Query 015355
Match_columns 408
No_of_seqs 144 out of 760
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 11:10:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015355.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015355hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z0n_A 5'-AMP-activated protei 99.9 1.2E-22 4.1E-27 166.0 9.8 82 313-408 7-89 (96)
2 3nme_A Ptpkis1 protein, SEX4 g 99.9 1.1E-22 3.8E-27 193.0 9.2 82 316-408 169-253 (294)
3 2qlv_B Protein SIP2, protein S 99.9 2.8E-22 9.5E-27 189.5 11.0 84 315-408 2-86 (252)
4 4aee_A Alpha amylase, catalyti 99.5 1.9E-14 6.4E-19 149.4 8.4 78 315-405 16-102 (696)
5 4aef_A Neopullulanase (alpha-a 99.2 3.4E-11 1.1E-15 123.5 8.6 67 317-396 17-84 (645)
6 2z0b_A GDE5, KIAA1434, putativ 98.3 2.1E-06 7.3E-11 73.5 8.2 60 315-382 7-75 (131)
7 3c8d_A Enterochelin esterase; 98.2 3.2E-06 1.1E-10 82.0 9.1 81 314-407 28-149 (403)
8 1ac0_A Glucoamylase; hydrolase 97.8 1.1E-05 3.8E-10 66.1 3.9 75 315-397 5-93 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.5 0.0003 1E-08 72.5 9.8 68 317-396 25-100 (617)
10 3k1d_A 1,4-alpha-glucan-branch 97.3 0.00045 1.5E-08 73.6 8.2 69 316-396 135-211 (722)
11 3aml_A OS06G0726400 protein; s 97.1 0.00085 2.9E-08 71.6 7.9 65 318-395 66-144 (755)
12 2laa_A Beta/alpha-amylase; SBD 95.9 0.018 6.1E-07 48.5 7.1 67 317-396 5-79 (104)
13 1qho_A Alpha-amylase; glycosid 95.9 0.024 8.2E-07 59.0 9.3 70 316-397 581-673 (686)
14 1bf2_A Isoamylase; hydrolase, 95.8 0.0095 3.3E-07 63.1 6.0 56 318-386 17-85 (750)
15 1cyg_A Cyclodextrin glucanotra 95.8 0.033 1.1E-06 57.8 9.9 74 315-397 578-667 (680)
16 2vn4_A Glucoamylase; hydrolase 95.7 0.035 1.2E-06 58.0 9.5 73 317-397 497-583 (599)
17 3vgf_A Malto-oligosyltrehalose 95.5 0.013 4.3E-07 59.8 5.2 61 318-394 10-73 (558)
18 2wsk_A Glycogen debranching en 95.4 0.025 8.5E-07 58.9 7.1 54 318-385 20-77 (657)
19 3bmv_A Cyclomaltodextrin gluca 95.3 0.038 1.3E-06 57.4 8.1 73 316-397 583-670 (683)
20 2bhu_A Maltooligosyltrehalose 95.2 0.023 7.9E-07 58.6 6.2 62 318-396 35-97 (602)
21 2vr5_A Glycogen operon protein 95.1 0.033 1.1E-06 58.8 7.3 55 318-386 30-91 (718)
22 1d3c_A Cyclodextrin glycosyltr 95.0 0.051 1.8E-06 56.5 8.2 74 315-397 585-673 (686)
23 1vem_A Beta-amylase; beta-alph 94.4 0.088 3E-06 54.1 7.9 71 316-397 419-506 (516)
24 2e8y_A AMYX protein, pullulana 93.9 0.091 3.1E-06 55.2 7.1 66 318-396 114-186 (718)
25 1wzl_A Alpha-amylase II; pullu 93.8 0.083 2.8E-06 53.8 6.4 59 317-383 23-87 (585)
26 2fhf_A Pullulanase; multiple d 92.9 0.13 4.4E-06 57.4 6.6 67 318-396 305-385 (1083)
27 1j0h_A Neopullulanase; beta-al 92.3 0.12 4E-06 52.7 4.9 60 316-383 22-89 (588)
28 1gcy_A Glucan 1,4-alpha-maltot 91.1 0.04 1.4E-06 55.4 0.0 70 316-396 430-517 (527)
29 2wan_A Pullulanase; hydrolase, 91.0 0.31 1.1E-05 53.1 6.7 63 318-394 326-398 (921)
30 3m07_A Putative alpha amylase; 90.9 0.4 1.4E-05 49.9 7.1 62 318-396 43-107 (618)
31 4aio_A Limit dextrinase; hydro 90.8 0.27 9.3E-06 51.2 5.8 103 278-395 93-215 (884)
32 2ya0_A Putative alkaline amylo 90.7 0.38 1.3E-05 50.5 6.8 64 319-394 26-105 (714)
33 3faw_A Reticulocyte binding pr 90.5 0.22 7.6E-06 54.3 5.0 65 319-395 146-224 (877)
34 2wan_A Pullulanase; hydrolase, 87.2 0.68 2.3E-05 50.5 5.9 58 318-387 154-221 (921)
35 1ji1_A Alpha-amylase I; beta/a 85.8 0.48 1.7E-05 48.7 3.7 60 317-384 30-96 (637)
36 1ea9_C Cyclomaltodextrinase; h 85.3 0.2 6.9E-06 51.1 0.6 59 317-383 23-86 (583)
37 2ya1_A Putative alkaline amylo 83.4 1.1 3.8E-05 49.4 5.4 64 319-394 333-412 (1014)
38 4fch_A Outer membrane protein 79.7 1.2 4.3E-05 40.1 3.5 50 327-387 12-63 (221)
39 2c3v_A Alpha-amylase G-6; carb 79.2 4.4 0.00015 33.8 6.4 66 317-394 10-82 (102)
40 4fe9_A Outer membrane protein 53.1 13 0.00043 36.7 4.6 46 327-383 150-197 (470)
41 2eef_A Protein phosphatase 1, 52.4 21 0.00073 31.7 5.5 71 318-393 49-132 (156)
42 2djm_A Glucoamylase A; beta sa 47.8 29 0.001 28.9 5.4 67 318-390 22-98 (106)
43 4fe9_A Outer membrane protein 43.9 19 0.00064 35.5 4.2 53 327-390 260-319 (470)
44 2eap_A Lymphocyte cytosolic pr 39.9 18 0.00063 30.0 2.9 37 75-112 6-42 (90)
45 4dny_A Metalloprotease STCE; m 37.1 37 0.0013 29.6 4.5 25 367-392 98-123 (126)
46 4fem_A Outer membrane protein 34.9 27 0.00091 33.3 3.6 50 327-387 149-200 (358)
47 3mxz_A Tubulin-specific chaper 34.6 36 0.0012 28.9 4.0 64 251-314 33-105 (116)
48 3tnu_B Keratin, type II cytosk 34.2 62 0.0021 27.1 5.4 63 250-312 35-97 (129)
49 3tnu_A Keratin, type I cytoske 30.8 60 0.0021 27.4 4.7 63 250-312 37-99 (131)
50 3tqn_A Transcriptional regulat 30.5 44 0.0015 26.8 3.7 34 61-94 11-45 (113)
51 1mhx_A Immunoglobulin-binding 30.3 17 0.00057 28.4 1.0 14 382-395 48-61 (65)
52 4ham_A LMO2241 protein; struct 30.0 44 0.0015 27.5 3.7 31 61-91 16-47 (134)
53 2jnz_A PHL P 3 allergen; timot 27.5 1.1E+02 0.0038 25.7 5.7 57 317-389 28-90 (108)
54 1qsd_A Protein (beta-tubulin b 26.3 35 0.0012 28.5 2.5 65 249-313 27-96 (106)
55 4egu_A Histidine triad (HIT) p 26.3 42 0.0014 26.9 2.8 34 77-111 44-77 (119)
56 3qh9_A Liprin-beta-2; coiled-c 25.7 1.1E+02 0.0039 24.9 5.2 38 251-288 26-63 (81)
57 1igd_A Protein G; immunoglobul 25.6 23 0.00079 27.5 1.1 14 382-395 44-57 (61)
58 3fil_A Immunoglobulin G-bindin 24.3 17 0.00059 27.7 0.2 13 382-394 39-51 (56)
59 1x2l_A CUT-like 2, homeobox pr 23.9 68 0.0023 26.8 3.7 56 45-114 3-58 (101)
60 3neu_A LIN1836 protein; struct 22.8 71 0.0024 26.1 3.6 34 61-94 15-49 (125)
61 1h7c_A Tubulin-specific chaper 20.4 68 0.0023 26.8 3.1 65 250-314 31-102 (108)
62 2d3d_A VTS1 protein; RNA bindi 20.2 87 0.003 25.6 3.6 54 59-114 12-77 (88)
No 1
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.88 E-value=1.2e-22 Score=166.04 Aligned_cols=82 Identities=34% Similarity=0.576 Sum_probs=73.7
Q ss_pred cCCceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEeeeCCCC
Q 015355 313 LSGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQR 392 (408)
Q Consensus 313 LsgLr~VTFtW~g~AkeV~VaGSFNNW~~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~~DPd~ 392 (408)
....++|+|+|...|++|+|+|+||+|+ .++|.+. .|.|++++.|+||.|+|||+|||.|++||.+
T Consensus 7 ~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~-------------~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~ 72 (96)
T 1z0n_A 7 PAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS-------------QNNFVAILDLPEGEHQYKFFVDGQWTHDPSE 72 (96)
T ss_dssp ---CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE-------------TTEEEEEEEECSEEEEEEEEETTEEECCTTS
T ss_pred CCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC-------------CCEEEEEEEccCCCEEEEEEECCeEEcCCCC
Confidence 4456899999998899999999999999 7899862 4899999999999999999999999999999
Q ss_pred CeecC-CCccceEEEeC
Q 015355 393 ESVTK-GGICNNILRVI 408 (408)
Q Consensus 393 PtvtD-~GnvNNVLeVe 408 (408)
|++.+ .|+.||+|.|.
