Query 015354
Match_columns 408
No_of_seqs 138 out of 1001
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 11:09:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015354.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015354hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xfg_A Endoglucanase 1; hydrol 100.0 1.7E-98 6E-103 774.9 30.6 367 21-407 17-399 (466)
2 1ia6_A Cellulase CEL9M; cellul 100.0 7.5E-98 3E-102 766.7 30.4 349 26-407 2-366 (441)
3 1tf4_A T. fusca endo/EXO-cellu 100.0 2E-97 7E-102 788.9 28.6 363 26-407 2-379 (605)
4 1ks8_A Endo-B-1,4-glucanase; c 100.0 1.5E-97 5E-102 763.3 26.5 353 27-407 2-362 (433)
5 2yik_A Endoglucanase; hydrolas 100.0 2.9E-98 1E-102 796.2 21.9 370 23-407 33-454 (611)
6 1g87_A Endocellulase 9G; endog 100.0 1.5E-95 5E-100 775.1 29.1 361 26-407 2-376 (614)
7 1clc_A Endoglucanase CELD; EC: 100.0 5.8E-87 2E-91 713.1 25.4 353 25-407 124-509 (639)
8 3gzk_A Cellulase; fold from GH 100.0 4.2E-86 1.4E-90 694.0 22.0 356 25-407 83-464 (537)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 1.9E-83 6.3E-88 683.6 28.1 355 26-407 97-533 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 1.3E-65 4.6E-70 538.4 18.3 339 26-408 92-505 (586)
11 2gz6_A N-acetyl-D-glucosamine 97.2 0.032 1.1E-06 54.9 20.2 110 125-263 24-142 (388)
12 3gt5_A N-acetylglucosamine 2-e 97.0 0.046 1.6E-06 54.6 19.2 144 83-263 47-200 (402)
13 3k7x_A LIN0763 protein; Q92DQ0 96.7 0.11 3.7E-06 51.1 19.1 178 16-263 53-240 (349)
14 2gz6_A N-acetyl-D-glucosamine 96.5 0.071 2.4E-06 52.4 16.1 146 84-263 49-199 (388)
15 3k7x_A LIN0763 protein; Q92DQ0 94.7 0.51 1.8E-05 46.3 14.4 69 176-263 48-119 (349)
16 3gt5_A N-acetylglucosamine 2-e 94.4 0.58 2E-05 46.5 14.2 234 7-263 51-337 (402)
17 1fp3_A N-acyl-D-glucosamine 2- 92.9 0.88 3E-05 44.8 12.4 119 115-263 15-149 (402)
18 2zzr_A Unsaturated glucuronyl 92.4 0.49 1.7E-05 47.4 9.6 130 111-263 131-273 (397)
19 1nc5_A Hypothetical protein YT 92.0 2.3 8E-05 41.7 13.9 56 200-263 107-170 (373)
20 2ahf_A Unsaturated glucuronyl 91.5 0.62 2.1E-05 46.3 9.2 129 112-263 106-248 (377)
21 3k11_A Putative glycosyl hydro 91.5 3.6 0.00012 41.6 14.9 259 80-398 74-381 (445)
22 3pmm_A Putative cytoplasmic pr 91.4 3.2 0.00011 41.0 14.2 176 193-398 22-219 (382)
23 3k11_A Putative glycosyl hydro 90.6 3.3 0.00011 41.9 13.6 135 89-254 267-416 (445)
24 1nc5_A Hypothetical protein YT 89.6 3.4 0.00012 40.5 12.6 69 177-263 44-114 (373)
25 1fp3_A N-acyl-D-glucosamine 2- 87.7 1.1 3.8E-05 44.1 7.5 86 170-263 245-341 (402)
26 2zbl_A Putative isomerase; N-a 86.6 1.3 4.5E-05 44.2 7.4 145 84-263 47-199 (421)
27 2ahf_A Unsaturated glucuronyl 80.8 10 0.00035 37.4 11.0 154 85-263 145-312 (377)
28 1w6k_A Lanosterol synthase; cy 77.5 80 0.0027 33.8 18.5 164 28-216 405-571 (732)
29 3pmm_A Putative cytoplasmic pr 77.2 10 0.00035 37.3 9.7 112 74-215 211-332 (382)
30 1gxm_A Pectate lyase; mechanis 73.4 20 0.00069 34.7 10.3 85 112-216 92-182 (332)
31 3e6u_A LANC-like protein 1; al 71.8 14 0.00049 36.5 9.3 115 111-263 248-362 (411)
32 2zbl_A Putative isomerase; N-a 69.4 9.3 0.00032 37.9 7.3 87 170-263 245-343 (421)
33 1r76_A Pectate lyase; A-helica 59.9 72 0.0025 31.7 11.4 86 112-216 170-258 (408)
34 2zzr_A Unsaturated glucuronyl 57.2 45 0.0015 33.0 9.6 152 88-263 173-337 (397)
35 2p0v_A Hypothetical protein BT 53.5 94 0.0032 31.6 11.3 122 85-215 176-319 (489)
36 2v8i_A Pectate lyase; periplas 43.4 28 0.00097 35.3 5.4 46 241-286 431-490 (543)
37 2kmg_A KLCA; ARDB, spectroscop 41.6 17 0.00059 30.8 3.1 88 124-217 40-133 (142)
38 2g0d_A Nisin biosynthesis prot 32.2 1.4E+02 0.0046 28.9 8.5 71 177-263 282-352 (409)
39 2wj9_A ARDB, intergenic-region 29.3 78 0.0027 27.9 5.4 87 123-217 78-172 (181)
40 3tgv_A Heme-binding protein HU 28.2 13 0.00045 31.2 0.2 20 386-406 126-146 (148)
No 1
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=1.7e-98 Score=774.88 Aligned_cols=367 Identities=35% Similarity=0.574 Sum_probs=326.6
Q ss_pred HhhccCchhHHHHHHHHHhhhHHhcCCCC-CCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHH
Q 015354 21 IENAHGNPNYREALAKSLLFFQGQRSGRL-PKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSW 99 (408)
Q Consensus 21 ~~~~~~~~~Y~~~l~~sl~fy~~QR~G~l-~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~ 99 (408)
...++++++|.++|++||+||++||||.+ |+.+|++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|
T Consensus 17 ~~~~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w 96 (466)
T 2xfg_A 17 QPPATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGW 96 (466)
T ss_dssp ----CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHH
Confidence 33477789999999999999999999997 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHccccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHH
Q 015354 100 STLEYGKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAG 177 (408)
Q Consensus 100 ~~~ef~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~ 177 (408)
+++||++.| +|++||||||||||+|||||||++ +|.||+|||++..||.+|++||+++.+|++|.|+.++|||++++
T Consensus 97 ~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~-~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~ 175 (466)
T 2xfg_A 97 AVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPE-KDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVA 175 (466)
T ss_dssp HHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSB-TTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHH
T ss_pred HHHHhHHHHhcCCCchHHHHHHHHHHHHHHHhccC-CCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHH
Confidence 999999999 899999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhH
Q 015354 178 ETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTY 257 (408)
Q Consensus 178 ~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Y 257 (408)
++|||||+||||||++||+||++||++||++|+||+++|+.|.. + ..+++|+|++++.||++|||+|||+||||++|
T Consensus 176 e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~-~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Y 252 (466)
T 2xfg_A 176 ETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGY--T-AANGFYNSWSGFYDELSWAAVWLYLATNDSSY 252 (466)
T ss_dssp HHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--C-TTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCC--C-ccccccCCCCCCchHHHHHHHHHHHHhCCHHH
Confidence 99999999999999999999999999999999999999998843 3 36789999899999999999999999999999
Q ss_pred HHHHHHcCCC----------CCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCC
Q 015354 258 YNFIKSVGDD----------GGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGG 327 (408)
Q Consensus 258 l~~a~~~~~~----------~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~G 327 (408)
+++++++... ...+.|+||+|..+++++|+++. +.+ ..|++.++.+++.++.+.+++++++||+|
T Consensus 253 l~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~tp~G 327 (466)
T 2xfg_A 253 LDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIK--NDN---GKYKEAIERHLDWWTTGYNGERITYTPKG 327 (466)
T ss_dssp HHHHHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CSS---CHHHHHHHHHHHHHTTCBTTBCCCBCTTS
T ss_pred HHHHHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhc--CCc---HHHHHHHHHHHHHHHhccCCCccccCCcc
Confidence 9999984211 12457999999999999998752 322 13444444445455444456789999999
Q ss_pred ceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCC
Q 015354 328 LMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPE 404 (408)
Q Consensus 328 l~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Ph 404 (408)
|+|...||||||++|++||+++|++++ .|+ ..++++|+++|++|||||||+| + ||||||| +|+|||
T Consensus 328 l~~~~~Wgs~~~~~n~afl~~~y~~~~-------~~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pH 396 (466)
T 2xfg_A 328 LAWLDQWGSLRYATTTAFLACVYSDWE-------NGD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPH 396 (466)
T ss_dssp CBCCCSSSHHHHHHHHHHHHHHHHTCT-------TSC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCS
T ss_pred ccccCCCCchHHHHHHHHHHHHHHHhc-------CCC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCc
Confidence 999999999999999999999999974 242 2347899999999999999999 6 9999999 689999
Q ss_pred CCC
Q 015354 405 EDS 407 (408)
Q Consensus 405 h~~ 407 (408)
||.
T Consensus 397 HR~ 399 (466)
T 2xfg_A 397 HRT 399 (466)
T ss_dssp CHH
T ss_pred Cch
Confidence 995
No 2
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=7.5e-98 Score=766.69 Aligned_cols=349 Identities=30% Similarity=0.507 Sum_probs=321.0
Q ss_pred CchhHHHHHHHHHhhhHHhcCCCCCC-CCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHHHHHHc
Q 015354 26 GNPNYREALAKSLLFFQGQRSGRLPK-DQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEY 104 (408)
Q Consensus 26 ~~~~Y~~~l~~sl~fy~~QR~G~l~~-~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef 104 (408)
+.++|+++|++||+||++||||++|+ +++++||++||+.||.+.++||+|||||||||+||++|+++|+++|+|+++||
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~ 81 (441)
T 1ia6_A 2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGLPQGYSAAILGWSLYEF 81 (441)
T ss_dssp CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCcccCCCCeeeCCCCCeeccchHHHHHHHHHHHHHh
Confidence 56899999999999999999999887 89999999999999999999999999999999999999999999999999999
Q ss_pred cccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccce-EEcCCCCccchHHHHHHH
Q 015354 105 GKKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSV-YSVSASNPGSDVAGETAA 181 (408)
Q Consensus 105 ~~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~-~~~~~~~pgs~~~~~~AA 181 (408)
++.| .+++||||||||||+|||||||++ +|.||+|||++..||.+|++||+++.+|++ |.|+.++|||++++++||
T Consensus 82 ~~~~~~~g~~~d~ldeikwg~D~llk~~~~-~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AA 160 (441)
T 1ia6_A 82 KESFDATGNTTKMLQQLKYFTDYFLKSHPN-STTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSA 160 (441)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTCCS-TTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHH
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHhccC-CCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHH
Confidence 9999 889999999999999999999998 999999999999999999999999999999 999999999999999999
Q ss_pred HHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHH
Q 015354 182 ALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFI 261 (408)
Q Consensus 182 alA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a 261 (408)
|||+||||||++||+||++||++||++|+||+++|+.+. .+++|+| +++.||++|||+|||+||||++|++++
T Consensus 161 alAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~------~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~a 233 (441)
T 1ia6_A 161 ALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN------GQSFYQA-TSFGDDLAWAATWLYTATNDSTYITDA 233 (441)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC------CTTTSCC-CCSHHHHHHHHHHHHHHHCCTHHHHHH
T ss_pred HHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC------CCCCCCC-CCchhHHHHHHHHHHHHhCCHHHHHHH
Confidence 999999999999999999999999999999999998643 5789999 999999999999999999999999999
Q ss_pred HHcC-CC--------CCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecC
Q 015354 262 KSVG-DD--------GGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKM 332 (408)
Q Consensus 262 ~~~~-~~--------~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~ 332 (408)
+++. .. ...+.|+||++..+++++|+++. +. ..|++.++.+++.++ .++++||+|+.|..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~----~~~~~~~~~~~~~~~-----~~~~~tp~Gl~~~~ 302 (441)
T 1ia6_A 234 EQFITLGNTMNENKMQDKWTMCWDDMYVPAALRLAQIT--GK----QIYKDAIEFNFNYWK-----TQVTTTPGGLKWLS 302 (441)
T ss_dssp HHHTTC------CGGGCSSCSSSSCCHHHHHHHHHHHH--CC----HHHHHHHHHHHHHHH-----HTSCBCTTSCBCCC
T ss_pred HHHHhhhhhcccccccCCCcCCccchHHHHHHHHHhcc--Cc----HHHHHHHHHHHHHHH-----hhcccCCCCceecC
Confidence 9841 11 13467999999999999988752 22 356777777665554 25789999999989
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCC
Q 015354 333 PESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDS 407 (408)
Q Consensus 333 ~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~ 407 (408)
.||||++++|++||+++|+++ .++++|+++|++|||||||+||++ |||||+| +|+|||||.
T Consensus 303 ~WGs~~~~~~~a~l~~~~~~~--------------~~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~ 366 (441)
T 1ia6_A 303 NWGVLRYAAAESMVMLVYCKQ--------------NPDQSLLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRA 366 (441)
T ss_dssp STTHHHHHHHHHHHHHHHHHH--------------SCCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCBCHH
T ss_pred CcchHHHHHHHHHHHHHHHhh--------------cCHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCCCcChh
Confidence 999999999999999999997 357799999999999999999999 9999999 689999995
No 3
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=2e-97 Score=788.95 Aligned_cols=363 Identities=38% Similarity=0.660 Sum_probs=335.1
Q ss_pred CchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHHHHHHcc
Q 015354 26 GNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG 105 (408)
Q Consensus 26 ~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~ 105 (408)
+.++|+++|++||+||++||||.||+.+|++||++||+.||++.++||+|||||||||+||++|+|+|+++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~ 81 (605)
T 1tf4_A 2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP 81 (605)
T ss_dssp CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccccccCCCceeECCCCCEeccchHHHHHHHHHHHHHhH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHH
Q 015354 106 KKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAAL 183 (408)
Q Consensus 106 ~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAal 183 (408)
+.| +|++||||||||||+|||||||++ ++.||.|||++..||.+|.+||+++.+|++|.++.++|||++++++||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~-~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAl 160 (605)
T 1tf4_A 82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPS-PNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAM 160 (605)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTCSB-TTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHH
T ss_pred HHHhhcCCcccHHHHHHHHHHHHHHhccC-CCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHH
Confidence 999 899999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 184 A~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
|+||||||++||+||++||++||++|+||+++|+.|.++++ .+++|+|++++.||++|||+|||+||||++|++++++
T Consensus 161 AaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~--~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~ 238 (605)
T 1tf4_A 161 AASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP--AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEY 238 (605)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST--THHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC--ccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999999987655 6889999899999999999999999999999999987
Q ss_pred c----CCCC------CCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecCC
Q 015354 264 V----GDDG------GTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKMP 333 (408)
Q Consensus 264 ~----~~~~------~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~~ 333 (408)
+ +... ..+.++||++..++++||+++. + .+.|++.++.++|.++.+.+++++++||+|+.|...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~----~~~y~~~a~~~~~~~~~~~~~~~~~~tp~Gl~~~~~ 312 (605)
T 1tf4_A 239 EYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--G----KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDT 312 (605)
T ss_dssp HGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--C----CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCS
T ss_pred HHHhcccccccccccccccccccchHHHHHHHHHhcc--C----hHHHHHHHHHHHHHHhcccCCCccccCCCcceecCC
Confidence 3 2111 1257999999999999988752 2 357999999999988766556789999999999899
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCC
Q 015354 334 ESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDS 407 (408)
Q Consensus 334 WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~ 407 (408)
||||||++|.+||+++|++++.+. .++++|+++|++|||||||+||++ ||||||| +|+|||||.
