BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015359
(408 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5DQJ8|SIP5_PICGU Protein SIP5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS
566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=SIP5 PE=3 SV=2
Length = 433
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 22/78 (28%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKN-------------------PNT-- 92
D ECPICFLYYPS LN SRCC++ ICTECF+Q+K P+T
Sbjct: 211 DASECPICFLYYPSNLNISRCCLQPICTECFVQIKRLDPHPPHDDASNQPNGDSLPHTLI 270
Query: 93 TRPTQCPFCKTANYAVEY 110
+ P CP+C A++ V Y
Sbjct: 271 SEPAHCPYCAMADFGVIY 288
>sp|Q759M1|SIP5_ASHGO Protein SIP5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SIP5 PE=3 SV=2
Length = 476
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 32/111 (28%)
Query: 32 KLRKLILESKL----APCYPGDEDCCCDL----EECPICFLYYPS-LNRSRCCMKGICTE 82
K +L LE++ + C P D D DL ECPICFLY+P +N SRCC++ ICTE
Sbjct: 225 KFLELKLEARRTGVSSACLPSD-DAKWDLYRNGAECPICFLYFPEPMNVSRCCLQPICTE 283
Query: 83 CFLQM--------------------KNPN--TTRPTQCPFCKTANYAVEYR 111
CF+Q+ K+P+ + P CPFC T N+ V Y+
Sbjct: 284 CFVQIKRQEPHFSHDEVDPAQPDEDKDPDLLISTPASCPFCATPNFGVTYK 334
>sp|Q6CEU8|SIP5_YARLI Protein SIP5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SIP5 PE=3 SV=1
Length = 497
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 20/76 (26%)
Query: 55 DLEECPICFLYYP-SLNRSRCCMKGICTECFLQMKN-----------PNT--------TR 94
D ECPICFLYYP SLN +RCC + IC+ECF+QMK P+T +
Sbjct: 252 DPIECPICFLYYPNSLNMTRCCAQPICSECFVQMKRAEPHPRHDEPEPDTLLGQLDLISE 311
Query: 95 PTQCPFCKTANYAVEY 110
PT CP+C +++ V Y
Sbjct: 312 PTACPYCAMSDFGVVY 327
>sp|A7TL97|SIP5_VANPO Protein SIP5 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=SIP5 PE=3 SV=1
Length = 479
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 24/84 (28%)
Query: 58 ECPICFLYYP-SLNRSRCCMKGICTECFLQM---------------------KNPN--TT 93
ECPICFLYYP +LN S+CC + ICTECF+Q+ K+P+ +
Sbjct: 281 ECPICFLYYPKNLNYSKCCQQPICTECFVQIKRALPHFPHDDNEHNNEDDSEKDPHLLIS 340
Query: 94 RPTQCPFCKTANYAVEYRGVKTKE 117
P CP+C T N+ + Y + +++
Sbjct: 341 EPANCPYCATPNFTISYSPIASRK 364
>sp|B0YA45|SIP5_ASPFC Protein sip5 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=sip5 PE=3 SV=1
Length = 812
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 29/85 (34%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN---------------------- 91
D ECPICFLYYP LNR+RCC + IC+ECF+Q+K P+
Sbjct: 280 DATECPICFLYYPPYLNRTRCCDQPICSECFVQIKRPDPHPPEHGEAEPNAAAAEGDRQD 339
Query: 92 ------TTRPTQCPFCKTANYAVEY 110
+ P CPFC + V Y
Sbjct: 340 NQDCQLVSEPAACPFCVQPEFGVTY 364
>sp|Q4WCJ7|SIP5_ASPFU Protein sip5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=sip5 PE=3 SV=1
Length = 812
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 29/85 (34%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN---------------------- 91