T Consensus 73 ~~~~d~~G~~Nnvi~V~ 89 (96)
T 1z0n_A 73 PIVTSQLGTVNNIIQVK 89 (96)
T ss_dssp CEEECTTSCEEEEEEEC
T ss_pred CeEECCCCCEeEEEEEc
Confidence 99887 79999999984
No 2
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.87 E-value=1.1e-22 Score=192.97 Aligned_cols=82 Identities=26% Similarity=0.470 Sum_probs=75.2
Q ss_pred ceEEEEEEec-CCceEEEEeeeCCCccccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEeeeCCCCCe
Q 015355 316 LEVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 394 (408)
Q Consensus 316 Lr~VTFtW~g-~AkeV~VaGSFNNW~~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~~DPd~Pt 394 (408)
.++|+|+|.+ +|++|+|+|+|++|+..++|.++ ...|.|++++.||||.|+|||+|||+|++||++|.
T Consensus 169 k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~-----------~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~ 237 (294)
T 3nme_A 169 RKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLG-----------KGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPF 237 (294)
T ss_dssp CEEEEEEEECSSCSCEEEEETTTEEEEEEECEEC-----------TTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCE
T ss_pred cccceeeeccCCCCEEEEEEeccCCCCcccceEc-----------CCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCe
Confidence 3899999999 59999999999999988999986 24799999999999999999999999999999998
Q ss_pred e-cC-CCccceEEEeC
Q 015355 395 V-TK-GGICNNILRVI 408 (408)
Q Consensus 395 v-tD-~GnvNNVLeVe 408 (408)
+ .| .|++||||.|.
T Consensus 238 ~~~d~~G~~nn~~~v~ 253 (294)
T 3nme_A 238 IGPNKDGHTNNYAKVV 253 (294)
T ss_dssp ECSCTTSCCEEEEEEC
T ss_pred eeECCCCCEeEEEEEC
Confidence 7 56 89999999984
No 3
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.87 E-value=2.8e-22 Score=189.46 Aligned_cols=84 Identities=31% Similarity=0.438 Sum_probs=77.3
Q ss_pred CceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEeeeCCCCCe
Q 015355 315 GLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 394 (408)
Q Consensus 315 gLr~VTFtW~g~AkeV~VaGSFNNW~~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~~DPd~Pt 394 (408)
.+++|+|+|.++|++|+|+|+|++|++.++|.+.. .++|.|++++.|+||+|+|||+|||+|++||++|+
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~----------~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~ 71 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDS----------DNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPT 71 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECS----------SSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceecc----------CCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCE
Confidence 46899999999999999999999999888998742 35789999999999999999999999999999999
Q ss_pred ecC-CCccceEEEeC
Q 015355 395 VTK-GGICNNILRVI 408 (408)
Q Consensus 395 vtD-~GnvNNVLeVe 408 (408)
+.+ .|+.||+|.|.
T Consensus 72 ~~d~~G~~nNvi~V~ 86 (252)
T 2qlv_B 72 ATDQMGNFVNYIEVR 86 (252)
T ss_dssp EBCSSCCCEEEEEEC
T ss_pred EecCCCcCcceeecc
Confidence 987 79999999984
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.51 E-value=1.9e-14 Score=149.37 Aligned_cols=78 Identities=19% Similarity=0.233 Sum_probs=67.5
Q ss_pred CceEEEEEEec--CCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEee--eC
Q 015355 315 GLEVVEIQYSG--DGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK--VD 389 (408)
Q Consensus 315 gLr~VTFtW~g--~AkeV~VaGSFNNW~~~-IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~--~D 389 (408)
+..+|+|++.. +|++|+|+|+||+|++. .+|.+ .+|.|++++.||||+|||||+|||+|. +|
T Consensus 16 ~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~-------------~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d 82 (696)
T 4aee_A 16 GRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK-------------IEEQGIVYLKLWPGEYGYGFQIDNDFENVLD 82 (696)
T ss_dssp EEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE-------------ETTEEEEEEEECSEEEEEEEEETTCCSCCCC
T ss_pred CcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe-------------cCCeEEEEEEcCCceEEEEEEECCEEeecCC
Confidence 55789998887 59999999999999764 67875 489999999999999999999999999 88
Q ss_pred CCCCeec---C-CCccceEE
Q 015355 390 PQRESVT---K-GGICNNIL 405 (408)
Q Consensus 390 Pd~Ptvt---D-~GnvNNVL 405 (408)
|++|... + .|..|+|.
T Consensus 83 ~~~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 83 PDNEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp TTCCCEEEEECSSCTTSEEE
T ss_pred CCCCcccccccCCcccccee
Confidence 9988755 3 68899985
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.17 E-value=3.4e-11 Score=123.52 Aligned_cols=67 Identities=22% Similarity=0.509 Sum_probs=59.6
Q ss_pred eEEEEEEecCCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEeeeCCCCCee
Q 015355 317 EVVEIQYSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV 395 (408)
Q Consensus 317 r~VTFtW~g~AkeV~VaGSFNNW~~~-IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~~DPd~Ptv 395 (408)
..|.|.++..|+.|+|.|+||+|.+. .+|++ .++.|.+++.||||.|+|||+|||+|..||.+|..
T Consensus 17 ~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~-------------~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~ 83 (645)
T 4aef_A 17 AEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ-------------EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPER 83 (645)
T ss_dssp EEEEEEEECCSSCEEEEETTTTTCTTSSEEEE-------------CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCCE
T ss_pred EEEEEecCCCCeEEEEEEcCCCCCCCcccceE-------------cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCCc
Confidence 56888899889999999999999864 67765 46899999999999999999999999999999875
Q ss_pred c
Q 015355 396 T 396 (408)
Q Consensus 396 t 396 (408)
.
T Consensus 84 ~ 84 (645)
T 4aef_A 84 R 84 (645)
T ss_dssp E
T ss_pred c
Confidence 4
No 6
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.27 E-value=2.1e-06 Score=73.54 Aligned_cols=60 Identities=23% Similarity=0.571 Sum_probs=47.7
Q ss_pred CceEEEEEEecC---CceEEEEee---eCCCccc--cccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEE
Q 015355 315 GLEVVEIQYSGD---GEIVEVAGS---FNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV 382 (408)
Q Consensus 315 gLr~VTFtW~g~---AkeV~VaGS---FNNW~~~--IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIV 382 (408)
....|+|+.... ++.|+|+|+ +.+|++. ++|....- ......|++++.||.| .+||||+|
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~--------~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPEND--------TGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCT--------TCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCcccccccccccc--------CCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 447889988763 899999999 8999974 68876310 0156899999999998 59999999
No 7
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.22 E-value=3.2e-06 Score=81.98 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=64.3
Q ss_pred CCceEEEEEEecC-C-------ceEEEEeeeCCCcc------ccccCCCCCCCccccccccCCCeEEEEEEeCCceE-EE
Q 015355 314 SGLEVVEIQYSGD-G-------EIVEVAGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTY-EI 378 (408)
Q Consensus 314 sgLr~VTFtW~g~-A-------keV~VaGSFNNW~~------~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrY-EY 378 (408)
.+.+.|||.|.++ | ++|+|. +++|.. ..+|++. ...|+|..++.|++|.| .|
T Consensus 28 ~~~~~vtF~~~~p~a~~~~~~~~~V~~~--~~~~~d~~~~~~~~~m~r~-----------~~~~~W~~t~~l~~~~~~~Y 94 (403)
T 3c8d_A 28 DEMFEVTFWWRDPQGSEEYSTIKRVWVY--ITGVTDHHQNSQPQSMQRI-----------AGTDVWQWTTQLNANWRGSY 94 (403)
T ss_dssp SSEEEEEEEEECTTCSTTTCCCCEEEEE--ETTTC-------CCBCEEC-----------TTSSEEEEEEEEETTCEEEE
T ss_pred CCcEEEEEEeeCCCcccccCccceEEEE--CcCCCccccccCccccccC-----------CCCCeEEEEEEECCCcEEEE
Confidence 3568999999987 5 789998 334322 2468874 26899999999999999 99
Q ss_pred EEEEc------------------------CEeeeCCCCCeecC-C-CccceEEEe
Q 015355 379 KFIVD------------------------GQWKVDPQRESVTK-G-GICNNILRV 407 (408)
Q Consensus 379 KFIVD------------------------GeW~~DPd~PtvtD-~-GnvNNVLeV 407 (408)
.|+|| |..+.||.+|.... . |...|+|+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~ 149 (403)
T 3c8d_A 95 CFIPTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM 149 (403)
T ss_dssp EEEEESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC
T ss_pred EEEecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC
Confidence 99999 78899999998764 4 777888875
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.82 E-value=1.1e-05 Score=66.09 Aligned_cols=75 Identities=27% Similarity=0.538 Sum_probs=55.4
Q ss_pred CceEEEEEEecC---CceEEEEeee---CCCccc--cccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEE-c-
Q 015355 315 GLEVVEIQYSGD---GEIVEVAGSF---NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 383 (408)
Q Consensus 315 gLr~VTFtW~g~---AkeV~VaGSF---NNW~~~--IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIV-D- 383 (408)
+...|+|..... |+.|+|+|+. .+|++. ++|.... -....+.|++++.||+| .+||||+| |
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~--------~~~~~~~W~~~v~lp~~~~~eYKy~v~~~ 76 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADK--------YTSSDPLWYVTVTLPAGESFEYKFIRIES 76 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSS--------SSSSCSSCEEEECCCSSSCEECCCEECCS
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccc--------cCCcCCeEEEEEEeCCCCeEEEEEEEEcC
Confidence 346788887763 8999999986 589864 6887631 00145799999999999 59999999 3
Q ss_pred -C--EeeeCCCCCeecC
Q 015355 384 -G--QWKVDPQRESVTK 397 (408)
Q Consensus 384 -G--eW~~DPd~PtvtD 397 (408)
| .|..+|+.-....