T Consensus 313 WGs~~~~~n~a~l~~~~a~~~~~~----------~~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~ 379 (605)
T 1tf4_A 313 WGALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRT 379 (605)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHH
T ss_pred ccHHHHHHHHHHHHHHHHHhcccc----------ccHHHHHHHHHHHHHHhcCCCCCCcceEecCCCCCCCCCcccc
Confidence 999999999999999999985211 245789999999999999999999 9999999 689999995
No 4
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=1.5e-97 Score=763.29 Aligned_cols=353 Identities=41% Similarity=0.702 Sum_probs=325.6
Q ss_pred chhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHHHHHHccc
Q 015354 27 NPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYGK 106 (408)
Q Consensus 27 ~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~~ 106 (408)
..+|+++|++||+||++||||.+|++++++||++||+.||++.++||+|||||||||+||++|+|+|+++|+|+++||++
T Consensus 2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~ 81 (433)
T 1ks8_A 2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA 81 (433)
T ss_dssp CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHH
Q 015354 107 KM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALA 184 (408)
Q Consensus 107 ~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA 184 (408)
.| +|++||||||||||+|||||||++ +|.||+|||++..||.+|++||+++++|++|+|+.++|||++++++|||||
T Consensus 82 ~~~~~~~~~d~ldeikwg~D~llk~~~~-~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA 160 (433)
T 1ks8_A 82 GYSSAGALDDGRKAVKWATDYFIKAHTS-QNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALA 160 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHCCB-TTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHH
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHhccC-CCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHH
Confidence 99 999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHHc
Q 015354 185 AASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSV 264 (408)
Q Consensus 185 ~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~~ 264 (408)
+||||||++||+||++||++||++|+||+++|+.|.++++. .+++|+| +++.||++|||+|||+||||++|+++++++
T Consensus 161 ~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~-~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~ 238 (433)
T 1ks8_A 161 AASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITD-ARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESL 238 (433)
T ss_dssp HHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGG-GGGTSCC-CCTHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCc-CCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999876664 6789999 999999999999999999999999999873
Q ss_pred ----CCCCCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecCCCCchHHH
Q 015354 265 ----GDDGGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKMPESNLQYV 340 (408)
Q Consensus 265 ----~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~ 340 (408)
+.......|+||++..+++++|+++. + .+.|++.++.++|.++. .+++||+|+.|...||||+++
T Consensus 239 ~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~----~~~~~~~~~~~~~~~~~-----~~~~tp~Gl~~~~~WGs~~~~ 307 (433)
T 1ks8_A 239 YDEFGLQNWGGGLNWDSKVSGVQVLLAKLT--N----KQAYKDTVQSYVNYLIN-----NQQKTPKGLLYIDMWGTLRHA 307 (433)
T ss_dssp HHHTTGGGSCCCCCSSCCHHHHHHHHHHHH--C----CHHHHHHHHHHHHHHHH-----TSCBCTTSCBCCCSTTHHHHH
T ss_pred HHhcCcCcCcCCcCccchhhHHHHHHhhcc--C----hHHHHHHHHHHHHHHHh-----cCCcCCCCceeecCCchhHHH
Confidence 32233568999999999999998752 2 35688888888887763 356899999998899999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCCCeeeeeC--CCCCCCCCC
Q 015354 341 TSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNKNVIHGWF--WTEFPEEDS 407 (408)
Q Consensus 341 ~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~SfVtG~G--~~~~Phh~~ 407 (408)
+|++|++++++++. +++.+|+++|++|||||||+|+ .||||||| +|+|||||.
T Consensus 308 ~n~a~l~~~~~~~~-------------~~~~~y~~~A~~qldYiLG~n~-~SyvvG~G~~~p~~pHHR~ 362 (433)
T 1ks8_A 308 ANAAFIMLEAAELG-------------LSASSYRQFAQTQIDYALGDGG-RSFVCGFGSNPPTRPHHRS 362 (433)
T ss_dssp HHHHHHHHHHHHTT-------------SSHHHHHHHHHHHHHHHHTTTS-SCCBTTSSSSCCSCCSCHH
T ss_pred HHHHHHHHHHHhcC-------------CCHHHHHHHHHHhHhhccCCCC-cceEeccCCCCCCCCcchh
Confidence 99999999998861 3678999999999999999983 29999999 689999995
No 5
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=2.9e-98 Score=796.19 Aligned_cols=370 Identities=25% Similarity=0.441 Sum_probs=324.8
Q ss_pred hccCchhHHHHHHHHHhhhHHhcCCCCCC-CCCCCCCCCCCCCCC--------------------------CCccccccc
Q 015354 23 NAHGNPNYREALAKSLLFFQGQRSGRLPK-DQQITWRSNSGLSDG--------------------------LFAHVDLTG 75 (408)
Q Consensus 23 ~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~-~~~~~Wrg~s~l~Dg--------------------------~~~~~dl~G 75 (408)
.++++++|.++|++||+||++||||.+|+ ++|++||++||++|+ .+.++||+|
T Consensus 33 ~~~~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~p~~~~~~~~~~~~~~~y~~~~~~~~~~~~DlsG 112 (611)
T 2yik_A 33 SAAGEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNTNMSDGFISSNRSVLDPDGDGKVDVSG 112 (611)
T ss_dssp -----CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGEECSTTTBSSCHHHHHHHHHHHCTTCSSEECCCC
T ss_pred cccchhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCcccccccccccccccccccccccccccccCCCCcccCCC
Confidence 37788999999999999999999999887 799999999999998 678899999
Q ss_pred ceeccCCCcccccchhHHHHHHHHHHHHccccc--CccHHHHHHHHHHHHHHHHhh-----ccCCCCceEEeeCCCCCCC
Q 015354 76 GYYDAGDNVKFNFPMAFTTTMLSWSTLEYGKKM--GPELQNARAAIRWATDYLLKC-----ATATPGKLYVGVGDPNADH 148 (408)
Q Consensus 76 GW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~~~~--~~~~~d~Lde~kwg~d~llk~-----~~~~~g~~y~qvg~~~~dh 148 (408)
||||||||+||++|+|+|+++|+|+++||++.| +|++||||||||||+|||||| |+. +|.||+|||++..||
T Consensus 113 GwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~-~g~~y~qVgdg~~Dh 191 (611)
T 2yik_A 113 GFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGN-VVAFCHQVGDGDIDH 191 (611)
T ss_dssp SBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSC-EEEEEEEESCHHHHT
T ss_pred CceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCC-CCcEEEEeCCCCccc
Confidence 999999999999999999999999999999999 889999999999999999999 676 999999999999999
Q ss_pred CCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcc
Q 015354 149 KCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVC 228 (408)
Q Consensus 149 ~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~ 228 (408)
.+|++||+++++|++|.|+.++|||++++++|||||+||||||++||+||++||++||++|+||++||+.|.++.+. .+
T Consensus 192 ~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~-~~ 270 (611)
T 2yik_A 192 AFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDG-PK 270 (611)
T ss_dssp TCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGGT-TT
T ss_pred cCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc-cC
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999776554 78
Q ss_pred cccCCCCccchHHHHHHHHHHHHcCChhHHHHHHHcCC--CCCCccccccchhHHHHHHHhhhcccc---cchhhHHHHH
Q 015354 229 PFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGD--DGGTDVFSWDNKFAGAHVLLARGALLN---RDKNFEPYRQ 303 (408)
Q Consensus 229 ~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~~~~--~~~~~~~~Wd~~~~~~~~lla~~~~~~---~~~~~~~~~~ 303 (408)
++|+| +++.||++|||+|||+||||++|+++++++.. ....+.++||++..++.+||+++.... .....+.|++
T Consensus 271 ~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~Wd~~~~g~~~lLa~~~~~~~~~~~~~~~~y~~ 349 (611)
T 2yik_A 271 GYYGS-SKWQDDYCWAAAWLYLATQNEHYLDEAFKYYDYYAPPGWIHCWNDVWSGTACILAEINDLYDKDSQNFEDRYKR 349 (611)
T ss_dssp TTSCC-CCSHHHHHHHHHHHHHHHCCHHHHHHHHHHCCTTSTTTSCSBTTBCHHHHHHHHHHHHHHHSTTSSHHHHHHHH
T ss_pred cCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCccCccccchHHHHHHHHhccccccccccchhHHHHH
Confidence 99999 99999999999999999999999999998522 234568999999999999888753210 1112345666
Q ss_pred HHHHH----------HHHhCCCCCCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhh
Q 015354 304 EAEDF----------ICRILPNSPFTTTQYTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLL 373 (408)
Q Consensus 304 ~ad~~----------~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y 373 (408)
.++.. +|+.+++.+++++++||+|+.|...||||||++|++|++++|++++. ..+++|
T Consensus 350 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~~~afl~~~ya~~~~------------~~~~~y 417 (611)
T 2yik_A 350 ASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQWGSARYNTAAQLIALVYDKHHG------------DTPSKY 417 (611)
T ss_dssp HTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCBCSCSTTHHHHHHHHHHHHHHHHHTTT------------SSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCceeccCCccccccCCCchHHHHHHHHHHHHHHHHhcC------------ccHHHH
Confidence 65543 22222223346889999999999999999999999999999998742 245799
Q ss_pred HHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCC
Q 015354 374 TRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDS 407 (408)
Q Consensus 374 ~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~ 407 (408)
+++|++|||||||+||++ ||||||| +|+|||||.
T Consensus 418 ~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~ 454 (611)
T 2yik_A 418 ANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRA 454 (611)
T ss_dssp HHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHH
T ss_pred HHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchh
Confidence 999999999999999999 9999999 589999994
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=1.5e-95 Score=775.09 Aligned_cols=361 Identities=36% Similarity=0.598 Sum_probs=328.4
Q ss_pred CchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHHHHHHHHHHcc
Q 015354 26 GNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSTLEYG 105 (408)
Q Consensus 26 ~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~~~~~ef~ 105 (408)
+.++|+++|++||+||++||||++|++++++||++||+.||.+.++||+|||||||||+||++|+|+|+++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~e~~ 81 (614)
T 1g87_A 2 GTYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDK 81 (614)
T ss_dssp -CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCcccccccccccCCCCeeeCCCCcEeccccHHHHHHHHHHHHHhH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc--CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHH
Q 015354 106 KKM--GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAAL 183 (408)
Q Consensus 106 ~~~--~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAal 183 (408)
+.| +|++||||||||||+|||||||++ +|.||+|||++..||.+|.+||+++.+|++|.|+.++|||++++++||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~-~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAl 160 (614)
T 1g87_A 82 DAYDKSGQTKYIMDGIKWANDYFIKCNPT-PGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASL 160 (614)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTCCS-TTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHH
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHhccC-CCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHH
Confidence 999 889999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 184 AAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 184 A~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
|+||||||++||+||++||++||++|+||+++|+.+.. + ..+++|+| +++.||++|||+|||+||||++|++++++
T Consensus 161 AaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~-~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~ 236 (614)
T 1g87_A 161 ASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGY--T-AASGYYSS-SSFYDDLSWAAVWLYLATNDSTYLDKAES 236 (614)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--C-TTTTTSCC-SCSHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCC--C-cCcCCcCC-CCchhHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999998642 3 26789999 99999999999999999999999999998
Q ss_pred c----CCC------CCCccccccchhHHHHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecCC
Q 015354 264 V----GDD------GGTDVFSWDNKFAGAHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKMP 333 (408)
Q Consensus 264 ~----~~~------~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~~ 333 (408)
+ +.. ...+.|+||+|..++++||+++. +. ..|++.++.+++.++.+.+++++++||+||+|...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~ 310 (614)
T 1g87_A 237 YVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLT--NK----QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQ 310 (614)
T ss_dssp TGGGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CC----HHHHHHHHHHHHHHTTCBTTBCCEECTTSCEECCS
T ss_pred HHHhhccccccccccccCCcCccchHHHHHHHHHhcc--Cc----HHHHHHHHHHHHHhhhccCCCccccCCCCceeccC
Confidence 4 210 12467999999999999998752 22 46788888888777766667889999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCCCeeeeeC--CCCCCCCCC
Q 015354 334 ESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNKNVIHGWF--WTEFPEEDS 407 (408)
Q Consensus 334 WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~SfVtG~G--~~~~Phh~~ 407 (408)
||||||++|++||+++|++++ .|+ ..++.+|+++|++|||||||+|+ .||||||| +|+|||||.
