
...... ..+.....|. .. .-....++.++..++.-.+++-.. +++++|.+.+++..+-|...
T Consensus 206 ~~~~~~~~~~~~~d~~~~--~~--a~~~~~h~vr~~y~~~g~a~~y~~-----------tgd~~~~~a~~~~w~~v~~~- 269 (520)
T PF07944_consen 206 QRGFDPYDLAYGQDHLPG--RH--ANTHIGHAVRAMYLYSGAADLYEE-----------TGDEEYLDAAENFWDNVVRH- 269 (520)
T ss_pred HhCCCCCchhhcCccCCC--cc--ccceeeEEEEhhhhhhHHHHHHHH-----------hCCHHHHHHHHHHHHHHHhc-
Confidence 543221 0111111111 00 111122222222222222232111 47889999999999988763
Q ss_pred CCCCeeee-eCCC
Q 015354 389 PNKNVIHG-WFWT 400 (408)
Q Consensus 389 P~~SfVtG-~G~~ 400 (408)
.+|||| +|+.
T Consensus 270 --~~y~tGg~g~~ 280 (520)
T PF07944_consen 270 --HMYATGGIGSD 280 (520)
T ss_pred --CeeccCCCcCC
Confidence 389995 4433
No 31
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=54.44 E-value=3.3e+02 Score=29.98 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHhhccCCCCce
Q 015354 114 NARAAIRWATDYLLKCATATPGKL 137 (408)
Q Consensus 114 d~Lde~kwg~d~llk~~~~~~g~~ 137 (408)
..-+.++=++|||++||.. +|++
T Consensus 400 ~~~~~i~ra~~wLl~~Qn~-dGgw 422 (635)
T TIGR01507 400 RRRDAMTKAFRWIAGMQSS-NGGW 422 (635)
T ss_pred cchHHHHHHHHHHHHhcCC-CCCE
Confidence 3457899999999999998 8876
No 32
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins. A major virulence determinant of the plant-pathogenic enterobacterium Erwinia chrysanthemi is the production of pectate lyase enzymes that degrade plant cell walls [].; GO: 0016837 carbon-oxygen lyase activity, acting on polysaccharides, 0045490 pectin catabolic process, 0005737 cytoplasm; PDB: 2V8J_A 2V8K_A 2V8I_A.
Probab=52.58 E-value=25 Score=37.26 Aligned_cols=46 Identities=26% Similarity=0.312 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHcC--------------CCCCCccccccchhHHHHHHH
Q 015354 241 LLWGAAWLFRATNDVTYYNFIKSVG--------------DDGGTDVFSWDNKFAGAHVLL 286 (408)
Q Consensus 241 ~~wAA~~Ly~aTgd~~Yl~~a~~~~--------------~~~~~~~~~Wd~~~~~~~~ll 286 (408)
++.|.+|||++|++..|++.|...+ .....-...-|+..+.+.+.|
T Consensus 442 ~L~allEL~~atq~~~~l~lA~~~g~~l~~~~~~~GlF~~~~~h~y~r~Dd~~PlALL~L 501 (557)
T PF06917_consen 442 LLFALLELYQATQDARYLELADQVGENLFEQHFHRGLFVASPRHRYARLDDPEPLALLAL 501 (557)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHEETTEE-SSTTBSSEETT-SHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHccCceecCChhhceeccCChhhHHHHHH
Confidence 6889999999999999999997621 122223345688888777644
No 33
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=48.56 E-value=1.3e+02 Score=30.59 Aligned_cols=115 Identities=22% Similarity=0.180 Sum_probs=72.3
Q ss_pred cccceeccCCCcc----ccc----------chhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceE
Q 015354 73 LTGGYYDAGDNVK----FNF----------PMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLY 138 (408)
Q Consensus 73 l~GGW~DAGD~~K----y~~----------~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y 138 (408)
.||=||-+=|+.| -.. -.++.+..|.=..+..|+..+ ..-.+++-++=-++=|+|.|++ +|. +
T Consensus 175 ~TGL~YH~wd~~~~~~w~~~~sG~~~fWaRg~gW~~mal~d~le~lp~~~~-~r~~l~~~l~d~v~al~r~Qde-~Gl-W 251 (357)
T COG4225 175 ETGLYYHGWDEDGTMPWANNESGEPAFWARGNGWYAMALADLLELLPEDHP-DRRELLNVLRDLVDALIRYQDE-SGL-W 251 (357)
T ss_pred CcCceEEeeccCCCCccccccCCCceeeecccchHHHHHHHHHHhCCCCCc-hHHHHHHHHHHHHHHHHHhhcc-ccc-h
Confidence 4677777777777 211 224445555555555665544 5556777777788889999997 764 5
Q ss_pred EeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 015354 139 VGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (408)
Q Consensus 139 ~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~ 215 (408)
|||=|.. +|.. | |-|++++.+|.+++.+-+. .-.+++++ .+|+++|+-+..+
T Consensus 252 ~tiLDd~-------~~~s-------y------~EsSaSa~faYallkgi~~-G~l~~~~~----~~~~kA~~aLl~~ 303 (357)
T COG4225 252 HTILDDG-------RPGS-------Y------LESSASAGFAYALLKGINL-GILDPEYA----PVAEKALDALLGH 303 (357)
T ss_pred hhhhccC-------CCCC-------c------hhhhHHHHHHHHHHHHHhc-CCCCchhh----HHHHHHHHHHHhh
Confidence 5554411 1111 1 2357778899888887654 11366776 7788888888776
No 34
>KOG4056 consensus Translocase of outer mitochondrial membrane complex, subunit TOM20 [Intracellular trafficking, secretion, and vesicular transport]
Probab=47.09 E-value=28 Score=30.63 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=31.7
Q ss_pred chHHHHHHHHHHHhcccccC----CCHHHHHHHHHHHHHHHH
Q 015354 173 SDVAGETAAALAAASLVFRK----GDPRYASLLLRTAKNVLQ 210 (408)
Q Consensus 173 s~~~~~~AAalA~as~vfk~----~D~~~A~~~l~~A~~~~~ 210 (408)
+-+++.+|+++++++-+|-+ .||.|++++.++.++-=.