T Consensus 77 ~g~~~WE~g~nR~~~~p 93 (108)
T 1ac0_A 77 DDSVEWESDPNREYTVP 93 (108)
T ss_dssp SSCCCCCCSSCCEECCC
T ss_pred CCCEEeccCCCEEEECC
Confidence 4 4888887766554
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.50 E-value=0.0003 Score=72.46 Aligned_cols=68 Identities=24% Similarity=0.357 Sum_probs=52.9
Q ss_pred eEEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEE---cCEe--ee
Q 015355 317 EVVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--KV 388 (408)
Q Consensus 317 r~VTFtW~g~-AkeV~VaGSFNNW~~-~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIV---DGeW--~~ 388 (408)
..|+|+..++ |+.|.|.|+|++|.. .++|.+. ...|+|++.+. +.+|.+ |+|.| ||.+ ..
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-----------~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~~ 92 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-----------KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLKS 92 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-----------TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEEC
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-----------CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEec
Confidence 5789975554 999999999999975 4789863 25799999997 778874 99999 6775 67
Q ss_pred CCCCCeec
Q 015355 389 DPQRESVT 396 (408)
Q Consensus 389 DPd~Ptvt 396 (408)
||-.....
T Consensus 93 DPya~~~~ 100 (617)
T 1m7x_A 93 DPYAFEAQ 100 (617)
T ss_dssp CTTCSSEE
T ss_pred Cccceeec
Confidence 88766544
No 10
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.28 E-value=0.00045 Score=73.60 Aligned_cols=69 Identities=26% Similarity=0.343 Sum_probs=52.8
Q ss_pred ceEEEEEEecC-CceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEE---cCEe--e
Q 015355 316 LEVVEIQYSGD-GEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--K 387 (408)
Q Consensus 316 Lr~VTFtW~g~-AkeV~VaGSFNNW~~~-IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIV---DGeW--~ 387 (408)
..-|+|+..++ |+.|.|.|+||+|... .+|.+. ...|+|.+.+. +.+|. .|||.| ||.| +
T Consensus 135 ~~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-----------~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~ 202 (722)
T 3k1d_A 135 VSGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-----------GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDR 202 (722)
T ss_dssp EEEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-----------GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEE
T ss_pred CceEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-----------CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEe
Confidence 34688976555 9999999999999864 689763 24699999997 88885 588888 5765 6
Q ss_pred eCCCCCeec
Q 015355 388 VDPQRESVT 396 (408)
Q Consensus 388 ~DPd~Ptvt 396 (408)
.||-...+.
T Consensus 203 ~DPya~~~~ 211 (722)
T 3k1d_A 203 ADPFAFGTE 211 (722)
T ss_dssp CCTTCSSBC
T ss_pred ecccceeec
Confidence 788776654
No 11
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.09 E-value=0.00085 Score=71.60 Aligned_cols=65 Identities=20% Similarity=0.380 Sum_probs=49.5
Q ss_pred EEEEEEec-CCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCeEEEEEE-------eCCceEEEEEEEc---CE
Q 015355 318 VVEIQYSG-DGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-------LYPGTYEIKFIVD---GQ 385 (408)
Q Consensus 318 ~VTFtW~g-~AkeV~VaGSFNNW~~~-IpM~Kd~ss~~~a~~~sk~~GvFsitL~-------LPPGrYEYKFIVD---Ge 385 (408)
.|+|+..+ .|+.|.|.|+|++|... ++|.+. ..|+|.+.+. +++|.+ |||.|+ |.
T Consensus 66 gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~------------~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~ 132 (755)
T 3aml_A 66 ATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD------------KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGA 132 (755)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC------------TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCC
T ss_pred eEEEEEECCCCCEEEEEEecCCCCCceeeceeC------------CCCEEEEEEcccccccCCCCCCE-EEEEEECCCCc
Confidence 58886554 59999999999999764 789763 5799999998 788875 888886 45
Q ss_pred e--eeCCCCCee
Q 015355 386 W--KVDPQRESV 395 (408)
Q Consensus 386 W--~~DPd~Ptv 395 (408)
| +.||-...+
T Consensus 133 ~~~~~dpya~~~ 144 (755)
T 3aml_A 133 WVDRIPAWIRYA 144 (755)
T ss_dssp CEEECCTTCSCE
T ss_pred EEecCCcchheE
Confidence 6 447755443
No 12
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=95.95 E-value=0.018 Score=48.46 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=52.0
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCeE-EEEEEeCCc-eEEEEEEEcCE--eee
Q 015355 317 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLW-STVLWLYPG-TYEIKFIVDGQ--WKV 388 (408)
Q Consensus 317 r~VTFtW~g~AkeV~VaGSFN--NW~~~--IpM~Kd~ss~~~a~~~sk~~GvF-sitL~LPPG-rYEYKFIVDGe--W~~ 388 (408)
.+|+|.|..+.+.|+|-..+. +|... ++|.+. .-++ | .+++.|+.| .++|+|. ||. |-.
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~-----------~~~g-w~~~TI~l~~g~~~~~~F~-dG~~~WDN 71 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA-----------EISG-YAKITVDIGSASQLEAAFN-DGNNNWDS 71 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE-----------TTTT-EEEEEEECTTCSCEEEEEE-CSSSCEES
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc-----------cCCC-eEEEEEECCCCCEEEEEEe-CCCCcCcC
Confidence 578999998899999999984 89864 678652 1134 6 699999976 8999995 875 998
Q ss_pred CCCCCeec
Q 015355 389 DPQRESVT 396 (408)
Q Consensus 389 DPd~Ptvt 396 (408)
++......
T Consensus 72 n~g~Nyt~ 79 (104)
T 2laa_A 72 NNTKNYSF 79 (104)
T ss_dssp TTTSCEEE
T ss_pred CCCccEEe
Confidence 87766543
No 13
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=95.88 E-value=0.024 Score=58.96 Aligned_cols=70 Identities=21% Similarity=0.392 Sum_probs=52.9
Q ss_pred ceEEEEEEec-----CCceEEEEeeeC---CCcc--------cc-ccCCCCCCCccccccccCCCeEEEEEEeCCc-eEE
Q 015355 316 LEVVEIQYSG-----DGEIVEVAGSFN---GWHH--------RI-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYE 377 (408)
Q Consensus 316 Lr~VTFtW~g-----~AkeV~VaGSFN---NW~~--------~I-pM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYE 377 (408)
...|+|+... .|+.|+|+|+.. +|++ .+ +|.. .....|++++.||+| .+|
T Consensus 581 ~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~------------~~~~~W~~~v~l~~~~~~e 648 (686)
T 1qho_A 581 QTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLA------------PNYPDWFYVFSVPAGKTIQ 648 (686)
T ss_dssp EEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBC------------TTTTSEEEEEEEETTCEEE
T ss_pred eEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhccccc------------CCCCcEEEEEEeCCCCeEE
Confidence 4678888765 478999999984 8987 24 5543 246789999999998 599
Q ss_pred EEEEE---cC--EeeeCCCCCeecC
Q 015355 378 IKFIV---DG--QWKVDPQRESVTK 397 (408)
Q Consensus 378 YKFIV---DG--eW~~DPd~PtvtD 397 (408)
|||+| +| .|...|+.-....
T Consensus 649 yKy~~~~~~~~~~We~~~nr~~~~~ 673 (686)
T 1qho_A 649 FKFFIKRADGTIQWENGSNHVATTP 673 (686)
T ss_dssp EEEEEECTTSCEEECCSSCEEEECC
T ss_pred EEEEEEcCCCCEEeCCCCCeeEECC
Confidence 99997 34 4888777666554
No 14
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.80 E-value=0.0095 Score=63.12 Aligned_cols=56 Identities=9% Similarity=0.097 Sum_probs=43.7
Q ss_pred EEEEEEec-CCceEEEEeeeCCCcc-----ccccCCCCCCCccccccccCCCeEEEEEE-eC------CceEEEEEEEcC
Q 015355 318 VVEIQYSG-DGEIVEVAGSFNGWHH-----RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LY------PGTYEIKFIVDG 384 (408)
Q Consensus 318 ~VTFtW~g-~AkeV~VaGSFNNW~~-----~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LP------PGrYEYKFIVDG 384 (408)
.|+|+..+ .|+.|.|.+ |++|.. .++|.+. ..|+|.+.+. +. +|.|.|+|.|+|
T Consensus 17 ~~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g 83 (750)
T 1bf2_A 17 NITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA------------GSGVWAVTVPVSSIKAAGITGAVYYGYRAWG 83 (750)
T ss_dssp EEEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC------------STTEEEEEEEHHHHHHTTCCSCCEEEEEEEB
T ss_pred EEEEEEECCCCCEEEEEE-EccCCCCccceEEecccC------------CCCEEEEEECCcccccccCCCCEEEEEEEEe
Confidence 38887555 499999998 987653 4678753 5699999986 66 899999999997
Q ss_pred Ee
Q 015355 385 QW 386 (408)
Q Consensus 385 eW 386 (408)
.|
T Consensus 84 ~~ 85 (750)
T 1bf2_A 84 PN 85 (750)
T ss_dssp TT
T ss_pred ee
Confidence 53
No 15
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.80 E-value=0.033 Score=57.82 Aligned_cols=74 Identities=22% Similarity=0.316 Sum_probs=54.7
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEE-
Q 015355 315 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 382 (408)
Q Consensus 315 gLr~VTFtW~g----~AkeV~VaGSFN---NW~~~--I-pM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIV- 382 (408)
+...|+|+... .++.|+|+|+-. +|++. + +|.... ......|++++.||.| .+||||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~v~~ 648 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQV---------VYSYPTWYIDVSVPEGKTIEFKFIKK 648 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEESSCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 35678888865 389999999885 99864 5 676410 0246799999999988 79999997
Q ss_pred --cC--EeeeCCCCCeecC
Q 015355 383 --DG--QWKVDPQRESVTK 397 (408)
Q Consensus 383 --DG--eW~~DPd~PtvtD 397 (408)
+| .|-..|+.-....
