Query 015363
Match_columns 408
No_of_seqs 451 out of 1529
Neff 11.5
Searched_HMMs 29240
Date Mon Mar 25 11:18:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015363.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015363hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 3E-40 1E-44 287.1 35.9 264 31-390 9-277 (304)
2 3ow8_A WD repeat-containing pr 100.0 1.7E-40 5.7E-45 290.6 33.2 281 31-407 28-317 (321)
3 1vyh_C Platelet-activating fac 100.0 2.7E-40 9.4E-45 299.4 34.0 281 30-408 103-408 (410)
4 1got_B GT-beta; complex (GTP-b 100.0 3.4E-38 1.2E-42 278.6 36.4 280 31-407 51-339 (340)
5 3dw8_B Serine/threonine-protei 100.0 9.9E-39 3.4E-43 293.1 33.5 326 11-387 6-331 (447)
6 4gqb_B Methylosome protein 50; 100.0 3.8E-38 1.3E-42 277.7 30.9 249 31-371 78-331 (344)
7 2pbi_B Guanine nucleotide-bind 100.0 4.5E-37 1.5E-41 272.7 35.4 282 30-407 59-353 (354)
8 4ery_A WD repeat-containing pr 100.0 7.5E-37 2.6E-41 266.9 35.9 283 31-407 19-308 (312)
9 1vyh_C Platelet-activating fac 100.0 7.6E-38 2.6E-42 283.3 29.9 244 30-370 145-410 (410)
10 3frx_A Guanine nucleotide-bind 100.0 4.2E-37 1.4E-41 269.1 33.5 256 30-380 12-275 (319)
11 2pm7_B Protein transport prote 100.0 1.8E-37 6.1E-42 268.7 30.7 261 32-373 6-287 (297)
12 4g56_B MGC81050 protein; prote 100.0 4.2E-38 1.4E-42 279.6 27.2 287 32-407 39-339 (357)
13 3ow8_A WD repeat-containing pr 100.0 2E-37 6.8E-42 271.1 30.8 243 31-370 76-320 (321)
14 1erj_A Transcriptional repress 100.0 5.3E-37 1.8E-41 276.4 34.1 291 32-391 61-360 (393)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 3E-37 1E-41 273.0 29.7 271 32-379 58-342 (345)
16 4gqb_B Methylosome protein 50; 100.0 2E-37 6.9E-42 273.1 27.8 293 32-407 27-327 (344)
17 2xzm_R RACK1; ribosome, transl 100.0 3.8E-36 1.3E-40 265.9 35.8 257 31-377 17-290 (343)
18 4g56_B MGC81050 protein; prote 100.0 4.9E-37 1.7E-41 272.7 29.0 256 31-377 90-349 (357)
19 3bg1_A Protein SEC13 homolog; 100.0 1.8E-37 6E-42 271.1 25.6 261 31-373 9-295 (316)
20 1nr0_A Actin interacting prote 100.0 1E-36 3.6E-41 289.9 32.8 287 30-395 54-379 (611)
21 3iz6_a 40S ribosomal protein R 100.0 3.1E-37 1.1E-41 276.7 27.6 292 31-407 62-371 (380)
22 1got_B GT-beta; complex (GTP-b 100.0 2.4E-36 8.2E-41 266.8 32.6 245 32-368 94-340 (340)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-36 4.5E-41 269.0 30.4 302 32-407 12-331 (345)
24 4e54_B DNA damage-binding prot 100.0 2E-37 6.9E-42 283.1 25.9 269 32-375 116-433 (435)
25 4aow_A Guanine nucleotide-bind 100.0 2.3E-34 7.7E-39 254.3 35.9 284 31-407 34-333 (340)
26 2ynn_A Coatomer subunit beta'; 100.0 4.2E-35 1.4E-39 254.7 30.3 245 31-371 51-302 (304)
27 1erj_A Transcriptional repress 100.0 3.4E-35 1.2E-39 264.6 29.9 253 36-371 124-389 (393)
28 2pbi_B Guanine nucleotide-bind 100.0 9.8E-35 3.4E-39 257.7 31.8 248 32-368 103-354 (354)
29 3iz6_a 40S ribosomal protein R 100.0 1.7E-35 5.9E-40 265.3 26.3 269 31-371 104-375 (380)
30 2hes_X YDR267CP; beta-propelle 100.0 1.6E-34 5.3E-39 254.0 31.7 271 31-390 10-302 (330)
31 3frx_A Guanine nucleotide-bind 100.0 1.2E-34 4E-39 253.6 30.7 272 14-371 42-317 (319)
32 3dm0_A Maltose-binding peripla 100.0 2E-34 6.9E-39 278.6 34.9 261 31-382 378-642 (694)
33 2hes_X YDR267CP; beta-propelle 100.0 7.9E-35 2.7E-39 255.9 29.0 257 33-371 56-328 (330)
34 1nr0_A Actin interacting prote 100.0 1.3E-34 4.6E-39 275.4 32.6 255 32-380 15-278 (611)
35 3zwl_B Eukaryotic translation 100.0 1.1E-33 3.8E-38 252.5 36.6 276 30-398 27-330 (369)
36 3jrp_A Fusion protein of prote 100.0 1.7E-34 5.6E-39 258.9 30.7 261 31-371 7-287 (379)
37 2xzm_R RACK1; ribosome, transl 100.0 2.5E-34 8.5E-39 254.3 30.3 267 31-371 72-340 (343)
38 1k8k_C P40, ARP2/3 complex 41 100.0 5.8E-34 2E-38 254.8 32.7 251 33-371 6-274 (372)
39 2ymu_A WD-40 repeat protein; u 100.0 5.6E-34 1.9E-38 270.0 34.4 273 31-407 299-576 (577)
40 3f3f_A Nucleoporin SEH1; struc 100.0 7E-34 2.4E-38 251.7 32.5 283 32-380 8-345 (351)
41 3ei3_B DNA damage-binding prot 100.0 5.9E-34 2E-38 256.0 31.0 291 32-407 70-378 (383)
42 3dwl_C Actin-related protein 2 100.0 1.3E-34 4.4E-39 259.7 22.2 252 34-370 10-280 (377)
43 4ery_A WD repeat-containing pr 100.0 2.4E-33 8.2E-38 244.8 29.6 244 31-370 61-311 (312)
44 1gxr_A ESG1, transducin-like e 100.0 1.4E-32 4.7E-37 242.4 34.4 270 31-397 47-320 (337)
45 1sq9_A Antiviral protein SKI8; 100.0 7.7E-33 2.6E-37 249.8 33.0 280 31-380 12-330 (397)
46 4h5i_A Guanine nucleotide-exch 100.0 1.7E-33 5.7E-38 250.6 27.0 201 113-371 134-343 (365)
47 2ymu_A WD-40 repeat protein; u 100.0 1.5E-32 5.1E-37 260.2 35.0 273 31-407 258-535 (577)
48 3gre_A Serine/threonine-protei 100.0 1.3E-33 4.3E-38 258.3 26.4 278 32-382 60-369 (437)
49 4a11_B DNA excision repair pro 100.0 1.5E-32 5.2E-37 248.6 32.8 287 31-382 39-375 (408)
50 2pm9_A Protein WEB1, protein t 100.0 2.9E-33 1E-37 254.2 26.9 272 13-372 46-338 (416)
51 1yfq_A Cell cycle arrest prote 100.0 1.3E-32 4.5E-37 243.2 29.8 281 33-390 9-301 (342)
52 3mkq_A Coatomer beta'-subunit; 100.0 2.5E-32 8.6E-37 269.0 34.2 264 31-390 9-277 (814)
53 1r5m_A SIR4-interacting protei 100.0 3.1E-32 1.1E-36 247.9 31.0 279 34-398 107-409 (425)
54 3odt_A Protein DOA1; ubiquitin 100.0 7.4E-32 2.5E-36 235.2 31.8 266 31-403 14-286 (313)
55 2pm9_A Protein WEB1, protein t 100.0 1.2E-32 4E-37 250.2 27.7 294 32-407 9-333 (416)
56 3jro_A Fusion protein of prote 100.0 7.5E-33 2.6E-37 269.1 26.9 261 31-372 5-286 (753)
57 1gxr_A ESG1, transducin-like e 100.0 1.3E-31 4.5E-36 236.1 32.3 240 33-370 95-336 (337)
58 3v7d_B Cell division control p 100.0 1.1E-31 3.7E-36 247.5 32.9 275 31-390 158-440 (464)
59 3i2n_A WD repeat-containing pr 100.0 1.7E-32 5.8E-37 243.9 26.1 286 13-371 45-353 (357)
60 3k26_A Polycomb protein EED; W 100.0 7.7E-33 2.6E-37 246.9 22.9 263 34-370 68-365 (366)
61 3dm0_A Maltose-binding peripla 100.0 6.6E-32 2.3E-36 260.9 30.4 256 31-370 426-692 (694)
62 3k26_A Polycomb protein EED; W 100.0 5.5E-32 1.9E-36 241.3 26.8 294 33-398 16-350 (366)
63 4gga_A P55CDC, cell division c 100.0 3E-31 1E-35 241.1 32.1 257 32-385 144-408 (420)
64 3vl1_A 26S proteasome regulato 100.0 1.1E-31 3.6E-36 244.3 29.2 264 32-371 136-419 (420)
65 3vl1_A 26S proteasome regulato 100.0 1.3E-31 4.6E-36 243.6 29.7 268 36-398 57-349 (420)
66 3i2n_A WD repeat-containing pr 100.0 8.4E-32 2.9E-36 239.4 27.6 287 32-407 15-349 (357)
67 4gga_A P55CDC, cell division c 100.0 4.9E-31 1.7E-35 239.7 32.6 275 38-407 108-391 (420)
68 1r5m_A SIR4-interacting protei 100.0 1.7E-31 5.9E-36 243.0 28.9 285 30-399 40-346 (425)
69 4aez_A CDC20, WD repeat-contai 100.0 2.6E-31 8.9E-36 240.1 29.2 248 33-379 132-387 (401)
70 1k8k_C P40, ARP2/3 complex 41 100.0 7.8E-32 2.7E-36 241.0 25.3 266 31-372 48-362 (372)
71 1sq9_A Antiviral protein SKI8; 100.0 1E-31 3.5E-36 242.5 25.8 275 30-371 57-395 (397)
72 2j04_B YDR362CP, TAU91; beta p 100.0 9.8E-33 3.3E-37 255.1 18.7 258 31-371 129-428 (524)
73 2j04_B YDR362CP, TAU91; beta p 100.0 1E-31 3.4E-36 248.4 24.5 269 32-371 204-517 (524)
74 3ei3_B DNA damage-binding prot 100.0 2E-31 7E-36 239.4 25.5 253 33-371 116-382 (383)
75 4aow_A Guanine nucleotide-bind 100.0 1.7E-30 5.7E-35 229.4 30.9 272 13-371 62-337 (340)
76 3odt_A Protein DOA1; ubiquitin 100.0 1.4E-30 4.7E-35 227.1 29.9 262 14-380 41-304 (313)
77 3mmy_A MRNA export factor; mRN 100.0 1.8E-30 6E-35 231.7 31.1 285 31-398 35-330 (368)
78 2xyi_A Probable histone-bindin 100.0 4E-31 1.4E-35 241.0 27.3 274 30-371 123-410 (430)
79 1pgu_A Actin interacting prote 100.0 2.7E-30 9.3E-35 246.5 33.1 259 31-382 14-293 (615)
80 4ggc_A P55CDC, cell division c 100.0 5.8E-30 2E-34 223.8 32.0 275 38-407 28-311 (318)
81 3sfz_A APAF-1, apoptotic pepti 100.0 2.9E-30 9.8E-35 265.4 34.5 251 31-369 611-911 (1249)
82 3dwl_C Actin-related protein 2 100.0 2.3E-31 8E-36 238.5 22.8 283 13-369 34-377 (377)
83 4aez_A CDC20, WD repeat-contai 100.0 2.7E-30 9.3E-35 233.4 29.9 260 38-398 96-364 (401)
84 2aq5_A Coronin-1A; WD40 repeat 100.0 5.5E-31 1.9E-35 238.1 25.1 257 30-371 76-342 (402)
85 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.4E-30 1.5E-34 235.6 30.3 225 113-382 103-354 (450)
86 3v7d_B Cell division control p 100.0 1.2E-29 4E-34 233.9 32.3 269 30-398 116-406 (464)
87 3zwl_B Eukaryotic translation 100.0 7.5E-30 2.6E-34 227.7 28.9 259 31-380 70-354 (369)
88 2pm7_B Protein transport prote 100.0 8.9E-30 3E-34 220.3 26.8 242 113-407 10-281 (297)
89 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-29 5E-34 260.2 33.0 295 31-400 653-1061(1249)
90 1p22_A F-BOX/WD-repeat protein 100.0 3E-29 1E-33 229.1 31.4 252 33-391 131-393 (435)
91 3gre_A Serine/threonine-protei 100.0 6E-30 2E-34 234.0 26.0 273 32-368 108-437 (437)
92 4ggc_A P55CDC, cell division c 100.0 4.9E-29 1.7E-33 217.9 30.6 244 32-371 64-315 (318)
93 4gq1_A NUP37; propeller, trans 100.0 1.2E-30 4E-35 234.9 19.5 258 38-370 92-388 (393)
94 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-29 4.2E-34 229.3 26.4 265 38-391 37-321 (402)
95 2oaj_A Protein SNI1; WD40 repe 100.0 1.5E-29 5.3E-34 249.3 27.4 167 197-383 449-675 (902)
96 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-29 3.9E-34 229.4 22.7 268 34-370 14-296 (588)
97 1pgu_A Actin interacting prote 100.0 1.1E-28 3.9E-33 235.3 30.3 272 30-391 58-347 (615)
98 4e54_B DNA damage-binding prot 100.0 8.4E-30 2.9E-34 232.6 21.3 214 113-383 120-338 (435)
99 3lrv_A PRE-mRNA-splicing facto 100.0 6.3E-29 2.2E-33 219.6 25.2 235 42-373 43-294 (343)
100 3mkq_A Coatomer beta'-subunit; 100.0 1.5E-28 5.2E-33 242.1 30.6 245 31-371 51-302 (814)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.3E-27 4.3E-32 219.1 34.3 261 32-399 156-423 (445)
102 3bg1_A Protein SEC13 homolog; 100.0 1.1E-28 3.7E-33 215.4 25.7 225 31-314 53-293 (316)
103 1yfq_A Cell cycle arrest prote 100.0 4.3E-29 1.5E-33 220.6 23.0 263 14-369 35-322 (342)
104 3dw8_B Serine/threonine-protei 100.0 1.1E-28 3.7E-33 226.2 26.4 283 36-370 94-445 (447)
105 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-27 4E-32 219.3 32.5 243 30-382 113-358 (445)
106 3vu4_A KMHSV2; beta-propeller 100.0 3.8E-28 1.3E-32 215.4 28.0 286 32-371 16-336 (355)
107 3mmy_A MRNA export factor; mRN 100.0 6.3E-29 2.2E-33 221.6 22.7 259 14-369 66-344 (368)
108 4h5i_A Guanine nucleotide-exch 100.0 1.3E-28 4.4E-33 219.1 24.5 206 34-315 132-344 (365)
109 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-28 4.3E-33 242.8 26.7 266 32-369 14-310 (902)
110 1p22_A F-BOX/WD-repeat protein 100.0 2.6E-28 8.8E-33 222.9 24.1 242 31-372 169-415 (435)
111 3jrp_A Fusion protein of prote 100.0 8.1E-28 2.8E-32 215.4 24.8 240 93-398 4-271 (379)
112 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.3E-27 7.8E-32 217.5 28.0 252 33-372 100-392 (450)
113 2w18_A PALB2, fancn, partner a 100.0 1.2E-27 4.2E-32 203.2 23.8 235 34-369 110-355 (356)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-27 5.2E-32 215.6 24.0 251 32-361 82-350 (588)
115 2xyi_A Probable histone-bindin 100.0 1.1E-26 3.8E-31 211.6 28.4 233 112-396 128-391 (430)
116 1l0q_A Surface layer protein; 100.0 1.9E-25 6.3E-30 201.1 33.1 252 32-385 28-288 (391)
117 3f3f_A Nucleoporin SEH1; struc 100.0 8.4E-26 2.9E-30 199.7 27.2 219 95-371 6-249 (351)
118 3bws_A Protein LP49; two-domai 99.9 2E-25 6.9E-30 203.7 29.6 259 33-385 120-403 (433)
119 4a11_B DNA excision repair pro 99.9 2.6E-25 8.8E-30 201.1 28.5 230 93-371 36-276 (408)
120 3jro_A Fusion protein of prote 99.9 3.3E-26 1.1E-30 222.4 23.9 239 94-398 3-269 (753)
121 3lrv_A PRE-mRNA-splicing facto 99.9 4.1E-26 1.4E-30 201.6 22.4 227 125-407 47-288 (343)
122 3bws_A Protein LP49; two-domai 99.9 6.9E-25 2.3E-29 200.1 29.4 238 32-370 166-431 (433)
123 1l0q_A Surface layer protein; 99.9 3.8E-24 1.3E-28 192.5 31.2 236 48-385 3-246 (391)
124 4gq1_A NUP37; propeller, trans 99.9 7.3E-25 2.5E-29 197.0 24.7 235 126-400 101-376 (393)
125 3vu4_A KMHSV2; beta-propeller 99.9 3.5E-24 1.2E-28 189.9 23.6 202 113-371 20-271 (355)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.3E-22 7.7E-27 181.9 29.5 252 31-386 113-400 (415)
127 2w18_A PALB2, fancn, partner a 99.9 4.1E-22 1.4E-26 169.4 26.8 176 202-407 154-353 (356)
128 1ri6_A Putative isomerase YBHE 99.9 5.8E-21 2E-25 168.3 29.7 257 31-371 33-308 (343)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.2E-21 1.1E-25 174.4 26.7 221 30-353 173-409 (415)
130 1nir_A Nitrite reductase; hemo 99.9 1.6E-20 5.4E-25 175.0 31.8 259 38-379 181-466 (543)
131 3hfq_A Uncharacterized protein 99.9 2.9E-20 9.8E-25 164.4 29.4 287 14-371 18-317 (347)
132 2ojh_A Uncharacterized protein 99.9 1.8E-21 6.3E-26 167.7 20.8 237 30-360 36-290 (297)
133 2ojh_A Uncharacterized protein 99.9 1.7E-20 5.7E-25 161.6 25.3 249 52-398 17-286 (297)
134 1nir_A Nitrite reductase; hemo 99.9 2.3E-20 7.7E-25 173.9 27.2 254 42-389 144-426 (543)
135 2oit_A Nucleoporin 214KDA; NH2 99.9 1.5E-21 5.2E-26 177.1 18.3 230 34-371 35-278 (434)
136 3u4y_A Uncharacterized protein 99.9 4.8E-20 1.7E-24 161.7 27.4 261 35-381 40-312 (331)
137 2ecf_A Dipeptidyl peptidase IV 99.9 9.4E-21 3.2E-25 184.6 23.1 283 35-388 36-383 (741)
138 3vgz_A Uncharacterized protein 99.9 2.1E-19 7.1E-24 159.1 28.4 265 32-384 37-315 (353)
139 3u4y_A Uncharacterized protein 99.9 7.7E-19 2.6E-23 154.1 30.4 240 42-375 4-255 (331)
140 3scy_A Hypothetical bacterial 99.9 1.6E-18 5.3E-23 154.1 32.1 265 34-371 48-337 (361)
141 2ecf_A Dipeptidyl peptidase IV 99.9 5.8E-20 2E-24 179.0 23.9 273 36-381 109-423 (741)
142 1pby_B Quinohemoprotein amine 99.8 7.6E-19 2.6E-23 154.3 26.0 246 48-384 2-322 (337)
143 1xfd_A DIP, dipeptidyl aminope 99.8 4.8E-20 1.6E-24 179.2 20.0 245 37-368 18-341 (723)
144 3o4h_A Acylamino-acid-releasin 99.8 2E-19 6.7E-24 170.3 23.3 260 34-370 20-314 (582)
145 2z3z_A Dipeptidyl aminopeptida 99.8 3.3E-19 1.1E-23 172.8 24.7 265 36-371 82-391 (706)
146 1ri6_A Putative isomerase YBHE 99.8 2.2E-18 7.7E-23 151.7 27.9 213 113-371 38-262 (343)
147 1jmx_B Amine dehydrogenase; ox 99.8 6.2E-19 2.1E-23 155.7 23.3 256 40-382 4-335 (349)
148 1xfd_A DIP, dipeptidyl aminope 99.8 4.7E-19 1.6E-23 172.2 24.5 270 37-373 62-395 (723)
149 2oit_A Nucleoporin 214KDA; NH2 99.8 1.1E-18 3.8E-23 158.2 24.9 230 32-371 89-333 (434)
150 2z3z_A Dipeptidyl aminopeptida 99.8 8.6E-19 2.9E-23 169.8 24.3 256 32-371 117-435 (706)
151 1k32_A Tricorn protease; prote 99.8 3.3E-18 1.1E-22 172.4 26.9 270 32-396 200-484 (1045)
152 3vgz_A Uncharacterized protein 99.8 2.4E-17 8.1E-22 145.8 27.2 238 33-359 86-331 (353)
153 1z68_A Fibroblast activation p 99.8 8.6E-19 2.9E-23 170.2 18.2 257 40-383 20-356 (719)
154 1k32_A Tricorn protease; prote 99.8 3.7E-18 1.3E-22 172.1 22.2 242 36-370 245-501 (1045)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-17 4.8E-22 148.1 23.2 257 36-371 40-341 (365)
156 1q7f_A NHL, brain tumor CG1071 99.8 6.9E-16 2.4E-20 132.2 31.8 263 12-371 8-280 (286)
157 3hfq_A Uncharacterized protein 99.8 3.5E-16 1.2E-20 138.0 28.0 233 113-390 40-292 (347)
158 4a5s_A Dipeptidyl peptidase 4 99.8 8.7E-17 3E-21 156.3 23.5 259 37-377 18-358 (740)
159 3pe7_A Oligogalacturonate lyas 99.7 4.3E-16 1.5E-20 139.7 22.6 261 41-384 41-340 (388)
160 3scy_A Hypothetical bacterial 99.7 8E-15 2.7E-19 130.1 30.5 216 113-370 50-290 (361)
161 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.8E-14 6E-19 128.0 30.1 220 114-376 41-296 (365)
162 3fvz_A Peptidyl-glycine alpha- 99.7 6E-15 2E-19 129.0 26.6 253 35-371 23-322 (329)
163 1z68_A Fibroblast activation p 99.7 2.3E-16 7.8E-21 153.2 19.1 262 38-371 62-391 (719)
164 3azo_A Aminopeptidase; POP fam 99.7 1.4E-15 4.9E-20 146.2 22.9 282 31-389 19-341 (662)
165 1jmx_B Amine dehydrogenase; ox 99.7 2.1E-15 7.2E-20 133.0 20.9 214 118-383 5-295 (349)
166 1pby_B Quinohemoprotein amine 99.7 8.1E-15 2.8E-19 128.5 24.1 209 127-384 2-281 (337)
167 3o4h_A Acylamino-acid-releasin 99.7 3E-15 1E-19 141.6 19.3 204 113-385 22-239 (582)
168 3pe7_A Oligogalacturonate lyas 99.7 7.3E-15 2.5E-19 131.6 19.8 257 34-371 79-382 (388)
169 3c5m_A Oligogalacturonate lyas 99.7 1.2E-14 4.1E-19 130.5 21.1 263 34-383 34-339 (396)
170 3e5z_A Putative gluconolactona 99.7 1E-13 3.5E-18 119.3 26.0 250 34-371 26-286 (296)
171 4a5s_A Dipeptidyl peptidase 4 99.6 2.2E-14 7.7E-19 139.3 22.3 210 113-374 17-296 (740)
172 2oiz_A Aromatic amine dehydrog 99.6 4.9E-14 1.7E-18 124.7 22.3 261 40-381 54-345 (361)
173 2dg1_A DRP35, lactonase; beta 99.6 9.4E-13 3.2E-17 115.3 28.9 243 33-359 42-297 (333)
174 3azo_A Aminopeptidase; POP fam 99.6 5.6E-14 1.9E-18 135.0 22.1 201 113-376 130-373 (662)
175 2xdw_A Prolyl endopeptidase; a 99.6 4E-13 1.4E-17 130.0 27.6 255 34-374 123-416 (710)
176 2bkl_A Prolyl endopeptidase; m 99.6 1.4E-13 4.8E-18 132.8 22.9 250 34-381 119-405 (695)
177 3c5m_A Oligogalacturonate lyas 99.6 5.5E-14 1.9E-18 126.2 16.7 261 40-370 85-381 (396)
178 2gop_A Trilobed protease; beta 99.6 8.2E-13 2.8E-17 116.3 23.0 231 36-383 59-340 (347)
179 1rwi_B Serine/threonine-protei 99.6 2.4E-12 8.2E-17 109.0 24.9 237 37-371 25-264 (270)
180 2dg1_A DRP35, lactonase; beta 99.6 2.2E-12 7.5E-17 112.9 24.7 253 36-383 6-273 (333)
181 1q7f_A NHL, brain tumor CG1071 99.5 2.1E-11 7.4E-16 104.1 27.6 235 113-404 30-271 (286)
182 3no2_A Uncharacterized protein 99.5 7.2E-12 2.5E-16 106.1 23.6 199 125-382 4-205 (276)
183 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.1E-11 7.1E-16 105.7 26.9 247 36-373 18-301 (314)
184 2z2n_A Virginiamycin B lyase; 99.5 2.5E-10 8.5E-15 98.0 33.2 239 34-369 13-253 (299)
185 3dsm_A Uncharacterized protein 99.5 3.5E-11 1.2E-15 104.9 27.8 251 36-383 44-312 (328)
186 3no2_A Uncharacterized protein 99.5 1.1E-11 3.9E-16 104.9 23.4 250 46-385 4-265 (276)
187 3fvz_A Peptidyl-glycine alpha- 99.5 2.9E-11 9.8E-16 105.6 25.6 237 113-401 24-309 (329)
188 2gop_A Trilobed protease; beta 99.5 9.3E-12 3.2E-16 109.5 21.3 240 33-379 12-298 (347)
189 1qks_A Cytochrome CD1 nitrite 99.5 4.3E-10 1.5E-14 104.6 32.4 262 34-372 195-478 (567)
190 2xdw_A Prolyl endopeptidase; a 99.4 5.5E-11 1.9E-15 115.1 27.1 216 113-385 125-381 (710)
191 2oiz_A Aromatic amine dehydrog 99.4 1.8E-11 6.1E-16 108.2 21.4 229 36-354 108-360 (361)
192 1qks_A Cytochrome CD1 nitrite 99.4 1.7E-10 5.9E-15 107.3 28.2 250 45-382 165-438 (567)
193 1yr2_A Prolyl oligopeptidase; 99.4 3.4E-11 1.2E-15 117.0 24.0 248 34-371 161-441 (741)
194 3e5z_A Putative gluconolactona 99.4 1.1E-10 3.8E-15 100.2 24.6 214 113-390 28-262 (296)
195 2mad_H Methylamine dehydrogena 99.4 3.3E-10 1.1E-14 100.2 27.6 256 40-379 70-357 (373)
196 3sjl_D Methylamine dehydrogena 99.4 1.2E-10 4E-15 101.9 22.9 263 40-385 82-376 (386)
197 2z2n_A Virginiamycin B lyase; 99.4 1.9E-09 6.6E-14 92.4 30.7 239 35-371 56-295 (299)
198 1xip_A Nucleoporin NUP159; bet 99.4 3.2E-11 1.1E-15 105.9 18.7 213 12-358 14-230 (388)
199 2qc5_A Streptogramin B lactona 99.4 6.9E-09 2.4E-13 88.9 33.2 239 35-370 19-259 (300)
200 3hrp_A Uncharacterized protein 99.4 4.3E-10 1.5E-14 100.9 26.0 261 35-369 130-408 (409)
201 3g4e_A Regucalcin; six bladed 99.4 5.7E-10 2E-14 95.8 25.7 238 38-359 15-259 (297)
202 2bkl_A Prolyl endopeptidase; m 99.4 1.1E-10 3.9E-15 112.5 22.8 213 113-382 121-360 (695)
203 3dsm_A Uncharacterized protein 99.3 1.4E-09 4.8E-14 94.7 22.9 209 34-318 82-305 (328)
204 1rwi_B Serine/threonine-protei 99.3 3.4E-09 1.2E-13 89.4 24.4 195 114-371 25-222 (270)
205 2qc5_A Streptogramin B lactona 99.3 1.7E-08 5.8E-13 86.5 28.8 236 36-369 62-298 (300)
206 3c75_H MADH, methylamine dehyd 99.3 1.1E-09 3.7E-14 97.5 21.2 258 40-379 122-409 (426)
207 2ghs_A AGR_C_1268P; regucalcin 99.2 2.4E-08 8.3E-13 86.8 27.7 227 38-359 51-289 (326)
208 3dr2_A Exported gluconolactona 99.2 1E-08 3.5E-13 88.3 25.2 250 33-369 42-304 (305)
209 1yr2_A Prolyl oligopeptidase; 99.2 4.3E-09 1.5E-13 102.2 24.5 221 113-381 163-403 (741)
210 3g4e_A Regucalcin; six bladed 99.2 3.3E-08 1.1E-12 84.7 25.1 214 115-385 15-242 (297)
211 3iuj_A Prolyl endopeptidase; h 99.1 4.8E-09 1.7E-13 101.0 21.7 244 34-371 127-405 (693)
212 3hrp_A Uncharacterized protein 99.1 2.6E-08 9E-13 89.3 24.8 223 113-382 131-363 (409)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 3.4E-08 1.2E-12 85.2 23.2 208 34-315 69-300 (314)
214 1mda_H Methylamine dehydrogena 99.1 1E-08 3.6E-13 89.7 19.5 78 288-384 269-358 (368)
215 1xip_A Nucleoporin NUP159; bet 99.1 3.4E-09 1.2E-13 93.0 16.3 170 176-397 42-227 (388)
216 2qe8_A Uncharacterized protein 99.1 3.5E-08 1.2E-12 86.4 21.2 240 33-368 64-318 (343)
217 3dr2_A Exported gluconolactona 99.0 1.2E-07 4E-12 81.6 22.1 212 113-387 45-281 (305)
218 3iuj_A Prolyl endopeptidase; h 98.9 8.8E-08 3E-12 92.2 20.0 218 113-379 129-365 (693)
219 2ece_A 462AA long hypothetical 98.9 1.1E-06 3.7E-11 77.6 24.6 218 115-360 140-399 (462)
220 2ghs_A AGR_C_1268P; regucalcin 98.9 1.1E-06 3.8E-11 76.2 24.6 208 115-384 51-271 (326)
221 2mad_H Methylamine dehydrogena 98.9 9.8E-06 3.3E-10 71.5 30.2 260 42-382 27-317 (373)
222 1fwx_A Nitrous oxide reductase 98.9 1.3E-07 4.5E-12 86.4 18.1 124 235-371 278-431 (595)
223 2qe8_A Uncharacterized protein 98.9 2.1E-06 7.3E-11 75.0 25.2 79 284-374 196-280 (343)
224 2hz6_A Endoplasmic reticulum t 98.8 5E-09 1.7E-13 92.7 7.5 186 125-380 8-200 (369)
225 1npe_A Nidogen, entactin; glyc 98.8 1.5E-05 5.2E-10 66.8 27.9 207 113-382 36-248 (267)
226 3sjl_D Methylamine dehydrogena 98.8 2.4E-06 8.2E-11 74.8 23.2 260 41-383 38-331 (386)
227 1mda_H Methylamine dehydrogena 98.7 4.2E-07 1.4E-11 79.6 16.3 71 239-318 269-350 (368)
228 2iwa_A Glutamine cyclotransfer 98.7 6.2E-06 2.1E-10 68.2 22.2 207 32-315 15-238 (266)
229 2hz6_A Endoplasmic reticulum t 98.7 3.1E-08 1E-12 87.6 7.5 186 46-318 8-196 (369)
230 3c75_H MADH, methylamine dehyd 98.7 4.7E-06 1.6E-10 74.2 21.3 258 45-383 82-370 (426)
231 1yiq_A Quinohemoprotein alcoho 98.7 1.1E-05 3.6E-10 77.4 25.2 64 304-385 454-518 (689)
232 1kb0_A Quinohemoprotein alcoho 98.7 1.4E-05 4.6E-10 76.5 25.5 62 305-384 457-519 (677)
233 3nol_A Glutamine cyclotransfer 98.6 1.6E-05 5.4E-10 65.0 21.3 189 38-302 45-244 (262)
234 3q7m_A Lipoprotein YFGL, BAMB; 98.6 1.9E-05 6.4E-10 69.9 23.4 219 127-407 144-372 (376)
235 1npe_A Nidogen, entactin; glyc 98.5 8.6E-05 2.9E-09 62.2 23.9 201 36-318 36-242 (267)
236 2ece_A 462AA long hypothetical 98.5 2.5E-05 8.7E-10 69.0 20.8 215 125-371 94-352 (462)
237 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.00013 4.4E-09 64.5 24.7 190 126-380 103-304 (376)
238 3qqz_A Putative uncharacterize 98.4 0.00019 6.5E-09 59.0 23.1 219 113-369 27-251 (255)
239 3nok_A Glutaminyl cyclase; bet 98.4 3.7E-05 1.3E-09 62.9 18.4 188 38-303 57-255 (268)
240 3mbr_X Glutamine cyclotransfer 98.4 0.00025 8.5E-09 57.5 22.6 189 37-303 22-224 (243)
241 2iwa_A Glutamine cyclotransfer 98.4 9.3E-05 3.2E-09 61.2 20.2 209 115-371 23-237 (266)
242 2fp8_A Strictosidine synthase; 98.4 0.00017 5.9E-09 62.2 22.8 266 37-371 20-313 (322)
243 3hxj_A Pyrrolo-quinoline quino 98.4 4.9E-05 1.7E-09 65.7 19.0 186 127-382 108-293 (330)
244 3v65_B Low-density lipoprotein 98.3 0.0015 5E-08 57.9 30.6 207 113-380 116-326 (386)
245 3nol_A Glutamine cyclotransfer 98.3 9.1E-05 3.1E-09 60.6 18.4 198 113-361 43-245 (262)
246 2p4o_A Hypothetical protein; p 98.3 0.00031 1E-08 60.1 22.7 232 36-359 32-275 (306)
247 3hxj_A Pyrrolo-quinoline quino 98.3 0.00012 4.2E-09 63.2 19.6 186 115-371 139-324 (330)
248 3v64_C Agrin; beta propeller, 98.3 0.0019 6.5E-08 56.3 30.2 207 113-380 73-283 (349)
249 4a2l_A BT_4663, two-component 98.3 0.0045 1.5E-07 60.6 33.1 271 35-385 356-626 (795)
250 1kb0_A Quinohemoprotein alcoho 98.2 0.00018 6.1E-09 68.8 21.7 55 254-318 457-511 (677)
251 1fwx_A Nitrous oxide reductase 98.2 5.9E-05 2E-09 69.2 16.7 86 284-383 278-382 (595)
252 3mbr_X Glutamine cyclotransfer 98.2 0.00075 2.6E-08 54.7 20.5 198 113-361 21-224 (243)
253 1yiq_A Quinohemoprotein alcoho 98.2 0.00027 9.1E-09 67.8 20.9 80 254-358 455-534 (689)
254 4a2l_A BT_4663, two-component 98.1 0.0082 2.8E-07 58.7 32.6 271 35-381 309-579 (795)
255 3v65_B Low-density lipoprotein 98.0 0.0027 9.3E-08 56.1 23.4 184 128-371 89-277 (386)
256 3v9f_A Two-component system se 98.0 0.0058 2E-07 59.6 27.5 264 35-382 312-577 (781)
257 3tc9_A Hypothetical hydrolase; 98.0 0.0047 1.6E-07 55.5 24.8 254 36-370 137-429 (430)
258 3nok_A Glutaminyl cyclase; bet 98.0 0.0013 4.3E-08 53.9 18.9 198 113-361 55-255 (268)
259 3v9f_A Two-component system se 98.0 0.0081 2.8E-07 58.6 28.4 261 35-384 362-622 (781)
260 3qqz_A Putative uncharacterize 98.0 0.0017 5.9E-08 53.3 19.4 203 176-407 31-238 (255)
261 2xe4_A Oligopeptidase B; hydro 98.0 0.0021 7.2E-08 62.4 23.3 199 37-312 175-398 (751)
262 1kv9_A Type II quinohemoprotei 98.0 0.0027 9.4E-08 60.6 23.6 63 304-384 437-500 (668)
263 3v64_C Agrin; beta propeller, 97.9 0.008 2.8E-07 52.3 26.0 184 128-371 46-234 (349)
264 1ijq_A LDL receptor, low-densi 97.9 0.0075 2.6E-07 51.7 25.5 187 129-371 4-195 (316)
265 1k3i_A Galactose oxidase precu 97.9 0.0029 1E-07 60.4 22.3 78 40-152 190-281 (656)
266 4hw6_A Hypothetical protein, I 97.8 0.0056 1.9E-07 55.0 22.2 219 114-381 140-381 (433)
267 3tc9_A Hypothetical hydrolase; 97.8 0.0085 2.9E-07 53.8 22.8 157 114-314 138-301 (430)
268 4hw6_A Hypothetical protein, I 97.8 0.019 6.5E-07 51.5 27.0 128 236-370 275-432 (433)
269 2fp8_A Strictosidine synthase; 97.8 0.0045 1.5E-07 53.2 19.9 157 115-315 128-314 (322)
270 1k3i_A Galactose oxidase precu 97.8 0.0049 1.7E-07 58.8 21.8 79 37-151 244-329 (656)
271 2ad6_A Methanol dehydrogenase 97.7 0.0085 2.9E-07 56.0 22.1 63 304-384 443-506 (571)
272 2p4o_A Hypothetical protein; p 97.7 0.016 5.6E-07 49.3 22.5 205 114-375 33-244 (306)
273 3sov_A LRP-6, low-density lipo 97.7 0.018 6E-07 49.4 27.7 206 114-380 36-246 (318)
274 1kv9_A Type II quinohemoprotei 97.7 0.03 1E-06 53.4 26.2 74 238-318 234-337 (668)
275 1ijq_A LDL receptor, low-densi 97.6 0.026 8.8E-07 48.3 30.6 209 113-380 30-246 (316)
276 2xe4_A Oligopeptidase B; hydro 97.6 0.00096 3.3E-08 64.7 14.2 114 235-371 175-304 (751)
277 3p5b_L Low density lipoprotein 97.6 0.035 1.2E-06 49.2 29.7 209 113-380 112-328 (400)
278 3m0c_C LDL receptor, low-densi 97.6 0.05 1.7E-06 52.7 25.5 114 234-371 471-589 (791)
279 2xbg_A YCF48-like protein; pho 97.5 0.033 1.1E-06 47.9 28.0 117 233-369 204-320 (327)
280 3p5b_L Low density lipoprotein 97.5 0.042 1.4E-06 48.8 26.1 188 128-371 85-277 (400)
281 3m0c_C LDL receptor, low-densi 97.4 0.1 3.5E-06 50.5 29.9 208 113-380 424-640 (791)
282 1w6s_A Methanol dehydrogenase 97.4 0.083 2.8E-06 49.5 23.7 32 352-384 483-515 (599)
283 3kya_A Putative phosphatase; s 97.4 0.078 2.7E-06 48.0 23.0 165 114-313 140-340 (496)
284 1n7d_A LDL receptor, low-densi 97.4 0.0021 7.3E-08 61.6 12.9 207 114-380 407-622 (699)
285 3sre_A PON1, serum paraoxonase 97.3 0.059 2E-06 46.6 20.3 73 283-369 221-296 (355)
286 1flg_A Protein (quinoprotein e 97.3 0.099 3.4E-06 48.9 23.2 64 304-385 465-529 (582)
287 3sov_A LRP-6, low-density lipo 97.3 0.07 2.4E-06 45.6 22.8 203 35-317 34-241 (318)
288 1n7d_A LDL receptor, low-densi 97.2 0.0064 2.2E-07 58.3 14.9 209 36-318 406-618 (699)
289 3kya_A Putative phosphatase; s 97.2 0.11 3.8E-06 47.0 26.5 178 175-371 250-475 (496)
290 3a9g_A Putative uncharacterize 97.2 0.097 3.3E-06 45.5 24.0 65 283-360 259-330 (354)
291 3ei3_A DNA damage-binding prot 97.1 0.28 9.7E-06 49.7 31.4 33 35-67 553-592 (1158)
292 2g8s_A Glucose/sorbosone dehyd 97.1 0.13 4.6E-06 44.6 25.2 73 283-369 271-350 (353)
293 2xbg_A YCF48-like protein; pho 96.9 0.16 5.6E-06 43.5 33.8 151 233-407 162-316 (327)
294 4a0p_A LRP6, LRP-6, low-densit 96.9 0.31 1.1E-05 46.0 25.5 185 128-371 8-197 (628)
295 2ism_A Putative oxidoreductase 96.9 0.2 6.8E-06 43.5 23.6 62 284-359 269-332 (352)
296 3sre_A PON1, serum paraoxonase 96.8 0.13 4.5E-06 44.4 18.0 145 202-373 80-254 (355)
297 2p9w_A MAL S 1 allergenic prot 96.8 0.19 6.3E-06 42.7 19.7 182 115-314 15-215 (334)
298 1flg_A Protein (quinoprotein e 96.8 0.11 3.8E-06 48.5 18.2 57 252-318 464-520 (582)
299 3pbp_A Nucleoporin NUP82; beta 96.7 0.041 1.4E-06 48.3 13.8 125 235-366 67-207 (452)
300 3amr_A 3-phytase; beta-propell 96.6 0.28 9.6E-06 42.0 22.5 109 198-313 146-262 (355)
301 2p9w_A MAL S 1 allergenic prot 96.6 0.12 4E-06 43.9 15.1 123 235-371 64-215 (334)
302 3das_A Putative oxidoreductase 96.5 0.35 1.2E-05 41.6 24.4 33 35-67 31-63 (347)
303 3s94_A LRP-6, low-density lipo 96.4 0.66 2.2E-05 43.7 22.6 203 113-378 40-249 (619)
304 2ism_A Putative oxidoreductase 96.3 0.19 6.6E-06 43.5 16.0 114 234-359 31-152 (352)
305 4a0p_A LRP6, LRP-6, low-densit 96.3 0.73 2.5E-05 43.5 31.1 204 114-380 38-245 (628)
306 3s94_A LRP-6, low-density lipo 96.3 0.76 2.6E-05 43.3 21.5 202 35-316 39-245 (619)
307 2ad6_A Methanol dehydrogenase 96.3 0.73 2.5E-05 42.9 26.3 29 126-154 115-143 (571)
308 3amr_A 3-phytase; beta-propell 96.2 0.5 1.7E-05 40.5 22.5 209 126-380 40-272 (355)
309 3a9g_A Putative uncharacterize 96.0 0.26 9.1E-06 42.7 15.0 113 234-359 29-152 (354)
310 3pbp_A Nucleoporin NUP82; beta 95.9 0.33 1.1E-05 42.7 14.9 118 240-371 27-158 (452)
311 1tl2_A L10, protein (tachylect 95.5 0.69 2.4E-05 36.6 15.1 65 234-308 135-204 (236)
312 2g8s_A Glucose/sorbosone dehyd 95.4 0.86 2.9E-05 39.5 15.9 79 234-314 18-107 (353)
313 1cru_A Protein (soluble quinop 94.9 0.76 2.6E-05 41.4 14.5 117 234-360 27-162 (454)
314 1tl2_A L10, protein (tachylect 94.9 0.2 6.7E-06 39.7 9.1 115 235-366 42-158 (236)
315 3das_A Putative oxidoreductase 94.8 1.7 5.9E-05 37.3 18.0 115 234-359 32-157 (347)
316 2wg3_C Hedgehog-interacting pr 93.8 1.8 6.2E-05 39.0 14.3 119 234-361 14-158 (463)
317 1w6s_A Methanol dehydrogenase 93.5 5 0.00017 37.5 26.8 78 239-318 246-346 (599)
318 3s25_A Hypothetical 7-bladed b 93.2 3.3 0.00011 34.8 21.4 106 239-380 150-262 (302)
319 2xzh_A Clathrin heavy chain 1; 92.5 4.4 0.00015 34.4 26.6 227 126-406 78-325 (365)
320 1xi4_A Clathrin heavy chain; a 92.0 13 0.00044 38.6 19.5 227 126-406 77-324 (1630)
321 3s25_A Hypothetical 7-bladed b 91.8 4.8 0.00016 33.8 13.6 63 240-316 110-178 (302)
322 3sbq_A Nitrous-oxide reductase 90.9 2.3 7.7E-05 38.9 10.8 79 235-315 324-409 (638)
323 2xzh_A Clathrin heavy chain 1; 90.8 6.7 0.00023 33.3 12.8 103 253-386 48-150 (365)
324 1cru_A Protein (soluble quinop 89.5 11 0.00039 33.7 19.2 36 114-152 28-64 (454)
325 1bpo_A Protein (clathrin); cla 88.6 13 0.00043 33.1 29.5 227 126-406 77-324 (494)
326 3ii7_A Kelch-like protein 7; p 87.7 11 0.00038 31.4 17.9 27 126-152 102-134 (306)
327 3q6k_A 43.2 kDa salivary prote 87.4 9.1 0.00031 33.3 11.9 111 255-370 124-252 (381)
328 1bpo_A Protein (clathrin); cla 86.7 17 0.00057 32.3 26.5 210 41-318 71-293 (494)
329 2be1_A Serine/threonine-protei 86.0 5.2 0.00018 34.2 9.6 29 127-155 11-39 (339)
330 2vpj_A Kelch-like protein 12; 85.0 15 0.00052 30.4 19.3 28 126-153 113-145 (301)
331 3ii7_A Kelch-like protein 7; p 84.7 16 0.00055 30.3 22.6 28 126-153 56-87 (306)
332 1xi4_A Clathrin heavy chain; a 83.9 45 0.0015 34.8 18.8 173 113-318 106-293 (1630)
333 2xn4_A Kelch-like protein 2; s 80.4 23 0.0008 29.2 18.2 65 244-317 204-279 (302)
334 4gq2_M Nucleoporin NUP120; bet 79.6 52 0.0018 32.8 15.1 40 114-155 237-276 (950)
335 3f7f_A Nucleoporin NUP120; nuc 79.6 41 0.0014 32.0 13.5 39 113-155 222-260 (729)
336 3ott_A Two-component system se 79.4 46 0.0016 32.0 27.1 123 234-370 324-447 (758)
337 2vpj_A Kelch-like protein 12; 76.0 32 0.0011 28.3 22.4 65 244-317 159-234 (301)
338 3ott_A Two-component system se 74.4 63 0.0022 31.0 28.2 115 234-371 146-260 (758)
339 3ei3_A DNA damage-binding prot 73.8 84 0.0029 32.1 25.3 115 234-370 514-635 (1158)
340 2wg3_C Hedgehog-interacting pr 71.4 30 0.001 31.1 10.1 115 172-303 14-158 (463)
341 2xn4_A Kelch-like protein 2; s 68.7 48 0.0016 27.3 20.3 28 126-153 62-94 (302)
342 2uvk_A YJHT; unknown function, 67.2 57 0.002 27.6 15.8 28 126-153 66-103 (357)
343 1zgk_A Kelch-like ECH-associat 67.1 53 0.0018 27.2 17.3 64 244-316 215-289 (308)
344 3sbq_A Nitrous-oxide reductase 66.9 24 0.00083 32.4 8.3 77 285-371 325-408 (638)
345 4asc_A Kelch repeat and BTB do 66.0 56 0.0019 27.1 17.8 27 126-152 99-133 (315)
346 4asc_A Kelch repeat and BTB do 64.3 61 0.0021 26.9 20.2 65 244-317 148-224 (315)
347 1zgk_A Kelch-like ECH-associat 64.3 60 0.0021 26.8 22.6 65 244-317 168-243 (308)
348 3zwu_A Alkaline phosphatase PH 62.5 28 0.00096 32.3 8.2 60 284-359 477-548 (592)
349 4gq2_M Nucleoporin NUP120; bet 60.2 55 0.0019 32.6 10.4 38 235-273 237-275 (950)
350 2zwa_A Leucine carboxyl methyl 56.6 1.4E+02 0.0047 28.5 19.2 28 125-152 451-484 (695)
351 2uvk_A YJHT; unknown function, 56.5 90 0.0031 26.3 14.9 18 136-153 168-185 (357)
352 4a9v_A PHOX; hydrolase, beta-p 55.4 59 0.002 30.0 8.8 61 283-359 476-548 (592)
353 4fhn_B Nucleoporin NUP120; pro 53.6 41 0.0014 34.3 8.5 39 115-155 240-278 (1139)
354 2be1_A Serine/threonine-protei 47.9 16 0.00055 31.2 3.8 28 353-381 111-139 (339)
355 4fhn_B Nucleoporin NUP120; pro 41.7 14 0.00047 37.8 2.9 34 36-69 238-271 (1139)
356 2woz_A Kelch repeat and BTB do 37.8 1.7E+02 0.0058 24.1 17.9 27 126-152 110-143 (318)
357 2loj_A Putative cytoplasmic pr 37.5 63 0.0022 19.4 4.1 36 16-52 27-62 (63)
358 3f7f_A Nucleoporin NUP120; nuc 37.3 39 0.0013 32.2 4.9 34 34-69 220-253 (729)
359 4a9v_A PHOX; hydrolase, beta-p 35.9 2.2E+02 0.0076 26.3 9.4 60 234-301 476-548 (592)
360 3zwu_A Alkaline phosphatase PH 30.2 2E+02 0.0069 26.7 8.4 20 232-251 529-548 (592)
361 2zwa_A Leucine carboxyl methyl 27.0 4.1E+02 0.014 25.2 18.4 70 243-316 499-579 (695)
362 3q6k_A 43.2 kDa salivary prote 22.6 3.8E+02 0.013 23.2 20.2 75 234-314 220-306 (381)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3e-40 Score=287.13 Aligned_cols=264 Identities=16% Similarity=0.182 Sum_probs=219.6
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|++++|++|+.||+|+|||+.++. .+..+..|.
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~-----------------------~~~~~~~~~---------- 55 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV-----------------------EVRSIQVTE---------- 55 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----------------------EEEEEECCS----------
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----------------------eeEEeeccC----------
Confidence 35799999999999999999999999999999988764 345677887
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
.+|.+++|+|+ +.+|++|+.|++|++||+.+++....+..+.. .+. +++|+|++..+
T Consensus 56 --~~v~~~~~~~~--~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~--------~v~-------~~~~~~~~~~l---- 112 (304)
T 2ynn_A 56 --TPVRAGKFIAR--KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD--------YIR-------SIAVHPTKPYV---- 112 (304)
T ss_dssp --SCEEEEEEEGG--GTEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEE-------EEEECSSSSEE----
T ss_pred --CcEEEEEEeCC--CCEEEEECCCCEEEEEECCCCcEEEEEeCCCC--------cEE-------EEEEcCCCCEE----
Confidence 77999999866 78999999999999999999988877766533 344 78999999988
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
++++.|+.|++|| +.... ..... +.+|...|.+++|+| ++..|++| .|++|++||++......
T Consensus 113 --------~sgs~D~~v~lWd-~~~~~-----~~~~~-~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 113 --------LSGSDDLTVKLWN-WENNW-----ALEQT-FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (304)
T ss_dssp --------EEEETTSCEEEEE-GGGTT-----EEEEE-ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE
T ss_pred --------EEECCCCeEEEEE-CCCCc-----chhhh-hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 9999999999999 43311 12223 478999999999999 57899998 99999999998555444
Q ss_pred eEeecCCCcccCCcCCeEEEEEcC--CCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEE
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHP--THCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
.. ...|...+..+.|+| ++ .+|++|+.|++|++||+++++.+ ..+.+| ...|.+
T Consensus 178 ~~-------~~~~~~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~~~~~----~~~~~h------------~~~v~~ 233 (304)
T 2ynn_A 178 TL-------TTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKSCV----ATLEGH------------MSNVSF 233 (304)
T ss_dssp EE-------ECCCTTCEEEEEECCSTTC-CEEEEEETTSEEEEEETTTTEEE----EEEECC------------SSCEEE
T ss_pred ee-------ccCCcCcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCCCccc----eeeCCC------------CCCEEE
Confidence 33 345667889999987 55 79999999999999999988654 566666 578999
Q ss_pred EEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEE
Q 015363 347 IKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVM 390 (408)
Q Consensus 347 ~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
++|+|++.+|++|+ |++|++||+++ +++++++..|......+.
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~-~~~~~~~~~~~~~~~~~~ 277 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSST-YKVEKTLNVGLERSWCIA 277 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTT-CCEEEEECCSSSSEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCC-CceeeeccCCCccEEEEE
Confidence 99999999999985 79999999998 799999998877666665
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=290.61 Aligned_cols=281 Identities=19% Similarity=0.269 Sum_probs=225.2
Q ss_pred ceeeccceEEEEECCC----CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccc
Q 015363 31 EVQEVDIISAIEFDKS----GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYL 106 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~----~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~ 106 (408)
..+|.+.|++++|+|+ +.+|++|+.|++|+||++.+... .....+.+|.
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~---------------------~~~~~l~gh~------ 80 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL---------------------DLQWSLEGHQ------ 80 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE---------------------EEEEEECCCS------
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe---------------------eeeeeeccCC------
Confidence 3479999999999985 67999999999999999876532 1344678898
Q ss_pred cccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 107 KSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 107 ~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
..|.+++|+|+ +.++++++.|++|++||+.+++....+..+.. .+. .++|+|+++.+
T Consensus 81 ------~~v~~~~~~~~--~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~--------~~~-------~~~~spdg~~l 137 (321)
T 3ow8_A 81 ------LGVVSVDISHT--LPIAASSSLDAHIRLWDLENGKQIKSIDAGPV--------DAW-------TLAFSPDSQYL 137 (321)
T ss_dssp ------SCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEECCTT--------CCC-------CEEECTTSSEE
T ss_pred ------CCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCCEEEEEeCCCc--------cEE-------EEEECCCCCEE
Confidence 77999999755 77999999999999999999987776654322 122 68999999998
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.++.|++|+ +... ..... +..|...+.+++|+|++++|+++ .|+.|++||+++ .
T Consensus 138 ------------~~g~~dg~v~i~~-~~~~------~~~~~-~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~-~ 196 (321)
T 3ow8_A 138 ------------ATGTHVGKVNIFG-VESG------KKEYS-LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-G 196 (321)
T ss_dssp ------------EEECTTSEEEEEE-TTTC------SEEEE-EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-T
T ss_pred ------------EEEcCCCcEEEEE-cCCC------ceeEE-ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC-C
Confidence 9999999999999 4332 22223 26677889999999999999999 999999999984 4
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
+.... +.+|...|++++|+|++ ++|++|+.|+.|++||++++... ..+.+| ...|.
T Consensus 197 ~~~~~-------~~~h~~~v~~l~~spd~-~~l~s~s~dg~i~iwd~~~~~~~----~~~~~h------------~~~v~ 252 (321)
T 3ow8_A 197 KLLHT-------LEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYDVQHANLA----GTLSGH------------ASWVL 252 (321)
T ss_dssp EEEEE-------ECCCSSCCCEEEECTTS-CEEEEECTTSCEEEEETTTCCEE----EEECCC------------SSCEE
T ss_pred cEEEE-------EcccCCceeEEEEcCCC-CEEEEEcCCCeEEEEECCCccee----EEEcCC------------CCceE
Confidence 44433 57899999999999999 99999999999999999987553 455555 57899
Q ss_pred EEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCee-eee--eceeeec
Q 015363 346 DIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYF-MGL--DNIHTLY 407 (408)
Q Consensus 346 ~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--d~~~~~~ 407 (408)
+++|+|++++|++++ |++|++||+++ +++++++.+|......+....++.. +.. |...+||
T Consensus 253 ~~~~sp~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 253 NVAFCPDDTHFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCC-CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 999999999999985 79999999998 7999999999888777765445443 332 4445554
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-40 Score=299.36 Aligned_cols=281 Identities=17% Similarity=0.291 Sum_probs=233.3
Q ss_pred cceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 30 EEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
...+|.++|++++|+|++.+|++|+.||+|+|||+.+++. ...+.+|.
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~-----------------------~~~l~~h~--------- 150 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-----------------------ERTLKGHT--------- 150 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC-----------------------CEEECCCS---------
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-----------------------EEEEeccC---------
Confidence 3457999999999999999999999999999999987753 45788898
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..|.+++|+|+ +.+|++|+.|++|++||+.++++...+..+.. .+. ++.|+|++..+
T Consensus 151 ---~~V~~v~~~~~--~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~--------~V~-------~v~~~p~~~~l--- 207 (410)
T 1vyh_C 151 ---DSVQDISFDHS--GKLLASCSADMTIKLWDFQGFECIRTMHGHDH--------NVS-------SVSIMPNGDHI--- 207 (410)
T ss_dssp ---SCEEEEEECTT--SSEEEEEETTSCCCEEETTSSCEEECCCCCSS--------CEE-------EEEECSSSSEE---
T ss_pred ---CcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCC--------CEE-------EEEEeCCCCEE---
Confidence 77999999754 88999999999999999999887776655432 344 78999999987
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
++++.|+.|++|| +.. ..+...+ .+|...|.+++++|++.+|+++ .|+.|++||+.+.. ..