T Consensus 311 Wgs~~~~~n~afl~~~y~~~~-------~~~--~~~~~~y~~~A~~qidYiLG~n~-~SyvvG~G~~~p~~pHHR~ 376 (614)
T 1g87_A 311 WGSLRHATTQAFLAGVYAEWE-------GCT--PSKVSVYKDFLKSQIDYALGSTG-RSFVVGYGVNPPQHPHHRT 376 (614)
T ss_dssp SSHHHHHHHHHHHHHHHHHST-------TSC--HHHHHHHHHHHHHHHHHHHTTTS-SCCBTTSSSSCCSCCBCHH
T ss_pred CCcHHHHHHHHHHHHHHHHhh-------CCC--ccCHHHHHHHHHHHHHHhcCCCC-cceEeccCCCCCCCCcchh
Confidence 999999999999999999984 242 23478999999999999999983 29999999 689999995
No 7
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=5.8e-87 Score=713.08 Aligned_cols=353 Identities=16% Similarity=0.148 Sum_probs=303.0
Q ss_pred cCchhHHHHHHHHHhhhHHhcCC-CCCCCCCCC-CCCCCCCCCC--------CCcccccccceeccCCCcccccchhHHH
Q 015354 25 HGNPNYREALAKSLLFFQGQRSG-RLPKDQQIT-WRSNSGLSDG--------LFAHVDLTGGYYDAGDNVKFNFPMAFTT 94 (408)
Q Consensus 25 ~~~~~Y~~~l~~sl~fy~~QR~G-~l~~~~~~~-Wrg~s~l~Dg--------~~~~~dl~GGW~DAGD~~Ky~~~~a~s~ 94 (408)
-++++|.++|++||+||++|||| .||++++++ ||+++++.|+ ++.++||+|||||||||+||++|+|+++
T Consensus 124 I~~~~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~t~ 203 (639)
T 1clc_A 124 IAMNVYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGITV 203 (639)
T ss_dssp ECTTTTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHHHH
T ss_pred echhhhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHHHH
Confidence 35789999999999999999999 599999999 9887766665 6789999999999999999999999999
Q ss_pred HHHHHHHHHccccc----------CccHHHHHHHHHHHHHHHHhhccCCC-CceEEeeCCCCCCCCCCCCCCCCCCccce
Q 015354 95 TMLSWSTLEYGKKM----------GPELQNARAAIRWATDYLLKCATATP-GKLYVGVGDPNADHKCWERPEDMDTVRSV 163 (408)
Q Consensus 95 ~~L~~~~~ef~~~~----------~~~~~d~Lde~kwg~d~llk~~~~~~-g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~ 163 (408)
++|+|+++||++.| +|++||+|||||||+|||||||.+++ |.||||||++.+||. .+||+++.+|++
T Consensus 204 ~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~--~~Pe~~~~~R~~ 281 (639)
T 1clc_A 204 GSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGF--IMPENEHDERFF 281 (639)
T ss_dssp HHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCS--CCGGGCCSCCEE
T ss_pred HHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCC--CCchhcCCCceE
Confidence 99999999999876 57899999999999999999987536 999999999989986 999999999999
Q ss_pred EEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCC-CCCCCCCCcccccCCCCccchHHH
Q 015354 164 YSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGA-YSDSLGSAVCPFYCSYSGYKDELL 242 (408)
Q Consensus 164 ~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~-~~~~~~~~~~~~Y~s~~~~~De~~ 242 (408)
++ |+|++++++|||||+||||||++||+||++||++||++|+||+++|+. |.++.+ ..+++|+| ++|.||++
T Consensus 282 ~~-----~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~-~~~g~Y~s-s~~~DEl~ 354 (639)
T 1clc_A 282 VP-----WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSG-FSTGEYAT-VSDADDRL 354 (639)
T ss_dssp EE-----ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTT-CCSCCCCC-SCSHHHHH
T ss_pred ec-----CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCcc-ccccccCC-CCcchHHH
Confidence 87 479999999999999999999999999999999999999999999998 455433 37889999 99999999
Q ss_pred HHHHHHHHHcCChhHHHHHHHcC-C-C-CCCccccccchhHHHHHHHh-h--hcccc--cchhhHHHHHHHHHHHHHhCC
Q 015354 243 WGAAWLFRATNDVTYYNFIKSVG-D-D-GGTDVFSWDNKFAGAHVLLA-R--GALLN--RDKNFEPYRQEAEDFICRILP 314 (408)
Q Consensus 243 wAA~~Ly~aTgd~~Yl~~a~~~~-~-~-~~~~~~~Wd~~~~~~~~lla-~--~~~~~--~~~~~~~~~~~ad~~~~~~~~ 314 (408)
|||+|||+||||++|+++++++. . . .....|+||++..++.++|+ + ..+.+ .+..++.+++.++.+++.. +
T Consensus 355 WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~ 433 (639)
T 1clc_A 355 WAAAEMWETLGDEEYLRDFENRAAQFSKKIEADFDWDNVANLGMFTYLLSERPGKNPALVQSIKDSLLSTADSIVRTS-Q 433 (639)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHTCSSSCCSSCCTTCCHHHHHHHHHHCCCSCCCHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhc-c
Confidence 99999999999999999998741 1 1 12234599999998888776 2 22111 1345667888888888655 4
Q ss_pred CCCCCcccccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-Ce
Q 015354 315 NSPFTTTQYTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NV 393 (408)
Q Consensus 315 ~~~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-Sf 393 (408)
.++ ++++++ +...||||++++|.||+++++.++ +++.+|+++|++|||||||+||++ ||
T Consensus 434 ~~~-~g~~~~-----~~~~WGsn~~~~~~a~~~~~a~~l--------------~~~~~~~~~A~~qidYiLG~NP~~~Sy 493 (639)
T 1clc_A 434 NHG-YGRTLG-----TTYYWGCNGTVVRQTMILQVANKI--------------SPNNDYVNAALDAISHVFGRNYYNRSY 493 (639)
T ss_dssp TST-TCCTTT-----TCCCTTHHHHHHHTHHHHHHHHHH--------------SCCHHHHHHHHHHHHHHHTCSTTCCCS
T ss_pred CCC-CCcccC-----CCCCCchHHHHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHhhccCCCCCCceE
Confidence 443 455554 234799999999999999988765 367899999999999999999999 99
Q ss_pred eeeeC--CCCCCCCCC
Q 015354 394 IHGWF--WTEFPEEDS 407 (408)
Q Consensus 394 VtG~G--~~~~Phh~~ 407 (408)
||||| +|+|||||+
T Consensus 494 vvG~G~~~p~~pHHR~ 509 (639)
T 1clc_A 494 VTGLGINPPMNPHDRR 509 (639)
T ss_dssp BTTSSSSCCSSCBCHH
T ss_pred EEecCCCCCCCCcchh
Confidence 99999 589999995
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=4.2e-86 Score=694.01 Aligned_cols=356 Identities=20% Similarity=0.217 Sum_probs=300.9
Q ss_pred cCchhHHHHHHHHHhhhHHhcCCC-CCCCCCCCCCCCC-CCCC----CCCcccccccceeccCCCcccccchhHHHHHHH
Q 015354 25 HGNPNYREALAKSLLFFQGQRSGR-LPKDQQITWRSNS-GLSD----GLFAHVDLTGGYYDAGDNVKFNFPMAFTTTMLS 98 (408)
Q Consensus 25 ~~~~~Y~~~l~~sl~fy~~QR~G~-l~~~~~~~Wrg~s-~l~D----g~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~~L~ 98 (408)
-++++|.++|++||+||++||||+ +|+.++++||+++ |++| |.+.++||+|||||||||+||++|+|+|+++|+
T Consensus 83 I~~~~Y~~~l~~sl~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a~t~~~L~ 162 (537)
T 3gzk_A 83 IHRRAYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADLL 162 (537)
T ss_dssp EETTTTHHHHHHHHHHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHHHHHHHHH
T ss_pred eCcchHHHHHHHHHHHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHHHHHHHHH
Confidence 356899999999999999999999 9999999998765 5544 456889999999999999999999999999999
Q ss_pred HHHHHccccc---------Ccc--HHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcC
Q 015354 99 WSTLEYGKKM---------GPE--LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVS 167 (408)
Q Consensus 99 ~~~~ef~~~~---------~~~--~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~ 167 (408)
|++++|++.| +|+ +||||||||||+|||||||++++|.||||||+..+. ..|.+||+++.+|++++++
T Consensus 163 ~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~-g~~~~Pe~~~~~R~~~~~~ 241 (537)
T 3gzk_A 163 LAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFP-PLDTRPEDDDAPLVLSPIS 241 (537)
T ss_dssp HHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCC-CTTCCGGGCCSCEEECCBC
T ss_pred HHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcC-CCCcCcccCCCcceEeecC
Confidence 9999998876 567 999999999999999999985379999999985331 2348999999999999863
Q ss_pred CCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHH
Q 015354 168 ASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAW 247 (408)
Q Consensus 168 ~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~ 247 (408)
+..++++|||||+||||||++||+||++||++|+++|+|+++||+.+..+..+..+++|+| +++.||++|||+|
T Consensus 242 -----t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~-~~~~Del~wAA~~ 315 (537)
T 3gzk_A 242 -----YAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGD-AELRDELLWASCA 315 (537)
T ss_dssp -----HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCC-SCCHHHHHHHHHH
T ss_pred -----CcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCC-CccchHHHHHHHH
Confidence 5789999999999999999999999999999999999999999998643333346889999 9999999999999
Q ss_pred HHHHcCChhHHHHHHHcCCCCCCccccccchhHHHHH--HHhhhcccc---cchhhHHHHHHHHHHHHHhCCCCCCCccc
Q 015354 248 LFRATNDVTYYNFIKSVGDDGGTDVFSWDNKFAGAHV--LLARGALLN---RDKNFEPYRQEAEDFICRILPNSPFTTTQ 322 (408)
Q Consensus 248 Ly~aTgd~~Yl~~a~~~~~~~~~~~~~Wd~~~~~~~~--lla~~~~~~---~~~~~~~~~~~ad~~~~~~~~~~~~~~~~ 322 (408)
||+||||++|+++++++......+.|+||+|..++++ |+++..... .++.++.+++.++.++ ..++.+ +++++
T Consensus 316 Ly~aTgd~~Yl~~a~~~~~~~~~~~~~Wd~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ad~~~-~~~~~~-~~g~~ 393 (537)
T 3gzk_A 316 LLRMTGDSAWARVCEPLLDLDLPWELGWADVALYGVMDYLRTPRAAVSDDVRNKVKSRLLRELDALA-AMAESH-PFGIP 393 (537)
T ss_dssp HHHHHCCGGGHHHHHHHHHSCCCCCCSSSCCHHHHHHHHHTSCGGGSCHHHHHHHHHHHHHHHHHHH-HHHHHS-TTCCS
T ss_pred HHHHhCCHHHHHHHHHhhhccCCCccchHHhHHHHHHHHHhCccccCCHHHHHHHHHHHHHHHHHHH-HhccCC-CCcee
Confidence 9999999999999998521112368999999987764 445432111 2345677888888876 333433 46778
Q ss_pred ccCCCceecCCCCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHH-HhccccccCCCCCC-CeeeeeC--
Q 015354 323 YTQGGLMYKMPESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPR-KKTGGLYIRCEPNK-NVIHGWF-- 398 (408)
Q Consensus 323 ~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a-~~qidYiLG~NP~~-SfVtG~G-- 398 (408)
++|+|+ .||||++++|.+|+++++.++ .++.+|++++ ++|||||||+||++ |||||||
T Consensus 394 ~~~~~~----~WGsn~~~~n~a~~l~~a~~~--------------~~~~~y~~~aa~~qidYiLG~NP~~~SyVvG~G~~ 455 (537)
T 3gzk_A 394 MRDDDF----IWGSNMVLLNRAMAFLLAEGV--------------GVLHPAAHTVAQRAADYLFGANPLGQCYVTGFGQR 455 (537)
T ss_dssp CCGGGC----CTTHHHHHHHHHHHHHHHGGG--------------TCCCTTHHHHHHHHHHHHBTCSTTCCBCBBTCSSS
T ss_pred ecCCCC----cccchHHHHHHHHHHHHHhhc--------------cCCHHHHHHHHHHhHHHhcCCCCCCceeEecCCCC
Confidence 888775 699999999999999988775 3567899999 99999999999999 9999999
Q ss_pred CCCCCCCCC
Q 015354 399 WTEFPEEDS 407 (408)
Q Consensus 399 ~~~~Phh~~ 407 (408)
+|+|||||+
T Consensus 456 ~p~~pHHR~ 464 (537)
T 3gzk_A 456 PVRHPHHRP 464 (537)
T ss_dssp CBCSCBCHH
T ss_pred CCCCCcchh
Confidence 589999995
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=1.9e-83 Score=683.56 Aligned_cols=355 Identities=17% Similarity=0.200 Sum_probs=300.8
Q ss_pred CchhHHHHHHHHHhhhHHhcCCC---CCCCCCCCCCCC-CCCC--------C--------------CCCcccccccceec
Q 015354 26 GNPNYREALAKSLLFFQGQRSGR---LPKDQQITWRSN-SGLS--------D--------------GLFAHVDLTGGYYD 79 (408)
Q Consensus 26 ~~~~Y~~~l~~sl~fy~~QR~G~---l~~~~~~~Wrg~-s~l~--------D--------------g~~~~~dl~GGW~D 79 (408)
++++|.++|++||+||++||||. +|...++.|+++ ||++ | |.+.++||+|||||
T Consensus 97 ~~~~Y~~~l~~sl~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~Dl~GGwyD 176 (609)
T 1ut9_A 97 RKDIYTQMKYDALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWYD 176 (609)
T ss_dssp CTTTTTTHHHHHHHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEECCCCSBCC
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceecCCCCeee
Confidence 56789999999999999999996 566667789865 5555 4 34678999999999
Q ss_pred cCCCcccccchhHHHHHHHHHHHHccc-------cc----------CccHHHHHHHHHHHHHHHHhhccCCCC---ceEE
Q 015354 80 AGDNVKFNFPMAFTTTMLSWSTLEYGK-------KM----------GPELQNARAAIRWATDYLLKCATATPG---KLYV 139 (408)
Q Consensus 80 AGD~~Ky~~~~a~s~~~L~~~~~ef~~-------~~----------~~~~~d~Lde~kwg~d~llk~~~~~~g---~~y~ 139 (408)
||||+||++||++++++|++.|+.|++ .| +|++||||||||||+|||||||.+ +| .+|.
T Consensus 177 AGD~~K~~~p~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~-~g~~~~~~g 255 (609)
T 1ut9_A 177 AGDHGKYVVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVT-EKEDPSIAG 255 (609)
T ss_dssp SSSSCEEHHHHHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCC-TTTCGGGTT
T ss_pred CCCCCeecCchHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccC-CCCcceEEE
Confidence 999999999999999888888876532 22 478999999999999999999998 77 7889
Q ss_pred eeCCCCCCCCCC---CCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcC
Q 015354 140 GVGDPNADHKCW---ERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYR 216 (408)
Q Consensus 140 qvg~~~~dh~~w---~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p 216 (408)
|||++..||.+| .+||+++.+|++. +|+|++++++|||||+||||||++||+||++||++||++|+||+++|
T Consensus 256 ~v~~~~~D~~w~g~~~~Pe~~~~~R~~~-----~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~ 330 (609)
T 1ut9_A 256 MVHHKIHDFRWTALGMLPHEDPQPRYLR-----PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHP 330 (609)
T ss_dssp CEECEEEESSCCCSSCCGGGCCSBEEEC-----CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred EecCCCCCcccCCCCCChhhCCCceeec-----CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 999988999777 5899999999873 48999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC---CCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHHcCC------------------CCCCccccc
Q 015354 217 GAYSDSLG---SAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKSVGD------------------DGGTDVFSW 275 (408)
Q Consensus 217 ~~~~~~~~---~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~~~~------------------~~~~~~~~W 275 (408)
+.|.+.++ ...+++|+| +++.||++|||+|||+||||++|+++++++.. ......|+|
T Consensus 331 ~~y~~~~~~~~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~W 409 (609)
T 1ut9_A 331 DIYAEYTPGSGGPGGGPYND-DYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTW 409 (609)
T ss_dssp TCCBCCCCSSSSCBSCCCCB-SCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCS
T ss_pred ccccccccccCccCCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccch
Confidence 99976632 346889999 89999999999999999999999999998421 012246999
Q ss_pred cchhHHHHHHHhhhc--ccc--cchhhHHHHHHHHHHHHHhCCCCCCCccc-----ccCCCceecCCCCchHHHHHHHHH
Q 015354 276 DNKFAGAHVLLARGA--LLN--RDKNFEPYRQEAEDFICRILPNSPFTTTQ-----YTQGGLMYKMPESNLQYVTSISFL 346 (408)
Q Consensus 276 d~~~~~~~~lla~~~--~~~--~~~~~~~~~~~ad~~~~~~~~~~~~~~~~-----~tp~Gl~~~~~WGs~~~~~n~a~l 346 (408)
|+|..+++++|+.+. +.+ .++.++.+++.++.|+|...+. +++++ +||+|+ .||||||++|++|+
T Consensus 410 d~~~~~~~~lla~~~~~l~~~~~~~~~~~~~~~ad~~~~~~~~~--~~g~~~~~~~~t~gg~----~WGs~~~~~n~a~~ 483 (609)
T 1ut9_A 410 GTTQGLGTITLALVENGLPATDIQKARNNIAKAADRWLENIEEQ--GYRLPIKQAEDERGGY----PWGSNSFILNQMIV 483 (609)
T ss_dssp SCCHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHTC--TTCCSCCCCSSSSCSC----CTTHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhhccC--CCCccccccccCCCCc----ccccCHHHHHHHHH
Confidence 999999999888431 221 1345677888999999887544 24444 457786 69999999999999
Q ss_pred HHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeC--CCCCCCCCC
Q 015354 347 LTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWF--WTEFPEEDS 407 (408)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G--~~~~Phh~~ 407 (408)
++++.++ ++..+|+++|++|||||||+||++ ||||||| +|+|||||.