T Consensus 649 ~~~~~~~WE~g~Nr~~~~~ 667 (680)
T 1cyg_A 649 DSQGNVTWESGSNHVYTTP 667 (680)
T ss_dssp CTTSCEEECCSSCEEEECC
T ss_pred eCCCCeEeCCCCCeeEECC
Confidence 34 4877776665554
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.68 E-value=0.035 Score=58.00 Aligned_cols=73 Identities=27% Similarity=0.519 Sum_probs=52.9
Q ss_pred eEEEEEEecC---CceEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEE---cC
Q 015355 317 EVVEIQYSGD---GEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV---DG 384 (408)
Q Consensus 317 r~VTFtW~g~---AkeV~VaGSFN---NW~~~--IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIV---DG 384 (408)
+.|+|..... |+.|+|+|+-. +|++. ++|.... -...+..|++++.||+| .+||||+| +|
T Consensus 497 v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~--------~t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g 568 (599)
T 2vn4_A 497 VAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVN--------YADNHPLWIGTVNLEAGDVVEYKYINVGQDG 568 (599)
T ss_dssp EEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTT--------CBTTBCEEEEEEEEETTCEEEEEEEEECTTC
T ss_pred EEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeeccccc--------CCCCCCcEEEEEEcCCCCcEEEEEEEECCCC
Confidence 5688887663 89999999884 89863 6787631 00124789999999998 59999998 33
Q ss_pred --EeeeCCCCCeecC
Q 015355 385 --QWKVDPQRESVTK 397 (408)
Q Consensus 385 --eW~~DPd~PtvtD 397 (408)
.|...|+.-....
T Consensus 569 ~~~WE~g~NR~~~~p 583 (599)
T 2vn4_A 569 SVTWESDPNHTYTVP 583 (599)
T ss_dssp CEEECCSSCEEEECC
T ss_pred ceEeCCCCCEEEecC
Confidence 3777776655544
No 17
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=95.47 E-value=0.013 Score=59.79 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=49.8
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEEcCE-eeeCCCCCe
Q 015355 318 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-WKVDPQRES 394 (408)
Q Consensus 318 ~VTFtW~g~-AkeV~VaGSFNNW~~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIVDGe-W~~DPd~Pt 394 (408)
.|+|+..++ |+.|.|.|.|+ ..++|.+. ..|+|.+.+. +.+|. .|+|.|||. ...||....
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~------------~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD------------EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC------------TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC------------CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 578876555 99999999987 56899874 4699999996 88895 699999997 788997654
No 18
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=95.38 E-value=0.025 Score=58.93 Aligned_cols=54 Identities=24% Similarity=0.338 Sum_probs=42.7
Q ss_pred EEEEEEec-CCceEEEEeeeCCCc--cccccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEEcCE
Q 015355 318 VVEIQYSG-DGEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ 385 (408)
Q Consensus 318 ~VTFtW~g-~AkeV~VaGSFNNW~--~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIVDGe 385 (408)
.|+|+..+ .|+.|.|.+ |+++. ..++|.+. ..|+|.+.+. +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPGH------------SGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCEE------------ETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCC------------CCCEEEEEECCCCCCCE-EEEEEeee
Confidence 58887555 499999999 98765 35789752 5699999885 788887 99999984
No 19
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.26 E-value=0.038 Score=57.42 Aligned_cols=73 Identities=22% Similarity=0.325 Sum_probs=52.8
Q ss_pred ceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEE-c
Q 015355 316 LEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D 383 (408)
Q Consensus 316 Lr~VTFtW~g----~AkeV~VaGSFN---NW~~~--I-pM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIV-D 383 (408)
...|+|+... .++.|+|+|+.. +|++. + +|.... ......|++++.||.| .+||||++ |
T Consensus 583 ~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~~ 653 (683)
T 3bmv_A 583 QICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQV---------VYQYPTWYYDVSVPAGTTIQFKFIKKN 653 (683)
T ss_dssp EEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSS---------SSCTTSEEEEEEEETTCEEEEEEEEES
T ss_pred eEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccC---------CCCCCcEEEEEEeCCCCcEEEEEEEEc
Confidence 4678888866 389999999986 99863 5 676410 0146799999999988 79999997 3
Q ss_pred C---EeeeCCCCCeecC
Q 015355 384 G---QWKVDPQRESVTK 397 (408)
Q Consensus 384 G---eW~~DPd~PtvtD 397 (408)
+ .|-..|+.-.+..
T Consensus 654 ~~~~~WE~g~Nr~~~~~ 670 (683)
T 3bmv_A 654 GNTITWEGGSNHTYTVP 670 (683)
T ss_dssp SSCCEECCSSCEEEECC
T ss_pred CCceEecCCCCeeEECC
Confidence 2 4666665554443
No 20
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.20 E-value=0.023 Score=58.63 Aligned_cols=62 Identities=19% Similarity=0.198 Sum_probs=48.7
Q ss_pred EEEEEEec-CCceEEEEeeeCCCccccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEeeeCCCCCeec
Q 015355 318 VVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT 396 (408)
Q Consensus 318 ~VTFtW~g-~AkeV~VaGSFNNW~~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~~DPd~Ptvt 396 (408)
.|+|+... .|+.|.|.|. ...++|.+. ..|+|.+.+.+.+|.+ |+|.|||....||......
T Consensus 35 ~~~f~vwap~a~~v~l~~~----~~~~~m~~~------------~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN----GTEHVMTSL------------GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET----TEEEECEEE------------ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc----CCEEeCeeC------------CCcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 68886555 4999999994 246889863 4689999999889986 9999999767888766543
No 21
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=95.14 E-value=0.033 Score=58.76 Aligned_cols=55 Identities=20% Similarity=0.315 Sum_probs=42.5
Q ss_pred EEEEEEec-CCceEEEEeeeCCCc-----cccccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEEcCEe
Q 015355 318 VVEIQYSG-DGEIVEVAGSFNGWH-----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQW 386 (408)
Q Consensus 318 ~VTFtW~g-~AkeV~VaGSFNNW~-----~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIVDGeW 386 (408)
.|+|+..+ .|+.|.|.+ |+.+. ..++|.+. ..|+|.+.+. +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~------------~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNK------------TGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEE------------SSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccC------------CCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 58887555 499999999 87544 24788762 5799999985 789987 999999854
No 22
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.01 E-value=0.051 Score=56.49 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=52.6
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEE-
Q 015355 315 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 382 (408)
Q Consensus 315 gLr~VTFtW~g----~AkeV~VaGSFN---NW~~~--I-pM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIV- 382 (408)
....|+|+... .|+.|+|+|+.. +|++. + +|.... ......|++++.||.| .+||||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 655 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQV---------VYQYPNWYYDVSVPAGKTIEFKFLKK 655 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCeEEEEEEeCCCCcEEEEEEEE
Confidence 34678888865 389999999885 99864 5 565410 0245799999999988 79999997
Q ss_pred c-C--EeeeCCCCCeecC
Q 015355 383 D-G--QWKVDPQRESVTK 397 (408)
Q Consensus 383 D-G--eW~~DPd~PtvtD 397 (408)
| + .|-..++.-....
T Consensus 656 ~~~~~~WE~g~Nr~~~~~ 673 (686)
T 1d3c_A 656 QGSTVTWEGGSNHTFTAP 673 (686)
T ss_dssp ETTEEEECCSSCEEEECC
T ss_pred cCCceEecCCCCeEEECC
Confidence 3 2 3666655544443
No 23
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.36 E-value=0.088 Score=54.11 Aligned_cols=71 Identities=20% Similarity=0.288 Sum_probs=51.6
Q ss_pred ceEEEEEEec----CCceEEEEeeeC---CCccc---cccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEE-c
Q 015355 316 LEVVEIQYSG----DGEIVEVAGSFN---GWHHR---IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D 383 (408)
Q Consensus 316 Lr~VTFtW~g----~AkeV~VaGSFN---NW~~~---IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIV-D 383 (408)
.+.|+|.... .|+.|+|+|+-. +|+.. ++|... ..++.|++++.||.| ..||||+| |
T Consensus 419 ~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-----------~~p~~W~~~v~lp~~~~~eYKyv~~~ 487 (516)
T 1vem_A 419 PVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-----------SHSNDWRGNVVLPAERNIEFKAFIKS 487 (516)
T ss_dssp EEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-----------TTTTEEEEEEEEETTCCEEEEEEEEC
T ss_pred ccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-----------CCCCEEEEEEEECCCCcEEEEEEEEe
Confidence 4788998765 389999999984 89865 356531 234599999999988 59999997 3
Q ss_pred --C---EeeeCCCCCeecC
Q 015355 384 --G---QWKVDPQRESVTK 397 (408)
Q Consensus 384 --G---eW~~DPd~PtvtD 397 (408)
| .|-..++.-..+.