D ECPICFLYYP LNR+RCC + IC+ECF+Q+K P+
Sbjct: 280 DATECPICFLYYPPYLNRTRCCDQPICSECFVQIKRPDPHPPEHGEAEPNAAAAEGDRQD 339
Query: 92 ------TTRPTQCPFCKTANYAVEY 110
+ P CPFC + V Y
Sbjct: 340 NQDCQLVSEPAACPFCVQPEFGVTY 364
>sp|A1DB29|SIP5_NEOFI Protein sip5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=sip5 PE=3 SV=1
Length = 812
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 29/85 (34%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN---------------------- 91
D ECPICFLYYP LNR+RCC + IC+ECF+Q+K P+
Sbjct: 280 DATECPICFLYYPPYLNRTRCCDQPICSECFVQIKRPDPHPPEHGEAEPNATAAEGDRQD 339
Query: 92 ------TTRPTQCPFCKTANYAVEY 110
+ P CPFC + V Y
Sbjct: 340 NQDCQLVSEPAACPFCVQPEFGVTY 364
>sp|Q1DZ34|SIP5_COCIM Protein SIP5 OS=Coccidioides immitis (strain RS) GN=SIP5 PE=3 SV=1
Length = 786
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 25/81 (30%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN---------------------- 91
D ECPICFLYYP LN++RCC + IC+ECF+Q+K P+
Sbjct: 277 DASECPICFLYYPPYLNKTRCCDQPICSECFVQIKRPDPHPPEHHDPNNSETTHPDEPEG 336
Query: 92 --TTRPTQCPFCKTANYAVEY 110
+ P CPFC + V Y
Sbjct: 337 QLVSEPAACPFCVQPEFGVMY 357
>sp|A6REV3|SIP5_AJECN Protein SIP5 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SIP5
PE=3 SV=2
Length = 824
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 24/77 (31%)
Query: 58 ECPICFLYYPS-LNRSRCCMKGICTECFLQMK------------NPNT-----------T 93
ECPICFLYYP LNR+RCC + IC+ECF+Q+K +PN+ +
Sbjct: 297 ECPICFLYYPPYLNRTRCCDQWICSECFVQIKRADPHLPEHEQRDPNSPSPDRPDGQLIS 356
Query: 94 RPTQCPFCKTANYAVEY 110
P CPFC ++ V Y
Sbjct: 357 EPAGCPFCVQPDFGVSY 373
>sp|P40210|SIP5_YEAST Protein SIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SIP5 PE=1 SV=1
Length = 489
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 26/86 (30%)
Query: 58 ECPICFLYYPS-LNRSRCCMKGICTECFLQM-----------------------KNPN-- 91
ECPICFLY+P N S+CC + ICTECF+Q+ K+PN
Sbjct: 270 ECPICFLYFPGPFNYSKCCQQPICTECFVQIKRADPHFPHDEVDPTEPQTNDSEKDPNLL 329
Query: 92 TTRPTQCPFCKTANYAVEYRGVKTKE 117
T+ P CP+C TA++++ Y+ +E
Sbjct: 330 TSEPANCPYCATASFSITYQPPTNRE 355
>sp|A6ZMK0|SIP5_YEAS7 Protein SIP5 OS=Saccharomyces cerevisiae (strain YJM789) GN=SIP5
PE=3 SV=1
Length = 489
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 26/86 (30%)
Query: 58 ECPICFLYYPS-LNRSRCCMKGICTECFLQM-----------------------KNPN-- 91
ECPICFLY+P N S+CC + ICTECF+Q+ K+PN
Sbjct: 270 ECPICFLYFPGPFNYSKCCQQPICTECFVQIKRADPHFPHDEVDPTEPQTNDSEKDPNLL 329
Query: 92 TTRPTQCPFCKTANYAVEYRGVKTKE 117
T+ P CP+C TA++++ Y+ +E
Sbjct: 330 TSEPANCPYCATASFSITYQPPTNRE 355
>sp|Q2TZ06|SIP5_ASPOR Protein sip5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=sip5 PE=3 SV=1
Length = 819
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 31/87 (35%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN---------------------- 91
D ECPICFLYYP LNR+RCC + IC+ECF+Q+K P+