T Consensus 11 ~vI~agiag~af~gYciYFd~KRrsdP~fk~~lr~rrk~q~~ 52 (143)
T KOG4056|consen 11 SVIAAGIAGLAFIGYCIYFDKKRRSDPDFKKKLRERRKKQAS 52 (143)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccChhHHHHHHHHHHHHhh
Confidence 46788889999999999865 499999999999987543
No 35
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein. This family contains the lanthionine synthetase C-like proteins 1 and 2 which are related to the bacterial lanthionine synthetase components C (LanC). LANCL1 and LANCL2 (testes-specific adriamycin sensitivity protein) are thought to be peptide-modifying enzyme components in eukaryotic cells. Both proteins are produced in large quantities in the brain and testes and may have role in the immune surveillance of these organs.
Probab=46.71 E-value=1.1e+02 Score=30.46 Aligned_cols=114 Identities=21% Similarity=0.269 Sum_probs=67.8
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccc
Q 015354 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (408)
Q Consensus 111 ~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vf 190 (408)
+-+.++++++=.++|+.+.+.+ .|.+....+ +.. ..+.+... + |+ ..++-++..++.++
T Consensus 182 ~~~~~~~~i~~~i~~~~~~~~~-~g~w~~~~~------------~~~-~~~~~~wC---h-G~---~Gi~~~l~~~~~~~ 240 (343)
T cd04794 182 LKPSLAPLIKRSLDYLLSLQFP-SGNFPSSLG------------NRK-RDRLVQWC---H-GA---PGIVYLLAKAYLVF 240 (343)
T ss_pred CCccHHHHHHHHHHHHHHhhcc-CCCCCCccC------------CCC-CCcccccc---C-CC---chHHHHHHHHHHHh
Confidence 3468888999999999988665 443211111 110 11211111 1 22 23466777888887
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHH--cCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 191 RKGDPRYASLLLRTAKNVLQFAMQ--YRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 191 k~~D~~~A~~~l~~A~~~~~~a~~--~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
+ |+.+-+.+.+.++..|+...- +|+. -.|. .+ ..++-..||+.|+++.|++.|..
T Consensus 241 ~--~~~~~~~~~~~~~~~~~~g~~~~~~~l--------CHG~----~G----~~~~lL~~~~~~~~~~~~~~a~~ 297 (343)
T cd04794 241 K--EEQYLEAAIKCGELIWKRGLLKKGPGL--------CHGI----AG----NAYAFLLLYRLTGDLKYLYRACK 297 (343)
T ss_pred C--CHHHHHHHHHHHHHHHHhCCccCCCcc--------ccCc----cc----hHHHHHHHHHHhCcHHHHHHHHH
Confidence 5 677777777777766643211 1121 1222 11 37788899999999999998876
No 36
>PF13249 Prenyltrans_2: Prenyltransferase-like; PDB: 1O6R_B 1O6Q_B 1H35_C 1H3A_C 1SQC_A 1UMP_A 1O6H_C 1O79_B 1GSZ_C 1H37_C ....
Probab=46.49 E-value=25 Score=28.44 Aligned_cols=22 Identities=23% Similarity=0.259 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhhccCCCCceEE
Q 015354 116 RAAIRWATDYLLKCATATPGKLYV 139 (408)
Q Consensus 116 Lde~kwg~d~llk~~~~~~g~~y~ 139 (408)
.++++ +++||+++|.+ +|.+..
T Consensus 42 ~~~~~-~~~~L~~~q~~-dGg~~~ 63 (113)
T PF13249_consen 42 RDRAA-AVEWLLSQQNP-DGGWGS 63 (113)
T ss_dssp HHHHH-HHHHHHHHB-T-TSGBBS
T ss_pred HHHHH-HHHHHHHhCCC-CCCccC
Confidence 55555 99999999998 887544
No 37
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=45.48 E-value=85 Score=31.80 Aligned_cols=126 Identities=20% Similarity=0.241 Sum_probs=65.4
Q ss_pred HHHHHHHHHHcCChhHHHHHHHc-----CCCCCCccccccchhHHHH-HHHhhhcccccchhhHHHHHHHHHHHHHhCCC
Q 015354 242 LWGAAWLFRATNDVTYYNFIKSV-----GDDGGTDVFSWDNKFAGAH-VLLARGALLNRDKNFEPYRQEAEDFICRILPN 315 (408)
Q Consensus 242 ~wAA~~Ly~aTgd~~Yl~~a~~~-----~~~~~~~~~~Wd~~~~~~~-~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~ 315 (408)
+.+-+.+|.||||++|++.++.. .... ....+=|...++-. +-|.+. ...+.|.+.+..+...++++
T Consensus 42 lyGv~~~~eAT~d~~yl~~l~~~~d~~i~~~g-~~~~~id~i~~g~~L~~L~e~------T~~~~Yl~~a~~~a~~l~~~ 114 (357)
T COG4225 42 LYGVARAYEATGDAEYLDYLKTWFDEQIDEGG-LPPRNIDHIAAGLTLLPLYEQ------TGDPRYLEAAIKLASWLVHE 114 (357)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHhhhccCC-CCccchhhhccCceeeehhhh------hCCHHHHHHHHHHHHHHhhC
Confidence 45788999999999999999983 1110 12222233222221 122221 12356666666655444332
Q ss_pred CCCCcccccCCCcee-----cCC-CCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhcc----cccc
Q 015354 316 SPFTTTQYTQGGLMY-----KMP-ESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTG----GLYI 385 (408)
Q Consensus 316 ~~~~~~~~tp~Gl~~-----~~~-WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qi----dYiL 385 (408)