T Consensus 488 ~~g~v~~WE~g~NR~~~~p 506 (516)
T 1vem_A 488 KDGTVKSWQTIQQSWNPVP 506 (516)
T ss_dssp TTSCEEEECSSCEEESSCC
T ss_pred CCCCeeEEeCCCCEEEecC
Confidence 2 4766665544443
No 24
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=93.91 E-value=0.091 Score=55.19 Aligned_cols=66 Identities=18% Similarity=0.201 Sum_probs=48.2
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEEc--CEe--eeCC
Q 015355 318 VVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD--GQW--KVDP 390 (408)
Q Consensus 318 ~VTFtW~g~-AkeV~VaGSFNNW~~-~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIVD--GeW--~~DP 390 (408)
.|+|+...+ |+.|.|.+.|++|.. .++|.+. ..|+|.+.+. +.+|. .|+|.|+ |.| ..||
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DP 180 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL------------EKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQ 180 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC------------GGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCT
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC------------CCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCC
Confidence 588875555 999999999988864 4789874 4689999987 45663 4666664 775 5688
Q ss_pred CCCeec
Q 015355 391 QRESVT 396 (408)
Q Consensus 391 d~Ptvt 396 (408)
....+.
T Consensus 181 ya~~~~ 186 (718)
T 2e8y_A 181 YAKAVT 186 (718)
T ss_dssp TCSSBC
T ss_pred cccccc
Confidence 776544
No 25
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=93.81 E-value=0.083 Score=53.81 Aligned_cols=59 Identities=14% Similarity=0.057 Sum_probs=43.0
Q ss_pred eEEEEE-EecCCceEEE-EeeeCCCcc----ccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEc
Q 015355 317 EVVEIQ-YSGDGEIVEV-AGSFNGWHH----RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 383 (408)
Q Consensus 317 r~VTFt-W~g~AkeV~V-aGSFNNW~~----~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVD 383 (408)
..++|+ |...++.|.| .|+|++|.. .++|.+... ++..|+|++.+......+.|+|.|.
T Consensus 23 ~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 23 LRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGS--------DERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp EEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEE--------CSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeec--------CCCEEEEEEEEECCCCeEEEEEEEE
Confidence 445553 4456999999 899999965 478986410 1124579999998877889999985
No 26
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=92.93 E-value=0.13 Score=57.44 Aligned_cols=67 Identities=18% Similarity=0.105 Sum_probs=49.6
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc-ccccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEEc------CE--
Q 015355 318 VVEIQYSGD-GEIVEVAG-SFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD------GQ-- 385 (408)
Q Consensus 318 ~VTFtW~g~-AkeV~VaG-SFNNW~~-~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIVD------Ge-- 385 (408)
.|+|+...+ |+.|.|.+ +|++|.. .++|.+. ...|+|.+.+. +.+|.| |+|.|+ |.
T Consensus 305 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-----------~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~ 372 (1083)
T 2fhf_A 305 GVTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-----------SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVE 372 (1083)
T ss_dssp EEEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-----------TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCEEEEEEEcCCCCccceEECeEC-----------CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccc
Confidence 588875555 99999999 8899975 4788753 25689999885 788865 888875 43
Q ss_pred --eeeCCCCCeec
Q 015355 386 --WKVDPQRESVT 396 (408)
Q Consensus 386 --W~~DPd~Ptvt 396 (408)
...||......
T Consensus 373 ~~~~~DPYa~~~~ 385 (1083)
T 2fhf_A 373 QYEVTDPYAHSLS 385 (1083)
T ss_dssp EEEECCTTCSCBC
T ss_pred cceecCCccceec
Confidence 46788776544
No 27
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=92.26 E-value=0.12 Score=52.75 Aligned_cols=60 Identities=15% Similarity=0.172 Sum_probs=43.5
Q ss_pred ceEEEEE-EecCCceEEE-EeeeCCCcc------ccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEc
Q 015355 316 LEVVEIQ-YSGDGEIVEV-AGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 383 (408)
Q Consensus 316 Lr~VTFt-W~g~AkeV~V-aGSFNNW~~------~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVD 383 (408)
..+++|+ |...++.|.| .|+|++|.. .++|.+..+ +...|.|++.+......+.|+|.|+
T Consensus 22 ~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 22 TLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGS--------DELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp CEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEE--------CSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred EEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeec--------CCCeEEEEEEEECCCcEEEEEEEEE
Confidence 4566665 4556999999 799999964 478986410 1124679999988777888999885
No 28
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=91.10 E-value=0.04 Score=55.39 Aligned_cols=70 Identities=20% Similarity=0.411 Sum_probs=0.0
Q ss_pred ceEEEEEE-ec---CCceEEEEeeeC---CCcc--ccccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEE-c-
Q 015355 316 LEVVEIQY-SG---DGEIVEVAGSFN---GWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 383 (408)
Q Consensus 316 Lr~VTFtW-~g---~AkeV~VaGSFN---NW~~--~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIV-D- 383 (408)
..+|+|+. .. .|+.|+|+|+-. +|++ .++|... .....|++++.||+| .+||||+| |
T Consensus 430 ~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-----------~~~~~W~~~v~lp~~~~~eyKy~~~~~ 498 (527)
T 1gcy_A 430 LVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-----------SGYPTWKGSIALPAGQNEEWKCLIRNE 498 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-----------CCCCeEEEEEEeCCCCcEEEEEEEEeC
Confidence 35677776 33 389999999885 8987 3678631 145789999999999 69999996 3
Q ss_pred -C-----EeeeCCCCCeec
Q 015355 384 -G-----QWKVDPQRESVT 396 (408)
Q Consensus 384 -G-----eW~~DPd~Ptvt 396 (408)
| .|...|+.-...
T Consensus 499 ~~~~~~~~We~g~nr~~~~ 517 (527)
T 1gcy_A 499 ANATQVRQWQGGANNSLTP 517 (527)
T ss_dssp -------------------
T ss_pred CCCcceeEecCCCCeeEEC
Confidence 3 376666655443
No 29
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=90.98 E-value=0.31 Score=53.07 Aligned_cols=63 Identities=16% Similarity=0.243 Sum_probs=45.8
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc----cccccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEE--cCE--ee
Q 015355 318 VVEIQYSGD-GEIVEVAGSFNGWH----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQ--WK 387 (408)
Q Consensus 318 ~VTFtW~g~-AkeV~VaGSFNNW~----~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIV--DGe--W~ 387 (408)
.|+|+...+ |..|.|.+ |++|. ..++|.+. ..|+|.+.+. +.+|.+ |+|.| +|. ..
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~g~~-Y~y~v~~~g~~~~~ 391 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS------------DNGTWKLQVSGNLENWY-YLYQVTVNGTTQTA 391 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC------------GGGEEEEEEESCCTTCE-EEEEEECSSCEEEE
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC------------CCCEEEEEEccCCCCCE-EEEEEEeCCeEEEe
Confidence 588876555 99999997 99994 34789864 4689999986 567753 66666 565 45
Q ss_pred eCCCCCe
Q 015355 388 VDPQRES 394 (408)
Q Consensus 388 ~DPd~Pt 394 (408)
.||-...
T Consensus 392 ~DPya~~ 398 (921)
T 2wan_A 392 VDPYARA 398 (921)
T ss_dssp CCTTCSS
T ss_pred cCCccee
Confidence 6886654
No 30
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=90.86 E-value=0.4 Score=49.87 Aligned_cols=62 Identities=19% Similarity=0.235 Sum_probs=46.4
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCeEEEEEE-eCCceEEEEEEEc-CEeeeCCCCCe
Q 015355 318 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD-GQWKVDPQRES 394 (408)
Q Consensus 318 ~VTFtW~g~-AkeV~VaGSFNNW~~~IpM~Kd~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIVD-GeW~~DPd~Pt 394 (408)
.|+|+..++ |+.|.|.+ +|. .++|.+. ..|.|.+.+. +.+|. .|+|.|+ |....||....
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~-~~~m~~~------------~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~ 105 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGK-DQEMQAN------------GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRA 105 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTE-EEECEEC------------STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEE---CCC-cccCeec------------CCEEEEEEeCCCCCCC-EEEEEEeCCeEecccccee
Confidence 578876555 99999998 354 4789874 4689999884 77886 5899995 56888997765
Q ss_pred ec
Q 015355 395 VT 396 (408)
Q Consensus 395 vt 396 (408)
..
T Consensus 106 ~~ 107 (618)
T 3m07_A 106 QK 107 (618)
T ss_dssp BS
T ss_pred ee
Confidence 44
No 31
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=90.79 E-value=0.27 Score=51.16 Aligned_cols=103 Identities=17% Similarity=0.023 Sum_probs=59.5
Q ss_pred HhhhhhhhhhhhhhccccccccccchHHHHHHHhhcCCc------eEEEEEEecC-CceEEEEeeeCCCcccc--ccCCC
Q 015355 278 KLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLSGL------EVVEIQYSGD-GEIVEVAGSFNGWHHRI--KMDPL 348 (408)
Q Consensus 278 K~~lsvlq~k~~~ei~~AqkLl~eK~~~LdaAe~aLsgL------r~VTFtW~g~-AkeV~VaGSFNNW~~~I--pM~Kd 348 (408)
|.+|.|.+.-+.-.+..|..+=- ...||+.-.-...+ .-|+|+..++ |+.|.|.+-+++|.... .|.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~q~--~~~~d~~~~y~~plGa~~~~~g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~- 169 (884)
T 4aio_A 93 KCQLVVASFGADGKHVDVTGLQL--PGVLDDMFAYTGPLGAVFSEDSVSLHLWAPTAQGVSVCFFDGPAGPALETVQLK- 169 (884)
T ss_dssp TSEEEEEEECTTSSEEEEEEEEC--HHHHHHHHCCCSCCEEEECSSEEEEEEECTTCSEEEEEEESTTTSCEEEEEECE-
T ss_pred hcceEEEEECCCCCEeecccccc--CcccccccccCCCccCEEECCEEEEEEECCCCCEEEEEEEeCCCCCeeeeeeec-
Confidence 34565555444444444433211 23456544321112 2488975554 99999999555665442 2332
Q ss_pred CCCCccccccccCCCeEEEEEE-eCCceEEEEEEEcCE----------eeeCCCCCee
Q 015355 349 PSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ----------WKVDPQRESV 395 (408)
Q Consensus 349 ~ss~~~a~~~sk~~GvFsitL~-LPPGrYEYKFIVDGe----------W~~DPd~Ptv 395 (408)
+..|+|++.+. +.+|.+ |+|.|+|. ...||-...+
T Consensus 170 -----------~~~g~W~~~~~~~~~g~~-Y~y~v~~~~~~~~~~~~~~~~DPya~~~ 215 (884)
T 4aio_A 170 -----------ESNGVWSVTGPREWENRY-YLYEVDVYHPTKAQVLKCLAGDPYARSL 215 (884)
T ss_dssp -----------EETTEEEEEEEGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCSEE
T ss_pred -----------CCCCEEEEEECCCCCCCE-EEEEEeCCCCCcccccCccccCCCeeee
Confidence 35799999986 567754 88888752 3468866543
No 32
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=90.70 E-value=0.38 Score=50.53 Aligned_cols=64 Identities=19% Similarity=0.296 Sum_probs=46.4
Q ss_pred EEEEEec-CCceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCeEEEEEEe--CCc-----eEEEEEEEc--C
Q 015355 319 VEIQYSG-DGEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWL--YPG-----TYEIKFIVD--G 384 (408)
Q Consensus 319 VTFtW~g-~AkeV~VaG-SFNNW~~---~IpM~Kd~ss~~~a~~~sk~~GvFsitL~L--PPG-----rYEYKFIVD--G 384 (408)
|+|+..+ .|+.|.|.+ ++++|.. .++|.+. ..|+|.+.+.- .+| -+.|+|.|+ |
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~ 93 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQG 93 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSSCSCCTTCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC------------CCCEEEEEECCccCCCccccCCcEEEEEEEeCC
Confidence 7887555 499999999 7888864 5789763 46999998863 134 266888886 6
Q ss_pred Ee--eeCCCCCe
Q 015355 385 QW--KVDPQRES 394 (408)
Q Consensus 385 eW--~~DPd~Pt 394 (408)
.+ ..||-...