T Consensus 484 ~~~a~~~--------------~~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~ 533 (609)
T 1ut9_A 484 MGYAYDF--------------TGDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRF 533 (609)
T ss_dssp HHHHHHH--------------HCCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSS
T ss_pred HHHHHHh--------------cChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCcccc
Confidence 9888776 357899999999999999999999 9999999 589999993
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-65 Score=538.41 Aligned_cols=339 Identities=18% Similarity=0.207 Sum_probs=250.8
Q ss_pred CchhH-HHHHHHHHhhhHHhcCCCC--CCCCCCCCCCCCCCCCCCCcccccccceecc-CCCcccccchhHHH-------
Q 015354 26 GNPNY-REALAKSLLFFQGQRSGRL--PKDQQITWRSNSGLSDGLFAHVDLTGGYYDA-GDNVKFNFPMAFTT------- 94 (408)
Q Consensus 26 ~~~~Y-~~~l~~sl~fy~~QR~G~l--~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DA-GD~~Ky~~~~a~s~------- 94 (408)
++++| .++++++|+||++||||.+ |.+.+++|+++ +.++||+|||||| |||+||++|+|||+
T Consensus 92 ~~~vy~~~~l~~sl~ff~~QRsG~~~~~~d~~~~~~~~-------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~~npqQ~ 164 (586)
T 3h7l_A 92 GEHILLNQTLSDVIHYFKSQRCGGVFDQQDRQVPVLNA-------NQTADVHGGWYDASGDVSKYLSHLSYANYLNPQQT 164 (586)
T ss_dssp ETTHHHHHHHHHHHHHHHHTBCCHHHHHHTTSEEETTT-------TEEECCCCSBCSBTTBCCEESCCCGGGSSCCCCCH
T ss_pred ccchhhHHHHHHHHHHHHHhcCCCCCCCCCceeeecCC-------CceeecccccccCCCCcceeccchhhhhhcccchh
Confidence 45786 8999999999999999974 56678899874 6689999999999 99999999999887
Q ss_pred HHHHHHHHHccccc-------CccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccce--EE
Q 015354 95 TMLSWSTLEYGKKM-------GPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSV--YS 165 (408)
Q Consensus 95 ~~L~~~~~ef~~~~-------~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~--~~ 165 (408)
++|+|+++++.+.+ ..++||||||||||+|||||||++ +|.||+||||+ |..+ +++|.+ +.
T Consensus 165 ~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~-~g~~y~qVgd~------W~~d---~~~R~~~~~~ 234 (586)
T 3h7l_A 165 PMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNE-KGFFYMTVFDK------WSKD---TAQREICAYE 234 (586)
T ss_dssp HHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCT-TSCBBCEEECT------TCCC---GGGCEEEEEE
T ss_pred hHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccC-CCeEEEEecCC------CCCC---CCcccccccc
Confidence 47777766554443 124899999999999999999999 99999999984 6532 456765 33
Q ss_pred cCCCCcc-------chHHHHHHHHHHHhcccccCCCHHH-HHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCcc
Q 015354 166 VSASNPG-------SDVAGETAAALAAASLVFRKGDPRY-ASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGY 237 (408)
Q Consensus 166 ~~~~~pg-------s~~~~~~AAalA~as~vfk~~D~~~-A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~ 237 (408)
+..+.|+ +..++.+|||||+|||||+ |++| +++||++|+++|+|++++|+.|.++ ++ +++
T Consensus 235 ~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~--d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~---------g~-~~~ 302 (586)
T 3h7l_A 235 TQLGHKFDDYQAGFRQGGGVAIAALAAASRLGV--HGEYDQQKYRNAAENGYWHLKEHNTQYLND---------GE-ENI 302 (586)
T ss_dssp TTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSS--CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT---------SC-CCH
T ss_pred CCCCCCCcceecCCCCcHHHHHHHHHHHhcccC--CCCcChHHHHHHHHHHHHHHHhcCccccCC---------CC-ccc
Confidence 2221111 2456789999999999998 7899 9999999999999999999877532 13 678
Q ss_pred chHH--HHHHHHHHHHcCChhHHHHHHHc----C-C--CCCCccccccc------------hhHHHHHHHhhh-cccc--
Q 015354 238 KDEL--LWGAAWLFRATNDVTYYNFIKSV----G-D--DGGTDVFSWDN------------KFAGAHVLLARG-ALLN-- 293 (408)
Q Consensus 238 ~De~--~wAA~~Ly~aTgd~~Yl~~a~~~----~-~--~~~~~~~~Wd~------------~~~~~~~lla~~-~~~~-- 293 (408)
.||+ +|||+|||+||||++||++++++ . . ......+.|.. ......+-|++. ...+
T Consensus 303 ~De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~ 382 (586)
T 3h7l_A 303 IDEYCALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDS 382 (586)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCST
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCCh
Confidence 9999 99999999999999999999872 1 1 11234577874 333333322221 1122
Q ss_pred --cchhhHHHHHHHHHHHH-------------HhCC-----CCCCCcccccC-CCceecCCC-CchHHHHHHHHHHHHHH
Q 015354 294 --RDKNFEPYRQEAEDFIC-------------RILP-----NSPFTTTQYTQ-GGLMYKMPE-SNLQYVTSISFLLTTYA 351 (408)
Q Consensus 294 --~~~~~~~~~~~ad~~~~-------------~~~~-----~~~~~~~~~tp-~Gl~~~~~W-Gs~~~~~n~a~l~~~~~ 351 (408)
.+.+++.++..++.++. .+++ +..+|+++..+ .|+ .| |||++++|.|+++++++
T Consensus 383 ~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y----~WqGsN~~~an~a~~~~~a~ 458 (586)
T 3h7l_A 383 VQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGY----WWQGENARLGSLATMAYLAQ 458 (586)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSS----CCCCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCC----eeeChHHHHHHHHHHHHHHH
Confidence 22334455555554331 1110 11134444443 332 59 99999999999999988
Q ss_pred HHHHhcccccccCCcccChhhhHHHHHhccccccCCCCCC-CeeeeeCCCCCCCCCCC
Q 015354 352 KYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIRCEPNK-NVIHGWFWTEFPEEDSS 408 (408)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~-SfVtG~G~~~~Phh~~~ 408 (408)
+++.+. ...++|+++|++|||||||+||++ |||||+| .++||||++
T Consensus 459 ~~~~~~----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G-~~~p~~r~~ 505 (586)
T 3h7l_A 459 PHIASQ----------EIQQQLSVFAQDALNWIVGLNPYDMCMLDGHG-RNNPDYLPQ 505 (586)
T ss_dssp GGCCCH----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSS-SCCCCSBGG
T ss_pred HhcCCc----------hhHHHHHHHHHHhhhhhccCCCCCCccEEeeC-CCCCccCcc
Confidence 873100 013899999999999999999999 9999999 889999864
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.19 E-value=0.032 Score=54.93 Aligned_cols=110 Identities=10% Similarity=-0.040 Sum_probs=69.3
Q ss_pred HHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhccc-ccCCCHHHHHHHHH
Q 015354 125 YLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLV-FRKGDPRYASLLLR 203 (408)
Q Consensus 125 ~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~v-fk~~D~~~A~~~l~ 203 (408)
|+..+++. .|+||+++.. |.. ..|. ++ ..-..|.++.++|.|+++ ++ +| .+++
T Consensus 24 w~~~~~D~-~GGf~~~~~~---d~~--~~~~----eK----------~l~~nar~i~~~a~a~~~~~~--~~----~~~~ 77 (388)
T 2gz6_A 24 WENHSLDS-EGGYFTCLDR---QGK--VYDT----DK----------FIWLQNRQVWTFSMLCNQLEK--RE----NWLK 77 (388)
T ss_dssp HHHHCBCT-TSSBCCEEBT---TSC--EEEC----CE----------EHHHHHHHHHHHHHHHHHTCC--CH----HHHH
T ss_pred HHhcCCCC-CCCEEeEECC---CCC--cCCc----ch----------hHHHHHHHHHHHHHHHHHhcC--CH----HHHH
Confidence 33668888 8999999964 211 1122 11 234458899999999998 65 44 5678
Q ss_pred HHHHHHHHHHHc----CCCCCCCC-CCCcccccCCCCcc-ch--HHHHHHHHHHHHcCChhHHHHHHH
Q 015354 204 TAKNVLQFAMQY----RGAYSDSL-GSAVCPFYCSYSGY-KD--ELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 204 ~A~~~~~~a~~~----p~~~~~~~-~~~~~~~Y~s~~~~-~D--e~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
.|++..+|..++ .|.+.... .+ +.+.-. ... .| =+++|.+++|++||++.|++.|++
T Consensus 78 ~A~~~~~~l~~~~~~~~Gg~~~~~d~d-g~~~~~--~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~ 142 (388)
T 2gz6_A 78 IARNGAKFLAQHGRDDEGNWYFALTRG-GEPLVQ--PYNIFSDCFAAMAFSQYALASGEEWAKDVAMQ 142 (388)
T ss_dssp HHHHHHHHHHHHSBCTTSCBCSEECTT-SCBCCC--CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCC-CCcccC--CcchHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 889999999876 22221111 11 111110 111 12 256788899999999999999887
No 12
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.98 E-value=0.046 Score=54.62 Aligned_cols=144 Identities=13% Similarity=0.090 Sum_probs=82.1
Q ss_pred CcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHh-hccCCC-CceEEeeCCCCCCCCCCCCCCCCCCc
Q 015354 83 NVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLK-CATATP-GKLYVGVGDPNADHKCWERPEDMDTV 160 (408)
Q Consensus 83 ~~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk-~~~~~~-g~~y~qvg~~~~dh~~w~~Pe~~~~~ 160 (408)
..|.+.-.+--+..++.++..+ +.|..++.++.+++||++ |.++ + |++|+.+-++ .|.+. .
T Consensus 47 ~~k~l~~n~r~i~~~a~a~~~~------g~~~~l~~A~~~~~fl~~~~~d~-~~Gg~~~~~~dG--------~~~~~--~ 109 (402)
T 3gt5_A 47 THRHLVSSTRFVFNYAMAYLQF------GTAEYLDAVHHGLSYVRDVHRNP-ATGGYAWTLCDD--------RVEDD--T 109 (402)
T ss_dssp SEEEHHHHHHHHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHTTBCT-TTSCBCSEEETT--------EEEEC--C
T ss_pred CchhHHHHHHHHHHHHHHHHhh------CChHHHHHHHHHHHHHHHhCccC-CCCcEEEEeeCC--------CCCcC--C
Confidence 3477766666666666666554 458999999999999998 4454 4 8888887321 12111 1
Q ss_pred cceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCC-CCCcccccCCC
Q 015354 161 RSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY-----RGAYSDSL-GSAVCPFYCSY 234 (408)
Q Consensus 161 R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~-----p~~~~~~~-~~~~~~~Y~s~ 234 (408)
+.+| + .+-+++|++. ..+..|+. .|+.|+++++...++ .|.|.+.. ++.....|.
T Consensus 110 ~~ly---------d---~Af~i~al~~-~~~tgd~~----~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~-- 170 (402)
T 3gt5_A 110 NHCY---------G---LAFVMLAYSC-GLKVGIKQ----AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYR-- 170 (402)
T ss_dssp EEHH---------H---HHHHHHHHHH-HHHTTCTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCE--
T ss_pred cchH---------H---HHHHHHHHHH-HHHhCChh----HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCC--
Confidence 1111 1 2222233333 22234554 566777777777764 23333211 100001111
Q ss_pred CccchH--HHHHHHHHHHHcCChhHHHHHHH
Q 015354 235 SGYKDE--LLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 235 ~~~~De--~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
...+- ++-|.+.||++||++.|++.+++
T Consensus 171 -~~n~~m~l~eall~L~~~tgd~~~~~~a~~ 200 (402)
T 3gt5_A 171 -GQNANMHMCEAMLAAYEASGEQRYLERALV 200 (402)
T ss_dssp -EHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 12222 46679999999999999999876
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=96.71 E-value=0.11 Score=51.12 Aligned_cols=178 Identities=12% Similarity=0.031 Sum_probs=103.7
Q ss_pred HHHHHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCcccccchhHHHH
Q 015354 16 LFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVKFNFPMAFTTT 95 (408)
Q Consensus 16 ~~~~~~~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DAGD~~Ky~~~~a~s~~ 95 (408)
..+.-....-++..|.+++.+.+.|...+..+.+ ..+++| | +++-+.
T Consensus 53 ~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~------------------------~~~~~D--D-------~a~~~l 99 (349)
T 3k7x_A 53 EVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTL------------------------IHDFYD--D-------MLWNAL 99 (349)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSS------------------------CCSBHH--H-------HHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCC------------------------CccCcc--H-------HHHHHH
Confidence 4444444456888999999999998764321111 223344 3 333222
Q ss_pred HHHHHHHHcccccCccHHHHHHHHHHHHHHH-HhhccCC-CCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccc
Q 015354 96 MLSWSTLEYGKKMGPELQNARAAIRWATDYL-LKCATAT-PGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGS 173 (408)
Q Consensus 96 ~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~l-lk~~~~~-~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs 173 (408)
.++-+|+. .+-|..|+.++-..++| ..-.++. .|+|+-++. +..|+. +
T Consensus 100 a~~~aye~------t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~------------------~~~~kn------a 149 (349)
T 3k7x_A 100 AAYRLYKA------TGKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP------------------QMYYKN------T 149 (349)
T ss_dssp HHHHHHHH------HCCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT------------------EEEEEE------H
T ss_pred HHHHHHHH------HCCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC------------------Cccccc------h
Confidence 22222322 25678899999999998 4443331 355554431 122331 2
Q ss_pred hHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc---C-CCCCCCCCCCcccccCC-CCcc---chHHHHHH
Q 015354 174 DVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY---R-GAYSDSLGSAVCPFYCS-YSGY---KDELLWGA 245 (408)
Q Consensus 174 ~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~---p-~~~~~~~~~~~~~~Y~s-~~~~---~De~~wAA 245 (408)
-..+.++.++|..++++. |+ ++++.|++.|+|..++ | +.+.+.......+ +.. ...| .--++.|+
T Consensus 150 isN~~~~~~la~l~~~tg--d~----~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g-~~~~~~~~tYnqg~~l~g~ 222 (349)
T 3k7x_A 150 PVNAPFIILSCWLYNELN--ET----KYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDG-TIDYEWKFTYNQGVYIGAN 222 (349)
T ss_dssp HHHHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSS-CBCTTCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCC-ccCCcCeeeHHHHHHHHHH
Confidence 234567777888888876 43 6788899999999874 2 2222321100001 111 0112 23588999
Q ss_pred HHHHHHcCChhHHHHHHH
Q 015354 246 AWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 246 ~~Ly~aTgd~~Yl~~a~~ 263 (408)
++||++|||++|++.+++
T Consensus 223 ~~LY~~T~d~~yl~~a~~ 240 (349)
T 3k7x_A 223 LELYRITKEAIYLDTANK 240 (349)
T ss_dssp HHHHHHHCCHHHHHHHHH
T ss_pred HHHHHhhCcHHHHHHHHH
Confidence 999999999999999987
No 14
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.48 E-value=0.071 Score=52.42 Aligned_cols=146 Identities=12% Similarity=0.007 Sum_probs=86.4
Q ss_pred cccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhh-ccCCCCceEEeeCCCCCCCCCCCCCCCCCCccc
Q 015354 84 VKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKC-ATATPGKLYVGVGDPNADHKCWERPEDMDTVRS 162 (408)
Q Consensus 84 ~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~-~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~ 162 (408)
-|...-.|-.+..++.++... -+-|..++.++-+++||++- +++ +|++|+.+.. | +.|.+. .+.