Sbjct: 280 DAAECPICFLYYPPYLNRTRCCDQPICSECFVQIKRPDPHPPEHGDSDPNAPAAAAEGDA 339
Query: 92 --------TTRPTQCPFCKTANYAVEY 110
+ P CPFC + V Y
Sbjct: 340 ADNQDSQLVSEPAACPFCVQPEFGVTY 366
>sp|Q0UJC3|SIP5_PHANO Protein SIP5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574
/ FGSC 10173) GN=SIP5 PE=3 SV=3
Length = 854
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 24/80 (30%)
Query: 55 DLEECPICFLYYP-SLNRSRCCMKGICTECFLQMKNPN---------------------- 91
+ EECPICF++YP LN++RCC + IC+ECF+Q+K P+
Sbjct: 291 NAEECPICFMFYPPHLNKTRCCDQPICSECFVQIKRPDPHPPEHHGDAETPAPEPQEESQ 350
Query: 92 -TTRPTQCPFCKTANYAVEY 110
+ P CPFC + V Y
Sbjct: 351 LVSEPAACPFCVQPEFGVTY 370
>sp|A1C3V7|SIP5_ASPCL Protein sip5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65
/ DSM 816 / NCTC 3887 / NRRL 1) GN=sip5 PE=3 SV=1
Length = 815
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 31/87 (35%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNP---------------NTTR---- 94
D ECPICFLYYP LNR+RCC + IC+ECF+Q+K P N+T
Sbjct: 280 DATECPICFLYYPPYLNRTRCCDQPICSECFVQIKRPDPHPPEHGETDSNAANSTSDRDR 339
Query: 95 -----------PTQCPFCKTANYAVEY 110
P CPFC + V Y
Sbjct: 340 QESQDGQLVSGPAACPFCVQPEFGVTY 366
>sp|Q5BDG0|SIP5_EMENI Protein sip5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=sip5 PE=3 SV=1
Length = 821
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 31/87 (35%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN---------------------- 91
D ECPICFLYYP LNR+RCC + IC+ECF+Q+K P+
Sbjct: 286 DAIECPICFLYYPPYLNRTRCCDQPICSECFVQIKRPDPHPPEHADSDSNAPNPAGETER 345
Query: 92 --------TTRPTQCPFCKTANYAVEY 110
+ P CPFC + V Y
Sbjct: 346 QDVQDIQLVSEPAACPFCVQPEFGVAY 372
>sp|Q5AA26|SIP5_CANAL Protein SIP5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SIP5 PE=3 SV=1
Length = 513
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 21/74 (28%)
Query: 58 ECPICFLYYPS-LNRSRCCMKGICTECFLQMK--NPN------------------TTRPT 96
ECPICFLYYP LN SRCC++ IC+ECF+Q+K +P+ + P
Sbjct: 239 ECPICFLYYPKHLNISRCCLQPICSECFVQIKRLDPHPPHDDQSNQEAGELPHRLISEPA 298
Query: 97 QCPFCKTANYAVEY 110
CP+C + ++ V Y
Sbjct: 299 NCPYCASPDFGVTY 312
>sp|Q0D205|SIP5_ASPTN Protein sip5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=sip5 PE=3 SV=2
Length = 797
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 31/84 (36%)
Query: 58 ECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN------------------------- 91
ECPICFLYYP LNR+RCC + IC+ECF+Q+K P+
Sbjct: 280 ECPICFLYYPPYLNRTRCCDQPICSECFVQIKRPDPHPPEHGDADSNAPAESQEGERPEN 339
Query: 92 -----TTRPTQCPFCKTANYAVEY 110
P CPFC + V Y
Sbjct: 340 QDGQLVMEPAACPFCVQPEFGVTY 363
>sp|O74775|SIP5_SCHPO Protein sip5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sip5 PE=1 SV=1
Length = 554
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 58 ECPICFLYYPS-LNRSRCCMKGICTECFLQMK--------------NPN----TTRPTQC 98
ECPICFLYYPS N +RCC + IC+ECF++++ PN + P +C