T Consensus 94 ~~~~~~DPya~~ 105 (714)
T 2ya0_A 94 KTVLALDPYAKS 105 (714)
T ss_dssp EEEEECCTTCSE
T ss_pred ceEEecCCceee
Confidence 54 57997654
No 33
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=90.49 E-value=0.22 Score=54.33 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=48.2
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCeEEEEEEeCCce-----EEEEEEEc--CE-
Q 015355 319 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGT-----YEIKFIVD--GQ- 385 (408)
Q Consensus 319 VTFtW~g~-AkeV~VaG-SFNNW~~---~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGr-----YEYKFIVD--Ge- 385 (408)
|.|+..++ |+.|.|.+ ++++|.. .++|.+. ..|+|.+.+.+.||. +.|+|.|+ |.
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~ 213 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN------------NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDK 213 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC------------TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC------------CCCEEEEEECCCCCCccCCCeEEEEEEeeCCce
Confidence 78976555 99999998 6777853 5789763 579999999776762 67888886 33
Q ss_pred -eeeCCCCCee
Q 015355 386 -WKVDPQRESV 395 (408)
Q Consensus 386 -W~~DPd~Ptv 395 (408)
...||-...+
T Consensus 214 ~~~~DPYA~~~ 224 (877)
T 3faw_A 214 VKILDPYAKSL 224 (877)
T ss_dssp EEECCTTCSCB
T ss_pred eEecCccceec
Confidence 4668877544
No 34
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=87.18 E-value=0.68 Score=50.48 Aligned_cols=58 Identities=22% Similarity=0.358 Sum_probs=40.4
Q ss_pred EEEEEEecCCceEEEEeee-------CCCcccc---ccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEee
Q 015355 318 VVEIQYSGDGEIVEVAGSF-------NGWHHRI---KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 387 (408)
Q Consensus 318 ~VTFtW~g~AkeV~VaGSF-------NNW~~~I---pM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~ 387 (408)
+|..--...+..+.+.|+| .+|.+.- -|.+ ..+|.|+.+-.||+|.||||+.++|.|.
T Consensus 154 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~------------~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 154 PVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKK------------INPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEE------------EETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccccccccchhhhccccccCCCCCCcceeec------------cCCcceeeeeccCCcceeEEEeecCccc
Confidence 3333333445667888866 4677542 2322 1368999999999999999999998884
No 35
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=85.78 E-value=0.48 Score=48.73 Aligned_cols=60 Identities=10% Similarity=0.136 Sum_probs=40.9
Q ss_pred eEEEEEEe----c-CCceEEEEeeeCCCccccccCC--CCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcC
Q 015355 317 EVVEIQYS----G-DGEIVEVAGSFNGWHHRIKMDP--LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDG 384 (408)
Q Consensus 317 r~VTFtW~----g-~AkeV~VaGSFNNW~~~IpM~K--d~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDG 384 (408)
..|+|+.. . .++.|.|.+.|++=...++|.+ ... ++..|+|++.+........|+|.|+|
T Consensus 30 ~~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~~--------~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 30 QSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSNDP--------TGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEECT--------TSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeeccc--------cCCeeEEEEEEECCCceEEEEEEEEE
Confidence 35777644 3 4899999999874122478876 210 12457999999876566779999975
No 36
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=85.25 E-value=0.2 Score=51.05 Aligned_cols=59 Identities=19% Similarity=0.240 Sum_probs=41.9
Q ss_pred eEEEEE-EecCCceEEE-EeeeCCCcc---ccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEc
Q 015355 317 EVVEIQ-YSGDGEIVEV-AGSFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 383 (408)
Q Consensus 317 r~VTFt-W~g~AkeV~V-aGSFNNW~~---~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVD 383 (408)
..++|+ |...+++|.| .|+|++|.. .++|.+... +...|.|++.+......+.|||.|.
T Consensus 23 ~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~--------~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 23 VHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLAT--------DELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp EECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEE--------CSSCEEECCEECCTTSCEEECBCCE
T ss_pred EEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEec--------cCCeEEEEEEEECCCceEEEEEEEE
Confidence 445554 5556999999 799999975 478987411 1224679999988777788888873
No 37
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=83.43 E-value=1.1 Score=49.44 Aligned_cols=64 Identities=19% Similarity=0.306 Sum_probs=45.3
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCeEEEEEEeC--Cc-----eEEEEEEEc--C
Q 015355 319 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLY--PG-----TYEIKFIVD--G 384 (408)
Q Consensus 319 VTFtW~g~-AkeV~VaG-SFNNW~~---~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LP--PG-----rYEYKFIVD--G 384 (408)
|+|+..++ |+.|.|.+ +|++|.. .++|.+. ..|+|.+.+... +| -+.|+|.|+ |
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~ 400 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQG 400 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC------------CCCEEEEEEcccccCCccccCCcEEEEEEEeCC
Confidence 78876555 99999999 7888864 5789763 568999988631 23 256778775 5
Q ss_pred E--eeeCCCCCe
Q 015355 385 Q--WKVDPQRES 394 (408)
Q Consensus 385 e--W~~DPd~Pt 394 (408)
. ...||-...
T Consensus 401 ~~~~~~DPYa~~ 412 (1014)
T 2ya1_A 401 KTVLALDPYAKS 412 (1014)
T ss_dssp EEEEECCTTCSS
T ss_pred eEEEecCcccee
Confidence 4 457886543
No 38
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=79.75 E-value=1.2 Score=40.10 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=38.9
Q ss_pred CceEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEee
Q 015355 327 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 387 (408)
Q Consensus 327 AkeV~VaGSFNNW~~--~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~ 387 (408)
.+++||.|++++|.. ..+|.+.. ...|.|...+.|+-|. +|||.-+..|-
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~----------~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred cceEEEEecCCCCCCCccceeeecc----------CCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 678999999998863 36787642 2578999999998764 89999876553
No 39
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=79.23 E-value=4.4 Score=33.85 Aligned_cols=66 Identities=17% Similarity=0.272 Sum_probs=47.8
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEEcC--EeeeC
Q 015355 317 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDG--QWKVD 389 (408)
Q Consensus 317 r~VTFtW~g~AkeV~VaGSFN--NW~~~--IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIVDG--eW~~D 389 (408)
..+++.|..+...|+|==.+. +|... ++|.+. ...|.|..+|.|+.+ ..+|.| -|| .|-.+
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-----------~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN 77 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-----------EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNN 77 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-----------SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-----------ccCCceEEEEecCCCceEEEEE-eCCCcccccC
Confidence 467888887788888876664 48753 789752 136788999999975 899999 665 49776
Q ss_pred CCCCe
Q 015355 390 PQRES 394 (408)
Q Consensus 390 Pd~Pt 394 (408)
.....
T Consensus 78 ~g~Ny 82 (102)
T 2c3v_A 78 QGRDY 82 (102)
T ss_dssp GGTCE
T ss_pred CCcce
Confidence 55543
No 40
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.11 E-value=13 Score=36.73 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=34.6
Q ss_pred CceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEc
Q 015355 327 GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 383 (408)
Q Consensus 327 AkeV~VaGSFNNW~~~--IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVD 383 (408)
....||.|++++|... .+|.++. ...+.|.....+..+. +|||+.-
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDA----------LDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECS----------SCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeec----------CCCceEEEEEEeccCc-eEEEeec
Confidence 4679999999999854 4455432 3578999998887766 7999964
No 41
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.35 E-value=21 Score=31.66 Aligned_cols=71 Identities=11% Similarity=0.272 Sum_probs=45.8
Q ss_pred EEEEEEec--CCceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCeEEEEEEeCC-----c--eEEEEEEEcCE-
Q 015355 318 VVEIQYSG--DGEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYP-----G--TYEIKFIVDGQ- 385 (408)
Q Consensus 318 ~VTFtW~g--~AkeV~VaGSFNNW~~~--IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPP-----G--rYEYKFIVDGe- 385 (408)
.-++.... -.+.|.|.=+|++|... +++...++. .+......|...|.||+ + .+-.+|.|+|.