T Consensus 208 ---------~s~s~D~~i~~wd-~~~------~~~~~~~-~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~ 269 (410)
T 1vyh_C 208 ---------VSASRDKTIKMWE-VQT------GYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-CK 269 (410)
T ss_dssp ---------EEEETTSEEEEEE-TTT------CCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EE
T ss_pred ---------EEEeCCCeEEEEE-CCC------CcEEEEE-eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-ee
Confidence 9999999999999 433 3444554 7899999999999999999999 99999999998543 33
Q ss_pred eEeecCCCcccCCcCCeEEEEEcCC--------------------CCceEEEEeCCCeEEEEEcCCCceecccccccccc
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHPT--------------------HCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQ 328 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p~--------------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 328 (408)
.. +.+|...|.+++|+|+ + .+|++|+.|+.|++||++++... ..+.+|
T Consensus 270 ~~-------~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~sgs~D~~i~iwd~~~~~~~----~~~~~h 337 (410)
T 1vyh_C 270 AE-------LREHRHVVECISWAPESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCL----MTLVGH 337 (410)
T ss_dssp EE-------ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C-CEEEEEETTSEEEEEETTTTEEE----EEEECC
T ss_pred eE-------ecCCCceEEEEEEcCcccccchhhhccccccccCCCC-CEEEEEeCCCeEEEEECCCCceE----EEEECC
Confidence 32 5778999999999996 4 68999999999999999988654 555555
Q ss_pred cCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeee---eeecee
Q 015363 329 EAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFM---GLDNIH 404 (408)
Q Consensus 329 ~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~ 404 (408)
...|.+++|+|+|++|++|+ |+.|++||+.+ +++++++.+|......+....++..+ +.|...
T Consensus 338 ------------~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i 404 (410)
T 1vyh_C 338 ------------DNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 404 (410)
T ss_dssp ------------SSCEEEEEECSSSSCEEEEETTTEEEEECCTT-SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEE
T ss_pred ------------CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 47899999999999999985 79999999987 79999999999887777654444443 236666
Q ss_pred eecC
Q 015363 405 TLYE 408 (408)
Q Consensus 405 ~~~~ 408 (408)
++|+
T Consensus 405 ~vW~ 408 (410)
T 1vyh_C 405 KVWE 408 (410)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6664
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.4e-38 Score=278.62 Aligned_cols=280 Identities=15% Similarity=0.254 Sum_probs=222.4
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|++++|++|+.||+|+|||..++. ....+..|.
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~-----------------------~~~~~~~~~---------- 97 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN-----------------------KVHAIPLRS---------- 97 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC-----------------------EEEEEECSS----------
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC-----------------------cceEeecCC----------
Confidence 45799999999999999999999999999999987664 245567777
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc----EEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK----VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
..|.+++|+|+ +.++++++.|+.|++|++.+.+ ....+..+ .+.+. ++.|++++. +
T Consensus 98 --~~v~~~~~s~~--~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h--------~~~v~-------~~~~~~~~~-l 157 (340)
T 1got_B 98 --SWVMTCAYAPS--GNYVACGGLDNICSIYNLKTREGNVRVSRELAGH--------TGYLS-------CCRFLDDNQ-I 157 (340)
T ss_dssp --SCEEEEEECTT--SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECC--------SSCEE-------EEEEEETTE-E
T ss_pred --ccEEEEEECCC--CCEEEEEeCCCeEEEEECccCCCcceeEEEecCC--------CccEE-------EEEECCCCc-E
Confidence 77999999755 8899999999999999998653 22223332 22333 577888776 4
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.|+.|++|| +.. ..+...+ .+|...|.+++|+|++++|++| .|+.|++||+++.
T Consensus 158 ------------~s~s~d~~i~~wd-~~~------~~~~~~~-~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~- 216 (340)
T 1got_B 158 ------------VTSSGDTTCALWD-IET------GQQTTTF-TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG- 216 (340)
T ss_dssp ------------EEEETTSCEEEEE-TTT------TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-
T ss_pred ------------EEEECCCcEEEEE-CCC------CcEEEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-
Confidence 8889999999999 432 2333443 7899999999999999999999 9999999999854
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
..... +.+|...|++++|+|++ .+|++|+.|++|++||+++++.. ..+..+ .+...|.
T Consensus 217 ~~~~~-------~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~----~~~~~~----------~~~~~v~ 274 (340)
T 1got_B 217 MCRQT-------FTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQEL----MTYSHD----------NIICGIT 274 (340)
T ss_dssp SEEEE-------ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE----EEECCT----------TCCSCEE
T ss_pred eeEEE-------EcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCcEE----EEEccC----------CcccceE
Confidence 34333 57899999999999999 99999999999999999987543 222211 1135799
Q ss_pred EEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeeee---eeceeeec
Q 015363 346 DIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMG---LDNIHTLY 407 (408)
Q Consensus 346 ~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~~~~ 407 (408)
+++|+|+|++|++|+ |+.|++||+.+ ++.+..+.+|......+....++..++ .|...+||
T Consensus 275 ~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 275 SVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred EEEECCCCCEEEEECCCCeEEEEEccc-CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 999999999999995 69999999997 789999999999888887655555442 35555665
No 5
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.9e-39 Score=293.06 Aligned_cols=326 Identities=59% Similarity=0.945 Sum_probs=240.5
Q ss_pred ccCcccceeeecccCcCcccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCcc
Q 015363 11 AAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEF 90 (408)
Q Consensus 11 ~~~~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 90 (408)
...++.|+|.|+|++. .++++|.+.|++++|+|+|++||+|+.||.|+||++.++... .....+++
T Consensus 6 ~~~~~~w~~~q~~~~~--~~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~------------~~~~~~~~ 71 (447)
T 3dw8_B 6 GGNDIQWCFSQVKGAV--DDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKI------------QSHSRGEY 71 (447)
T ss_dssp --CCCCCEEEECCSCS--SSCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----------------CCCCCCE
T ss_pred CCcceeEEEEEecccc--cccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCC------------Ccccccce
Confidence 4568899999999873 456889999999999999999999999999999999876521 00122355
Q ss_pred ceeeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEee
Q 015363 91 RYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGS 170 (408)
Q Consensus 91 ~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (408)
+....+.+|..+++++.++.....|++++|+|+.+..+|++++.|++|++||+.+++..........
T Consensus 72 ~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~------------- 138 (447)
T 3dw8_B 72 NVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKE------------- 138 (447)
T ss_dssp EEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------------
T ss_pred eEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccC-------------
Confidence 6678899999999999999999999999998764337999999999999999987654322111000
Q ss_pred cCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEE
Q 015363 171 HVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFIS 250 (408)
Q Consensus 171 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 250 (408)
.+|.. .....-..+.+.. +...+......+.+.+..+|...|++++|+|++++|++
T Consensus 139 ----------~~g~~-------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 194 (447)
T 3dw8_B 139 ----------EDGRY-------------RDPTTVTTLRVPV-FRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLS 194 (447)
T ss_dssp ------------------------------CCCCCSCCCCE-EEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEE
T ss_pred ----------ccccc-------------cCcccccceEecc-ccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEE
Confidence 00000 0000001111111 11111111223334444789999999999999999999
Q ss_pred ecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccC
Q 015363 251 ADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA 330 (408)
Q Consensus 251 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 330 (408)
|.|+.|++||++........+.+++..+.+|...|++++|+|+++.+|++|+.|+.|++||++++..+...+..+..|..
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 274 (447)
T 3dw8_B 195 ADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPED 274 (447)
T ss_dssp ECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC--
T ss_pred eCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCC
Confidence 99999999999966667776666666788999999999999997689999999999999999998764444577777765
Q ss_pred CCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCceeeeeecccccc
Q 015363 331 PGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRP 387 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~~~~~~~~ 387 (408)
+.....+.+|...|.+++|+|+|++|++++++.|++||+++.++++..+.+|...+.
T Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 275 PSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp ---CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred ccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccc
Confidence 555566677777999999999999999996699999999976799999999986554
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=277.72 Aligned_cols=249 Identities=13% Similarity=0.113 Sum_probs=194.6
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|...|++++|+|++ .|++|+.||+|+|||+.+++.. ......+.+|.
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~-------------------~~~~~~~~~H~---------- 127 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETL-------------------IVSKFCKYEHD---------- 127 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSC-------------------EEEEEEEECCS----------
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCce-------------------eEeeccccCCC----------
Confidence 34577889999999986 5889999999999999887642 11223456788
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|++++|+|+ |++|++|+.|++|++||+.+++....+..+.. .|. ++.|++++..+
T Consensus 128 --~~V~~v~~spd--g~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~--------~V~-------~~~~~~~~~~~---- 184 (344)
T 4gqb_B 128 --DIVSTVSVLSS--GTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA--------QVT-------CVAASPHKDSV---- 184 (344)
T ss_dssp --SCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEE-------EEEECSSCTTE----
T ss_pred --CCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC--------ceE-------EEEecCCCCCc----
Confidence 77999999754 88999999999999999999998888776533 354 68999998643
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceee-ccccccceEEEEeCCC-CCEEEEe-cCCeEEEEeCCCCCce
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIY-AHAHDYHINSISNNSD-GETFISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~-~~~l~~~-~d~~i~iwd~~~~~~~ 267 (408)
+++++.|+.|++|| +...+ +...+ ...+...+.+++|+|+ +++|++| .|+.|++||+++.+ +
T Consensus 185 -------l~s~s~D~~v~iwd-~~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~-~ 249 (344)
T 4gqb_B 185 -------FLSCSEDNRILLWD-TRCPK------PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS-C 249 (344)
T ss_dssp -------EEEEETTSCEEEEE-TTSSS------CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---C
T ss_pred -------eeeecccccccccc-ccccc------eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-E
Confidence 38899999999999 54322 22221 1345567899999996 5678888 89999999999544 3
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDI 347 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 347 (408)
+.. +.+|...|++++|+|++.++|++|+.|++|+|||+++++. ..+.+| .+.|.++
T Consensus 250 ~~~-------~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-----~~~~~H------------~~~V~~v 305 (344)
T 4gqb_B 250 VLS-------SAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-----FRSQAH------------RDFVRDA 305 (344)
T ss_dssp CEE-------EECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-----EEECCC------------SSCEEEE
T ss_pred EEE-------EcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-----EEEcCC------------CCCEEEE
Confidence 332 6789999999999999866899999999999999998754 234445 5889999
Q ss_pred EEccCCC-EEEEeC-CCeEEEEECCC
Q 015363 348 KFARNGR-HILSRD-YMTLKLWDINM 371 (408)
Q Consensus 348 ~~spdg~-~l~s~~-d~~v~~wd~~~ 371 (408)
+|+|+++ +|++|+ |++|++|++.+
T Consensus 306 ~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 306 TWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 9999986 566775 89999999976
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.5e-37 Score=272.74 Aligned_cols=282 Identities=16% Similarity=0.255 Sum_probs=221.1
Q ss_pred cceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 30 EEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
...+|.+.|++++|+|++++||+|+.||+|+|||..++.. ...+..|.
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~-----------------------~~~~~~~~--------- 106 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK-----------------------EHAVTMPC--------- 106 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-----------------------EEEEECSS---------
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCc-----------------------ceEEecCC---------
Confidence 4568999999999999999999999999999999776542 34555666
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc------EEEEeccCCCCcccCCCCCeEeecCCceeeEEccCC
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK------VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANG 183 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 183 (408)
..|.+++|+|+ |.++++++.|+.+++|++.... ....+..+ .+.+. .+.|+|++
T Consensus 107 ---~~v~~~~~sp~--g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h--------~~~v~-------~~~~~~~~ 166 (354)
T 2pbi_B 107 ---TWVMACAYAPS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMH--------TNYLS-------ACSFTNSD 166 (354)
T ss_dssp ---SCCCEEEECTT--SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEEC--------SSCEE-------EEEECSSS
T ss_pred ---CCEEEEEECCC--CCEEEEeeCCCCEEEEEEeccccccccccceeeecc--------CCcEE-------EEEEeCCC
Confidence 66999999765 8899999999999999986432 11112222 22333 68999999
Q ss_pred CeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC--CCCEEEEe-cCCeEEEEe
Q 015363 184 GCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS--DGETFISA-DDLRINLWN 260 (408)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~-~d~~i~iwd 260 (408)
..+ ++++.|+.|++|| +.. .++...+ .+|...|.+++|+| ++++|++| .|+.|++||
T Consensus 167 ~~l------------~t~s~D~~v~lwd-~~~------~~~~~~~-~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd 226 (354)
T 2pbi_B 167 MQI------------LTASGDGTCALWD-VES------GQLLQSF-HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 226 (354)
T ss_dssp SEE------------EEEETTSEEEEEE-TTT------CCEEEEE-ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEE
T ss_pred CEE------------EEEeCCCcEEEEe-CCC------CeEEEEE-cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 887 9999999999999 433 3344444 78999999999987 46899999 999999999
Q ss_pred CCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccc
Q 015363 261 LEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEI 340 (408)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 340 (408)
+++. ++... +..|...|++++|+|++ .+|++|+.|++|++||++++... ..+..+. +
T Consensus 227 ~~~~-~~~~~-------~~~h~~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~~~~~----~~~~~~~----------~ 283 (354)
T 2pbi_B 227 MRSG-QCVQA-------FETHESDVNSVRYYPSG-DAFASGSDDATCRLYDLRADREV----AIYSKES----------I 283 (354)
T ss_dssp TTTC-CEEEE-------ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE----EEECCTT----------C
T ss_pred CCCC-cEEEE-------ecCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEE----EEEcCCC----------c
Confidence 9954 44433 57799999999999999 99999999999999999987543 2222221 1
Q ss_pred cceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeeee---eeceeeec
Q 015363 341 IASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMG---LDNIHTLY 407 (408)
Q Consensus 341 ~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~~~~ 407 (408)
...+.+++|+|+|++|++|+ |+.|++||+.+ ++.+..+.+|......+....++..++ .|...+||
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDYTINVWDVLK-GSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred ccceeEEEEeCCCCEEEEEECCCcEEEEECCC-CceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 24689999999999999985 79999999987 789999999999887777655555443 25555555
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.5e-37 Score=266.95 Aligned_cols=283 Identities=17% Similarity=0.297 Sum_probs=222.5
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|++++||+|+.||.|+||+..+++ ....+.+|.
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~-----------------------~~~~~~~h~---------- 65 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----------------------FEKTISGHK---------- 65 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----------------------EEEEECCCS----------
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-----------------------cchhhccCC----------
Confidence 35799999999999999999999999999999987654 345677888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.+++|+|+ +.+|++++.|+.|++||+.+++....+..+.. .+. ++.|+|++..+
T Consensus 66 --~~v~~~~~~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--------~v~-------~~~~~~~~~~l---- 122 (312)
T 4ery_A 66 --LGISDVAWSSD--SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN--------YVF-------CCNFNPQSNLI---- 122 (312)
T ss_dssp --SCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEE-------EEEECSSSSEE----
T ss_pred --CceEEEEEcCC--CCEEEEECCCCEEEEEECCCCcEEEEEcCCCC--------CEE-------EEEEcCCCCEE----
Confidence 77999999754 88999999999999999999988777665432 344 68999999987
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++++.|+.|++|| +.. ..+...+ ..|...|.+++|+|++++|+++ .|+.|++||+++......
T Consensus 123 --------~s~~~d~~i~iwd-~~~------~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 123 --------VSGSFDESVRIWD-VKT------GKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp --------EEEETTSCEEEEE-TTT------CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred --------EEEeCCCcEEEEE-CCC------CEEEEEe-cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence 9999999999999 433 2333443 7788999999999999999999 999999999995443332
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
. ...+...+..++|+|++ ++|++++.|+.|++||+++++.. ..+.+|... ...+.....
T Consensus 187 ~-------~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~---------~~~~~~~~~ 245 (312)
T 4ery_A 187 L-------IDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCL----KTYTGHKNE---------KYCIFANFS 245 (312)
T ss_dssp E-------CCSSCCCEEEEEECTTS-SEEEEEETTTEEEEEETTTTEEE----EEECSSCCS---------SSCCCEEEE
T ss_pred E-------eccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEE----EEEEecCCc---------eEEEEEEEE
Confidence 2 34566789999999999 99999999999999999988654 555555321 012222333
Q ss_pred ccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeeee-e----eceeeec
Q 015363 350 ARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMG-L----DNIHTLY 407 (408)
Q Consensus 350 spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----d~~~~~~ 407 (408)
.+++.+|++|+ |+.|++||+.+ ++.++.+.+|......+....++..++ . |...++|
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQT-KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEE
T ss_pred eCCCcEEEEECCCCEEEEEECCC-chhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEe
Confidence 46789999986 79999999997 799999999988766655444444433 2 5555555
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.6e-38 Score=283.33 Aligned_cols=244 Identities=17% Similarity=0.292 Sum_probs=204.0
Q ss_pred cceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 30 EEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
...+|.+.|++++|+|++++|++|+.||+|+|||+.+.+ .+..+.+|.
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~-----------------------~~~~~~~h~--------- 192 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-----------------------CIRTMHGHD--------- 192 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC-----------------------EEECCCCCS---------
T ss_pred EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-----------------------eeEEEcCCC---------
Confidence 345699999999999999999999999999999987654 356678888
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..|.+++|+|+ +.+|++++.|++|++||+.++.+...+..+.. .+. .+.++|++..+
T Consensus 193 ---~~V~~v~~~p~--~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~--------~v~-------~~~~~~~g~~l--- 249 (410)
T 1vyh_C 193 ---HNVSSVSIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--------WVR-------MVRPNQDGTLI--- 249 (410)
T ss_dssp ---SCEEEEEECSS--SSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEE-------EEEECTTSSEE---
T ss_pred ---CCEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc--------cEE-------EEEECCCCCEE---
Confidence 77999999765 78999999999999999999988877765532 344 68899999987
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC--------------------CCEEE
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD--------------------GETFI 249 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--------------------~~~l~ 249 (408)
++++.|+.|++|| +.. ..+...+ ..|...|.+++|+|+ +.+|+
T Consensus 250 ---------~s~s~D~~v~vwd-~~~------~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 312 (410)
T 1vyh_C 250 ---------ASCSNDQTVRVWV-VAT------KECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL 312 (410)
T ss_dssp ---------EEEETTSCEEEEE-TTT------CCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEE
T ss_pred ---------EEEcCCCeEEEEE-CCC------CceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEE
Confidence 9999999999999 433 2333443 788999999999996 66899
Q ss_pred Ee-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccc
Q 015363 250 SA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQ 328 (408)
Q Consensus 250 ~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 328 (408)
+| .|+.|++||+++ +.+... +.+|...|++++|+|++ .+|++|+.|+.|++||+++++.. ..+.+|
T Consensus 313 sgs~D~~i~iwd~~~-~~~~~~-------~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~~~~~----~~~~~h 379 (410)
T 1vyh_C 313 SGSRDKTIKMWDVST-GMCLMT-------LVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKNKRCM----KTLNAH 379 (410)
T ss_dssp EEETTSEEEEEETTT-TEEEEE-------EECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTTSCCC----EEEECC
T ss_pred EEeCCCeEEEEECCC-CceEEE-------EECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceE----EEEcCC
Confidence 98 999999999994 444433 57799999999999999 99999999999999999887543 555555
Q ss_pred cCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECC
Q 015363 329 EAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 329 ~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~ 370 (408)
...|.+++|+|++.+|++|+ |++|++|+++
T Consensus 380 ------------~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 380 ------------EHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ------------SSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred ------------CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 47899999999999999985 7999999974
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.2e-37 Score=269.08 Aligned_cols=256 Identities=14% Similarity=0.192 Sum_probs=208.2
Q ss_pred cceeeccceEEEEECCCC-CeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 30 EEVQEVDIISAIEFDKSG-DHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~-~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
...+|.+.|++++|+|++ ++|++|+.|++|++|++.+.... ....+..+.+|.
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~------------------~~~~~~~~~~h~-------- 65 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK------------------FGVPVRSFKGHS-------- 65 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE------------------EEEEEEEEECCS--------
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc------------------ccccceEEeCCc--------
Confidence 345799999999999964 89999999999999998654310 112355788898
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..|.+++|+| ++.+|++++.|++|++||+.+++....+..+.. .+. ++.|+|++..+
T Consensus 66 ----~~v~~~~~s~--dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~--------~v~-------~~~~~~~~~~l-- 122 (319)
T 3frx_A 66 ----HIVQDCTLTA--DGAYALSASWDKTLRLWDVATGETYQRFVGHKS--------DVM-------SVDIDKKASMI-- 122 (319)
T ss_dssp ----SCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSS--------CEE-------EEEECTTSCEE--
T ss_pred ----ccEEEEEECC--CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC--------cEE-------EEEEcCCCCEE--
Confidence 7799999965 488999999999999999999988877766532 354 78999999988
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC------CCEEEEe-cCCeEEEEeC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD------GETFISA-DDLRINLWNL 261 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~------~~~l~~~-~d~~i~iwd~ 261 (408)
++++.|+.|++|| +. ..+...+ .+|...|.+++++|. +..++++ .|+.|++||+
T Consensus 123 ----------~s~s~D~~i~vwd-~~-------~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~ 183 (319)
T 3frx_A 123 ----------ISGSRDKTIKVWT-IK-------GQCLATL-LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL 183 (319)
T ss_dssp ----------EEEETTSCEEEEE-TT-------SCEEEEE-CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEET
T ss_pred ----------EEEeCCCeEEEEE-CC-------CCeEEEE-eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEEC
Confidence 9999999999999 43 2334443 789999999999985 4478888 9999999999
Q ss_pred CCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccccc
Q 015363 262 EISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEII 341 (408)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 341 (408)
+.. +.... +.+|...|.+++|+|++ .+|++|+.|+.|++||+++++.. ..+..+
T Consensus 184 ~~~-~~~~~-------~~~h~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~------------- 237 (319)
T 3frx_A 184 NQF-QIEAD-------FIGHNSNINTLTASPDG-TLIASAGKDGEIMLWNLAAKKAM----YTLSAQ------------- 237 (319)
T ss_dssp TTT-EEEEE-------ECCCCSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEEE----EEEECC-------------
T ss_pred Ccc-hhhee-------ecCCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEE----EEecCC-------------
Confidence 843 33322 57899999999999999 99999999999999999988654 455444
Q ss_pred ceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCceeeee
Q 015363 342 ASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 342 ~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~ 380 (408)
..|.+++|+|++.+|+++.+..+++|+++. +..+..+.
T Consensus 238 ~~v~~~~~sp~~~~la~~~~~~i~v~~~~~-~~~~~~~~ 275 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAATATGIKVFSLDP-QYLVDDLR 275 (319)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEEETT-EEEEEEEC
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEeCc-CeeeeccC
Confidence 579999999999999999887899999986 45555554
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-37 Score=268.66 Aligned_cols=261 Identities=14% Similarity=0.240 Sum_probs=199.1
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
.+|.+.|++++|+|+|++||+|+.|++|+||++.+.. .+.+..+.+|.
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~---------------------~~~~~~l~gH~----------- 53 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET---------------------HKLIDTLTGHE----------- 53 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC---------------------BCCCEEECCCS-----------
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC---------------------cEEEEEEcccc-----------
Confidence 4799999999999999999999999999999987542 12456788998
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE--EEEeccCCCCcccCCCCCeEeecCCceeeEEccC--CCeee
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV--KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN--GGCGE 187 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~l~ 187 (408)
..|.+++|+|..++.+|++++.|++|++||+.+++. ...+..+ ...+. +++|+|+ +..+
T Consensus 54 -~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h--------~~~v~-------~v~~~p~~~g~~l- 116 (297)
T 2pm7_B 54 -GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH--------SASVN-------SVQWAPHEYGPML- 116 (297)
T ss_dssp -SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC--------SSCEE-------EEEECCGGGCSEE-
T ss_pred -CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC--------CCcee-------EEEeCcCCCCcEE-
Confidence 779999997644578999999999999999987743 2222222 22344 7899997 7776
Q ss_pred cccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC-------------CCEEEEe-cC
Q 015363 188 RNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD-------------GETFISA-DD 253 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-------------~~~l~~~-~d 253 (408)
++++.|+.|++|| +...... .... ..+|...|++++|+|+ +++|++| .|
T Consensus 117 -----------~s~s~d~~v~~wd-~~~~~~~----~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D 179 (297)
T 2pm7_B 117 -----------LVASSDGKVSVVE-FKENGTT----SPII-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD 179 (297)
T ss_dssp -----------EEEETTSEEEEEE-BCSSSCB----CCEE-EECCSSCEEEEEECCCC------------CCEEEEEETT
T ss_pred -----------EEEECCCcEEEEE-ecCCCce----eeee-eecccCccceEeecCCcccccccCCCCCCcceEEEEcCC
Confidence 9999999999999 5432111 1122 3789999999999997 4689998 99
Q ss_pred CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCC--CceEEEEeCCCeEEEEEcCCCceecccccccccccCC
Q 015363 254 LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTH--CNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAP 331 (408)
Q Consensus 254 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 331 (408)
++|++||++......... ..+.+|...|.+++|+|++ ..+|++++.|++|+|||++....... ...+.
T Consensus 180 ~~v~lwd~~~~~~~~~~~----~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~-~~~~~----- 249 (297)
T 2pm7_B 180 NLVKIWKYNSDAQTYVLE----STLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWK-KTLLK----- 249 (297)
T ss_dssp SCEEEEEEETTTTEEEEE----EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCE-EEESS-----
T ss_pred CcEEEEEEcCCCceEEEE----EEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccc-eeeee-----
Confidence 999999998554322221 1367899999999999984 37999999999999999987531000 01111
Q ss_pred CCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCC
Q 015363 332 GTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDS 373 (408)
Q Consensus 332 ~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~ 373 (408)
..+|...|.+++|+|+|++|++++ |+.|++|+....+
T Consensus 250 -----~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g 287 (297)
T 2pm7_B 250 -----EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (297)
T ss_dssp -----SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred -----cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCC
Confidence 023357899999999999999985 7999999987543
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.2e-38 Score=279.56 Aligned_cols=287 Identities=17% Similarity=0.279 Sum_probs=206.9
Q ss_pred eeeccceEEEEECCCCCeEEEeec------CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDR------GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDY 105 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~ 105 (408)
..|...|++++|||||++||+|+. |+.|++|+..++.. ...+.....+|.
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~-------------------~~~~~~~~~~~~----- 94 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP-------------------NESLCTAGVQTE----- 94 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC----------------------CGGGCSEEEECS-----
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCc-------------------ceeEecccCCCC-----
Confidence 469999999999999999999997 77899998766542 122233445566
Q ss_pred ccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 106 LKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 106 ~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
..|++++|+|+ + .+++++.||+|++||+.+++.......... ...+.|. +++|+|+++.
T Consensus 95 -------~~V~~~~~s~d--~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~----~h~~~V~-------~v~~spdg~~ 153 (357)
T 4g56_B 95 -------AGVTDVAWVSE--K-GILVASDSGAVELWEILEKESLLVNKFAKY----EHDDIVK-------TLSVFSDGTQ 153 (357)
T ss_dssp -------SCEEEEEEETT--T-EEEEEETTSCEEEC--------CCCCEEEC----CCSSCEE-------EEEECSSSSE
T ss_pred -------CCEEEEEEcCC--C-CEEEEECCCEEEEeeccccceeEEEeeccC----CCCCCEE-------EEEECCCCCE
Confidence 77999999764 5 577889999999999988765433221110 0123454 7899999999
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCeEEEEeCCC
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLRINLWNLEI 263 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~iwd~~~ 263 (408)
+ ++++.|+.|++|| +.. .++...+ .+|...|++++|+|++. +++++ .|+.|++||+++
T Consensus 154 l------------~sgs~dg~v~iwd-~~~------~~~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 154 A------------VSGGKDFSVKVWD-LSQ------KAVLKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp E------------EEEETTSCEEEEE-TTT------TEEEEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred E------------EEEeCCCeEEEEE-CCC------CcEEEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 8 9999999999999 432 3344444 78999999999999875 67777 899999999985
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccce
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIAS 343 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 343 (408)
....... ....+...+++++|+|++..+|++|+.|+.|++||+++++.. ..+.+| ...
T Consensus 214 ~~~~~~~------~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~----~~~~~~------------~~~ 271 (357)
T 4g56_B 214 PKPATRI------DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA----QTSAVH------------SQN 271 (357)
T ss_dssp SSCBCBC------CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC----EEECCC------------SSC
T ss_pred Cceeeee------eeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe----EEEecc------------cee
Confidence 5433221 245577889999999987689999999999999999987543 555555 478
Q ss_pred eEEEEEccCC-CEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEe-cCCCeee---eeeceeeec
Q 015363 344 ISDIKFARNG-RHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMH-SSKNYFM---GLDNIHTLY 407 (408)
Q Consensus 344 i~~~~~spdg-~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~d~~~~~~ 407 (408)
|.+++|+|++ ++|++|+ |++|+|||+++ +++++.+ +|......+.. +.++..+ +.|...++|
T Consensus 272 v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASISEDCTVAVLDADF-SEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTS-CEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEECCC-CcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 9999999987 5788885 79999999987 6666554 78887666653 3455544 235554444
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=271.10 Aligned_cols=243 Identities=14% Similarity=0.191 Sum_probs=204.2
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|...|.+++|++++.++++|+.|++|+|||+.+++ .+..+..|.
T Consensus 76 l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~-----------------------~~~~~~~~~---------- 122 (321)
T 3ow8_A 76 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK-----------------------QIKSIDAGP---------- 122 (321)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----------------------EEEEEECCT----------
T ss_pred eccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC-----------------------EEEEEeCCC----------
Confidence 45799999999999999999999999999999988765 245566666
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..+.+++|+|+ +++|++++.|+.|++|++.+++....+..+.. .+. +++|+|+++.+
T Consensus 123 --~~~~~~~~spd--g~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~--------~v~-------~~~~spdg~~l---- 179 (321)
T 3ow8_A 123 --VDAWTLAFSPD--SQYLATGTHVGKVNIFGVESGKKEYSLDTRGK--------FIL-------SIAYSPDGKYL---- 179 (321)
T ss_dssp --TCCCCEEECTT--SSEEEEECTTSEEEEEETTTCSEEEEEECSSS--------CEE-------EEEECTTSSEE----
T ss_pred --ccEEEEEECCC--CCEEEEEcCCCcEEEEEcCCCceeEEecCCCc--------eEE-------EEEECCCCCEE----
Confidence 66899999755 88999999999999999999887766554422 233 68999999998
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++++.|+.|++|| +.. .++...+ .+|...|++++|+|++++|+++ .|+.|++||++... ...
T Consensus 180 --------asg~~dg~i~iwd-~~~------~~~~~~~-~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-~~~ 242 (321)
T 3ow8_A 180 --------ASGAIDGIINIFD-IAT------GKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-LAG 242 (321)
T ss_dssp --------EEEETTSCEEEEE-TTT------TEEEEEE-CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC-EEE
T ss_pred --------EEEcCCCeEEEEE-CCC------CcEEEEE-cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc-eeE
Confidence 9999999999999 432 3334443 7899999999999999999999 89999999998443 333
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
. +.+|...|.+++|+|++ .+|++++.|++|++||+++++.+ ..+.+| ...|.+++|
T Consensus 243 ~-------~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~----~~~~~h------------~~~v~~v~~ 298 (321)
T 3ow8_A 243 T-------LSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRTCV----HTFFDH------------QDQVWGVKY 298 (321)
T ss_dssp E-------ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE----EEECCC------------SSCEEEEEE
T ss_pred E-------EcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCEEE----EEEcCC------------CCcEEEEEE
Confidence 2 67899999999999999 89999999999999999988654 555555 478999999
Q ss_pred ccCCCEEEEeC-CCeEEEEECC
Q 015363 350 ARNGRHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 350 spdg~~l~s~~-d~~v~~wd~~ 370 (408)
+|++++|++++ |+.|++||..
T Consensus 299 s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 299 NGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CTTSSEEEEEETTCCEEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999985 7999999973
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-37 Score=276.40 Aligned_cols=291 Identities=14% Similarity=0.244 Sum_probs=209.3
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccc------cc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEF------DY 105 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~------~~ 105 (408)
..|.+.|+|++|+|+|++||+|+ ++.++||++.++... ..+..|.... ..
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~-----------------------~~l~~~~~~~~~~~~~~~ 116 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLV-----------------------ARLSDDSAANKDPENLNT 116 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEE-----------------------EEECC-------------
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEE-----------------------EEecCccccccccccccc
Confidence 46999999999999999999987 679999998876531 1222221000 00
Q ss_pred ccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 106 LKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 106 ~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
.........|++++|+| +|++|++++.|++|++||+.+++....+..+.. .+. +++|+|++..
T Consensus 117 ~~~~~~~~~v~~v~~s~--dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~--------~v~-------~~~~~p~~~~ 179 (393)
T 1erj_A 117 SSSPSSDLYIRSVCFSP--DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ--------DIY-------SLDYFPSGDK 179 (393)
T ss_dssp ----CCCCBEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEE-------EEEECTTSSE
T ss_pred cccCCCceeEEEEEECC--CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCC--------CEE-------EEEEcCCCCE
Confidence 00001113599999975 488999999999999999999988777766532 354 7899999998
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEEEEeCCC
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRINLWNLEI 263 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~iwd~~~ 263 (408)
+ ++++.|+.|++|| +.. ..+...+ .+...+.+++|+| ++++|+++ .|+.|++||+++
T Consensus 180 l------------~s~s~d~~v~iwd-~~~------~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~ 238 (393)
T 1erj_A 180 L------------VSGSGDRTVRIWD-LRT------GQCSLTL--SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 238 (393)
T ss_dssp E------------EEEETTSEEEEEE-TTT------TEEEEEE--ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT
T ss_pred E------------EEecCCCcEEEEE-CCC------CeeEEEE--EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 8 9999999999999 433 2222222 3556799999999 88999999 999999999985
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccce
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIAS 343 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 343 (408)
. .....+........+|...|++++|+|++ ++|++|+.|+.|++||+++.... ..............+.+|...
T Consensus 239 ~-~~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~~~----~~~~~~~~~~~~~~~~~h~~~ 312 (393)
T 1erj_A 239 G-FLVERLDSENESGTGHKDSVYSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNK----SDSKTPNSGTCEVTYIGHKDF 312 (393)
T ss_dssp C-CEEEEEC------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEEC-------------------CEEEEEECCSSC
T ss_pred C-cEEEeecccccCCCCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEECCCCCCc----ccccCCCCCcceEEEecccCc
Confidence 4 33333221112236789999999999999 99999999999999999875432 111111111223345667789
Q ss_pred eEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEe
Q 015363 344 ISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMH 391 (408)
Q Consensus 344 i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~ 391 (408)
|.+++|+|++.+|++|+ |+.|++||+.+ ++++..+.+|......+..
T Consensus 313 v~~~~~~~~~~~l~sgs~D~~v~iwd~~~-~~~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 313 VLSVATTQNDEYILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSVISVAV 360 (393)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCC-CeEEEEECCCCCCEEEEEe
Confidence 99999999999999985 79999999998 7999999999887666553
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=273.01 Aligned_cols=271 Identities=12% Similarity=0.222 Sum_probs=199.0
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
.+|.+.|++++|+|++++||+|+.|++|+||+..... .+.+..+.+|.
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~---------------------~~~~~~~~~h~----------- 105 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD---------------------FECVTTLEGHE----------- 105 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC----------------------EEEEEEECCCS-----------
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC---------------------eEEEEEccCCC-----------
Confidence 4699999999999999999999999999999987653 22456788898
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE---EEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV---KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..|.+++|+|+ +.+|++++.|++|++||+.++.. ...+..+ ...+. .++|+|++..+
T Consensus 106 -~~v~~v~~sp~--~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h--------~~~v~-------~~~~~p~~~~l-- 165 (345)
T 3fm0_A 106 -NEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH--------TQDVK-------HVVWHPSQELL-- 165 (345)
T ss_dssp -SCEEEEEECTT--SSEEEEEETTSCEEEEEECTTSCEEEEEEECCC--------CSCEE-------EEEECSSSSCE--
T ss_pred -CCceEEEEeCC--CCEEEEEECCCeEEEEECCCCCCeEEEEEecCc--------CCCeE-------EEEECCCCCEE--
Confidence 77999999765 88999999999999999987642 2333332 22344 68999999987
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCce
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~ 267 (408)
++++.|+.|++|+ ....+. .+... +.+|...|++++|+|++++|+++ .|++|++||.......
T Consensus 166 ----------~s~s~d~~i~~w~-~~~~~~----~~~~~-~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 166 ----------ASASYDDTVKLYR-EEEDDW----VCCAT-LEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp ----------EEEETTSCEEEEE-EETTEE----EEEEE-ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred ----------EEEeCCCcEEEEE-ecCCCE----EEEEE-ecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 9999999999999 543211 12233 37899999999999999999999 9999999997532211
Q ss_pred eeEeec--C-----CCccc-CCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccc
Q 015363 268 FNIVDV--K-----PANME-DLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTE 339 (408)
Q Consensus 268 ~~~~~~--~-----~~~~~-~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (408)
..+... . ...+. .|...|.+++|+|++ ..|++++.|+.|++|+.........+...+..+ ...+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~-------~~~~ 301 (345)
T 3fm0_A 230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQPTFSLTAH-------LHQA 301 (345)
T ss_dssp TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEE-------ETTS
T ss_pred ccceeeccCCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEee-------eccc
Confidence 000000 0 00122 378899999999999 899999999999999988654221111111111 1346
Q ss_pred ccceeEEEEEccCC-CEEEEeC-CCeEEEEECCCCCCceeee
Q 015363 340 IIASISDIKFARNG-RHILSRD-YMTLKLWDINMDSGPVATF 379 (408)
Q Consensus 340 h~~~i~~~~~spdg-~~l~s~~-d~~v~~wd~~~~~~~~~~~ 379 (408)
|...|.+++|+|++ .+||+|+ |++|++|++.+ ++.+..+
T Consensus 302 h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~-~~~~~~~ 342 (345)
T 3fm0_A 302 HSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR-PEGLHHH 342 (345)
T ss_dssp SSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--------
T ss_pred ccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC-CCCcccc
Confidence 67899999999998 4899985 79999999987 4544433
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=273.06 Aligned_cols=293 Identities=13% Similarity=0.203 Sum_probs=206.5
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|...|.+++|+|||++|++++ |+++++||.......... ..|......... .+
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~------------~~~~~~~~~~~~------------~~ 81 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPC------------AAPNEGFCSAGV------------QT 81 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGG------------GTTCGGGCSEEE------------EE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeecccc------------ccCCcceeeeee------------cc
Confidence 45778899999999999999887 778888874321100000 000111111112 22
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
+..|.+++|+|+ + .|++|+.||+|++||+.+++........... ..+.|. +++|+|+|+.+
T Consensus 82 ~~~v~~~~~s~d--~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~----H~~~V~-------~v~~spdg~~l----- 142 (344)
T 4gqb_B 82 EAGVADLTWVGE--R-GILVASDSGAVELWELDENETLIVSKFCKYE----HDDIVS-------TVSVLSSGTQA----- 142 (344)
T ss_dssp SSCEEEEEEETT--T-EEEEEETTSEEEEEEECTTSSCEEEEEEEEC----CSSCEE-------EEEECTTSSEE-----
T ss_pred CCCEEEEEEeCC--C-eEEEEECCCEEEEEeccCCCceeEeeccccC----CCCCEE-------EEEECCCCCEE-----
Confidence 267999999764 4 7889999999999999988755443321100 023455 79999999998
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCeEEEEeCCCCCceee
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++++.|+.|++|| +.. .++...+ .+|...|++++|+|++. +|+++ .|++|++||+++.+....
T Consensus 143 -------~sgs~d~~i~iwd-~~~------~~~~~~~-~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~ 207 (344)
T 4gqb_B 143 -------VSGSKDICIKVWD-LAQ------QVVLSSY-RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQ 207 (344)
T ss_dssp -------EEEETTSCEEEEE-TTT------TEEEEEE-CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEE
T ss_pred -------EEEeCCCeEEEEE-CCC------CcEEEEE-cCcCCceEEEEecCCCCCceeeeccccccccccccccceeee
Confidence 9999999999999 433 3444554 88999999999999984 77888 899999999995544333
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
+ ....+...+.+++|+|++.++|++|+.|+.|++||+++++.+ ..+.+| ...|.+++|
T Consensus 208 ~------~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~----~~~~~h------------~~~v~~v~f 265 (344)
T 4gqb_B 208 I------GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV----LSSAVH------------SQCVTGLVF 265 (344)
T ss_dssp C------C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC----EEEECC------------SSCEEEEEE
T ss_pred e------ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE----EEEcCC------------CCCEEEEEE
Confidence 2 134456678999999977589999999999999999988554 566666 578999999
Q ss_pred ccCC-CEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEe-cCCCeeee---eeceeeec
Q 015363 350 ARNG-RHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMH-SSKNYFMG---LDNIHTLY 407 (408)
Q Consensus 350 spdg-~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~d~~~~~~ 407 (408)
+|++ ++|++|+ |++|+|||+++ ++ +..+.+|......+.. +....+++ .|....+|
T Consensus 266 sp~g~~~lasgs~D~~i~vwd~~~-~~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w 327 (344)
T 4gqb_B 266 SPHSVPFLASLSEDCSLAVLDSSL-SE-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHH 327 (344)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTC-CE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred ccCCCeEEEEEeCCCeEEEEECCC-Cc-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEE
Confidence 9998 5788885 79999999987 45 4567889888766653 33344442 25544443
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.8e-36 Score=265.92 Aligned_cols=257 Identities=14% Similarity=0.203 Sum_probs=200.3
Q ss_pred ceeeccceEEEEE-----CC-CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccc
Q 015363 31 EVQEVDIISAIEF-----DK-SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFD 104 (408)
Q Consensus 31 ~~~h~~~V~~~~~-----s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~ 104 (408)
..+|.+.|++++| ++ ++++||+|+.|++|+|||+...+... ........+.+|.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~----------------~~~~~~~~l~~h~---- 76 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNG----------------YFGIPHKALTGHN---- 76 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSS----------------BSEEEEEEECCCS----
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccc----------------ccccccchhccCC----
Confidence 4579999999999 77 89999999999999999987653210 0112345678888
Q ss_pred cccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCC
Q 015363 105 YLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG 184 (408)
Q Consensus 105 ~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 184 (408)
..|.+++|+|+ +.++++++.|++|++||+++++....+..+. +.+. +++|+|+++
T Consensus 77 --------~~V~~~~~~~~--~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~--------~~v~-------~v~~sp~~~ 131 (343)
T 2xzm_R 77 --------HFVSDLALSQE--NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ--------SEVY-------SVAFSPDNR 131 (343)
T ss_dssp --------SCEEEEEECSS--TTEEEEEETTSEEEEEETTSSCEEEEEECCC--------SCEE-------EEEECSSTT
T ss_pred --------CceEEEEECCC--CCEEEEEcCCCcEEEEECCCCcEEEEEcCCC--------CcEE-------EEEECCCCC
Confidence 77999999755 7899999999999999999998877766553 2355 789999999
Q ss_pred eeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC----------CEEEEe-cC
Q 015363 185 CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG----------ETFISA-DD 253 (408)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~----------~~l~~~-~d 253 (408)
.+ ++++.|+.|++|| +....... ......|...|.+++|+|++ .+|+++ .|
T Consensus 132 ~l------------~s~~~d~~i~~wd-~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d 193 (343)
T 2xzm_R 132 QI------------LSAGAEREIKLWN-ILGECKFS-----SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD 193 (343)
T ss_dssp EE------------EEEETTSCEEEEE-SSSCEEEE-----CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT
T ss_pred EE------------EEEcCCCEEEEEe-ccCCceee-----eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC
Confidence 88 9999999999999 43211100 00024788899999999987 689988 99
Q ss_pred CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCC
Q 015363 254 LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGT 333 (408)
Q Consensus 254 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 333 (408)
+.|++||.. ...... +.+|...|.+++|+|++ ++|++|+.|+.|++||++..... ...+..
T Consensus 194 ~~i~iwd~~--~~~~~~-------~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~~~~~~---~~~~~~------ 254 (343)
T 2xzm_R 194 GRLKVWNTN--FQIRYT-------FKAHESNVNHLSISPNG-KYIATGGKDKKLLIWDILNLTYP---QREFDA------ 254 (343)
T ss_dssp SEEEEEETT--TEEEEE-------EECCSSCEEEEEECTTS-SEEEEEETTCEEEEEESSCCSSC---SEEEEC------
T ss_pred CEEEEEcCC--CceeEE-------EcCccccceEEEECCCC-CEEEEEcCCCeEEEEECCCCccc---ceeecC------
Confidence 999999954 333322 56799999999999999 99999999999999999654321 122211
Q ss_pred ccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCcee
Q 015363 334 RSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVA 377 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~ 377 (408)
...|.+++|+|++.+|+++.|+.|++||+.+ ++...
T Consensus 255 -------~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~-~~~~~ 290 (343)
T 2xzm_R 255 -------GSTINQIAFNPKLQWVAVGTDQGVKIFNLMT-QSKAP 290 (343)
T ss_dssp -------SSCEEEEEECSSSCEEEEEESSCEEEEESSS-CCSCS
T ss_pred -------CCcEEEEEECCCCCEEEEECCCCEEEEEeCC-CCCCc
Confidence 2469999999999999988888999999986 44433
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.9e-37 Score=272.73 Aligned_cols=256 Identities=13% Similarity=0.125 Sum_probs=190.2
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|++. +++++.||+|+|||+.+++.. ........+|.
T Consensus 90 ~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~-------------------~~~~~~~~~h~---------- 139 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESL-------------------LVNKFAKYEHD---------- 139 (357)
T ss_dssp EEECSSCEEEEEEETTTE-EEEEETTSCEEEC---------------------------CCCCEEECCCS----------
T ss_pred cCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeecccccee-------------------EEEeeccCCCC----------
Confidence 457899999999999986 556788999999999876531 01112345677
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|++++|+|+ +++|++++.|++|++||+.+++....+..+.. .+. +++|++++..+
T Consensus 140 --~~V~~v~~spd--g~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~--------~v~-------~v~~s~~~~~~---- 196 (357)
T 4g56_B 140 --DIVKTLSVFSD--GTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS--------EVN-------CVAACPGKDTI---- 196 (357)
T ss_dssp --SCEEEEEECSS--SSEEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEE-------EEEECTTCSSC----
T ss_pred --CCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC--------CEE-------EEEEccCCCce----
Confidence 77999999755 88999999999999999999988887766532 344 68899988643
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC-CEEEEe-cCCeEEEEeCCCCCcee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG-ETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
+++++.|+.|++|| +...+.... .....|...+++++|+|++ .+|++| .|+.|++||+++.. ..
T Consensus 197 -------~~s~~~dg~v~~wd-~~~~~~~~~-----~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~-~~ 262 (357)
T 4g56_B 197 -------FLSCGEDGRILLWD-TRKPKPATR-----IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD-SA 262 (357)
T ss_dssp -------EEEEETTSCEEECC-TTSSSCBCB-----CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-GC
T ss_pred -------eeeeccCCceEEEE-CCCCceeee-----eeeccccccccchhhhhcccceEEEeecccceeEEECCCCc-Ee
Confidence 38899999999999 543222111 1124566789999999985 678888 89999999999544 33
Q ss_pred eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEE
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIK 348 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 348 (408)
.. +..|...|++++|+|++.++||+|+.|++|+|||+++++.. . ..+| ...|++++
T Consensus 263 ~~-------~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~----~-~~~H------------~~~V~~va 318 (357)
T 4g56_B 263 QT-------SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF----R-DLSH------------RDFVTGVA 318 (357)
T ss_dssp EE-------ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE----E-ECCC------------SSCEEEEE
T ss_pred EE-------EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe----E-ECCC------------CCCEEEEE
Confidence 32 57789999999999998678999999999999999988543 2 2234 57899999
Q ss_pred Ecc-CCCEEEEeC-CCeEEEEECCCCCCcee
Q 015363 349 FAR-NGRHILSRD-YMTLKLWDINMDSGPVA 377 (408)
Q Consensus 349 ~sp-dg~~l~s~~-d~~v~~wd~~~~~~~~~ 377 (408)
|+| |+.+|++++ |++|++|++...++...
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~ 349 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEGRTEN 349 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC-------
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCcccc
Confidence 999 899999985 79999999987544433
No 19
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.8e-37 Score=271.09 Aligned_cols=261 Identities=15% Similarity=0.240 Sum_probs=194.4
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|+|++||+|+.|++|+|||+.++.. ..+..+.+|.
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~---------------------~~~~~l~gH~---------- 57 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ---------------------ILIADLRGHE---------- 57 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE---------------------EEEEEEECCS----------
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc---------------------EEEEEEcCCC----------
Confidence 357999999999999999999999999999999876531 1345788998
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE--EEEeccCCCCcccCCCCCeEeecCCceeeEEccC--CCee
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV--KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN--GGCG 186 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~l 186 (408)
..|.+++|+|..++.+|++++.|++|++||+++++. ...+..+. +.+. +++|+|+ +..+
T Consensus 58 --~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~--------~~V~-------~v~~~p~~~g~~l 120 (316)
T 3bg1_A 58 --GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHD--------SSVN-------SVCWAPHDYGLIL 120 (316)
T ss_dssp --SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCS--------SCCC-------EEEECCTTTCSCE
T ss_pred --ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCC--------CceE-------EEEECCCCCCcEE
Confidence 779999997644477999999999999999998743 33333222 2233 6899998 6666
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC-----------------CCEEE
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD-----------------GETFI 249 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-----------------~~~l~ 249 (408)
++++.|+.|++|+ +..... ...... ..+|...+.+++|+|+ +.+|+
T Consensus 121 ------------asgs~D~~i~lwd-~~~~~~---~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 183 (316)
T 3bg1_A 121 ------------ACGSSDGAISLLT-YTGEGQ---WEVKKI-NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFA 183 (316)
T ss_dssp ------------EEECSSSCEEEEE-ECSSSC---EEECCB-TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEE
T ss_pred ------------EEEcCCCCEEEEe-cCCCCC---cceeee-eccccCCcceEEEccccCCccccccccccCccccceEE
Confidence 9999999999999 543211 011122 3678889999999997 46899
Q ss_pred Ee-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCC---CceEEEEeCCCeEEEEEcCCCceeccccccc
Q 015363 250 SA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTH---CNMLAYSSSKGSIRLIDMRQSALCDTHSKLF 325 (408)
Q Consensus 250 ~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 325 (408)
+| .|+.|++||++........ ..+.+|...|++++|+|++ ..+|++++.|++|++||++...........+
T Consensus 184 sgs~D~~v~lWd~~~~~~~~~~-----~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~ 258 (316)
T 3bg1_A 184 SGGCDNLIKLWKEEEDGQWKEE-----QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL 258 (316)
T ss_dssp CCBTTSBCCEEEECTTSCEEEE-----ECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE
T ss_pred EecCCCeEEEEEeCCCCcccee-----eecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh
Confidence 98 8999999999743321111 1367899999999999985 2689999999999999998632100001222
Q ss_pred ccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCC
Q 015363 326 EEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDS 373 (408)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~ 373 (408)
. +|...|.+++|+|++++|++++ |+.|++|+....+
T Consensus 259 ~------------~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g 295 (316)
T 3bg1_A 259 H------------KFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG 295 (316)
T ss_dssp E------------ECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTS
T ss_pred h------------cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCC
Confidence 2 3357899999999999999985 7999999987533
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-36 Score=289.91 Aligned_cols=287 Identities=15% Similarity=0.176 Sum_probs=213.2
Q ss_pred cceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 30 EEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
...+|.+.|++++|+|+|++||+|+.||+|+|||+.+++.. ....+.+|.
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~---------------------~~~~~~~~~--------- 103 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI---------------------LKTTIPVFS--------- 103 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC---------------------EEEEEECSS---------
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce---------------------eeEeecccC---------
Confidence 34579999999999999999999999999999998654321 334677888
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCC----CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTND----KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
..|.+++|+|+ +++|++++.+ +.|++||. ++....+..+ .+.+. +++|+|++..
T Consensus 104 ---~~v~~v~fs~d--g~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh--------~~~v~-------~v~f~p~~~~ 161 (611)
T 1nr0_A 104 ---GPVKDISWDSE--SKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQ--------ARAMN-------SVDFKPSRPF 161 (611)
T ss_dssp ---SCEEEEEECTT--SCEEEEEECCSSCSEEEEETTT--CCBCBCCCCC--------SSCEE-------EEEECSSSSC
T ss_pred ---CceEEEEECCC--CCEEEEEECCCCceeEEEEeeC--CCCcceecCC--------CCCce-------EEEECCCCCe
Confidence 77999999754 8899988865 47888874 3333333332 23454 7899999874
Q ss_pred -eecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCC
Q 015363 186 -GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEI 263 (408)
Q Consensus 186 -l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~ 263 (408)
+ ++++.|+.|++|| ... .++...+ .+|...|++++|+|++++|+++ .|++|++||+.+
T Consensus 162 ~l------------~s~s~D~~v~lwd-~~~------~~~~~~l-~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 162 RI------------ISGSDDNTVAIFE-GPP------FKFKSTF-GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp EE------------EEEETTSCEEEEE-TTT------BEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EE------------EEEeCCCeEEEEE-CCC------CeEeeee-ccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 5 9999999999999 322 3344444 7899999999999999999999 999999999984
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceeccccccccccc--------------
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQE-------------- 329 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-------------- 329 (408)
+. ....+........+|...|.+++|+|++ ++|++++.|++|++||+++++.. ..+..+.
T Consensus 222 g~-~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 295 (611)
T 1nr0_A 222 GT-KTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVE----KTIPVGTRIEDQQLGIIWTKQ 295 (611)
T ss_dssp CC-EEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE----EEEECCSSGGGCEEEEEECSS
T ss_pred Cc-EeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcee----eeecCCCCccceeEEEEEcCC
Confidence 43 3333210001122799999999999999 99999999999999999987543 2221110
Q ss_pred -----------------CCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeee-eecccccceEE
Q 015363 330 -----------------APGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATF-QVHEHLRPKVM 390 (408)
Q Consensus 330 -----------------~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~-~~~~~~~~~~~ 390 (408)
.......+.+|...|.+++|+|||++|++++ |++|++||+.+ +.....+ .+|......+.
T Consensus 296 ~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~-~~~~~~~~~~h~~~v~~~~ 374 (611)
T 1nr0_A 296 ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST-GISNRVFPDVHATMITGIK 374 (611)
T ss_dssp CEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEECSSCSCSSCEEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC-CceeeecccCCcceEEEEE
Confidence 0011234567889999999999999999985 79999999997 5666655 55666555554
Q ss_pred ecCCC
Q 015363 391 HSSKN 395 (408)
Q Consensus 391 ~~~~~ 395 (408)
....+
T Consensus 375 ~s~~~ 379 (611)
T 1nr0_A 375 TTSKG 379 (611)
T ss_dssp ECTTS
T ss_pred ECCCC
Confidence 43333
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.1e-37 Score=276.66 Aligned_cols=292 Identities=16% Similarity=0.251 Sum_probs=217.3
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|++++||+|+.||+|+|||..+++ ....+..|.
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~-----------------------~~~~~~~h~---------- 108 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ-----------------------KTHAIKLHC---------- 108 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-----------------------EEEEEECCC----------
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------------------cceEEecCC----------
Confidence 45799999999999999999999999999999987664 345677887
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEE-------EEeccCCCCcccCCCCCeEeecCCceeeEEccCC
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVK-------KVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANG 183 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 183 (408)
..|.+++|+|+ |.+|++++.|+.+++|++.+.... ..+..+ .+.+. .+.|.|++
T Consensus 109 --~~v~~~~~s~~--g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh--------~~~v~-------~~~~~~~~ 169 (380)
T 3iz6_a 109 --PWVMECAFAPN--GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGH--------KGYAS-------SCQYVPDQ 169 (380)
T ss_dssp --TTCCCCEECTT--SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCC--------SSCCC-------CCBCCSSS
T ss_pred --CCEEEEEECCC--CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCC--------CcceE-------EEEEecCC
Confidence 67999999754 889999999999999999754211 111111 12222 56777764
Q ss_pred C-eeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEEEEe
Q 015363 184 G-CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRINLWN 260 (408)
Q Consensus 184 ~-~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~iwd 260 (408)
. .+ ++++.|+.|++|| +......... ...+..+|...|.+++|++ ++++|++| .|+.|++||
T Consensus 170 ~~~l------------~s~s~D~~i~~wd-~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd 234 (380)
T 3iz6_a 170 ETRL------------ITGSGDQTCVLWD-VTTGQRISIF--GSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWD 234 (380)
T ss_dssp SSCE------------EEECTTSCEEEEC-TTTCCEEEEE--CCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEE
T ss_pred CCEE------------EEECCCCcEEEEE-cCCCcEEEEe--ecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEE
Confidence 3 34 8999999999999 5432211110 0111257889999999987 78899999 999999999
Q ss_pred CCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccc
Q 015363 261 LEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEI 340 (408)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 340 (408)
++........ +.+|...|++++|+|++ .+|++|+.|++|++||++++... ..+..+... ...+
T Consensus 235 ~~~~~~~~~~-------~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~~~~~~~----~~~~~~~~~-----~~~~ 297 (380)
T 3iz6_a 235 LRITSRAVRT-------YHGHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDMRTGHQL----QVYNREPDR-----NDNE 297 (380)
T ss_dssp TTTTCCCCEE-------ECCCSSCCCEEEECTTS-SEEEEECSSSCEEEEETTTTEEE----EEECCCCSS-----SCCS
T ss_pred CCCCCcceEE-------ECCcCCCeEEEEEecCC-CeEEEEcCCCeEEEEECCCCcEE----EEecccccc-----cccc
Confidence 9855555443 67899999999999999 99999999999999999998654 333332110 1112
Q ss_pred cceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeee----eecccccceEEecCCCeeeee---eceeeec
Q 015363 341 IASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATF----QVHEHLRPKVMHSSKNYFMGL---DNIHTLY 407 (408)
Q Consensus 341 ~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---d~~~~~~ 407 (408)
...|.+++|+|+|++|++|+ |+.|++||+.+ ++.+..+ .+|......+....++..++. |...++|
T Consensus 298 ~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp SCSCSEEEECSSSSEEEEECTTSCEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred cCceEEEEECCCCCEEEEEECCCCEEEEECCC-CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 34589999999999999995 79999999987 6777666 678888777776555554432 4444444
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.4e-36 Score=266.79 Aligned_cols=245 Identities=18% Similarity=0.278 Sum_probs=201.4
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|...|.+++|+|++++|++|+.|+.|++|++.+... ..+....+.+|.