++|..|-+| ..+ |----|. .-.|++. +.+. ++.++|.+-+..|- +|+
T Consensus 115 ------~Rt~eG~f~H~~~~p~Q~W~DtL~M-a~~F~ak-~g~~--------------~~~~e~~d~~~~QF~~~~~~l- 171 (357)
T COG4225 115 ------PRTKEGGFQHKVKYPHQMWLDTLYM-AGLFLAK-YGQV--------------TGRPEYFDEALYQFSLHEKYL- 171 (357)
T ss_pred ------cccCCCccccccCchhHhhhcchhh-hhHHHHH-HHHH--------------hCCHHHHHHHHHHHHHHHHHc-
Confidence 233333222 111 3222222 2234443 4444 47889999988874 343
Q ss_pred CCCCC-CCeeeeeC
Q 015354 386 RCEPN-KNVIHGWF 398 (408)
Q Consensus 386 G~NP~-~SfVtG~G 398 (408)
+.|- |=|.+|+-
T Consensus 172 -~Dp~TGL~YH~wd 184 (357)
T COG4225 172 -RDPETGLYYHGWD 184 (357)
T ss_pred -cCCCcCceEEeec
Confidence 4564 47888886
No 38
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=44.80 E-value=50 Score=32.88 Aligned_cols=82 Identities=22% Similarity=0.170 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcC-----CCCCCCCCCCcccccCCCCccchH-HHHHHH
Q 015354 173 SDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYR-----GAYSDSLGSAVCPFYCSYSGYKDE-LLWGAA 246 (408)
Q Consensus 173 s~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p-----~~~~~~~~~~~~~~Y~s~~~~~De-~~wAA~ 246 (408)
+-+.+...=++|.|++ +. +|+ +++.|++.++|..++= |.+.....+ ..+.=.....|.+- .+.|.+
T Consensus 20 ~~~q~R~~~~fa~a~~-~g--~~~----~l~~A~~~~~fl~~~~~D~~~Gg~~~~~~~-~~~~~~~~~~Y~~af~l~ala 91 (346)
T PF07221_consen 20 LWVQARQLYTFARAYR-LG--RPE----YLELAEHGFDFLRKHFRDPEYGGWYRSLDD-GGPLDPQKDLYDQAFALLALA 91 (346)
T ss_dssp HHHHHHHHHHHHHHHH-TT--SHH----HHHHHHHHHHHHHHTTBTTTTSSBSSEEET-TEEEE--EEHHHHHHHHHHHH
T ss_pred eeeeHHHHHHHHHHHh-cC--chh----HHHHHHHHHHHHHHhcccCCCCCEEEEeCC-CCCCccccchHHHHHHHHHHH
Confidence 4566888999999999 64 565 6777999999999861 222211110 00100010112222 356778
Q ss_pred HHHHHcCChhHHHHHHH
Q 015354 247 WLFRATNDVTYYNFIKS 263 (408)
Q Consensus 247 ~Ly~aTgd~~Yl~~a~~ 263 (408)
+ +++||++.|++.|++
T Consensus 92 ~-~~~tg~~~~~~~A~~ 107 (346)
T PF07221_consen 92 E-ARATGDPEALELAEQ 107 (346)
T ss_dssp H-HHCTT-TTHHHHHHH
T ss_pred H-HHHhCChhHHHHHHH
Confidence 8 999999999999876
No 39
>cd04792 LanM-like LanM-like proteins. LanM is a bifunctional enzyme, involved in the synthesis of class II lantibiotics. It is responsible for both the dehydration and the cyclization of the precursor-peptide during lantibiotic synthesis. The C-terminal domain shows similarity to LanC, the cyclase component of the lan operon, but the N terminus seems to be unrelated to the dehydratase, LanB.
Probab=44.62 E-value=5e+02 Score=29.19 Aligned_cols=122 Identities=13% Similarity=0.126 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCCh
Q 015354 176 AGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDV 255 (408)
Q Consensus 176 ~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~ 255 (408)
.+.++-.|+..+.+.. |+.|...+.+....+....+..+.. . . ..+.|...+ -.+++...|++.|+++
T Consensus 493 ~aGIal~l~~l~~~t~--~~~~~~~a~~~l~~l~~~~~~~~~~--~--~--~~gl~~G~a----Gi~~~L~~l~~~~~~~ 560 (825)
T cd04792 493 SAGIALFLAYLGQLTG--DERYTRLARKILDSLVKSLSELKTD--D--T--GIGAFSGLG----GILYALTHLGKLLKDD 560 (825)
T ss_pred hHHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHhccccc--c--c--CceeEechh----HHHHHHHHHHHHcCCH
Confidence 3455666666666654 5555544444444444444432111 0 0 123332213 3688999999999999
Q ss_pred hHHHHHHHc----C-CCCCCccccccchhHHHHHHHhhhcc-cccchhhHHHHHHHHHHH
Q 015354 256 TYYNFIKSV----G-DDGGTDVFSWDNKFAGAHVLLARGAL-LNRDKNFEPYRQEAEDFI 309 (408)
Q Consensus 256 ~Yl~~a~~~----~-~~~~~~~~~Wd~~~~~~~~lla~~~~-~~~~~~~~~~~~~ad~~~ 309 (408)
.|++.+.+. . .......+++-....|..+.|..+.. .+.+...+..+..++.++
T Consensus 561 ~~~~~a~~~~~~l~~~~~~~~~~D~~~G~aGii~~Ll~l~~~~~~~~~l~~a~~~~~~l~ 620 (825)
T cd04792 561 RLLNLAKEILDLIDELIEKDEKLDFISGAAGLILVLLSLYELFLSERFLDLALKCGDHLL 620 (825)
T ss_pred HHHHHHHHHHHHHHHhhccccCCCEeeecHHHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 999888762 1 11112334554545555544433321 122333334444444443
No 40
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.10 E-value=2.3e+02 Score=30.42 Aligned_cols=148 Identities=20% Similarity=0.180 Sum_probs=80.3
Q ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCC-----CCCCC-------cccccCCCCccchHHHHHHHHHHHH
Q 015354 184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSD-----SLGSA-------VCPFYCSYSGYKDELLWGAAWLFRA 251 (408)