T Consensus 49 eK~l~~nar~i~~~a~a~~~~-----~~~~~~~~~A~~~~~~l~~~~~~~-~Gg~~~~~d~---d----g~~~~~--~~~ 113 (388)
T 2gz6_A 49 DKFIWLQNRQVWTFSMLCNQL-----EKRENWLKIARNGAKFLAQHGRDD-EGNWYFALTR---G----GEPLVQ--PYN 113 (388)
T ss_dssp CEEHHHHHHHHHHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHSBCT-TSCBCSEECT---T----SCBCCC--CCC
T ss_pred chhHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcC---C----CCcccC--Ccc
Confidence 476666666665565555441 14578999999999999986 666 7899988742 1 122111 111
Q ss_pred eEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcC----CCCCCCCCCCcccccCCCCccc
Q 015354 163 VYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYR----GAYSDSLGSAVCPFYCSYSGYK 238 (408)
Q Consensus 163 ~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p----~~~~~~~~~~~~~~Y~s~~~~~ 238 (408)
...-+-++.+|+.++++.. |+ +.|+.|+++.++..++- +.+....++ . ..+.. .+..
T Consensus 114 ----------~~~~af~i~al~~~y~~tg--~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~-~-~~~~~-~~~~ 174 (388)
T 2gz6_A 114 ----------IFSDCFAAMAFSQYALASG--EE----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPG-T-RPMKA-LAVP 174 (388)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHTC---------------C-CCCEE-THHH
T ss_pred ----------hHHHHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHHHhcCCCcccCcccCC-C-CCCCC-CCHH
Confidence 1223456777777788864 45 45677777777776641 222211111 0 11111 1111
Q ss_pred hHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 239 DELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 239 De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
--++.|.+.||++|+++.|++.+.+
T Consensus 175 ~~~~~all~l~~~t~d~~~~~~A~~ 199 (388)
T 2gz6_A 175 MILANLTLEMEWLLPQETLENVLAA 199 (388)
T ss_dssp HHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 1456788999999999999998877
No 15
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=94.73 E-value=0.51 Score=46.25 Aligned_cols=69 Identities=19% Similarity=0.256 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHH---HHHHHHHHc
Q 015354 176 AGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLW---GAAWLFRAT 252 (408)
Q Consensus 176 ~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~w---AA~~Ly~aT 252 (408)
.+.+-.+|.-++++.. |++| ++.|++...+.....+.+ .. .++.||..| |.+.+|++|
T Consensus 48 ~a~~~~~l~d~~~~tg--d~~y----~~~a~~~~~~~~~~~~~~-----------~~--~~~~DD~a~~~la~~~aye~t 108 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTK--KQAD----LEVAEKTYLHNKNRNGGT-----------LI--HDFYDDMLWNALAAYRLYKAT 108 (349)
T ss_dssp HHHHHHHHHHHHHHHC--CHHH----HHHHHHHHHHHHHHTTSS-----------SC--CSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC--CHHH----HHHHHHHHHHHHhcCCCC-----------CC--ccCccHHHHHHHHHHHHHHHH
Confidence 3445689999999875 5554 556666666665421110 11 345566655 889999999
Q ss_pred CChhHHHHHHH
Q 015354 253 NDVTYYNFIKS 263 (408)
Q Consensus 253 gd~~Yl~~a~~ 263 (408)
|+++||+.+++
T Consensus 109 ~~~~yL~~A~~ 119 (349)
T 3k7x_A 109 GKSIYLEDAQL 119 (349)
T ss_dssp CCHHHHHHHHH
T ss_pred CCchHHHHHHH
Confidence 99999998876
No 16
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=94.45 E-value=0.58 Score=46.49 Aligned_cols=234 Identities=17% Similarity=0.181 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHhhccCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCC-CCCCCC--------------------
Q 015354 7 VSLRCCCLFLFLLLIENAHGNPNYREALAKSLLFFQGQRSGRLPKDQQITWRS-NSGLSD-------------------- 65 (408)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg-~s~l~D-------------------- 65 (408)
+.+-+.||.+++..... -++..|.++.+.++.|.... ..-|+.-+.-|.- +....|
T Consensus 51 l~~n~r~i~~~a~a~~~-~g~~~~l~~A~~~~~fl~~~--~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~~~~ 127 (402)
T 3gt5_A 51 LVSSTRFVFNYAMAYLQ-FGTAEYLDAVHHGLSYVRDV--HRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSCGLK 127 (402)
T ss_dssp HHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHT--TBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHHHHh--CccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHHHHH
Confidence 44567777777554332 37889999999999888532 1122211111210 000000
Q ss_pred -CCC---------------cccc-cccceecc--CCCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHH
Q 015354 66 -GLF---------------AHVD-LTGGYYDA--GDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYL 126 (408)
Q Consensus 66 -g~~---------------~~~d-l~GGW~DA--GD~~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~l 126 (408)
|.. .-.| ..||++++ +|...-..+...+...|+-++++..+..+ -+..++.++.-++.+
T Consensus 128 tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tg--d~~~~~~a~~l~~~~ 205 (402)
T 3gt5_A 128 VGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASG--EQRYLERALVLADRI 205 (402)
T ss_dssp TTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHH
T ss_pred hCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhC--CHHHHHHHHHHHHHH
Confidence 000 0123 35788753 34221111233333334333333222222 366788888888888
Q ss_pred Hhh--ccCCCCceEEeeCCCCCCCC-C--CCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHH
Q 015354 127 LKC--ATATPGKLYVGVGDPNADHK-C--WERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLL 201 (408)
Q Consensus 127 lk~--~~~~~g~~y~qvg~~~~dh~-~--w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~ 201 (408)
++- .++ +|.+...+.. ++... . ...|.+. .|+ +.+ +||-+. |.+--|-.++++.. |+ ++
T Consensus 206 ~~~f~~~~-~g~l~e~~~~-dw~~~~~~~~~~~~~~--~~~-~~~---~pGH~i--E~awlLl~~~~~~~--~~----~~ 269 (402)
T 3gt5_A 206 TRRQAAKA-DGLVWEHYDM-RWEVDWDYNRDNPKHL--FRP-WGF---QPGHQT--EWAKLLLILDRYIE--VE----WL 269 (402)
T ss_dssp HTHHHHTT-TTSCCSEECT-TSCBCTTTTTTSTTCS--SSC-SSB---CHHHHH--HHHHHHHHHHHHCC--CT----TH
T ss_pred HHHhhCcc-CCeeEEEECC-CCCCccccccCCcccc--cCc-CCC---CCChHH--HHHHHHHHHHHhhC--cH----HH
Confidence 764 333 6766555543 11100 0 1112111 122 112 467654 45555556666643 33 47
Q ss_pred HHHHHHHHHHHHHc------CCCCCCCCCCCcccccCCCCcc--chHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 202 LRTAKNVLQFAMQY------RGAYSDSLGSAVCPFYCSYSGY--KDELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 202 l~~A~~~~~~a~~~------p~~~~~~~~~~~~~~Y~s~~~~--~De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
++.|+++++++.++ .+.+.....+ ..+.-.+ ..+ .-|.+-|++.||+.|||+.|++.+++
T Consensus 270 ~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~-g~~~~~~-k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~ 337 (402)
T 3gt5_A 270 VPVARSLFDVAVARSWDAVRGGLCYGFAPD-GTICDDD-KYFWVQAESLAAAALLATRSGDERYWQWYDR 337 (402)
T ss_dssp HHHHHHHHHHHHHHHBCTTTCSBCSEECTT-SCEEECC-EEHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCcEEEEEcCC-CCeeeCC-cceeHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 77788888877653 2222211111 1111111 222 24888889999999999999998876
No 17
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=92.95 E-value=0.88 Score=44.82 Aligned_cols=119 Identities=13% Similarity=0.079 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHH-hhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccc--c
Q 015354 115 ARAAIRWATDYLL-KCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF--R 191 (408)
Q Consensus 115 ~Lde~kwg~d~ll-k~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vf--k 191 (408)
+.+|+.=.+.+++ .+.+...|+|++.+.. |.. |-.. ++ ..-..+.+..++|.|++++ .
T Consensus 15 l~~~~~~~l~~w~~~~~D~~~GGf~~~~~~---dg~----~~~~--~k----------~l~~nar~l~~~a~a~~~~~~~ 75 (402)
T 1fp3_A 15 VGQELDRVMAFWLEHSHDREHGGFFTCLGR---DGR----VYDD--LK----------YVWLQGRQVWMYCRLYRKLERF 75 (402)
T ss_dssp HHHHHHHHHHHHHHHSBCTTTSSBCCCBCT---TSC----BSCC--CE----------EHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHhhccCCCCCCCCEeeEECC---CCC----CCCC--cc----------chhhhHHHHHHHHHHHHHhccc
Confidence 4455566677877 6777657788888864 211 2111 11 2344578899999999998 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcc-cccCCC---------Ccc---chHHHHHHHHHHHHcCChhHH
Q 015354 192 KGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVC-PFYCSY---------SGY---KDELLWGAAWLFRATNDVTYY 258 (408)
Q Consensus 192 ~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~-~~Y~s~---------~~~---~De~~wAA~~Ly~aTgd~~Yl 258 (408)
. +| ++++.|++..+|..++= +.. + .+ ++|.+. ..+ .--++||.+++|++||+..|+
T Consensus 76 ~-~~----~~l~~A~~~~~fl~~~~--~d~---~-gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~ 144 (402)
T 1fp3_A 76 H-RP----ELLDAAKAGGEFLLRHA--RVA---P-PEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQ 144 (402)
T ss_dssp C-CH----HHHHHHHHHHHHHHHHT--BSS---T-TSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred C-CH----HHHHHHHHHHHHHHHhc--cCc---C-CCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHH
Confidence 2 33 67888999999998751 110 0 11 222110 011 124688999999999999999
Q ss_pred HHHHH
Q 015354 259 NFIKS 263 (408)
Q Consensus 259 ~~a~~ 263 (408)
+.|.+
T Consensus 145 ~~A~~ 149 (402)
T 1fp3_A 145 SEAVD 149 (402)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 18
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=92.41 E-value=0.49 Score=47.39 Aligned_cols=130 Identities=18% Similarity=0.123 Sum_probs=76.1
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccc
Q 015354 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (408)
Q Consensus 111 ~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vf 190 (408)
+-++.++.+.=.+|+|+.-..+ .+++....+.. +.|. +.++ .| |. .....+|+-|++++
T Consensus 131 g~~~~~~~~~~aA~~L~~r~~~-~~g~iqsw~~~-------~~~~----~~~~-iI-------D~-~mni~~L~~A~~~~ 189 (397)
T 2zzr_A 131 GDVKALEATIKAADKLMERYQE-KGGFIQAWGEL-------GYKE----HYRL-II-------DC-LLNIQLLFFAYEQT 189 (397)
T ss_dssp CCHHHHHHHHHHHHHHHTTEET-TTTEECCSSST-------TCGG----GCEE-ET-------TH-HHHTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCc-CCCEEEecccC-------CCCC----CCce-ee-------ch-HhHHHHHHHHHHHh
Confidence 3466888888899999876555 44433333210 1111 2223 23 22 34678999999998
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcCC-CCCCC--CCCCcccccC-CCCccchH---------HHHHHHHHHHHcCChhH
Q 015354 191 RKGDPRYASLLLRTAKNVLQFAMQYRG-AYSDS--LGSAVCPFYC-SYSGYKDE---------LLWGAAWLFRATNDVTY 257 (408)
Q Consensus 191 k~~D~~~A~~~l~~A~~~~~~a~~~p~-~~~~~--~~~~~~~~Y~-s~~~~~De---------~~wAA~~Ly~aTgd~~Y 257 (408)
. ||.|.+...+||....+......+ .|+.. .+..+....+ ...++.|| +++|.++||++|+|+.|
T Consensus 190 g--d~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~y 267 (397)
T 2zzr_A 190 G--DEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQ 267 (397)
T ss_dssp C--CHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred C--CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHH
Confidence 6 788877777777766665532112 12210 0100111000 01344454 57788999999999999
Q ss_pred HHHHHH
Q 015354 258 YNFIKS 263 (408)
Q Consensus 258 l~~a~~ 263 (408)
|+.|++
T Consensus 268 L~~A~~ 273 (397)
T 2zzr_A 268 IILFKG 273 (397)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999987
No 19
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=91.97 E-value=2.3 Score=41.67 Aligned_cols=56 Identities=11% Similarity=0.109 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCccccc-----CCCCccchHHHHHH---HHHHHHcCChhHHHHHHH
Q 015354 200 LLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFY-----CSYSGYKDELLWGA---AWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 200 ~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y-----~s~~~~~De~~wAA---~~Ly~aTgd~~Yl~~a~~ 263 (408)
++++.|+++.+++..+|.. + .++++ +. ..|.|.++.+. ++|++.|||++|++.+.+
T Consensus 107 ~yl~~a~~la~~l~~~~r~-----~--~G~fw~~~~~~~-~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~ 170 (373)
T 1nc5_A 107 RYVKAAKRLRSLYGTLNRT-----S--EGGFWHKDGYPY-QMWLDGLYMGGPFALKYANLKQETELFDQVVL 170 (373)
T ss_dssp HHHHHHHHHHGGGGTSCBC-----T--TSCBCSCTTSTT-EEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCC-----C--CCCeeccCCCCC-eEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4677788888777665521 0 11222 22 34678877665 688899999999999876
No 20
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=91.53 E-value=0.62 Score=46.25 Aligned_cols=129 Identities=18% Similarity=0.089 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhccccc
Q 015354 112 LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFR 191 (408)
Q Consensus 112 ~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk 191 (408)
-+..++.+.=.+++|+.-.++ .+++....+.. +.|+. .. ...|+ +.....+|+-|++++.