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~-------------------~~~~~~~~~~h~----------- 143 (340)
T 1got_B 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG-------------------NVRVSRELAGHT----------- 143 (340)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB-------------------SCEEEEEEECCS-----------
T ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC-------------------cceeEEEecCCC-----------
Confidence 45888999999999999999999999999999876532 223455678888
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
..|.++.|+|+ + .+++++.|++|++||+.+++....+..+. +.+. +++|+|++..+
T Consensus 144 -~~v~~~~~~~~--~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~--------~~v~-------~~~~~~~~~~l----- 199 (340)
T 1got_B 144 -GYLSCCRFLDD--N-QIVTSSGDTTCALWDIETGQQTTTFTGHT--------GDVM-------SLSLAPDTRLF----- 199 (340)
T ss_dssp -SCEEEEEEEET--T-EEEEEETTSCEEEEETTTTEEEEEECCCS--------SCEE-------EEEECTTSSEE-----
T ss_pred -ccEEEEEECCC--C-cEEEEECCCcEEEEECCCCcEEEEEcCCC--------CceE-------EEEECCCCCEE-----
Confidence 77999999764 4 69999999999999999998877776543 2344 78999999987
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeE
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNI 270 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~ 270 (408)
++++.|+.|++|| +.. ..+...+ .+|...|++++|+|++++|+++ .|++|++||++.. +....
T Consensus 200 -------~sg~~d~~v~~wd-~~~------~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~ 263 (340)
T 1got_B 200 -------VSGACDASAKLWD-VRE------GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD-QELMT 263 (340)
T ss_dssp -------EEEETTSCEEEEE-TTT------CSEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEE
T ss_pred -------EEEeCCCcEEEEE-CCC------CeeEEEE-cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-cEEEE
Confidence 9999999999999 433 2344444 7899999999999999999999 9999999999944 33332
Q ss_pred eecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEc
Q 015363 271 VDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFA 350 (408)
Q Consensus 271 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 350 (408)
+. ...+...|++++|+|++ .+|++|+.|+.|++||+.++... ..+.+| ...|.+++|+
T Consensus 264 ~~-----~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~~~----~~~~~h------------~~~v~~~~~s 321 (340)
T 1got_B 264 YS-----HDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKADRA----GVLAGH------------DNRVSCLGVT 321 (340)
T ss_dssp EC-----CTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE----EEEECC------------SSCEEEEEEC
T ss_pred Ec-----cCCcccceEEEEECCCC-CEEEEECCCCeEEEEEcccCcEe----eEeecC------------CCcEEEEEEc
Confidence 21 23344579999999999 99999999999999999887654 555555 5789999999
Q ss_pred cCCCEEEEeC-CCeEEEEE
Q 015363 351 RNGRHILSRD-YMTLKLWD 368 (408)
Q Consensus 351 pdg~~l~s~~-d~~v~~wd 368 (408)
|+|.+|++|+ |+.|++||
T Consensus 322 ~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 322 DDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEcCCccEEecC
Confidence 9999999986 79999997
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=268.96 Aligned_cols=302 Identities=14% Similarity=0.158 Sum_probs=212.7
Q ss_pred eeecc-ceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 32 VQEVD-IISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 32 ~~h~~-~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
.+|.+ .|++++|+|+|++||+|+.|++|+||++.++... .......+|.
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~--------------------~~~~~~~~h~---------- 61 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI--------------------CKSVLSEGHQ---------- 61 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE--------------------EEEEECSSCS----------
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce--------------------eeeeeccccC----------
Confidence 46777 8999999999999999999999999998765320 0111235777
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEE--EEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVK--KVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..|.+++|+|+ +.+|++++.|+++++|++..+... ..+..+ .+.|. +++|+|+++.+
T Consensus 62 --~~v~~~~~sp~--g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h--------~~~v~-------~v~~sp~~~~l-- 120 (345)
T 3fm0_A 62 --RTVRKVAWSPC--GNYLASASFDATTCIWKKNQDDFECVTTLEGH--------ENEVK-------SVAWAPSGNLL-- 120 (345)
T ss_dssp --SCEEEEEECTT--SSEEEEEETTSCEEEEEECCC-EEEEEEECCC--------SSCEE-------EEEECTTSSEE--
T ss_pred --CcEEEEEECCC--CCEEEEEECCCcEEEEEccCCCeEEEEEccCC--------CCCce-------EEEEeCCCCEE--
Confidence 77999999754 889999999999999999877543 333333 22354 78999999988
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCce
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~ 267 (408)
++++.|+.|++|| +..... ..+... +.+|...|.+++|+|++++|+++ .|+.|++||.+....
T Consensus 121 ----------~s~s~D~~v~iwd-~~~~~~---~~~~~~-~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~- 184 (345)
T 3fm0_A 121 ----------ATCSRDKSVWVWE-VDEEDE---YECVSV-LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW- 184 (345)
T ss_dssp ----------EEEETTSCEEEEE-ECTTSC---EEEEEE-ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE-
T ss_pred ----------EEEECCCeEEEEE-CCCCCC---eEEEEE-ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE-
Confidence 9999999999999 543221 122333 37889999999999999999999 999999999984332
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccc-cccceeEE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFT-EIIASISD 346 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~ 346 (408)
... ..+.+|...|++++|+|++ ++|++++.|++|++||........ .+..............+. .|...|.+
T Consensus 185 ~~~-----~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~ 257 (345)
T 3fm0_A 185 VCC-----ATLEGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGNEQ-GVACSGSDPSWKCICTLSGFHSRTIYD 257 (345)
T ss_dssp EEE-----EEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEECTTCTT-CCCCC---CEEEEEEEECSSCSSCEEE
T ss_pred EEE-----EEecCCCCceEEEEECCCC-CEEEEEeCCCeEEEeccccCCCCc-cceeeccCCccceeEEecCCCCCcEEE
Confidence 211 1267899999999999999 999999999999999975432110 000000000000011122 26788999
Q ss_pred EEEccCCCEEEEeC-CCeEEEEECCCCCC---ce-----eeeeecccccceEEecCCC-eeee---eeceeeec
Q 015363 347 IKFARNGRHILSRD-YMTLKLWDINMDSG---PV-----ATFQVHEHLRPKVMHSSKN-YFMG---LDNIHTLY 407 (408)
Q Consensus 347 ~~~spdg~~l~s~~-d~~v~~wd~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~-~~~~---~d~~~~~~ 407 (408)
++|+|++..|++++ |+.|++|+.+.... +. ....+|......+...-++ .+++ .|...+||
T Consensus 258 v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W 331 (345)
T 3fm0_A 258 IAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331 (345)
T ss_dssp EEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred EEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEE
Confidence 99999999999984 79999999875321 11 1234666665555433232 3442 25544444
No 24
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-37 Score=283.06 Aligned_cols=269 Identities=13% Similarity=0.125 Sum_probs=198.8
Q ss_pred eeeccceEEEEECC-CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 32 VQEVDIISAIEFDK-SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 32 ~~h~~~V~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..|...|+||+|+| ++++||+|+.||.|+|||+.++... ....+.+|.
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~---------------------~~~~~~gH~---------- 164 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP---------------------TFIKGIGAG---------- 164 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC---------------------EEECCCSSS----------
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce---------------------eEEEccCCC----------
Confidence 46888999999999 4779999999999999998876531 334567788
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|++|+|+|. ++.+|++++.|++|++||++++........+... ..+. ++.++|++..+
T Consensus 165 --~~V~~l~f~p~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~l---- 224 (435)
T 4e54_B 165 --GSITGLKFNPL-NTNQFYASSMEGTTRLQDFKGNILRVFASSDTIN------IWFC-------SLDVSASSRMV---- 224 (435)
T ss_dssp --CCCCEEEECSS-CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCS------CCCC-------CEEEETTTTEE----
T ss_pred --CCEEEEEEeCC-CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCC------ccEE-------EEEECCCCCEE----
Confidence 77999999863 4679999999999999999887655444433221 1122 68899999988
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCeEEEEeCCCCCcee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
++++.++.|++|| +.. ..... +.+|...|++++|+|++. +|+++ .|+.|++||++......
T Consensus 225 --------~~g~~dg~i~~wd-~~~-------~~~~~-~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~ 287 (435)
T 4e54_B 225 --------VTGDNVGNVILLN-MDG-------KELWN-LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA 287 (435)
T ss_dssp --------EEECSSSBEEEEE-SSS-------CBCCC-SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred --------EEEeCCCcEeeec-cCc-------ceeEE-EecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc
Confidence 9999999999999 432 22333 378999999999999986 67777 89999999998544332
Q ss_pred eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceeccc---------------------------
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTH--------------------------- 321 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------------- 321 (408)
.. ....+|...|++++|+|++ .+|++++.|+.|++||++++......
T Consensus 288 ~~-----~~~~~h~~~v~~~~~spdg-~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (435)
T 4e54_B 288 SF-----LYSLPHRHPVNAACFSPDG-ARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVV 361 (435)
T ss_dssp CC-----SBCCBCSSCEEECCBCTTS-SEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEE
T ss_pred eE-----EEeeeccccccceeECCCC-CeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEE
Confidence 21 1246789999999999999 99999999999999999876432100
Q ss_pred ------------------ccccccccCCCCccccccccceeEEE-EEccCCCEEEEeCCCeEEEEECCCCCCc
Q 015363 322 ------------------SKLFEEQEAPGTRSFFTEIIASISDI-KFARNGRHILSRDYMTLKLWDINMDSGP 375 (408)
Q Consensus 322 ------------------~~~~~~~~~~~~~~~~~~h~~~i~~~-~~spdg~~l~s~~d~~v~~wd~~~~~~~ 375 (408)
++.+..+........+.+|...|.++ +|+|+|++|++|+|+.|+|||++. +++
T Consensus 362 ~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~-gk~ 433 (435)
T 4e54_B 362 GRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQE-ART 433 (435)
T ss_dssp ECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-----
T ss_pred EEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCc-Cee
Confidence 00000000000011134677778877 699999999999999999999986 554
No 25
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.3e-34 Score=254.26 Aligned_cols=284 Identities=12% Similarity=0.181 Sum_probs=217.1
Q ss_pred ceeeccceEEEEECCC-CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 31 EVQEVDIISAIEFDKS-GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
..+|.+.|++|+|+|+ +++||||+.||+|+|||+...+.. .......+.+|.
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~------------------~~~~~~~l~~h~--------- 86 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN------------------YGIPQRALRGHS--------- 86 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC------------------SEEEEEEECCCS---------
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc------------------cceeeEEEeCCC---------
Confidence 4579999999999998 689999999999999999876531 222445678888
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..|.+++|+| ++.+|++++.|+.|++|+................ +. ...+.+++..+
T Consensus 87 ---~~V~~~~~s~--dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~--------~~-------~~~~~~~~~~l--- 143 (340)
T 4aow_A 87 ---HFVSDVVISS--DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD--------VL-------SVAFSSDNRQI--- 143 (340)
T ss_dssp ---SCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--------EE-------EEEECTTSSCE---
T ss_pred ---CCEEEEEECC--CCCEEEEEcccccceEEeecccceeeeecCCCCc--------ee-------EEEEeecCccc---
Confidence 7799999965 4889999999999999999988776655544322 22 46778888877
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC--CEEEEe-cCCeEEEEeCCCCCc
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG--ETFISA-DDLRINLWNLEISNQ 266 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~-~d~~i~iwd~~~~~~ 266 (408)
++++.|+.+++|| +.... .......+|...+..++|++++ .+++++ .|+.|++||++. .+
T Consensus 144 ---------~s~s~d~~~~~~d-~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~-~~ 206 (340)
T 4aow_A 144 ---------VSGSRDKTIKLWN-TLGVC------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-CK 206 (340)
T ss_dssp ---------EEEETTSCEEEEC-TTSCE------EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT-TE
T ss_pred ---------eeecCCCeEEEEE-eCCCc------eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC-Cc
Confidence 9999999999999 43211 1112236788899999998875 567777 899999999994 44
Q ss_pred eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEE
Q 015363 267 SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
.... +.+|...|++++|+|++ ++|++|+.|+.|++||+++.+.+ ..+..+ ..|.+
T Consensus 207 ~~~~-------~~~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~iwd~~~~~~~----~~~~~~-------------~~v~~ 261 (340)
T 4aow_A 207 LKTN-------HIGHTGYLNTVTVSPDG-SLCASGGKDGQAMLWDLNEGKHL----YTLDGG-------------DIINA 261 (340)
T ss_dssp EEEE-------ECCCSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEEE----EEEECS-------------SCEEE
T ss_pred eeeE-------ecCCCCcEEEEEECCCC-CEEEEEeCCCeEEEEEeccCcee----eeecCC-------------ceEEe
Confidence 4333 57799999999999999 99999999999999999988654 455544 57999
Q ss_pred EEEccCCCEEEEeCCCeEEEEECCCCCCceeeee---------ecccccceEEecCCCeee-e--eeceeeec
Q 015363 347 IKFARNGRHILSRDYMTLKLWDINMDSGPVATFQ---------VHEHLRPKVMHSSKNYFM-G--LDNIHTLY 407 (408)
Q Consensus 347 ~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~--~d~~~~~~ 407 (408)
+.|+|++.+++++.|+.|++||++. +..+..+. +|......+....++..+ . .|...+||
T Consensus 262 ~~~~~~~~~~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW 333 (340)
T 4aow_A 262 LCFSPNRYWLCAATGPSIKIWDLEG-KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 333 (340)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTT-TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eecCCCCceeeccCCCEEEEEECCC-CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 9999999988888899999999986 55555544 455555555544444443 2 25555555
No 26
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.2e-35 Score=254.67 Aligned_cols=245 Identities=16% Similarity=0.211 Sum_probs=197.9
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|..+|.+++|+|++++|++|+.|++|++||+.+++ .+..+.+|.
T Consensus 51 ~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~-----------------------~~~~~~~h~---------- 97 (304)
T 2ynn_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE-----------------------KVVDFEAHP---------- 97 (304)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-----------------------EEEEEECCS----------
T ss_pred eeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc-----------------------EEEEEeCCC----------
Confidence 34688999999999999999999999999999998765 346788898
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc-EEEEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCeeec
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK-VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGCGER 188 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~~ 188 (408)
..|.+++|+|+ +.+|++|+.|++|++||++++. ....+..+. ..+. +++|+| ++..+
T Consensus 98 --~~v~~~~~~~~--~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~--------~~v~-------~v~~~p~~~~~l-- 156 (304)
T 2ynn_A 98 --DYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNWALEQTFEGHE--------HFVM-------CVAFNPKDPSTF-- 156 (304)
T ss_dssp --SCEEEEEECSS--SSEEEEEETTSCEEEEEGGGTTEEEEEECCCC--------SCEE-------EEEECTTCTTEE--
T ss_pred --CcEEEEEEcCC--CCEEEEECCCCeEEEEECCCCcchhhhhcccC--------CcEE-------EEEECCCCCCEE--
Confidence 77999999765 7899999999999999998774 444444442 2344 789998 56666
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC--CCCEEEEe-cCCeEEEEeCCCCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS--DGETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.|+.|++|| +... .+...+...|...+..++|+| ++.+|+++ .|++|++||+++ .
T Consensus 157 ----------~sgs~D~~v~iwd-~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-~ 218 (304)
T 2ynn_A 157 ----------ASGCLDRTVKVWS-LGQS------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-K 218 (304)
T ss_dssp ----------EEEETTSEEEEEE-TTCS------SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT-T
T ss_pred ----------EEEeCCCeEEEEE-CCCC------CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC-C
Confidence 9999999999999 5332 222223356667889999986 67899999 999999999994 4
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
.+... +.+|...|.+++|+|++ .+|++|+.||+|++||+++++.. +.+..+ ...+.
T Consensus 219 ~~~~~-------~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~~~----~~~~~~------------~~~~~ 274 (304)
T 2ynn_A 219 SCVAT-------LEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYKVE----KTLNVG------------LERSW 274 (304)
T ss_dssp EEEEE-------EECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEE----EEECCS------------SSSEE
T ss_pred cccee-------eCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcee----eeccCC------------CccEE
Confidence 44433 67899999999999999 89999999999999999988654 555555 36799
Q ss_pred EEEEccCCC--EEEEeCCCeEEEEECCC
Q 015363 346 DIKFARNGR--HILSRDYMTLKLWDINM 371 (408)
Q Consensus 346 ~~~~spdg~--~l~s~~d~~v~~wd~~~ 371 (408)
+++|+|++. +|++|.+..+.+|++..
T Consensus 275 ~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 275 CIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp EEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred EEEECCCCCceEEEEecCCceEEEEecc
Confidence 999999875 68888888899999865
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.4e-35 Score=264.61 Aligned_cols=253 Identities=13% Similarity=0.197 Sum_probs=194.0
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
..|++++|+|+|++||+|+.|+.|+|||+.+++ ....+.+|. ..|
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~-----------------------~~~~~~~h~------------~~v 168 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK-----------------------IVMILQGHE------------QDI 168 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----------------------EEEEECCCS------------SCE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-----------------------EEEEEccCC------------CCE
Confidence 359999999999999999999999999987664 345688898 779
Q ss_pred eEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCeeeccccccc
Q 015363 116 NKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGCGERNFGCAS 194 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 194 (408)
.+++|+|+ +.+|++++.|++|++||+.+++....+.... .+. .++++| +++.+
T Consensus 169 ~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~---------~v~-------~~~~~~~~~~~l-------- 222 (393)
T 1erj_A 169 YSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQCSLTLSIED---------GVT-------TVAVSPGDGKYI-------- 222 (393)
T ss_dssp EEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEECSS---------CEE-------EEEECSTTCCEE--------
T ss_pred EEEEEcCC--CCEEEEecCCCcEEEEECCCCeeEEEEEcCC---------CcE-------EEEEECCCCCEE--------
Confidence 99999755 8899999999999999999998776655422 233 678888 78887
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeec
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDV 273 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~ 273 (408)
++++.|+.|++|| +.................+|...|.+++|+|++++|+++ .|+.|++||++...........
T Consensus 223 ----~~~s~d~~v~iwd-~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 223 ----AAGSLDRAVRVWD-SETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp ----EEEETTSCEEEEE-TTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred ----EEEcCCCcEEEEE-CCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 9999999999999 543221111100001125788999999999999999999 8999999999853221100000
Q ss_pred ----CCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 274 ----KPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 274 ----~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
....+.+|...|.+++|+|++ .+|++|+.|+.|++||+++++.+ ..+.+| ...|.+++|
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~----~~l~~h------------~~~v~~v~~ 360 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKSGNPL----LMLQGH------------RNSVISVAV 360 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTTCCEE----EEEECC------------SSCEEEEEE
T ss_pred CCCcceEEEecccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCCCeEE----EEECCC------------CCCEEEEEe
Confidence 001256799999999999999 99999999999999999988654 555666 578999998
Q ss_pred cc------CCCEEEEeC-CCeEEEEECCC
Q 015363 350 AR------NGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 350 sp------dg~~l~s~~-d~~v~~wd~~~ 371 (408)
++ ++.+|++|+ |++|++|++..
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 86 688999985 79999999864
No 28
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.8e-35 Score=257.68 Aligned_cols=248 Identities=17% Similarity=0.269 Sum_probs=197.9
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|...|.+++|+|+|.+||+|+.|+.+++|++...... ........+.+|.
T Consensus 103 ~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~-----------------~~~~~~~~~~~h~----------- 154 (354)
T 2pbi_B 103 TMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE-----------------NMAAKKKSVAMHT----------- 154 (354)
T ss_dssp ECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC-----------------CSGGGCEEEEECS-----------
T ss_pred ecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc-----------------cccccceeeeccC-----------
Confidence 357788999999999999999999999999998654321 0112234566787
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc--CCCeeecc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA--NGGCGERN 189 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~l~~~ 189 (408)
..|.+++|+|+ +..|++++.|++|++||+++++....+..+.. .+. ++.++| ++..+
T Consensus 155 -~~v~~~~~~~~--~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~--------~v~-------~~~~~~~~~g~~l--- 213 (354)
T 2pbi_B 155 -NYLSACSFTNS--DMQILTASGDGTCALWDVESGQLLQSFHGHGA--------DVL-------CLDLAPSETGNTF--- 213 (354)
T ss_dssp -SCEEEEEECSS--SSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEE-------EEEECCCSSCCEE---
T ss_pred -CcEEEEEEeCC--CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC--------CeE-------EEEEEeCCCCCEE---
Confidence 77999999755 77999999999999999999998877766533 233 466666 56676
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
++++.|+.|++|| +.. ..+...+ ..|...|++++|+|++.+|+++ .|++|++||++.. ...
T Consensus 214 ---------~sgs~Dg~v~~wd-~~~------~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~ 275 (354)
T 2pbi_B 214 ---------VSGGCDKKAMVWD-MRS------GQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-REV 275 (354)
T ss_dssp ---------EEEETTSCEEEEE-TTT------CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEE
T ss_pred ---------EEEeCCCeEEEEE-CCC------CcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEE
Confidence 9999999999999 433 3344444 7899999999999999999999 9999999999843 333
Q ss_pred eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEE
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIK 348 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 348 (408)
..+. ...+...+.+++|+|++ .+|++|+.|+.|++||+.++..+ ..+.+| ...|.+++
T Consensus 276 ~~~~-----~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~~~----~~l~~h------------~~~v~~l~ 333 (354)
T 2pbi_B 276 AIYS-----KESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKGSRV----SILFGH------------ENRVSTLR 333 (354)
T ss_dssp EEEC-----CTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEE----EEECCC------------SSCEEEEE
T ss_pred EEEc-----CCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCCceE----EEEECC------------CCcEEEEE
Confidence 3321 22334568999999999 99999999999999999888654 455555 57899999
Q ss_pred EccCCCEEEEeC-CCeEEEEE
Q 015363 349 FARNGRHILSRD-YMTLKLWD 368 (408)
Q Consensus 349 ~spdg~~l~s~~-d~~v~~wd 368 (408)
|+|||++|++|+ |++|++|+
T Consensus 334 ~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 334 VSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCCEEEEEcCCCCEEecC
Confidence 999999999996 79999996
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-35 Score=265.32 Aligned_cols=269 Identities=16% Similarity=0.253 Sum_probs=203.5
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|...|.+++|+|+|++||+|+.|+.|+||++.+.... .........+.+|.
T Consensus 104 ~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~----------------~~~~~~~~~~~gh~---------- 157 (380)
T 3iz6_a 104 IKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR----------------DGNMPVSRVLTGHK---------- 157 (380)
T ss_dssp EECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC----------------CCSSTTCCBCCCCS----------
T ss_pred EecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc----------------cCCccceeeccCCC----------
Confidence 3468899999999999999999999999999998764321 01222344577888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCeeecc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGCGERN 189 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~~~ 189 (408)
..|.++.|+|.. +..|++|+.|++|++||+.+++....+...... .....+. .+.+++ ++..+
T Consensus 158 --~~v~~~~~~~~~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~---~h~~~v~-------~~~~~~~~~~~l--- 221 (380)
T 3iz6_a 158 --GYASSCQYVPDQ-ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPS---GHTADVL-------SLSINSLNANMF--- 221 (380)
T ss_dssp --SCCCCCBCCSSS-SSCEEEECTTSCEEEECTTTCCEEEEECCCSSS---SCCSCEE-------EEEECSSSCCEE---
T ss_pred --cceEEEEEecCC-CCEEEEECCCCcEEEEEcCCCcEEEEeecccCC---CCccCeE-------EEEeecCCCCEE---
Confidence 779999998753 357999999999999999999887766332111 0122343 567765 66766
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
++++.|+.|++|| +... ..+...+ .+|...|++++|+|++++|+++ .|++|++||+++ +...
T Consensus 222 ---------~sgs~D~~v~~wd-~~~~-----~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~ 284 (380)
T 3iz6_a 222 ---------ISGSCDTTVRLWD-LRIT-----SRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQL 284 (380)
T ss_dssp ---------EEEETTSCEEEEE-TTTT-----CCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEE
T ss_pred ---------EEEECCCeEEEEE-CCCC-----CcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEE
Confidence 9999999999999 5321 2233443 7899999999999999999999 999999999994 4444
Q ss_pred eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEE
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIK 348 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 348 (408)
..+...+.....+...|++++|+|++ .+|++|+.||.|++||+..++.. ..+... ..+|...|.+++
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~~----~~~~~~--------~~~h~~~v~~l~ 351 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEMV----LNLGTL--------QNSHEGRISCLG 351 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCEE----EEECCS--------CSSCCCCCCEEE
T ss_pred EEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCCceE----EEEecc--------cCCCCCceEEEE
Confidence 44332222223344568999999999 99999999999999999887654 222111 134568899999
Q ss_pred EccCCCEEEEeC-CCeEEEEECCC
Q 015363 349 FARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 349 ~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
|+|||++|++|+ |++|++|++..
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCS
T ss_pred ECCCCCEEEEeeCCCCEEEEecCC
Confidence 999999999996 79999999975
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-34 Score=254.02 Aligned_cols=271 Identities=14% Similarity=0.164 Sum_probs=196.1
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeee-cc-CCcccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEF-QS-HEPEFDYLKS 108 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~-h~~~~~~~~~ 108 (408)
..+|.++|++++|+|+ +||+|+.|++|+||++..+.. .....+ .+ |.
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~---------------------~~~~~~~~~~h~-------- 58 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF---------------------TLIDVLDETAHK-------- 58 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC---------------------EEEEEECTTCCC--------
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe---------------------EEEEEEecCCcc--------
Confidence 3579999999999988 999999999999999876431 122334 33 76
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC-------cEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEK-------KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA 181 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 181 (408)
..|.+++|+|+ +.+|++++.|++|++||+... +....+..+ .+.|. +++|+|
T Consensus 59 ----~~v~~v~~sp~--~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h--------~~~V~-------~v~~sp 117 (330)
T 2hes_X 59 ----KAIRSVAWRPH--TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH--------ENEVK-------GVAWSN 117 (330)
T ss_dssp ----SCEEEEEECTT--SSEEEEEETTSCEEEEEC-------CCCEEEEEEC------------CEE-------EEEECT
T ss_pred ----CCEEEEEECCC--CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC--------CCcEE-------EEEECC
Confidence 77999999765 889999999999999998642 233333333 22344 789999
Q ss_pred CCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEe
Q 015363 182 NGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWN 260 (408)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd 260 (408)
+++.+ ++++.|+.|++|| +.... ....+...+ .+|...|++++|+|++.+|+++ .|++|++||
T Consensus 118 ~g~~l------------as~s~D~~v~iwd-~~~~~--~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~ 181 (330)
T 2hes_X 118 DGYYL------------ATCSRDKSVWIWE-TDESG--EEYECISVL-QEHSQDVKHVIWHPSEALLASSSYDDTVRIWK 181 (330)
T ss_dssp TSCEE------------EEEETTSCEEEEE-CCTTC--CCCEEEEEE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred CCCEE------------EEEeCCCEEEEEe-ccCCC--CCeEEEEEe-ccCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 99988 9999999999999 53211 112233443 7899999999999999999999 899999999
Q ss_pred CCCCC-ceeeEeecCCCcccCCcCCeEEEEEcCC--CCceEEEEeCCCeEEEEEcCCCceec----ccccccccccCCCC
Q 015363 261 LEISN-QSFNIVDVKPANMEDLTEVITSAEFHPT--HCNMLAYSSSKGSIRLIDMRQSALCD----THSKLFEEQEAPGT 333 (408)
Q Consensus 261 ~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~~ 333 (408)
..... .+... +.+|...|.+++|+|+ + .+|++|+.|++|++||++.+.... .....+.
T Consensus 182 ~~~~~~~~~~~-------~~~h~~~v~~~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~------- 246 (330)
T 2hes_X 182 DYDDDWECVAV-------LNGHEGTVWSSDFDKTEGV-FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILP------- 246 (330)
T ss_dssp EETTEEEEEEE-------ECCCSSCEEEEEECCSSSS-CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECC-------
T ss_pred CCCCCeeEEEE-------ccCCCCcEEEEEecCCCCe-eEEEEEeCCCeEEEEEecCCCccccceeEEeeecc-------
Confidence 87432 23332 6789999999999999 5 789999999999999997642100 0001111
Q ss_pred ccccccccceeEEEEEccCCCEEEEe-CCCeEEEEECCCCCC--cee-eeeeccc-ccceEE
Q 015363 334 RSFFTEIIASISDIKFARNGRHILSR-DYMTLKLWDINMDSG--PVA-TFQVHEH-LRPKVM 390 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg~~l~s~-~d~~v~~wd~~~~~~--~~~-~~~~~~~-~~~~~~ 390 (408)
..|...|.+++|++++ +|+++ .|+.|++||..+ ++ .+. .+.+|.. ....+.
T Consensus 247 ----~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~h~~~~v~~v~ 302 (330)
T 2hes_X 247 ----DVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD-GEWKVFAKRALCHGVYEINVVK 302 (330)
T ss_dssp ----SCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET-TEEEEEEEESCTTTTSCEEEEE
T ss_pred ----cccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC-CceEEEeccccccccceEEEEE
Confidence 1256789999999776 56666 589999999976 42 232 2356664 344443
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-34 Score=253.59 Aligned_cols=272 Identities=14% Similarity=0.228 Sum_probs=197.4
Q ss_pred cccceeeecccC--cCcccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccc
Q 015363 14 PLEWKFSQVFGE--RTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFR 91 (408)
Q Consensus 14 ~~~w~~~~~~~~--~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 91 (408)
-..|++...-.. .......+|...|++++|+|++++|++|+.|++|+|||+.+++
T Consensus 42 v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~----------------------- 98 (319)
T 3frx_A 42 LISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE----------------------- 98 (319)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----------------------
T ss_pred EEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC-----------------------
Confidence 456877642100 0112345799999999999999999999999999999998765
Q ss_pred eeeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeec
Q 015363 92 YKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSH 171 (408)
Q Consensus 92 ~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (408)
.+..+.+|. ..|.+++|+|+ +.+|++++.|++|++||++... ...+..+. ..+.
T Consensus 99 ~~~~~~~h~------------~~v~~~~~~~~--~~~l~s~s~D~~i~vwd~~~~~-~~~~~~h~--------~~v~--- 152 (319)
T 3frx_A 99 TYQRFVGHK------------SDVMSVDIDKK--ASMIISGSRDKTIKVWTIKGQC-LATLLGHN--------DWVS--- 152 (319)
T ss_dssp EEEEEECCS------------SCEEEEEECTT--SCEEEEEETTSCEEEEETTSCE-EEEECCCS--------SCEE---
T ss_pred eeEEEccCC------------CcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCe-EEEEeccC--------CcEE---
Confidence 346788898 77999999654 7899999999999999997543 44433332 2233
Q ss_pred CCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe
Q 015363 172 VSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA 251 (408)
Q Consensus 172 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 251 (408)
.+.+.|.... ......+++++.|+.|++|| +.. ...... +.+|...|++++|+|++++|+++
T Consensus 153 ----~~~~~~~~~~------~~~~~~l~s~~~d~~i~~wd-~~~------~~~~~~-~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 153 ----QVRVVPNEKA------DDDSVTIISAGNDKMVKAWN-LNQ------FQIEAD-FIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ----EEEECCC------------CCEEEEEETTSCEEEEE-TTT------TEEEEE-ECCCCSCEEEEEECTTSSEEEEE
T ss_pred ----EEEEccCCCC------CCCccEEEEEeCCCEEEEEE-CCc------chhhee-ecCCCCcEEEEEEcCCCCEEEEE
Confidence 5677775431 00111239999999999999 433 222333 37899999999999999999999
Q ss_pred -cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccC
Q 015363 252 -DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA 330 (408)
Q Consensus 252 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 330 (408)
.|+.|++||+.. .+.... +. +...|.+++|+|++ .+|++++. ..+++|++...... ..+..+.
T Consensus 215 ~~dg~i~iwd~~~-~~~~~~-------~~-~~~~v~~~~~sp~~-~~la~~~~-~~i~v~~~~~~~~~----~~~~~~~- 278 (319)
T 3frx_A 215 GKDGEIMLWNLAA-KKAMYT-------LS-AQDEVFSLAFSPNR-YWLAAATA-TGIKVFSLDPQYLV----DDLRPEF- 278 (319)
T ss_dssp ETTCEEEEEETTT-TEEEEE-------EE-CCSCEEEEEECSSS-SEEEEEET-TEEEEEEETTEEEE----EEECCCC-
T ss_pred eCCCeEEEEECCC-CcEEEE-------ec-CCCcEEEEEEcCCC-CEEEEEcC-CCcEEEEeCcCeee----eccCccc-
Confidence 999999999994 444433 22 34679999999999 88888764 56999999876443 2222111
Q ss_pred CCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 331 PGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
......|...+.+++|+|||++|++|+ |+.|++||+.+
T Consensus 279 ---~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 279 ---AGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp ---TTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ---cccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 111233456799999999999999985 79999999975
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2e-34 Score=278.55 Aligned_cols=261 Identities=14% Similarity=0.225 Sum_probs=209.6
Q ss_pred ceeeccceEEEEECCC-CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 31 EVQEVDIISAIEFDKS-GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
..+|.+.|++|+|+|+ +++|+||+.|++|+||++...... .......+.+|.
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~------------------~~~~~~~~~~h~--------- 430 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA------------------YGVAQRRLTGHS--------- 430 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC------------------SCEEEEEEECCS---------
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc------------------cccccceecCCC---------
Confidence 4579999999999987 579999999999999998765321 112345678888
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..|.+++|+|+ +.+|++|+.|++|++||+.+++....+..|.. .|. +++|+|+++.+
T Consensus 431 ---~~v~~v~~s~~--g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~--------~v~-------~~~~s~~~~~l--- 487 (694)
T 3dm0_A 431 ---HFVEDVVLSSD--GQFALSGSWDGELRLWDLAAGVSTRRFVGHTK--------DVL-------SVAFSLDNRQI--- 487 (694)
T ss_dssp ---SCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEECCSS--------CEE-------EEEECTTSSCE---
T ss_pred ---CcEEEEEECCC--CCEEEEEeCCCcEEEEECCCCcceeEEeCCCC--------CEE-------EEEEeCCCCEE---
Confidence 77999999754 88999999999999999999988777666532 354 78999999988
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC--CEEEEe-cCCeEEEEeCCCCCc
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG--ETFISA-DDLRINLWNLEISNQ 266 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~-~d~~i~iwd~~~~~~ 266 (408)
++++.|+.|++|| ....... . ......+|...|.+++|+|++ ..|+++ .|++|++||++.. +
T Consensus 488 ---------~s~s~D~~i~iwd-~~~~~~~---~-~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~-~ 552 (694)
T 3dm0_A 488 ---------VSASRDRTIKLWN-TLGECKY---T-ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC-K 552 (694)
T ss_dssp ---------EEEETTSCEEEEC-TTSCEEE---E-ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC-C
T ss_pred ---------EEEeCCCEEEEEE-CCCCcce---e-eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC-c
Confidence 9999999999999 4221110 0 001125788899999999987 578888 8999999999843 3
Q ss_pred eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEE
Q 015363 267 SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
.... +.+|...|++++|+|++ ++|++|+.|+.|++||+++++.+ ..+..+ ..|.+
T Consensus 553 ~~~~-------~~~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~~~~----~~~~~~-------------~~v~~ 607 (694)
T 3dm0_A 553 LRST-------LAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGKKL----YSLEAN-------------SVIHA 607 (694)
T ss_dssp EEEE-------ECCCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTTTEEE----ECCBCS-------------SCEEE
T ss_pred EEEE-------EcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCceE----EEecCC-------------CcEEE
Confidence 4332 67899999999999999 99999999999999999998654 444433 57999
Q ss_pred EEEccCCCEEEEeCCCeEEEEECCCCCCceeeeeec
Q 015363 347 IKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 347 ~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
++|+|++.+|++++++.|++||+++ +..+..+..+
T Consensus 608 ~~~sp~~~~l~~~~~~~i~iwd~~~-~~~~~~~~~~ 642 (694)
T 3dm0_A 608 LCFSPNRYWLCAATEHGIKIWDLES-KSIVEDLKVD 642 (694)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTT-TEEEEEECCC
T ss_pred EEEcCCCcEEEEEcCCCEEEEECCC-CCChhhhccc
Confidence 9999999999999888899999997 6777766543
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-35 Score=255.89 Aligned_cols=257 Identities=12% Similarity=0.200 Sum_probs=184.0
Q ss_pred eeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
.|.+.|++++|+|++++||+|+.|++|+||+....... ....+....+.+|.
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~----------------~~~~~~~~~~~~h~------------ 107 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR----------------TFEMDLLAIIEGHE------------ 107 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-----------------------CCCEEEEEEC---------------
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc----------------cccceeEEEEcCCC------------
Confidence 39999999999999999999999999999998643210 01223456678888
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC----cEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEK----KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..|.+++|+|+ +.+|++++.|++|++||+... ++...+..+. ..+. ++.|+|++..+
T Consensus 108 ~~V~~v~~sp~--g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~--------~~v~-------~v~~~p~~~~l-- 168 (330)
T 2hes_X 108 NEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHS--------QDVK-------HVIWHPSEALL-- 168 (330)
T ss_dssp -CEEEEEECTT--SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS--------SCEE-------EEEECSSSSEE--
T ss_pred CcEEEEEECCC--CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC--------CceE-------EEEECCCCCEE--
Confidence 77999999755 889999999999999999532 3344444332 2344 78999999988
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC--CCEEEEe-cCCeEEEEeCCCCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD--GETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.|+.|++|+ ..... ..+...+ .+|...|.+++|+|+ +..|+++ .|++|++||++...
T Consensus 169 ----------~s~s~D~~i~iW~-~~~~~----~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~ 232 (330)
T 2hes_X 169 ----------ASSSYDDTVRIWK-DYDDD----WECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDD 232 (330)
T ss_dssp ----------EEEETTSCEEEEE-EETTE----EEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEEC
T ss_pred ----------EEEcCCCeEEEEE-CCCCC----eeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCC
Confidence 9999999999999 43321 1334444 789999999999999 6789998 99999999997432
Q ss_pred c----eeeEeecCCCcccC-CcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccc
Q 015363 266 Q----SFNIVDVKPANMED-LTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEI 340 (408)
Q Consensus 266 ~----~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 340 (408)
. ..... ..+.. |...|++++|++++ +|++++.|+.|++||..++... .....+.+|
T Consensus 233 ~~~~~~~~~~----~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~h------------ 293 (330)
T 2hes_X 233 EDDQQEWVCE----AILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEWK-VFAKRALCH------------ 293 (330)
T ss_dssp TTSCEEEEEE----EECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEEE-EEEEESCTT------------
T ss_pred ccccceeEEe----eecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCceE-EEecccccc------------
Confidence 1 00110 11333 88999999999765 7999999999999999876311 000112233
Q ss_pred cc-eeEEEEEcc--CCCEEEEeC-CCeEEEEECCC
Q 015363 341 IA-SISDIKFAR--NGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 341 ~~-~i~~~~~sp--dg~~l~s~~-d~~v~~wd~~~ 371 (408)
.. .|.+++|+| ++++|++|+ |++|++||++.
T Consensus 294 ~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 294 GVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 44 799999999 789999985 79999999864
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-34 Score=275.40 Aligned_cols=255 Identities=15% Similarity=0.184 Sum_probs=198.6
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..+.+.+.+++|+|+|++||+++ ++.|+||++.++.. ...+.+|.
T Consensus 15 ~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~-----------------------~~~~~~h~----------- 59 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTD-----------------------TEIYTEHS----------- 59 (611)
T ss_dssp CCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSC-----------------------CEEECCCS-----------
T ss_pred CcccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCccc-----------------------CeEecCCC-----------
Confidence 35678899999999999999997 56999999876542 35688998
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE--EEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV--KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..|++++|+|+ |++||+|+.|++|+|||+.+++. ...+..+ .+.|. .++|+|+++.+
T Consensus 60 -~~v~~~~~spd--g~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~--------~~~v~-------~v~fs~dg~~l--- 118 (611)
T 1nr0_A 60 -HQTTVAKTSPS--GYYCASGDVHGNVRIWDTTQTTHILKTTIPVF--------SGPVK-------DISWDSESKRI--- 118 (611)
T ss_dssp -SCEEEEEECTT--SSEEEEEETTSEEEEEESSSTTCCEEEEEECS--------SSCEE-------EEEECTTSCEE---
T ss_pred -CceEEEEECCC--CcEEEEEeCCCCEEEeECCCCcceeeEeeccc--------CCceE-------EEEECCCCCEE---
Confidence 77999999755 89999999999999999975543 3333333 23455 79999999987
Q ss_pred cccccCccccCCCCC----ceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCeEEEEeCCC
Q 015363 190 FGCASNDSSFPPGGV----SSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLRINLWNLEI 263 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~iwd~~~ 263 (408)
++++.+ +.|++|| .. .+... +.+|...|++++|+|++. .|+++ .|++|++||...
T Consensus 119 ---------~~~~~~~~~~~~v~~wd-~~--------~~~~~-l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~ 179 (611)
T 1nr0_A 119 ---------AAVGEGRERFGHVFLFD-TG--------TSNGN-LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP 179 (611)
T ss_dssp ---------EEEECCSSCSEEEEETT-TC--------CBCBC-CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT
T ss_pred ---------EEEECCCCceeEEEEee-CC--------CCcce-ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC
Confidence 655543 5889888 21 12233 378999999999999987 58888 999999999873
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccce
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIAS 343 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 343 (408)
.+.... +.+|...|++++|+|++ ++|++++.|++|++||+.+++.. ..+... .....+|...
T Consensus 180 -~~~~~~-------l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~----~~~~~~-----~~~~~~h~~~ 241 (611)
T 1nr0_A 180 -FKFKST-------FGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKT----GVFEDD-----SLKNVAHSGS 241 (611)
T ss_dssp -BEEEEE-------ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEE----EECBCT-----TSSSCSSSSC
T ss_pred -CeEeee-------eccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEe----eeeccc-----cccccccCCC
Confidence 344333 67899999999999999 99999999999999999988653 333210 0011256789
Q ss_pred eEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 344 ISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 344 i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
|.+++|+|||++|++++ |++|++||+++ +++++++.
T Consensus 242 V~~v~~spdg~~l~s~s~D~~v~lWd~~~-~~~~~~~~ 278 (611)
T 1nr0_A 242 VFGLTWSPDGTKIASASADKTIKIWNVAT-LKVEKTIP 278 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEeCCC-Cceeeeec
Confidence 99999999999999985 79999999987 56655543
No 35
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=252.50 Aligned_cols=276 Identities=13% Similarity=0.141 Sum_probs=221.7
Q ss_pred cceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 30 EEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
...+|.+.|++++|+|++++|++|+.||.|+|||+.+++ .+..+.+|.
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-----------------------~~~~~~~h~--------- 74 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE-----------------------RLGTLDGHT--------- 74 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC-----------------------EEEEECCCS---------
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch-----------------------hhhhhhhcC---------
Confidence 346799999999999999999999999999999987665 346678888
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..|.+++|+| ++.+|++++.|+.|++||+.+++....+... ..+. .+.|+|+++.+
T Consensus 75 ---~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------~~v~-------~~~~~~~~~~l--- 130 (369)
T 3zwl_B 75 ---GTIWSIDVDC--FTKYCVTGSADYSIKLWDVSNGQCVATWKSP---------VPVK-------RVEFSPCGNYF--- 130 (369)
T ss_dssp ---SCEEEEEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEECS---------SCEE-------EEEECTTSSEE---
T ss_pred ---CcEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcEEEEeecC---------CCeE-------EEEEccCCCEE---
Confidence 7799999975 4889999999999999999999887776632 2344 78999999987
Q ss_pred cccccCccccCCCCC-----ceeeeceeeecccccc-----ccccceeecccccc--ceEEEEeCCCCCEEEEe-cCCeE
Q 015363 190 FGCASNDSSFPPGGV-----SSLRLPVVVTSQETNL-----VAGCRRIYAHAHDY--HINSISNNSDGETFISA-DDLRI 256 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~v~~i~~~~~~~~l~~~-~d~~i 256 (408)
++++.+ +.|.+|+ +....... .......+ ..|.. .+.+++|+|++++|+++ .|+.|
T Consensus 131 ---------~~~~~~~~~~~g~i~~~d-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 199 (369)
T 3zwl_B 131 ---------LAILDNVMKNPGSINIYE-IERDSATHELTKVSEEPIHKI-ITHEGLDAATVAGWSTKGKYIIAGHKDGKI 199 (369)
T ss_dssp ---------EEEECCBTTBCCEEEEEE-EEECTTTCCEEEECSSCSEEE-ECCTTCCCEEEEEECGGGCEEEEEETTSEE
T ss_pred ---------EEecCCccCCCCEEEEEE-ecCCccceeecccccceeeec-cCCcCccceeEEEEcCCCCEEEEEcCCCEE
Confidence 777777 9999999 54432211 11122222 44544 89999999999999999 99999
Q ss_pred EEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccc
Q 015363 257 NLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSF 336 (408)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (408)
++||++........ +..|...|.+++|+|++ .+|++++.|+.|++||+++++.. ..+..
T Consensus 200 ~i~d~~~~~~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~----~~~~~--------- 258 (369)
T 3zwl_B 200 SKYDVSNNYEYVDS-------IDLHEKSISDMQFSPDL-TYFITSSRDTNSFLVDVSTLQVL----KKYET--------- 258 (369)
T ss_dssp EEEETTTTTEEEEE-------EECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE----EEEEC---------
T ss_pred EEEECCCCcEeEEE-------EecCCCceeEEEECCCC-CEEEEecCCceEEEEECCCCcee----eeecC---------
Confidence 99999964555543 56688999999999999 99999999999999999988654 44442
Q ss_pred cccccceeEEEEEccCCCEEEEeC-CC--------------eEEEEECCCCCCceeeeeecccccceEEecCCCeee
Q 015363 337 FTEIIASISDIKFARNGRHILSRD-YM--------------TLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFM 398 (408)
Q Consensus 337 ~~~h~~~i~~~~~spdg~~l~s~~-d~--------------~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (408)
...+..++|+|++++|++++ ++ .+++||+.+ ++++..+.+|......+....++..+
T Consensus 259 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l 330 (369)
T 3zwl_B 259 ----DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHFGPLNTVAISPQGTSY 330 (369)
T ss_dssp ----SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ----CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC-CcchhheecccCcEEEEEECCCCCEE
Confidence 26799999999999999984 55 899999998 79999999998887766654455543
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=258.94 Aligned_cols=261 Identities=15% Similarity=0.259 Sum_probs=203.3
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|++++||+|+.||.|+||++.... .+....+.+|.
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~---------------------~~~~~~~~~h~---------- 55 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---------------------HKLIDTLTGHE---------- 55 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE---------------------EEEEEEECCCS----------
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc---------------------ceeeeEecCCC----------
Confidence 45799999999999999999999999999999987432 22456788888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccC--CCeeec
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN--GGCGER 188 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~l~~ 188 (408)
..|++++|+|+.++.+|++++.|+.|++||+.+++.........+ ...+. +++|+|+ +..+
T Consensus 56 --~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------~~~v~-------~~~~~~~~~~~~l-- 118 (379)
T 3jrp_A 56 --GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH------SASVN-------SVQWAPHEYGPLL-- 118 (379)
T ss_dssp --SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC------SSCEE-------EEEECCGGGCSEE--
T ss_pred --CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC------CcceE-------EEEeCCCCCCCEE--
Confidence 779999998665578999999999999999999874333333221 22344 7899999 8887
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-------------CCCEEEEe-cCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-------------DGETFISA-DDL 254 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-------------~~~~l~~~-~d~ 254 (408)
++++.++.|++|| +...... .... ...|...|.+++|+| ++.+|+++ .|+
T Consensus 119 ----------~~~~~d~~i~v~d-~~~~~~~----~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 119 ----------LVASSDGKVSVVE-FKENGTT----SPII-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 182 (379)
T ss_dssp ----------EEEETTSEEEEEE-CCTTSCC----CEEE-EECCTTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred ----------EEecCCCcEEEEe-cCCCCce----eeEE-ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence 9999999999999 5443211 1112 367889999999999 68999999 899
Q ss_pred eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCC---CCceEEEEeCCCeEEEEEcCCCceecccccccccccCC
Q 015363 255 RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPT---HCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAP 331 (408)
Q Consensus 255 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 331 (408)
.|++||++......... ..+.+|...|.+++|+|+ + .+|++++.||.|++||++++..... ...+.
T Consensus 183 ~i~i~d~~~~~~~~~~~----~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~----- 251 (379)
T 3jrp_A 183 LVKIWKYNSDAQTYVLE----STLEGHSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQGPWK-KTLLK----- 251 (379)
T ss_dssp CEEEEEEETTTTEEEEE----EEECCCSSCEEEEEECCCCSSS-EEEEEEETTSCEEEEEESSTTSCCE-EEESS-----
T ss_pred eEEEEEecCCCcceeeE----EEEecccCcEeEEEECCCCCCC-CeEEEEeCCCEEEEEeCCCCCccce-eeeec-----
Confidence 99999998655433222 126789999999999999 7 9999999999999999998642100 01111
Q ss_pred CCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 332 GTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 332 ~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
...|...|.+++|+|+|++|++++ |+.|++|+++.
T Consensus 252 -----~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 252 -----EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp -----SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred -----cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 122457899999999999999884 79999999985
No 37
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.5e-34 Score=254.26 Aligned_cols=267 Identities=10% Similarity=0.146 Sum_probs=193.8
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|...|++++|+|++.+|++|+.|++|+|||+.+++ .+..+.+|.
T Consensus 72 l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~-----------------------~~~~~~~h~---------- 118 (343)
T 2xzm_R 72 LTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT-----------------------TYKRFVGHQ---------- 118 (343)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC-----------------------EEEEEECCC----------
T ss_pred hccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----------------------EEEEEcCCC----------
Confidence 45799999999999999999999999999999988765 346788888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.+++|+|+ +.+|++++.|++|++||+.............+ ...+. ++.|+|++.....
T Consensus 119 --~~v~~v~~sp~--~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~------~~~v~-------~~~~~~~~~~~~~-- 179 (343)
T 2xzm_R 119 --SEVYSVAFSPD--NRQILSAGAEREIKLWNILGECKFSSAEKENH------SDWVS-------CVRYSPIMKSANK-- 179 (343)
T ss_dssp --SCEEEEEECSS--TTEEEEEETTSCEEEEESSSCEEEECCTTTSC------SSCEE-------EEEECCCCCSCSC--
T ss_pred --CcEEEEEECCC--CCEEEEEcCCCEEEEEeccCCceeeeecccCC------Cceee-------eeeeccccccccc--
Confidence 77999999765 88999999999999999985433222211111 22343 6788888742211
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
......++++++.|+.|++|| .. ...... +.+|...|++++|+|++++|++| .|+.|++||+........
T Consensus 180 ~~~~~~~l~s~~~d~~i~iwd-~~-------~~~~~~-~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 180 VQPFAPYFASVGWDGRLKVWN-TN-------FQIRYT-FKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCSSCCEEEEEETTSEEEEEE-TT-------TEEEEE-EECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred cCCCCCEEEEEcCCCEEEEEc-CC-------CceeEE-EcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 111123458999999999999 32 222333 37899999999999999999999 999999999964444333
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
. + .+...|.+++|+|++ .+++++ .|+.|++||+.+++... +..+..+.. .......+|...|.+++|
T Consensus 251 ~-------~-~~~~~v~~v~~sp~~-~~la~~-~d~~v~iw~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~v~~~~~ 317 (343)
T 2xzm_R 251 E-------F-DAGSTINQIAFNPKL-QWVAVG-TDQGVKIFNLMTQSKAP--VCTIEAEPI-TKAEGQKGKNPQCTSLAW 317 (343)
T ss_dssp E-------E-ECSSCEEEEEECSSS-CEEEEE-ESSCEEEEESSSCCSCS--EEECCCCSG-GGBTTBCCSCCCEEEEEE
T ss_pred e-------e-cCCCcEEEEEECCCC-CEEEEE-CCCCEEEEEeCCCCCCc--eEEeecCcc-hhhhhhcCCCCceEEEEE
Confidence 2 1 234569999999999 777654 58889999998765321 012221100 001112356788999999
Q ss_pred ccCCCEEEEeC-CCeEEEEECCC
Q 015363 350 ARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 350 spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
+|+|++|++|+ |+.|++|++.+
T Consensus 318 sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 318 NALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CSSSCCEEEEETTSEEEEEEEEE
T ss_pred CCCCCeEEEecCCceEEEEEEEc
Confidence 99999999985 79999999865
No 38
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.8e-34 Score=254.84 Aligned_cols=251 Identities=11% Similarity=0.139 Sum_probs=203.6
Q ss_pred eeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
.|.++|++++|+|++++||+|+.||.|+||++.+++ ++....+.+|.
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~---------------------~~~~~~~~~h~------------ 52 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK---------------------WVQVHELKEHN------------ 52 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE---------------------EEEEEEEECCS------------
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc---------------------EEeeeeecCCC------------
Confidence 478999999999999999999999999999988663 11356677888
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..|.+++|+|+ +.+|++++.|+.|++||+.+++.........+ ...+. ++.|+|+++.+
T Consensus 53 ~~v~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~------~~~v~-------~~~~~~~~~~l------ 111 (372)
T 1k8k_C 53 GQVTGVDWAPD--SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI------NRAAR-------CVRWAPNEKKF------ 111 (372)
T ss_dssp SCEEEEEEETT--TTEEEEEETTSCEEEEEEETTEEEEEEECCCC------SSCEE-------EEEECTTSSEE------
T ss_pred CcccEEEEeCC--CCEEEEEcCCCeEEEEECCCCeeeeeEEeecC------CCcee-------EEEECCCCCEE------
Confidence 77999999764 78999999999999999998876655443222 22344 78999999987
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCC--------
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEI-------- 263 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~-------- 263 (408)
++++.++.|++|+ +..... ......+...|...|.+++|+|++++|+++ .|+.|++||++.
T Consensus 112 ------~~~~~d~~v~i~d-~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 181 (372)
T 1k8k_C 112 ------AVGSGSRVISICY-FEQEND---WWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 181 (372)
T ss_dssp ------EEEETTSSEEEEE-EETTTT---EEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC
T ss_pred ------EEEeCCCEEEEEE-ecCCCc---ceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc
Confidence 9999999999999 544321 111222236788899999999999999999 899999999742
Q ss_pred ---------CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCc
Q 015363 264 ---------SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTR 334 (408)
Q Consensus 264 ---------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 334 (408)
....... +..|...|.+++|+|++ .+|++++.|+.|++||+++++.+ ..+..|
T Consensus 182 ~~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~------ 243 (372)
T 1k8k_C 182 PTPWGSKMPFGELMFE-------SSSSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADKKMAV----ATLASE------ 243 (372)
T ss_dssp CBTTBSCCCTTCEEEE-------CCCCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGGGTTEE----EEEECS------
T ss_pred ccccccccchhhheEe-------cCCCCCeEEEEEECCCC-CEEEEEeCCCEEEEEECCCCcee----EEEccC------
Confidence 2223322 56789999999999999 89999999999999999988654 555555
Q ss_pred cccccccceeEEEEEccCCCEEEEeCCCeEEEEECCC
Q 015363 335 SFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINM 371 (408)
Q Consensus 335 ~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~ 371 (408)
...|.+++|+|++++|++|.|+.|++|+++.
T Consensus 244 ------~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 244 ------TLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp ------SCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred ------CCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 4689999999999999999889999999976
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.6e-34 Score=270.02 Aligned_cols=273 Identities=18% Similarity=0.295 Sum_probs=218.9
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|.+.|.+++|+|++++|++++.||.|++|+..+.. +..+.+|.
T Consensus 299 ~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~------------------------~~~~~~~~---------- 344 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH------------------------LQTLTGHS---------- 344 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE------------------------EEEECCCS----------
T ss_pred EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe------------------------eEEEeCCC----------
Confidence 34689999999999999999999999999999976543 34567777
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.+++|+|+ ++++++++.|+.|++|+.. ++....+..+. ..+. +++|+|+++.+
T Consensus 345 --~~v~~~~~s~~--g~~l~~~~~dg~v~~~~~~-~~~~~~~~~~~--------~~v~-------~~~~s~dg~~l---- 400 (577)
T 2ymu_A 345 --SSVWGVAFSPD--GQTIASASDDKTVKLWNRN-GQLLQTLTGHS--------SSVR-------GVAFSPDGQTI---- 400 (577)
T ss_dssp --SCEEEEEECTT--SSEEEEEETTSEEEEEETT-CCEEEEEECCS--------SCEE-------EEEECTTSSCE----
T ss_pred --CCEEEEEECCC--CCEEEEEeCCCEEEEEcCC-CCEEEEecCCC--------CCeE-------EEEECCCCCEE----
Confidence 77999999654 8899999999999999964 44555444432 2344 68999999988
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++++.|+.|++|+ .. .+....+ .+|...|++++|+|++++|+++ .|+.|++||.. . +...