Sbjct: 150 ECPICFLYYPSNFNYTRCCAQPICSECFVEIRRAEPHLPTVHANEPTPNEFDLISEPAKC 209
Query: 99 PFCKTANYAVEYR 111
P+C T + V Y+
Sbjct: 210 PYCMTERFGVIYK 222
>sp|Q6FR54|SIP5_CANGA Protein SIP5 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=SIP5 PE=3 SV=1
Length = 469
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 26/79 (32%)
Query: 58 ECPICFLYYP-SLNRSRCCMKGICTECFLQM-----------------------KNPN-- 91
ECPICFLY P LN S+CC + IC+ECF+Q+ K+PN
Sbjct: 264 ECPICFLYLPMPLNYSKCCQQPICSECFVQIKRSEPHFPHDEVDPSQPQKDENEKDPNLL 323
Query: 92 TTRPTQCPFCKTANYAVEY 110
+ P CP+C T N+++ Y
Sbjct: 324 ISEPANCPYCATPNFSITY 342
>sp|Q7S6X4|SIP5_NEUCR Protein sip-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=sip-5 PE=3 SV=1
Length = 857
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 24/77 (31%)
Query: 58 ECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN-----------------------TT 93
ECPICFL YP LN +RCC + IC+ECF+Q+K P+ +
Sbjct: 281 ECPICFLTYPPYLNHTRCCDQPICSECFVQIKRPDPHFPEGHNENDPNNNPEESAGLLVS 340
Query: 94 RPTQCPFCKTANYAVEY 110
P CP+C ++ V Y
Sbjct: 341 EPACCPYCTQPDFGVTY 357
>sp|A4RGE6|SIP5_MAGO7 Protein SIP5 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 /
FGSC 8958) GN=SIP5 PE=3 SV=1
Length = 819
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 25/81 (30%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNP------------NTTRPTQ---- 97
D ECPICFLYYP LN +RCC + IC+ECF+Q+K N+ RP +
Sbjct: 275 DGSECPICFLYYPPYLNHTRCCDQPICSECFVQIKRADPHYPDGHGDAQNSERPPEEQAG 334
Query: 98 --------CPFCKTANYAVEY 110
CP+C+ V Y
Sbjct: 335 LLISEPACCPYCQQPELGVTY 355
>sp|A6RHW0|SIP5_BOTFB Protein sip5 OS=Botryotinia fuckeliana (strain B05.10) GN=sip5 PE=3
SV=1
Length = 848
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 24/80 (30%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN---------------------- 91
D EC IC ++YP LNR+RCC + IC+ECF+Q+K P+
Sbjct: 275 DAVECSICLIFYPPYLNRTRCCDQSICSECFVQIKRPDPHTPEHHGPPQPAPDQAEDTEM 334
Query: 92 -TTRPTQCPFCKTANYAVEY 110
+ P CP+C+ + V Y
Sbjct: 335 LVSEPAACPYCQRPEFGVTY 354
>sp|Q2GTG9|SIP5_CHAGB Protein SIP5 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51
/ DSM 1962 / NBRC 6347 / NRRL 1970) GN=SIP5 PE=3 SV=1
Length = 887
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 24/77 (31%)
Query: 58 ECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN-----------------------TT 93
ECPICFL +P LN +RCC + IC+ECF+Q+K P+ +
Sbjct: 277 ECPICFLTFPPYLNHTRCCDQPICSECFVQIKRPDPHFPEGHNENDPNHNPEETAGLLVS 336
Query: 94 RPTQCPFCKTANYAVEY 110
P CP+C ++ V Y
Sbjct: 337 EPACCPYCTQPDFGVTY 353
>sp|A7EHE5|SIP5_SCLS1 Protein sip5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980
/ Ss-1) GN=sip5 PE=3 SV=1
Length = 862
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 24/80 (30%)
Query: 55 DLEECPICFLYYPS-LNRSRCCMKGICTECFLQMKNPN---------------------- 91
D EC IC ++YP LNR+RCC + IC+ECF+Q+K P
Sbjct: 279 DAVECSICLIWYPPYLNRTRCCDQSICSECFVQIKRPEPHTPEHHGPPPIASENAEDTEM 338