T Consensus 106 ~~~~~~~~~~aA~~L~~r~~~-~~g~i~sw~~~-------~~~~~---~~-~~iID--------~mmni~~L~~A~~~~g 165 (377)
T 2ahf_A 106 DESARKLALDAADVLMRRWRA-DAGIIQAWGPK-------GDPEN---GG-RIIID--------CLLNLPLLLWAGEQTG 165 (377)
T ss_dssp CHHHHHHHHHHHHHHHTTEET-TTTEECCBSST-------TCTTT---TT-EEEGG--------GGGGHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHhCCC-CCCeEEeccCC-------CCCCC---Cc-eEEec--------hHHHHHHHHHHHHHhC
Confidence 357788888888998877665 43332222210 11221 11 23343 1344789999999986
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCC-CCCC--CCCCcccc--cCCCCccchH---------HHHHHHHHHHHcCChhH
Q 015354 192 KGDPRYASLLLRTAKNVLQFAMQYRGA-YSDS--LGSAVCPF--YCSYSGYKDE---------LLWGAAWLFRATNDVTY 257 (408)
Q Consensus 192 ~~D~~~A~~~l~~A~~~~~~a~~~p~~-~~~~--~~~~~~~~--Y~s~~~~~De---------~~wAA~~Ly~aTgd~~Y 257 (408)
||.|.+...+||...-+......+. ++.. .+..+... ..- .++.|+ +++|.++||++|+++.|
T Consensus 166 --d~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~-qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~y 242 (377)
T 2ahf_A 166 --DPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTH-QGNTDGSTWTRGQAWGIYGFALNSRYLGNADL 242 (377)
T ss_dssp --CTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECS-SSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred --CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCc-CCcCCcchhHHHHHHHHHHHHHHHHHHCChHH
Confidence 6777776666666665554221121 1110 01001110 011 344555 57788999999999999
Q ss_pred HHHHHH
Q 015354 258 YNFIKS 263 (408)
Q Consensus 258 l~~a~~ 263 (408)
|+.|++
T Consensus 243 L~~A~~ 248 (377)
T 2ahf_A 243 LETAKR 248 (377)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999987
No 21
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.45 E-value=3.6 Score=41.64 Aligned_cols=259 Identities=13% Similarity=0.075 Sum_probs=127.5
Q ss_pred cCCCcccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHh-------hccCCCCceEEeeCCCCCCCCCCC
Q 015354 80 AGDNVKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLK-------CATATPGKLYVGVGDPNADHKCWE 152 (408)
Q Consensus 80 AGD~~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk-------~~~~~~g~~y~qvg~~~~dh~~w~ 152 (408)
-|++.+-.-+.+..+.-|+-+++..++ +..++-++=-+|++++ ..+. +|.+.+++-+...++
T Consensus 74 ~~~~~~~~y~~Gv~l~gl~~ay~~Tgd------~kY~~ya~~~~dfi~~~~p~~~~~~~~-~G~l~~~~r~~~~~~---- 142 (445)
T 3k11_A 74 RGAFRLASYEWGVTYSALIAAAETTGD------KRYTDYVQNRFRFLAEVAPHFKRVYEE-KGKTDSQLLQILTPH---- 142 (445)
T ss_dssp CCSSCTTSHHHHHHHHHHHHHHHHHCC------HHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCCCHHHHHHHSCC----
T ss_pred cCCcccCccCHHHHHHHHHHHHHHHCC------HHHHHHHHHHHHHHHhccchhhhhhhc-cCCeecccccccCCC----
Confidence 367777667778888888777777643 3344444434444333 2233 454433221100010
Q ss_pred CCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCCccccc
Q 015354 153 RPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY-RGAYSDSLGSAVCPFY 231 (408)
Q Consensus 153 ~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~-p~~~~~~~~~~~~~~Y 231 (408)
.-|-.|-++.+|--+++. ..|+ ++++.|+++.+++.+. |.. .+..- .-...|
T Consensus 143 -------------------~LDD~g~~~~~Li~lY~~--T~d~----~yl~~a~~~ad~L~~~~pRt-~~Ggf-~h~~~~ 195 (445)
T 3k11_A 143 -------------------ALDDAGAVCTAMIKLRLK--DESL----PVDGLIQNYFDFIINKEYRL-ADGTF-ARNRPQ 195 (445)
T ss_dssp -------------------SGGGTHHHHHHHHHHHHH--CTTC----CCHHHHHHHHHHHHHTSCBC-TTCCB-CBCSSS
T ss_pred -------------------cchhHHHHHHHHHHHHHh--cCCH----HHHHHHHHHHHHHHHcCCCC-CCCce-eecCCC
Confidence 112234445555555543 2344 5566666666776654 211 00000 001123
Q ss_pred CCCCccchHHHHHH---HHHHHHcCChh--HHHHHHH---------c-CCC-----------CCCccccccchhHHH---
Q 015354 232 CSYSGYKDELLWGA---AWLFRATNDVT--YYNFIKS---------V-GDD-----------GGTDVFSWDNKFAGA--- 282 (408)
Q Consensus 232 ~s~~~~~De~~wAA---~~Ly~aTgd~~--Yl~~a~~---------~-~~~-----------~~~~~~~Wd~~~~~~--- 282 (408)
+. .-|.|-++-+. +++.+.||+++ |++.+.. + ... .......|..-.+-+
T Consensus 196 ~~-q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~g 274 (445)
T 3k11_A 196 RN-TLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESSTDHPAFCWARANGWALLT 274 (445)
T ss_dssp TT-EEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHH
T ss_pred CC-ceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHHhcccCCCCCEeeeecCCCCCCCcceecccchHHHHH
Confidence 32 34677765544 67778899999 9998876 1 110 012233565433211
Q ss_pred HHHHhhhcc---cccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceec---CCCCchHHHHHHHHHHHHHHHHHHh
Q 015354 283 HVLLARGAL---LNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYK---MPESNLQYVTSISFLLTTYAKYMRA 356 (408)
Q Consensus 283 ~~lla~~~~---~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~---~~WGs~~~~~n~a~l~~~~~~~~~~ 356 (408)
.+.+.+... +..+..++.+++.++.++ ...+ +.|+ |- +.-++-+-++..|+++....+.+.
T Consensus 275 l~~~l~~lp~~~~~r~~l~~~~~~~a~~l~-~~Q~----------~~G~-W~~vld~~~~y~EsSaTAmfaygllkgvr- 341 (445)
T 3k11_A 275 ACELLDVLPEDYPQRPKVMDYFRAHVRGVT-ALQS----------GEGF-WHQLLDCNDSYLETSATAIYVYCLAHAIN- 341 (445)
T ss_dssp HHHHHHHSCTTCTTHHHHHHHHHHHHHHHH-TTCC----------TTSC-EESBTTCTTSCEEHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHhcccccccHHHHHHHHHHHHHHHH-HhCC----------CCCc-hhhccCCCCCCCCccHHHHHHHHHHHHHH-
Confidence 122212111 112334556666666554 2222 2443 31 223444445555554433333321
Q ss_pred cccccccCCcccChhhhHHHHHhccccccC-CCCCC-----CeeeeeC
Q 015354 357 TKHYFTCGNMVVNPGLLTRPRKKTGGLYIR-CEPNK-----NVIHGWF 398 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~y~~~a~~qidYiLG-~NP~~-----SfVtG~G 398 (408)
.++ ...++|...|.+.++.|+. .|+.| |.|||.|
T Consensus 342 --~G~------Ld~~~Y~~~A~ka~~~L~~~i~~dG~l~~v~~gtg~g 381 (445)
T 3k11_A 342 --KGW------IDAIAYGPVAQLGWHAVAGKINEEGQVEGTCVGTGMA 381 (445)
T ss_dssp --HTS------SCHHHHHHHHHHHHHHHHTTBCTTSCBCSCBCCCCCC
T ss_pred --cCC------CCHHHHHHHHHHHHHHHHHhCCCCCCEeceeeccCCC
Confidence 111 2456899999999999987 35533 6778887
No 22
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=91.37 E-value=3.2 Score=41.04 Aligned_cols=176 Identities=14% Similarity=0.066 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCc---ccccCCCCccchH-HHHHHHHHHHHcCChhHHHHHHHc----
Q 015354 193 GDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAV---CPFYCSYSGYKDE-LLWGAAWLFRATNDVTYYNFIKSV---- 264 (408)
Q Consensus 193 ~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~---~~~Y~s~~~~~De-~~wAA~~Ly~aTgd~~Yl~~a~~~---- 264 (408)
.+.+--.+.++.+++-..-++...+.+....++.. ..-..+ -+|..- +.-+...+|+.|||++|++.+++.
T Consensus 22 ~~~~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~k~~~~-W~Wt~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~ 100 (382)
T 3pmm_A 22 IARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAG-WEWTHGVGLYGIYQYYQQTGDIEMRDIIDRWFADR 100 (382)
T ss_dssp SCHHHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECSSSTTS-CSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCccccccccCCccccccCCCCcC-ccccHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 45555666777766665333221122321112101 122333 233333 445667789999999999999872
Q ss_pred -CCCCCCccccccchhHH-HHHHHhhhcccccchhhHHHHHHHHHHHHHhCCCCCCCcccccCCCceecC---------C
Q 015354 265 -GDDGGTDVFSWDNKFAG-AHVLLARGALLNRDKNFEPYRQEAEDFICRILPNSPFTTTQYTQGGLMYKM---------P 333 (408)
Q Consensus 265 -~~~~~~~~~~Wd~~~~~-~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~Gl~~~~---------~ 333 (408)
... ....+-|+...+ +.+.+.+. +++++.++..+..++..+.. .++++.|-+|-. -
T Consensus 101 ~~~~--~~~~n~D~~~~~~~l~~lY~~--Tgd~~Yl~~a~~~ad~L~~~---------~~r~~~Ggf~~~~~~~~~~~~~ 167 (382)
T 3pmm_A 101 FAEG--ATTKNVNTMAPFLTLAYRFEE--TGRMAYLPWLESWAEWAMHE---------MPRTEQGGMQHMTLAEENHQQM 167 (382)
T ss_dssp HHHC--CCCCCTTTTTTHHHHHHHHHH--HCCGGGHHHHHHHHHHHHHT---------SCBCGGGCBCCCCSSCCCTTEE
T ss_pred HcCC--CCcCcccchHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHhh---------CCCCcCCCeeeecCCCCCCCcE
Confidence 111 111233443332 22333333 34444444444444433221 122323322211 1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhcccccccCCcccChhhhHHHHHhccccccC--CCCCC-CeeeeeC
Q 015354 334 ESNLQYVTSISFLLTTYAKYMRATKHYFTCGNMVVNPGLLTRPRKKTGGLYIR--CEPNK-NVIHGWF 398 (408)
Q Consensus 334 WGs~~~~~n~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG--~NP~~-SfVtG~G 398 (408)
|-. ...++.-|++. ++++ +++++|.+.|.+|++...- .+|-. .|..|+-
T Consensus 168 WiD-gl~M~~p~La~-~~~~--------------tgd~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~ 219 (382)
T 3pmm_A 168 WDD-TLMMTVLPLAK-IGKL--------------LNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWN 219 (382)
T ss_dssp ETT-HHHHTHHHHHH-HHHH--------------TTCHHHHHHHHHHHHHHHHHHBCTTTSCBCSEEE
T ss_pred Eec-chhhhHHHHHH-HHHH--------------HCCHHHHHHHHHHHHHHHHHccCCCCCCeeeecc
Confidence 211 11234344443 3444 5788999999999887765 36654 8888873
No 23
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.62 E-value=3.3 Score=41.94 Aligned_cols=135 Identities=14% Similarity=0.025 Sum_probs=86.6
Q ss_pred chhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCC
Q 015354 89 PMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSA 168 (408)
Q Consensus 89 ~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~ 168 (408)
-+++.+.-|+-.+...|+.. .+.+.+++.+|=-++.|++.|++ +| ++++|=|. |+. |
T Consensus 267 GnGW~~~gl~~~l~~lp~~~-~~r~~l~~~~~~~a~~l~~~Q~~-~G-~W~~vld~---------~~~-------y---- 323 (445)
T 3k11_A 267 ANGWALLTACELLDVLPEDY-PQRPKVMDYFRAHVRGVTALQSG-EG-FWHQLLDC---------NDS-------Y---- 323 (445)
T ss_dssp HHHHHHHHHHHHHHHSCTTC-TTHHHHHHHHHHHHHHHHTTCCT-TS-CEESBTTC---------TTS-------C----
T ss_pred cchHHHHHHHHHHHhccccc-ccHHHHHHHHHHHHHHHHHhCCC-CC-chhhccCC---------CCC-------C----
Confidence 35666666666666666543 35788999999999999999987 77 77787541 211 1
Q ss_pred CCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcC---CCCCCCCCCCccc------ccCCCCc-c-
Q 015354 169 SNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYR---GAYSDSLGSAVCP------FYCSYSG-Y- 237 (408)
Q Consensus 169 ~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p---~~~~~~~~~~~~~------~Y~s~~~-~- 237 (408)
+-|++++.+|.+|+-+.+. .-.| +++++..|+++|+-+..+- |.... +. .+++ +|.+... .
T Consensus 324 --~EsSaTAmfaygllkgvr~-G~Ld---~~~Y~~~A~ka~~~L~~~i~~dG~l~~-v~-~gtg~g~d~~~Y~~~p~~~~ 395 (445)
T 3k11_A 324 --LETSATAIYVYCLAHAINK-GWID---AIAYGPVAQLGWHAVAGKINEEGQVEG-TC-VGTGMAFDPAFYYYRPVNVY 395 (445)
T ss_dssp --EEHHHHHHHHHHHHHHHHH-TSSC---HHHHHHHHHHHHHHHHTTBCTTSCBCS-CB-CCCCCCSSHHHHHTCCBCTT
T ss_pred --CCccHHHHHHHHHHHHHHc-CCCC---HHHHHHHHHHHHHHHHHhCCCCCCEec-ee-eccCCCCCchhhccCcccCC
Confidence 2367889999999998875 2234 3578999999999988652 11111 00 0111 2322111 1
Q ss_pred ----chHHHHHHHHHHHHcCC
Q 015354 238 ----KDELLWGAAWLFRATND 254 (408)
Q Consensus 238 ----~De~~wAA~~Ly~aTgd 254 (408)
.--++||++|+.+..+.
T Consensus 396 d~~G~G~fllA~~E~~~l~~~ 416 (445)
T 3k11_A 396 AAHGYGPVLWAGAEMIRLLNT 416 (445)
T ss_dssp CGGGHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHhcc
Confidence 12489999999998653
No 24
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=89.57 E-value=3.4 Score=40.46 Aligned_cols=69 Identities=16% Similarity=0.097 Sum_probs=44.0
Q ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchH--HHHHHHHHHHHcCC
Q 015354 177 GETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDE--LLWGAAWLFRATND 254 (408)
Q Consensus 177 ~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De--~~wAA~~Ly~aTgd 254 (408)
|-+..+|+.++++.+ |+. +++.|++..++.....+. .. |.. .. .|+ +.++.++||+.||+
T Consensus 44 G~~~~gl~~~y~~tg--d~~----y~~~a~~~~~~~~~~~g~--------l~--~~~-~~-lDd~~~g~~ll~lY~~Tgd 105 (373)
T 1nc5_A 44 GVFLCGVLRLWEATG--EKR----YFEYAKAYADLLIDDNGN--------LL--FRR-DE-LDAIQAGLILFPLYEQTKD 105 (373)
T ss_dssp HHHHHHHHHHHHHHC--CHH----HHHHHHHHHHHHBCTTCC--------BC--CCT-TC-GGGTGGGGGHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhC--CHH----HHHHHHHHHHHHhCCCCc--------cc--CCC-CC-cchHHHHHHHHHHHHHhCC
Confidence 566778999999986 554 455555555554321111 01 221 11 222 56789999999999
Q ss_pred hhHHHHHHH
Q 015354 255 VTYYNFIKS 263 (408)
Q Consensus 255 ~~Yl~~a~~ 263 (408)
++|++.+..
T Consensus 106 ~~yl~~a~~ 114 (373)
T 1nc5_A 106 ERYVKAAKR 114 (373)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999887
No 25
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=87.65 E-value=1.1 Score=44.13 Aligned_cols=86 Identities=13% Similarity=0.022 Sum_probs=51.6
Q ss_pred CccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH-HHc------CCCCCCCCCC-CcccccCCCC-c-c-c
Q 015354 170 NPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFA-MQY------RGAYSDSLGS-AVCPFYCSYS-G-Y-K 238 (408)
Q Consensus 170 ~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a-~~~------p~~~~~~~~~-~~~~~Y~s~~-~-~-~ 238 (408)
+||-+ .+.+-.|+.+++++. |+ ++++.|+++++|+ .++ .+.+.....+ ....++.+.. . | .
T Consensus 245 ~pgh~--ie~~wlL~~a~~~~~--~~----~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~q 316 (402)
T 1fp3_A 245 NPGHA--LEAGWFLLRHSSRSG--DA----KLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPH 316 (402)
T ss_dssp CHHHH--HHHHHHHHHHHHHTT--CH----HHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHH
T ss_pred CCCcH--HHHHHHHHHHHHHcC--Ch----HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHH
Confidence 35644 355567899999985 55 4566777777777 543 2222210010 0011111100 0 0 2
Q ss_pred hHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 239 DELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 239 De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
-|.+.|++.||++|||+.|++.+++
T Consensus 317 aea~~a~l~ly~~tgd~~yl~~a~~ 341 (402)
T 1fp3_A 317 SEAMIAFLMGYSESGDPALLRLFYQ 341 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3789999999999999999998876
No 26
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=86.65 E-value=1.3 Score=44.18 Aligned_cols=145 Identities=11% Similarity=0.010 Sum_probs=83.4
Q ss_pred cccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhc-cCCCCceEEeeCCCCCCCCCCCCCCCCCCccc
Q 015354 84 VKFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCA-TATPGKLYVGVGDPNADHKCWERPEDMDTVRS 162 (408)
Q Consensus 84 ~Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~-~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~ 162 (408)
-|...-.+--+..++.++. + +.|+.++.++-+++||++-. +...|++|+.|.. .|.+|. + ..