T Consensus 401 --------~~~~~d~~v~~~~-~~-------~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~-~~~~ 461 (577)
T 2ymu_A 401 --------ASASDDKTVKLWN-RN-------GQLLQTL-TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-G-QLLQ 461 (577)
T ss_dssp --------EEEETTSEEEEEC-TT-------CCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-S-CEEE
T ss_pred --------EEEeCCCEEEEEe-CC-------CCEEEEe-cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-C-CEEE
Confidence 9999999999999 32 2333443 7899999999999999999999 99999999975 3 3333
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
. +.+|...|++++|+|++ ++|++++.|+.|++||.. ++.+ +.+.+| ...|++++|
T Consensus 462 ~-------~~~~~~~v~~~~~spd~-~~las~~~d~~i~iw~~~-~~~~----~~~~~h------------~~~v~~l~~ 516 (577)
T 2ymu_A 462 T-------LTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQLL----QTLTGH------------SSSVRGVAF 516 (577)
T ss_dssp E-------EECCSSCEEEEEECTTS-CEEEEEETTSEEEEEETT-SCEE----EEEECC------------SSCEEEEEE
T ss_pred E-------EcCCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEcCC-CCEE----EEEeCC------------CCCEEEEEE
Confidence 2 56789999999999999 999999999999999964 4333 555555 578999999
Q ss_pred ccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeee-ee--eceeeec
Q 015363 350 ARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFM-GL--DNIHTLY 407 (408)
Q Consensus 350 spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--d~~~~~~ 407 (408)
+|||++|++++ |+.|++||.. +++++++.+|......+....++..+ .. |...++|
T Consensus 517 s~dg~~l~s~~~dg~v~lwd~~--~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 517 SPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECTT--SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred cCCCCEEEEEECcCEEEEEeCC--CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 99999999985 7999999973 68999999999988777765565543 33 4444444
No 40
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7e-34 Score=251.67 Aligned_cols=283 Identities=14% Similarity=0.179 Sum_probs=205.7
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
.+|.+.|++++|+|++++||+|+.||.|+||++.++.. ..+....+.+|.
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-------------------~~~~~~~~~~~~----------- 57 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS-------------------NWELSDSWRAHD----------- 57 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSC-------------------CEEEEEEEECCS-----------
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCC-------------------cceecceeccCC-----------
Confidence 57999999999999999999999999999999986542 233456678888
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc---------EEEEeccCCCCcccCCCCCeEeecCCceeeEEccC
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK---------VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN 182 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 182 (408)
..|++++|+|..++.+|++++.|+.|++||+.+++ ....+..+ .+.+. .+.|+|+
T Consensus 58 -~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~--------~~~v~-------~~~~~~~ 121 (351)
T 3f3f_A 58 -SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS--------KGSLY-------SVKFAPA 121 (351)
T ss_dssp -SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC--------SSCEE-------EEEECCG
T ss_pred -CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc--------CCcee-------EEEEcCC
Confidence 77999999874457899999999999999998763 23333332 22344 7899999
Q ss_pred --CCeeecccccccCccccCCCCCceeeeceeeeccccccccc------cceeeccccccceEEEEeCCC---CCEEEEe
Q 015363 183 --GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAG------CRRIYAHAHDYHINSISNNSD---GETFISA 251 (408)
Q Consensus 183 --~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~i~~~~~---~~~l~~~ 251 (408)
+..+ ++++.|+.|++|| +.......... ........|...+.+++|+|+ +..++++
T Consensus 122 ~~~~~l------------~~~~~dg~v~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~ 188 (351)
T 3f3f_A 122 HLGLKL------------ACLGNDGILRLYD-ALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVS 188 (351)
T ss_dssp GGCSEE------------EEEETTCEEEEEE-CSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEE
T ss_pred CCCcEE------------EEecCCCcEEEec-CCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEe
Confidence 8887 9999999999999 55433221111 011111367788999999997 8999998
Q ss_pred -cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCC---ceEEEEeCCCeEEEEEcCCCceecccccccc-
Q 015363 252 -DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHC---NMLAYSSSKGSIRLIDMRQSALCDTHSKLFE- 326 (408)
Q Consensus 252 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~- 326 (408)
.++.+.+|+... ....... .+.+|...|++++|+|++. .+|++++.||.|++||++.+...........
T Consensus 189 ~~~~~~~~~~~~~-~~~~~~~-----~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 262 (351)
T 3f3f_A 189 ALEQAIIYQRGKD-GKLHVAA-----KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTN 262 (351)
T ss_dssp ETTEEEEEEECTT-SCEEEEE-----ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------
T ss_pred cCCCcEEEEccCC-Cceeeee-----ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccc
Confidence 899997777763 3332221 2678999999999999973 6899999999999999987532100000000
Q ss_pred -----------------------------cccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCce
Q 015363 327 -----------------------------EQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPV 376 (408)
Q Consensus 327 -----------------------------~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~ 376 (408)
..........+.+|...|.+++|+|++++|++++ |+.|++||+.+ ++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~-~~~~ 341 (351)
T 3f3f_A 263 SNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY-SNEF 341 (351)
T ss_dssp ----------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECT-TSCE
T ss_pred eeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCc-Ccch
Confidence 0000012233456788999999999999999985 79999999997 4555
Q ss_pred eeee
Q 015363 377 ATFQ 380 (408)
Q Consensus 377 ~~~~ 380 (408)
+.+.
T Consensus 342 ~~~~ 345 (351)
T 3f3f_A 342 KCMS 345 (351)
T ss_dssp EEEE
T ss_pred hhee
Confidence 4443
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.9e-34 Score=255.98 Aligned_cols=291 Identities=11% Similarity=0.097 Sum_probs=212.4
Q ss_pred eeeccceEEEEECCCC-CeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 32 VQEVDIISAIEFDKSG-DHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~-~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..|.+.|++++|+|++ ++||+|+.||.|+|||+.++... ......+|.
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------------------~~~~~~~h~---------- 118 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT---------------------SFIQGMGPG---------- 118 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE---------------------EEECCCSTT----------
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc---------------------eeeecCCcC----------
Confidence 4689999999999998 99999999999999999866531 112234677
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.+++|+|. ++.+|++++.|+.|++||+.+............ ...+. +++|+|+++.+
T Consensus 119 --~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------~~~v~-------~~~~~~~~~~l---- 178 (383)
T 3ei3_B 119 --DAITGMKFNQF-NTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSW------DYWYC-------CVDVSVSRQML---- 178 (383)
T ss_dssp --CBEEEEEEETT-EEEEEEEEETTTEEEEEETTSCEEEEEECCCCS------SCCEE-------EEEEETTTTEE----
T ss_pred --CceeEEEeCCC-CCCEEEEEeCCCEEEEEECCCCceEEEeccCCC------CCCeE-------EEEECCCCCEE----
Confidence 77999999862 367999999999999999997544333322211 23344 78999999988
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCeEEEEeCCCCC---
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLRINLWNLEISN--- 265 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~iwd~~~~~--- 265 (408)
++++.++.|++|| +. ..+...+ ..|...|.+++|+|+++ +|+++ .|+.|++||++...
T Consensus 179 --------~~~~~d~~i~i~d-~~-------~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 241 (383)
T 3ei3_B 179 --------ATGDSTGRLLLLG-LD-------GHEIFKE-KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN 241 (383)
T ss_dssp --------EEEETTSEEEEEE-TT-------SCEEEEE-ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT
T ss_pred --------EEECCCCCEEEEE-CC-------CCEEEEe-ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc
Confidence 9999999999999 42 2334443 78999999999999998 88988 89999999999532
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcC-CCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCC------Cccccc
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHP-THCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPG------TRSFFT 338 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 338 (408)
..... .+|...|++++|+| ++ .+|++++.|+.|++||+++++.. ..+.+|.... ....+.
T Consensus 242 ~~~~~--------~~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 308 (383)
T 3ei3_B 242 SYIAE--------MPHEKPVNAAYFNPTDS-TKLLTTDQRNEIRVYSSYDWSKP----DQIIIHPHRQFQHLTPIKATWH 308 (383)
T ss_dssp CEEEE--------EECSSCEEEEEECTTTS-CEEEEEESSSEEEEEETTBTTSC----SEEEECCBCCCTTSCCCCCEEC
T ss_pred ceEEE--------ecCCCceEEEEEcCCCC-CEEEEEcCCCcEEEEECCCCccc----cccccccccccccccceEEecc
Confidence 23322 25889999999999 98 99999999999999999988654 4444442110 000010
Q ss_pred cccceeEEEEEccCCCEEEEe-CCCeEEEEECCCCCCceeeeeec--ccccceEEecCCCeee--eeeceeeec
Q 015363 339 EIIASISDIKFARNGRHILSR-DYMTLKLWDINMDSGPVATFQVH--EHLRPKVMHSSKNYFM--GLDNIHTLY 407 (408)
Q Consensus 339 ~h~~~i~~~~~spdg~~l~s~-~d~~v~~wd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~d~~~~~~ 407 (408)
. ...+..++|+|++++ ++ .|+.|++||+.+ ++++..+.+| ......+....++..+ +-|....+|
T Consensus 309 p-~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~-~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw 378 (383)
T 3ei3_B 309 P-MYDLIVAGRYPDDQL--LLNDKRTIDIYDANS-GGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIW 378 (383)
T ss_dssp S-SSSEEEEECBCCTTT--CTTCCCCEEEEETTT-CCEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEE
T ss_pred C-CCCceEEEecCCccc--ccCCCCeEEEEecCC-CceeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEE
Confidence 0 134556777888877 55 479999999998 7999999884 4445554433444443 224444444
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-34 Score=259.67 Aligned_cols=252 Identities=11% Similarity=0.104 Sum_probs=188.5
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
|.++|++++|+|++++||+|+.||.|+||++.++. ++....+.+|. .
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~---------------------~~~~~~~~~h~------------~ 56 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG---------------------WKHARTFSDHD------------K 56 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE---------------------EEECCCBCCCS------------S
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc---------------------eEEEEEEecCC------------c
Confidence 56789999999999999999999999999998652 11345677888 7
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc---EEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK---VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
.|.+++|+|+ +++|++++.|++|++||+.+++ ....+..+ .+.+. ++.|+|+++.+
T Consensus 57 ~v~~~~~s~~--~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~--------~~~v~-------~~~~~~~~~~l---- 115 (377)
T 3dwl_C 57 IVTCVDWAPK--SNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL--------NRAAT-------FVRWSPNEDKF---- 115 (377)
T ss_dssp CEEEEEECTT--TCCEEEEETTSSEEEC------CCCCEEECCCC--------SSCEE-------EEECCTTSSCC----
T ss_pred eEEEEEEeCC--CCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc--------CCceE-------EEEECCCCCEE----
Confidence 7999999755 7899999999999999999876 22222222 22344 78999999987
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccc-cccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCc--
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHA-HDYHINSISNNSDGETFISA-DDLRINLWNLEISNQ-- 266 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~-- 266 (408)
++++.|+.|++|| +..... ....+.+ .. |...|++++|+|++++|+++ .|+.|++||++....
T Consensus 116 --------~~~~~d~~i~iwd-~~~~~~---~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 116 --------AVGSGARVISVCY-FEQEND---WWVSKHL-KRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp --------EEEESSSCEEECC-C--------CCCCEEE-CSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-
T ss_pred --------EEEecCCeEEEEE-ECCccc---ceeeeEe-ecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCC
Confidence 9999999999999 543221 1123333 44 89999999999999999999 999999999863220
Q ss_pred ------------eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCc
Q 015363 267 ------------SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTR 334 (408)
Q Consensus 267 ------------~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 334 (408)
..... ..+ .|...|++++|+|++ ++|++++.|+.|++||++++......+..+.+|
T Consensus 183 ~~~~~~~~~~~~~~~~~----~~~-~~~~~v~~~~~sp~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------ 250 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVC----AEY-PSGGWVHAVGFSPSG-NALAYAGHDSSVTIAYPSAPEQPPRALITVKLS------ 250 (377)
T ss_dssp CCCSCSSCSCCCEEEEE----ECC-CCSSSEEEEEECTTS-SCEEEEETTTEEC-CEECSTTSCEEECCCEECS------
T ss_pred Cccccccccccchhhhh----hcc-cCCceEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCCcceeeEeecCC------
Confidence 01111 124 789999999999999 899999999999999999886421112455555
Q ss_pred cccccccceeEEEEEccCCCEEEEeCCCeEEEEECC
Q 015363 335 SFFTEIIASISDIKFARNGRHILSRDYMTLKLWDIN 370 (408)
Q Consensus 335 ~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~ 370 (408)
...|.+++|+|++++|++|+++.+.+|+..
T Consensus 251 ------~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 251 ------QLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp ------SSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred ------CCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 578999999999999999987666688776
No 43
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.4e-33 Score=244.75 Aligned_cols=244 Identities=12% Similarity=0.214 Sum_probs=195.2
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|...|.+++|+|++++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-----------------------~~~~~~~~~---------- 107 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK-----------------------CLKTLKGHS---------- 107 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-----------------------EEEEEECCS----------
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc-----------------------EEEEEcCCC----------
Confidence 34689999999999999999999999999999988664 345678888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.+++|+|+ +.+|++++.|+.|++||+++++....+..+.. .+. .+.|+|+++.+
T Consensus 108 --~~v~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------~v~-------~~~~~~~~~~l---- 164 (312)
T 4ery_A 108 --NYVFCCNFNPQ--SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------PVS-------AVHFNRDGSLI---- 164 (312)
T ss_dssp --SCEEEEEECSS--SSEEEEEETTSCEEEEETTTCCEEEEECCCSS--------CEE-------EEEECTTSSEE----
T ss_pred --CCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCEEEEEecCCCC--------cEE-------EEEEcCCCCEE----
Confidence 77999999765 78999999999999999999887776655432 344 68999999987
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++++.|+.|++|| +.. .++...+...+...+..++|+|++++|+++ .|+.|++||+++. +...
T Consensus 165 --------~~~~~d~~i~~wd-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~ 228 (312)
T 4ery_A 165 --------VSSSYDGLCRIWD-TAS------GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLK 228 (312)
T ss_dssp --------EEEETTSCEEEEE-TTT------CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEEE
T ss_pred --------EEEeCCCcEEEEE-CCC------CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEE
Confidence 9999999999999 433 223333335566789999999999999999 8999999999844 4443
Q ss_pred EeecCCCcccCCcCCe--EEEEEc-CCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEE
Q 015363 270 IVDVKPANMEDLTEVI--TSAEFH-PTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v--~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
. +.+|.... ....++ +++ .+|++|+.|+.|++||+++++.+ ..+.+| ...|.+
T Consensus 229 ~-------~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~~----~~~~~h------------~~~v~~ 284 (312)
T 4ery_A 229 T-------YTGHKNEKYCIFANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIV----QKLQGH------------TDVVIS 284 (312)
T ss_dssp E-------ECSSCCSSSCCCEEEECSSS-CEEEECCTTSCEEEEETTTCCEE----EEECCC------------SSCEEE
T ss_pred E-------EEecCCceEEEEEEEEeCCC-cEEEEECCCCEEEEEECCCchhh----hhhhcc------------CCcEEE
Confidence 3 34444332 223444 556 89999999999999999988654 566666 478999
Q ss_pred EEEccCCCEEEEeC---CCeEEEEECC
Q 015363 347 IKFARNGRHILSRD---YMTLKLWDIN 370 (408)
Q Consensus 347 ~~~spdg~~l~s~~---d~~v~~wd~~ 370 (408)
++|+|++.+|++++ |++|++|+.+
T Consensus 285 ~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 285 TACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999873 7999999974
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-32 Score=242.36 Aligned_cols=270 Identities=13% Similarity=0.228 Sum_probs=205.1
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeec--cCCcccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQ--SHEPEFDYLKS 108 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~h~~~~~~~~~ 108 (408)
...|.+.|++++|+|++++|++++ ||.|++|++.++... .....+. +|.
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~--------------------~~~~~~~~~~~~-------- 97 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK--------------------SPVSQLDCLNRD-------- 97 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC--------------------SCSEEEECSCTT--------
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce--------------------eeeecccccCCC--------
Confidence 357999999999999999999999 999999999876431 0112222 565
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..|.+++|+|+ +.+|++++.|+.|++||+.+++.........+ ...+. .+.|+|+++.+
T Consensus 98 ----~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~------~~~i~-------~~~~~~~~~~l-- 156 (337)
T 1gxr_A 98 ----NYIRSCKLLPD--GCTLIVGGEASTLSIWDLAAPTPRIKAELTSS------APACY-------ALAISPDSKVC-- 156 (337)
T ss_dssp ----SBEEEEEECTT--SSEEEEEESSSEEEEEECCCC--EEEEEEECS------SSCEE-------EEEECTTSSEE--
T ss_pred ----CcEEEEEEcCC--CCEEEEEcCCCcEEEEECCCCCcceeeecccC------CCceE-------EEEECCCCCEE--
Confidence 77999999754 88999999999999999998873332222211 12233 68999999987
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCce
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~ 267 (408)
++++.++.|++|| +.. .+....+ ..|...+.+++|+|++++|+++ .|+.|++||++.. ..
T Consensus 157 ----------~~~~~dg~v~~~d-~~~------~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-~~ 217 (337)
T 1gxr_A 157 ----------FSCCSDGNIAVWD-LHN------QTLVRQF-QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG-RQ 217 (337)
T ss_dssp ----------EEEETTSCEEEEE-TTT------TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EE
T ss_pred ----------EEEeCCCcEEEEe-CCC------Cceeeee-ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC-ce
Confidence 9999999999999 433 2233333 6788999999999999999999 9999999999944 33
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDI 347 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 347 (408)
... ..+...+.+++|+|++ .+|++++.|+.|++||++++.. ..+..| ...|.++
T Consensus 218 ~~~--------~~~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~~-----~~~~~~------------~~~v~~~ 271 (337)
T 1gxr_A 218 LQQ--------HDFTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPDK-----YQLHLH------------ESCVLSL 271 (337)
T ss_dssp EEE--------EECSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSSCE-----EEECCC------------SSCEEEE
T ss_pred Eee--------ecCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCCe-----EEEcCC------------ccceeEE
Confidence 332 2356789999999999 9999999999999999998753 233334 4789999
Q ss_pred EEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCee
Q 015363 348 KFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYF 397 (408)
Q Consensus 348 ~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (408)
+|+|++++|++++ |+.|++||+.+ ++.+... .|......+....++..
T Consensus 272 ~~~~~~~~l~~~~~dg~i~~~~~~~-~~~~~~~-~~~~~v~~~~~s~~~~~ 320 (337)
T 1gxr_A 272 KFAYCGKWFVSTGKDNLLNAWRTPY-GASIFQS-KESSSVLSCDISVDDKY 320 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTT-CCEEEEE-ECSSCEEEEEECTTSCE
T ss_pred EECCCCCEEEEecCCCcEEEEECCC-CeEEEEe-cCCCcEEEEEECCCCCE
Confidence 9999999999985 79999999997 5666443 45555444443334443
No 45
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.7e-33 Score=249.84 Aligned_cols=280 Identities=10% Similarity=0.085 Sum_probs=205.2
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+| ++|++|+.||.|+||++.+.... ..+.....+.+|.
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-----------------~~~~~~~~~~~h~---------- 62 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-----------------NPKDKSYSHFVHK---------- 62 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-----------------CGGGGEEEEECCT----------
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc-----------------cCCCcceEEecCC----------
Confidence 347999999999998 79999999999999999876521 1233456677888
Q ss_pred cccceeEEEEeec--CCC---cEEEEEeCCCeEEEEEcCCCcE-----EEEeccCCCCcccCCCCCeEeecCCceeeEEc
Q 015363 111 IEEKINKIRWCQS--ANS---ALYLLSTNDKTIKLWKVQEKKV-----KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYM 180 (408)
Q Consensus 111 ~~~~v~~v~~~p~--~~~---~~l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 180 (408)
..|.+++|+|+ .++ .+|++++.|+.|++|++.+++. ...+..+... ...+.+. ++.|+
T Consensus 63 --~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~-------~~~~~ 130 (397)
T 1sq9_A 63 --SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSD---MKKHSFW-------ALKWG 130 (397)
T ss_dssp --TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTT---GGGSCEE-------EEEEE
T ss_pred --CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccc---cCCCcEE-------EEEEe
Confidence 77999999865 226 7999999999999999998774 4444433100 0012344 78999
Q ss_pred ----cCCCe-eecccccccCccccCCCCCceeeeceeeec------cccccccccceeec------cccccceEEEEeCC
Q 015363 181 ----ANGGC-GERNFGCASNDSSFPPGGVSSLRLPVVVTS------QETNLVAGCRRIYA------HAHDYHINSISNNS 243 (408)
Q Consensus 181 ----~~~~~-l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~------~~~~~~v~~i~~~~ 243 (408)
|++.. + ++++.++.|++|| +.. ..... ..+...+. ..|...|.+++|+|
T Consensus 131 ~~~~~~~~~~l------------~~~~~dg~i~iwd-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 196 (397)
T 1sq9_A 131 ASNDRLLSHRL------------VATDVKGTTYIWK-FHPFADESNSLTLN-WSPTLELQGTVESPMTPSQFATSVDISE 196 (397)
T ss_dssp CCC----CEEE------------EEEETTSCEEEEE-EESSSSHHHHTTTC-CCCEEEEEEEECCSSSSCCCCCEEEECT
T ss_pred eccCCCCceEE------------EEEeCCCcEEEEe-CCccccccccceee-ccCcceeeeeeccccCCCCCceEEEECC
Confidence 99998 7 9999999999999 554 21111 00000221 34778899999999
Q ss_pred CCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccC---C---cCCeEEEEEcCCCCceEEEEeCC---CeEEEEEcC
Q 015363 244 DGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMED---L---TEVITSAEFHPTHCNMLAYSSSK---GSIRLIDMR 313 (408)
Q Consensus 244 ~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~ 313 (408)
++ +|+++ .|+.|++||++. ...... +.. | ...|.+++|+|++ .+|++++.| +.|++||++
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~-~~~~~~-------~~~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELST-LRPLYN-------FESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTT-TEEEEE-------EECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETT
T ss_pred Cc-eEEEEeCCCcEEEEECCC-CceeEE-------EeccccccccCCccceEEECCCC-CEEEEEecCCCCceEEEEECC
Confidence 99 99998 899999999994 444433 344 7 8899999999999 999999999 999999999
Q ss_pred CCceecccccccccccCCCC-ccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 314 QSALCDTHSKLFEEQEAPGT-RSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
+++.. ..+.+...+.. ......|...|.+++|+|++++|++++ |+.|++||+++ ++++..+.
T Consensus 267 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~ 330 (397)
T 1sq9_A 267 FGERI----GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT-KERITTLN 330 (397)
T ss_dssp TCCEE----EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-TEEEEEEE
T ss_pred CCccc----ceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC-CceeEEEe
Confidence 88654 44544100000 000011457899999999999999985 79999999998 79999999
No 46
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.7e-33 Score=250.62 Aligned_cols=201 Identities=12% Similarity=0.153 Sum_probs=151.8
Q ss_pred cceeEEEEeecCCCcEEEEE--eCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 113 EKINKIRWCQSANSALYLLS--TNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~--~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..+.+++|+|+ |++++++ +.|++|++||+.+++....+..+ +.|. .++|+|+|+.+
T Consensus 134 ~~~~~v~fSpD--g~~la~as~~~d~~i~iwd~~~~~~~~~~~~~---------~~V~-------~v~fspdg~~l---- 191 (365)
T 4h5i_A 134 DYTKLVYISRE--GTVAAIASSKVPAIMRIIDPSDLTEKFEIETR---------GEVK-------DLHFSTDGKVV---- 191 (365)
T ss_dssp CCEEEEEECTT--SSCEEEEESCSSCEEEEEETTTTEEEEEEECS---------SCCC-------EEEECTTSSEE----
T ss_pred cCEEEEEEcCC--CCEEEEEECCCCCEEEEeECCCCcEEEEeCCC---------CceE-------EEEEccCCceE----
Confidence 55889999755 8887654 47999999999999887766532 2344 78999999987
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCC----eEEEEeCCCCC
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDL----RINLWNLEISN 265 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~----~i~iwd~~~~~ 265 (408)
++++.++.+.+|. ... . .........|...|++++|+|+++.++++ .|+ .+++|++....
T Consensus 192 --------~s~s~~~~~~~~~-~~~-~-----~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~ 256 (365)
T 4h5i_A 192 --------AYITGSSLEVIST-VTG-S-----CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGN 256 (365)
T ss_dssp --------EEECSSCEEEEET-TTC-C-----EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTE
T ss_pred --------EeccceeEEEEEe-ccC-c-----ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccce
Confidence 7777555444443 211 1 11111235788899999999999999987 555 68888887443
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccc-cccccCCCCcccccccccee
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKL-FEEQEAPGTRSFFTEIIASI 344 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~i 344 (408)
...... ..+.+|...|++++|+|+| ++||+|+.|++|+|||+++++.+ .. +.+| ...|
T Consensus 257 ~~~~~~----~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~~~~~----~~~~~gH------------~~~V 315 (365)
T 4h5i_A 257 TSVLRS----KQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKDLSMS----KIFKQAH------------SFAI 315 (365)
T ss_dssp EEEEEE----EEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEE----EEETTSS------------SSCE
T ss_pred ecceee----eeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCCCcEE----EEecCcc------------cCCE
Confidence 322111 1257788999999999999 99999999999999999998654 33 3455 5889
Q ss_pred EEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 345 SDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 345 ~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
++++|||||++||+|+ |++|+|||+..
T Consensus 316 ~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 316 TEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999999996 79999999965
No 47
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-32 Score=260.24 Aligned_cols=273 Identities=18% Similarity=0.327 Sum_probs=218.1
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|...|++++|+|++++|++++.|+.|++|+.... ....+.+|.
T Consensus 258 ~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~------------------------~~~~~~~h~---------- 303 (577)
T 2ymu_A 258 LTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQ------------------------LLQTLTGHS---------- 303 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC------------------------EEEEECCCS----------
T ss_pred EecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc------------------------EEEEEecCC----------
Confidence 3468999999999999999999999999999996432 345678888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.+++|+|+ +.++++++.|++|++||+....... +..+ ...+. +++++|+++.+
T Consensus 304 --~~v~~~~~~~~--~~~l~t~~~d~~i~~w~~~~~~~~~-~~~~--------~~~v~-------~~~~s~~g~~l---- 359 (577)
T 2ymu_A 304 --SSVWGVAFSPD--GQTIASASDDKTVKLWNRNGQHLQT-LTGH--------SSSVW-------GVAFSPDGQTI---- 359 (577)
T ss_dssp --SCEEEEEECTT--SSEEEEEETTSCEEEEETTSCEEEE-ECCC--------SSCEE-------EEEECTTSSEE----
T ss_pred --CCeEEEEECCC--CCEEEEEeCCCeEEEEeCCCCeeEE-EeCC--------CCCEE-------EEEECCCCCEE----
Confidence 77999999754 8899999999999999987665433 3332 22344 68999999998
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++++.++.|++|+ .. ......+ .+|...|++++|+|++++|+++ .|+.|++||.. . +...
T Consensus 360 --------~~~~~dg~v~~~~-~~-------~~~~~~~-~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~-~~~~ 420 (577)
T 2ymu_A 360 --------ASASDDKTVKLWN-RN-------GQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G-QLLQ 420 (577)
T ss_dssp --------EEEETTSEEEEEE-TT-------CCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-C-CEEE
T ss_pred --------EEEeCCCEEEEEc-CC-------CCEEEEe-cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-C-CEEE
Confidence 9999999999999 32 2333443 7889999999999999999999 99999999965 3 3333
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
. +.+|...|++++|+|++ ++|++++.|+.|++||.... .. ..+.+| ...|.+++|
T Consensus 421 ~-------~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~~-~~----~~~~~~------------~~~v~~~~~ 475 (577)
T 2ymu_A 421 T-------LTGHSSSVWGVAFSPDD-QTIASASDDKTVKLWNRNGQ-LL----QTLTGH------------SSSVRGVAF 475 (577)
T ss_dssp E-------EECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSC-EE----EEEECC------------SSCEEEEEE
T ss_pred E-------ecCCCCCeEEEEECCCC-CEEEEEcCCCEEEEEECCCC-EE----EEEcCC------------CCCEEEEEE
Confidence 2 56789999999999999 99999999999999997532 32 455555 578999999
Q ss_pred ccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeeee-e--eceeeec
Q 015363 350 ARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMG-L--DNIHTLY 407 (408)
Q Consensus 350 spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--d~~~~~~ 407 (408)
+||+++|++++ |+.|++||.. +++++.+.+|......+....++..++ . |...+||
T Consensus 476 spd~~~las~~~d~~i~iw~~~--~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp CTTSCEEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred cCCCCEEEEEeCCCEEEEEcCC--CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 99999999985 7999999963 689999999998877776555555443 2 4445554
No 48
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=258.35 Aligned_cols=278 Identities=13% Similarity=0.134 Sum_probs=200.6
Q ss_pred eeeccceEEEEECC-CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 32 VQEVDIISAIEFDK-SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 32 ~~h~~~V~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..|.+.|++++|+| ++++||+|+.||+|+|||+.+.... . .++....+ +|.
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~-~----------------~~~~~~~~-~h~---------- 111 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG-E----------------VYSSSLTY-DCS---------- 111 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT-C----------------CCSCSEEE-ECS----------
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC-c----------------ccceeeec-cCC----------
Confidence 46889999999999 9999999999999999998762110 0 00111122 366
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcC---CCcEEEEeccCCCC-cccC---CCCCeEeecCCceeeE--Ecc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQ---EKKVKKVFDWNVHP-EKAA---GNGPIFGSHVSAIPKS--YMA 181 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~---~~~~~~~~~~~~~~-~~~~---~~~~v~~~~~~~~~~~--~~~ 181 (408)
..|++++|+| ++.+|++++.|++|++||+. +++.......+... ..+. ....+. ++. +++
T Consensus 112 --~~v~~~~~~~--~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~ 180 (437)
T 3gre_A 112 --STVTQITMIP--NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-------RMRAFVNE 180 (437)
T ss_dssp --SCEEEEEECT--TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-------EEEEEECS
T ss_pred --CCEEEEEEeC--CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCce-------EEEEEEcC
Confidence 7799999975 47899999999999999995 55554443332100 0000 111222 333 556
Q ss_pred CCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccc--cccceEEEEeCCCCCEEEEe-cCCeEEE
Q 015363 182 NGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHA--HDYHINSISNNSDGETFISA-DDLRINL 258 (408)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~~~-~d~~i~i 258 (408)
++..+ ++++.|+.|++|| +.. ..+...+ .. |...|++++|+|++++|++| .|+.|++
T Consensus 181 ~~~~l------------~~~~~d~~i~iwd-~~~------~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~i 240 (437)
T 3gre_A 181 EKSLL------------VALTNLSRVIIFD-IRT------LERLQII-ENSPRHGAVSSICIDEECCVLILGTTRGIIDI 240 (437)
T ss_dssp SCEEE------------EEEETTSEEEEEE-TTT------CCEEEEE-ECCGGGCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCEE------------EEEeCCCeEEEEe-CCC------CeeeEEE-ccCCCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 77766 9999999999999 433 2333443 44 78899999999999999999 9999999
Q ss_pred EeCCCCCceeeEeecCCCcccCCcCCeEEEEEcC----CCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCc
Q 015363 259 WNLEISNQSFNIVDVKPANMEDLTEVITSAEFHP----THCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTR 334 (408)
Q Consensus 259 wd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 334 (408)
||++. ......+ ...|...|++++|+| ++ .+|++|+.|+.|++||+++++.. ..+.+|......
T Consensus 241 wd~~~-~~~~~~~------~~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~ 308 (437)
T 3gre_A 241 WDIRF-NVLIRSW------SFGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFLTIWNFVKGHCQ----YAFINSDEQPSM 308 (437)
T ss_dssp EETTT-TEEEEEE------BCTTCEEEEEEEECTTTCTTE-EEEEEESTTEEEEEEETTTTEEE----EEEESSSSCCCG
T ss_pred EEcCC-ccEEEEE------ecCCCCceEEEEeccccCCCc-cEEEEEcCCCcEEEEEcCCCcEE----EEEEcCCCCCcc
Confidence 99994 4444432 125677899996654 56 79999999999999999988654 455544321111
Q ss_pred c------------cccc--ccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec
Q 015363 335 S------------FFTE--IIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 335 ~------------~~~~--h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
. .+.+ |...|.+++|+ ++++|++|+ |+.|++||+.+ ++.++.+.+|
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~ 369 (437)
T 3gre_A 309 EHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE-LSSSKAVISP 369 (437)
T ss_dssp GGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC-GGGCEEEECC
T ss_pred ceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC-cccceEEecc
Confidence 1 1333 88899999999 789999986 79999999997 6888888774
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=248.62 Aligned_cols=287 Identities=14% Similarity=0.216 Sum_probs=203.1
Q ss_pred ceeeccceEEEEECC-CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 31 EVQEVDIISAIEFDK-SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
...|.+.|++++|+| ++++||+|+.||.|+||++.++.......... . .........+|.
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~--------- 99 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA--V--------CSIGRDHPDVHR--------- 99 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE--E--------EEECTTCTTCCS---------
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc--c--------ccccccccccCC---------
Confidence 346999999999999 99999999999999999998775420000000 0 000000112455
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCC---Cee
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANG---GCG 186 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~l 186 (408)
..|.+++|+|. ++.+|++++.|+.|++||+.+++....+.... .+. .+.+.+.+ ..+
T Consensus 100 ---~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---------~~~-------~~~~~~~~~~~~~~ 159 (408)
T 4a11_B 100 ---YSVETVQWYPH-DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEE---------TVY-------SHHMSPVSTKHCLV 159 (408)
T ss_dssp ---SCEEEEEECTT-CTTCEEEEETTSEEEEEETTTTEEEEEEECSS---------CEE-------EEEECSSCSSCCEE
T ss_pred ---CcEEEEEEccC-CCcEEEEEeCCCeEEEeeCCCCccceeccCCC---------cee-------eeEeecCCCCCcEE
Confidence 77999999762 35699999999999999999998877665432 222 56676644 355
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCeEEEEeCCCC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLRINLWNLEIS 264 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~iwd~~~~ 264 (408)
++++.++.|++|| +.. ..+...+ ..|...|++++|+|+++ +|+++ .|+.|++||++..
T Consensus 160 ------------~~~~~~~~v~~~d-~~~------~~~~~~~-~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 160 ------------AVGTRGPKVQLCD-LKS------GSCSHIL-QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp ------------EEEESSSSEEEEE-SSS------SCCCEEE-CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred ------------EEEcCCCeEEEEe-CCC------cceeeee-cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 8999999999999 543 2233343 68889999999999998 58888 8999999999866
Q ss_pred CceeeEeecC--------CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccc--------
Q 015363 265 NQSFNIVDVK--------PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQ-------- 328 (408)
Q Consensus 265 ~~~~~~~~~~--------~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------- 328 (408)
......+... ......|...|.+++|+|++ .+|++++.|+.|++||+++++... .+..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~----~~~~~~~~~~~~~ 294 (408)
T 4a11_B 220 SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG-LHLLTVGTDNRMRLWNSSNGENTL----VNYGKVCNNSKKG 294 (408)
T ss_dssp SCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCBCC----CCCCCCCCCCSSC
T ss_pred CcccccccccccccceeeccccccccCceeEEEEcCCC-CEEEEecCCCeEEEEECCCCccce----ecccccccccccc
Confidence 5444432110 01235788999999999999 999999999999999999875431 11100
Q ss_pred ---------------------------cCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 329 ---------------------------EAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 329 ---------------------------~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
........+.+|...|.+++|+|++++|++++ ||.|++||+++ ++++....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~-~~~~~~~~ 373 (408)
T 4a11_B 295 LKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL-YEPVPDDD 373 (408)
T ss_dssp CCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------
T ss_pred ceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC-CCccCCCC
Confidence 01122334567889999999999999999985 79999999997 56666554
Q ss_pred ec
Q 015363 381 VH 382 (408)
Q Consensus 381 ~~ 382 (408)
.+
T Consensus 374 ~~ 375 (408)
T 4a11_B 374 ET 375 (408)
T ss_dssp --
T ss_pred ce
Confidence 43
No 50
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-33 Score=254.17 Aligned_cols=272 Identities=10% Similarity=0.141 Sum_probs=204.0
Q ss_pred CcccceeeecccCcCcccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccce
Q 015363 13 QPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRY 92 (408)
Q Consensus 13 ~~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 92 (408)
.-..|++...-.. .......|...|++++|+|++++|++|+.||.|+||++.+... ..+.
T Consensus 46 ~v~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~-------------------~~~~ 105 (416)
T 2pm9_A 46 SLELWSLLAADSE-KPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANN-------------------AINS 105 (416)
T ss_dssp CCEEEESSSGGGC-SCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTS-------------------CCCE
T ss_pred eEEEEEccCCCCC-cEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccc-------------------cccc
Confidence 4556777642111 1223457899999999999999999999999999999876321 1124
Q ss_pred eeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc------EEEEeccCCCCcccCCCCC
Q 015363 93 KTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK------VKKVFDWNVHPEKAAGNGP 166 (408)
Q Consensus 93 ~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~ 166 (408)
...+.+|. ..|++++|+|+ ++.+|++++.|+.|++||+.+++ ........ ....+.
T Consensus 106 ~~~~~~h~------------~~v~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~~ 167 (416)
T 2pm9_A 106 MARFSNHS------------SSVKTVKFNAK-QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS-----MSSVDE 167 (416)
T ss_dssp EEECCCSS------------SCCCEEEECSS-STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS-----CCSSCC
T ss_pred hhhccCCc------------cceEEEEEcCC-CCCEEEEEcCCCeEEEEECCCCccccccccccccccc-----cCCCCC
Confidence 55677888 77999999754 25699999999999999999875 21111000 001223
Q ss_pred eEeecCCceeeEEccC-CCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeec-----cccccceEEEE
Q 015363 167 IFGSHVSAIPKSYMAN-GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYA-----HAHDYHINSIS 240 (408)
Q Consensus 167 v~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~i~ 240 (408)
+. +++|+|+ +..+ ++++.++.|++|| +... .+...+. .+|...+.+++
T Consensus 168 v~-------~~~~~~~~~~~l------------~~~~~dg~v~iwd-~~~~------~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 168 VI-------SLAWNQSLAHVF------------ASAGSSNFASIWD-LKAK------KEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp CC-------EEEECSSCTTEE------------EEESSSSCEEEEE-TTTT------EEEEEECCCCCSSCCCCCEEEEE
T ss_pred ee-------EEEeCCCCCcEE------------EEEcCCCCEEEEE-CCCC------CcceEEeccccccccCCceEEEE
Confidence 33 7899999 5665 8999999999999 5432 2222221 12378899999
Q ss_pred eCCCC-CEEEEe-cCC---eEEEEeCCCCCceeeEeecCCCccc-CCcCCeEEEEEcC-CCCceEEEEeCCCeEEEEEcC
Q 015363 241 NNSDG-ETFISA-DDL---RINLWNLEISNQSFNIVDVKPANME-DLTEVITSAEFHP-THCNMLAYSSSKGSIRLIDMR 313 (408)
Q Consensus 241 ~~~~~-~~l~~~-~d~---~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~ 313 (408)
|+|++ .+++++ .|+ .|++||++........ +. +|...|++++|+| ++ .+|++++.|+.|++||++
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT-------LNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWNPE 293 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC-------CCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEECSS
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE-------eecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEeeCC
Confidence 99997 688888 787 9999999965444432 55 7899999999999 77 999999999999999999
Q ss_pred CCceecccccccccccCCCCccccccccceeEEEEEccCC-CEEEEeC-CCeEEEEECCCC
Q 015363 314 QSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNG-RHILSRD-YMTLKLWDINMD 372 (408)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg-~~l~s~~-d~~v~~wd~~~~ 372 (408)
+++.+ ..+.+| ...|.+++|+|++ .+|++++ |+.|++||+...
T Consensus 294 ~~~~~----~~~~~~------------~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 294 SAEQL----SQFPAR------------GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp SCCEE----EEEECS------------SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred CCccc----eeecCC------------CCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 88654 555555 4789999999999 8999986 799999999873
No 51
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-32 Score=243.19 Aligned_cols=281 Identities=12% Similarity=0.083 Sum_probs=209.8
Q ss_pred eeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
.|.+.|++++|+|++++|++|+.||.|+||++.++... .....+.+|.
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~--------------------~~~~~~~~~~------------ 56 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN--------------------VDLLQSLRYK------------ 56 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE--------------------EEEEEEEECS------------
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc--------------------ccceeeeecC------------
Confidence 69999999999999999999999999999999866410 1123445676
Q ss_pred cceeEEEEeecCCCc-EEEEEeCCCeEEEEEc-CCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 113 EKINKIRWCQSANSA-LYLLSTNDKTIKLWKV-QEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~-~l~~~~~d~~i~vwd~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|++++|+|+ +. +|++++.||.|++||+ .+++... +....+ .+.+. .+.|+| +..+
T Consensus 57 ~~v~~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~------~~~v~-------~l~~~~-~~~l---- 115 (342)
T 1yfq_A 57 HPLLCCNFIDN--TDLQIYVGTVQGEILKVDLIGSPSFQA-LTNNEA------NLGIC-------RICKYG-DDKL---- 115 (342)
T ss_dssp SCEEEEEEEES--SSEEEEEEETTSCEEEECSSSSSSEEE-CBSCCC------CSCEE-------EEEEET-TTEE----
T ss_pred CceEEEEECCC--CCcEEEEEcCCCeEEEEEeccCCceEe-ccccCC------CCceE-------EEEeCC-CCEE----
Confidence 77999999876 88 9999999999999999 8876533 222001 23344 689999 8877
Q ss_pred ccccCccccCCCCCceeeeceeeeccccc---cccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCC-CC
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETN---LVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEI-SN 265 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~-~~ 265 (408)
++++.|+.|++|| +...... ....+...+ .|...+.+++|+|++ ++++ .|+.|++||++. ..
T Consensus 116 --------~s~~~d~~i~iwd-~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~ 182 (342)
T 1yfq_A 116 --------IAASWDGLIEVID-PRNYGDGVIAVKNLNSNNT--KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCED 182 (342)
T ss_dssp --------EEEETTSEEEEEC-HHHHTTBCEEEEESCSSSS--SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTT
T ss_pred --------EEEcCCCeEEEEc-ccccccccccccCCeeeEE--eeCCceEEEEecCCc--EEEEeCCCeEEEEECCcccc
Confidence 9999999999999 5431000 002223332 377899999999988 7777 999999999996 43
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcC-CCCceEEEEeCCCeEEEEEcCCC--ceecccccccccccCCCCccccccccc
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHP-THCNMLAYSSSKGSIRLIDMRQS--ALCDTHSKLFEEQEAPGTRSFFTEIIA 342 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~ 342 (408)
...... ...|...+.+++|+| ++ .+|++++.||.|++|+++.. .........+..|.... .-.+|..
T Consensus 183 ~~~~~~------~~~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 252 (342)
T 1yfq_A 183 DNGTIE------ESGLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL---KDTNLAY 252 (342)
T ss_dssp CCCEEE------ECSCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT---TCCSSCC
T ss_pred ccceee------ecCCCCceeEEEECCCCC-CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc---cccccce
Confidence 332221 345778899999999 99 89999999999999999876 11112225555553110 0113445
Q ss_pred eeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec-ccccceEE
Q 015363 343 SISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH-EHLRPKVM 390 (408)
Q Consensus 343 ~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~-~~~~~~~~ 390 (408)
.|.+++|+|++++|++++ |+.|++||+.+ ++++..+.+| ......+.
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQT-RKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSSEEEEEE
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCcc-HhHhhhhhcccCCCceEec
Confidence 899999999999999985 79999999997 7899999998 77777766
No 52
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.5e-32 Score=269.03 Aligned_cols=264 Identities=15% Similarity=0.181 Sum_probs=217.9
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|++++||+|+.||.|+|||+.++. .+..+.+|.
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~-----------------------~~~~~~~~~---------- 55 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV-----------------------EVRSIQVTE---------- 55 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----------------------EEEEEECCS----------
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc-----------------------eEEEEecCC----------
Confidence 35799999999999999999999999999999987764 345677888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|++++|+|+ +.+|++++.||.|++||+.+++....+..+. +.+. .++|+|+++.+
T Consensus 56 --~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--------~~v~-------~~~~s~~~~~l---- 112 (814)
T 3mkq_A 56 --TPVRAGKFIAR--KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP--------DYIR-------SIAVHPTKPYV---- 112 (814)
T ss_dssp --SCEEEEEEEGG--GTEEEEEETTSEEEEEETTTCCEEEEEECCS--------SCEE-------EEEECSSSSEE----
T ss_pred --CcEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcEEEEEecCC--------CCEE-------EEEEeCCCCEE----
Confidence 77999999876 8899999999999999999998877776543 2344 78999999987
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
++++.|+.|++|+ +... ...... ..+|...|.+++|+| ++..|+++ .|+.|++||+.......
T Consensus 113 --------~~~~~dg~i~vw~-~~~~-----~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 113 --------LSGSDDLTVKLWN-WENN-----WALEQT-FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp --------EEEETTSEEEEEE-GGGT-----SEEEEE-EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred --------EEEcCCCEEEEEE-CCCC-----ceEEEE-EcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 9999999999999 4321 122233 378889999999999 78899998 89999999998554443
Q ss_pred eEeecCCCcccCCcCCeEEEEEcC--CCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEE
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHP--THCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
.. ...+...+.+++|+| ++ .+|++++.||.|++||+++++.. ..+.+| ...|.+
T Consensus 178 ~~-------~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~----~~~~~~------------~~~v~~ 233 (814)
T 3mkq_A 178 TL-------TTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKSCV----ATLEGH------------MSNVSF 233 (814)
T ss_dssp EE-------ECCCTTCCCEEEECCSTTC-CEEEEECTTSEEEEEETTTTEEE----EEEECC------------SSCEEE
T ss_pred EE-------ecCCCCCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCCCcEE----EEEcCC------------CCCEEE
Confidence 32 233457899999999 88 89999999999999999987543 555555 478999
Q ss_pred EEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEE
Q 015363 347 IKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVM 390 (408)
Q Consensus 347 ~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
++|+|++.+|++++ |+.|++||+.+ ++.+..+..|......+.
T Consensus 234 ~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~v~~~~ 277 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGTLKIWNSST-YKVEKTLNVGLERSWCIA 277 (814)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTT-CSEEEEECCSSSSEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEEeecCCCcEEEEE
Confidence 99999999999985 79999999997 788999888876655554
No 53
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-32 Score=247.87 Aligned_cols=279 Identities=16% Similarity=0.235 Sum_probs=210.6
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
|.+.|++++|+|++++|++|+.||.|++|+.. +. ....+.+|. .
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~-----------------------~~~~~~~~~------------~ 150 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-GA-----------------------LLNVLNFHR------------A 150 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-SC-----------------------EEEEECCCC------------S
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CC-----------------------eeeeccCCC------------c
Confidence 68899999999999999999999999999932 22 345677887 7
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
.|.+++|+|+ +.+|++++.|+.|++||+.+++....+..+.....................+.|++++..
T Consensus 151 ~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 220 (425)
T 1r5m_A 151 PIVSVKWNKD--GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKF-------- 220 (425)
T ss_dssp CEEEEEECTT--SSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEE--------
T ss_pred cEEEEEECCC--CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEE--------
Confidence 7999999754 889999999999999999999887776654432100000000000011226778877653
Q ss_pred cCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEee
Q 015363 194 SNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVD 272 (408)
Q Consensus 194 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~ 272 (408)
++++.++.|++|+ +.. ......+ ..|...|.+++|+|++++|+++ .|+.|++||++... ....
T Consensus 221 -----~~~~~~g~i~~~d-~~~------~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~-- 284 (425)
T 1r5m_A 221 -----VIPGPKGAIFVYQ-ITE------KTPTGKL-IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN-SQNC-- 284 (425)
T ss_dssp -----EEECGGGCEEEEE-TTC------SSCSEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS-CSEE--
T ss_pred -----EEEcCCCeEEEEE-cCC------Cceeeee-ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc-cceE--
Confidence 7888999999999 433 2233333 6788999999999999999999 89999999999544 3332
Q ss_pred cCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccC
Q 015363 273 VKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARN 352 (408)
Q Consensus 273 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spd 352 (408)
+..|...|.+++|+|++ ++++++.|+.|++||+++++.. ..+..| ...|.+++|+|+
T Consensus 285 -----~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~----~~~~~~------------~~~i~~~~~s~~ 341 (425)
T 1r5m_A 285 -----FYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLL----ALSIVD------------GVPIFAGRISQD 341 (425)
T ss_dssp -----ECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEE----EEEECT------------TCCEEEEEECTT
T ss_pred -----ecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEe----EecccC------------CccEEEEEEcCC
Confidence 46688999999999998 8899999999999999988654 455554 468999999999
Q ss_pred CCEEEEeC-CCeEEEEECCCCCC--------------------ceeeeeeccc--ccceEEecCCCeee
Q 015363 353 GRHILSRD-YMTLKLWDINMDSG--------------------PVATFQVHEH--LRPKVMHSSKNYFM 398 (408)
Q Consensus 353 g~~l~s~~-d~~v~~wd~~~~~~--------------------~~~~~~~~~~--~~~~~~~~~~~~~~ 398 (408)
+++|++++ |+.|++||+++ ++ ++..+.+|.. ....+....++..+
T Consensus 342 ~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 409 (425)
T 1r5m_A 342 GQKYAVAFMDGQVNVYDLKK-LNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI 409 (425)
T ss_dssp SSEEEEEETTSCEEEEECHH-HHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEE
T ss_pred CCEEEEEECCCeEEEEECCC-CccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceE
Confidence 99999985 79999999987 56 7889999865 55555544444443
No 54
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-32 Score=235.23 Aligned_cols=266 Identities=16% Similarity=0.170 Sum_probs=207.0
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++| |++++|++|+.||.|++||+.++. ....+..|.
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-----------------------~~~~~~~~~---------- 59 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-----------------------LGTVVYTGQ---------- 59 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-----------------------EEEEEEECS----------
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-----------------------EEEEeecCC----------
Confidence 3579999999999 999999999999999999997654 245566777
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc---EEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK---VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
..|.+++|+|+ +.++++++.|+.|++|++.... ....+..+ .+.+. ++.| ++..+
T Consensus 60 --~~v~~~~~~~~--~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~--------~~~i~-------~~~~--~~~~l- 117 (313)
T 3odt_A 60 --GFLNSVCYDSE--KELLLFGGKDTMINGVPLFATSGEDPLYTLIGH--------QGNVC-------SLSF--QDGVV- 117 (313)
T ss_dssp --SCEEEEEEETT--TTEEEEEETTSCEEEEETTCCTTSCC-CEECCC--------SSCEE-------EEEE--ETTEE-
T ss_pred --ccEEEEEECCC--CCEEEEecCCCeEEEEEeeecCCCCcccchhhc--------ccCEE-------EEEe--cCCEE-
Confidence 77999999765 8899999999999999987642 22233222 22233 4555 56665
Q ss_pred cccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEEEEeCCCCC
Q 015363 188 RNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.++.|++|| . ...... ...|...+.+++|.| +++.++++ .|+.|++||..
T Consensus 118 -----------~~~~~d~~i~~~d-~--------~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--- 173 (313)
T 3odt_A 118 -----------ISGSWDKTAKVWK-E--------GSLVYN-LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--- 173 (313)
T ss_dssp -----------EEEETTSEEEEEE-T--------TEEEEE-EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT---
T ss_pred -----------EEEeCCCCEEEEc-C--------CcEEEe-cccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC---
Confidence 9999999999998 1 122233 367889999999988 88999998 99999999944
Q ss_pred ceeeEeecCCCcccC-CcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccccccee
Q 015363 266 QSFNIVDVKPANMED-LTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI 344 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 344 (408)
..... +.. |...+.+++|+|++ . +++++.|+.|++||+++++.. ..+.+| ...|
T Consensus 174 ~~~~~-------~~~~~~~~i~~~~~~~~~-~-~~~~~~dg~i~i~d~~~~~~~----~~~~~~------------~~~i 228 (313)
T 3odt_A 174 KVIKT-------FSGIHNDVVRHLAVVDDG-H-FISCSNDGLIKLVDMHTGDVL----RTYEGH------------ESFV 228 (313)
T ss_dssp EEEEE-------ECSSCSSCEEEEEEEETT-E-EEEEETTSEEEEEETTTCCEE----EEEECC------------SSCE
T ss_pred ceEEE-------EeccCcccEEEEEEcCCC-e-EEEccCCCeEEEEECCchhhh----hhhhcC------------CceE
Confidence 22222 233 78899999999999 6 899999999999999988654 555555 4789
Q ss_pred EEEEEccCCCEEEEe-CCCeEEEEECCCCCCceeeeeecccccceEEecCCCeeeeeece
Q 015363 345 SDIKFARNGRHILSR-DYMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMGLDNI 403 (408)
Q Consensus 345 ~~~~~spdg~~l~s~-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 403 (408)
.+++|+|++. |+++ .|+.|++||+++ ++++..+..|......+....++.+++....
T Consensus 229 ~~~~~~~~~~-l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d 286 (313)
T 3odt_A 229 YCIKLLPNGD-IVSCGEDRTVRIWSKEN-GSLKQVITLPAISIWSVDCMSNGDIIVGSSD 286 (313)
T ss_dssp EEEEECTTSC-EEEEETTSEEEEECTTT-CCEEEEEECSSSCEEEEEECTTSCEEEEETT
T ss_pred EEEEEecCCC-EEEEecCCEEEEEECCC-CceeEEEeccCceEEEEEEccCCCEEEEeCC
Confidence 9999999996 5555 689999999998 7999999999887777766666666655443
No 55
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=250.20 Aligned_cols=294 Identities=13% Similarity=0.199 Sum_probs=214.5
Q ss_pred eeeccceEEEEECCCCC-eEEEe----------ecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCC
Q 015363 32 VQEVDIISAIEFDKSGD-HLATG----------DRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHE 100 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~-~l~sg----------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~ 100 (408)
+.+...|.+++|+|+++ +||+| +.|+.|+||++.++... +.+.. ..|.
T Consensus 9 l~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~--------------------~~~~~-~~~~ 67 (416)
T 2pm9_A 9 LAEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--------------------KPIAS-LQVD 67 (416)
T ss_dssp -CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC--------------------SCSCC-CCCS
T ss_pred HhhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC--------------------cEEEE-EecC
Confidence 45667899999999987 99999 88999999999876421 01111 2344
Q ss_pred cccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCC----CcEEEEeccCCCCcccCCCCCeEeecCCcee
Q 015363 101 PEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQE----KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIP 176 (408)
Q Consensus 101 ~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (408)
..|++++|+|+ +.+|++++.|+.|++||+.+ .+....+..+. +.+. +
T Consensus 68 ------------~~v~~~~~s~~--~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~--------~~v~-------~ 118 (416)
T 2pm9_A 68 ------------SKFNDLDWSHN--NKIIAGALDNGSLELYSTNEANNAINSMARFSNHS--------SSVK-------T 118 (416)
T ss_dssp ------------SCEEEEEECSS--SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSS--------SCCC-------E
T ss_pred ------------CceEEEEECCC--CCeEEEEccCCeEEEeecccccccccchhhccCCc--------cceE-------E
Confidence 77999999755 88999999999999999987 33444444332 2333 6
Q ss_pred eEEccC-CCeeecccccccCccccCCCCCceeeeceeeecccccc---ccccceeeccccccceEEEEeCCC-CCEEEEe
Q 015363 177 KSYMAN-GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNL---VAGCRRIYAHAHDYHINSISNNSD-GETFISA 251 (408)
Q Consensus 177 ~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~ 251 (408)
+.|+|+ +..+ ++++.|+.|++|| +....... ....... ...|...|.+++|+|+ +.+|+++
T Consensus 119 ~~~~~~~~~~l------------~s~~~dg~v~iwd-~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 119 VKFNAKQDNVL------------ASGGNNGEIFIWD-MNKCTESPSNYTPLTPGQ-SMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp EEECSSSTTBE------------EEECSSSCEEBCB-TTTTSSCTTTCCCBCCCC-SCCSSCCCCEEEECSSCTTEEEEE
T ss_pred EEEcCCCCCEE------------EEEcCCCeEEEEE-CCCCcccccccccccccc-ccCCCCCeeEEEeCCCCCcEEEEE
Confidence 899998 7776 9999999999999 54433100 0001111 2578889999999999 7899998
Q ss_pred -cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCC---eEEEEEcCCCceecccccccc-
Q 015363 252 -DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG---SIRLIDMRQSALCDTHSKLFE- 326 (408)
Q Consensus 252 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~- 326 (408)
.|+.|++||++.. .....+... ....+|...+.+++|+|++..+|++++.|+ .|++||++++... +..+.
T Consensus 185 ~~dg~v~iwd~~~~-~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~---~~~~~~ 259 (416)
T 2pm9_A 185 GSSNFASIWDLKAK-KEVIHLSYT-SPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP---LQTLNQ 259 (416)
T ss_dssp SSSSCEEEEETTTT-EEEEEECCC-CCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC---SBCCCS
T ss_pred cCCCCEEEEECCCC-CcceEEecc-ccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC---cEEeec
Confidence 8999999999954 443332110 112234788999999999867999999998 9999999986422 24444
Q ss_pred cccCCCCccccccccceeEEEEEcc-CCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCC-eeeee---
Q 015363 327 EQEAPGTRSFFTEIIASISDIKFAR-NGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKN-YFMGL--- 400 (408)
Q Consensus 327 ~~~~~~~~~~~~~h~~~i~~~~~sp-dg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 400 (408)
+| ...|.+++|+| ++++|++++ |+.|++||+++ ++++..+.+|......+....++ .+++.
T Consensus 260 ~~------------~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 260 GH------------QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASF 326 (416)
T ss_dssp CC------------SSCEEEEEECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEEEECCS
T ss_pred Cc------------cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEEEEEec
Confidence 44 57899999999 899999985 79999999998 79999999998877666654444 34322
Q ss_pred eceeeec
Q 015363 401 DNIHTLY 407 (408)
Q Consensus 401 d~~~~~~ 407 (408)
|...++|
T Consensus 327 d~~i~iw 333 (416)
T 2pm9_A 327 DNKIEVQ 333 (416)
T ss_dssp SSEEEEE
T ss_pred CCcEEEE
Confidence 4444444
No 56
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-33 Score=269.11 Aligned_cols=261 Identities=15% Similarity=0.252 Sum_probs=203.1
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.++|++++|+|++++|++|+.||.|+||++.++. .+....+.+|.