Q Consensus 184 A~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~-----~~~~~-------~~~~Y~s~~~~~De~~wAA~~Ly~a 251 (408)
|+|..+...-||++-++ ++..++.++-++.--| |-+ ..|+. ..-.|+- --++=|++--|++
T Consensus 74 a~A~~l~~~~dp~Lekr-~D~vi~~~a~~QdedG-Yl~~~~q~~~pe~Rw~nlr~~HelY~a-----ghLieg~va~~qa 146 (589)
T COG3533 74 AAAYSLANKGDPELEKR-IDEVVEELARAQDEDG-YLGGWFQADFPEERWGNLRPNHELYCA-----GHLIEGGVAAHQA 146 (589)
T ss_pred HHHHHHhcCCCHHHHHH-HHHHHHHHHHhhccCC-cccceeeccCchhhhhccccchHHHHh-----HHHHhhhhHHHHh
Confidence 34555666779998665 5667777887774222 221 11110 0112221 2366788999999
Q ss_pred cCChhHHHHHHHc--------CC-CCCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCccc
Q 015354 252 TNDVTYYNFIKSV--------GD-DGGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQ 322 (408)
Q Consensus 252 Tgd~~Yl~~a~~~--------~~-~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~ 322 (408)
||+..-++.+.++ +. ..+...+....-.-.+.+-|+.. +++ .+|.+-+..|+.....+ |
T Consensus 147 TGkr~lldV~~rlADhi~tvfgp~~~q~~g~~gH~eielAl~~Ly~~--Tg~----~rYL~LA~~Fi~~rg~~------P 214 (589)
T COG3533 147 TGKRRLLDVVCRLADHIATVFGPEEDQVPGYCGHPEIELALAELYRL--TGD----QRYLDLARRFIHQRGVE------P 214 (589)
T ss_pred hCcchHHHHHHHHHHhhhhhcCccccccccccCCCchhHHHHHHHHH--hcC----hHHHHHHHHHHHHhccC------h
Confidence 9999999988874 21 11223333333333444444433 332 47888777776444221 2
Q ss_pred ccCCCceecCCCCchHHHHHHHHHHHHHHHHHH
Q 015354 323 YTQGGLMYKMPESNLQYVTSISFLLTTYAKYMR 355 (408)
Q Consensus 323 ~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~ 355 (408)
+-++|-- --..++..+..++.-.+++..
T Consensus 215 ~~~rg~e-----~~~gHAvr~iyl~~G~A~l~~ 242 (589)
T COG3533 215 LAQRGDE-----LEGGHAVRQIYLYIGAADLAE 242 (589)
T ss_pred hhcCchh-----hhhhhHHHHHHHhhhHHHHHH
Confidence 3333320 115667776777666677643
No 41
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. Bacterial SQCY catalyzes the convertion of squalene to hopene or diplopterol. Eukaryotic OSQCY transforms the 2,3-epoxide of squalene to compounds such as, lanosterol (a metabolic precursor of cholesterol and steroid hormones) in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain. This group also contains SQCY-like archael sequences and some bacterial SQCY's which lack this minor domain.
Probab=41.99 E-value=2e+02 Score=28.27 Aligned_cols=24 Identities=33% Similarity=0.477 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHhhccCCCCceE
Q 015354 114 NARAAIRWATDYLLKCATATPGKLY 138 (408)
Q Consensus 114 d~Lde~kwg~d~llk~~~~~~g~~y 138 (408)
.+.+.++=+++||+++|.+ +|.++
T Consensus 188 ~~~~~i~~a~~~L~~~q~~-dG~w~ 211 (348)
T cd02889 188 EIDPAIRRAVKYLEREQEP-DGSWY 211 (348)
T ss_pred HHHHHHHHHHHHHHHhCCC-CCCcc
Confidence 5667788899999999998 88754
No 42
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
Probab=41.87 E-value=3.6e+02 Score=26.74 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=50.7
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhc---
Q 015354 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAAS--- 187 (408)
Q Consensus 111 ~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as--- 187 (408)
+-+...+-+.=|+||||+||.+ +|+. -|+- |.... +.-.|+.+. ++...+.-.|...+
T Consensus 61 ~d~~y~~A~~rgld~LL~aQyp-nGGW-PQf~-----------p~~~~---Y~~~ITfND---~am~~vl~lL~~i~~~~ 121 (290)
T TIGR02474 61 KNAKYRDAARKGIEYLLKAQYP-NGGW-PQFY-----------PLKGG---YSDAITYND---NAMVNVLTLLDDIANGK 121 (290)
T ss_pred CchhHHHHHHHHHHHHHhhhCC-CCCc-Cccc-----------CCcCC---cccccccCc---HHHHHHHHHHHHHHhcc
Confidence 4477899999999999999999 7751 1111 11111 111122222 34444444553333
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHcC
Q 015354 188 LVFRKGDPRYASLLLRTAKNVLQFAMQYR 216 (408)
Q Consensus 188 ~vfk~~D~~~A~~~l~~A~~~~~~a~~~p 216 (408)
.-|...+.+..+++..+..++-+|..+.+
T Consensus 122 ~~~~~~~~~~~~r~~~Ai~Rgid~ILktQ 150 (290)
T TIGR02474 122 DPFDVFPDSTRTRAKTAVTKGIECILKTQ 150 (290)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHhh
Confidence 23334566677777788788888877653
No 43
>KOG1586 consensus Protein required for fusion of vesicles in vesicular transport, alpha-SNAP [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.60 E-value=33 Score=33.17 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=30.1