T Consensus 47 ~k~~~~nar~i~~~a~a~~-~------g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~------dg~~~~--~--k~ 109 (421)
T 2zbl_A 47 GTHLWITARMLHVYSVAAS-M------GRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND------QGVVDA--S--KQ 109 (421)
T ss_dssp CEEHHHHHHHHHHHHHHHH-T------TCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET------TEEEEC--C--EE
T ss_pred hhhHHHHHHHHHHHHHHHH-c------CChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC------CCCcCC--c--hh
Confidence 4777766666666666653 3 34678999999999998763 4313788877631 123332 1 11
Q ss_pred eEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc---C--CCCCCCCCCCcccccCCCCcc
Q 015354 163 VYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY---R--GAYSDSLGSAVCPFYCSYSGY 237 (408)
Q Consensus 163 ~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~---p--~~~~~~~~~~~~~~Y~s~~~~ 237 (408)
+| +- +.++.+++. +++.. ++ +.++.|+++.++.+++ | |.|....+....+.-.. ..+
T Consensus 110 ly---------d~-Af~i~al~~-~~~tg--~~----~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~-~~~ 171 (421)
T 2zbl_A 110 GY---------QH-FFALLGAAS-AVTTG--HP----EARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDY-RGG 171 (421)
T ss_dssp HH---------HH-HHHHHHHHH-HHTTT--CT----THHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSC-EEH
T ss_pred HH---------HH-HHHHHHHHH-HHHhC--Cc----cHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCccccc-CCC
Confidence 11 22 455556666 55543 34 4567777788888764 2 22221110000010000 123
Q ss_pred chH--HHHHHHHHHHHcCChhHHHHHHH
Q 015354 238 KDE--LLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 238 ~De--~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
+.. ++-|.+.|+++||++.|++.+++
T Consensus 172 n~~m~~~~al~~l~~~tgd~~~~~~A~~ 199 (421)
T 2zbl_A 172 NANMHAVEAFLIVYDVTHDKKWLDRALR 199 (421)
T ss_dssp HHHHHHHHHHHHHHHTTCCTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 343 37788899999999999987776
No 27
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=80.76 E-value=10 Score=37.37 Aligned_cols=154 Identities=13% Similarity=0.021 Sum_probs=84.4
Q ss_pred ccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeC----CCCCCCCCCCCCCCCCCc
Q 015354 85 KFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVG----DPNADHKCWERPEDMDTV 160 (408)
Q Consensus 85 Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg----~~~~dh~~w~~Pe~~~~~ 160 (408)
....-.-.-+..|+|++..+ +-|+.+++++--++++++-+...+|.++|.+- ++..-|. |..+--.++.
T Consensus 145 ~~iID~mmni~~L~~A~~~~------gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~-~t~qG~~dds 217 (377)
T 2ahf_A 145 RIIIDCLLNLPLLLWAGEQT------GDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRG-GTHQGNTDGS 217 (377)
T ss_dssp EEEGGGGGGHHHHHHHHHHH------CCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEE-ECSSSSSTTS
T ss_pred eEEechHHHHHHHHHHHHHh------CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeC-CCcCCcCCcc
Confidence 34443333378899998877 35779999999999999987654788888875 2211000 0111000000
Q ss_pred cceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc-CC--C-CCCC-CCCCcccccCCCC
Q 015354 161 RSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY-RG--A-YSDS-LGSAVCPFYCSYS 235 (408)
Q Consensus 161 R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~-p~--~-~~~~-~~~~~~~~Y~s~~ 235 (408)
.+. ---|-++-+++..++.-+ | .++|+.|+++-++..++ |. . |.+. .+. ....+.+ +
T Consensus 218 ~Wa----------RGqAw~i~gl~~ly~~T~--d----~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~-~~~~~~d-~ 279 (377)
T 2ahf_A 218 TWT----------RGQAWGIYGFALNSRYLG--N----ADLLETAKRMARHFLARVPEDGVVYWDFEVPQ-EPSSYRD-S 279 (377)
T ss_dssp CBH----------HHHHHHHHHHHHHHHHHT--C----HHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCC-CTTSCBC-H
T ss_pred hhH----------HHHHHHHHHHHHHHHHHC--C----hHHHHHHHHHHHHHHHhhHHhCCcccccCCCc-cCCCccC-C
Confidence 000 111334555666666643 3 45688888888888776 32 1 3221 111 1111111 1
Q ss_pred ccchHHHHHHHHHHHHcC-----ChhHHHHHHH
Q 015354 236 GYKDELLWGAAWLFRATN-----DVTYYNFIKS 263 (408)
Q Consensus 236 ~~~De~~wAA~~Ly~aTg-----d~~Yl~~a~~ 263 (408)
+-.--.+.+-++|.+.|+ ++.|++.+++
T Consensus 280 Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~ 312 (377)
T 2ahf_A 280 SASAITACGLLEIASQLDESDPERQRFIDAAKT 312 (377)
T ss_dssp HHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCccccchHHHHHHHHH
Confidence 111234566678888886 5678887765
No 28
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=77.54 E-value=80 Score=33.76 Aligned_cols=164 Identities=15% Similarity=0.087 Sum_probs=75.3
Q ss_pred hhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecc-CCCcccc--cchhHHHHHHHHHHHHc
Q 015354 28 PNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDA-GDNVKFN--FPMAFTTTMLSWSTLEY 104 (408)
Q Consensus 28 ~~Y~~~l~~sl~fy~~QR~G~l~~~~~~~Wrg~s~l~Dg~~~~~dl~GGW~DA-GD~~Ky~--~~~a~s~~~L~~~~~ef 104 (408)
..+.+.+++++.|...+..-..+.+.....|+. + .|||-=. .|.+ +. -.+|+++..|.... ..
T Consensus 405 ~~~~~~l~ka~~~L~~~Q~~~~~~d~~~~~r~~-----------~-~GGW~f~~~~~~-~pd~d~TA~vl~aL~~~~-~~ 470 (732)
T 1w6k_A 405 PEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQM-----------R-KGGFSFSTLDCG-WIVSDCTAEALKAVLLLQ-EK 470 (732)
T ss_dssp GGGHHHHHHHHHHHHHHSCCCCCTTGGGGTCCC-----------C-TTCCBSSCTTTC-CBCHHHHHHHHHHHHHHH-HH
T ss_pred hhhHHHHHHHHHHHHHhcccccCCcccccccCC-----------C-CCeecCCCCCCC-CCccccHHHHHHHHHHHh-cc
Confidence 358899999999986554322222111112211 1 4777321 1211 11 12344444443221 12
Q ss_pred ccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHH
Q 015354 105 GKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALA 184 (408)
Q Consensus 105 ~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA 184 (408)
...+++ +...+.++=+++||+++|.+ ||++-.--.+.......+.+|.+.-. +. .+ +.+..+.|+.+..+|+
T Consensus 471 ~~~~g~--~~~~~~i~~av~wLls~Q~~-DGgw~a~~~~~~~~~l~~i~~~e~fg-~~--~~--d~s~v~~Ta~vL~aL~ 542 (732)
T 1w6k_A 471 CPHVTE--HIPRERLCDAVAVLLNMRNP-DGGFATYETKRGGHLLELLNPSEVFG-DI--MI--DYTYVECTSAVMQALK 542 (732)
T ss_dssp CTTCCS--CCCHHHHHHHHHHHHTTCCT-TSCBCSSSCCCSCGGGGGGCCCSSCS-SC--SS--CCCBHHHHHHHHHHHH
T ss_pred cccccc--hhhHHHHHHHHHHHHHhcCC-CCCEEeecCCCchHHHhhCcchhccc-cc--cc--CCCcchHHHHHHHHHH
Confidence 111211 11234567789999999999 98762111110000001123322110 11 11 1234567777777777
Q ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHHcC
Q 015354 185 AASLVFRKGDPRYASLLLRTAKNVLQFAMQYR 216 (408)
Q Consensus 185 ~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p 216 (408)
.....+..... .+.....+++-+|+.++.
T Consensus 543 ~~~~~~~~~~~---~~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 543 YFHKRFPEHRA---AEIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp HHHHHCTTSSH---HHHHHHHHHHHHHHHHHS
T ss_pred Hhccccccccc---hhhHHHHHHHHHHHHhhc
Confidence 76655433221 122334456667887764
No 29
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=77.19 E-value=10 Score=37.31 Aligned_cols=112 Identities=13% Similarity=0.073 Sum_probs=72.9
Q ss_pred ccceeccCCCcccc--------cchhHHHHHHHHHHHH--cccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeCC
Q 015354 74 TGGYYDAGDNVKFN--------FPMAFTTTMLSWSTLE--YGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVGD 143 (408)
Q Consensus 74 ~GGW~DAGD~~Ky~--------~~~a~s~~~L~~~~~e--f~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~ 143 (408)
+|=||.+-|+.+.. --+++.+.-|+..+.. .|.. ..+.+.+++.+|=-++.|++.|++ +| ++++|=+
T Consensus 211 tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~-~~~~~~~~~~~~~~a~~~~~~q~~-~G-~W~~~~d 287 (382)
T 3pmm_A 211 TGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEG-NAVRRYLITVLDAQIAALAECQDD-SG-LWHTLLD 287 (382)
T ss_dssp TSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTT-CHHHHHHHHHHHHHHHHHHHHCCT-TS-CEESBTT
T ss_pred CCCeeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcc-hhhHHHHHHHHHHHHHHHHHcCCC-CC-ChhhccC
Confidence 45555554444431 1345555555444443 3322 235778999999999999999997 77 6777744
Q ss_pred CCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc
Q 015354 144 PNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY 215 (408)
Q Consensus 144 ~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~ 215 (408)
.|+ .| +-|++++.+|.+|+-+.+. .-.+ ++++..|+++|+-..++
T Consensus 288 ---------~~~-------~y------~EsSatA~~ay~ll~~~~~-g~l~----~~Y~~~a~ka~~~l~~~ 332 (382)
T 3pmm_A 288 ---------DPH-------SY------LEASATAGFAYGILKAVRK-RYVG----QHYAGVAEKAIRGIVQN 332 (382)
T ss_dssp ---------CTT-------SC------EEHHHHHHHHHHHHHHHHT-TSSC----GGGHHHHHHHHHHHHHT
T ss_pred ---------CCC-------CC------ccccHHHHHHHHHHHHHHc-CCCc----HHHHHHHHHHHHHHHhh
Confidence 122 11 1367889999999999883 0123 36889999999999876
No 30
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=73.43 E-value=20 Score=34.72 Aligned_cols=85 Identities=14% Similarity=0.130 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhccc--
Q 015354 112 LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLV-- 189 (408)
Q Consensus 112 ~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~v-- 189 (408)
-+...+-++=|++|||.||.+ +|+. .|. | |... .-..- |+.+ =|+++.+.-.|+....-
T Consensus 92 ~~~y~~Ai~Rgl~wlL~mQ~~-nGGW-pqF-----d------pd~~-~Yl~~--IpFn---DDvtarvLelL~~~~~~~~ 152 (332)
T 1gxm_A 92 NTKYRDAVRKAANFLVNSQYS-TGAL-PQF-----Y------PLKG-GYSDH--ATFN---DNGMAYALTVLDFAANKRA 152 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHCCT-TSCC-BSE-----E------SCCS-GGGGS--EECG---GGHHHHHHHHHHHHHTTCT
T ss_pred chHHHHHHHHHHHHHHhccCC-CCCc-ccc-----C------CCcc-ccccc--CCcc---hHHHHHHHHHHHHHHhccC
Confidence 367899999999999999999 7751 111 0 1111 11111 2222 28899999998888642
Q ss_pred -cc---CCCHHHHHHHHHHHHHHHHHHHHcC
Q 015354 190 -FR---KGDPRYASLLLRTAKNVLQFAMQYR 216 (408)
Q Consensus 190 -fk---~~D~~~A~~~l~~A~~~~~~a~~~p 216 (408)
|. =.|++. .+...+.+++-+|+.+.+
T Consensus 153 ~~~~~~~~~~~~-~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 153 PFDTDVFSDNDR-TRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp TSCSTTSCHHHH-HHHHHHHHHHHHHHHHHS
T ss_pred Cccccccccchh-hhhHHHHHHHHHHHHHhh
Confidence 21 025566 778888888999988764
No 31
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=71.81 E-value=14 Score=36.53 Aligned_cols=115 Identities=15% Similarity=0.114 Sum_probs=70.3
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccc
Q 015354 111 ELQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVF 190 (408)
Q Consensus 111 ~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vf 190 (408)
+.+.+++.|+=.++|+++.+.+ +|..-..+ + ...++.+... -|+ ..++-++..++.++
T Consensus 248 ~~~~~~~~i~~~l~~l~~~~~~-~g~wp~~~------------~--~~~~~~~~wC----hG~---~Gi~~~l~~~~~~~ 305 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQLKFP-SGNYPPCI------------G--DNRDLLVHWC----HGA---PGVIYMLIQAYKVF 305 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHTCCT-TSCCCSBT------------T--CCCCCCCSSS----SSH---HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhhcc-CCCCCCCC------------C--cccCcccccc----CCc---HHHHHHHHHHHHHc
Confidence 4578899999999999998776 44211111 1 1111222211 132 34566788888888
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 191 RKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 191 k~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
. |+++.+.+.+.++..|+.. ....+ +..-.|. + -....-..||+.|+++.|++.|..
T Consensus 306 ~--~~~~~~~a~~~~~~~~~~g-----~~~~~-~~lChG~----a----G~~~~ll~~~~~t~~~~~~~~A~~ 362 (411)
T 3e6u_A 306 R--EEKYLCDAYQCADVIWQYG-----LLKKG-YGLCHGS----A----GNAYAFLTLYNLTQDMKYLYRACK 362 (411)
T ss_dssp C--CHHHHHHHHHHHHHHHHHC-----SBTTC-SCSTTSH----H----HHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHHhcC-----ccCCC-CceecCh----H----HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 5 6888888877777777642 11111 1101111 1 247778899999999999998877
No 32
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=69.38 E-value=9.3 Score=37.86 Aligned_cols=87 Identities=18% Similarity=0.131 Sum_probs=51.2
Q ss_pred CccchHHHHHHHHHHHhcccccC-CC--HHHHHHHHHHHHHHHHHHHHc-------CCCCCCCCCCCcccccCCCCccc-
Q 015354 170 NPGSDVAGETAAALAAASLVFRK-GD--PRYASLLLRTAKNVLQFAMQY-------RGAYSDSLGSAVCPFYCSYSGYK- 238 (408)
Q Consensus 170 ~pgs~~~~~~AAalA~as~vfk~-~D--~~~A~~~l~~A~~~~~~a~~~-------p~~~~~~~~~~~~~~Y~s~~~~~- 238 (408)
+||-+ .+.+=.|..++.+..+ .| | .++++.|+++++++.++ .|.+.....+ ....=.. ..+.