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~---------------------~~~~~~l~~h~---------- 53 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET---------------------HKLIDTLTGHE---------- 53 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE---------------------EEEEEEECCCS----------
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC---------------------CccceeccCCc----------
Confidence 35799999999999999999999999999999987442 22456788888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccC--CCeeec
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN--GGCGER 188 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~l~~ 188 (408)
..|++++|+|+.++.+|++++.||.|++||+.+++.........+ .+.+. ++.|+|+ +..+
T Consensus 54 --~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h------~~~V~-------~v~~sp~~~~~~l-- 116 (753)
T 3jro_A 54 --GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH------SASVN-------SVQWAPHEYGPLL-- 116 (753)
T ss_dssp --SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCC------SSCEE-------EEEECCGGGCSEE--
T ss_pred --CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCC------CCCeE-------EEEECCCCCCCEE--
Confidence 779999998766688999999999999999999874333333222 22344 7899999 8887
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-------------CCCEEEEe-cCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-------------DGETFISA-DDL 254 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-------------~~~~l~~~-~d~ 254 (408)
++++.|+.|++|| +...... .... ..+|...|.+++|+| ++.+|++| .||
T Consensus 117 ----------~sgs~dg~I~vwd-l~~~~~~----~~~~-~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg 180 (753)
T 3jro_A 117 ----------LVASSDGKVSVVE-FKENGTT----SPII-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (753)
T ss_dssp ----------EEEETTSEEEEEE-CCSSSCC----CCEE-EECCSSCEEEEEECCCC---------CGGGCCEEEEETTS
T ss_pred ----------EEEeCCCcEEEEE-eecCCCc----ceeE-eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC
Confidence 9999999999999 5443211 1112 368889999999999 58899998 999
Q ss_pred eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCC---CCceEEEEeCCCeEEEEEcCCCcee-cccccccccccC
Q 015363 255 RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPT---HCNMLAYSSSKGSIRLIDMRQSALC-DTHSKLFEEQEA 330 (408)
Q Consensus 255 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~ 330 (408)
.|++||++......... ..+.+|...|++++|+|+ + .+|++++.||.|++||++++... ......
T Consensus 181 ~I~iwd~~~~~~~~~~~----~~~~~h~~~V~~l~~sp~~~~~-~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~------ 249 (753)
T 3jro_A 181 LVKIWKYNSDAQTYVLE----STLEGHSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQGPWKKTLLK------ 249 (753)
T ss_dssp CEEEEEEETTTTEEEEE----EEECCCSSCEEEEEECCCCSSS-EEEEEEESSSCEEEEEESSSSSCCBCCBSS------
T ss_pred eEEEEeccCCcccceee----eeecCCCCcEEEEEeccCCCCC-CEEEEEecCCEEEEecCCCCCCcceeEEec------
Confidence 99999998654432222 126789999999999999 7 99999999999999999986421 001111
Q ss_pred CCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCC
Q 015363 331 PGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMD 372 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~ 372 (408)
...|...|.+++|+|+|++|++|+ ||.|++|+++..
T Consensus 250 ------~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 250 ------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp ------SSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred ------cCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 123457899999999999999985 799999999863
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-31 Score=236.07 Aligned_cols=240 Identities=11% Similarity=0.149 Sum_probs=196.1
Q ss_pred eeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
.|...|.+++|+|++++|++|+.||.|++||+.+++. .....+..|.
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---------------------~~~~~~~~~~------------ 141 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP---------------------RIKAELTSSA------------ 141 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------------------EEEEEEECSS------------
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc---------------------ceeeecccCC------------
Confidence 6889999999999999999999999999999887642 1344567777
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..|.+++|+|+ +.++++++.|+.|++||+.+++....+..+. +.+. .+.|+|+++.+
T Consensus 142 ~~i~~~~~~~~--~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~--------~~i~-------~~~~~~~~~~l------ 198 (337)
T 1gxr_A 142 PACYALAISPD--SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT--------DGAS-------CIDISNDGTKL------ 198 (337)
T ss_dssp SCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEECCCS--------SCEE-------EEEECTTSSEE------
T ss_pred CceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCceeeeeeccc--------CceE-------EEEECCCCCEE------
Confidence 67999999754 7899999999999999999988777665542 2344 68999999987
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEe
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~ 271 (408)
++++.++.|++|| +... +.... ..+...+.+++|+|++++|+++ .++.|++||++... ...
T Consensus 199 ------~~~~~dg~i~~~d-~~~~------~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-~~~-- 260 (337)
T 1gxr_A 199 ------WTGGLDNTVRSWD-LREG------RQLQQ--HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-KYQ-- 260 (337)
T ss_dssp ------EEEETTSEEEEEE-TTTT------EEEEE--EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-EEE--
T ss_pred ------EEEecCCcEEEEE-CCCC------ceEee--ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-eEE--
Confidence 8999999999999 4332 22222 2466789999999999999999 89999999999543 322
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEcc
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFAR 351 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 351 (408)
+..|...|.+++|+|++ ++|++++.|+.|++||+.+++.. .. ..+ ...|.+++|+|
T Consensus 261 ------~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~----~~-~~~------------~~~v~~~~~s~ 316 (337)
T 1gxr_A 261 ------LHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYGASI----FQ-SKE------------SSSVLSCDISV 316 (337)
T ss_dssp ------ECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE----EE-EEC------------SSCEEEEEECT
T ss_pred ------EcCCccceeEEEECCCC-CEEEEecCCCcEEEEECCCCeEE----EE-ecC------------CCcEEEEEECC
Confidence 46788999999999999 89999999999999999988653 11 122 36899999999
Q ss_pred CCCEEEEeC-CCeEEEEECC
Q 015363 352 NGRHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 352 dg~~l~s~~-d~~v~~wd~~ 370 (408)
++++|++++ |+.|++|++.
T Consensus 317 ~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 317 DDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TSCEEEEEETTSCEEEEEEE
T ss_pred CCCEEEEecCCCeEEEEEEe
Confidence 999999985 7999999973
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-31 Score=247.45 Aligned_cols=275 Identities=15% Similarity=0.155 Sum_probs=203.8
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|++ +|++|+.||+|++||+.+++ ....+.+|.
T Consensus 158 ~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~-----------------------~~~~~~~h~---------- 203 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC-----------------------CTHVFEGHN---------- 203 (464)
T ss_dssp ECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE-----------------------EEEEECCCS----------
T ss_pred EeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc-----------------------EEEEECCCC----------
Confidence 34699999999999988 89999999999999998765 345678888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCc--ccCCCC--CeE-e-ecCCceeeEEccCCC
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPE--KAAGNG--PIF-G-SHVSAIPKSYMANGG 184 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~--~v~-~-~~~~~~~~~~~~~~~ 184 (408)
..|.+++|+|.+++.++++++.|++|++||+.++............. ...+.. ... . ........++++++.
T Consensus 204 --~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 281 (464)
T 3v7d_B 204 --STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN 281 (464)
T ss_dssp --SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETT
T ss_pred --CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCC
Confidence 77999999987788899999999999999998765433221111000 000000 000 0 000111234466666
Q ss_pred eeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCC
Q 015363 185 CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEI 263 (408)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~ 263 (408)
.+ ++++.|+.|++|| +.. ..+...+ .+|...|.+++|+|+++.+++| .|+.|++||+++
T Consensus 282 ~l------------~~~~~d~~i~vwd-~~~------~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 282 IV------------VSGSYDNTLIVWD-VAQ------MKCLYIL-SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp EE------------EEEETTSCEEEEE-TTT------TEEEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred EE------------EEEeCCCeEEEEE-CCC------CcEEEEe-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 66 9999999999999 432 3344444 7889999999999999999999 999999999984
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccce
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIAS 343 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 343 (408)
+..... +.+|...|.+++|+ + .+|++++.||.|++||++++... .... + ...
T Consensus 342 -~~~~~~-------~~~h~~~v~~~~~~--~-~~l~s~s~dg~v~vwd~~~~~~~----~~~~-~------------~~~ 393 (464)
T 3v7d_B 342 -GELMYT-------LQGHTALVGLLRLS--D-KFLVSAAADGSIRGWDANDYSRK----FSYH-H------------TNL 393 (464)
T ss_dssp -TEEEEE-------ECCCSSCEEEEEEC--S-SEEEEEETTSEEEEEETTTCCEE----EEEE-C------------TTC
T ss_pred -CcEEEE-------EeCCCCcEEEEEEc--C-CEEEEEeCCCcEEEEECCCCcee----eeec-C------------CCC
Confidence 444433 57899999999997 4 68999999999999999987532 1111 1 246
Q ss_pred eEEEEEccCCCEEEEeCCCeEEEEECCCCCCceee-eeecccccceEE
Q 015363 344 ISDIKFARNGRHILSRDYMTLKLWDINMDSGPVAT-FQVHEHLRPKVM 390 (408)
Q Consensus 344 i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~-~~~~~~~~~~~~ 390 (408)
+..++|+|++++|++|+|+.|++||+++ +++++. +..|......+.
T Consensus 394 ~~~~~~~~~~~~l~~~~dg~i~iwd~~~-g~~~~~~~~~~~~~v~~v~ 440 (464)
T 3v7d_B 394 SAITTFYVSDNILVSGSENQFNIYNLRS-GKLVHANILKDADQIWSVN 440 (464)
T ss_dssp CCEEEEEECSSEEEEEETTEEEEEETTT-CCEEESCTTTTCSEEEEEE
T ss_pred ccEEEEEeCCCEEEEecCCeEEEEECCC-CcEEehhhccCCCcEEEEE
Confidence 7788999999999999999999999998 688775 566655555554
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=243.86 Aligned_cols=286 Identities=13% Similarity=0.144 Sum_probs=204.2
Q ss_pred CcccceeeecccCcCcccceeeccceEEEEECCC---CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCc
Q 015363 13 QPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKS---GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPE 89 (408)
Q Consensus 13 ~~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~---~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~ 89 (408)
.-..|++.. ++........|.+.|++++|+|+ +++|++|+.||.|++||+.++..
T Consensus 45 ~v~iw~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------------------- 102 (357)
T 3i2n_A 45 VIQLYEIQH--GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM-------------------- 102 (357)
T ss_dssp EEEEEEECS--SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS--------------------
T ss_pred EEEEEeCCC--CcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc--------------------
Confidence 345576654 12122234579999999999998 69999999999999999887651
Q ss_pred cceeeeeccCCcccccccccccccceeEEEEee----cCCCcEEEEEeCCCeEEEEEcCCCc-EEEEeccCCCCcccCCC
Q 015363 90 FRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQ----SANSALYLLSTNDKTIKLWKVQEKK-VKKVFDWNVHPEKAAGN 164 (408)
Q Consensus 90 ~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p----~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~ 164 (408)
....+.+|. ..|.++.|.| ++++.+|++++.|+.|++||+.+++ ....+..+.... .
T Consensus 103 --~~~~~~~~~------------~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~----~ 164 (357)
T 3i2n_A 103 --PVYSVKGHK------------EIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN----K 164 (357)
T ss_dssp --CSEEECCCS------------SCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSC----C
T ss_pred --cEEEEEecc------------cceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCC----C
Confidence 235677888 7799997764 3568899999999999999999876 444444332210 1
Q ss_pred CCeEeecCCceeeE----EccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEE
Q 015363 165 GPIFGSHVSAIPKS----YMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSIS 240 (408)
Q Consensus 165 ~~v~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 240 (408)
..+. ++. |+|++..+ ++++.++.|++|| +.... .. . ...|...|.+++
T Consensus 165 ~~v~-------~~~~~~~~~~~~~~l------------~~~~~d~~i~i~d-~~~~~------~~-~-~~~~~~~v~~~~ 216 (357)
T 3i2n_A 165 RDCW-------TVAFGNAYNQEERVV------------CAGYDNGDIKLFD-LRNMA------LR-W-ETNIKNGVCSLE 216 (357)
T ss_dssp CCEE-------EEEEECCCC-CCCEE------------EEEETTSEEEEEE-TTTTE------EE-E-EEECSSCEEEEE
T ss_pred CceE-------EEEEEeccCCCCCEE------------EEEccCCeEEEEE-CccCc------ee-e-ecCCCCceEEEE
Confidence 1233 344 77899887 9999999999999 53322 11 1 256778999999
Q ss_pred eCC---CCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCc
Q 015363 241 NNS---DGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSA 316 (408)
Q Consensus 241 ~~~---~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 316 (408)
|+| ++.+|+++ .|+.|++||++..... ..+.. ..+.+|...|++++|+|++..+|++++.||.|++||++.+.
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPT-KGFAS--VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETT-TEEEE--EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcc-cceee--eccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 999 89999999 8999999999854322 21110 01347899999999999993389999999999999998764
Q ss_pred eeccccccccccc-----CCCCccccccccceeEEEEEccCCCEEE-EeC-CCeEEEEECCC
Q 015363 317 LCDTHSKLFEEQE-----APGTRSFFTEIIASISDIKFARNGRHIL-SRD-YMTLKLWDINM 371 (408)
Q Consensus 317 ~~~~~~~~~~~~~-----~~~~~~~~~~h~~~i~~~~~spdg~~l~-s~~-d~~v~~wd~~~ 371 (408)
.... ....+.. .......+.+|...|.+++|+|++++|+ +++ |+.|++||+.+
T Consensus 294 ~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 294 QRSK--KDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp CC----CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred cccc--ccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 3210 0000000 0011223456678999999999999988 675 79999999976
No 60
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.7e-33 Score=246.87 Aligned_cols=263 Identities=14% Similarity=0.194 Sum_probs=197.0
Q ss_pred eccceEEEEECCC----CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 34 EVDIISAIEFDKS----GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 34 h~~~V~~~~~s~~----~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
|...|++++|+|+ +++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-----------------------~~~~~~~~~--------- 115 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ-----------------------CIKHYVGHG--------- 115 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC-----------------------EEEEEESCC---------
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce-----------------------EeeeecCCC---------
Confidence 6688999999999 6799999999999999988664 345677888
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..|.+++|+|. ++.+|++++.|+.|++||+.+++....+...... .+.+. .+.|+|++..+
T Consensus 116 ---~~i~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~v~-------~~~~~~~~~~l--- 176 (366)
T 3k26_A 116 ---NAINELKFHPR-DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGH-----RDEVL-------SADYDLLGEKI--- 176 (366)
T ss_dssp ---SCEEEEEECSS-CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSC-----SSCEE-------EEEECTTSSEE---
T ss_pred ---CcEEEEEECCC-CCCEEEEEeCCCeEEEEEeecCeEEEEecccccc-----cCcee-------EEEECCCCCEE---
Confidence 77999999761 4779999999999999999998877766321110 23344 78999999987
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccc---------------------cceeeccccccceEEEEeCCCCCEE
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAG---------------------CRRIYAHAHDYHINSISNNSDGETF 248 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~v~~i~~~~~~~~l 248 (408)
++++.|+.|++|| +.......... +.......|...|.+++|+ +++|
T Consensus 177 ---------~~~~~dg~i~i~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l 244 (366)
T 3k26_A 177 ---------MSCGMDHSLKLWR-INSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLI 244 (366)
T ss_dssp ---------EEEETTSCEEEEE-SCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEE
T ss_pred ---------EEecCCCCEEEEE-CCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEE
Confidence 9999999999999 54322110000 0001113488999999998 7799
Q ss_pred EEe-cCCeEEEEeCCCCCceeeEeecC------CCcccCCcCCeEEEEEcCC--CCceEEEEeCCCeEEEEEcCCCceec
Q 015363 249 ISA-DDLRINLWNLEISNQSFNIVDVK------PANMEDLTEVITSAEFHPT--HCNMLAYSSSKGSIRLIDMRQSALCD 319 (408)
Q Consensus 249 ~~~-~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~ 319 (408)
+++ .|+.|++||++............ ...+..|...|++++|+|+ + ++|++|+.||.|++||+++++...
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTSCEEEEECCSSSGGG
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCCcEEEEECCCCCCcc
Confidence 998 89999999998554311100000 0125678888999999999 8 999999999999999999875432
Q ss_pred ccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECC
Q 015363 320 THSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~ 370 (408)
.....+.+|. |...|.+++|+|++++|++++ |+.|++||+.
T Consensus 324 ~~~~~~~~~~----------~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 324 AKCTTLTHHK----------CGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CEEEEECCTT----------CCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccceEEcccc----------cCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 2223444441 147899999999999999985 7999999985
No 61
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.6e-32 Score=260.95 Aligned_cols=256 Identities=13% Similarity=0.229 Sum_probs=190.2
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|...|++++|+|++++|++|+.||+|+|||+.++. ....+.+|.
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~-----------------------~~~~~~~h~---------- 472 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV-----------------------STRRFVGHT---------- 472 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----------------------EEEEEECCS----------
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc-----------------------ceeEEeCCC----------
Confidence 45799999999999999999999999999999988764 345678898
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCC--eeec
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG--CGER 188 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~l~~ 188 (408)
..|.+++|+|+ +.+|++++.|++|++||+.............. ....+. ++.|+|++. .+
T Consensus 473 --~~v~~~~~s~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~-----h~~~v~-------~~~~~~~~~~~~l-- 534 (694)
T 3dm0_A 473 --KDVLSVAFSLD--NRQIVSASRDRTIKLWNTLGECKYTISEGGEG-----HRDWVS-------CVRFSPNTLQPTI-- 534 (694)
T ss_dssp --SCEEEEEECTT--SSCEEEEETTSCEEEECTTSCEEEEECSSTTS-----CSSCEE-------EEEECSCSSSCEE--
T ss_pred --CCEEEEEEeCC--CCEEEEEeCCCEEEEEECCCCcceeeccCCCC-----CCCcEE-------EEEEeCCCCcceE--
Confidence 77999999755 88999999999999999876543333221111 022344 789999873 44
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCce
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~ 267 (408)
++++.|+.|++|| +.. ..+... +.+|...|++++|+|++++|+++ .|+.|++||+++.. .
T Consensus 535 ----------~s~s~d~~v~vwd-~~~------~~~~~~-~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~-~ 595 (694)
T 3dm0_A 535 ----------VSASWDKTVKVWN-LSN------CKLRST-LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK-K 595 (694)
T ss_dssp ----------EEEETTSCEEEEE-TTT------CCEEEE-ECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE-E
T ss_pred ----------EEEeCCCeEEEEE-CCC------CcEEEE-EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-e
Confidence 8999999999999 533 223334 37899999999999999999999 99999999999544 3
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCC-------Cccccccc
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPG-------TRSFFTEI 340 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~h 340 (408)
+.. +. +...+.+++|+|++ .+|++++ ++.|++||++++..+ ..+..+.... .......+
T Consensus 596 ~~~-------~~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (694)
T 3dm0_A 596 LYS-------LE-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLESKSIV----EDLKVDLKAEAEKADNSGPAATKRK 661 (694)
T ss_dssp EEC-------CB-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTTTEEE----EEECCCCC----------------C
T ss_pred EEE-------ec-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCCCCCh----hhhccccccccccccccccccCCce
Confidence 321 22 35679999999998 7776654 677999999988654 2222211000 00001122
Q ss_pred cceeEEEEEccCCCEEEEeC-CCeEEEEECC
Q 015363 341 IASISDIKFARNGRHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 341 ~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~ 370 (408)
...+.+++|+|||++|++|+ ||.|++|++.
T Consensus 662 ~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 662 VIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 23578999999999999995 7999999985
No 62
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.5e-32 Score=241.30 Aligned_cols=294 Identities=14% Similarity=0.162 Sum_probs=209.3
Q ss_pred eeccceEEEEECCC----CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 33 QEVDIISAIEFDKS----GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 33 ~h~~~V~~~~~s~~----~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
+|.++|++++|+|+ ..++++++.++.|+||++.++.. +..+..|..
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~-----------------------~~~~~~~~~------- 65 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGE-----------------------IRLLQSYVD------- 65 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGC-----------------------EEEEEEEEC-------
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcE-----------------------EEeeeeccc-------
Confidence 69999999999984 45666777777999999986642 122222110
Q ss_pred cccccceeEEEEeecCC--CcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCe
Q 015363 109 LEIEEKINKIRWCQSAN--SALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGC 185 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~ 185 (408)
..+...|.+++|+|+.+ +.+|++++.||.|++||+.+++....+..+. +.+. ++.|+| ++..
T Consensus 66 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--------~~i~-------~~~~~~~~~~~ 130 (366)
T 3k26_A 66 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG--------NAIN-------ELKFHPRDPNL 130 (366)
T ss_dssp SCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC--------SCEE-------EEEECSSCTTE
T ss_pred cCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC--------CcEE-------EEEECCCCCCE
Confidence 01126799999998744 6799999999999999999998877766543 2344 789999 8888
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceee--ccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCC
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIY--AHAHDYHINSISNNSDGETFISA-DDLRINLWNLE 262 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~ 262 (408)
+ ++++.|+.|++|| +... .....+ ...|...|.+++|+|++++|+++ .|+.|++||++
T Consensus 131 l------------~s~~~dg~i~iwd-~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 131 L------------LSVSKDHALRLWN-IQTD------TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp E------------EEEETTSCEEEEE-TTTT------EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred E------------EEEeCCCeEEEEE-eecC------eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence 7 9999999999999 5332 222221 15788999999999999999999 89999999998
Q ss_pred CCCceeeEeec---------------------CCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceeccc
Q 015363 263 ISNQSFNIVDV---------------------KPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTH 321 (408)
Q Consensus 263 ~~~~~~~~~~~---------------------~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 321 (408)
..... ..+.. .......|...|.+++|+ + .+|++++.|+.|++||++++....
T Consensus 192 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~-- 265 (366)
T 3k26_A 192 SKRMM-NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDI-- 265 (366)
T ss_dssp SHHHH-HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCG--
T ss_pred CCccc-cccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccc--
Confidence 43321 11000 000123488999999998 5 799999999999999998875321
Q ss_pred ccccccccC-CCCccccccccceeEEEEEccC--CCEEEEeC-CCeEEEEECCCCCCce----eeeeec--ccccceEEe
Q 015363 322 SKLFEEQEA-PGTRSFFTEIIASISDIKFARN--GRHILSRD-YMTLKLWDINMDSGPV----ATFQVH--EHLRPKVMH 391 (408)
Q Consensus 322 ~~~~~~~~~-~~~~~~~~~h~~~i~~~~~spd--g~~l~s~~-d~~v~~wd~~~~~~~~----~~~~~~--~~~~~~~~~ 391 (408)
..+..+.. ......+.+|...|.+++|+|+ +++|++|+ |+.|++||+.+ +++. ..+.+| ......+..
T Consensus 266 -~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~ 343 (366)
T 3k26_A 266 -DKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV-EDPHKAKCTTLTHHKCGAAIRQTSF 343 (366)
T ss_dssp -GGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS-SSGGGCEEEEECCTTCCSCEEEEEE
T ss_pred -cccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC-CCCccccceEEcccccCCceEEEEe
Confidence 11111110 1112334556788999999999 99999996 69999999987 4544 377777 455555554
Q ss_pred cCCCeee
Q 015363 392 SSKNYFM 398 (408)
Q Consensus 392 ~~~~~~~ 398 (408)
..++..+
T Consensus 344 s~~~~~l 350 (366)
T 3k26_A 344 SRDSSIL 350 (366)
T ss_dssp CTTSSEE
T ss_pred CCCCCeE
Confidence 4444433
No 63
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3e-31 Score=241.15 Aligned_cols=257 Identities=14% Similarity=0.191 Sum_probs=192.9
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|.+.|++|+|+|+|++||+|+.||.|+|||+.+++ .+..+.+|.
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~-----------------------~~~~~~~h~----------- 189 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-----------------------RLRNMTSHS----------- 189 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----------------------EEEEECCCS-----------
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc-----------------------EEEEEeCCC-----------
Confidence 3578899999999999999999999999999998765 356788888
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc-EEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK-VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.++.|. +.++++++.|+.+++||..... ....+..+.. .+. .+.+.|++..+
T Consensus 190 -~~v~~~s~~----~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~--------~~~-------~~~~~~~g~~l---- 245 (420)
T 4gga_A 190 -ARVGSLSWN----SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--------EVC-------GLRWAPDGRHL---- 245 (420)
T ss_dssp -SCEEEEEEE----TTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--------CEE-------EEEECTTSSEE----
T ss_pred -CceEEEeeC----CCEEEEEeCCCceeEeeecccceeeEEeccccc--------cee-------eeeecCCCCee----
Confidence 678888883 4599999999999999998654 3344444322 233 68899999988
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEE--e-cCCeEEEEeCCCCCc
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFIS--A-DDLRINLWNLEISNQ 266 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~--~-~d~~i~iwd~~~~~~ 266 (408)
++++.|+.+++|+ ....+.. ...... ...|...|.+++|+|.+. ++++ | .|++|++||+.+. .
T Consensus 246 --------~s~~~D~~v~i~~-~~~~~~~--~~~~~~-~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~-~ 312 (420)
T 4gga_A 246 --------ASGGNDNLVNVWP-SAPGEGG--WVPLQT-FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-A 312 (420)
T ss_dssp --------EEEETTSCEEEEE-SSCCSSC--SCCSEE-ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT-E
T ss_pred --------eeeeccccceEEe-ecccccc--ceeeee-ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-c
Confidence 9999999999999 4432211 112222 367888999999999764 5554 3 6999999999944 4
Q ss_pred eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe--CCCeEEEEEcCCCceecccccccccccCCCCcccccccccee
Q 015363 267 SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS--SKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI 344 (408)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 344 (408)
.... +. +...+.++.|+|++ ..+++++ .|+.|+|||+++++.+ ..+.+| .+.|
T Consensus 313 ~~~~-------~~-~~~~v~~~~~~~~~-~~lv~~sg~~d~~I~iwd~~~~~~v----~~l~gH------------~~~V 367 (420)
T 4gga_A 313 CLSA-------VD-AHSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMAKV----AELKGH------------TSRV 367 (420)
T ss_dssp EEEE-------EE-CSSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCCEE----EEECCC------------SSCE
T ss_pred ccee-------ec-cccceeeeeecCCC-CeEEEEEecCCCEEEEEECCCCcEE----EEEcCC------------CCCE
Confidence 4433 22 34568999999999 6666654 6899999999998654 666666 5789
Q ss_pred EEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccc
Q 015363 345 SDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 345 ~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
.+++|+|||++|+||+ |++|+|||+.. ..+.+..+.+...
T Consensus 368 ~~l~~spdg~~l~S~s~D~tvriWdv~~-~~~~~~~~~~~~~ 408 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADETLRLWRCFE-LDPARRREREKAS 408 (420)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCSC-SSCC---------
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECCC-CCccchhhhccCC
Confidence 9999999999999985 79999999986 4666665555443
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-31 Score=244.25 Aligned_cols=264 Identities=14% Similarity=0.174 Sum_probs=197.8
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|.+.|++++|+|++++|++|+.||.|++||+.+++. ...+.+|.
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-----------------------~~~~~~h~----------- 181 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN-----------------------PRTLIGHR----------- 181 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC-----------------------CEEEECCS-----------
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC-----------------------ceEEcCCC-----------
Confidence 47999999999999999999999999999999987653 35677888
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEee--------------cCCceee
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGS--------------HVSAIPK 177 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~--------------~~~~~~~ 177 (408)
..|.+++|+|+ +.+|++++.|++|++||+.+++....+..+... ...+... ......+
T Consensus 182 -~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 253 (420)
T 3vl1_A 182 -ATVTDIAIIDR--GRNVLSASLDGTIRLWECGTGTTIHTFNRKENP-----HDGVNSIALFVGTDRQLHEISTSKKNNL 253 (420)
T ss_dssp -SCEEEEEEETT--TTEEEEEETTSCEEEEETTTTEEEEEECBTTBT-----TCCEEEEEEEECCCSSCGGGCCCCCCTT
T ss_pred -CcEEEEEEcCC--CCEEEEEcCCCcEEEeECCCCceeEEeecCCCC-----CCCccEEEEecCCcceeeecccCcccce
Confidence 77999999765 789999999999999999999888777654322 1112110 0112246
Q ss_pred EEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCe
Q 015363 178 SYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLR 255 (408)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~ 255 (408)
+|+|+++.+ ++++.++.|++|| +.. ......+...|...|++++|+|++. +|+++ .|+.
T Consensus 254 ~~s~~~~~l------------~~~~~dg~i~i~d-~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 254 EFGTYGKYV------------IAGHVSGVITVHN-VFS------KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp CSSCTTEEE------------EEEETTSCEEEEE-TTT------CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred EEcCCCCEE------------EEEcCCCeEEEEE-CCC------CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 667777776 9999999999999 433 2223333356888999999999998 99998 8999
Q ss_pred EEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcc
Q 015363 256 INLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRS 335 (408)
Q Consensus 256 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 335 (408)
|++||+++.......+ ...|...+.++.+ |++ .+|++++.|+.|++||+...... ..+..+. ...
T Consensus 315 i~vwd~~~~~~~~~~~------~~~~~~~v~~~~~-~~~-~~l~s~~~d~~v~iw~~~~~~~~-~~~~~~~------~~~ 379 (420)
T 3vl1_A 315 LAQWDLRSPECPVGEF------LINEGTPINNVYF-AAG-ALFVSSGFDTSIKLDIISDPESE-RPAIEFE------TPT 379 (420)
T ss_dssp EEEEETTCTTSCSEEE------EESTTSCEEEEEE-ETT-EEEEEETTTEEEEEEEECCTTCC-SCEECTT------SCE
T ss_pred EEEEEcCCCcCchhhh------hccCCCCceEEEe-CCC-CEEEEecCCccEEEEeccCCCCC-ccceecc------Ccc
Confidence 9999999665544332 1236677888855 567 79999999999999999875321 0001111 111
Q ss_pred ccccccceeEEEEEccCCC----EEEEeCCCeEEEEECCC
Q 015363 336 FFTEIIASISDIKFARNGR----HILSRDYMTLKLWDINM 371 (408)
Q Consensus 336 ~~~~h~~~i~~~~~spdg~----~l~s~~d~~v~~wd~~~ 371 (408)
.+.+|...|.+++|+|++. ++++|+++.+.+|++.+
T Consensus 380 ~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 380 FLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 2445568899999999998 66667889999999964
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-31 Score=243.60 Aligned_cols=268 Identities=16% Similarity=0.191 Sum_probs=200.2
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
+.+++++|+|++++|++|+.||.|++||+.+.... ..+..|. .+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~-----------------------~~~~~~~-------------~~ 100 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGS-----------------------KMLKRAD-------------YT 100 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETT-----------------------TTSCSCC-------------EE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEeccccee-----------------------eEEecCC-------------ce
Confidence 44568999999999999999999999998766431 1233332 23
Q ss_pred eEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccC
Q 015363 116 NKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASN 195 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 195 (408)
....|+ +++.+|++++.|+.|++||+.+++....+..+. +.+. +++|+|+++.+
T Consensus 101 ~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~--------~~v~-------~~~~~~~~~~l--------- 154 (420)
T 3vl1_A 101 AVDTAK--LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV--------SEIT-------KLKFFPSGEAL--------- 154 (420)
T ss_dssp EEEEEC--SSSCEEEEEETTSCEEEECTTSCEEEEETTSSS--------SCEE-------EEEECTTSSEE---------
T ss_pred EEEEEe--cCCCEEEEEECCCCEEEEeCCCcceeeeccccc--------CccE-------EEEECCCCCEE---------
Confidence 344564 458899999999999999999888776654442 3354 78999999987
Q ss_pred ccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecC
Q 015363 196 DSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVK 274 (408)
Q Consensus 196 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~ 274 (408)
++++.|+.|++|| +.. .++...+ .+|...|.+++|+|++++|+++ .|+.|++||+++. +....+..
T Consensus 155 ---~s~s~d~~i~iwd-~~~------~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~- 221 (420)
T 3vl1_A 155 ---ISSSQDMQLKIWS-VKD------GSNPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG-TTIHTFNR- 221 (420)
T ss_dssp ---EEEETTSEEEEEE-TTT------CCCCEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT-EEEEEECB-
T ss_pred ---EEEeCCCeEEEEe-CCC------CcCceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC-ceeEEeec-
Confidence 9999999999999 533 2333443 7899999999999999999999 8999999999944 44443221
Q ss_pred CCcccCCc---------------------CCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCC
Q 015363 275 PANMEDLT---------------------EVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGT 333 (408)
Q Consensus 275 ~~~~~~~~---------------------~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 333 (408)
...+. ..+.+++|+|++ .+|++|+.||.|++||+++++.. ..+.
T Consensus 222 ---~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~----~~~~------- 286 (420)
T 3vl1_A 222 ---KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQT----IQLP------- 286 (420)
T ss_dssp ---TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEE----EEEC-------
T ss_pred ---CCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCcee----EEcc-------
Confidence 11233 444555668899 89999999999999999988644 2222
Q ss_pred ccccccccceeEEEEEccCCC-EEEEeC-CCeEEEEECCCCCCceeeeeec-ccccceEEecCCCeee
Q 015363 334 RSFFTEIIASISDIKFARNGR-HILSRD-YMTLKLWDINMDSGPVATFQVH-EHLRPKVMHSSKNYFM 398 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg~-~l~s~~-d~~v~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 398 (408)
.+|...|.+++|+|++. +|++|+ |+.|++||+++...++..+.+| ......+... ++..+
T Consensus 287 ----~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l 349 (420)
T 3vl1_A 287 ----SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALF 349 (420)
T ss_dssp ----CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEE
T ss_pred ----cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEE
Confidence 12357899999999998 999885 6999999999855668888884 4445555443 44433
No 66
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.4e-32 Score=239.35 Aligned_cols=287 Identities=11% Similarity=0.072 Sum_probs=206.5
Q ss_pred eeeccceEEEEECCCCC-eEEEeec---CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccc
Q 015363 32 VQEVDIISAIEFDKSGD-HLATGDR---GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLK 107 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~-~l~sg~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~ 107 (408)
.+|.+.|++++|+|++. ++++|+. ||.|+||++.+++.. .....+|.
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~----------------------~~~~~~~~------- 65 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK----------------------LLREIEKA------- 65 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEE----------------------EEEEEEES-------
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccc----------------------ceeeeccc-------
Confidence 46999999999999986 5566766 999999999876531 11122555
Q ss_pred ccccccceeEEEEeecC-CCcEEEEEeCCCeEEEEEcCCCc-EEEEeccCCCCcccCCCCCeEeecCCceee------EE
Q 015363 108 SLEIEEKINKIRWCQSA-NSALYLLSTNDKTIKLWKVQEKK-VKKVFDWNVHPEKAAGNGPIFGSHVSAIPK------SY 179 (408)
Q Consensus 108 ~~~~~~~v~~v~~~p~~-~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~ 179 (408)
..|.+++|+|+. ++.+|++++.|+.|++||+.+++ ....+..+.. .+. ++ +|
T Consensus 66 -----~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--------~v~-------~~~~~~~~~~ 125 (357)
T 3i2n_A 66 -----KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKE--------IIN-------AIDGIGGLGI 125 (357)
T ss_dssp -----SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSS--------CEE-------EEEEESGGGC
T ss_pred -----CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEeccc--------ceE-------EEeecccccc
Confidence 779999997652 25799999999999999999876 5555554432 233 34 45
Q ss_pred ccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeecccc----ccceEEEE----eCCCCCEEEEe
Q 015363 180 MANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAH----DYHINSIS----NNSDGETFISA 251 (408)
Q Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~----~~~~~~~l~~~ 251 (408)
+|++..+ ++++.|+.|++|| +..... +...+ ..| ...+.+++ |+|++++|+++
T Consensus 126 s~~~~~l------------~~~~~d~~i~vwd-~~~~~~-----~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 186 (357)
T 3i2n_A 126 GEGAPEI------------VTGSRDGTVKVWD-PRQKDD-----PVANM-EPVQGENKRDCWTVAFGNAYNQEERVVCAG 186 (357)
T ss_dssp C-CCCEE------------EEEETTSCEEEEC-TTSCSS-----CSEEE-CCCTTSCCCCEEEEEEECCCC-CCCEEEEE
T ss_pred CCCccEE------------EEEeCCCeEEEEe-CCCCCC-----cceec-cccCCCCCCceEEEEEEeccCCCCCEEEEE
Confidence 7888887 9999999999999 543221 12222 222 33788888 78999999999
Q ss_pred -cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcC---CCCceEEEEeCCCeEEEEEcCCCceeccccccccc
Q 015363 252 -DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHP---THCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEE 327 (408)
Q Consensus 252 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 327 (408)
.|+.|++||++... ... ...|...|.+++|+| ++ .+|++++.|+.|++||++++... ..+..
T Consensus 187 ~~d~~i~i~d~~~~~-~~~--------~~~~~~~v~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~----~~~~~ 252 (357)
T 3i2n_A 187 YDNGDIKLFDLRNMA-LRW--------ETNIKNGVCSLEFDRKDISM-NKLVATSLEGKFHVFDMRTQHPT----KGFAS 252 (357)
T ss_dssp ETTSEEEEEETTTTE-EEE--------EEECSSCEEEEEESCSSSSC-CEEEEEESTTEEEEEEEEEEETT----TEEEE
T ss_pred ccCCeEEEEECccCc-eee--------ecCCCCceEEEEcCCCCCCC-CEEEEECCCCeEEEEeCcCCCcc----cceee
Confidence 89999999999543 322 345788899999999 88 89999999999999999876432 23221
Q ss_pred ccCCCCccccccccceeEEEEEccCCC-EEEEeC-CCeEEEEECCCCC------------------Cceeeeeecccccc
Q 015363 328 QEAPGTRSFFTEIIASISDIKFARNGR-HILSRD-YMTLKLWDINMDS------------------GPVATFQVHEHLRP 387 (408)
Q Consensus 328 ~~~~~~~~~~~~h~~~i~~~~~spdg~-~l~s~~-d~~v~~wd~~~~~------------------~~~~~~~~~~~~~~ 387 (408)
. .+.+|...|.+++|+|+++ +|++++ |+.|++||+++.. +++..+.+|.....
T Consensus 253 ~-------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 253 V-------SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp E-------EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred e-------ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 0 0224468899999999998 788885 7999999998632 35777888888776
Q ss_pred eEEecCCCeeee--e--eceeeec
Q 015363 388 KVMHSSKNYFMG--L--DNIHTLY 407 (408)
Q Consensus 388 ~~~~~~~~~~~~--~--d~~~~~~ 407 (408)
.+....++..++ . |...++|
T Consensus 326 ~~~~s~~~~~l~~s~~~d~~i~iw 349 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQTVRVL 349 (357)
T ss_dssp EEEECSSSTTEEEEEETTSEEEEE
T ss_pred EEEEcCCCCeEEEEecCCCcEEEE
Confidence 666555555443 2 4444444
No 67
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.9e-31 Score=239.74 Aligned_cols=275 Identities=15% Similarity=0.229 Sum_probs=209.8
Q ss_pred eEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeE
Q 015363 38 ISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK 117 (408)
Q Consensus 38 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~ 117 (408)
++.|+||++ ++||+|. |++|+|||..+++.. ....+.+|. ..|++
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~---------------------~~~~~~~~~------------~~V~s 152 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDIL---------------------QLLQMEQPG------------EYISS 152 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEE---------------------EEEECCSTT------------CCEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEE---------------------EEEEecCCC------------CcEEE
Confidence 578999975 5788875 899999999887531 122344565 67999
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCcc
Q 015363 118 IRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDS 197 (408)
Q Consensus 118 v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 197 (408)
|+|+| +|.+|++|+.|++|++||+.+++.......+... + .+++.++..+
T Consensus 153 v~fsp--dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~--------v---------~~~s~~~~~l----------- 202 (420)
T 4gga_A 153 VAWIK--EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR--------V---------GSLSWNSYIL----------- 202 (420)
T ss_dssp EEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC--------E---------EEEEEETTEE-----------
T ss_pred EEECC--CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCc--------e---------EEEeeCCCEE-----------
Confidence 99975 4889999999999999999999988877765432 2 3445566766
Q ss_pred ccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCC
Q 015363 198 SFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPA 276 (408)
Q Consensus 198 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~ 276 (408)
++++.++.+++|+ ..... ..... +.+|...+..+.++|++++++++ .|+.+++|+..........+ .
T Consensus 203 -~sgs~d~~i~~~d-~~~~~-----~~~~~-~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~----~ 270 (420)
T 4gga_A 203 -SSGSRSGHIHHHD-VRVAE-----HHVAT-LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPL----Q 270 (420)
T ss_dssp -EEEETTSEEEEEE-TTSSS-----CEEEE-EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCS----E
T ss_pred -EEEeCCCceeEee-ecccc-----eeeEE-ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceee----e
Confidence 9999999999999 43211 12223 37899999999999999999999 99999999998544322111 1
Q ss_pred cccCCcCCeEEEEEcCCCCceEEEE--eCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 277 NMEDLTEVITSAEFHPTHCNMLAYS--SSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 277 ~~~~~~~~v~~~~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
....|...|.+++|+|.+..+++++ +.|+.|++||++++... ..+..+ ..+.++.|+|+++
T Consensus 271 ~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~----~~~~~~-------------~~v~~~~~~~~~~ 333 (420)
T 4gga_A 271 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL----SAVDAH-------------SQVCSILWSPHYK 333 (420)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE----EEEECS-------------SCEEEEEEETTTT
T ss_pred eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc----eeeccc-------------cceeeeeecCCCC
Confidence 2467889999999999986777765 46999999999998654 444444 5689999999999
Q ss_pred EEEEe---CCCeEEEEECCCCCCceeeeeecccccceEEecCCCeeee---eeceeeec
Q 015363 355 HILSR---DYMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMG---LDNIHTLY 407 (408)
Q Consensus 355 ~l~s~---~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~~~~ 407 (408)
.|+++ .|+.|++||+.+ ++++.++.+|......+....++..++ .|...+||
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~-~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriW 391 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 391 (420)
T ss_dssp EEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred eEEEEEecCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 88875 369999999998 799999999999877777555555442 35555554
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=242.97 Aligned_cols=285 Identities=14% Similarity=0.174 Sum_probs=203.2
Q ss_pred cceeeccceEEEEECCCCC-eEEEeecCCeEEEEEe----CCCCCCCCcccccccccccccCCCccceeeeeccCCcccc
Q 015363 30 EEVQEVDIISAIEFDKSGD-HLATGDRGGRVVLFER----TDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFD 104 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~~-~l~sg~~dg~i~iw~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~ 104 (408)
....|.+.|++++|+|+++ +||+|+.||.|+||++ .++..... + .+...+...+.+|.
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~---------~~~~~~~~~~~~~~---- 102 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWK----L---------TIIAELRHPFALSA---- 102 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEE----E---------EEEEEEECCCCCC-----
T ss_pred eeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccc----c---------cccccccccccccc----
Confidence 4456779999999999999 9999999999999999 66541000 0 00000111122210
Q ss_pred cccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCC
Q 015363 105 YLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG 184 (408)
Q Consensus 105 ~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 184 (408)
....+...|++++|+| ++.+|++++.|+.|++|| .+++....+..+. +.+. .+.|+|+++
T Consensus 103 --~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~--------~~v~-------~~~~~~~~~ 162 (425)
T 1r5m_A 103 --SSGKTTNQVTCLAWSH--DGNSIVTGVENGELRLWN-KTGALLNVLNFHR--------APIV-------SVKWNKDGT 162 (425)
T ss_dssp -------CBCEEEEEECT--TSSEEEEEETTSCEEEEE-TTSCEEEEECCCC--------SCEE-------EEEECTTSS
T ss_pred --cccCCCCceEEEEEcC--CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCC--------ccEE-------EEEECCCCC
Confidence 0001126799999975 488999999999999999 5555555555432 2344 789999999
Q ss_pred eeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccc---------------eEEEEeCCCCCEEE
Q 015363 185 CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYH---------------INSISNNSDGETFI 249 (408)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------v~~i~~~~~~~~l~ 249 (408)
.+ ++++.++.|++|+ +... .....+ ..+... +.+++|+|++. ++
T Consensus 163 ~l------------~~~~~d~~i~iwd-~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 221 (425)
T 1r5m_A 163 HI------------ISMDVENVTILWN-VISG------TVMQHF-ELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FV 221 (425)
T ss_dssp EE------------EEEETTCCEEEEE-TTTT------EEEEEE-CCC---------------CCCBSCCEEEETTE-EE
T ss_pred EE------------EEEecCCeEEEEE-CCCC------cEEEEe-eccccCccceeeccccCCcceeeEEEEcCCCE-EE
Confidence 87 8999999999999 5332 222222 333333 88899999865 55
Q ss_pred Ee-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccc
Q 015363 250 SA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQ 328 (408)
Q Consensus 250 ~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 328 (408)
++ .++.|++||++... .... +..|...|.+++|+|++ .+|++++.|+.|++||+++++.. ..+..|
T Consensus 222 ~~~~~g~i~~~d~~~~~-~~~~-------~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~ 288 (425)
T 1r5m_A 222 IPGPKGAIFVYQITEKT-PTGK-------LIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQ----NCFYGH 288 (425)
T ss_dssp EECGGGCEEEEETTCSS-CSEE-------ECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCS----EEECCC
T ss_pred EEcCCCeEEEEEcCCCc-eeee-------eccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccc----eEecCC
Confidence 66 89999999999543 3332 46788999999999999 89999999999999999987543 444444
Q ss_pred cCCCCccccccccceeEEEEEccCCCEEEEe-CCCeEEEEECCCCCCceeeeeecccccceEEecCCCeeee
Q 015363 329 EAPGTRSFFTEIIASISDIKFARNGRHILSR-DYMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMG 399 (408)
Q Consensus 329 ~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (408)
...|.+++|+|++ +|+++ .|+.|++||+++ ++++..+..|......+....++..++
T Consensus 289 ------------~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 289 ------------SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQKYA 346 (425)
T ss_dssp ------------SSCEEEEEEETTT-EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSSEEE
T ss_pred ------------CccEEEEEECCCC-EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCCEEE
Confidence 4789999999999 77777 479999999997 789999999887766665544455443
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-31 Score=240.10 Aligned_cols=248 Identities=13% Similarity=0.189 Sum_probs=190.9
Q ss_pred eeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
.|.+.|++++|+|++++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~-----------------------~~~~~~~~~------------ 176 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT-----------------------KLRTMAGHQ------------ 176 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----------------------EEEEECCCS------------
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe-----------------------EEEEecCCC------------
Confidence 378899999999999999999999999999987665 345677888
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCC-CcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQE-KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
..|.+++|. +.++++++.|+.|++||++. ......+..+. +.+. .+.|+|++..+
T Consensus 177 ~~v~~~~~~----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------~~v~-------~~~~~~~~~~l----- 232 (401)
T 4aez_A 177 ARVGCLSWN----RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHS--------SEVC-------GLAWRSDGLQL----- 232 (401)
T ss_dssp SCEEEEEEE----TTEEEEEETTSEEEEEETTSSSCEEEEEECCS--------SCEE-------EEEECTTSSEE-----
T ss_pred CceEEEEEC----CCEEEEEcCCCCEEEEecccCcceeeEEcCCC--------CCee-------EEEEcCCCCEE-----
Confidence 779999993 45999999999999999984 44455544432 2344 78999999988
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe---cCCeEEEEeCCCCCce
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA---DDLRINLWNLEISNQS 267 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~---~d~~i~iwd~~~~~~~ 267 (408)
++++.|+.|++|| +.. ..+...+ ..|...|.+++|+|++. +++++ .|+.|++||+++. ..
T Consensus 233 -------~s~~~d~~v~iwd-~~~------~~~~~~~-~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-~~ 296 (401)
T 4aez_A 233 -------ASGGNDNVVQIWD-ARS------SIPKFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-AR 296 (401)
T ss_dssp -------EEEETTSCEEEEE-TTC------SSEEEEE-CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-CE
T ss_pred -------EEEeCCCeEEEcc-CCC------CCccEEe-cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-CE
Confidence 9999999999999 433 2333333 67889999999999774 55554 4999999999954 44
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEE--eCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYS--SSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
... + .+...+.+++|+|++ .+++++ +.|+.|++||+.++... ....+.+| ...|.
T Consensus 297 ~~~-------~-~~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~--~~~~~~~h------------~~~v~ 353 (401)
T 4aez_A 297 VNT-------V-DAGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLT--KQVDIPAH------------DTRVL 353 (401)
T ss_dssp EEE-------E-ECSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEE--EEEEEECC------------SSCCC
T ss_pred EEE-------E-eCCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccce--eEEEecCC------------CCCEE
Confidence 433 2 246779999999999 888884 48999999999986442 11223344 57899
Q ss_pred EEEEccCCCEEEEeC-CCeEEEEECCCCCCceeee
Q 015363 346 DIKFARNGRHILSRD-YMTLKLWDINMDSGPVATF 379 (408)
Q Consensus 346 ~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~ 379 (408)
+++|+|+|++|++++ |+.|++||+.+ ++.++..
T Consensus 354 ~~~~s~dg~~l~s~~~dg~i~iw~~~~-~~~~~~~ 387 (401)
T 4aez_A 354 YSALSPDGRILSTAASDENLKFWRVYD-GDHVKRP 387 (401)
T ss_dssp EEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCC-Ccccccc
Confidence 999999999999985 79999999997 5655544
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.8e-32 Score=241.01 Aligned_cols=266 Identities=8% Similarity=0.067 Sum_probs=197.5
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|...|++++|+|++++|++|+.||.|++||+.+++.. ....+..|.
T Consensus 48 ~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---------------------~~~~~~~~~---------- 96 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK---------------------PTLVILRIN---------- 96 (372)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE---------------------EEEECCCCS----------
T ss_pred ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeee---------------------eeEEeecCC----------
Confidence 3469999999999999999999999999999999766421 122345566
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE---EEEe-ccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV---KKVF-DWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
..|.+++|+|+ +.+|++++.|+.|++||+..+.. .... ..+ ...+. ++.|+|++..+
T Consensus 97 --~~v~~~~~~~~--~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~--------~~~i~-------~~~~~~~~~~l 157 (372)
T 1k8k_C 97 --RAARCVRWAPN--EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI--------RSTVL-------SLDWHPNSVLL 157 (372)
T ss_dssp --SCEEEEEECTT--SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC--------CSCEE-------EEEECTTSSEE
T ss_pred --CceeEEEECCC--CCEEEEEeCCCEEEEEEecCCCcceeeeeeeccc--------CCCee-------EEEEcCCCCEE
Confidence 77999999754 88999999999999999988762 1221 111 22344 78999999987
Q ss_pred ecccccccCccccCCCCCceeeeceeeecccc------------ccccccceeeccccccceEEEEeCCCCCEEEEe-cC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQET------------NLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DD 253 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 253 (408)
++++.++.|++|| +..... .....+...+ ..|...|.+++|+|++++|+++ .|
T Consensus 158 ------------~~~~~dg~i~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 223 (372)
T 1k8k_C 158 ------------AAGSCDFKCRIFS-AYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHD 223 (372)
T ss_dssp ------------EEEETTSCEEEEE-CCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETT
T ss_pred ------------EEEcCCCCEEEEE-cccccccccccccccccccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCC
Confidence 9999999999999 532111 1123344443 6888999999999999999999 99
Q ss_pred CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCC--Cceecccccccccc---
Q 015363 254 LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQ--SALCDTHSKLFEEQ--- 328 (408)
Q Consensus 254 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~--- 328 (408)
+.|++||+++.. .... +..|...|.+++|+|++ .+|++| .|+.|++|+++. +... .+..+..+
T Consensus 224 ~~i~i~d~~~~~-~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~~~~~~~--~~~~~~~~~~~ 291 (372)
T 1k8k_C 224 STVCLADADKKM-AVAT-------LASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDSAAGKLS--FGGRLDVPKQS 291 (372)
T ss_dssp TEEEEEEGGGTT-EEEE-------EECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEETTTTEEE--ECCCCCCC---
T ss_pred CEEEEEECCCCc-eeEE-------EccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccCcCceEE--EeeccCccccc
Confidence 999999999554 4333 46688899999999999 888877 899999999988 4210 00111100
Q ss_pred --------------c-CCCC-------ccccccccceeEEEEEc-cCC---CEEEEeC-CCeEEEEECCCC
Q 015363 329 --------------E-APGT-------RSFFTEIIASISDIKFA-RNG---RHILSRD-YMTLKLWDINMD 372 (408)
Q Consensus 329 --------------~-~~~~-------~~~~~~h~~~i~~~~~s-pdg---~~l~s~~-d~~v~~wd~~~~ 372 (408)
. .... .....+|...|.+++|+ ++| .+|++|+ ||.|++||+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 292 SQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp -----CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred hhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 0 0000 22235888999999977 566 8999985 799999999763
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1e-31 Score=242.49 Aligned_cols=275 Identities=11% Similarity=0.125 Sum_probs=197.9
Q ss_pred cceeeccceEEEEECCC----C---CeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcc
Q 015363 30 EEVQEVDIISAIEFDKS----G---DHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPE 102 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~----~---~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~ 102 (408)
....|...|++++|+|+ + ++|++|+.||.|++|++.++... .......+..|...
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~------------------~~~~~~~~~~~~~~ 118 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET------------------KKVIFEKLDLLDSD 118 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT------------------CCEEEEEECCSCTT
T ss_pred EEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccc------------------ccccceeecccccc
Confidence 34579999999999999 9 99999999999999999876521 11113456666200
Q ss_pred cccccccccccceeEEEEeec--CCCcE-EEEEeCCCeEEEEEcCC------CcEEE-----EeccCCCCcccCCCCCeE
Q 015363 103 FDYLKSLEIEEKINKIRWCQS--ANSAL-YLLSTNDKTIKLWKVQE------KKVKK-----VFDWNVHPEKAAGNGPIF 168 (408)
Q Consensus 103 ~~~~~~~~~~~~v~~v~~~p~--~~~~~-l~~~~~d~~i~vwd~~~------~~~~~-----~~~~~~~~~~~~~~~~v~ 168 (408)
. ....|.+++|++. +++.+ |++++.|+.|++||+.+ ++... .+..... ........+.
T Consensus 119 ~-------~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~ 190 (397)
T 1sq9_A 119 M-------KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE-SPMTPSQFAT 190 (397)
T ss_dssp G-------GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEEC-CSSSSCCCCC
T ss_pred c-------CCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeec-cccCCCCCce
Confidence 0 0167999999822 34778 99999999999999987 44332 2211000 0000022233
Q ss_pred eecCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccc---c---ccceEEEEeC
Q 015363 169 GSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHA---H---DYHINSISNN 242 (408)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~i~~~ 242 (408)
++.|+|++ .+ ++++.++.|++|| +.. ..+...+ .. | ...|.+++|+
T Consensus 191 -------~~~~~~~~-~l------------~~~~~dg~i~i~d-~~~------~~~~~~~-~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 191 -------SVDISERG-LI------------ATGFNNGTVQISE-LST------LRPLYNF-ESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp -------EEEECTTS-EE------------EEECTTSEEEEEE-TTT------TEEEEEE-ECCC---CCCCCEEEEEEC
T ss_pred -------EEEECCCc-eE------------EEEeCCCcEEEEE-CCC------CceeEEE-eccccccccCCccceEEEC
Confidence 78999999 76 9999999999999 433 2333333 55 7 8899999999
Q ss_pred CCCCEEEEe-cC---CeEEEEeCCCCCceeeEeecCCCcccC-------------CcCCeEEEEEcCCCCceEEEEeCCC
Q 015363 243 SDGETFISA-DD---LRINLWNLEISNQSFNIVDVKPANMED-------------LTEVITSAEFHPTHCNMLAYSSSKG 305 (408)
Q Consensus 243 ~~~~~l~~~-~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~p~~~~~l~s~~~dg 305 (408)
|++++|+++ .| +.|++||+++.. .... +.. |...|.+++|+|++ .+|++++.|+
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg 313 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGE-RIGS-------LSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETLCSAGWDG 313 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCC-EEEE-------ECBC--------CCBSBSSCEEEEEECSSS-SEEEEEETTS
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCc-ccce-------eccCcccccccccccccCCcEEEEEECCCC-CEEEEEeCCC
Confidence 999999999 88 999999999544 3333 344 88999999999999 9999999999
Q ss_pred eEEEEEcCCCceecccccccc------ccc---CCCCccccccccceeEEEEEccCC----------CEEEEeC-CCeEE
Q 015363 306 SIRLIDMRQSALCDTHSKLFE------EQE---APGTRSFFTEIIASISDIKFARNG----------RHILSRD-YMTLK 365 (408)
Q Consensus 306 ~i~iwd~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~h~~~i~~~~~spdg----------~~l~s~~-d~~v~ 365 (408)
.|++||+++++.. ..+. +|. ..........|...|.+++|+|++ ++|++++ |+.|+
T Consensus 314 ~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 314 KLRFWDVKTKERI----TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp EEEEEETTTTEEE----EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred eEEEEEcCCCcee----EEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEE
Confidence 9999999988654 4444 330 001111223347899999999998 7899885 79999
Q ss_pred EEECCC
Q 015363 366 LWDINM 371 (408)
Q Consensus 366 ~wd~~~ 371 (408)
+||+++
T Consensus 390 iw~~~~ 395 (397)
T 1sq9_A 390 WFREAG 395 (397)
T ss_dssp EEEEEC
T ss_pred EEEcCC
Confidence 999986
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-33 Score=255.15 Aligned_cols=258 Identities=10% Similarity=0.055 Sum_probs=181.7
Q ss_pred ceeeccceEEEEECCCC---------CeEEE-------------------eecCCeEEEEEeCCCCCCCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSG---------DHLAT-------------------GDRGGRVVLFERTDTRDNGGQRRDLEMMDY 82 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~---------~~l~s-------------------g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 82 (408)
...+.+.|.+|+|+|++ ++||+ |+.|++|+||++.+++..
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~------------ 196 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLH------------ 196 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCC------------
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCC------------
Confidence 34567788888888876 56666 557889999998776431
Q ss_pred cccCCCccceeeeeccCCcccccccccccccceeEEEEeec----CCCcEEEEEeCCCeEEEEEcCCCcEE--EEeccCC
Q 015363 83 SMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQS----ANSALYLLSTNDKTIKLWKVQEKKVK--KVFDWNV 156 (408)
Q Consensus 83 ~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~----~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~ 156 (408)
......+.+|. +.|.+++|+|. +++.+||+++.||+|++||+.++... .......