Q ss_pred HHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Q 015354 179 TAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAM 213 (408)
Q Consensus 179 ~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~ 213 (408)
+|-+.+-|+--||..||+-|..||++|+++|.---
T Consensus 73 aat~YveA~~cykk~~~~eAv~cL~~aieIyt~~G 107 (288)
T KOG1586|consen 73 AATTYVEAANCYKKVDPEEAVNCLEKAIEIYTDMG 107 (288)
T ss_pred HHHHHHHHHHHhhccChHHHHHHHHHHHHHHHhhh
Confidence 45667788899999999999999999999998543
No 44
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=39.30 E-value=24 Score=28.99 Aligned_cols=23 Identities=35% Similarity=0.228 Sum_probs=10.0
Q ss_pred CcccchhHHHHHHHHHHHH--HHhhcc
Q 015354 1 MAMRRGVSLRCCCLFLFLL--LIENAH 25 (408)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~--~~~~~~ 25 (408)
|+ +++.+|..| ++++|| +++|++
T Consensus 1 Ma-SK~~llL~l-~LA~lLlisSevaa 25 (95)
T PF07172_consen 1 MA-SKAFLLLGL-LLAALLLISSEVAA 25 (95)
T ss_pred Cc-hhHHHHHHH-HHHHHHHHHhhhhh
Confidence 55 444444444 444433 334444
No 45
>PF09492 Pec_lyase: Pectic acid lyase; InterPro: IPR012669 Members of this family are isozymes of pectate lyase (4.2.2.2 from EC), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.; PDB: 1R76_A 1GXM_B 1GXN_A 1GXO_A.
Probab=39.18 E-value=1.2e+02 Score=30.17 Aligned_cols=161 Identities=22% Similarity=0.317 Sum_probs=77.0
Q ss_pred HHHHhhccCchhHHHHHHHHHhhh-HHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHH
Q 015354 18 LLLIENAHGNPNYREALAKSLLFF-QGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTM 96 (408)
Q Consensus 18 ~~~~~~~~~~~~Y~~~l~~sl~fy-~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~ 96 (408)
|+-+-.+.++..|.+++.+.+.|. .+|-. . +.|-. ..-+.||||| |+=|.=....-+..
T Consensus 48 La~~y~~t~d~~y~~A~~kgl~ylL~aQyp----n---GGWPQ----------~yP~~~~Y~~---~ITfNDdam~~vl~ 107 (289)
T PF09492_consen 48 LARVYQATKDPRYREAFLKGLDYLLKAQYP----N---GGWPQ----------FYPLRGGYHD---HITFNDDAMVNVLE 107 (289)
T ss_dssp HHHHHHHCG-HHHHHHHHHHHHHHHHHS-T----T---S--BS----------ECS--SGGGG---SEE-GGGHHHHHHH
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHhhCC----C---CCCCc----------cCCCCCCCCC---ceEEccHHHHHHHH
Confidence 333444558889999999999765 44432 1 12321 2234666664 33333333333333
Q ss_pred HHHHHHHccccc----CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCcc
Q 015354 97 LSWSTLEYGKKM----GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPG 172 (408)
Q Consensus 97 L~~~~~ef~~~~----~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pg 172 (408)
|+.-..+-...| ......+.+-+.=|+|+|||+|...+|. . ..|+-=.+...-.|+..-+.+.|+
T Consensus 108 lL~~v~~~~~~~~~v~~~~~~r~~~A~~kgi~ciL~tQi~~~g~----~-------t~W~qQhD~~Tl~Pa~AR~yE~pS 176 (289)
T PF09492_consen 108 LLRDVAEGKGDFAFVDESLRARARAAVDKGIDCILKTQIRQNGK----L-------TAWCQQHDEVTLQPAWARAYEPPS 176 (289)
T ss_dssp HHHHHHCT-TTSTTS-HHHHHHHHHHHHHHHHHHHHHS-EETTE----E-----------SEE-TTT-SB---STT--SS
T ss_pred HHHHHHhhcCCccccCHHHHHHHHHHHHHHHHHHHHHHcccCCC----C-------CchhhccCcccccccccccCCCcc
Confidence 333333333333 4456679999999999999999853442 1 123321111111222222222222
Q ss_pred chHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 015354 173 SDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (408)
Q Consensus 173 s~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~ 215 (408)
-.+.|.+..+-.-=.+ .+|+ .+.+++-+.+-+|.+++
T Consensus 177 -ls~~ES~~iv~~LM~~---~~ps--~~v~~aI~~AvaWl~~~ 213 (289)
T PF09492_consen 177 -LSGSESVGIVRFLMSL---PNPS--PEVLAAIEAAVAWLESV 213 (289)
T ss_dssp -EECCCHHHHHHHHCTS---SS----HHHHHHHHHHHHHHCCT
T ss_pred -cccccHHHHHHHHhcC---CCCC--HHHHHHHHHHHHHHHhC
Confidence 1223444444433333 2444 88888999999999876
No 46
>cd02889 SQCY Squalene cyclase (SQCY) domain; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. Bacterial SQCY catalyzes the convertion of squalene to hopene or diplopterol. Eukaryotic OSQCY transforms the 2,3-epoxide of squalene to compounds such as, lanosterol (a metabolic precursor of cholesterol and steroid hormones) in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain. This group also contains SQCY-like archael sequences and some bacterial SQCY's which lack this minor domain.