T Consensus 49 ~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~-----~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~e 123 (156)
T 2eef_A 49 AGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDT-----YAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQT 123 (156)
T ss_dssp EEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCCS-----SSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEE
T ss_pred EEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEcccc-----CCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCE
Confidence 33444444 27999999999999975 445443210 01123457999998886 3 56689999997
Q ss_pred -eeeCCCCC
Q 015355 386 -WKVDPQRE 393 (408)
Q Consensus 386 -W~~DPd~P 393 (408)
|-.+....
T Consensus 124 yWDNN~G~N 132 (156)
T 2eef_A 124 YWDSNRGKN 132 (156)
T ss_dssp EEESGGGSC
T ss_pred EecCCCCee
Confidence 76654443
No 42
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=47.76 E-value=29 Score=28.94 Aligned_cols=67 Identities=15% Similarity=0.179 Sum_probs=41.7
Q ss_pred EEEEEEecC--CceEEEEee--eCCCcc-cc--ccCCCCCCCccccccccCCCeEEEEEEeCCc-eEEEEEEEcCE--ee
Q 015355 318 VVEIQYSGD--GEIVEVAGS--FNGWHH-RI--KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ--WK 387 (408)
Q Consensus 318 ~VTFtW~g~--AkeV~VaGS--FNNW~~-~I--pM~Kd~ss~~~a~~~sk~~GvFsitL~LPPG-rYEYKFIVDGe--W~ 387 (408)
.-++....- .+.|.|.=+ |++|.. .. +....++ .+...-..|...+.||+. .+-.+|.|+|. |-
T Consensus 22 ~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~~------~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWD 95 (106)
T 2djm_A 22 SGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASFSGP------ISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYD 95 (106)
T ss_dssp EEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEEEEE------CTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEE
T ss_pred EEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEEecC------CCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEc
Confidence 334444443 688888877 999987 42 2222110 011234589999999866 57789999996 54
Q ss_pred eCC
Q 015355 388 VDP 390 (408)
Q Consensus 388 ~DP 390 (408)
.+.
T Consensus 96 NN~ 98 (106)
T 2djm_A 96 NNN 98 (106)
T ss_dssp CSS
T ss_pred CCC
Confidence 443
No 43
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.95 E-value=19 Score=35.51 Aligned_cols=53 Identities=15% Similarity=0.322 Sum_probs=36.9
Q ss_pred CceEEEEeeeCCCccc-------cccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEeeeCC
Q 015355 327 GEIVEVAGSFNGWHHR-------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDP 390 (408)
Q Consensus 327 AkeV~VaGSFNNW~~~-------IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~~DP 390 (408)
...+++.|++++|.-. .+|.+. ....+.|.....+.-| .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPV----------NGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEEC----------TTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccc----------cCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 5679999999888532 123221 1356888888887654 589999998886543
No 44
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.94 E-value=18 Score=30.05 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=31.8
Q ss_pred hCCCCCCCCChHHHhhhcchhHHHHHHhhhHHHHHHHH
Q 015355 75 VGLSESHVPSMKELSAHGRDDLANIVRRRGYKFIRQLL 112 (408)
Q Consensus 75 ~~l~~~~~psmkels~hgr~dla~~vrrrgyk~i~~l~ 112 (408)
-|..-..||+|+|-..=...|+|..+|++||+=+ |++
T Consensus 6 ~~m~~~~~ps~seV~~Wsp~~VadWLkk~g~~~c-d~l 42 (90)
T 2eap_A 6 SGMALRNVPFRSEVLGWDPDSLADYFKKLNYKDC-EKA 42 (90)
T ss_dssp CCSSTTCCCCHHHHTTCCTTTHHHHHHHTTCHHH-HHH
T ss_pred ccccccccccCccccccCHHHHHHHHHHcCCchH-HHH
Confidence 3667788999999999999999999999999764 444
No 45
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=37.10 E-value=37 Score=29.63 Aligned_cols=25 Identities=32% Similarity=0.461 Sum_probs=20.3
Q ss_pred EEEEeCCc-eEEEEEEEcCEeeeCCCC
Q 015355 367 TVLWLYPG-TYEIKFIVDGQWKVDPQR 392 (408)
Q Consensus 367 itL~LPPG-rYEYKFIVDGeW~~DPd~ 392 (408)
.++.|..| .|.|+| ++|.|+.+-+.
T Consensus 98 ~svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 98 RKVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred cEEEecCCCEEEEEE-cCCEEEEcccc
Confidence 34678889 899999 99999987553
No 46
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=34.94 E-value=27 Score=33.28 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=37.1
Q ss_pred CceEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCeEEEEEEeCCceEEEEEEEcCEee
Q 015355 327 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 387 (408)
Q Consensus 327 AkeV~VaGSFNNW~~--~IpM~Kd~ss~~~a~~~sk~~GvFsitL~LPPGrYEYKFIVDGeW~ 387 (408)
...+||.|++.+|.. ..+|.+.. ...|.|.....|+.| .+|||.-+..|-
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~----------~~~g~y~~~~yl~~~-~~fKf~~~~~~~ 200 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDAN-SEFKFGTKENEY 200 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TSTTEEEEEEEECTT-EEEEEESSTTCC
T ss_pred cceEEEeccccCCCCcccceeeecc----------CCCceEEEEEEecCC-ceEEeccccCCc
Confidence 578999999986643 34665532 357899999999866 679999876654
No 47
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=34.63 E-value=36 Score=28.94 Aligned_cols=64 Identities=8% Similarity=0.169 Sum_probs=52.3
Q ss_pred hhhHHHHHhhh--HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccccccccc-------hHHHHHHHhhcC
Q 015355 251 LEIDHLKFMLH--QKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDK-------DEELIAAEESLS 314 (408)
Q Consensus 251 ~E~~~l~~m~~--qkele~~r~k~qie~~K~~lsvlq~k~~~ei~~AqkLl~eK-------~~~LdaAe~aLs 314 (408)
-+-+++..|-. -++-++.+..+-+.++++++--++.|...++.+-+.+|.+- ..++.+|++.|.
T Consensus 33 ~q~~kiekmk~e~~dey~iKkq~evL~Et~~mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~ 105 (116)
T 3mxz_A 33 REAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVA 105 (116)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHH
Confidence 34566666765 37889999999999999999999999999999999999731 358888888754
No 48
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=34.16 E-value=62 Score=27.13 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=45.4
Q ss_pred hhhhHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccccccccchHHHHHHHhh
Q 015355 250 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 312 (408)
Q Consensus 250 ~~E~~~l~~m~~qkele~~r~k~qie~~K~~lsvlq~k~~~ei~~AqkLl~eK~~~LdaAe~a 312 (408)
.-||.+++-.+..-+.|+.-++.+...-..+|+-++.+.+.++..++..|.....+|..++..
T Consensus 35 k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 97 (129)
T 3tnu_B 35 KHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQD 97 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 457888887777777777666666555566677788888888888888887777666665543
No 49
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=30.79 E-value=60 Score=27.35 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=39.4
Q ss_pred hhhhHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccccccccchHHHHHHHhh
Q 015355 250 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 312 (408)
Q Consensus 250 ~~E~~~l~~m~~qkele~~r~k~qie~~K~~lsvlq~k~~~ei~~AqkLl~eK~~~LdaAe~a 312 (408)
.-||.+++..+..-+.|+..++.+...-..+|+-++.+.+.++.+++..|.....+|..++..
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 99 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCE 99 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777776666666666555555444455666777777888888888887766666655543
No 50
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=30.55 E-value=44 Score=26.81 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHHHhhCCCCCC-CCChHHHhhhcch
Q 015355 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAHGRD 94 (408)
Q Consensus 61 ~~el~~~~~ef~~~~~l~~~~-~psmkels~hgr~ 94 (408)
-+.+++.|++.+..-.+|.|. +||..||++.=.+
T Consensus 11 ~~~i~~~i~~~I~~g~~~~G~~lPs~~~La~~~~v 45 (113)
T 3tqn_A 11 YQQLRDKIVEAIIDGSYVEGEMIPSIRKISTEYQI 45 (113)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCEECCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCCCCCcCcCHHHHHHHHCc
Confidence 367999999999999999875 8999999986443
No 51
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=30.29 E-value=17 Score=28.37 Aligned_cols=14 Identities=36% Similarity=0.847 Sum_probs=11.6
Q ss_pred EcCEeeeCCCCCee
Q 015355 382 VDGQWKVDPQRESV 395 (408)
Q Consensus 382 VDGeW~~DPd~Ptv 395 (408)
|||+|.+||.-.+.
T Consensus 48 vdgeWsYD~ATkTF 61 (65)
T 1mhx_A 48 VDGEWTYDDAAKTF 61 (65)
T ss_dssp CCSEEEEETTTTEE
T ss_pred CccEEEecCceeEE
Confidence 69999999987664
No 52
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=29.97 E-value=44 Score=27.46 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=27.3
Q ss_pred cHHHHHHHHHHHHhhCCCCCC-CCChHHHhhh
Q 015355 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAH 91 (408)
Q Consensus 61 ~~el~~~~~ef~~~~~l~~~~-~psmkels~h 91 (408)
-+.+++.|++.+.+=.|+.|. +||..||++.