T Consensus 197 -------~~~~~~l~~~~------------~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~ 257 (524)
T 2j04_B 197 -------CVKVQTIVHSF------------GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEK 257 (524)
T ss_dssp -------EEEEEEEEECC------------CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCS
T ss_pred -------ceEEEEEEecC------------CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecC
Confidence 11123355666 66999999986 34679999999999999999866421 0000000
Q ss_pred CC-cccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccc
Q 015363 157 HP-EKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYH 235 (408)
Q Consensus 157 ~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (408)
.. ......+.+. +++|++++ .+ ++|+.|++|++|| +.... .+... +.+|...
T Consensus 258 p~~~l~~h~~~v~-------sv~~s~~~-~l------------asgs~DgtV~lWD-~~~~~-----~~~~~-~~~H~~~ 310 (524)
T 2j04_B 258 PSLTLSLADSLIT-------TFDFLSPT-TV------------VCGFKNGFVAEFD-LTDPE-----VPSFY-DQVHDSY 310 (524)
T ss_dssp CSEEECCTTTCEE-------EEEESSSS-EE------------EEEETTSEEEEEE-TTBCS-----SCSEE-EECSSSC
T ss_pred ceEEEEcCCCCEE-------EEEecCCC-eE------------EEEeCCCEEEEEE-CCCCC-----CceEE-eeccccc
Confidence 00 0001123344 78888764 55 9999999999999 54321 12222 3789999
Q ss_pred eEEE--EeCCCC-CEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCc--CCeEEEEEcCCCCceEEEEeCCCeEEE
Q 015363 236 INSI--SNNSDG-ETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLT--EVITSAEFHPTHCNMLAYSSSKGSIRL 309 (408)
Q Consensus 236 v~~i--~~~~~~-~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~s~~~dg~i~i 309 (408)
|+++ +|+|++ .+||++ .|++|+|||+++.... .. +.+|. ..|.+++|+|++ +.|++++.|++|++
T Consensus 311 V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~-~~-------~~~~~~~~~v~~v~fsp~~-~~l~s~~~d~tv~l 381 (524)
T 2j04_B 311 ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT-KT-------TVSRFRGSNLVPVVYCPQI-YSYIYSDGASSLRA 381 (524)
T ss_dssp EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH-CE-------EEEECSCCSCCCEEEETTT-TEEEEECSSSEEEE
T ss_pred EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc-cc-------cccccccCcccceEeCCCc-CeEEEeCCCCcEEE
Confidence 9999 678887 899999 9999999999844332 22 23343 247889999999 88999999999999
Q ss_pred EEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 310 IDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 310 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
||++++... ..+.+| .+.|.+++|+|+|++|++|+ |++|++||+..
T Consensus 382 wd~~~~~~~----~~l~gH------------~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 382 VPSRAAFAV----HPLVSR------------ETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EETTCTTCC----EEEEEC------------SSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred EECcccccc----eeeecC------------CCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 999987543 444555 57899999999999999985 79999999864
No 73
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-31 Score=248.39 Aligned_cols=269 Identities=8% Similarity=0.000 Sum_probs=187.4
Q ss_pred eeeccceEEEEECCC------CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccc
Q 015363 32 VQEVDIISAIEFDKS------GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDY 105 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~------~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~ 105 (408)
..|.+.|.+++|+|+ +.+||+|+.||+|+|||+.++..... ... . .......+.+|.
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~--~~~---------~-~~~p~~~l~~h~----- 266 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH--VFK---------M-CEKPSLTLSLAD----- 266 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS--EEE---------C-CCSCSEEECCTT-----
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc--cce---------e-ecCceEEEEcCC-----
Confidence 346789999999997 57999999999999999976542100 000 0 001223567777
Q ss_pred ccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc-EEEEeccCCCCcccCCCCCeEeecCCceee--EEccC
Q 015363 106 LKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK-VKKVFDWNVHPEKAAGNGPIFGSHVSAIPK--SYMAN 182 (408)
Q Consensus 106 ~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~ 182 (408)
..|++++|+|. ..|++|+.||+|++||++++. ....+..+. +.|. ++ .++|+
T Consensus 267 -------~~v~sv~~s~~---~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~--------~~V~-------sv~~~~s~~ 321 (524)
T 2j04_B 267 -------SLITTFDFLSP---TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHD--------SYIL-------SVSTAYSDF 321 (524)
T ss_dssp -------TCEEEEEESSS---SEEEEEETTSEEEEEETTBCSSCSEEEECSS--------SCEE-------EEEEECCTT
T ss_pred -------CCEEEEEecCC---CeEEEEeCCCEEEEEECCCCCCceEEeeccc--------ccEE-------EEEEEcCCC
Confidence 77999999753 389999999999999998763 233333332 2344 45 56788
Q ss_pred C-CeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccc--cceEEEEeCCCCCEEEEe-cCCeEEE
Q 015363 183 G-GCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHD--YHINSISNNSDGETFISA-DDLRINL 258 (408)
Q Consensus 183 ~-~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~i~~~~~~~~l~~~-~d~~i~i 258 (408)
+ ..+ ++++.|++|++|| +.. ..+...+ .+|. ..|.+++|+|++..|+++ .|++|++
T Consensus 322 g~~~l------------aS~S~D~tvklWD-~~~------~~~~~~~-~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 322 EDTVV------------STVAVDGYFYIFN-PKD------IATTKTT-VSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp SCCEE------------EEEETTSEEEEEC-GGG------HHHHCEE-EEECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred CCeEE------------EEeccCCeEEEEE-CCC------CCccccc-ccccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 7 666 9999999999999 543 2222222 3443 247899999999999998 8999999
Q ss_pred EeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceec-c---------cccccccc
Q 015363 259 WNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCD-T---------HSKLFEEQ 328 (408)
Q Consensus 259 wd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~---------~~~~~~~~ 328 (408)
||++... +... +.+|...|++++|+|++ .+|++|+.|++|++||+....... + .+..+.-.
T Consensus 382 wd~~~~~-~~~~-------l~gH~~~V~sva~Sp~g-~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~s 452 (524)
T 2j04_B 382 VPSRAAF-AVHP-------LVSRETTITAIGVSRLH-PMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYS 452 (524)
T ss_dssp EETTCTT-CCEE-------EEECSSCEEEEECCSSC-CBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCC
T ss_pred EECcccc-ccee-------eecCCCceEEEEeCCCC-CeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccC
Confidence 9999544 3222 56799999999999999 899999999999999976431110 0 00001000
Q ss_pred c------------------CCCCccccccccceeEEEEEccCCC---EEEEeC-CCeEEEEECCC
Q 015363 329 E------------------APGTRSFFTEIIASISDIKFARNGR---HILSRD-YMTLKLWDINM 371 (408)
Q Consensus 329 ~------------------~~~~~~~~~~h~~~i~~~~~spdg~---~l~s~~-d~~v~~wd~~~ 371 (408)
. .......+.+|...|.+++|+|++. +||+|+ +|.|+||+++-
T Consensus 453 p~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 453 IKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp SSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred CCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 0 0123345678999999999999954 999996 59999999975
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-31 Score=239.40 Aligned_cols=253 Identities=12% Similarity=0.092 Sum_probs=186.3
Q ss_pred eeccceEEEEECC-CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 33 QEVDIISAIEFDK-SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 33 ~h~~~V~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
+|.+.|.+++|+| ++++|++|+.|+.|++||+.+... .......+|.
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---------------------~~~~~~~~~~----------- 163 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI---------------------QVFAKTDSWD----------- 163 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE---------------------EEEECCCCSS-----------
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce---------------------EEEeccCCCC-----------
Confidence 5999999999999 689999999999999999875321 1111122333
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCC-eeeccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG-CGERNF 190 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~l~~~~ 190 (408)
..|.+++|+|+ +.+|++++.|+.|++||+. ++....+..+. +.+. +++|+|+++ .+
T Consensus 164 -~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~--------~~v~-------~~~~~~~~~~~l---- 220 (383)
T 3ei3_B 164 -YWYCCVDVSVS--RQMLATGDSTGRLLLLGLD-GHEIFKEKLHK--------AKVT-------HAEFNPRCDWLM---- 220 (383)
T ss_dssp -CCEEEEEEETT--TTEEEEEETTSEEEEEETT-SCEEEEEECSS--------SCEE-------EEEECSSCTTEE----
T ss_pred -CCeEEEEECCC--CCEEEEECCCCCEEEEECC-CCEEEEeccCC--------CcEE-------EEEECCCCCCEE----
Confidence 66999999765 7899999999999999995 55555554432 2344 789999998 66
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
++++.|+.|++|| +..... ...+... .+|...|++++|+| ++.+|+++ .|+.|++||+++.....
T Consensus 221 --------~s~~~d~~i~iwd-~~~~~~--~~~~~~~--~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 221 --------ATSSVDATVKLWD-LRNIKD--KNSYIAE--MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp --------EEEETTSEEEEEE-GGGCCS--TTCEEEE--EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred --------EEEeCCCEEEEEe-CCCCCc--ccceEEE--ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 9999999999999 543221 1222333 36889999999999 99999999 89999999999655433
Q ss_pred eEeecCCCcccCCc----------CCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccc
Q 015363 269 NIVDVKPANMEDLT----------EVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFT 338 (408)
Q Consensus 269 ~~~~~~~~~~~~~~----------~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (408)
.+.. .......|. ..+..++|+|++ ++ +++.|+.|++||+++++.+ ..+.++.
T Consensus 288 ~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd~~~~~~~----~~l~~~~--------- 350 (383)
T 3ei3_B 288 QIII-HPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYDANSGGLV----HQLRDPN--------- 350 (383)
T ss_dssp EEEE-CCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEETTTCCEE----EEECBTT---------
T ss_pred cccc-ccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEecCCCcee----eeecCCC---------
Confidence 3221 111111222 334456777777 55 7778999999999998654 5555431
Q ss_pred cccceeEEEEEccCCCEEEEeCCCeEEEEECCC
Q 015363 339 EIIASISDIKFARNGRHILSRDYMTLKLWDINM 371 (408)
Q Consensus 339 ~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~ 371 (408)
|...+..++|+|++++|++|+|+.|++||+++
T Consensus 351 -~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 351 -AAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp -BCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred -CCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 23567788999999999999999999999974
No 75
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.7e-30 Score=229.42 Aligned_cols=272 Identities=14% Similarity=0.242 Sum_probs=193.9
Q ss_pred CcccceeeecccCcC--cccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCcc
Q 015363 13 QPLEWKFSQVFGERT--AGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEF 90 (408)
Q Consensus 13 ~~~~w~~~~~~~~~~--~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 90 (408)
.-..|++........ .....+|.+.|++++|+|++++|++|+.|+.|++|+......
T Consensus 62 ~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~--------------------- 120 (340)
T 4aow_A 62 TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT--------------------- 120 (340)
T ss_dssp CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE---------------------
T ss_pred eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccce---------------------
Confidence 345688765211110 112346899999999999999999999999999999876542
Q ss_pred ceeeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEee
Q 015363 91 RYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGS 170 (408)
Q Consensus 91 ~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (408)
......+. ..+..+.++| ++.+|++++.|+.+++||+........... .+ ...+.
T Consensus 121 --~~~~~~~~------------~~~~~~~~~~--~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~-~~------~~~v~-- 175 (340)
T 4aow_A 121 --TRRFVGHT------------KDVLSVAFSS--DNRQIVSGSRDKTIKLWNTLGVCKYTVQDE-SH------SEWVS-- 175 (340)
T ss_dssp --EEEEECCS------------SCEEEEEECT--TSSCEEEEETTSCEEEECTTSCEEEEECSS-SC------SSCEE--
T ss_pred --eeeecCCC------------CceeEEEEee--cCccceeecCCCeEEEEEeCCCceEEEEec-cc------cCccc--
Confidence 23344444 5577788854 477999999999999999987654332211 11 12232
Q ss_pred cCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEE
Q 015363 171 HVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFIS 250 (408)
Q Consensus 171 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 250 (408)
.+.+++++... ++++++.|+.|++|| +.. ..+...+ .+|...|++++|+|++++|++
T Consensus 176 -----~~~~~~~~~~~----------~~~s~~~d~~i~i~d-~~~------~~~~~~~-~~h~~~v~~~~~s~~~~~l~s 232 (340)
T 4aow_A 176 -----CVRFSPNSSNP----------IIVSCGWDKLVKVWN-LAN------CKLKTNH-IGHTGYLNTVTVSPDGSLCAS 232 (340)
T ss_dssp -----EEEECSCSSSC----------EEEEEETTSCEEEEE-TTT------TEEEEEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred -----ceEEccCCCCc----------EEEEEcCCCEEEEEE-CCC------CceeeEe-cCCCCcEEEEEECCCCCEEEE
Confidence 46676665432 237889999999999 433 2333343 789999999999999999999
Q ss_pred e-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceeccccccccccc
Q 015363 251 A-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQE 329 (408)
Q Consensus 251 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 329 (408)
| .|+.|++||++.. ..+.. +. +...+.++.|+|++ . +++++.|+.|++||++++... ..+..+
T Consensus 233 ~s~Dg~i~iwd~~~~-~~~~~-------~~-~~~~v~~~~~~~~~-~-~~~~~~d~~i~iwd~~~~~~~----~~~~~~- 296 (340)
T 4aow_A 233 GGKDGQAMLWDLNEG-KHLYT-------LD-GGDIINALCFSPNR-Y-WLCAATGPSIKIWDLEGKIIV----DELKQE- 296 (340)
T ss_dssp EETTCEEEEEETTTT-EEEEE-------EE-CSSCEEEEEECSSS-S-EEEEEETTEEEEEETTTTEEE----EEECCC-
T ss_pred EeCCCeEEEEEeccC-ceeee-------ec-CCceEEeeecCCCC-c-eeeccCCCEEEEEECCCCeEE----Eecccc-
Confidence 9 9999999999944 34333 22 35679999999997 5 556667999999999987543 222222
Q ss_pred CCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 330 APGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 330 ~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
.......+|...|++++|+|||++|++|+ |+.|++||+++
T Consensus 297 --~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 297 --VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp ---------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred --ceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 11222456778999999999999999985 79999999987
No 76
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-30 Score=227.15 Aligned_cols=262 Identities=13% Similarity=0.179 Sum_probs=198.3
Q ss_pred cccceeeecccCcCcccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCcccee
Q 015363 14 PLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYK 93 (408)
Q Consensus 14 ~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 93 (408)
-..|++... ........|.+.|.+++|+|++++|++|+.||.|++|++..... .+..
T Consensus 41 v~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~--------------------~~~~ 97 (313)
T 3odt_A 41 VRLWSKDDQ---WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG--------------------EDPL 97 (313)
T ss_dssp EEEEEESSS---EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT--------------------SCC-
T ss_pred EEEEECCCC---EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC--------------------CCcc
Confidence 445666431 11223456899999999999999999999999999999876532 1234
Q ss_pred eeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCC
Q 015363 94 TEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVS 173 (408)
Q Consensus 94 ~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 173 (408)
..+.+|. ..|.++.| + +.++++++.|+.|++|| .++....+..+.. .+.
T Consensus 98 ~~~~~~~------------~~i~~~~~--~--~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~--------~v~----- 146 (313)
T 3odt_A 98 YTLIGHQ------------GNVCSLSF--Q--DGVVISGSWDKTAKVWK--EGSLVYNLQAHNA--------SVW----- 146 (313)
T ss_dssp CEECCCS------------SCEEEEEE--E--TTEEEEEETTSEEEEEE--TTEEEEEEECCSS--------CEE-----
T ss_pred cchhhcc------------cCEEEEEe--c--CCEEEEEeCCCCEEEEc--CCcEEEecccCCC--------cee-----
Confidence 5677787 77999999 3 55999999999999999 4555555444322 233
Q ss_pred ceeeEEcc-CCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-
Q 015363 174 AIPKSYMA-NGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA- 251 (408)
Q Consensus 174 ~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~- 251 (408)
.+.+.| ++..+ ++++.++.|++|| . ......+...|...+.+++|+|++. ++++
T Consensus 147 --~~~~~~~~~~~l------------~~~~~d~~i~i~d-~--------~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~ 202 (313)
T 3odt_A 147 --DAKVVSFSENKF------------LTASADKTIKLWQ-N--------DKVIKTFSGIHNDVVRHLAVVDDGH-FISCS 202 (313)
T ss_dssp --EEEEEETTTTEE------------EEEETTSCEEEEE-T--------TEEEEEECSSCSSCEEEEEEEETTE-EEEEE
T ss_pred --EEEEccCCCCEE------------EEEECCCCEEEEe-c--------CceEEEEeccCcccEEEEEEcCCCe-EEEcc
Confidence 577777 77776 9999999999999 2 1222333234888999999999998 7777
Q ss_pred cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCC
Q 015363 252 DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAP 331 (408)
Q Consensus 252 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 331 (408)
.|+.|++||+++.. .... +..|...|++++|+|++ . |++++.|+.|++||+++++.. ..+..|
T Consensus 203 ~dg~i~i~d~~~~~-~~~~-------~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~~~~----~~~~~~--- 265 (313)
T 3odt_A 203 NDGLIKLVDMHTGD-VLRT-------YEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKENGSLK----QVITLP--- 265 (313)
T ss_dssp TTSEEEEEETTTCC-EEEE-------EECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTTCCEE----EEEECS---
T ss_pred CCCeEEEEECCchh-hhhh-------hhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCCCcee----EEEecc---
Confidence 99999999999544 4333 56789999999999998 4 889999999999999998654 555555
Q ss_pred CCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCceeeee
Q 015363 332 GTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 332 ~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~ 380 (408)
...|.+++|+|++++++++.|+.|++||+++ ++.+....
T Consensus 266 ---------~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~-~~~~~~~~ 304 (313)
T 3odt_A 266 ---------AISIWSVDCMSNGDIIVGSSDNLVRIFSQEK-SRWASEDE 304 (313)
T ss_dssp ---------SSCEEEEEECTTSCEEEEETTSCEEEEESCG-GGCCC---
T ss_pred ---------CceEEEEEEccCCCEEEEeCCCcEEEEeCCC-Cceeehhh
Confidence 4689999999999977666789999999987 45554443
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-30 Score=231.68 Aligned_cols=285 Identities=14% Similarity=0.198 Sum_probs=208.2
Q ss_pred ceeeccceEEEEECCC---CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccc
Q 015363 31 EVQEVDIISAIEFDKS---GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLK 107 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~---~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~ 107 (408)
...|.+.|++++|+|+ |++|++|+.||.|+||++.+... .....+.+|.
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---------------------~~~~~~~~h~------- 86 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---------------------TIPKAQQMHT------- 86 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---------------------EEEEEEEECS-------
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---------------------eeEEEecccc-------
Confidence 3579999999999999 69999999999999999986321 1235677888
Q ss_pred ccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEE--ccCCCe
Q 015363 108 SLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSY--MANGGC 185 (408)
Q Consensus 108 ~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~ 185 (408)
..|++++|+| ++.+|++++.|+.|++||+.+++....... .+.+. ++.| ++++..
T Consensus 87 -----~~v~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---------~~~v~-------~~~~~~~~~~~~ 143 (368)
T 3mmy_A 87 -----GPVLDVCWSD--DGSKVFTASCDKTAKMWDLSSNQAIQIAQH---------DAPVK-------TIHWIKAPNYSC 143 (368)
T ss_dssp -----SCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEEC---------SSCEE-------EEEEEECSSCEE
T ss_pred -----CCEEEEEECc--CCCEEEEEcCCCcEEEEEcCCCCceeeccc---------cCceE-------EEEEEeCCCCCE
Confidence 7799999975 488999999999999999999987664432 22344 6788 888888
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCC
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEIS 264 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~ 264 (408)
+ ++++.|+.|++|| +... ++...+ ..+ ..+.++.+.+ ..++++ .++.+.+|+++..
T Consensus 144 l------------~~~~~dg~i~vwd-~~~~------~~~~~~-~~~-~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 144 V------------MTGSWDKTLKFWD-TRSS------NPMMVL-QLP-ERCYCADVIY--PMAVVATAERGLIVYQLENQ 200 (368)
T ss_dssp E------------EEEETTSEEEEEC-SSCS------SCSEEE-ECS-SCEEEEEEET--TEEEEEEGGGCEEEEECSSS
T ss_pred E------------EEccCCCcEEEEE-CCCC------cEEEEE-ecC-CCceEEEecC--CeeEEEeCCCcEEEEEeccc
Confidence 7 9999999999999 5432 222332 333 3455666554 466776 8999999999965
Q ss_pred CceeeEeecCCCcccCCcCCeEEEEEcCCCCce----EEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccc
Q 015363 265 NQSFNIVDVKPANMEDLTEVITSAEFHPTHCNM----LAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEI 340 (408)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 340 (408)
....... ...+...+.++.+.++. .. +++++.|+.|++||++..... ..+..+.+|..........+|
T Consensus 201 ~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 272 (368)
T 3mmy_A 201 PSEFRRI------ESPLKHQHRCVAIFKDK-QNKPTGFALGSIEGRVAIHYINPPNPA-KDNFTFKCHRSNGTNTSAPQD 272 (368)
T ss_dssp CEEEEEC------CCSCSSCEEEEEEEECT-TSCEEEEEEEETTSEEEEEESSCSCHH-HHSEEEECSEEC----CCCEE
T ss_pred cchhhhc------cccccCCCceEEEcccC-CCCCCeEEEecCCCcEEEEecCCCCcc-ccceeeeeeeccccccccccc
Confidence 5544432 12234445666666555 33 999999999999999887321 222455555432222233444
Q ss_pred cceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeee
Q 015363 341 IASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFM 398 (408)
Q Consensus 341 ~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (408)
...|.+++|+|++++|++++ |+.|++||+++ ++++..+.+|......+....++..+
T Consensus 273 ~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l 330 (368)
T 3mmy_A 273 IYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA-RTKLKTSEQLDQPISACCFNHNGNIF 330 (368)
T ss_dssp ECCEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSCEEEEEECTTSSCE
T ss_pred ccceEEEEEecCCCEEEEEccCCeEEEEECCC-CcEEEEecCCCCCceEEEECCCCCeE
Confidence 45799999999999999985 79999999997 79999999998887777655555544
No 78
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4e-31 Score=240.95 Aligned_cols=274 Identities=16% Similarity=0.219 Sum_probs=199.5
Q ss_pred cceeeccceEEEEECCC-CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 30 EEVQEVDIISAIEFDKS-GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
....|.+.|++++|+|+ +.+||+|+.+|.|+||++....... ...........+.+|.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~-------------~~~~~~~~~~~~~~h~-------- 181 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP-------------EPSGECQPDLRLRGHQ-------- 181 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC-------------CTTCCCCCSEEEECCS--------
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc-------------CccccCCCcEEecCCC--------
Confidence 34679999999999997 7899999999999999987632110 0001233456778888
Q ss_pred cccccceeEEEEeecCCCc-EEEEEeCCCeEEEEEcCCCcE-------EEEeccCCCCcccCCCCCeEeecCCceeeEEc
Q 015363 109 LEIEEKINKIRWCQSANSA-LYLLSTNDKTIKLWKVQEKKV-------KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYM 180 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~-~l~~~~~d~~i~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 180 (408)
..|.+++|+|. +. +|++++.||.|++|++.++.. ...+..+ .+.+. .++|+
T Consensus 182 ----~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h--------~~~v~-------~v~~~ 240 (430)
T 2xyi_A 182 ----KEGYGLSWNPN--LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGH--------TAVVE-------DVAWH 240 (430)
T ss_dssp ----SCCCCEEECTT--STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCC--------SSCEE-------EEEEC
T ss_pred ----CCeEEEEeCCC--CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCC--------CCCEe-------eeEEe
Confidence 77999999765 55 999999999999999987321 1111111 22344 78999
Q ss_pred cC-CCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCeEE
Q 015363 181 AN-GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLRIN 257 (408)
Q Consensus 181 ~~-~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~ 257 (408)
|+ +..+ ++++.++.|++|| +..... ..+...+ ..|...|++++|+|++. +|++| .|+.|+
T Consensus 241 p~~~~~l------------~s~~~dg~i~i~d-~~~~~~---~~~~~~~-~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~ 303 (430)
T 2xyi_A 241 LLHESLF------------GSVADDQKLMIWD-TRNNNT---SKPSHTV-DAHTAEVNCLSFNPYSEFILATGSADKTVA 303 (430)
T ss_dssp SSCTTEE------------EEEETTSEEEEEE-TTCSCS---SSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred CCCCCEE------------EEEeCCCeEEEEE-CCCCCC---CcceeEe-ecCCCCeEEEEeCCCCCCEEEEEeCCCeEE
Confidence 94 5554 8899999999999 543221 1233333 68889999999999987 67788 899999
Q ss_pred EEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccc
Q 015363 258 LWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFF 337 (408)
Q Consensus 258 iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (408)
+||++.....+.. +..|...|++++|+|++..+|++++.|+.|++||++........ .-.....+.....+
T Consensus 304 vwd~~~~~~~~~~-------~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~ 374 (430)
T 2xyi_A 304 LWDLRNLKLKLHS-------FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST--EDAEDGPPELLFIH 374 (430)
T ss_dssp EEETTCTTSCSEE-------EECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH--HHHHHCCTTEEEEC
T ss_pred EEeCCCCCCCeEE-------eecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc--cccccCCcceEEEc
Confidence 9999965554443 56789999999999999668999999999999999874321000 00000011222334
Q ss_pred ccccceeEEEEEccCCC-EEEEeC-CCeEEEEECCC
Q 015363 338 TEIIASISDIKFARNGR-HILSRD-YMTLKLWDINM 371 (408)
Q Consensus 338 ~~h~~~i~~~~~spdg~-~l~s~~-d~~v~~wd~~~ 371 (408)
.+|...|.+++|+|++. +|++++ |+.|++|++..
T Consensus 375 ~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 375 GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 56678899999999999 788875 69999999974
No 79
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.7e-30 Score=246.51 Aligned_cols=259 Identities=14% Similarity=0.180 Sum_probs=203.9
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|.+.|++++|+|+|++||+++ ++.|+||++.++.. ..+....+.+|.
T Consensus 14 ~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~-------------------~~~~~~~~~~h~---------- 63 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDS-------------------KVPPVVQFTGHG---------- 63 (615)
T ss_dssp CCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCC-------------------SSCSEEEECTTT----------
T ss_pred CCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCC-------------------ccccceEEecCC----------
Confidence 346899999999999999999998 78999999986511 012356788888
Q ss_pred cccc-eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC--------cEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc
Q 015363 111 IEEK-INKIRWCQSANSALYLLSTNDKTIKLWKVQEK--------KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA 181 (408)
Q Consensus 111 ~~~~-v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 181 (408)
.. |++++|+|..++++|++++.||.|++||+.++ +....+..+ .+.+. .++|+|
T Consensus 64 --~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~--------~~~v~-------~~~~s~ 126 (615)
T 1pgu_A 64 --SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL--------AGPIS-------DISWDF 126 (615)
T ss_dssp --TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC--------SSCEE-------EEEECT
T ss_pred --CceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcc--------cccEE-------EEEEeC
Confidence 88 99999976215889999999999999999755 333333322 22344 789999
Q ss_pred CCCeeecccccccCccccCCCCC----ceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCe
Q 015363 182 NGGCGERNFGCASNDSSFPPGGV----SSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLR 255 (408)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~ 255 (408)
+++.+ ++++.+ +.|.+|+ . ...... +.+|...|.+++|+|+++ .++++ .|+.
T Consensus 127 ~~~~l------------~~~~~~~~~~~~v~~~d-~--------~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 184 (615)
T 1pgu_A 127 EGRRL------------CVVGEGRDNFGVFISWD-S--------GNSLGE-VSGHSQRINACHLKQSRPMRSMTVGDDGS 184 (615)
T ss_dssp TSSEE------------EEEECCSSCSEEEEETT-T--------CCEEEE-CCSCSSCEEEEEECSSSSCEEEEEETTTE
T ss_pred CCCEE------------EEeccCCCCccEEEEEE-C--------CCccee-eecCCccEEEEEECCCCCcEEEEEeCCCc
Confidence 99987 777666 7899988 2 122333 378999999999999997 78888 9999
Q ss_pred EEEEeCCCCCceeeEeecCCCcccCCcC---CeEEEEEcCC-CCceEEEEeCCCeEEEEEcCCCceeccccccc-ccccC
Q 015363 256 INLWNLEISNQSFNIVDVKPANMEDLTE---VITSAEFHPT-HCNMLAYSSSKGSIRLIDMRQSALCDTHSKLF-EEQEA 330 (408)
Q Consensus 256 i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~ 330 (408)
|++||+.. .+.... +..|.. .|++++|+|+ + ++|++++.|+.|++||+++++.. ..+ ..
T Consensus 185 v~vwd~~~-~~~~~~-------~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~--- 248 (615)
T 1pgu_A 185 VVFYQGPP-FKFSAS-------DRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFL----KYIEDD--- 248 (615)
T ss_dssp EEEEETTT-BEEEEE-------ECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEE----EECCBT---
T ss_pred EEEEeCCC-cceeee-------ecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEe----EEeccc---
Confidence 99999984 344333 567888 8999999999 8 99999999999999999988654 444 20
Q ss_pred CCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec
Q 015363 331 PGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
..+|...|.+++|+ ++++|++++ |+.|++||+++ ++.+..+..+
T Consensus 249 ------~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~ 293 (615)
T 1pgu_A 249 ------QEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT-SKCVQKWTLD 293 (615)
T ss_dssp ------TBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT-TEEEEEEECC
T ss_pred ------ccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCC
Confidence 00235789999999 999999985 79999999997 7888888877
No 80
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.8e-30 Score=223.77 Aligned_cols=275 Identities=15% Similarity=0.209 Sum_probs=205.5
Q ss_pred eEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeE
Q 015363 38 ISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK 117 (408)
Q Consensus 38 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~ 117 (408)
+++|+||+++ +||+| .|++|+|||+.+++.. ....+.+|. ..|++
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~---------------------~~~~~~~~~------------~~V~~ 72 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDIL---------------------QLLQMEQPG------------EYISS 72 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEE---------------------EEEECCSTT------------CCEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEE---------------------EEEEecCCC------------CeEEE
Confidence 5789999886 77776 4899999999887531 112234555 67999
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCcc
Q 015363 118 IRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDS 197 (408)
Q Consensus 118 v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 197 (408)
++|+|+ +++|++|+.|++|++|++++++.......+... ...+++++..+
T Consensus 73 v~~~~~--~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~-----------------~~~~~~~~~~l----------- 122 (318)
T 4ggc_A 73 VAWIKE--GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR-----------------VGSLSWNSYIL----------- 122 (318)
T ss_dssp EEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-----------------EEEEEEETTEE-----------
T ss_pred EEECCC--CCEEEEEECCCcEEEeecCCceeEEEecCccce-----------------EEEeecCCCEE-----------
Confidence 999754 889999999999999999999988877765433 34566667766
Q ss_pred ccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCC
Q 015363 198 SFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPA 276 (408)
Q Consensus 198 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~ 276 (408)
++++.++.+++|+ .... ...... ..+|...+..+++++++++|+++ .|+.|++||+++.+...... .
T Consensus 123 -~s~~~~~~~~~~~-~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~ 190 (318)
T 4ggc_A 123 -SSGSRSGHIHHHD-VRVA-----EHHVAT-LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPL----Q 190 (318)
T ss_dssp -EEEETTSEEEEEE-TTSS-----SCEEEE-EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCS----E
T ss_pred -EEEecCCceEeee-cCCC-----ceeEEE-EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccce----e
Confidence 8999999999988 3221 112222 37888999999999999999999 99999999998554322111 1
Q ss_pred cccCCcCCeEEEEEcCCCCceE--EEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 277 NMEDLTEVITSAEFHPTHCNML--AYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 277 ~~~~~~~~v~~~~~~p~~~~~l--~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
....+...|.++.++|++..++ ++++.++.|++||.+..... .... + ...+..+.|+|++.
T Consensus 191 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~----~~~~-~------------~~~v~~~~~~~~~~ 253 (318)
T 4ggc_A 191 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL----SAVD-A------------HSQVCSILWSPHYK 253 (318)
T ss_dssp EECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE----EEEE-C------------SSCEEEEEEETTTT
T ss_pred eecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc----cccc-c------------eeeeeeeeeccccc
Confidence 1455778899999999885555 35567899999999887543 2222 2 25789999999999
Q ss_pred EEEEe---CCCeEEEEECCCCCCceeeeeecccccceEEecCCCeeee---eeceeeec
Q 015363 355 HILSR---DYMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMG---LDNIHTLY 407 (408)
Q Consensus 355 ~l~s~---~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~~~~ 407 (408)
.++++ .|+.|++||+++ +++++++.+|......+....++..++ .|...+||
T Consensus 254 ~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iW 311 (318)
T 4ggc_A 254 ELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 311 (318)
T ss_dssp EEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred ceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 88764 369999999998 799999999999887777555555442 35555554
No 81
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.9e-30 Score=265.40 Aligned_cols=251 Identities=15% Similarity=0.266 Sum_probs=189.9
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++|+|+|++||+|+.||+|+|||+.+++ .+..+.+|.
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~-----------------------~~~~~~~h~---------- 657 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE-----------------------KLLDIKAHE---------- 657 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----------------------EEEEECCCS----------
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC-----------------------EEEEeccCC----------
Confidence 34799999999999999999999999999999998765 346778888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.+++|+|+ +.++++++.|++|++||+.+++....+..+.. .+. ++.|+|++...
T Consensus 658 --~~v~~~~~s~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--------~v~-------~~~~~~~~~~~---- 714 (1249)
T 3sfz_A 658 --DEVLCCAFSSD--DSYIATCSADKKVKIWDSATGKLVHTYDEHSE--------QVN-------CCHFTNKSNHL---- 714 (1249)
T ss_dssp --SCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEE-------EEEECSSSSCC----
T ss_pred --CCEEEEEEecC--CCEEEEEeCCCeEEEEECCCCceEEEEcCCCC--------cEE-------EEEEecCCCce----
Confidence 77999999755 88999999999999999999988887766532 344 68898854321
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++++++.|+.|++|| +.. ..+...+ .+|...|++++|+|++++|+++ .|+.|++||+..... ..
T Consensus 715 ------~l~sg~~d~~v~vwd-~~~------~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~-~~ 779 (1249)
T 3sfz_A 715 ------LLATGSNDFFLKLWD-LNQ------KECRNTM-FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANE-RK 779 (1249)
T ss_dssp ------EEEEEETTSCEEEEE-TTS------SSEEEEE-CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEE-EE
T ss_pred ------EEEEEeCCCeEEEEE-CCC------cchhhee-cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcc-cc
Confidence 138899999999999 433 3344443 7899999999999999999999 999999999984432 22
Q ss_pred EeecCC------------------------------------------------CcccCCcCCeEEEEEcCCCCceEEEE
Q 015363 270 IVDVKP------------------------------------------------ANMEDLTEVITSAEFHPTHCNMLAYS 301 (408)
Q Consensus 270 ~~~~~~------------------------------------------------~~~~~~~~~v~~~~~~p~~~~~l~s~ 301 (408)
.+.... ....+|...+.+++|+|++ .+++++
T Consensus 780 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~ 858 (1249)
T 3sfz_A 780 SINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIA 858 (1249)
T ss_dssp EEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST-TEEEEE
T ss_pred eecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC-CEEEEE
Confidence 111100 0012677889999999999 999999
Q ss_pred eCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEEC
Q 015363 302 SSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDI 369 (408)
Q Consensus 302 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~ 369 (408)
+.|+.|++||+.++... ..+.+| ...|.+++|+|+|++|++++ |+.|++||+
T Consensus 859 ~~dg~v~vwd~~~~~~~----~~~~~h------------~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 859 LSQYCVELWNIDSRLKV----ADCRGH------------LSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp CSSSCEEEEETTTTEEE----EEECCC------------SSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred eCCCeEEEEEcCCCcee----eecCCC------------ccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 99999999999987543 444444 34455555555555555543 455555553
No 82
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-31 Score=238.48 Aligned_cols=283 Identities=10% Similarity=0.101 Sum_probs=190.7
Q ss_pred CcccceeeecccCcCcccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccce
Q 015363 13 QPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRY 92 (408)
Q Consensus 13 ~~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 92 (408)
.-..|+....- .........|.+.|++++|+|++++|++|+.||.|+|||+.++.. ...
T Consensus 34 ~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~--------------------~~~ 92 (377)
T 3dwl_C 34 QVELYEQDGNG-WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT--------------------WKQ 92 (377)
T ss_dssp CBCEEEEETTE-EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C--------------------CCC
T ss_pred EEEEEEccCCc-eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc--------------------eee
Confidence 45567776410 012223457999999999999999999999999999999987641 112
Q ss_pred eeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE---EEEecc-CCCCcccCCCCCeE
Q 015363 93 KTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV---KKVFDW-NVHPEKAAGNGPIF 168 (408)
Q Consensus 93 ~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~---~~~~~~-~~~~~~~~~~~~v~ 168 (408)
...+.+|. ..|.+++|+|+ +.+|++++.|+.|++||+++++. ...+.. + .+.+.
T Consensus 93 ~~~~~~~~------------~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h--------~~~v~ 150 (377)
T 3dwl_C 93 TLVLLRLN------------RAATFVRWSPN--EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPL--------RSTIL 150 (377)
T ss_dssp EEECCCCS------------SCEEEEECCTT--SSCCEEEESSSCEEECCC-----CCCCEEECSSC--------CSCEE
T ss_pred eeEecccC------------CceEEEEECCC--CCEEEEEecCCeEEEEEECCcccceeeeEeeccc--------CCCeE
Confidence 34566777 77999999764 88999999999999999998762 333332 2 23344
Q ss_pred eecCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccc------------cccccceeeccccccce
Q 015363 169 GSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETN------------LVAGCRRIYAHAHDYHI 236 (408)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~v 236 (408)
+++|+|+++.+ ++++.|+.|++|| +...... ....+...+ .|...|
T Consensus 151 -------~~~~~~~~~~l------------~~~~~d~~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v 208 (377)
T 3dwl_C 151 -------SLDWHPNNVLL------------AAGCADRKAYVLS-AYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWV 208 (377)
T ss_dssp -------EEEECTTSSEE------------EEEESSSCEEEEE-ECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSE
T ss_pred -------EEEEcCCCCEE------------EEEeCCCEEEEEE-EEecccCCCccccccccccchhhhhhcc--cCCceE
Confidence 78999999987 9999999999999 5422111 112333333 888999
Q ss_pred EEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCC
Q 015363 237 NSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQS 315 (408)
Q Consensus 237 ~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 315 (408)
++++|+|++++|+++ .|+.|++||+++.......+ ..+..|...|.+++|+|++ ++|++++.++.+ +|+....
T Consensus 209 ~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~~~ 282 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL----ITVKLSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGNES 282 (377)
T ss_dssp EEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC----CCEECSSSCEEEEEEEETT-EEEEEESSSSEE-EECCCC-
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee----EeecCCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeCCC
Confidence 999999999999999 99999999999655422111 2367899999999999999 899988766665 6666532
Q ss_pred c-eecccccccccccCC--------------------------------------CCccccccccceeEEEEEccCC-C-
Q 015363 316 A-LCDTHSKLFEEQEAP--------------------------------------GTRSFFTEIIASISDIKFARNG-R- 354 (408)
Q Consensus 316 ~-~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~h~~~i~~~~~spdg-~- 354 (408)
. .+. ..+...... ........|...|.++++.+.. .
T Consensus 283 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~ 359 (377)
T 3dwl_C 283 GWAHT---RDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGN 359 (377)
T ss_dssp --CCS---BCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTE
T ss_pred ceEEE---eeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCc
Confidence 2 110 111100000 0111223488999999977643 3
Q ss_pred --EEEEe-CCCeEEEEEC
Q 015363 355 --HILSR-DYMTLKLWDI 369 (408)
Q Consensus 355 --~l~s~-~d~~v~~wd~ 369 (408)
.|+|| .||.|++||+
T Consensus 360 ~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 360 ITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEEETTSEEEEECC
T ss_pred eEEEEeecCCCcEEEecC
Confidence 57777 5899999986
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-30 Score=233.41 Aligned_cols=260 Identities=11% Similarity=0.205 Sum_probs=198.0
Q ss_pred eEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeecc-CCccccccccccccccee
Q 015363 38 ISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQS-HEPEFDYLKSLEIEEKIN 116 (408)
Q Consensus 38 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-h~~~~~~~~~~~~~~~v~ 116 (408)
+.+++|++ ..+++++.||.|+||++.++.. ...+.. |. ..|.
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~-----------------------~~~~~~~~~------------~~v~ 138 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSV-----------------------SALAETDES------------TYVA 138 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCE-----------------------EEEEECCTT------------CCEE
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcE-----------------------eEeeecCCC------------CCEE
Confidence 55577765 5588889999999999987753 222332 55 7799
Q ss_pred EEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCc
Q 015363 117 KIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASND 196 (408)
Q Consensus 117 ~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (408)
+++|+| ++.+|++++.||.|++||+.+++....+..+.. .+. ++.| ++..+
T Consensus 139 ~v~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------~v~-------~~~~--~~~~l---------- 189 (401)
T 4aez_A 139 SVKWSH--DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA--------RVG-------CLSW--NRHVL---------- 189 (401)
T ss_dssp EEEECT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--------CEE-------EEEE--ETTEE----------
T ss_pred EEEECC--CCCEEEEECCCCeEEEEECcCCeEEEEecCCCC--------ceE-------EEEE--CCCEE----------
Confidence 999975 488999999999999999999988777765432 333 4666 45565
Q ss_pred cccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCC
Q 015363 197 SSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKP 275 (408)
Q Consensus 197 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~ 275 (408)
++++.++.|++|| +... ...... ..+|...|.+++|+|++++|+++ .|+.|++||+++......
T Consensus 190 --~~~~~dg~i~i~d-~~~~-----~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~------ 254 (401)
T 4aez_A 190 --SSGSRSGAIHHHD-VRIA-----NHQIGT-LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT------ 254 (401)
T ss_dssp --EEEETTSEEEEEE-TTSS-----SCEEEE-EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE------
T ss_pred --EEEcCCCCEEEEe-cccC-----cceeeE-EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE------
Confidence 9999999999999 5321 122233 37889999999999999999999 899999999995443322
Q ss_pred CcccCCcCCeEEEEEcCCCCceEEEEe--CCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCC
Q 015363 276 ANMEDLTEVITSAEFHPTHCNMLAYSS--SKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNG 353 (408)
Q Consensus 276 ~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg 353 (408)
+..|...|.+++|+|++..++++++ .|+.|++||+++++.. ..+..+ ..|.+++|+|++
T Consensus 255 --~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~----~~~~~~-------------~~v~~~~~s~~~ 315 (401)
T 4aez_A 255 --KTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV----NTVDAG-------------SQVTSLIWSPHS 315 (401)
T ss_dssp --ECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE----EEEECS-------------SCEEEEEECSSS
T ss_pred --ecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE----EEEeCC-------------CcEEEEEECCCC
Confidence 4678899999999998867888876 7999999999988654 444333 579999999999
Q ss_pred CEEEE--e-CCCeEEEEECCCCCCceee--eeecccccceEEecCCCeee
Q 015363 354 RHILS--R-DYMTLKLWDINMDSGPVAT--FQVHEHLRPKVMHSSKNYFM 398 (408)
Q Consensus 354 ~~l~s--~-~d~~v~~wd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 398 (408)
++|++ | .|+.|++||+.+ ++.... +.+|......+....++..+
T Consensus 316 ~~l~~~~g~~dg~i~v~~~~~-~~~~~~~~~~~h~~~v~~~~~s~dg~~l 364 (401)
T 4aez_A 316 KEIMSTHGFPDNNLSIWSYSS-SGLTKQVDIPAHDTRVLYSALSPDGRIL 364 (401)
T ss_dssp SEEEEEECTTTCEEEEEEEET-TEEEEEEEEECCSSCCCEEEECTTSSEE
T ss_pred CeEEEEeecCCCcEEEEecCC-ccceeEEEecCCCCCEEEEEECCCCCEE
Confidence 99998 5 369999999987 444443 66787776666654455443
No 84
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.5e-31 Score=238.10 Aligned_cols=257 Identities=12% Similarity=0.186 Sum_probs=197.0
Q ss_pred cceeeccceEEEEECC-CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 30 EEVQEVDIISAIEFDK-SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
...+|.+.|++++|+| ++++||+|+.||.|+||++.++.... ...+.+..+.+|.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~----------------~~~~~~~~~~~h~-------- 131 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL----------------PLREPVITLEGHT-------- 131 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS----------------CBCSCSEEEECCS--------
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc----------------ccCCceEEecCCC--------
Confidence 3457999999999999 89999999999999999998764210 0112345678888
Q ss_pred cccccceeEEEEeecCCC-cEEEEEeCCCeEEEEEcCCCcEEEEe--ccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 109 LEIEEKINKIRWCQSANS-ALYLLSTNDKTIKLWKVQEKKVKKVF--DWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
..|.+++|+|+ + .+|++++.|+.|++||+.+++....+ ..+ .+.+. +++|+|++..
T Consensus 132 ----~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------~~~v~-------~~~~~~~~~~ 190 (402)
T 2aq5_A 132 ----KRVGIVAWHPT--AQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVH--------PDTIY-------SVDWSRDGAL 190 (402)
T ss_dssp ----SCEEEEEECSS--BTTEEEEEETTSCEEEEETTTTEEEEEECTTTC--------CSCEE-------EEEECTTSSC
T ss_pred ----CeEEEEEECcC--CCCEEEEEcCCCEEEEEECCCCCccEEEecCCC--------CCceE-------EEEECCCCCE
Confidence 77999999765 5 59999999999999999999887776 333 22344 7899999998
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccc-eEEEEeCCCCCEEEEe----cCCeEEEEe
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYH-INSISNNSDGETFISA----DDLRINLWN 260 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~l~~~----~d~~i~iwd 260 (408)
+ ++++.|+.|++|| +.. ......+...|... +.+++|+|++.+|++| .|+.|++||
T Consensus 191 l------------~~~~~d~~i~iwd-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 191 I------------CTSCRDKRVRVIE-PRK------GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp E------------EEEETTSEEEEEE-TTT------TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred E------------EEEecCCcEEEEe-CCC------CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence 7 9999999999999 533 22233322456554 8899999999999987 699999999
Q ss_pred CCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEE-EEeCCCeEEEEEcCCCceecccccccccccCCCCcccccc
Q 015363 261 LEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLA-YSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTE 339 (408)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (408)
++......... ...|...+.+++|+|++ .+|+ +|+.|+.|++||+.+++... ..+..+.
T Consensus 252 ~~~~~~~~~~~------~~~~~~~v~~~~~s~~~-~~l~~~g~~dg~i~i~d~~~~~~~~---~~l~~~~---------- 311 (402)
T 2aq5_A 252 TKHLEEPLSLQ------ELDTSSGVLLPFFDPDT-NIVYLCGKGDSSIRYFEITSEAPFL---HYLSMFS---------- 311 (402)
T ss_dssp TTBCSSCSEEE------ECCCCSSCEEEEEETTT-TEEEEEETTCSCEEEEEECSSTTCE---EEEEEEC----------
T ss_pred CccccCCceEE------eccCCCceeEEEEcCCC-CEEEEEEcCCCeEEEEEecCCCcce---Eeecccc----------
Confidence 99655534332 12456779999999999 6665 56679999999999876311 3333331
Q ss_pred ccceeEEEEEccCCCEEEEeCCCeEEEEECCC
Q 015363 340 IIASISDIKFARNGRHILSRDYMTLKLWDINM 371 (408)
Q Consensus 340 h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~ 371 (408)
|...|.+++|+|++.+++++ ++.+++|++.+
T Consensus 312 ~~~~v~~~~~sp~~~~~~s~-~~~~~~~~l~~ 342 (402)
T 2aq5_A 312 SKESQRGMGYMPKRGLEVNK-CEIARFYKLHE 342 (402)
T ss_dssp CSSCCSEEEECCGGGSCGGG-TEEEEEEEEET
T ss_pred cCCcccceEEecccccceec-ceeEEEEEcCC
Confidence 23689999999999988764 45999999986
No 85
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.4e-30 Score=235.59 Aligned_cols=225 Identities=11% Similarity=0.011 Sum_probs=166.3
Q ss_pred cceeEEEEeecCCCcEE-EEEeCCCeEEEEEcC--CCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 113 EKINKIRWCQSANSALY-LLSTNDKTIKLWKVQ--EKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l-~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..|.+++|+|+ +.+| ++++.|+.|++||+. +++....+..+.. ...+. +++|+|+++.+
T Consensus 103 ~~v~~~~~s~d--~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~------~~~v~-------~~~~sp~~~~l--- 164 (450)
T 2vdu_B 103 SYIRNLRLTSD--ESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF------SKRPN-------AISIAEDDTTV--- 164 (450)
T ss_dssp CCEEEEEECTT--SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC------SSCEE-------EEEECTTSSEE---
T ss_pred CceEEEEEcCC--CCEEEEEECCCCeEEEEECcCCCCceeeeeecccC------CCCce-------EEEEcCCCCEE---
Confidence 57999999755 7786 888999999999999 7776666543211 12233 78999999988
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC---CCEEEEe-cCCeEEEEeCCCCC
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD---GETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~---~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.++.+++|+ +....... .+... +.+|...|++++|+|+ +++|+++ .|+.|++||+++..
T Consensus 165 ---------~~~~~~g~v~~~~-~~~~~~~~--~~~~~-~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 165 ---------IIADKFGDVYSID-INSIPEEK--FTQEP-ILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp ---------EEEETTSEEEEEE-TTSCCCSS--CCCCC-SEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT
T ss_pred ---------EEEeCCCcEEEEe-cCCccccc--cccee-eecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc
Confidence 8999999999999 54432211 02223 3678899999999999 8999999 89999999998544
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCc-----------
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTR----------- 334 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----------- 334 (408)
..... +.+|...|++++|+ ++ .+|++++.|+.|++||+++++.. ..+..+......
T Consensus 232 ~~~~~-------~~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 232 IVDKW-------LFGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKTGKNL----STFDYNSLIKPYLNDQHLAPPRF 298 (450)
T ss_dssp CEEEE-------CCCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTTCCEE----EEEECHHHHGGGCCTTSBC----
T ss_pred eeeee-------ecCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCCCcEe----eeecchhhhhhhhhhcccccccc
Confidence 33322 46799999999999 88 99999999999999999998654 333221100000
Q ss_pred --cccccccceeEEEEEccCCCEEEEeC--CCeEEEEEC--CCCC---Cceeeeeec
Q 015363 335 --SFFTEIIASISDIKFARNGRHILSRD--YMTLKLWDI--NMDS---GPVATFQVH 382 (408)
Q Consensus 335 --~~~~~h~~~i~~~~~spdg~~l~s~~--d~~v~~wd~--~~~~---~~~~~~~~~ 382 (408)
.........|.+++|+|++++|++++ ++.|++|++ .. + ..++.+..|
T Consensus 299 ~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~~ 354 (450)
T 2vdu_B 299 QNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITFP 354 (450)
T ss_dssp ------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEECS
T ss_pred cccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEeccC
Confidence 00002235789999999999999874 599999999 43 4 566777777
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.98 E-value=1.2e-29 Score=233.90 Aligned_cols=269 Identities=12% Similarity=0.253 Sum_probs=201.1
Q ss_pred cceeeccc-eEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 30 EEVQEVDI-ISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 30 ~~~~h~~~-V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
...+|.+. +.++.+ ++++|++|+.||+|++||+.+++ .+..+.+|.
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~-----------------------~~~~~~~h~-------- 162 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK-----------------------FLLQLSGHD-------- 162 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE-----------------------EEEEECCCS--------
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc-----------------------EEEEEeCCC--------
Confidence 34568777 467776 56799999999999999987665 356788898
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEc--cCCCee
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYM--ANGGCG 186 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~l 186 (408)
..|.+++|+|+ + ++++++.||+|++||+.+++....+..+.. .+. ++.+. +++..+
T Consensus 163 ----~~V~~l~~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~--------~v~-------~l~~~~~~~~~~l 220 (464)
T 3v7d_B 163 ----GGVWALKYAHG--G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNS--------TVR-------CLDIVEYKNIKYI 220 (464)
T ss_dssp ----SCEEEEEECST--T-EEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEE-------EEEEEESSSCEEE
T ss_pred ----cCEEEEEEcCC--C-EEEEEeCCCCEEEEECCCCcEEEEECCCCC--------ccE-------EEEEecCCCCCEE
Confidence 77999999654 5 999999999999999999988877765432 344 56666 566776
Q ss_pred ecccccccCccccCCCCCceeeeceeeecccccccc-----------------ccceeeccccccceEEEEeCCCCCEEE
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVA-----------------GCRRIYAHAHDYHINSISNNSDGETFI 249 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~v~~i~~~~~~~~l~ 249 (408)
++++.|+.|++|| +......... ..... ..+|...+.++ ++++++++
T Consensus 221 ------------~s~s~d~~i~vwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~--~~~~~~l~ 284 (464)
T 3v7d_B 221 ------------VTGSRDNTLHVWK-LPKESSVPDHGEEHDYPLVFHTPEENPYFVGV-LRGHMASVRTV--SGHGNIVV 284 (464)
T ss_dssp ------------EEEETTSCEEEEE-CCCCCCC------CCSSEEESCGGGCTTEEEE-ECCCSSCEEEE--EEETTEEE
T ss_pred ------------EEEcCCCcEEEee-CCCCcccccccccCCcceEeeccCCCeEEEEE-ccCccceEEEE--cCCCCEEE
Confidence 9999999999999 5543221100 01222 36788888876 57789999
Q ss_pred Ee-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccc
Q 015363 250 SA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQ 328 (408)
Q Consensus 250 ~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 328 (408)
++ .|+.|++||+++ ...... +.+|...|.+++|+|++ .+|++|+.|+.|++||+++++.+ ..+.+|
T Consensus 285 ~~~~d~~i~vwd~~~-~~~~~~-------~~~~~~~v~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~~----~~~~~h 351 (464)
T 3v7d_B 285 SGSYDNTLIVWDVAQ-MKCLYI-------LSGHTDRIYSTIYDHER-KRCISASMDTTIRIWDLENGELM----YTLQGH 351 (464)
T ss_dssp EEETTSCEEEEETTT-TEEEEE-------ECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEE----EEECCC
T ss_pred EEeCCCeEEEEECCC-CcEEEE-------ecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcEE----EEEeCC
Confidence 99 999999999984 444433 57789999999999999 99999999999999999988654 556555
Q ss_pred cCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeee
Q 015363 329 EAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFM 398 (408)
Q Consensus 329 ~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (408)
...|.+++|+ +.+|++++ |+.|++||+++ +.....+. |......+....++..+
T Consensus 352 ------------~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l 406 (464)
T 3v7d_B 352 ------------TALVGLLRLS--DKFLVSAAADGSIRGWDAND-YSRKFSYH-HTNLSAITTFYVSDNIL 406 (464)
T ss_dssp ------------SSCEEEEEEC--SSEEEEEETTSEEEEEETTT-CCEEEEEE-CTTCCCEEEEEECSSEE
T ss_pred ------------CCcEEEEEEc--CCEEEEEeCCCcEEEEECCC-Cceeeeec-CCCCccEEEEEeCCCEE
Confidence 4789999997 57888875 79999999987 44444432 33334444433444443
No 87
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7.5e-30 Score=227.67 Aligned_cols=259 Identities=10% Similarity=0.129 Sum_probs=197.1
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|.+.|++++|+|++++|++++.||.|++||+.+++. +..+. +.
T Consensus 70 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----------------------~~~~~-~~---------- 115 (369)
T 3zwl_B 70 LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC-----------------------VATWK-SP---------- 115 (369)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE-----------------------EEEEE-CS----------
T ss_pred hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-----------------------EEEee-cC----------
Confidence 346999999999999999999999999999999987653 23333 44
Q ss_pred cccceeEEEEeecCCCcEEEEEeCC-----CeEEEEEcCCCcEEEEeccCCC-C--cccCCCC--CeEeecCCceeeEEc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTND-----KTIKLWKVQEKKVKKVFDWNVH-P--EKAAGNG--PIFGSHVSAIPKSYM 180 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~-~--~~~~~~~--~v~~~~~~~~~~~~~ 180 (408)
..|.+++|+|+ +.++++++.+ +.|++||+.............. . ......+ .+. .++|+
T Consensus 116 --~~v~~~~~~~~--~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 184 (369)
T 3zwl_B 116 --VPVKRVEFSPC--GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT-------VAGWS 184 (369)
T ss_dssp --SCEEEEEECTT--SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE-------EEEEC
T ss_pred --CCeEEEEEccC--CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee-------EEEEc
Confidence 67999999754 8899999998 9999999986542211111100 0 0000011 233 78999
Q ss_pred cCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEE
Q 015363 181 ANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLW 259 (408)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iw 259 (408)
|+++.+ ++++.++.|++|| +... ...... ...|...|.+++|+|++++|+++ .|+.|++|
T Consensus 185 ~~~~~l------------~~~~~dg~i~i~d-~~~~-----~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 185 TKGKYI------------IAGHKDGKISKYD-VSNN-----YEYVDS-IDLHEKSISDMQFSPDLTYFITSSRDTNSFLV 245 (369)
T ss_dssp GGGCEE------------EEEETTSEEEEEE-TTTT-----TEEEEE-EECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCCEE------------EEEcCCCEEEEEE-CCCC-----cEeEEE-EecCCCceeEEEECCCCCEEEEecCCceEEEE
Confidence 999987 8999999999999 4321 222333 36788999999999999999999 89999999
Q ss_pred eCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCC--------------eEEEEEcCCCceeccccccc
Q 015363 260 NLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG--------------SIRLIDMRQSALCDTHSKLF 325 (408)
Q Consensus 260 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~ 325 (408)
|+++.. .... +. +...+..++|+|++ .++++++.++ .+++||+.+++.. ..+
T Consensus 246 d~~~~~-~~~~-------~~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~ 311 (369)
T 3zwl_B 246 DVSTLQ-VLKK-------YE-TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI----GRV 311 (369)
T ss_dssp ETTTCC-EEEE-------EE-CSSCEEEEEECSSS-SEEEEEECCC-------------CEEEEEETTTCCEE----EEE
T ss_pred ECCCCc-eeee-------ec-CCCCceeEEecCCC-ceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch----hhe
Confidence 999544 4333 22 57789999999999 8999999888 8999999988654 555
Q ss_pred ccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 326 EEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
.+| ...|.+++|+|++++|++++ |+.|++|+++. +.....+.