Probab=38.73 E-value=3.9e+02 Score=26.20 Aligned_cols=157 Identities=16% Similarity=0.165 Sum_probs=79.4
Q ss_pred hhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCC-CCCCCCCCccccccccee--ccCCCcccccchhHHHHHHHHHHHHc
Q 015354 28 PNYREALAKSLLFFQGQRSGRLPKDQQITWRSN-SGLSDGLFAHVDLTGGYY--DAGDNVKFNFPMAFTTTMLSWSTLEY 104 (408)
Q Consensus 28 ~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~-s~l~Dg~~~~~dl~GGW~--DAGD~~Ky~~~~a~s~~~L~~~~~ef 104 (408)
..|.+.+.+++.|...++--..+.+ |... .+ .-.|||= +.+..-..+..+++++..|+- +.++
T Consensus 42 ~~~~~~~~ka~~~l~~~q~~~~~~~----~~~~~~~---------~~~Ggw~y~~~~~~~~~~~~Ta~~l~al~~-~~~~ 107 (348)
T cd02889 42 PEFDPALKKALEWLLKSQIRDNPDD----WKVKYRH---------LRKGGWAFSTANQGYPDSDDTAEALKALLR-LQKK 107 (348)
T ss_pred CccCHHHHHHHHHHHhcCCCCCCCc----hhhcCCC---------CCCCcCcccCcCCCCCCCCChHHHHHHHHH-hhcc
Confidence 5789999999998876542112221 1100 11 1234432 111100112355666655532 2222
Q ss_pred ccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCC--CCCCCCCCccceEEcCCCCccchHHHHHHHH
Q 015354 105 GKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCW--ERPEDMDTVRSVYSVSASNPGSDVAGETAAA 182 (408)
Q Consensus 105 ~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w--~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAa 182 (408)
. ..+.+...+.++=+++||+++|.+ +|.+..- .. .. +..| ..|+... .. . . +.|..+.|+.+..+
T Consensus 108 ~---~~~~~~~~~~i~~a~~~L~~~Q~~-dG~f~~~-~~-~~-~~~~~~~~~~~~~-~~-~--~--~~~~~~~Ta~~l~a 174 (348)
T cd02889 108 P---PDGKKVSRERLYDAVDWLLSMQNS-NGGFAAF-EP-DN-TYKYLELIPEVDG-DI-M--I--DPPYVECTGSVLEA 174 (348)
T ss_pred C---cccchhhHHHHHHHHHHHHHhccC-CCCEeee-cC-Cc-cHHHHhcCchhhc-CC-c--c--CCCCcchHHHHHHH
Confidence 2 224455678899999999999998 9986421 11 00 0011 0111111 00 0 1 12334667777777
Q ss_pred HHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 015354 183 LAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (408)
Q Consensus 183 lA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~ 215 (408)
|+.+.+.... ..+++.+..+++.+|..+.
T Consensus 175 L~~~~~~~~~----~~~~~~~~i~~a~~~L~~~ 203 (348)
T cd02889 175 LGLFGKLYPE----HRREIDPAIRRAVKYLERE 203 (348)
T ss_pred HHHhhhcCCc----hHHHHHHHHHHHHHHHHHh
Confidence 7776655432 2335666777788888764
No 47
>TIGR01787 squalene_cyclas squalene/oxidosqualene cyclases. This family of enzymes catalyzes the cyclization of the triterpenes squalene or 2-3-oxidosqualene to a variety of products including hopene, lanosterol, cycloartenol, amyrin, lupeol and isomultiflorenol.
Probab=38.57 E-value=5.2e+02 Score=28.40 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCceEE
Q 015354 113 QNARAAIRWATDYLLKCATATPGKLYV 139 (408)
Q Consensus 113 ~d~Lde~kwg~d~llk~~~~~~g~~y~ 139 (408)
+.+.+.|+=+++||+++|.+ ||.++.
T Consensus 456 ~~~~~~i~rAl~~L~~~Q~~-DGsw~g 481 (621)
T TIGR01787 456 DEIRNVLERALEYLRREQRA-DGSWFG 481 (621)
T ss_pred HhHHHHHHHHHHHHHHhcCC-CCCCcc
Confidence 34567899999999999999 998753
No 48
>PLN02993 lupeol synthase
Probab=37.39 E-value=6.6e+02 Score=28.47 Aligned_cols=163 Identities=12% Similarity=0.129 Sum_probs=78.1
Q ss_pred hHHHHHHHHHhhhHHhcCCC-CCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHH-HHHHHHHHccc
Q 015354 29 NYREALAKSLLFFQGQRSGR-LPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTT-MLSWSTLEYGK 106 (408)
Q Consensus 29 ~Y~~~l~~sl~fy~~QR~G~-l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~-~L~~~~~ef~~ 106 (408)
.+...|+++..|...+..-. .|.+..+..|+ ..-|.=.--+...||=|.=| +|.++- .|+. ...+.
T Consensus 436 ~~~~~l~kA~~~L~~~Qv~~~~~gdw~~~~r~---~~~GgW~Fs~~~~gyp~sDd-------TAe~lka~l~l--~~~~~ 503 (763)
T PLN02993 436 ETDDVLRRGHNYIKKSQVRENPSGDFKSMYRH---ISKGAWTLSDRDHGWQVSDC-------TAEALKCCMLL--SMMPA 503 (763)
T ss_pred ccCHHHHHHHHHHHHHhccCCCCCchHhhCCC---CCCCcCcCccCCCCCCcCCc-------hHHHHHHHHHH--hhCcc
Confidence 68899999999998777653 33332322221 11121111122344444444 222221 1111 22221
Q ss_pred cc-CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHH
Q 015354 107 KM-GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAA 185 (408)
Q Consensus 107 ~~-~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~ 185 (408)
.. +..++ -+-++=++||||.||.. +|++=.=--+.+..-..+.+|.+.-.. + -| +.|..+.|+.+.-+|+.