Query: 92 -TTRPTQCPFCKTANYAVEY 110
+ P CP+C+ + V Y
Sbjct: 339 LVSEPAACPYCQRPEFGVTY 358
>sp|P22276|RPC2_YEAST DNA-directed RNA polymerase III subunit RPC2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RET1 PE=1
SV=2
Length = 1149
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 12 VDEKYTRPQGLYVHKDVDIKKLRKLILESKLAPCYPGDEDCCCDLEECPI 61
VD +YTR + + +HKDV+I ++ ++L S Y DE L ECP+
Sbjct: 131 VDIEYTRGRNIIMHKDVEIGRM-PIMLRSNKCILYDADESKMAKLNECPL 179
>sp|Q7VKM9|MEND_HAEDU 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate
synthase OS=Haemophilus ducreyi (strain 35000HP / ATCC
700724) GN=menD PE=3 SV=1
Length = 569
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 251 STMAPIAGSSSSPSGGLACAIAALAERQQVSGESSINH----------GGNMSSFNMFPG 300
+TMA IA +S P+ G+ I+AL + +S S INH GG + F+M P
Sbjct: 433 ATMAGIAKASGQPTVGVVGDISALHDLNSISLLSKINHPSILFVINNSGGAI--FDMLPV 490
Query: 301 SSRL---YNRMDHDVE 313
+R+ + R+ H+ E
Sbjct: 491 EARVKEQFYRLSHNYE 506
>sp|Q54IV4|Y8495_DICDI SET and MYND domain-containing protein DDB_G0288495
OS=Dictyostelium discoideum GN=DDB_G0288495 PE=2 SV=1
Length = 532
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 77 KGICTECFLQMKNPNTTRPTQCPFCKTANYAVEYRGVKTKEEKGMEQIEEQRVIEAKIRI 136
+ ICT CF + N CP C NY Y +K E ++E + + + +
Sbjct: 67 RNICTTCFKILLESNRHNFQTCPSCFQVNYCSNYCKQYSKIETKHTELECKWIQDFTVSF 126
Query: 137 RQQELQDDEERML 149
+ Q +DD +L
Sbjct: 127 KHQMAEDDRNIVL 139
>sp|Q3UIW5|RNF10_MOUSE RING finger protein 10 OS=Mus musculus GN=Rnf10 PE=2 SV=2
Length = 804
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 52 CCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKTANYAVEYR 111
C ++ CPIC LY P+ + C C C L + + ++CP C ++ + + +
Sbjct: 218 CSHEVPSCPIC-LYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLK 276
Query: 112 GVKTKEEK 119
V E +
Sbjct: 277 SVVATESR 284
>sp|Q08E13|RNF10_BOVIN RING finger protein 10 OS=Bos taurus GN=RNF10 PE=2 SV=1
Length = 810
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 52 CCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKTANYAVEYR 111
C ++ CPIC LY P+ + C C C L + + ++CP C ++ + + +
Sbjct: 218 CSHEVPSCPIC-LYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLK 276
Query: 112 GVKTKEEK 119
V E +
Sbjct: 277 SVVATESR 284
>sp|Q5XI59|RNF10_RAT RING finger protein 10 OS=Rattus norvegicus GN=Rnf10 PE=2 SV=1
Length = 802
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 52 CCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKTANYAVEYR 111
C ++ CPIC LY P+ + C C C L + + ++CP C ++ + + +
Sbjct: 218 CSHEVPSCPIC-LYPPTAAKITRCGHIFCWACILHYLSLSERTWSKCPICYSSVHKKDLK 276
Query: 112 GVKTKEEK 119
V E +
Sbjct: 277 SVVATESR 284
>sp|Q8N5U6|RNF10_HUMAN RING finger protein 10 OS=Homo sapiens GN=RNF10 PE=1 SV=2
Length = 811
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 52 CCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKTANYAVEYR 111