T Consensus 16 Y~QI~~~i~~~I~~G~l~pG~~LPser~La~~ 47 (134)
T 4ham_A 16 YEQIVQKIKEQVVKGVLQEGEKILSIREFASR 47 (134)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH
Confidence 367999999999999999995 9999999875
No 53
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=27.50 E-value=1.1e+02 Score=25.65 Aligned_cols=57 Identities=19% Similarity=0.387 Sum_probs=39.1
Q ss_pred eEEEEEEecC---CceEEEEe-eeCCCccccccCCCCCCCccccccccCCCeEEEEE-EeCCceEEEEEEE-cCEeeeC
Q 015355 317 EVVEIQYSGD---GEIVEVAG-SFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVL-WLYPGTYEIKFIV-DGQWKVD 389 (408)
Q Consensus 317 r~VTFtW~g~---AkeV~VaG-SFNNW~~~IpM~Kd~ss~~~a~~~sk~~GvFsitL-~LPPGrYEYKFIV-DGeW~~D 389 (408)
-.|.|.+.++ -..|+|.| +-.+| ++|.+ . ...|+..- ..+.|-+.||+.. ||+|.+.
T Consensus 28 l~VlV~nv~G~GdI~~V~Ik~~~~~~W---~~M~r------------n-Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 28 LVLDIKYTRPGDSLAEVELRQHGSEEW---EPLTK------------K-GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp EEEEEEEEBTTBCEEEEEEECTTCCCC---EECEE------------E-TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred EEEEEEEeCCCCCEEEEEEEeCCCCcE---eEccc------------c-CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 4566777664 36689996 66788 58976 2 45899765 1345788888887 5787664
No 54
>1qsd_A Protein (beta-tubulin binding post-chaperonin cofactor); four-helix-bundle, chaperone; 2.20A {Saccharomyces cerevisiae} SCOP: a.7.5.1
Probab=26.31 E-value=35 Score=28.50 Aligned_cols=65 Identities=15% Similarity=0.201 Sum_probs=49.4
Q ss_pred chhhhHHHHHhhhH---HHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccccccccch--HHHHHHHhhc
Q 015355 249 NQLEIDHLKFMLHQ---KEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKD--EELIAAEESL 313 (408)
Q Consensus 249 ~~~E~~~l~~m~~q---kele~~r~k~qie~~K~~lsvlq~k~~~ei~~AqkLl~eK~--~~LdaAe~aL 313 (408)
=+-+-++++.|-.. ++-++.+..+-+.+++.++--++.|...++.+-+.+|.... .++.+|++.|
T Consensus 27 ~~~q~~riek~k~~~~~dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~~l~~~~~~ee~~~Ake~l 96 (106)
T 1qsd_A 27 LKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREFKEDLEQFLKTYQGTEDVSDARSAI 96 (106)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 34455677777665 68899999999999999999999999999999888884222 3555555543
No 55
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=26.25 E-value=42 Score=26.88 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=28.5
Q ss_pred CCCCCCCChHHHhhhcchhHHHHHHhhhHHHHHHH
Q 015355 77 LSESHVPSMKELSAHGRDDLANIVRRRGYKFIRQL 111 (408)
Q Consensus 77 l~~~~~psmkels~hgr~dla~~vrrrgyk~i~~l 111 (408)
+|--|++++.+|++--+.+|+.+++ ..-++.+.+
T Consensus 44 iPk~H~~~l~dL~~~e~~~l~~~~~-~~~~~~~~~ 77 (119)
T 4egu_A 44 VPKKHYDSLIDIPDKEMDIVSHIHV-VINKIAKEK 77 (119)
T ss_dssp EESSCCSSGGGSCGGGTHHHHHHHH-HHHHHHHHH
T ss_pred EechhhCCHhHCCHhHHHHHHHHHH-HHHHHHHHh
Confidence 5888999999999988999999997 566666654
No 56
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=25.73 E-value=1.1e+02 Score=24.90 Aligned_cols=38 Identities=24% Similarity=0.333 Sum_probs=27.4
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 015355 251 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKA 288 (408)
Q Consensus 251 ~E~~~l~~m~~qkele~~r~k~qie~~K~~lsvlq~k~ 288 (408)
-||++|++=+.--|-|-.|-...+--||+.|+.||-..
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qL 63 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQV 63 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 47888887766666666666777888898887766443
No 57
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=25.62 E-value=23 Score=27.54 Aligned_cols=14 Identities=36% Similarity=0.781 Sum_probs=11.0
Q ss_pred EcCEeeeCCCCCee
Q 015355 382 VDGQWKVDPQRESV 395 (408)
Q Consensus 382 VDGeW~~DPd~Ptv 395 (408)
|||+|.+||.-.+.
T Consensus 44 vdgew~yd~atktf 57 (61)
T 1igd_A 44 VDGVWTYDDATKTF 57 (61)
T ss_dssp CCCEEEEETTTTEE
T ss_pred CCceEeecCceeEE
Confidence 68999999876653
No 58
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=24.30 E-value=17 Score=27.75 Aligned_cols=13 Identities=38% Similarity=0.920 Sum_probs=10.2
Q ss_pred EcCEeeeCCCCCe
Q 015355 382 VDGQWKVDPQRES 394 (408)
Q Consensus 382 VDGeW~~DPd~Pt 394 (408)
|||+|.+||.-.+
T Consensus 39 vdgeW~YD~ATkT 51 (56)
T 3fil_A 39 VDGEWTYDDATKT 51 (56)
T ss_dssp CCCEEEEEGGGTE
T ss_pred CccEEEecCceeE
Confidence 6899999886554
No 59
>1x2l_A CUT-like 2, homeobox protein CUX-2; CUT domain, human homeobox protein CUX-2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.7
Probab=23.87 E-value=68 Score=26.81 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=36.8
Q ss_pred CCCCCCCCcccccccccHHHHHHHHHHHHhhCCCCCCCCChHHHhhhcchhHHHHHHhhhHHHHHHHHhc
Q 015355 45 SSSSSSSSRSSRKVKSNEELYNDLREFLSTVGLSESHVPSMKELSAHGRDDLANIVRRRGYKFIRQLLKS 114 (408)
Q Consensus 45 ~~~~~~~~r~~~~v~~~~el~~~~~ef~~~~~l~~~~~psmkels~hgr~dla~~vrrrgyk~i~~l~~~ 114 (408)
++.++..|-..--.=+-.++|++|+|+|...+++|.. .|..|=+|.=..+.+||.+
T Consensus 3 ~~~~~~~p~~~~~~ldTk~I~~~ike~L~~~~isQ~~--------------FA~~VLgrsQgtlS~lL~~ 58 (101)
T 1x2l_A 3 SGSSGAGPGAEEEQLDTAEIAFQVKEQLLKHNIGQRV--------------FGHYVLGLSQGSVSEILAR 58 (101)
T ss_dssp CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHTTCCHHH--------------HHHHTTCSCHHHHHHHHHC
T ss_pred CCcccCCCCCCcCccCHHHHHHHHHHHHHHcCCCHHH--------------HHHHHHccccchHHHHhcC
Confidence 3344455555555667789999999999998877643 4555544444556666665
No 60
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=22.76 E-value=71 Score=26.08 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=28.0
Q ss_pred cHHHHHHHHHHHHhhCCCCC-CCCChHHHhhhcch
Q 015355 61 NEELYNDLREFLSTVGLSES-HVPSMKELSAHGRD 94 (408)
Q Consensus 61 ~~el~~~~~ef~~~~~l~~~-~~psmkels~hgr~ 94 (408)
-+.+++.|++.+..-.+|.| .+||..||.++=.+
T Consensus 15 ~~~i~~~i~~~I~~g~~~~g~~Lps~~~La~~~~v 49 (125)
T 3neu_A 15 YSQISDWMKKQMITGEWKGEDKLPSVREMGVKLAV 49 (125)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCCCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHCc
Confidence 46789999999999899877 58999999986433
No 61
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=20.39 E-value=68 Score=26.75 Aligned_cols=65 Identities=11% Similarity=0.238 Sum_probs=49.8
Q ss_pred hhhhHHHHHhhhH--HHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccccccc-----cchHHHHHHHhhcC
Q 015355 250 QLEIDHLKFMLHQ--KEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLIS-----DKDEELIAAEESLS 314 (408)
Q Consensus 250 ~~E~~~l~~m~~q--kele~~r~k~qie~~K~~lsvlq~k~~~ei~~AqkLl~-----eK~~~LdaAe~aLs 314 (408)
+-+-++++.|-.. ++-++.+..+-+.+++.++--.+.|...++.+-+.+|. +-..++.+|++.|.
T Consensus 31 ~~q~~riek~k~e~~Dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~~~Ake~l~ 102 (108)
T 1h7c_A 31 KQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLD 102 (108)
T ss_dssp HHHHHHHHHHHHHHCSCTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCGGGTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHH
Confidence 3445566666442 46688888999999999999999999999999999986 12257888887754
No 62
>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A
Probab=20.23 E-value=87 Score=25.61 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=41.6
Q ss_pred cccHHHHHHHHHHHHhhCCCC------CCCCChHHHhhhcchhHHH------HHHhhhHHHHHHHHhc
Q 015355 59 KSNEELYNDLREFLSTVGLSE------SHVPSMKELSAHGRDDLAN------IVRRRGYKFIRQLLKS 114 (408)
Q Consensus 59 ~~~~el~~~~~ef~~~~~l~~------~~~psmkels~hgr~dla~------~vrrrgyk~i~~l~~~ 114 (408)
-.+..+.+||.+||.+.||-. ++ ++.+|..-.-.||-+ -.||+-.+-|.+|...
T Consensus 12 ~~d~~~~~~V~~WL~sLrLhKY~~~F~~~--~~~~l~~LtdedL~~~GVta~GaRrKil~aI~~lr~~ 77 (88)
T 2d3d_A 12 LTDPKLLKNIPMWLKSLRLHKYSDALSGT--PWIELIYLDDETLEKKGVLALGARRKLLKAFGIVIDY 77 (88)
T ss_dssp HTCHHHHTCHHHHHHHTTCGGGHHHHTTS--CHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCccccccHHHHHHHcccchhHHHHhcC--CHHHHHHcCHHHHHHcCCccHhHHHHHHHHHHHHHHH
Confidence 467888999999999998863 32 777777777777754 3688889989888754
Done!