T Consensus 504 ~~~~~~~~--~~~l~~av~wlL~mQn~-dGG~aafe~~~~~~~le~ln~ae~f~~--~-mi--D~~~~dcT~~vl~aL~~ 575 (763)
T PLN02993 504 DVVGQKID--PEQLYDSVNLLLSLQSE-NGGVTAWEPVRAYKWLELLNPTDFFAN--T-MV--EREYVECTSAVIQALVL 575 (763)
T ss_pred ccccccch--HHHHHHHHHHHHhhccC-CCCEEeeeCCCchhHHHcCCHHHhhcC--c-cc--CCCCcCHHHHHHHHHHH
Confidence 12 22222 36788899999999999 887533222211111123345442100 1 12 23556888877777776
Q ss_pred hcccccCCCHHH-HHHHHHHHHHHHHHHHHc
Q 015354 186 ASLVFRKGDPRY-ASLLLRTAKNVLQFAMQY 215 (408)
Q Consensus 186 as~vfk~~D~~~-A~~~l~~A~~~~~~a~~~ 215 (408)
-...+ |.+ .++.-+.-+++-+|+.+.
T Consensus 576 ~~~~~----p~~r~~ei~~~i~rAv~yL~~~ 602 (763)
T PLN02993 576 FKQLY----PDHRTKEIIKSIEKAVQFIESK 602 (763)
T ss_pred hcccC----cchhhhhHHHHHHHHHHHHHHh
Confidence 54333 332 222233344555666654
No 49
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only]
Probab=32.85 E-value=1e+02 Score=33.27 Aligned_cols=86 Identities=19% Similarity=0.261 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc----------C-CCCCCCCCCCcccccCCC-CccchHH
Q 015354 174 DVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY----------R-GAYSDSLGSAVCPFYCSY-SGYKDEL 241 (408)
Q Consensus 174 ~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~----------p-~~~~~~~~~~~~~~Y~s~-~~~~De~ 241 (408)
..-|.+...||.++.+++. +| ++++.|+..-+|..++ + ..|...........-+++ ..+.||.
T Consensus 505 sWnGLviSgl~kag~~~~a-~~----~y~~~a~~~a~fl~k~m~d~~eklliR~scY~ga~g~ve~~n~~~~~~~FldDY 579 (786)
T KOG2244|consen 505 SWNGLVISGLAKAGKILKA-EP----EYTKYAFPVANFLPKDMIDVAEKLLIRGSCYDGASGRVEHSNRPSKAPAFLDDY 579 (786)
T ss_pred eccchhhHHHHHHHHHhhc-CH----HHHHHHHHHHhhhhhhhhchhhhheeecccccCCCcceeccCCccccchhhhhH
Confidence 4457788889999999974 55 4444454444444432 3 234432222111111221 2366764
Q ss_pred ---HHHHHHHHHHcCChhHHHHHHHc
Q 015354 242 ---LWGAAWLFRATNDVTYYNFIKSV 264 (408)
Q Consensus 242 ---~wAA~~Ly~aTgd~~Yl~~a~~~ 264 (408)
+=+-+.||.++|+..||..|.++
T Consensus 580 AFlI~gLLDlYea~~~~e~LkwA~~L 605 (786)
T KOG2244|consen 580 AFLISGLLDLYEAGGGIEWLKWAIKL 605 (786)
T ss_pred HHHHHHHHHHHHccCchHHHHHHHHH
Confidence 44889999999999999999875
No 50
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=29.95 E-value=3.4e+02 Score=29.79 Aligned_cols=24 Identities=38% Similarity=0.572 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHhhccCCCCceE
Q 015354 114 NARAAIRWATDYLLKCATATPGKLY 138 (408)
Q Consensus 114 d~Lde~kwg~d~llk~~~~~~g~~y 138 (408)
+|.+.++=+++||++.|.+ +|..|
T Consensus 473 ~i~~~i~rAv~~L~~~Q~~-DGsW~ 496 (634)
T cd02892 473 EIDPAIRRAVKYLLREQEP-DGSWY 496 (634)
T ss_pred HHHHHHHHHHHHHHHccCC-CCCcc
Confidence 5777888899999999998 88765
No 51
>PLN03012 Camelliol C synthase
Probab=28.88 E-value=95 Score=34.92 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCceEEeeCC
Q 015354 113 QNARAAIRWATDYLLKCATATPGKLYVGVGD 143 (408)
Q Consensus 113 ~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~ 143 (408)
++|-.-|+=+++||++.|.+ ||+.|.+.|.
T Consensus 586 ~~i~~~i~rAv~~L~~~Q~~-DGsW~G~Wgv 615 (759)
T PLN03012 586 EEINAFIKKAAEYIENIQML-DGSWYGNWGI 615 (759)
T ss_pred hhhHHHHHHHHHHHHHhcCC-CCCCcccccc
Confidence 44556788899999999999 9998866653
No 52
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=28.00 E-value=6.5e+02 Score=25.51 Aligned_cols=41 Identities=15% Similarity=-0.039 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHH
Q 015354 174 DVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQ 214 (408)
Q Consensus 174 ~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~ 214 (408)
++-|-.-.||-.++.+.+....+.+.++.+.|+++=+--++
T Consensus 167 EIqal~y~AL~~~~~la~~~~~~~a~~~~~~A~~lk~~F~~ 207 (370)
T PF06202_consen 167 EIQALWYNALRFAAELAEKFGDELAARYREWAERLKESFEK 207 (370)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Confidence 45555566676666666633333777777777776554433
No 53
>PRK15396 murein lipoprotein; Provisional
Probab=27.87 E-value=53 Score=26.04 Aligned_cols=23 Identities=26% Similarity=0.124 Sum_probs=14.4
Q ss_pred ccc-hhHHHHHHHHHHHHHHhhcc
Q 015354 3 MRR-GVSLRCCCLFLFLLLIENAH 25 (408)
Q Consensus 3 ~~~-~~~~~~~~~~~~~~~~~~~~ 25 (408)
|.| |+++...++.+++|.+|+..