C ++ CPIC LY P+ + C C C L + + ++CP C ++ + + +
Sbjct: 218 CSHEVPSCPIC-LYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLK 276
Query: 112 GVKTKE 117
V E
Sbjct: 277 SVVATE 282
>sp|Q6FPF1|VPS10_CANGA Vacuolar protein sorting/targeting protein 10 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=VPS10 PE=3 SV=1
Length = 1514
Score = 34.3 bits (77), Expect = 1.6, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 11/135 (8%)
Query: 204 EFDLDLEDIMVMEAIWLSIQENGRQRNPTYEEAAPSEQYVTEDRYVSSTMAPIAGSSSSP 263
EF D + + V++ WLS N P+ + P+ + + ++ + PI S S
Sbjct: 601 EFIKDSKGVCVVDEKWLSATGNC----PSTDIKKPAMRLIADN--MCKKELPIQSKSVSC 654
Query: 264 SGGLACAIAALAERQQVSGESSINHGGNMSSFNMFPGSSRLYNRMDHDVENYAPAESLIN 323
+ ++ + + G ++FN F G R Y D D + ESLI
Sbjct: 655 KNKNPSDPKDIPKKPKEGDRPTFGTGDIQATFNTFKGKVRFYQYFDTDED-----ESLIL 709
Query: 324 TSPDGRMTVARDEGE 338
+ +G ++ D G+
Sbjct: 710 ATSEGEAYISHDSGQ 724
>sp|B8CJM7|GLYA_SHEPW Serine hydroxymethyltransferase OS=Shewanella piezotolerans (strain
WP3 / JCM 13877) GN=glyA PE=3 SV=1
Length = 418
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 222 IQENGRQRNPTYEEAAPSEQY--------VTEDRYVS-------STMAPIAGSSSSPSGG 266
I+ G Q Y E P ++Y + E+ +S +T A + S S +
Sbjct: 44 IEAQGTQLTNKYAEGYPGKRYYGGCEHVDIVEELAISRAKELFGATYANVQPHSGSQAN- 102
Query: 267 LACAIAALAERQQVSGESSINHGGNMSSFNMFPGSSRLYNRMDHDVE------NYAPAES 320
A AL E S+ HGG+++ + S +LYN + + ++ +YA E
Sbjct: 103 -AAVFMALLEGGDTVLGMSLAHGGHLTHGSHVSFSGKLYNAVQYGIDESTGKIDYAEVER 161
Query: 321 L-INTSPDGRMTVARDEG-----EWGIDRGSELAEAGTSYASSDMAEDGGGISS 368
L + P +M +A +WG R E+A+ +Y DMA G +++
Sbjct: 162 LAVEHKP--KMIIAGFSAYSGIVDWGKFR--EIADKVGAYLFVDMAHVAGLVAA 211
>sp|Q6NRD3|SH3R1_XENLA E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis GN=sh3rf1 PE=2
SV=1
Length = 826
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 49 DEDCCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKT 103
DE DL ECP+C + + C C C L + ++ + +CP C+T
Sbjct: 2 DESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIV--SSRKELRCPECRT 54
>sp|B1KJJ9|GLYA_SHEWM Serine hydroxymethyltransferase OS=Shewanella woodyi (strain ATCC
51908 / MS32) GN=glyA PE=3 SV=1
Length = 418
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 222 IQENGRQRNPTYEEAAPSEQY--------VTEDRYVS-------STMAPIAGSSSSPSGG 266
++ G Q Y E P ++Y + E+ +S +T A + S S +
Sbjct: 44 LEAQGSQLTNKYAEGYPGKRYYGGCEHVDIAEELAISRAKELFGATYANVQPHSGSQAN- 102
Query: 267 LACAIAALAERQQVSGESSINHGGNMSSFNMFPGSSRLYNRMDHDVE------NYAPAES 320
A AL E S+ HGG+++ + S +LYN + + ++ +YA E
Sbjct: 103 -AAVFMALLEGGDTVLGMSLAHGGHLTHGSHVSFSGKLYNSVQYGIDETTGKIDYAEVER 161
Query: 321 L-INTSPDGRMTVARDEG-----EWGIDRGSELAEAGTSYASSDMAEDGGGISS 368
L + P +M +A +WG R E+A+ +Y DMA G I++
Sbjct: 162 LAVEHKP--KMIIAGFSAYSGIIDWGKFR--EIADKVGAYLFVDMAHVAGLIAA 211
>sp|Q5RBR0|SH3R1_PONAB E3 ubiquitin-protein ligase SH3RF1 OS=Pongo abelii GN=SH3RF1 PE=2
SV=1
Length = 888