T Consensus 312 ~~~------------~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~-~~~~~~~~ 354 (369)
T 3zwl_B 312 QGH------------FGPLNTVAISPQGTSYASGGEDGFIRLHHFEK-SYFDFKYD 354 (369)
T ss_dssp ECC------------SSCEEEEEECTTSSEEEEEETTSEEEEEEECH-HHHTCCCH
T ss_pred ecc------------cCcEEEEEECCCCCEEEEEcCCCeEEEEECcc-ccchhHHH
Confidence 555 47899999999999999985 79999999986 44444443
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=8.9e-30 Score=220.31 Aligned_cols=242 Identities=14% Similarity=0.166 Sum_probs=171.9
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC--cEEEEeccCCCCcccCCCCCeEeecCCceeeEEccC--CCeeec
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEK--KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN--GGCGER 188 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~l~~ 188 (408)
..|++++|+| +|++|++|+.|++|++||+... +....+..|. +.|. +++|+++ +..+
T Consensus 10 ~~V~~~~~s~--~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~--------~~V~-------~v~~s~~~~g~~l-- 70 (297)
T 2pm7_B 10 EMIHDAVMDY--YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHE--------GPVW-------RVDWAHPKFGTIL-- 70 (297)
T ss_dssp SCEEEEEECT--TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCS--------SCEE-------EEEECCGGGCSEE--
T ss_pred CceEEEEECC--CCCEEEEEeCCCEEEEEecCCCCcEEEEEEcccc--------CCeE-------EEEecCCCcCCEE--
Confidence 7799999965 4889999999999999999753 4445554442 3455 6888753 7776
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC--CCEEEEe-cCCeEEEEeCCCCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD--GETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.|+.|++|| +..... ..... ...|...|++++|+|+ +.+|+++ .|+.|++||++...
T Consensus 71 ----------~s~s~D~~v~iWd-~~~~~~----~~~~~-~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 71 ----------ASCSYDGKVMIWK-EENGRW----SQIAV-HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp ----------EEEETTTEEEEEE-BSSSCB----CCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred ----------EEEcCCCEEEEEE-cCCCce----EEEEE-eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 9999999999999 543211 12222 3678899999999998 8899998 99999999998543
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCC------------CceEEEEeCCCeEEEEEcCCCceecccccccccccCCCC
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTH------------CNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGT 333 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 333 (408)
..... .+.+|...|.+++|+|++ .++|++|+.|++|++||++++.........+.+
T Consensus 135 ~~~~~------~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~------ 202 (297)
T 2pm7_B 135 TTSPI------IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG------ 202 (297)
T ss_dssp CBCCE------EEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC------
T ss_pred ceeee------eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC------
Confidence 22111 256789999999999973 168999999999999999876421111234444
Q ss_pred ccccccccceeEEEEEccCC---CEEEEeC-CCeEEEEECCCCCCc--eeee--eecccccceEEecCCCeeee---eec
Q 015363 334 RSFFTEIIASISDIKFARNG---RHILSRD-YMTLKLWDINMDSGP--VATF--QVHEHLRPKVMHSSKNYFMG---LDN 402 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg---~~l~s~~-d~~v~~wd~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~---~d~ 402 (408)
|...|.+++|+|++ .+|++++ |++|++||++..... ...+ ..|......+....++..++ .|.
T Consensus 203 ------H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~ 276 (297)
T 2pm7_B 203 ------HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (297)
T ss_dssp ------CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS
T ss_pred ------CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC
Confidence 46889999999985 8899985 799999999863211 1222 34555444444333444443 255
Q ss_pred eeeec
Q 015363 403 IHTLY 407 (408)
Q Consensus 403 ~~~~~ 407 (408)
..+||
T Consensus 277 ~v~lw 281 (297)
T 2pm7_B 277 KVTLW 281 (297)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 55555
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.5e-29 Score=260.17 Aligned_cols=295 Identities=15% Similarity=0.207 Sum_probs=221.2
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|.+.|++++|+|++++||+|+.||.|+|||+.+++ .+..+.+|.
T Consensus 653 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~-----------------------~~~~~~~~~---------- 699 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK-----------------------LVHTYDEHS---------- 699 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-----------------------EEEEEECCS----------
T ss_pred eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc-----------------------eEEEEcCCC----------
Confidence 34699999999999999999999999999999998765 356778888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..|.+++|+|+.++.++++++.|+.|++||+.+++....+..+.. .+. +++|+|+++.+
T Consensus 700 --~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~--------~v~-------~~~~sp~~~~l---- 758 (1249)
T 3sfz_A 700 --EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN--------SVN-------HCRFSPDDELL---- 758 (1249)
T ss_dssp --SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS--------CEE-------EEEECSSTTEE----
T ss_pred --CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC--------CEE-------EEEEecCCCEE----
Confidence 779999998876677999999999999999999988877765532 344 68899999887
Q ss_pred ccccCccccCCCCCceeeeceeeecccccc------------------------------------------------cc
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNL------------------------------------------------VA 222 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------------------------------~~ 222 (408)
++++.|+.|++|| +....... ..
T Consensus 759 --------~s~s~dg~v~vwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 759 --------ASCSADGTLRLWD-VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTS 829 (1249)
T ss_dssp --------EEEESSSEEEEEE-GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTC
T ss_pred --------EEEECCCeEEEEe-CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCC
Confidence 8888899999998 43321100 01
Q ss_pred ccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEE
Q 015363 223 GCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYS 301 (408)
Q Consensus 223 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 301 (408)
.....+..+|...+.+++|+|++++++++ .|+.|++||+.+. ..... +.+|...|++++|+|++ .+|+++
T Consensus 830 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~-~~~~~-------~~~h~~~v~~v~~spdg-~~l~s~ 900 (1249)
T 3sfz_A 830 GLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR-LKVAD-------CRGHLSWVHGVMFSPDG-SSFLTA 900 (1249)
T ss_dssp CEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT-EEEEE-------ECCCSSCEEEEEECTTS-SEEEEE
T ss_pred CceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceeee-------cCCCccceEEEEECCCC-CEEEEE
Confidence 11122224788899999999999999999 9999999999944 33332 57899999999999999 999999
Q ss_pred eCCCeEEEEEcCCCceec--------------------------------------------------------------
Q 015363 302 SSKGSIRLIDMRQSALCD-------------------------------------------------------------- 319 (408)
Q Consensus 302 ~~dg~i~iwd~~~~~~~~-------------------------------------------------------------- 319 (408)
+.|+.|++||+.+.....
T Consensus 901 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~ 980 (1249)
T 3sfz_A 901 SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGD 980 (1249)
T ss_dssp ETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEE
T ss_pred eCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEc
Confidence 999999999975321000
Q ss_pred --ccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCe
Q 015363 320 --THSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNY 396 (408)
Q Consensus 320 --~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (408)
..+..+.. ........+.+|...|.+++|+|+|++|++++ |+.|++||+.+ ++.+ .+..|......+....++.
T Consensus 981 ~~g~i~i~d~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~-~~~~-~~~~~~~~v~~~~~~~~~~ 1057 (1249)
T 3sfz_A 981 EDGAIKIIEL-PNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT-GDYV-FLQAHQETVKDFRLLQDSR 1057 (1249)
T ss_dssp TTSCCEEEET-TTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT-TEEE-CCBCCSSCEEEEEECSSSE
T ss_pred CCCCEEEEEc-CCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CceE-EEecCCCcEEEEEEcCCCc
Confidence 00000000 01112233567889999999999999999986 79999999987 4544 4556766665555444555
Q ss_pred eeee
Q 015363 397 FMGL 400 (408)
Q Consensus 397 ~~~~ 400 (408)
++..
T Consensus 1058 l~~~ 1061 (1249)
T 3sfz_A 1058 LLSW 1061 (1249)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5444
No 90
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=3e-29 Score=229.10 Aligned_cols=252 Identities=16% Similarity=0.299 Sum_probs=200.0
Q ss_pred eeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
.|...|+|+++ ++++|++|+.||.|++||+.+++ ....+.+|.
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~-----------------------~~~~~~~h~------------ 173 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE-----------------------CKRILTGHT------------ 173 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC-----------------------EEEEECCCS------------
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe-----------------------EEEEEcCCC------------
Confidence 46778999987 78999999999999999987665 346678888
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..|.+++| + +.++++|+.||+|++||+.+++....+..+.. .+. ++.++ +..+
T Consensus 174 ~~v~~l~~--~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~--------~v~-------~l~~~--~~~l------ 226 (435)
T 1p22_A 174 GSVLCLQY--D--ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE--------AVL-------HLRFN--NGMM------ 226 (435)
T ss_dssp SCEEEEEC--C--SSEEEEEETTSCEEEEESSSCCEEEEECCCCS--------CEE-------EEECC--TTEE------
T ss_pred CcEEEEEE--C--CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC--------cEE-------EEEEc--CCEE------
Confidence 77999998 3 66999999999999999999988777765432 233 45554 3455
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEe
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~ 271 (408)
++++.|+.|++|| +...... ..... ..+|...|.+++| +++++++| .|+.|++||+++. .....
T Consensus 227 ------~s~s~dg~i~vwd-~~~~~~~---~~~~~-~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~-~~~~~- 291 (435)
T 1p22_A 227 ------VTCSKDRSIAVWD-MASPTDI---TLRRV-LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC-EFVRT- 291 (435)
T ss_dssp ------EEEETTSCEEEEE-CSSSSCC---EEEEE-ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC-CEEEE-
T ss_pred ------EEeeCCCcEEEEe-CCCCCCc---eeeeE-ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC-cEEEE-
Confidence 9999999999999 5432211 11122 3788899999999 78899998 9999999999954 34333
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEcc
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFAR 351 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 351 (408)
+.+|...|.+++|+ + .++++|+.|+.|++||+++++.+ ..+.+| ...|.+++|
T Consensus 292 ------~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~~~~----~~~~~h------------~~~v~~~~~-- 344 (435)
T 1p22_A 292 ------LNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGACL----RVLEGH------------EELVRCIRF-- 344 (435)
T ss_dssp ------EECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCCEE----EEECCC------------SSCEEEEEC--
T ss_pred ------EcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCCCEE----EEEeCC------------cCcEEEEEe--
Confidence 56788999999994 5 78999999999999999988654 555555 478999999
Q ss_pred CCCEEEEeC-CCeEEEEECCCCCC---------ceeeeeecccccceEEe
Q 015363 352 NGRHILSRD-YMTLKLWDINMDSG---------PVATFQVHEHLRPKVMH 391 (408)
Q Consensus 352 dg~~l~s~~-d~~v~~wd~~~~~~---------~~~~~~~~~~~~~~~~~ 391 (408)
++.+|++|+ ||.|++||+.+ +. ++..+.+|......+..
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 393 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVA-ALDPRAPAGTLCLRTLVEHSGRVFRLQF 393 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHH-HTSTTSCTTTTEEEEECCCSSCCCCEEE
T ss_pred cCCEEEEEeCCCcEEEEECCC-CCCccccccchheeeccCCCCCeEEEEe
Confidence 788999985 79999999976 34 78889999888777654
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6e-30 Score=233.98 Aligned_cols=273 Identities=8% Similarity=0.085 Sum_probs=194.2
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc--
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL-- 109 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~-- 109 (408)
..|.+.|++++|+|++++|++|+.||.|++||+..... +. ....+.+|. +..+
T Consensus 108 ~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-~~-------------------~~~~~~~~~-----i~~~~~ 162 (437)
T 3gre_A 108 YDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQ-ES-------------------EVKFLNCEC-----IRKINL 162 (437)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEE-TT-------------------EEEEEEEEE-----EEEEEG
T ss_pred ccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccC-Cc-------------------eeeccccce-----eEEEEc
Confidence 46899999999999999999999999999999852210 00 111111111 0000
Q ss_pred -c--cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 110 -E--IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 110 -~--~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
. ....+.++.+...+++.+|++++.|+.|++||+++++....+....+ .+.+. +++|+|++..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h------~~~v~-------~~~~s~~~~~l 229 (437)
T 3gre_A 163 KNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR------HGAVS-------SICIDEECCVL 229 (437)
T ss_dssp GGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG------GCCEE-------EEEECTTSCEE
T ss_pred cCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC------CCceE-------EEEECCCCCEE
Confidence 0 22668888877677789999999999999999999988877765311 22344 78999999988
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeC----CCCCEEEEe-cCCeEEEEeC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNN----SDGETFISA-DDLRINLWNL 261 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~----~~~~~l~~~-~d~~i~iwd~ 261 (408)
++++.|+.|++|| +.. ..+...+...|...|++++|+ |++.+|+++ .|+.|++||+
T Consensus 230 ------------~s~~~dg~i~iwd-~~~------~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 230 ------------ILGTTRGIIDIWD-IRF------NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp ------------EEEETTSCEEEEE-TTT------TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred ------------EEEcCCCeEEEEE-cCC------ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 9999999999999 433 334444323677889999555 567799999 8999999999
Q ss_pred CCCCceeeEeecC----------C-------CcccC--CcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccc
Q 015363 262 EISNQSFNIVDVK----------P-------ANMED--LTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHS 322 (408)
Q Consensus 262 ~~~~~~~~~~~~~----------~-------~~~~~--~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 322 (408)
++. .....+... + ..+.+ |...|++++|+ ++ .+|++|+.|+.|++||+++++..
T Consensus 291 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~~~~~---- 363 (437)
T 3gre_A 291 VKG-HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMFSLNELSSS---- 363 (437)
T ss_dssp TTT-EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETTCGGGC----
T ss_pred CCC-cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECCCcccc----
Confidence 844 433333211 0 01223 77889999999 77 89999999999999999988644
Q ss_pred cccccccCC-------------------------CCccccccccceeEEEEEccC--CCEEEEeC-CCeEEEEE
Q 015363 323 KLFEEQEAP-------------------------GTRSFFTEIIASISDIKFARN--GRHILSRD-YMTLKLWD 368 (408)
Q Consensus 323 ~~~~~~~~~-------------------------~~~~~~~~h~~~i~~~~~spd--g~~l~s~~-d~~v~~wd 368 (408)
..+.+|... .....+..|...|.+++|+++ +.+|++|+ ||.|++|+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 364 KAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 444443110 011223348899999999998 77999985 69999995
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=4.9e-29 Score=217.87 Aligned_cols=244 Identities=14% Similarity=0.194 Sum_probs=186.9
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|...|++++|+|++++||+|+.||+|+||++.+++ .+..+.+|.
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~-----------------------~~~~~~~h~----------- 109 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-----------------------RLRNMTSHS----------- 109 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----------------------EEEEEECCS-----------
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce-----------------------eEEEecCcc-----------
Confidence 3688899999999999999999999999999998765 356778888
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE-EEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV-KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..+.++.+ . +..+++++.++.+++|+...... ......+.. .+. .+.+.++++.+
T Consensus 110 -~~~~~~~~--~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-------~~~~~~~~~~l---- 165 (318)
T 4ggc_A 110 -ARVGSLSW--N--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--------EVC-------GLRWAPDGRHL---- 165 (318)
T ss_dssp -SCEEEEEE--E--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--------CEE-------EEEECTTSSEE----
T ss_pred -ceEEEeec--C--CCEEEEEecCCceEeeecCCCceeEEEEcCccC--------ceE-------EEEEcCCCCEE----
Confidence 55666655 4 45999999999999999987643 333333322 233 57889999987
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEE---Ee-cCCeEEEEeCCCCCc
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFI---SA-DDLRINLWNLEISNQ 266 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~---~~-~d~~i~iwd~~~~~~ 266 (408)
++++.|+.|++|| +...+... ..... ...+...|.+++++|++..++ ++ .++.|++||.+....
T Consensus 166 --------~s~~~d~~i~iwd-~~~~~~~~--~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~ 233 (318)
T 4ggc_A 166 --------ASGGNDNLVNVWP-SAPGEGGW--VPLQT-FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC 233 (318)
T ss_dssp --------EEEETTSCEEEEE-SSCBTTBS--CCSEE-ECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE
T ss_pred --------EEEecCcceeEEE-CCCCcccc--cceee-ecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc
Confidence 9999999999999 54322211 11122 256778899999999875433 45 789999999985443
Q ss_pred eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe--CCCeEEEEEcCCCceecccccccccccCCCCcccccccccee
Q 015363 267 SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS--SKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI 344 (408)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 344 (408)
... ..+...+..+.|+|++ ..+++++ .|+.|++||+++++.+ ..+.+| .+.|
T Consensus 234 ~~~---------~~~~~~v~~~~~~~~~-~~~~~~sg~~d~~i~iwd~~~~~~~----~~l~gH------------~~~V 287 (318)
T 4ggc_A 234 LSA---------VDAHSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMAKV----AELKGH------------TSRV 287 (318)
T ss_dssp EEE---------EECSSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCCEE----EEECCC------------SSCE
T ss_pred ccc---------ccceeeeeeeeecccc-cceEEEEEcCCCEEEEEECCCCcEE----EEEcCC------------CCCE
Confidence 322 3356778999999999 6665544 7999999999998665 666666 5789
Q ss_pred EEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 345 SDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 345 ~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
++++|+|||++|++|+ |++|+|||+..
T Consensus 288 ~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 288 LSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 9999999999999985 79999999975
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.2e-30 Score=234.87 Aligned_cols=258 Identities=14% Similarity=0.067 Sum_probs=169.0
Q ss_pred eEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeE
Q 015363 38 ISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK 117 (408)
Q Consensus 38 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~ 117 (408)
+....+++++.+||+|+.|++|+|||..++... ....+..+.+|. +.|++
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~------------------~~~~~~~~~gH~------------~~v~~ 141 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETII------------------TQHVLGGKSGHH------------NFVND 141 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEE------------------EEEEECTTTSCS------------SCEEE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCccc------------------eeeeecccCCCC------------CceEE
Confidence 333444456678999999999999999877531 122345678898 77999
Q ss_pred EEEeec------CCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCC-eeeccc
Q 015363 118 IRWCQS------ANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG-CGERNF 190 (408)
Q Consensus 118 v~~~p~------~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~l~~~~ 190 (408)
++|+|. .++++||+++.|++|+|||+.++........+. ..+. +++|+|++. .+
T Consensus 142 v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~--------~~v~-------~v~~~p~~~~~l---- 202 (393)
T 4gq1_A 142 IDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS--------SPGI-------SVQFRPSNPNQL---- 202 (393)
T ss_dssp EEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS--------SCEE-------EEEEETTEEEEE----
T ss_pred EEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC--------CCcE-------EEEECCCCCceE----
Confidence 999972 257899999999999999998776555443332 2344 789999886 45
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccc------------------cceeeccccccceEEEEeC-CCCCEEEEe
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAG------------------CRRIYAHAHDYHINSISNN-SDGETFISA 251 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~v~~i~~~-~~~~~l~~~ 251 (408)
++++.|+.|++|| +.......... .......+|...+.++.|+ |+++.++++
T Consensus 203 --------~~~~~d~~v~~wd-~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~ 273 (393)
T 4gq1_A 203 --------IVGERNGNIRIFD-WTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM 273 (393)
T ss_dssp --------EEEETTSEEEEEE-TTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE
T ss_pred --------EecCCCCEEEEEE-CCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEE
Confidence 8999999999999 54322110000 0001124677888899986 899999999
Q ss_pred -cCCeEEEEeCCCCCceeeEee---------cCC--CcccCCcCCeEEEEEcC-CCCceEEEEeCCCeEEEEEcCCCcee
Q 015363 252 -DDLRINLWNLEISNQSFNIVD---------VKP--ANMEDLTEVITSAEFHP-THCNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 252 -~d~~i~iwd~~~~~~~~~~~~---------~~~--~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
.|+++++||+........+.. ..+ .....+...+ ...|+| .+..++++|+.||.|++||+.++...
T Consensus 274 s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 274 CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL-GACPHPRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp CTTSEEEEEEC-------------------CCSCSEEEECSSCCSS-CCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred eCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce-eEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 999999999985432221100 000 0001111112 223333 33256778888999999999988543
Q ss_pred cccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECC
Q 015363 319 DTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDIN 370 (408)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~ 370 (408)
..+..| ...|.+++|+|||++||+++++.+.+|.+.
T Consensus 353 ----~~~~~~------------~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 353 ----SIPIQL------------GMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp ----EEEEEC------------SSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred ----EEecCC------------CCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 333444 468999999999999999988788888875
No 94
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.2e-29 Score=229.26 Aligned_cols=265 Identities=11% Similarity=0.118 Sum_probs=193.8
Q ss_pred eEEEEECCCCC-eEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccccee
Q 015363 38 ISAIEFDKSGD-HLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN 116 (408)
Q Consensus 38 V~~~~~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~ 116 (408)
...++++|+.. ++++|+.||.|+||++...... ......+.+|. ..|+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~-------------------~~~~~~~~~h~------------~~V~ 85 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV-------------------DKNVPLVCGHT------------APVL 85 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC-------------------CTTCCCBCCCS------------SCEE
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC-------------------CCCCceEecCC------------CCEE
Confidence 44688888865 4456889999999998654210 01234567888 7799
Q ss_pred EEEEeecCCCcEEEEEeCCCeEEEEEcCCCc-------EEEEeccCCCCcccCCCCCeEeecCCceeeEEccCC-Ceeec
Q 015363 117 KIRWCQSANSALYLLSTNDKTIKLWKVQEKK-------VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANG-GCGER 188 (408)
Q Consensus 117 ~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~l~~ 188 (408)
+++|+|. ++.+|++++.||+|++||+.++. ....+..+ .+.+. .++|+|++ ..+
T Consensus 86 ~~~~~p~-~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h--------~~~v~-------~~~~~p~~~~~l-- 147 (402)
T 2aq5_A 86 DIAWCPH-NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH--------TKRVG-------IVAWHPTAQNVL-- 147 (402)
T ss_dssp EEEECTT-CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC--------SSCEE-------EEEECSSBTTEE--
T ss_pred EEEeCCC-CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC--------CCeEE-------EEEECcCCCCEE--
Confidence 9999761 47799999999999999999873 33333333 22344 78999998 465
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeec-cccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCc
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYA-HAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQ 266 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~ 266 (408)
++++.|+.|++|| +.. ..+...+. ..|...|.+++|+|++++|+++ .|+.|++||+++. .
T Consensus 148 ----------~s~~~dg~i~iwd-~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~ 209 (402)
T 2aq5_A 148 ----------LSAGCDNVILVWD-VGT------GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG-T 209 (402)
T ss_dssp ----------EEEETTSCEEEEE-TTT------TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT-E
T ss_pred ----------EEEcCCCEEEEEE-CCC------CCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC-c
Confidence 8999999999999 543 22333322 5788999999999999999999 8999999999954 3
Q ss_pred eeeEeecCCCcc-cCCcCC-eEEEEEcCCCCceEEEE---eCCCeEEEEEcCCCceecccccccccccCCCCcccccccc
Q 015363 267 SFNIVDVKPANM-EDLTEV-ITSAEFHPTHCNMLAYS---SSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEII 341 (408)
Q Consensus 267 ~~~~~~~~~~~~-~~~~~~-v~~~~~~p~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 341 (408)
.... + ..|... +.++.|+|++ .+|++| +.|+.|++||++++... +..... .|.
T Consensus 210 ~~~~-------~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~~~~~---~~~~~~-----------~~~ 267 (402)
T 2aq5_A 210 VVAE-------KDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKHLEEP---LSLQEL-----------DTS 267 (402)
T ss_dssp EEEE-------EECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTBCSSC---SEEEEC-----------CCC
T ss_pred eeee-------eccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCccccCC---ceEEec-----------cCC
Confidence 3332 3 456655 8899999999 899998 78999999999987531 112111 123
Q ss_pred ceeEEEEEccCCCEEE-EeC-CCeEEEEECCCCCCceeeeeecc--cccceEEe
Q 015363 342 ASISDIKFARNGRHIL-SRD-YMTLKLWDINMDSGPVATFQVHE--HLRPKVMH 391 (408)
Q Consensus 342 ~~i~~~~~spdg~~l~-s~~-d~~v~~wd~~~~~~~~~~~~~~~--~~~~~~~~ 391 (408)
..|.+++|+|++++|+ +|+ |+.|++||+.+....+..+..|. .....+..
T Consensus 268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGY 321 (402)
T ss_dssp SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEE
T ss_pred CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEE
Confidence 6799999999999986 564 79999999997433366776664 44455543
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=249.29 Aligned_cols=167 Identities=12% Similarity=0.111 Sum_probs=124.7
Q ss_pred cccCCCCCceeeeceeeeccccccccccceeec-----cccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCce---
Q 015363 197 SSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYA-----HAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQS--- 267 (408)
Q Consensus 197 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~--- 267 (408)
++++++.|++|++|| +....... .......+ .+|...|++++|+|++++||+| .|++|++||+.+....
T Consensus 449 ~laSgs~DgtVrlWd-~~~g~~~~-~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~ 526 (902)
T 2oaj_A 449 AFITGHSNGSVRIYD-ASHGDIQD-NASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVE 526 (902)
T ss_dssp EEEEEETTSEEEEEE-SSCCTTTT-TBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC----
T ss_pred EEEEecCCCcEEEEE-CCCccccC-CceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCcc
Confidence 459999999999999 55432110 00000001 2788899999999999999999 9999999999854210
Q ss_pred --------------------------------------eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEE
Q 015363 268 --------------------------------------FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRL 309 (408)
Q Consensus 268 --------------------------------------~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 309 (408)
++.+ ..+.+|...|++++|+|+| +||+|+.|++|+|
T Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~l 600 (902)
T 2oaj_A 527 NRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPS----TAVHANKGKTSAINNSNIG--FVGIAYAAGSLML 600 (902)
T ss_dssp -----------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEE----EEECCCSCSEEEEEECBTS--EEEEEETTSEEEE
T ss_pred ccCCCcccceeeeeccccCCccccccccccCCCCCCCcccee----EEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEE
Confidence 0000 1257799999999999999 8999999999999
Q ss_pred EEcCCCceecc-cccccccccCCCCccccccccceeEEEEEc-----cCC---CEEEEeC-CCeEEEEEC---CCCCCce
Q 015363 310 IDMRQSALCDT-HSKLFEEQEAPGTRSFFTEIIASISDIKFA-----RNG---RHILSRD-YMTLKLWDI---NMDSGPV 376 (408)
Q Consensus 310 wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s-----pdg---~~l~s~~-d~~v~~wd~---~~~~~~~ 376 (408)
||+++...+.+ .+..+. .+|...|++++|+ ||| ++|++|+ |++|++||+ .+ |+.+
T Consensus 601 wd~~~~~~~~~~~~~~~~-----------~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~-g~~~ 668 (902)
T 2oaj_A 601 IDRRGPAIIYMENIREIS-----------GAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASG-GKFD 668 (902)
T ss_dssp EETTTTEEEEEEEGGGTC-----------SSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGG-GCEE
T ss_pred EECCCCeEEEEeehhHhc-----------cccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCC-CcEE
Confidence 99987754311 011221 2567899999999 885 8999985 799999999 65 7888
Q ss_pred eeeeecc
Q 015363 377 ATFQVHE 383 (408)
Q Consensus 377 ~~~~~~~ 383 (408)
..+.+|.
T Consensus 669 ~~~~~~~ 675 (902)
T 2oaj_A 669 VQLMDIT 675 (902)
T ss_dssp EEEEEEE
T ss_pred EEecCce
Confidence 9998886
No 96
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=229.39 Aligned_cols=268 Identities=9% Similarity=0.039 Sum_probs=184.9
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccc---cccCCCccceeeeeccCCcccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDY---SMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
-..+|.+++|+|||+++||++.|++|+ |...... ++.... .++++|+... ..+.--..+-..+.++.
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~-------l~gh~~~v~~V~FsPdg~~-~~~~~~~~~~~~~~~~~ 83 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD-------INCNSKNLFHVKEFPLEFE-NKLDFELAQQNGLLNSQ 83 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC-------CSSBGGGTEEEEEECCCCC-CTTTTSCCCSSCSSTTS
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccce-------ecCCCccEEEEEECCCCCc-ceEEEEeCCCceEeecC
Confidence 357899999999999999999999999 6544432 211111 4555665521 11111101101112223
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
++..|.+++|+|+ |.+||+++.||+|++||.++ +...+. +.. ..+...+. +++|+|+|+.+
T Consensus 84 ~~~~V~~vawSPd--G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~---~~~~~sv~-------svafSPDG~~L---- 144 (588)
T 2j04_A 84 PVCYPRVCKPSPI--DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKG---NLSSRTYH-------CFEWNPIESSI---- 144 (588)
T ss_dssp CSCCEEEEEECSS--SSCEEEEETTSCEEEEETTE--EEEECC-CSS---CSTTTCEE-------EEEECSSSSCE----
T ss_pred CCCcEEEEEECCC--CCEEEEEeCCCcEEEEeCCc--eeeecc-CCC---ccccccEE-------EEEEcCCCCEE----
Confidence 3588999999765 88999999999999999654 333333 221 11122344 79999999998
Q ss_pred ccccCccccCCCCCceeeeceeeecccccccc-ccceee---ccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCC
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVA-GCRRIY---AHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.||.|++|+ +......... -....+ ..+|...|.+++|+|+| ++++ .|++|++||+....
T Consensus 145 --------Asgs~DGtVkIWd-~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 145 --------VVGNEDGELQFFS-IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp --------EEEETTSEEEEEE-CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred --------EEEcCCCEEEEEE-CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 9999999999999 5542210000 011222 26688899999999999 5555 99999999998544
Q ss_pred ce--eeEeecCCCcc-cCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccc-cccCCCCcccccccc
Q 015363 266 QS--FNIVDVKPANM-EDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFE-EQEAPGTRSFFTEII 341 (408)
Q Consensus 266 ~~--~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~ 341 (408)
.. ... + .+|...|.+++|+ + +.||+++ +++|++||+.++... .+. +| .
T Consensus 214 ~~~~~~t-------L~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~~~~-----~~~~gh------------~ 265 (588)
T 2j04_A 214 HQPVSRM-------IQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNYSIS-----SLKTGS------------L 265 (588)
T ss_dssp SCCCEEE-------EECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTTEEE-----EEECSC------------C
T ss_pred cccceee-------ecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCCeEE-----EEEcCC------------C
Confidence 21 111 3 4678899999999 6 7888887 699999999987542 221 34 5
Q ss_pred ceeEEEEE--ccCCCEEEEeC-CCeEEEEECC
Q 015363 342 ASISDIKF--ARNGRHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 342 ~~i~~~~~--spdg~~l~s~~-d~~v~~wd~~ 370 (408)
+.|.+++| +||+..|++++ +|+ ++|..+
T Consensus 266 ~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 266 ENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred ceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 78999999 99999999996 688 999874
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.1e-28 Score=235.31 Aligned_cols=272 Identities=14% Similarity=0.182 Sum_probs=209.3
Q ss_pred cceeeccc-eEEEEECC--CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccc
Q 015363 30 EEVQEVDI-ISAIEFDK--SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYL 106 (408)
Q Consensus 30 ~~~~h~~~-V~~~~~s~--~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~ 106 (408)
...+|.+. |++++|+| ++++||+|+.||.|+||++.++... ..+..+....+..|.
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~---------------~~~~~~~~~~~~~~~------ 116 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKES---------------NSVEVNVKSEFQVLA------ 116 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGG---------------TEEEEEEEEEEECCS------
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccc---------------ccccccccchhhccc------
Confidence 34569999 99999999 9999999999999999998644100 000122455677777
Q ss_pred cccccccceeEEEEeecCCCcEEEEEeCC----CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccC
Q 015363 107 KSLEIEEKINKIRWCQSANSALYLLSTND----KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN 182 (408)
Q Consensus 107 ~~~~~~~~v~~v~~~p~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 182 (408)
..|.+++|+|+ +.+|++++.+ +.|++|| .++....+..+ .+.+. ++.|+|+
T Consensus 117 ------~~v~~~~~s~~--~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~--------~~~v~-------~~~~~~~ 171 (615)
T 1pgu_A 117 ------GPISDISWDFE--GRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGH--------SQRIN-------ACHLKQS 171 (615)
T ss_dssp ------SCEEEEEECTT--SSEEEEEECCSSCSEEEEETT--TCCEEEECCSC--------SSCEE-------EEEECSS
T ss_pred ------ccEEEEEEeCC--CCEEEEeccCCCCccEEEEEE--CCCcceeeecC--------CccEE-------EEEECCC
Confidence 77999999754 8899999987 6888888 44445544443 22344 7899999
Q ss_pred CC-eeecccccccCccccCCCCCceeeeceeeeccccccccccceeecccccc---ceEEEEeCCC-CCEEEEe-cCCeE
Q 015363 183 GG-CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDY---HINSISNNSD-GETFISA-DDLRI 256 (408)
Q Consensus 183 ~~-~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~i~~~~~-~~~l~~~-~d~~i 256 (408)
+. .+ ++++.++.|++|| +.. .++...+ ..|.. .|++++|+|+ +++|+++ .|+.|
T Consensus 172 ~~~~l------------~~~~~d~~v~vwd-~~~------~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 172 RPMRS------------MTVGDDGSVVFYQ-GPP------FKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp SSCEE------------EEEETTTEEEEEE-TTT------BEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred CCcEE------------EEEeCCCcEEEEe-CCC------cceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 98 45 8999999999999 432 2333443 67888 8999999999 9999998 89999
Q ss_pred EEEeCCCCCceeeEeecCCCcc-c---CCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCC
Q 015363 257 NLWNLEISNQSFNIVDVKPANM-E---DLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPG 332 (408)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 332 (408)
++||+++.. .... + . .|...|.+++|+ ++ .+|++++.|+.|++||+++++.. ..+..+.
T Consensus 232 ~vwd~~~~~-~~~~-------~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~~~~----~~~~~~~--- 294 (615)
T 1pgu_A 232 SCFDGKSGE-FLKY-------IEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVWDVTTSKCV----QKWTLDK--- 294 (615)
T ss_dssp EEEETTTCC-EEEE-------CCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEEETTTTEEE----EEEECCT---
T ss_pred EEEECCCCC-EeEE-------ecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEEECCCCcEE----EEEcCCC---
Confidence 999998544 3332 3 4 789999999999 88 99999999999999999988654 4444431
Q ss_pred CccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEe
Q 015363 333 TRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMH 391 (408)
Q Consensus 333 ~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~ 391 (408)
..+...+.++.|+ ++.+|++++ |+.|++||+.+ ++++..+.+|......+..
T Consensus 295 -----~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~v~~~~~ 347 (615)
T 1pgu_A 295 -----QQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH-DEVLKTISGHNKGITALTV 347 (615)
T ss_dssp -----TCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE-EEEEEEECCCSSCEEEEET
T ss_pred -----CcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC-CcEEEEEeCCCCCEEEEEe
Confidence 1123568888886 888888885 79999999997 7889999998887666654
No 98
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=8.4e-30 Score=232.62 Aligned_cols=214 Identities=14% Similarity=0.199 Sum_probs=165.1
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCeeecccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~~~~~ 191 (408)
..|++|+|+|. ++.+||+|+.||+|+|||+.+++.........+ .+.|. +++|+| ++..+
T Consensus 120 ~~V~~l~~~P~-~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH------~~~V~-------~l~f~p~~~~~l----- 180 (435)
T 4e54_B 120 RRATSLAWHPT-HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA------GGSIT-------GLKFNPLNTNQF----- 180 (435)
T ss_dssp SCEEEEEECSS-CTTCEEEEETTSCEEEECSSCCSCCEEECCCSS------SCCCC-------EEEECSSCTTEE-----
T ss_pred CCEEEEEEeCC-CCCEEEEEeCCCEEEEEECCCCCceeEEEccCC------CCCEE-------EEEEeCCCCCEE-----
Confidence 77999999875 345899999999999999988766555544332 23344 789998 57776
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceeec--cccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYA--HAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
++++.|+.|++|| +... ....+. ..+...+.+++|+|++.+|++| .|+.|++||++ .+...
T Consensus 181 -------~s~s~D~~v~iwd-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~ 244 (435)
T 4e54_B 181 -------YASSMEGTTRLQD-FKGN-------ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELW 244 (435)
T ss_dssp -------EEECSSSCEEEEE-TTSC-------EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCC
T ss_pred -------EEEeCCCEEEEee-ccCC-------ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeE
Confidence 9999999999999 5321 111111 2334567899999999999999 99999999997 33322
Q ss_pred eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEE
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIK 348 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 348 (408)
.+.+|...|++++|+|++..+|++|+.|+.|++||+++.+.. ..+.. ..+|...|.+++
T Consensus 245 --------~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~-~~~~~------------~~~h~~~v~~~~ 303 (435)
T 4e54_B 245 --------NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK-ASFLY------------SLPHRHPVNAAC 303 (435)
T ss_dssp --------CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS-SCCSB------------CCBCSSCEEECC
T ss_pred --------EEecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc-ceEEE------------eeecccccccee
Confidence 367899999999999998668999999999999999887532 11111 234568899999
Q ss_pred EccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecc
Q 015363 349 FARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 349 ~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
|+|+|++|++++ |+.|++||+.+ +.....+..|.
T Consensus 304 ~spdg~~l~s~~~D~~i~iwd~~~-~~~~~~~~~~~ 338 (435)
T 4e54_B 304 FSPDGARLLTTDQKSEIRVYSASQ-WDCPLGLIPHP 338 (435)
T ss_dssp BCTTSSEEEEEESSSCEEEEESSS-SSSEEEECCCC
T ss_pred ECCCCCeeEEEcCCCEEEEEECCC-CccceEEeccc
Confidence 999999999985 79999999997 67776666654
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.3e-29 Score=219.61 Aligned_cols=235 Identities=9% Similarity=0.029 Sum_probs=170.2
Q ss_pred EECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEEe
Q 015363 42 EFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWC 121 (408)
Q Consensus 42 ~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~ 121 (408)
.+.+++.+|++|+.||+|++||+.+++. +..+. . ..|.++.|+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~-----------------------~~~~~--~------------~~v~~~~~~ 85 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKT-----------------------ITTIT--T------------PNPRTGGEH 85 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSC-----------------------EEEEE--E------------ECCCTTCCC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcE-----------------------EEEEe--c------------CCceeeeeC
Confidence 4456788999999999999999987753 12222 1 558888886
Q ss_pred ecCCCcEEEEEeCCCeEEEEEcCC---------CcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc--CCCeeeccc
Q 015363 122 QSANSALYLLSTNDKTIKLWKVQE---------KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA--NGGCGERNF 190 (408)
Q Consensus 122 p~~~~~~l~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~l~~~~ 190 (408)
|. +++++.|++|++|+... ++......... .+.+. .+.++| +++.+
T Consensus 86 ~~-----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~-------~~~~~~~~~~~~l---- 142 (343)
T 3lrv_A 86 PA-----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS-------ANEII-------YMYGHNEVNTEYF---- 142 (343)
T ss_dssp CS-----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC-------SSCEE-------EEECCC---CCEE----
T ss_pred Cc-----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC-------CCCEE-------EEEcCCCCCCCEE----
Confidence 54 99999999999998764 22222222110 22344 789999 89887
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++++.|+.|++|| +... .+.......+...+++++|+|++.+|++| .|+.|++||+++......
T Consensus 143 --------~s~s~dg~i~~wd-~~~~------~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 143 --------IWADNRGTIGFQS-YEDD------SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASS 207 (343)
T ss_dssp --------EEEETTCCEEEEE-SSSS------CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCE
T ss_pred --------EEEeCCCcEEEEE-CCCC------cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCcc
Confidence 9999999999999 5432 22222223455679999999999999998 999999999996554423
Q ss_pred EeecCCCcccC-CcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccccccee--EE
Q 015363 270 IVDVKPANMED-LTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI--SD 346 (408)
Q Consensus 270 ~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i--~~ 346 (408)
. +.. |...|++++|+|++ .+|++++ |+.|++||+++++.. ..+..+. .|...+ .+
T Consensus 208 ~-------~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~~~~~----~~~~~~~---------~~~~~~~~~~ 265 (343)
T 3lrv_A 208 R-------FPVDEEAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRKDVGT----LAYPTYT---------IPEFKTGTVT 265 (343)
T ss_dssp E-------CCCCTTSCEEEEEECTTS-SEEEEEE-SSBEEEEETTSSTTC----BSSCCCB---------C-----CCEE
T ss_pred E-------EeccCCCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCCCCcc----eeecccc---------cccccccceE
Confidence 2 455 89999999999999 9999999 559999999987543 2222210 111223 46
Q ss_pred EEEccCCCEEEEe-C-CCeEEEEECCCCC
Q 015363 347 IKFARNGRHILSR-D-YMTLKLWDINMDS 373 (408)
Q Consensus 347 ~~~spdg~~l~s~-~-d~~v~~wd~~~~~ 373 (408)
++|+|+|++|+++ . |+.|++|++....
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 9999999999996 4 7999999997643
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.5e-28 Score=242.08 Aligned_cols=245 Identities=16% Similarity=0.216 Sum_probs=199.2
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
...|.++|++++|+|++++||+|+.||.|+||++.+++ ....+.+|.
T Consensus 51 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-----------------------~~~~~~~~~---------- 97 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE-----------------------KVVDFEAHP---------- 97 (814)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC-----------------------EEEEEECCS----------
T ss_pred EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-----------------------EEEEEecCC----------
Confidence 34689999999999999999999999999999988765 345677888
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC-cEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCeeec
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEK-KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGCGER 188 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~~ 188 (408)
..|++++|+|+ +.+|++++.||.|++||+.++ .....+..+. +.+. +++|+| ++..+
T Consensus 98 --~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--------~~v~-------~~~~~p~~~~~l-- 156 (814)
T 3mkq_A 98 --DYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNWALEQTFEGHE--------HFVM-------CVAFNPKDPSTF-- 156 (814)
T ss_dssp --SCEEEEEECSS--SSEEEEEETTSEEEEEEGGGTSEEEEEEECCS--------SCEE-------EEEEETTEEEEE--
T ss_pred --CCEEEEEEeCC--CCEEEEEcCCCEEEEEECCCCceEEEEEcCCC--------CcEE-------EEEEEcCCCCEE--
Confidence 77999999765 789999999999999999986 5555554442 2344 789999 77777
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC--CCCEEEEe-cCCeEEEEeCCCCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS--DGETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
++++.++.|++|| +.. ......+...+...+.+++|+| ++.+|+++ .|+.|++||+++ .
T Consensus 157 ----------~~~~~dg~v~vwd-~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~ 218 (814)
T 3mkq_A 157 ----------ASGCLDRTVKVWS-LGQ------STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-K 218 (814)
T ss_dssp ----------EEEETTSEEEEEE-TTC------SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-T
T ss_pred ----------EEEeCCCeEEEEE-CCC------CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC-C
Confidence 9999999999999 433 2222333244557899999999 99999999 899999999984 4
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
..... +.+|...|.+++|+|++ .+|++++.||.|++||+.+++.. ..+..+ ...|.
T Consensus 219 ~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~----~~~~~~------------~~~v~ 274 (814)
T 3mkq_A 219 SCVAT-------LEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYKVE----KTLNVG------------LERSW 274 (814)
T ss_dssp EEEEE-------EECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCSEE----EEECCS------------SSSEE
T ss_pred cEEEE-------EcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEE----EEeecC------------CCcEE
Confidence 44433 56788999999999999 89999999999999999988654 445444 36899
Q ss_pred EEEEccCCC--EEEEeCCCeEEEEECCC
Q 015363 346 DIKFARNGR--HILSRDYMTLKLWDINM 371 (408)
Q Consensus 346 ~~~~spdg~--~l~s~~d~~v~~wd~~~ 371 (408)
+++|+|++. +++++.++.+.+|++..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 275 CIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred EEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 999999987 67788888999999876
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.3e-27 Score=219.05 Aligned_cols=261 Identities=12% Similarity=0.248 Sum_probs=184.2
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
.+|.+.|++++|+ +++|++|+.||+|++||+.+++ ....+.+|.
T Consensus 156 ~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~-----------------------~~~~~~~h~----------- 199 (445)
T 2ovr_B 156 VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE-----------------------CIHTLYGHT----------- 199 (445)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE-----------------------EEEEECCCS-----------
T ss_pred cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc-----------------------EEEEECCCC-----------
Confidence 3566777777775 4567777777777777765543 234566666
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
..|.++.|. +..+++++.|++|++||+.+++....+..+.. .+. ++.+ ++..+
T Consensus 200 -~~v~~~~~~----~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~--------~v~-------~~~~--~~~~l----- 252 (445)
T 2ovr_B 200 -STVRCMHLH----EKRVVSGSRDATLRVWDIETGQCLHVLMGHVA--------AVR-------CVQY--DGRRV----- 252 (445)
T ss_dssp -SCEEEEEEE----TTEEEEEETTSEEEEEESSSCCEEEEEECCSS--------CEE-------EEEE--CSSCE-----
T ss_pred -CcEEEEEec----CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc--------cEE-------EEEE--CCCEE-----
Confidence 567777773 34677777778888888777776665554322 222 3344 55555
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeE
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNI 270 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~ 270 (408)
++++.|+.|++|| +.. ..+...+ .+|...|.+++| ++..++++ .|+.|++||+++.. ....
T Consensus 253 -------~~~~~dg~i~iwd-~~~------~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~-~~~~ 314 (445)
T 2ovr_B 253 -------VSGAYDFMVKVWD-PET------ETCLHTL-QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN-CIHT 314 (445)
T ss_dssp -------EEEETTSCEEEEE-GGG------TEEEEEE-CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC-EEEE
T ss_pred -------EEEcCCCEEEEEE-CCC------CcEeEEe-cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC-EEEE
Confidence 9999999999999 433 3344444 688899999999 78899998 89999999999544 4333
Q ss_pred eecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEc
Q 015363 271 VDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFA 350 (408)
Q Consensus 271 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 350 (408)
+.+|...+.++.++ + .+|++|+.||.|++||+++++.. ..+..+ ..|...|.+++|+
T Consensus 315 -------~~~~~~~v~~~~~~--~-~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~---------~~~~~~v~~~~~~ 371 (445)
T 2ovr_B 315 -------LTGHQSLTSGMELK--D-NILVSGNADSTVKIWDIKTGQCL----QTLQGP---------NKHQSAVTCLQFN 371 (445)
T ss_dssp -------ECCCCSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCCEE----EEECST---------TSCSSCEEEEEEC
T ss_pred -------EcCCcccEEEEEEe--C-CEEEEEeCCCeEEEEECCCCcEE----EEEccC---------CCCCCCEEEEEEC
Confidence 56788888888874 5 68999999999999999988654 445442 2245789999996
Q ss_pred cCCCEEEEeC-CCeEEEEECCCCCCceeee-----eecccccceEEecCCCeeee
Q 015363 351 RNGRHILSRD-YMTLKLWDINMDSGPVATF-----QVHEHLRPKVMHSSKNYFMG 399 (408)
Q Consensus 351 pdg~~l~s~~-d~~v~~wd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 399 (408)
+++|++|+ ||.|++||+.+ ++.++.+ .+|.+....+....++..++
T Consensus 372 --~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la 423 (445)
T 2ovr_B 372 --KNFVITSSDDGTVKLWDLKT-GEFIRNLVTLESGGSGGVVWRIRASNTKLVCA 423 (445)
T ss_dssp --SSEEEEEETTSEEEEEETTT-CCEEEEEEECTTGGGTCEEEEEEECSSEEEEE
T ss_pred --CCEEEEEeCCCeEEEEECCC-CceeeeeeccccCCCCceEEEEEecCCEEEEE
Confidence 57898885 79999999998 7888888 35555555555433444433
No 102
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=1.1e-28 Score=215.36 Aligned_cols=225 Identities=14% Similarity=0.133 Sum_probs=162.3
Q ss_pred ceeeccceEEEEECC--CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 31 EVQEVDIISAIEFDK--SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~--~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
..+|.+.|++++|+| ++++||+|+.|++|+|||+.++.. .....+.+|.
T Consensus 53 l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~---------------------~~~~~~~~h~-------- 103 (316)
T 3bg1_A 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW---------------------EKSHEHAGHD-------- 103 (316)
T ss_dssp EECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC---------------------CEEEEECCCS--------
T ss_pred EcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc---------------------eEEEEccCCC--------
Confidence 457999999999986 489999999999999999876532 1344677888
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEE-EeccCCCCcccCCCCCeEeecCCceeeEEccCCCe--
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKK-VFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC-- 185 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-- 185 (408)
..|++++|+|+.++.+|++++.|++|++||+..+.... ......+ ...+. .+.|+|++..
T Consensus 104 ----~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h------~~~v~-------~~~~~~~~~~~~ 166 (316)
T 3bg1_A 104 ----SSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH------TIGCN-------AVSWAPAVVPGS 166 (316)
T ss_dssp ----SCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS------SSCBC-------CCEECCCCCC--
T ss_pred ----CceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc------cCCcc-------eEEEccccCCcc
Confidence 77999999887667899999999999999998763221 1111111 11222 5677776321
Q ss_pred -eecccccc--cCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC----CEEEEe-cCCeEE
Q 015363 186 -GERNFGCA--SNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG----ETFISA-DDLRIN 257 (408)
Q Consensus 186 -l~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~----~~l~~~-~d~~i~ 257 (408)
+....+.. ...++++++.|+.|++|| +..... ..+... +.+|...|++++|+|++ .+|+++ .|++|+
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd-~~~~~~---~~~~~~-l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWK-EEEDGQ---WKEEQK-LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEE-ECTTSC---EEEEEC-CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEE-eCCCCc---cceeee-cccCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 00000000 113469999999999999 532110 122333 37899999999999986 789998 999999
Q ss_pred EEeCCCCCc---eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCC
Q 015363 258 LWNLEISNQ---SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQ 314 (408)
Q Consensus 258 iwd~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 314 (408)
+||++.... .... +..|...|.+++|+|++ .+||+++.|++|++|+...
T Consensus 242 iw~~~~~~~~~~~~~~-------~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 242 IWTCDDASSNTWSPKL-------LHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEECSSTTCCCCBCCE-------EEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEECT
T ss_pred EEEccCccccchhhhh-------hhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEECC
Confidence 999985211 1111 34578899999999999 9999999999999999763
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=4.3e-29 Score=220.62 Aligned_cols=263 Identities=13% Similarity=0.081 Sum_probs=192.0
Q ss_pred cccceeeecccCcCcccceeeccceEEEEECCCCC-eEEEeecCCeEEEEEe-CCCCCCCCcccccccccccccCCCccc
Q 015363 14 PLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGD-HLATGDRGGRVVLFER-TDTRDNGGQRRDLEMMDYSMSRHPEFR 91 (408)
Q Consensus 14 ~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~-~l~sg~~dg~i~iw~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~ 91 (408)
-..|++..............|...|++++|+|+++ +|++|+.||.|++|++ .++..
T Consensus 35 v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~---------------------- 92 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF---------------------- 92 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE----------------------
T ss_pred EEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce----------------------
Confidence 44577664211111234458999999999999999 9999999999999998 76542
Q ss_pred eeeeecc--CCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCC---------CcEEEEeccCCCCcc
Q 015363 92 YKTEFQS--HEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQE---------KKVKKVFDWNVHPEK 160 (408)
Q Consensus 92 ~~~~~~~--h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~~ 160 (408)
..+.+ |. ..|.+++|+| +.+|++++.|+.|++||+.+ ++....+.
T Consensus 93 --~~~~~~~~~------------~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------- 148 (342)
T 1yfq_A 93 --QALTNNEAN------------LGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK------- 148 (342)
T ss_dssp --EECBSCCCC------------SCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-------
T ss_pred --EeccccCCC------------CceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-------
Confidence 35666 77 7799999976 56999999999999999986 33222221
Q ss_pred cCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeec-cccccccccceeeccccccceEEE
Q 015363 161 AAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTS-QETNLVAGCRRIYAHAHDYHINSI 239 (408)
Q Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~i 239 (408)
..+.+. ++.|+|++ + ++++.++.|++|| +.. ... ........|...+.++
T Consensus 149 --~~~~v~-------~~~~~~~~--l------------~~~~~d~~i~i~d-~~~~~~~-----~~~~~~~~~~~~i~~i 199 (342)
T 1yfq_A 149 --VKNKIF-------TMDTNSSR--L------------IVGMNNSQVQWFR-LPLCEDD-----NGTIEESGLKYQIRDV 199 (342)
T ss_dssp --SCCCEE-------EEEECSSE--E------------EEEESTTEEEEEE-SSCCTTC-----CCEEEECSCSSCEEEE
T ss_pred --eCCceE-------EEEecCCc--E------------EEEeCCCeEEEEE-CCccccc-----cceeeecCCCCceeEE
Confidence 133344 68888877 5 8889999999999 543 211 1111235677889999
Q ss_pred EeCC-CCCEEEEe-cCCeEEEEeCCCC-----CceeeEeecCCC--cccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEE
Q 015363 240 SNNS-DGETFISA-DDLRINLWNLEIS-----NQSFNIVDVKPA--NMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLI 310 (408)
Q Consensus 240 ~~~~-~~~~l~~~-~d~~i~iwd~~~~-----~~~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 310 (408)
+|+| ++++++++ .|+.|++|+++.. ......+..... .-..|...|.+++|+|++ .+|++++.||.|++|
T Consensus 200 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vw 278 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCW 278 (342)
T ss_dssp EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEE
Confidence 9999 99999999 9999999999855 133333211000 001234489999999999 899999999999999
Q ss_pred EcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCe-EEEEEC
Q 015363 311 DMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMT-LKLWDI 369 (408)
Q Consensus 311 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~-v~~wd~ 369 (408)
|+++++.+ ..+.+| |...|.+++ |++++|++++ |+. .+.|..
T Consensus 279 d~~~~~~~----~~~~~~-----------h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 279 NLQTRKKI----KNFAKF-----------NEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp ETTTTEEE----EECCCC-----------SSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred cCccHhHh----hhhhcc-----------cCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 99988654 455544 147899999 9999999985 788 555553
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.1e-28 Score=226.22 Aligned_cols=283 Identities=13% Similarity=0.164 Sum_probs=184.4
Q ss_pred cceEEEEECCCC--CeEEEeecCCeEEEEEeCCCCCCCCcccccccccc-------cccCCCcc---------ceeee-e
Q 015363 36 DIISAIEFDKSG--DHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDY-------SMSRHPEF---------RYKTE-F 96 (408)
Q Consensus 36 ~~V~~~~~s~~~--~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-------~~~~~p~~---------~~~~~-~ 96 (408)
+.|++++|+|++ .+|++|+.||.|+||++.++.............+. ....-|.. ..... .
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 889999999998 79999999999999998764321000000000000 00000000 00111 2
Q ss_pred ccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCC-CcEEEEeccCCCCcccCCCCCeEeecCCce
Q 015363 97 QSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQE-KKVKKVFDWNVHPEKAAGNGPIFGSHVSAI 175 (408)
Q Consensus 97 ~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (408)
.+|. ..|.+++|+|+ +.+|+++ .|+.|++||+.+ ++.......... ......+.+.