T Consensus 1 m~~~kl~l~av~ls~~LLaGCAs~ 24 (78)
T PRK15396 1 MNRTKLVLGAVILGSTLLAGCSSN 24 (78)
T ss_pred CchhHHHHHHHHHHHHHHHHcCCc
Confidence 445 45555555556678888854
No 54
>TIGR01787 squalene_cyclas squalene/oxidosqualene cyclases. This family of enzymes catalyzes the cyclization of the triterpenes squalene or 2-3-oxidosqualene to a variety of products including hopene, lanosterol, cycloartenol, amyrin, lupeol and isomultiflorenol.
Probab=26.43 E-value=3.3e+02 Score=29.95 Aligned_cols=19 Identities=26% Similarity=0.393 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhhccCCCCc
Q 015354 117 AAIRWATDYLLKCATATPGK 136 (408)
Q Consensus 117 de~kwg~d~llk~~~~~~g~ 136 (408)
++++=+++||+++|.+ ||+
T Consensus 509 ~~i~rA~~~L~~~Q~~-DGG 527 (621)
T TIGR01787 509 PEVQKACDWLLSRQMP-DGG 527 (621)
T ss_pred HHHHHHHHHHHhhcCC-CCC
Confidence 6777799999999998 775
No 55
>TIGR00985 3a0801s04tom mitochondrial import receptor subunit translocase of outer membrane 20 kDa subunit.
Probab=25.39 E-value=92 Score=27.75 Aligned_cols=33 Identities=27% Similarity=0.314 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHhcccccC----CCHHHHHHHHHHHH
Q 015354 174 DVAGETAAALAAASLVFRK----GDPRYASLLLRTAK 206 (408)
Q Consensus 174 ~~~~~~AAalA~as~vfk~----~D~~~A~~~l~~A~ 206 (408)
.+++.+++++.+++-||=| .||+|.+++.+.-+
T Consensus 10 ~~~ag~a~~~flgYciYFD~KRR~dPdFRkkLr~rr~ 46 (148)
T TIGR00985 10 VIAAGIAAAAFLGYAIYFDYKRRNDPDFRKKLRRRRK 46 (148)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHH
Confidence 4556677888888999865 49999999987665
No 56
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=25.28 E-value=2.5e+02 Score=30.94 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhhccCCCCceEE
Q 015354 116 RAAIRWATDYLLKCATATPGKLYV 139 (408)
Q Consensus 116 Lde~kwg~d~llk~~~~~~g~~y~ 139 (408)
-..|+=+++||+++|.+ +|+.|.
T Consensus 470 ~~~i~rav~~L~~~Q~~-dG~W~g 492 (635)
T TIGR01507 470 WPVIERAVEYLKREQEP-DGSWFG 492 (635)
T ss_pred hHHHHHHHHHHHHccCC-CCCCcc
Confidence 45677799999999999 997653
No 57
>PF13243 Prenyltrans_1: Prenyltransferase-like; PDB: 3SDR_A 3SAE_A 3SDV_A 3SDT_A 3SDQ_A 3SDU_A.
Probab=25.20 E-value=13 Score=30.21 Aligned_cols=22 Identities=32% Similarity=0.424 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHhhccCCCCc
Q 015354 114 NARAAIRWATDYLLKCATATPGK 136 (408)
Q Consensus 114 d~Lde~kwg~d~llk~~~~~~g~ 136 (408)
...+-|+=+++||+++|.+ ||+
T Consensus 43 ~~~~ai~ka~~~l~~~Q~~-dG~ 64 (109)
T PF13243_consen 43 AVDEAIKKAIDWLLSHQNP-DGG 64 (109)
T ss_dssp -SSBSSHHHHHHHHH---T-TS-
T ss_pred CcHHHHHHHHHHHHHhcCC-CCC
Confidence 5666678899999999988 775
No 58
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=20.64 E-value=7.6e+02 Score=23.71 Aligned_cols=122 Identities=16% Similarity=0.012 Sum_probs=61.9
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccc
Q 015354 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (408)
Q Consensus 111 ~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vf 190 (408)
+-+++++.++=-.|+|++.... +. +...|. +.+. ...-+ ..-.+.++-+|...+.+.
T Consensus 99 ~~~~~l~~a~~~~~~l~~~~~~--~~----------~~~~~~-~~~~--~~~G~--------~hG~aGi~~~L~~l~~~t 155 (321)
T cd04791 99 GDPALLEAAAKIAELLAEALER--GD----------PALLWP-DFDR--VDHGL--------LHGWAGIALFLLRLYKAT 155 (321)
T ss_pred CChHHHHHHHHHHHHHHHHhhc--cc----------cccccc-cCCC--CCCcc--------ccCcHHHHHHHHHHHHHH
Confidence 4578888999889998875432 11 011231 1110 11111 111245666777777775
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHc----CCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 191 RKGDPRYASLLLRTAKNVLQFAMQY----RGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 191 k~~D~~~A~~~l~~A~~~~~~a~~~----p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
+ |+.| ++.|+++.++..++ ++.+..... .......|..=.-=++++-..|++.|+|++|++.+++
T Consensus 156 ~--d~~~----l~~A~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~wchG~aGi~~~l~~l~~~~~d~~~~~~a~~ 224 (321)
T cd04791 156 G--DSRY----LELAEEALDKELARAVVDDGGLLQVDE--GARLLPYLCSGSAGLGLLMLRLEAITGDKRWRDEADG 224 (321)
T ss_pred C--CHHH----HHHHHHHHHHHHHhhccCCCCceEcCC--CCccCcccCCCcHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4 4554 44444444444332 221110000 0000001111122467888999999999999998887
Done!