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 49 DEDCCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKT 103
DE DL ECP+C + + C C C L + + +CP C+T
Sbjct: 2 DESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIV--GSRNELRCPECRT 54
>sp|Q7Z6J0|SH3R1_HUMAN E3 ubiquitin-protein ligase SH3RF1 OS=Homo sapiens GN=SH3RF1 PE=1
SV=2
Length = 888
Score = 32.3 bits (72), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 49 DEDCCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKT 103
DE DL ECP+C + + C C C L + + +CP C+T
Sbjct: 2 DESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIV--GSRNELRCPECRT 54
>sp|Q5ZLS3|BRE1A_CHICK E3 ubiquitin-protein ligase BRE1A OS=Gallus gallus GN=RNF20 PE=2
SV=1
Length = 984
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 10 QVVDEKYTRPQGLYVHK--DVDIKKLRKLILESKLAPCYPG-DEDCCCDLEE------CP 60
++V+ + TR + ++ K + DI +LR+ + +K P DE ++++ CP
Sbjct: 873 EIVESRVTREKEMFNFKRAEEDISRLRRKLETTKKPDMVPNCDEILMEEIKDYKARLTCP 932
Query: 61 ICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKTANYAVEYRGV 113
C + ++C C EC +K TR +CP C A A ++ +
Sbjct: 933 CCNMRKKDAVLTKC-FHVFCFEC---VKTRYDTRQRKCPKCNAAFGANDFHRI 981
>sp|Q28E95|SH3R1_XENTR E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus tropicalis GN=sh3rf1
PE=2 SV=1
Length = 861
Score = 32.3 bits (72), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 49 DEDCCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKT 103
DE DL ECP+C + + C C C L + ++ +CP C+T
Sbjct: 2 DESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIV--SSRNELRCPECRT 54
>sp|A5D7F8|SH3R1_BOVIN E3 ubiquitin-protein ligase SH3RF1 OS=Bos taurus GN=SH3RF1 PE=2
SV=1
Length = 840
Score = 32.3 bits (72), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 49 DEDCCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKT 103
DE DL ECP+C + + C C C L + + +CP C+T
Sbjct: 2 DESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIV--GSRNELRCPECRT 54
>sp|Q69ZI1|SH3R1_MOUSE E3 ubiquitin-protein ligase SH3RF1 OS=Mus musculus GN=Sh3rf1 PE=1
SV=2
Length = 892
Score = 32.0 bits (71), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 49 DEDCCCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKT 103
DE DL ECP+C + + C C C L + + +CP C+T
Sbjct: 2 DESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIV--GSRNELRCPECRT 54
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,478,273
Number of Sequences: 539616
Number of extensions: 6753027
Number of successful extensions: 18583
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 18308
Number of HSP's gapped (non-prelim): 313
length of query: 408
length of database: 191,569,459
effective HSP length: 120
effective length of query: 288
effective length of database: 126,815,539
effective search space: 36522875232
effective search space used: 36522875232
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)