T Consensus 245 ~pgh~--iE~~wlLl~~~~~~~~~~~~~~---~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~-g~~~~~~-k~~w~ 317 (421)
T 2zbl_A 245 TPGAW--IEWGRLMLHLHAALEARFETPP---AWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWD-GKPIVRE-RVRWP 317 (421)
T ss_dssp CHHHH--HHHHHHHHHHHHHHHHTTCCCC---THHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTT-SCBSCCC-EEHHH
T ss_pred CCChH--HHHHHHHHHHHHHcccccccch---HHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCC-CCccCCC-cccHH
Confidence 36655 3556567777777632 12 2 15778888888887543 2332221111 1110011 2222
Q ss_pred -hHHHHHHHHHHHHcCChhHHHHHHH
Q 015354 239 -DELLWGAAWLFRATNDVTYYNFIKS 263 (408)
Q Consensus 239 -De~~wAA~~Ly~aTgd~~Yl~~a~~ 263 (408)
-|.+-|++.||+.||++.|++.+++
T Consensus 318 ~aea~~all~l~~~tgd~~yl~~a~~ 343 (421)
T 2zbl_A 318 IVEAMGTAYALYTLTDDSQYEEWYQK 343 (421)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4789999999999999999998876
No 33
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=59.87 E-value=72 Score=31.74 Aligned_cols=86 Identities=16% Similarity=0.135 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCceEEeeCCCCCCCCCCCCCCCCCCccceEEcCCCCccchHHHHHHHHHHHhccc--
Q 015354 112 LQNARAAIRWATDYLLKCATATPGKLYVGVGDPNADHKCWERPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLV-- 189 (408)
Q Consensus 112 ~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~v-- 189 (408)
-+...+-++=|++|||.||.+ +|+. .|. | |+.. ....- |+.+ =|+++.+.-.|+....-
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~~-nGGW-pqF-----d------pdn~-~y~~~--IpFn---DDvt~rvle~L~~~~~~~~ 230 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQFP-NGGW-PQV-----W------PLEG-GYHDA--ITYN---DDALVHVAELLSDIAAGRD 230 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSCT-TSCC-BSB-----S------SCCC-GGGGS--EECG---GGHHHHHHHHHHHHHHTCT
T ss_pred cHHHHHHHHHHHHHHHHccCC-CCCC-cCc-----C------cccc-ccccC--CCcC---cHHHHHHHHHHHHHHhccC
Confidence 478899999999999999999 7741 111 1 2221 11111 2222 28888888888877762
Q ss_pred -ccCCCHHHHHHHHHHHHHHHHHHHHcC
Q 015354 190 -FRKGDPRYASLLLRTAKNVLQFAMQYR 216 (408)
Q Consensus 190 -fk~~D~~~A~~~l~~A~~~~~~a~~~p 216 (408)
|.-.|+++..+...+.+++-+|+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 231 GFGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 333588999999999999999998764
No 34
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=57.15 E-value=45 Score=32.99 Aligned_cols=152 Identities=7% Similarity=-0.061 Sum_probs=80.7
Q ss_pred cchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCCceEEeeC----CCCCCCCCCCCCCCCCCccce
Q 015354 88 FPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPGKLYVGVG----DPNADHKCWERPEDMDTVRSV 163 (408)
Q Consensus 88 ~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g~~y~qvg----~~~~dh~~w~~Pe~~~~~R~~ 163 (408)
.-....+..|+|+...+ +-|+.+++++=-++++++-+...+|.+||.+- ++..-|. +..+--.++..|.
T Consensus 173 ID~~mni~~L~~A~~~~------gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~-~t~qGy~dds~Wa 245 (397)
T 2zzr_A 173 IDCLLNIQLLFFAYEQT------GDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKG-VTRQGYSDESSWA 245 (397)
T ss_dssp TTHHHHTHHHHHHHHHH------CCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEE-ECTTSSSTTSCBH
T ss_pred echHhHHHHHHHHHHHh------CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccC-CcccccCcchhhH
Confidence 33444678888888776 45789999999999999887653688888875 2111000 0001000000000
Q ss_pred EEcCCCCccchHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHc-CC--C-CCCCCCCCcccccCCCCccch
Q 015354 164 YSVSASNPGSDVAGETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQY-RG--A-YSDSLGSAVCPFYCSYSGYKD 239 (408)
Q Consensus 164 ~~~~~~~pgs~~~~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~-p~--~-~~~~~~~~~~~~Y~s~~~~~D 239 (408)
---|-++-+++..++.=+ | .++|+.|+++.++..++ |. . |.+...+.....+.+ ++-.-
T Consensus 246 ----------RGqAw~i~gl~~lY~~T~--d----~~yL~~A~~la~~~l~~~~~d~~pywdt~~~~~~~~~~D-~Sa~a 308 (397)
T 2zzr_A 246 ----------RGQAWGIYGIPLSYRKMK--D----YQQIILFKGMTNYFLNRLPEDKVSYWDLIFTDGSGQPRD-TSATA 308 (397)
T ss_dssp ----------HHHHHHHHHHHHHHHHHC--C----HHHHHHHHHHHHHHHHTCCTTSCCBSBTTCCTTSCCCBC-HHHHH
T ss_pred ----------HHHHHHHHHHHHHHHHHC--C----HHHHHHHHHHHHHHHHhhHHhCCccccCCCCCCCCCcCC-CCHHH
Confidence 011233444444444432 3 45788889988888876 32 1 322111000011111 11111
Q ss_pred HHHHHHHHHHHHcCC---hh--HHHHHHH
Q 015354 240 ELLWGAAWLFRATND---VT--YYNFIKS 263 (408)
Q Consensus 240 e~~wAA~~Ly~aTgd---~~--Yl~~a~~ 263 (408)
=.+.+-++|.+.|++ .. |++.|++
T Consensus 309 iaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~ 337 (397)
T 2zzr_A 309 TAVCGIHEMLKYLPEVDPDKETYKYAMHT 337 (397)
T ss_dssp HHHHHHHHHHTTSCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccchhhHHHHHHHHH
Confidence 234455777788886 67 8888776
No 35
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=53.55 E-value=94 Score=31.65 Aligned_cols=122 Identities=16% Similarity=0.079 Sum_probs=69.8
Q ss_pred ccccchhHHHHHHHHHHHHcccccCccHHHHHHHHHHHHHHHHhhccCCCC--ceEEe--e-------------CCCC-C
Q 015354 85 KFNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKCATATPG--KLYVG--V-------------GDPN-A 146 (408)
Q Consensus 85 Ky~~~~a~s~~~L~~~~~ef~~~~~~~~~d~Lde~kwg~d~llk~~~~~~g--~~y~q--v-------------g~~~-~ 146 (408)
||-.-..-..-.|+|.|.+......---+..++-++--+++|...|.. ++ +.|.= . |.+- .
T Consensus 176 KyElDSla~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~-~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~ 254 (489)
T 2p0v_A 176 KWEIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRK-DDAKGPYRFQRKTERALDTMTNDGWGNPVKP 254 (489)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCS-SCSSCSCCCCCCBSCGGGSCHHHHTCSCCCC
T ss_pred cchhhhhHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcc-cCCCCCceEeecCCCcccccccCCCCCccCC
Confidence 454432222334556665543222111225677888899999998877 54 33321 1 1110 1
Q ss_pred CCCCCC--CCCCCCCccceEEcCCCCccchHHHHHHHHHHHhcccccCC--CHHHHHHHHHHHHHHHHHHHHc
Q 015354 147 DHKCWE--RPEDMDTVRSVYSVSASNPGSDVAGETAAALAAASLVFRKG--DPRYASLLLRTAKNVLQFAMQY 215 (408)
Q Consensus 147 dh~~w~--~Pe~~~~~R~~~~~~~~~pgs~~~~~~AAalA~as~vfk~~--D~~~A~~~l~~A~~~~~~a~~~ 215 (408)
-+..|+ +|+++. .|.-|-| | |+ +.+.++|-.++.+.+.. |+++|++|.+.|.++-+-..++
T Consensus 255 tGLi~S~fRPSDDa-~~yg~~i----p-SN--~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 255 VGLIASAFRPSDDA-TTFQFLV----P-SN--FFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp SSCCCCSBCTTSCB-CSSSEEH----H-HH--HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeCCCCCCCcc-hhcCcch----H-HH--HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 122344 355554 3343443 2 23 46678888888776643 7889999999999988877664
No 36
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=43.36 E-value=28 Score=35.32 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHcC--------------CCCCCccccccchhHHHHHHH
Q 015354 241 LLWGAAWLFRATNDVTYYNFIKSVG--------------DDGGTDVFSWDNKFAGAHVLL 286 (408)
Q Consensus 241 ~~wAA~~Ly~aTgd~~Yl~~a~~~~--------------~~~~~~~~~Wd~~~~~~~~ll 286 (408)
++.|.+|||++|++..|++.|...+ .....-...-|+..+.+.+.|
T Consensus 431 lL~allEL~~atq~~~~l~lA~~~g~nl~~~~~~~G~Fv~s~~h~y~r~Dd~~PlALL~L 490 (543)
T 2v8i_A 431 ALFALLDLYHASQVADYRKLAEKIGDNIIKIRYIDGFFMASSDRQYADVDAIEPYALLAL 490 (543)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECSSTTBSCEETTCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcCceecCChhhhccccCCchhHHHHHH
Confidence 6889999999999999999987621 112222335677777776644
No 37
>2kmg_A KLCA; ARDB, spectroscopy, anti-restriction, plasmid, gene regulation; NMR {Bordetella pertussis}
Probab=41.64 E-value=17 Score=30.83 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=53.0
Q ss_pred HHHHhhccCCCCce--EEeeCCCCCCCCCCCCCCCCCCccceEEcCCC----CccchHHHHHHHHHHHhcccccCCCHHH
Q 015354 124 DYLLKCATATPGKL--YVGVGDPNADHKCWERPEDMDTVRSVYSVSAS----NPGSDVAGETAAALAAASLVFRKGDPRY 197 (408)
Q Consensus 124 d~llk~~~~~~g~~--y~qvg~~~~dh~~w~~Pe~~~~~R~~~~~~~~----~pgs~~~~~~AAalA~as~vfk~~D~~~ 197 (408)
.|+-|+-++.+|++ |.++.++ ..+..|+.. .|....++.+ .-+.+++|-++..++...+.++..+..-
T Consensus 40 ~~~~rl~~dY~GG~W~f~~lsnG----g~ym~P~~~--~~~~l~~~~N~f~~evSAdAaGIi~tL~~ls~~a~~~~~~~~ 113 (142)
T 2kmg_A 40 AWMRRLCERYNGAYWHYYALSDG----GFYMAPDLA--GRLEIEVNGNGFRGELSADAAGIVATLFALGQLAAEIADTDA 113 (142)
T ss_dssp HHHHHHCTTCCCCCCEEEEETTS----CEEEECCCC--SCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHTCSCTT
T ss_pred HHHHHhCccCCCCeeEEEEecCC----eeEecCCCC--CcEEEEecCCCCCceECHHHHHHHHHHHHHHHHHHhcccccc
Confidence 46667766667876 5577664 234557652 3443322211 1245888888888888888777653212
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q 015354 198 ASLLLRTAKNVLQFAMQYRG 217 (408)
Q Consensus 198 A~~~l~~A~~~~~~a~~~p~ 217 (408)
.+.+.++=-+|.+|+.+||.
T Consensus 114 ~d~l~~~y~~Lrdya~~HpE 133 (142)
T 2kmg_A 114 ADALIDRYHFLRGFAAGHPE 133 (142)
T ss_dssp TTTTHHHHHHHHHHGGGSTT
T ss_pred cHHHHHHHHHHHHHHHhCcc
Confidence 22333344789999999985
No 38
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=32.22 E-value=1.4e+02 Score=28.90 Aligned_cols=71 Identities=11% Similarity=0.069 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcccccCCCCccchHHHHHHHHHHHHcCChh
Q 015354 177 GETAAALAAASLVFRKGDPRYASLLLRTAKNVLQFAMQYRGAYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVT 256 (408)
Q Consensus 177 ~~~AAalA~as~vfk~~D~~~A~~~l~~A~~~~~~a~~~p~~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTgd~~ 256 (408)
..++-++..+++++. |+.|.+.+.+.++..++. +....+ +..-.|. . -.+.....|++.|+++.
T Consensus 282 ~Gi~~~l~~~~~~~~--d~~~~~~a~~~~~~~~~~-----~~~~~~-~~LCHG~----a----G~~~~l~~l~~~~~~~~ 345 (409)
T 2g0d_A 282 PGISLLYLYGGLALD--NDYFVDKAEKILESAMQR-----KLGIDS-YMICHGY----S----GLIEICSLFKRLLNTKK 345 (409)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH-----CTTCCS-CCTTTSH----H----HHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHh-----ccCCCC-CCCCChH----H----HHHHHHHHHHHHhCCHH
Confidence 356777888888875 787766666666666653 111111 1101111 1 24777889999999999
Q ss_pred HHHHHHH
Q 015354 257 YYNFIKS 263 (408)
Q Consensus 257 Yl~~a~~ 263 (408)
|++.+..
T Consensus 346 ~~~~a~~ 352 (409)
T 2g0d_A 346 FDSYMEE 352 (409)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9988775
No 39
>2wj9_A ARDB, intergenic-region protein; antirestriction, hydrolase inhibitor; 1.62A {Escherichia coli}
Probab=29.25 E-value=78 Score=27.86 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=46.4
Q ss_pred HHHHHhhccCCCCce--EEeeCCCCCCCCCCCCCCC--CCCccceEEcCCC----CccchHHHHHHHHHHHhcccccCCC
Q 015354 123 TDYLLKCATATPGKL--YVGVGDPNADHKCWERPED--MDTVRSVYSVSAS----NPGSDVAGETAAALAAASLVFRKGD 194 (408)
Q Consensus 123 ~d~llk~~~~~~g~~--y~qvg~~~~dh~~w~~Pe~--~~~~R~~~~~~~~----~pgs~~~~~~AAalA~as~vfk~~D 194 (408)
-.|+-|+-++.+|++ |.++.++ ..+..|+. +...|+......+ .-+.+++|-++..+|.....++...
T Consensus 78 y~~m~rlc~dY~GG~WeF~~LSNG----G~ymaP~~~~~~~e~~~l~n~~Ngf~~evSAdAAGIiaTL~alshla~~~e~ 153 (181)
T 2wj9_A 78 FGWMDRLCENYCGGIWNLYTLNNG----GAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTEC 153 (181)
T ss_dssp HHHHHHHC---C--CEEEEEETTS----CEEEEEC------CCEEEEETTTTEEEEECHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhccccCCCeeEEEEecCC----eeEEecCCCCCCCceEEEEecCCCCCceECHHHHHHHHHHHHHHHHHcccch
Confidence 456667766658886 4467664 23455653 2234554433222 1235777777777777766665433
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Q 015354 195 PRYASLLLRTAKNVLQFAMQYRG 217 (408)
Q Consensus 195 ~~~A~~~l~~A~~~~~~a~~~p~ 217 (408)
+ .+.++--+|-+||.+||.
T Consensus 154 d----~l~e~y~~LRdYA~~HpE 172 (181)
T 2wj9_A 154 Y----AMTVHYYRLRDYALQHPE 172 (181)
T ss_dssp H----HHHHHHHHHHHHHHHSTT
T ss_pred H----HHHHHHHHHHHHHHhCcc
Confidence 3 444444578899999987
No 40
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=28.25 E-value=13 Score=31.21 Aligned_cols=20 Identities=20% Similarity=0.385 Sum_probs=13.6
Q ss_pred CCCCCC-CeeeeeCCCCCCCCC
Q 015354 386 RCEPNK-NVIHGWFWTEFPEED 406 (408)
Q Consensus 386 G~NP~~-SfVtG~G~~~~Phh~ 406 (408)
--.|.. .||-||| +||-||-
T Consensus 126 rl~p~~~r~V~GFG-~~~~~~~ 146 (148)
T 3tgv_A 126 RLQPEQGLFVKGFG-LEHHHHH 146 (148)
T ss_dssp EEEECSCCEEESCG-GGC----
T ss_pred EEEeEEEEEECccc-cceeccc
Confidence 347988 9999999 8887774
Done!