T Consensus 174 ~~h~------------~~v~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~v~------- 230 (447)
T 3dw8_B 174 NAHT------------YHINSISINSD--YETYLSA-DDLRINLWHLEITDRSFNIVDIKPA-NMEELTEVIT------- 230 (447)
T ss_dssp SCCS------------SCCCEEEECTT--SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCS-SGGGCCCCEE-------
T ss_pred cCCC------------cceEEEEEcCC--CCEEEEe-CCCeEEEEECCCCCceeeeeecccc-cccccCcceE-------
Confidence 4566 77999999764 8899998 899999999994 444443322110 0111133444
Q ss_pred eeEEccCC-CeeecccccccCccccCCCCCceeeeceeeeccccccccccceeecccccc------------ceEEEEeC
Q 015363 176 PKSYMANG-GCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDY------------HINSISNN 242 (408)
Q Consensus 176 ~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~i~~~ 242 (408)
+++|+|++ ..+ ++++.|+.|++|| +...... ......+ ..|.. .|.+++|+
T Consensus 231 ~~~~~p~~~~~l------------~s~~~dg~i~iwd-~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s 294 (447)
T 3dw8_B 231 AAEFHPNSCNTF------------VYSSSKGTIRLCD-MRASALC--DRHSKLF-EEPEDPSNRSFFSEIISSISDVKFS 294 (447)
T ss_dssp EEEECSSCTTEE------------EEEETTSCEEEEE-TTTCSSS--CTTCEEE-CCC-----CCHHHHHTTCEEEEEEC
T ss_pred EEEECCCCCcEE------------EEEeCCCeEEEEE-CcCCccc--cceeeEe-ccCCCccccccccccCceEEEEEEC
Confidence 78999998 776 9999999999999 5442210 0112222 44544 89999999
Q ss_pred CCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcccCCcCC---------------eEEEEEcCCCCceEEEEeCCCeE
Q 015363 243 SDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEV---------------ITSAEFHPTHCNMLAYSSSKGSI 307 (408)
Q Consensus 243 ~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~p~~~~~l~s~~~dg~i 307 (408)
|++++|+++.++.|++||++........ +..|... +..++|+|++ .+|++|+.||.|
T Consensus 295 ~~g~~l~~~~~~~v~iwd~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v 366 (447)
T 3dw8_B 295 HSGRYMMTRDYLSVKVWDLNMENRPVET-------YQVHEYLRSKLCSLYENDCIFDKFECCWNGSD-SVVMTGSYNNFF 366 (447)
T ss_dssp TTSSEEEEEESSEEEEEETTCCSSCSCC-------EESCGGGTTTHHHHHHTSGGGCCCCEEECTTS-SEEEEECSTTEE
T ss_pred CCCCEEEEeeCCeEEEEeCCCCccccce-------eeccccccccccccccccccccceEEEECCCC-CEEEEeccCCEE
Confidence 9999999993399999999853444433 3444321 3349999999 899999999999
Q ss_pred EEEEcCCCceecccccccccccCCCCc---------------------cccccccceeEEEEEccCCCEEEEeCCCeEEE
Q 015363 308 RLIDMRQSALCDTHSKLFEEQEAPGTR---------------------SFFTEIIASISDIKFARNGRHILSRDYMTLKL 366 (408)
Q Consensus 308 ~iwd~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~ 366 (408)
++||+.+++.. .+..+..+... .....+...|..++|+|++.+||+++.+.+++
T Consensus 367 ~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~ 441 (447)
T 3dw8_B 367 RMFDRNTKRDI-----TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYI 441 (447)
T ss_dssp EEEETTTCCEE-----EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEE
T ss_pred EEEEcCCCcce-----eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeee
Confidence 99999988653 22222111000 00112346789999999999999997767999
Q ss_pred EECC
Q 015363 367 WDIN 370 (408)
Q Consensus 367 wd~~ 370 (408)
|..+
T Consensus 442 ~~~~ 445 (447)
T 3dw8_B 442 FQDK 445 (447)
T ss_dssp EECC
T ss_pred eccc
Confidence 9764
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.2e-27 Score=219.27 Aligned_cols=243 Identities=15% Similarity=0.267 Sum_probs=191.6
Q ss_pred cceeeccce-EEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 30 EEVQEVDII-SAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 30 ~~~~h~~~V-~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
...+|.+.| +|+.+ +|++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 113 ~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~-----------------------~~~~~~~h~-------- 159 (445)
T 2ovr_B 113 VLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGK-----------------------CLRTLVGHT-------- 159 (445)
T ss_dssp EEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC-----------------------EEEECCCCS--------
T ss_pred EecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCc-----------------------EEEEEcCCC--------
Confidence 345788865 65554 68999999999999999988665 346778888
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..|.+++|+ +.++++++.||+|++||+.+++....+..+.. .+. ++.+ ++..+
T Consensus 160 ----~~v~~~~~~----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~--------~v~-------~~~~--~~~~l-- 212 (445)
T 2ovr_B 160 ----GGVWSSQMR----DNIIISGSTDRTLKVWNAETGECIHTLYGHTS--------TVR-------CMHL--HEKRV-- 212 (445)
T ss_dssp ----SCEEEEEEE----TTEEEEEETTSCEEEEETTTTEEEEEECCCSS--------CEE-------EEEE--ETTEE--
T ss_pred ----CCEEEEEec----CCEEEEEeCCCeEEEEECCcCcEEEEECCCCC--------cEE-------EEEe--cCCEE--
Confidence 779999995 45999999999999999999988777765433 233 3455 34555
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCce
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~ 267 (408)
++++.|+.|++|| +.. .++...+ .+|...|.++++ ++++++++ .|+.|++||+++. ..
T Consensus 213 ----------~s~s~dg~i~~wd-~~~------~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~-~~ 271 (445)
T 2ovr_B 213 ----------VSGSRDATLRVWD-IET------GQCLHVL-MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE-TC 271 (445)
T ss_dssp ----------EEEETTSEEEEEE-SSS------CCEEEEE-ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT-EE
T ss_pred ----------EEEeCCCEEEEEE-CCC------CcEEEEE-cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC-cE
Confidence 9999999999999 433 2333443 788899999999 67889988 9999999999844 44
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDI 347 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 347 (408)
... +.+|...|.+++| ++ .++++++.|+.|++||+++++.. ..+.+| ...+.++
T Consensus 272 ~~~-------~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~------------~~~v~~~ 325 (445)
T 2ovr_B 272 LHT-------LQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCI----HTLTGH------------QSLTSGM 325 (445)
T ss_dssp EEE-------ECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEE----EEECCC------------CSCEEEE
T ss_pred eEE-------ecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEE----EEEcCC------------cccEEEE
Confidence 433 5678899999999 67 88999999999999999998654 555555 4677777
Q ss_pred EEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec
Q 015363 348 KFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 348 ~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
.+ ++.+|++|+ |+.|++||+++ ++++..+.++
T Consensus 326 ~~--~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~ 358 (445)
T 2ovr_B 326 EL--KDNILVSGNADSTVKIWDIKT-GQCLQTLQGP 358 (445)
T ss_dssp EE--ETTEEEEEETTSCEEEEETTT-CCEEEEECST
T ss_pred EE--eCCEEEEEeCCCeEEEEECCC-CcEEEEEccC
Confidence 76 467888885 79999999997 7899999873
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.8e-28 Score=215.37 Aligned_cols=286 Identities=8% Similarity=0.073 Sum_probs=180.3
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|.+.|++++|+|||++||+|+.++ ++||+..+... ....+.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~-------------------------~~~~~~----------- 58 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAH-------------------------IMSQEM----------- 58 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEE-------------------------EEEEEC-----------
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcce-------------------------eeeeec-----------
Confidence 56899999999999999999998775 78999876542 111111
Q ss_pred ccceeEEEEeecCCCcEE-EEEeCCCeEEEEEcCCCcEEEEeccCCCCc--ccCCCCCeEeecCCceeeEEccCC-Ceee
Q 015363 112 EEKINKIRWCQSANSALY-LLSTNDKTIKLWKVQEKKVKKVFDWNVHPE--KAAGNGPIFGSHVSAIPKSYMANG-GCGE 187 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~-~~l~ 187 (408)
..+..+++.++ +..+ ++++.|++|++||+.+++....+..+.... .+.++ .+....+..+.++-..++ +.+.
T Consensus 59 -~~~~~~~~~~~--~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~~i~i~d~~~~~~~~~ 134 (355)
T 3vu4_A 59 -RHLSKVRMLHR--TNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSRE-FIVVSYGDVISVFKFGNPWKRIT 134 (355)
T ss_dssp -SCCCEEEECTT--SSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSS-EEEEEETTEEEEEESSTTCCBSS
T ss_pred -CCeEEEEEcCC--CCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCC-EEEEEEcCEEEEEECCCCceeeE
Confidence 23677788655 4455 567788999999999998877665432111 11111 111112222233322333 2222
Q ss_pred cccc------cccCccccC-CCCCceeeeceeeeccccc---------ccccc-ceeeccccccceEEEEeCCCCCEEEE
Q 015363 188 RNFG------CASNDSSFP-PGGVSSLRLPVVVTSQETN---------LVAGC-RRIYAHAHDYHINSISNNSDGETFIS 250 (408)
Q Consensus 188 ~~~~------~~~~~~~~~-~~~~~~i~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~~ 250 (408)
.+.. .....++++ ++.++.|++|| +...... ....+ ...+ .+|...|++++|+|++++|++
T Consensus 135 ~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd-~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 135 DDIRFGGVCEFSNGLLVYSNEFNLGQIHITK-LQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp CCEEEEEEEEEETTEEEEEESSCTTCEEEEE-CCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred EeccCCceEEEEccEEEEeCCCcCcEEEEEE-CCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEE
Confidence 2211 000122333 78999999999 5442200 00011 3443 899999999999999999999
Q ss_pred e-cCCe-EEEEeCCCCCceeeEeecCCCccc-C-CcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccc
Q 015363 251 A-DDLR-INLWNLEISNQSFNIVDVKPANME-D-LTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFE 326 (408)
Q Consensus 251 ~-~d~~-i~iwd~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 326 (408)
+ .|++ |++||+++.. .... +. + |...|++++|+|++ .+|++++.|++|++||++...... ...+.
T Consensus 213 ~s~d~~~v~iwd~~~~~-~~~~-------~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~~~~--~~~~~ 281 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGV-LVRE-------FRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQDNK--RHALK 281 (355)
T ss_dssp EETTCSEEEEEETTTCC-EEEE-------EECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCSCCC--SEETT
T ss_pred EeCCCCEEEEEECCCCc-EEEE-------EEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCCCcc--ccccc
Confidence 9 9998 9999999544 3333 33 4 88999999999999 999999999999999998763211 01111
Q ss_pred c-----ccCCC--C--ccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 327 E-----QEAPG--T--RSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 327 ~-----~~~~~--~--~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
. +.... . ..+..........++|++||++|+++. ||.+++|++..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 282 GWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp TTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred ceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 1 00000 0 000011122346689999999999985 79999999875
No 107
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=6.3e-29 Score=221.58 Aligned_cols=259 Identities=15% Similarity=0.200 Sum_probs=185.6
Q ss_pred cccceeeecccCcCcccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCcccee
Q 015363 14 PLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYK 93 (408)
Q Consensus 14 ~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 93 (408)
-..|++... +.........|.+.|++++|+|++++|++|+.||.|++||+.++..
T Consensus 66 i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~------------------------ 120 (368)
T 3mmy_A 66 VRCWEVQDS-GQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA------------------------ 120 (368)
T ss_dssp EEEEEECTT-SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE------------------------
T ss_pred EEEEEcCCC-CceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCc------------------------
Confidence 455776531 1111124457999999999999999999999999999999887653
Q ss_pred eeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCC
Q 015363 94 TEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVS 173 (408)
Q Consensus 94 ~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 173 (408)
..+.+|. ..|.+++|+|++++.+|++++.|+.|++||+++++....+..+..
T Consensus 121 ~~~~~~~------------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---------------- 172 (368)
T 3mmy_A 121 IQIAQHD------------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER---------------- 172 (368)
T ss_dssp EEEEECS------------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC----------------
T ss_pred eeecccc------------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC----------------
Confidence 2355676 779999997777788999999999999999999887766655432
Q ss_pred ceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCE----EE
Q 015363 174 AIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGET----FI 249 (408)
Q Consensus 174 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~----l~ 249 (408)
..+.......+ ++++.++.+.+|+ +....... ......+...+.++++.++... ++
T Consensus 173 --~~~~~~~~~~~------------~~~~~~~~i~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 173 --CYCADVIYPMA------------VVATAERGLIVYQ-LENQPSEF-----RRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp --EEEEEEETTEE------------EEEEGGGCEEEEE-CSSSCEEE-----EECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred --ceEEEecCCee------------EEEeCCCcEEEEE-eccccchh-----hhccccccCCCceEEEcccCCCCCCeEE
Confidence 12333333344 7788899999999 54322111 1111223344555555554433 88
Q ss_pred Ee-cCCeEEEEeCCCCCc--eeeEeecCCCcccCCcC------------CeEEEEEcCCCCceEEEEeCCCeEEEEEcCC
Q 015363 250 SA-DDLRINLWNLEISNQ--SFNIVDVKPANMEDLTE------------VITSAEFHPTHCNMLAYSSSKGSIRLIDMRQ 314 (408)
Q Consensus 250 ~~-~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~------------~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 314 (408)
++ .|+.|++||++.... .... +..|.. .|++++|+|++ .+|++++.||.|++||+++
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFT-------FKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEE-------EECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTT
T ss_pred EecCCCcEEEEecCCCCcccccee-------eeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCC
Confidence 88 999999999985532 2222 333443 79999999999 9999999999999999998
Q ss_pred CceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEEC
Q 015363 315 SALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDI 369 (408)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~ 369 (408)
++.+ ..+.+| ...|.+++|+|+|++|++++ |+..+.|++
T Consensus 305 ~~~~----~~~~~~------------~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 305 RTKL----KTSEQL------------DQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp TEEE----EECCCC------------SSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred CcEE----EEecCC------------CCCceEEEECCCCCeEEEEecccccccccc
Confidence 8654 555555 47899999999999999984 554444444
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.3e-28 Score=219.08 Aligned_cols=206 Identities=14% Similarity=0.126 Sum_probs=152.0
Q ss_pred eccceEEEEECCCCCeEEE--eecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLAT--GDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~s--g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
+...+.+++|||||++||+ ++.|++|+|||+.+++. +..+. |.
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~-----------------------~~~~~-~~----------- 176 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE-----------------------KFEIE-TR----------- 176 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE-----------------------EEEEE-CS-----------
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE-----------------------EEEeC-CC-----------
Confidence 4456889999999998765 45789999999887653 23333 44
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
..|.+++|+| +|+++++++.| .+++|+..+++.........+ ...+. +++|+|+++.+
T Consensus 177 -~~V~~v~fsp--dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~------~~~v~-------~v~fspdg~~l----- 234 (365)
T 4h5i_A 177 -GEVKDLHFST--DGKVVAYITGS-SLEVISTVTGSCIARKTDFDK------NWSLS-------KINFIADDTVL----- 234 (365)
T ss_dssp -SCCCEEEECT--TSSEEEEECSS-CEEEEETTTCCEEEEECCCCT------TEEEE-------EEEEEETTEEE-----
T ss_pred -CceEEEEEcc--CCceEEeccce-eEEEEEeccCcceeeeecCCC------CCCEE-------EEEEcCCCCEE-----
Confidence 5699999975 48899888755 566777776665543333221 11233 68999999987
Q ss_pred cccCccccCCCCCc----eeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCc
Q 015363 192 CASNDSSFPPGGVS----SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQ 266 (408)
Q Consensus 192 ~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~ 266 (408)
++++.++ .++.|+ +...... ....+. ..+|...|++++|+|+|++||+| .|++|+|||+++. +
T Consensus 235 -------~~~s~d~~~~~~i~~~~-~~~~~~~--~~~~~~-~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~-~ 302 (365)
T 4h5i_A 235 -------IAASLKKGKGIVLTKIS-IKSGNTS--VLRSKQ-VTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL-S 302 (365)
T ss_dssp -------EEEEESSSCCEEEEEEE-EETTEEE--EEEEEE-EESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT-E
T ss_pred -------EEEecCCcceeEEeecc-cccceec--ceeeee-ecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC-c
Confidence 6666555 577777 4332211 111122 36788999999999999999999 9999999999954 4
Q ss_pred eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCC
Q 015363 267 SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQS 315 (408)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 315 (408)
++..+ +.+|...|++++|+|+| ++||+|+.|++|+|||+...
T Consensus 303 ~~~~~------~~gH~~~V~~v~fSpdg-~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 303 MSKIF------KQAHSFAITEVTISPDS-TYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEE------TTSSSSCEEEEEECTTS-CEEEEEETTSEEEEEECCTT
T ss_pred EEEEe------cCcccCCEEEEEECCCC-CEEEEEeCCCeEEEEEcCCC
Confidence 44321 57899999999999999 99999999999999999754
No 109
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=242.80 Aligned_cols=266 Identities=14% Similarity=0.068 Sum_probs=188.7
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
.+|.+.|++++|+|++++||+|+.||+|+||+..+.+. .. ...|.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~-----------------------~~-~~~~~----------- 58 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEV-----------------------VI-KLEDR----------- 58 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEE-----------------------EE-ECSSC-----------
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEE-----------------------EE-EcCCC-----------
Confidence 57899999999999999999999999999999765432 11 12344
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
..|.+++|+| |++|++++.|++|++||+.+++....+.. .+.+. +++|+|+++.+
T Consensus 59 -~~V~~l~fsp---g~~L~S~s~D~~v~lWd~~~~~~~~~~~~---------~~~V~-------~v~~sp~g~~l----- 113 (902)
T 2oaj_A 59 -SAIKEMRFVK---GIYLVVINAKDTVYVLSLYSQKVLTTVFV---------PGKIT-------SIDTDASLDWM----- 113 (902)
T ss_dssp -CCEEEEEEET---TTEEEEEETTCEEEEEETTTCSEEEEEEC---------SSCEE-------EEECCTTCSEE-----
T ss_pred -CCEEEEEEcC---CCEEEEEECcCeEEEEECCCCcEEEEEcC---------CCCEE-------EEEECCCCCEE-----
Confidence 6799999986 56999999999999999999887766642 22344 78999999998
Q ss_pred cccCccccCCCCCceeeeceeeecccccccc--ccc---eeeccccccceEEEEeCCC-CCEEEEe-cCCeEEEEeCCCC
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVA--GCR---RIYAHAHDYHINSISNNSD-GETFISA-DDLRINLWNLEIS 264 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~v~~i~~~~~-~~~l~~~-~d~~i~iwd~~~~ 264 (408)
++++.|+.|++|| +......... ... .. ..+|...|++++|+|+ +..+++| .|+.| +||++.
T Consensus 114 -------~sgs~dg~V~lwd-~~~~~~~~~~i~~~~~~~~~-~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~- 182 (902)
T 2oaj_A 114 -------LIGLQNGSMIVYD-IDRDQLSSFKLDNLQKSSFF-PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE- 182 (902)
T ss_dssp -------EEEETTSCEEEEE-TTTTEEEEEEECCHHHHHTC-SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-
T ss_pred -------EEEcCCCcEEEEE-CCCCccccceeccccccccc-cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-
Confidence 9999999999999 5442211000 000 11 2678899999999996 4688888 89999 999994
Q ss_pred CceeeEeecCC-----------CcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecc-cccccccccCCC
Q 015363 265 NQSFNIVDVKP-----------ANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDT-HSKLFEEQEAPG 332 (408)
Q Consensus 265 ~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~ 332 (408)
.+....+.... .....|...|++++|+|+| .+|++|+.|+.|++||+++++.+.. .+.....|....
T Consensus 183 ~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~ 261 (902)
T 2oaj_A 183 NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQP 261 (902)
T ss_dssp TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCT
T ss_pred CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCC
Confidence 44444432110 0123456789999999999 9999999999999999998865411 111112231100
Q ss_pred C-ccccccccceeEEEEEc----cCC-CEEEEeC-C-----CeEEEEEC
Q 015363 333 T-RSFFTEIIASISDIKFA----RNG-RHILSRD-Y-----MTLKLWDI 369 (408)
Q Consensus 333 ~-~~~~~~h~~~i~~~~~s----pdg-~~l~s~~-d-----~~v~~wd~ 369 (408)
. ..--..|...|.+++|+ |++ .+|++|+ + ..+.+|++
T Consensus 262 ~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 262 DYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp TCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred cCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 0 00000245689999996 443 5677773 3 27999985
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=2.6e-28 Score=222.88 Aligned_cols=242 Identities=14% Similarity=0.271 Sum_probs=181.0
Q ss_pred ceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+|.+.|++++| ++++|++|+.||.|++||+.+++ .+..+.+|.
T Consensus 169 ~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~-----------------------~~~~~~~h~---------- 213 (435)
T 1p22_A 169 LTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE-----------------------MLNTLIHHC---------- 213 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC-----------------------EEEEECCCC----------
T ss_pred EcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc-----------------------EEEEEcCCC----------
Confidence 3469999999999 78899999999999999998765 346677887
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEE---EEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVK---KVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
..|.+++|+ +..+++++.|+.|++||+.+++.. .....+. +.+. ++.+ ++..+
T Consensus 214 --~~v~~l~~~----~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~--------~~v~-------~~~~--~~~~l- 269 (435)
T 1p22_A 214 --EAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR--------AAVN-------VVDF--DDKYI- 269 (435)
T ss_dssp --SCEEEEECC----TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCS--------SCEE-------EEEE--ETTEE-
T ss_pred --CcEEEEEEc----CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC--------CcEE-------EEEe--CCCEE-
Confidence 779999994 349999999999999999987644 2232222 2233 3445 67776
Q ss_pred cccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCc
Q 015363 188 RNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQ 266 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~ 266 (408)
++++.|+.|++|| +.. ..+...+ .+|...|.++++ +++++++| .|+.|++||+++. .
T Consensus 270 -----------~s~~~dg~i~vwd-~~~------~~~~~~~-~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~-~ 327 (435)
T 1p22_A 270 -----------VSASGDRTIKVWN-TST------CEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG-A 327 (435)
T ss_dssp -----------EEEETTSEEEEEE-TTT------CCEEEEE-ECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTC-C
T ss_pred -----------EEEeCCCeEEEEE-CCc------CcEEEEE-cCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCC-C
Confidence 9999999999999 433 2334444 788899999998 46789998 9999999999954 4
Q ss_pred eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEE
Q 015363 267 SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
.... +.+|...|.+++| ++ .+|++|+.||.|++||++++..... .........+.+|.+.|.+
T Consensus 328 ~~~~-------~~~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~-------~~~~~~~~~~~~h~~~v~~ 390 (435)
T 1p22_A 328 CLRV-------LEGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRA-------PAGTLCLRTLVEHSGRVFR 390 (435)
T ss_dssp EEEE-------ECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTS-------CTTTTEEEEECCCSSCCCC
T ss_pred EEEE-------EeCCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCccc-------cccchheeeccCCCCCeEE
Confidence 4433 5779999999999 56 7899999999999999976541100 0000011223455688999
Q ss_pred EEEccCCCEEEEeC-CCeEEEEECCCC
Q 015363 347 IKFARNGRHILSRD-YMTLKLWDINMD 372 (408)
Q Consensus 347 ~~~spdg~~l~s~~-d~~v~~wd~~~~ 372 (408)
++| ++.+|++|+ ||.|++||+.+.
T Consensus 391 l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 391 LQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp EEE--CSSCEEECCSSSEEEEEC----
T ss_pred EEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 999 788899986 799999999873
No 111
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.1e-28 Score=215.36 Aligned_cols=240 Identities=13% Similarity=0.145 Sum_probs=175.6
Q ss_pred eeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC--cEEEEeccCCCCcccCCCCCeEee
Q 015363 93 KTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEK--KVKKVFDWNVHPEKAAGNGPIFGS 170 (408)
Q Consensus 93 ~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~v~~~ 170 (408)
+..+.+|. ..|++++|+|+ +.+|++++.||.|++||+... +....+..+ .+.+.
T Consensus 4 ~~~~~~h~------------~~v~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h--------~~~v~-- 59 (379)
T 3jrp_A 4 VVIANAHN------------ELIHDAVLDYY--GKRLATCSSDKTIKIFEVEGETHKLIDTLTGH--------EGPVW-- 59 (379)
T ss_dssp -CCEEECC------------CCEEEEEECSS--SSEEEEEETTSCEEEEEEETTEEEEEEEECCC--------SSCEE--
T ss_pred cEEecCCc------------ccEEEEEEcCC--CCEEEEEECCCcEEEEecCCCcceeeeEecCC--------CCcEE--
Confidence 45678888 78999999755 889999999999999999844 444444433 22344
Q ss_pred cCCceeeEEccC--CCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC--CC
Q 015363 171 HVSAIPKSYMAN--GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD--GE 246 (408)
Q Consensus 171 ~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~ 246 (408)
++.|+++ +..+ ++++.|+.|++|| +..... ..... ...|...|.+++|+|+ +.
T Consensus 60 -----~~~~~~~~~~~~l------------~s~~~dg~v~iwd-~~~~~~----~~~~~-~~~~~~~v~~~~~~~~~~~~ 116 (379)
T 3jrp_A 60 -----RVDWAHPKFGTIL------------ASCSYDGKVLIWK-EENGRW----SQIAV-HAVHSASVNSVQWAPHEYGP 116 (379)
T ss_dssp -----EEEECCGGGCSEE------------EEEETTSCEEEEE-EETTEE----EEEEE-ECCCSSCEEEEEECCGGGCS
T ss_pred -----EEEeCCCCCCCEE------------EEeccCCEEEEEE-cCCCce----eEeee-ecCCCcceEEEEeCCCCCCC
Confidence 6889876 8877 9999999999999 544221 12233 3678899999999999 89
Q ss_pred EEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcC-------------CCCceEEEEeCCCeEEEEEc
Q 015363 247 TFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHP-------------THCNMLAYSSSKGSIRLIDM 312 (408)
Q Consensus 247 ~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-------------~~~~~l~s~~~dg~i~iwd~ 312 (408)
+|+++ .|+.|++||++........ .+..|...|.+++|+| ++ .+|++++.|+.|++||+
T Consensus 117 ~l~~~~~d~~i~v~d~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~ 189 (379)
T 3jrp_A 117 LLLVASSDGKVSVVEFKENGTTSPI------IIDAHAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADNLVKIWKY 189 (379)
T ss_dssp EEEEEETTSEEEEEECCTTSCCCEE------EEECCTTCEEEEEECCCC----------CTT-CEEEEEETTSCEEEEEE
T ss_pred EEEEecCCCcEEEEecCCCCceeeE------EecCCCCceEEEEEcCccccccccccCCCCC-CEEEEEeCCCeEEEEEe
Confidence 99999 9999999999855332221 1567899999999999 57 89999999999999999
Q ss_pred CCCceecccccccccccCCCCccccccccceeEEEEEccC---CCEEEEeC-CCeEEEEECCCCCC----ceeeeeeccc
Q 015363 313 RQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARN---GRHILSRD-YMTLKLWDINMDSG----PVATFQVHEH 384 (408)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spd---g~~l~s~~-d~~v~~wd~~~~~~----~~~~~~~~~~ 384 (408)
+++.........+.+ |...|.+++|+|+ +.+|++++ |+.|++||+++... .+.....|..
T Consensus 190 ~~~~~~~~~~~~~~~------------h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 257 (379)
T 3jrp_A 190 NSDAQTYVLESTLEG------------HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD 257 (379)
T ss_dssp ETTTTEEEEEEEECC------------CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSS
T ss_pred cCCCcceeeEEEEec------------ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCC
Confidence 877533222233444 4578999999999 89999985 79999999987321 1222222555
Q ss_pred ccceEEecCCCeee
Q 015363 385 LRPKVMHSSKNYFM 398 (408)
Q Consensus 385 ~~~~~~~~~~~~~~ 398 (408)
....+....++..+
T Consensus 258 ~v~~~~~s~~g~~l 271 (379)
T 3jrp_A 258 VLWRASWSLSGNVL 271 (379)
T ss_dssp CEEEEEECSSSCCE
T ss_pred cEEEEEEcCCCCEE
Confidence 44444443444433
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-27 Score=217.54 Aligned_cols=252 Identities=10% Similarity=0.110 Sum_probs=183.2
Q ss_pred eeccceEEEEECCCCCeE-EEeecCCeEEEEEeC--CCCCCCCcccccccccccccCCCccceeeeec--cCCccccccc
Q 015363 33 QEVDIISAIEFDKSGDHL-ATGDRGGRVVLFERT--DTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQ--SHEPEFDYLK 107 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l-~sg~~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~h~~~~~~~~ 107 (408)
.|.+.|++++|+|++++| |+|+.||.|+||++. ++.. +..+. .|.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-----------------------~~~~~~~~~~------- 149 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-----------------------LKLRKRFCFS------- 149 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-----------------------EEEEEEEECS-------
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-----------------------eeeeecccCC-------
Confidence 577789999999999986 999999999999998 5432 23333 344
Q ss_pred ccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEE----EeccCCCCcccCCCCCeEeecCCceeeEEccC-
Q 015363 108 SLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKK----VFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN- 182 (408)
Q Consensus 108 ~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~- 182 (408)
..|.+++|+|+ +.+|++++.|+.|++|++.+++... .+..+ .+.+. +++|+|+
T Consensus 150 -----~~v~~~~~sp~--~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h--------~~~v~-------~~~~sp~~ 207 (450)
T 2vdu_B 150 -----KRPNAISIAED--DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH--------VSMLT-------DVHLIKDS 207 (450)
T ss_dssp -----SCEEEEEECTT--SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC--------SSCEE-------EEEEEECT
T ss_pred -----CCceEEEEcCC--CCEEEEEeCCCcEEEEecCCcccccccceeeecc--------cCceE-------EEEEcCCC
Confidence 67999999754 8899999999999999998765432 11111 22344 7899999
Q ss_pred --CCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEE
Q 015363 183 --GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLW 259 (408)
Q Consensus 183 --~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iw 259 (408)
++.+ ++++.|+.|++|| +.. ..+...+..+|...|++++|+ ++++|+++ .|+.|++|
T Consensus 208 ~~~~~l------------~s~~~d~~i~vwd-~~~------~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vw 267 (450)
T 2vdu_B 208 DGHQFI------------ITSDRDEHIKISH-YPQ------CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAW 267 (450)
T ss_dssp TSCEEE------------EEEETTSCEEEEE-ESC------TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEE
T ss_pred CCCcEE------------EEEcCCCcEEEEE-CCC------CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEE
Confidence 8887 9999999999999 533 233444346899999999999 99999999 99999999
Q ss_pred eCCCCCceeeEeecCC----C--------------cccCCcCCeEEEEEcCCCCceEEEEe-CCCeEEEEEc--CCCcee
Q 015363 260 NLEISNQSFNIVDVKP----A--------------NMEDLTEVITSAEFHPTHCNMLAYSS-SKGSIRLIDM--RQSALC 318 (408)
Q Consensus 260 d~~~~~~~~~~~~~~~----~--------------~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~--~~~~~~ 318 (408)
|+++. +....+.... . ........|.+++|+|++ .+|++++ .|+.|++|++ ..+..+
T Consensus 268 d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~l 345 (450)
T 2vdu_B 268 DWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGDL 345 (450)
T ss_dssp ETTTC-CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTCE
T ss_pred ECCCC-cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCce
Confidence 99954 4444432110 0 001234578999999999 8888888 8999999999 444211
Q ss_pred cccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-------CCeEEEEECCCC
Q 015363 319 DTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-------YMTLKLWDINMD 372 (408)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-------d~~v~~wd~~~~ 372 (408)
..+..+..+ ..|.+++|+|++.++++++ +..|.+|.++..
T Consensus 346 -~~~~~~~~~-------------~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 346 -ALKQIITFP-------------YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp -EEEEEEECS-------------SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred -eeccEeccC-------------CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 112334443 5799999999654444433 345889987653
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.2e-27 Score=203.17 Aligned_cols=235 Identities=13% Similarity=0.077 Sum_probs=153.7
Q ss_pred eccceEEEEECCC----CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccc---cccCCCccceeeeeccCCcccccc
Q 015363 34 EVDIISAIEFDKS----GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDY---SMSRHPEFRYKTEFQSHEPEFDYL 106 (408)
Q Consensus 34 h~~~V~~~~~s~~----~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~h~~~~~~~ 106 (408)
|.+.|.+|+|+|+ ++++++++.+ +++|++.+++.. .......+. .+.++|+.+.+..+.+|.
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv---~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~------ 178 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLV---SSSGTLSDQQVEVMTFAEDGGGKENQFLMP------ 178 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEE---EEESSSTTCEEEEEEECTTSCEEEEEEECC------
T ss_pred cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEE---EecccCCCCcEEEEEECCCCceeeeeccCC------
Confidence 4568999999999 9999998854 777887654321 000111111 355667777777888888
Q ss_pred cccccccceeEEEEee-cCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 107 KSLEIEEKINKIRWCQ-SANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 107 ~~~~~~~~v~~v~~~p-~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
..++.++|+| +.++.+|++++.|++|+|||+.++++...+..+... ...+. .++|+|+|+.
T Consensus 179 ------~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~-----v~~v~-------~vafSpdG~~ 240 (356)
T 2w18_A 179 ------PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY-----QASVC-------HKAYSEMGLL 240 (356)
T ss_dssp ------CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC--------CCCE-------EEEEEETTEE
T ss_pred ------CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc-----eeeeE-------EEEECCCCCE
Confidence 5689999988 445789999999999999999999988877643211 00111 4567777765
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCC
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEIS 264 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~ 264 (408)
+ ++++ +.. ....+++| .|++|++||.. .
T Consensus 241 l------------vs~s-----------------------------~~~---------~~w~laSGs~D~tIklWd~~-t 269 (356)
T 2w18_A 241 F------------IVLS-----------------------------HPC---------AKESESLRSPVFQLIVINPK-T 269 (356)
T ss_dssp E------------EEEC--------------------------------------------------CCEEEEEEETT-T
T ss_pred E------------EEec-----------------------------cCC---------CcceeeccCCCcEEEEEECC-C
Confidence 4 1110 000 01245677 89999999998 4
Q ss_pred CceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccce-
Q 015363 265 NQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIAS- 343 (408)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~- 343 (408)
++.+.++.+.. ..+|...+.+..++ + .++|+++.|++|+|||+.+++.. .++.+|. ..
T Consensus 270 gk~l~v~~~~~--p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tGk~l----~tL~gH~------------~~v 328 (356)
T 2w18_A 270 TLSVGVMLYCL--PPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLGQCT----ALLPPVS------------DQH 328 (356)
T ss_dssp TEEEEEEEECC--CTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTTCSEE----EEECCC--------------CC
T ss_pred CEEEEEEEeec--cCCCcceeEccccC--C-CEEEEEcCCCcEEEEECCCCcEE----EEecCCC------------CCe
Confidence 44443321100 13565555544444 6 78999999999999999999765 6676663 33
Q ss_pred eEEEEEccCCCEEEEeC-CCeEEEEEC
Q 015363 344 ISDIKFARNGRHILSRD-YMTLKLWDI 369 (408)
Q Consensus 344 i~~~~~spdg~~l~s~~-d~~v~~wd~ 369 (408)
+..++|+|||++|++|+ |++|+|||+
T Consensus 329 vs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 329 WSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEecC
Confidence 44689999999999996 799999996
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=215.61 Aligned_cols=251 Identities=10% Similarity=0.079 Sum_probs=176.9
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
.+|.+.|.+++|||+|++||+++.||.|+||+.++ .+..+. |.....
T Consensus 82 ~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-------------------------~l~~l~-~~~~~~------- 128 (588)
T 2j04_A 82 SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-------------------------MLTNLD-SKGNLS------- 128 (588)
T ss_dssp TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-------------------------EEEECC-CSSCST-------
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-------------------------eeeecc-CCCccc-------
Confidence 46788999999999999999999999999999432 223344 441000
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE-------EEEeccCCCCcccCCCCCeEeecCCceeeEEccCCC
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV-------KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG 184 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 184 (408)
...|.+++|+|+ |++||+|+.||+|++||+.++.. ...+..+... ..+.|. +++|+|+|
T Consensus 129 ~~sv~svafSPD--G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g----h~~~V~-------sVawSPdg- 194 (588)
T 2j04_A 129 SRTYHCFEWNPI--ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAG----SKDWVT-------HIVWYEDV- 194 (588)
T ss_dssp TTCEEEEEECSS--SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTT----CCCCEE-------EEEEETTE-
T ss_pred cccEEEEEEcCC--CCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccc----ccccEE-------EEEEcCCc-
Confidence 035999999765 89999999999999999998752 3443222111 123566 79999999
Q ss_pred eeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCCC
Q 015363 185 CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEIS 264 (408)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~ 264 (408)
+ ++++.|+.|++|+ +..... ....+.+..+|...|.+++|+ ++.||++.+++|++||+. +
T Consensus 195 -L------------aass~D~tVrlWd-~~~~~~---~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~-~ 254 (588)
T 2j04_A 195 -L------------VAALSNNSVFSMT-VSASSH---QPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLK-N 254 (588)
T ss_dssp -E------------EEEETTCCEEEEC-CCSSSS---CCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETT-T
T ss_pred -E------------EEEeCCCeEEEEE-CCCCcc---ccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECC-C
Confidence 5 7888899999999 544221 111122224677889999999 689998867999999999 3
Q ss_pred CceeeEeecCCCcccCCcCCeEEEEE--cCCCCceEEEEeCCCeEEEEEcCCCc-----ee----cccccccccccCCCC
Q 015363 265 NQSFNIVDVKPANMEDLTEVITSAEF--HPTHCNMLAYSSSKGSIRLIDMRQSA-----LC----DTHSKLFEEQEAPGT 333 (408)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~s~~~dg~i~iwd~~~~~-----~~----~~~~~~~~~~~~~~~ 333 (408)
++.... ..+|...+..++| +|++ ..+++++.||+ ++|....-. .. ++.++.+... ...
T Consensus 255 ~~~~~~-------~~gh~~~V~~va~~~s~d~-~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~--g~~ 323 (588)
T 2j04_A 255 YSISSL-------KTGSLENFHIIPLNHEKES-TILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTI--WNE 323 (588)
T ss_dssp TEEEEE-------ECSCCSCCCEEEETTCSSC-EEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTT--TTS
T ss_pred CeEEEE-------EcCCCceEEEEEeeeCCCC-CEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECC--CCc
Confidence 433222 2379999999999 9999 99999999999 999975211 00 1111111110 011
Q ss_pred ccccccccceeEEEEEccCCCEEEEeCC
Q 015363 334 RSFFTEIIASISDIKFARNGRHILSRDY 361 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg~~l~s~~d 361 (408)
...+.+ ...|.+++|||||+.+|++++
T Consensus 324 l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 324 FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 222333 677999999999999998853
No 115
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.1e-26 Score=211.60 Aligned_cols=233 Identities=15% Similarity=0.218 Sum_probs=171.2
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCC----------CcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQE----------KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA 181 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 181 (408)
...|++++|+|. ++.+|++++.||.|++|++.. ......+..+. +.+. +++|+|
T Consensus 128 ~~~v~~l~~~p~-~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~--------~~v~-------~l~~~~ 191 (430)
T 2xyi_A 128 EGEVNRARYMPQ-NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ--------KEGY-------GLSWNP 191 (430)
T ss_dssp SSCCSEEEEETT-EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCS--------SCCC-------CEEECT
T ss_pred CCcEEEEEECCC-CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCC--------CCeE-------EEEeCC
Confidence 378999999863 256899999999999999986 23333333222 1222 789999
Q ss_pred CCC-eeecccccccCccccCCCCCceeeeceeeecccc-ccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEE
Q 015363 182 NGG-CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQET-NLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRIN 257 (408)
Q Consensus 182 ~~~-~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~ 257 (408)
++. .+ ++++.++.|++|+ +..... .........+ ..|...|.+++|+| ++.+|+++ .|+.|+
T Consensus 192 ~~~~~l------------~s~~~dg~i~vwd-~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~ 257 (430)
T 2xyi_A 192 NLNGYL------------LSASDDHTICLWD-INATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLM 257 (430)
T ss_dssp TSTTEE------------EEECTTSCEEEEE-TTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred CCCCeE------------EEEeCCCeEEEEe-CCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence 988 66 9999999999999 544211 1111223333 68889999999999 67888888 899999
Q ss_pred EEeCCCCC--ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcc
Q 015363 258 LWNLEISN--QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRS 335 (408)
Q Consensus 258 iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 335 (408)
+||++... ..... +..|...|++++|+|++..+|++|+.||.|++||+++... ++..+..|
T Consensus 258 i~d~~~~~~~~~~~~-------~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---~~~~~~~h------- 320 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHT-------VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL---KLHSFESH------- 320 (430)
T ss_dssp EEETTCSCSSSCSEE-------EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEECC-------
T ss_pred EEECCCCCCCcceeE-------eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---CeEEeecC-------
Confidence 99999653 23222 4578899999999999955899999999999999997532 22455545
Q ss_pred ccccccceeEEEEEccCCC-EEEEe-CCCeEEEEECCCCC-------------CceeeeeecccccceEEecCCCe
Q 015363 336 FFTEIIASISDIKFARNGR-HILSR-DYMTLKLWDINMDS-------------GPVATFQVHEHLRPKVMHSSKNY 396 (408)
Q Consensus 336 ~~~~h~~~i~~~~~spdg~-~l~s~-~d~~v~~wd~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 396 (408)
...|.+++|+|+++ +|+++ .|+.|++||+...+ .++..+.+|......+....++.
T Consensus 321 -----~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 391 (430)
T 2xyi_A 321 -----KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 391 (430)
T ss_dssp -----SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSST
T ss_pred -----CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCC
Confidence 57899999999985 57777 47999999998632 56667777777655555444444
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.9e-25 Score=201.09 Aligned_cols=252 Identities=9% Similarity=0.111 Sum_probs=187.1
Q ss_pred eeeccceEEEEECCCCCeE-EEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHL-ATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l-~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
+.+...+.+++|+|++++| ++++.|+.|++||+.+++. ...+..+
T Consensus 28 ~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~-----------------------~~~~~~~----------- 73 (391)
T 1l0q_A 28 IPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV-----------------------IATVPAG----------- 73 (391)
T ss_dssp EECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE-----------------------EEEEECS-----------
T ss_pred eecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeE-----------------------EEEEECC-----------
Confidence 3445668999999999976 6777999999999877653 2333333
Q ss_pred cccceeEEEEeecCCCcEEEEE-eCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 111 IEEKINKIRWCQSANSALYLLS-TNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..+.+++|+|+ +++++++ +.|+.|++||+.+++.......+. .+. .++|+|+++.+
T Consensus 74 --~~v~~~~~spd--g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---------~~~-------~~~~s~dg~~l--- 130 (391)
T 1l0q_A 74 --SSPQGVAVSPD--GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---------SPL-------GLALSPDGKKL--- 130 (391)
T ss_dssp --SSEEEEEECTT--SSEEEEEETTTTEEEEEETTTTEEEEEEECSS---------SEE-------EEEECTTSSEE---
T ss_pred --CCccceEECCC--CCEEEEEECCCCEEEEEECCCCeEEEEEeCCC---------Ccc-------eEEECCCCCEE---
Confidence 34999999754 7777554 577999999999998777665432 122 68999999875
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEE-EEe-cCCeEEEEeCCCCCce
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETF-ISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~~-~d~~i~iwd~~~~~~~ 267 (408)
+++++.++.|++|| +.. .+....+ ..+ ..+.+++|+|+++.+ +++ .++.|++||+++ ...
T Consensus 131 --------~~~~~~~~~v~~~d-~~~------~~~~~~~-~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~ 192 (391)
T 1l0q_A 131 --------YVTNNGDKTVSVIN-TVT------KAVINTV-SVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSV 192 (391)
T ss_dssp --------EEEETTTTEEEEEE-TTT------TEEEEEE-ECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEE
T ss_pred --------EEEeCCCCEEEEEE-CCC------CcEEEEE-ecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeE
Confidence 35778899999999 432 2222332 233 457899999999887 456 799999999984 444
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe---CCCeEEEEEcCCCceecccccccccccCCCCcccccccccee
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS---SKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI 344 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 344 (408)
...+ .+...+.+++|+|++ ++|++++ .++.|++||+++++.. ..+..+ ..+
T Consensus 193 ~~~~--------~~~~~~~~~~~~~~g-~~l~~~~~~~~~~~v~~~d~~~~~~~----~~~~~~-------------~~~ 246 (391)
T 1l0q_A 193 IDTV--------KVEAAPSGIAVNPEG-TKAYVTNVDKYFNTVSMIDTGTNKIT----ARIPVG-------------PDP 246 (391)
T ss_dssp EEEE--------ECSSEEEEEEECTTS-SEEEEEEECSSCCEEEEEETTTTEEE----EEEECC-------------SSE
T ss_pred EEEE--------ecCCCccceEECCCC-CEEEEEecCcCCCcEEEEECCCCeEE----EEEecC-------------CCc
Confidence 4332 245578999999999 7777776 6899999999988553 444444 357
Q ss_pred EEEEEccCCCEE-EEeC-CCeEEEEECCCCCCceeeeeecccc
Q 015363 345 SDIKFARNGRHI-LSRD-YMTLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 345 ~~~~~spdg~~l-~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
.+++|+|+|++| ++++ |+.|++||+.+ ++.++.+..|...
T Consensus 247 ~~~~~s~dg~~l~~s~~~d~~v~v~d~~~-~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 247 AGIAVTPDGKKVYVALSFXNTVSVIDTAT-NTITATMAVGKNP 288 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEECSSSE
T ss_pred cEEEEccCCCEEEEEcCCCCEEEEEECCC-CcEEEEEECCcCC
Confidence 899999999988 4554 69999999997 7888888776543
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=8.4e-26 Score=199.65 Aligned_cols=219 Identities=11% Similarity=0.091 Sum_probs=163.3
Q ss_pred eeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc----EEEEeccCCCCcccCCCCCeEee
Q 015363 95 EFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK----VKKVFDWNVHPEKAAGNGPIFGS 170 (408)
Q Consensus 95 ~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~ 170 (408)
.+.+|. +.|++++|+|+ +.+|++++.||.|++||+.++. ....+..+ .+.+.
T Consensus 6 ~~~gH~------------~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------~~~v~-- 61 (351)
T 3f3f_A 6 FDSGHD------------DLVHDVVYDFY--GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH--------DSSIV-- 61 (351)
T ss_dssp EECCCS------------SCEEEEEECSS--SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC--------SSCEE--
T ss_pred cCcccc------------cceeEEEEcCC--CCEEEEeeCCCeEEEEECCCCCCcceecceeccC--------CCcEE--
Confidence 467888 78999999765 8899999999999999998763 33333333 22344
Q ss_pred cCCceeeEEcc--CCCeeecccccccCccccCCCCCceeeeceeeecccccccc---ccceeeccccccceEEEEeCCC-
Q 015363 171 HVSAIPKSYMA--NGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVA---GCRRIYAHAHDYHINSISNNSD- 244 (408)
Q Consensus 171 ~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~i~~~~~- 244 (408)
+++|+| ++..+ ++++.|+.|++|| +......... .+...+ ..|...|.+++|+|+
T Consensus 62 -----~~~~~~~~d~~~l------------~s~~~dg~v~vwd-~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 122 (351)
T 3f3f_A 62 -----AIDWASPEYGRII------------ASASYDKTVKLWE-EDPDQEECSGRRWNKLCTL-NDSKGSLYSVKFAPAH 122 (351)
T ss_dssp -----EEEECCGGGCSEE------------EEEETTSCEEEEE-ECTTSCTTSSCSEEEEEEE-CCCSSCEEEEEECCGG
T ss_pred -----EEEEcCCCCCCEE------------EEEcCCCeEEEEe-cCCCcccccccCcceeeee-cccCCceeEEEEcCCC
Confidence 789998 58887 9999999999999 6543221111 233333 688999999999999
Q ss_pred -CCEEEEe-cCCeEEEEeCCCCCceeeE-----eecCCCcccCCcCCeEEEEEcCC---CCceEEEEeCCCeEEEEEcCC
Q 015363 245 -GETFISA-DDLRINLWNLEISNQSFNI-----VDVKPANMEDLTEVITSAEFHPT---HCNMLAYSSSKGSIRLIDMRQ 314 (408)
Q Consensus 245 -~~~l~~~-~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~dg~i~iwd~~~ 314 (408)
+.+|+++ .|+.|++||+++....... ..........|...+.+++|+|+ + .+|++++.|+.+.+|+...
T Consensus 123 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~l~~~~~~~~~~~~~~~~ 201 (351)
T 3f3f_A 123 LGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP-EKLAVSALEQAIIYQRGKD 201 (351)
T ss_dssp GCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSC-CEEEEEETTEEEEEEECTT
T ss_pred CCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCC-cEEEEecCCCcEEEEccCC
Confidence 9999998 9999999999854432111 01111122367888999999997 6 8999999999998888777
Q ss_pred CceecccccccccccCCCCccccccccceeEEEEEccCC----CEEEEeC-CCeEEEEECCC
Q 015363 315 SALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNG----RHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg----~~l~s~~-d~~v~~wd~~~ 371 (408)
+... .+..+.+| ...|.+++|+|++ ++|++|+ |+.|++||++.
T Consensus 202 ~~~~--~~~~~~~h------------~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 202 GKLH--VAAKLPGH------------KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp SCEE--EEEECCCC------------CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred Ccee--eeeecCCC------------CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 6431 12344444 5789999999998 7899885 79999999986
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=2e-25 Score=203.67 Aligned_cols=259 Identities=7% Similarity=-0.001 Sum_probs=190.4
Q ss_pred eeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
.....+.+++|+|++.++++++.++.|++||..+++.. + ......+.+|.
T Consensus 120 ~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~----~--------------~~~~~~~~~~~------------ 169 (433)
T 3bws_A 120 KTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTV----R--------------LSPPEKYKKKL------------ 169 (433)
T ss_dssp ECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEE----E--------------ECCCHHHHTTC------------
T ss_pred cCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEe----e--------------ecCcccccccC------------
Confidence 34456779999998888899999999999998876531 0 00001344666
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..|.+++|+|+ +.++++++.|+.|++||+.+++....+..+.. .+. .++|+|+++.+
T Consensus 170 ~~v~~~~~~~~--~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~--------~~~-------~~~~~~~~~~l------ 226 (433)
T 3bws_A 170 GFVETISIPEH--NELWVSQMQANAVHVFDLKTLAYKATVDLTGK--------WSK-------ILLYDPIRDLV------ 226 (433)
T ss_dssp CEEEEEEEGGG--TEEEEEEGGGTEEEEEETTTCCEEEEEECSSS--------SEE-------EEEEETTTTEE------
T ss_pred CceeEEEEcCC--CEEEEEECCCCEEEEEECCCceEEEEEcCCCC--------Cee-------EEEEcCCCCEE------
Confidence 67999999654 78999999999999999999887776654321 222 68999999876
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-c--------CCeEEEEeCCC
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-D--------DLRINLWNLEI 263 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~--------d~~i~iwd~~~ 263 (408)
+++++.++.|++|| +.. .+....+ .. ...+.+++|+|+++.++++ . |+.|++||+++
T Consensus 227 -----~~~~~~~~~i~~~d-~~~------~~~~~~~-~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~ 292 (433)
T 3bws_A 227 -----YCSNWISEDISVID-RKT------KLEIRKT-DK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK 292 (433)
T ss_dssp -----EEEETTTTEEEEEE-TTT------TEEEEEC-CC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT
T ss_pred -----EEEecCCCcEEEEE-CCC------CcEEEEe-cC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC
Confidence 34556899999999 432 2222222 22 3458999999999988876 3 77999999984
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccce
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIAS 343 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 343 (408)
.+.... ..|...+.+++|+|++..++++++.|+.|++||+.+++.. ..+.. ...
T Consensus 293 -~~~~~~--------~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~----~~~~~-------------~~~ 346 (433)
T 3bws_A 293 -EKLIDT--------IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ----KSIPV-------------FDK 346 (433)
T ss_dssp -TEEEEE--------EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE----EEEEC-------------SSS
T ss_pred -CcEEee--------ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE----EEecC-------------CCC
Confidence 444332 2345578899999999456677789999999999987543 33332 256
Q ss_pred eEEEEEccCCCEEEEeC----------------CCeEEEEECCCCCCceeeeeecccc
Q 015363 344 ISDIKFARNGRHILSRD----------------YMTLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 344 i~~~~~spdg~~l~s~~----------------d~~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
+.+++|+|+|++|++++ ||.|++||+.+ ++.+..+..+...
T Consensus 347 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-~~~~~~~~~~~~~ 403 (433)
T 3bws_A 347 PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-DTVKEFWEAGNQP 403 (433)
T ss_dssp EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT-TEEEEEEECSSSE
T ss_pred CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC-CcEEEEecCCCCC
Confidence 89999999999888763 35999999987 7888888775443
No 119
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=2.6e-25 Score=201.09 Aligned_cols=230 Identities=13% Similarity=0.172 Sum_probs=165.0
Q ss_pred eeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCC-----cccCCCCCe
Q 015363 93 KTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHP-----EKAAGNGPI 167 (408)
Q Consensus 93 ~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~v 167 (408)
...+.+|. +.|++++|+|. ++.+|++++.||.|++||+.+++........... ......+.+
T Consensus 36 ~~~~~~h~------------~~v~~~~~s~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 36 RDVERIHG------------GGINTLDIEPV-EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp EEECCCCS------------SCEEEEEECTT-TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred eeeeeccC------------CcEEEEEEecC-CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcE
Confidence 34567788 78999999761 4789999999999999999976543332211000 000113344
Q ss_pred EeecCCceeeEEcc-CCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC-
Q 015363 168 FGSHVSAIPKSYMA-NGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG- 245 (408)
Q Consensus 168 ~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~- 245 (408)
. ++.|+| ++..+ ++++.++.|++|| +.. ...... ..+...+.++.++|.+
T Consensus 103 ~-------~~~~~~~~~~~l------------~s~~~d~~i~iwd-~~~------~~~~~~--~~~~~~~~~~~~~~~~~ 154 (408)
T 4a11_B 103 E-------TVQWYPHDTGMF------------TSSSFDKTLKVWD-TNT------LQTADV--FNFEETVYSHHMSPVST 154 (408)
T ss_dssp E-------EEEECTTCTTCE------------EEEETTSEEEEEE-TTT------TEEEEE--EECSSCEEEEEECSSCS
T ss_pred E-------EEEEccCCCcEE------------EEEeCCCeEEEee-CCC------Ccccee--ccCCCceeeeEeecCCC
Confidence 4 789999 56666 8999999999999 433 222222 2356778899998854
Q ss_pred --CEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccc
Q 015363 246 --ETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHS 322 (408)
Q Consensus 246 --~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 322 (408)
.+++++ .|+.|++||++... .... +..|...|.+++|+|++..+|++++.||.|++||++++......+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~-~~~~-------~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~ 226 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGS-CSHI-------LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITL 226 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSC-CCEE-------ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEEC
T ss_pred CCcEEEEEcCCCeEEEEeCCCcc-eeee-------ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccc
Confidence 489988 99999999999544 3332 567899999999999994479999999999999999875332111
Q ss_pred cccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 323 KLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 323 ~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
....+.........+.+|...|.+++|+|++++|++++ |+.|++||+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 227 DQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp CTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 11111122223344567889999999999999999985 79999999986
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.3e-26 Score=222.44 Aligned_cols=239 Identities=13% Similarity=0.148 Sum_probs=174.9
Q ss_pred eeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC--cEEEEeccCCCCcccCCCCCeEeec
Q 015363 94 TEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEK--KVKKVFDWNVHPEKAAGNGPIFGSH 171 (408)
Q Consensus 94 ~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (408)
..+.+|. +.|++++|+|+ +.+|++|+.||+|++||+.++ +....+..+ .+.|.
T Consensus 3 ~~l~gH~------------~~V~~l~~s~d--g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h--------~~~V~--- 57 (753)
T 3jro_A 3 VIANAHN------------ELIHDAVLDYY--GKRLATCSSDKTIKIFEVEGETHKLIDTLTGH--------EGPVW--- 57 (753)
T ss_dssp -----CC------------CCEEEECCCSS--SCCEEEEETTTEEEEEEEETTEEEEEEEECCC--------SSCEE---
T ss_pred eecccCc------------ceeEEEEECCC--CCeEEEEECCCcEEEEecCCCCCccceeccCC--------cCceE---
Confidence 3567888 78999999765 789999999999999999854 344444433 23455
Q ss_pred CCceeeEEccC--CCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC--CCE
Q 015363 172 VSAIPKSYMAN--GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD--GET 247 (408)
Q Consensus 172 ~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~ 247 (408)
++.|+|+ +..+ ++++.|+.|++|| +..... ..... ...|...|++++|+|+ ++.
T Consensus 58 ----~l~~s~~~~~~~l------------~s~s~Dg~I~vwd-~~~~~~----~~~~~-~~~h~~~V~~v~~sp~~~~~~ 115 (753)
T 3jro_A 58 ----RVDWAHPKFGTIL------------ASCSYDGKVLIWK-EENGRW----SQIAV-HAVHSASVNSVQWAPHEYGPL 115 (753)
T ss_dssp ----EEEECCTTSCSEE------------EEEETTSCEEEEE-EETTEE----EEEEE-ECCCSSCEEEEEECCGGGCSE
T ss_pred ----EEEecCCCCCCEE------------EEEeCCCeEEEEE-CCCCcc----ccccc-ccCCCCCeEEEEECCCCCCCE
Confidence 7899887 8877 9999999999999 544221 12233 3678899999999999 999
Q ss_pred EEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcC-------------CCCceEEEEeCCCeEEEEEcC
Q 015363 248 FISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHP-------------THCNMLAYSSSKGSIRLIDMR 313 (408)
Q Consensus 248 l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-------------~~~~~l~s~~~dg~i~iwd~~ 313 (408)
+++| .||.|++||++........ .+.+|...|.+++|+| ++ .+|++|+.||.|++||++
T Consensus 116 l~sgs~dg~I~vwdl~~~~~~~~~------~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~-~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 116 LLVASSDGKVSVVEFKENGTTSPI------IIDAHAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp EEEEETTSEEEEEECCSSSCCCCE------EEECCSSCEEEEEECCCC---------CGGG-CCEEEEETTSCEEEEEEE
T ss_pred EEEEeCCCcEEEEEeecCCCccee------EeecCCCceEEEEecCcccccccccccCCCC-CEEEEEECCCeEEEEecc
Confidence 9999 9999999999855332221 2567899999999999 46 899999999999999999
Q ss_pred CCceecccccccccccCCCCccccccccceeEEEEEccC---CCEEEEeC-CCeEEEEECCCCCC----ceeeeeecccc
Q 015363 314 QSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARN---GRHILSRD-YMTLKLWDINMDSG----PVATFQVHEHL 385 (408)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spd---g~~l~s~~-d~~v~~wd~~~~~~----~~~~~~~~~~~ 385 (408)
++.........+.+ |...|.+++|+|+ +.+|++|+ |+.|++||+++... .+.....|...
T Consensus 189 ~~~~~~~~~~~~~~------------h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 256 (753)
T 3jro_A 189 SDAQTYVLESTLEG------------HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV 256 (753)
T ss_dssp TTTTEEEEEEEECC------------CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSC
T ss_pred CCcccceeeeeecC------------CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCc
Confidence 87432222234444 4688999999999 89999985 79999999987311 33344456666
Q ss_pred cceEEecCCCeee
Q 015363 386 RPKVMHSSKNYFM 398 (408)
Q Consensus 386 ~~~~~~~~~~~~~ 398 (408)
...+....++..+
T Consensus 257 v~~l~~spdg~~l 269 (753)
T 3jro_A 257 LWRASWSLSGNVL 269 (753)
T ss_dssp CCCEEECTTTCCE
T ss_pred eEEEEEcCCCCEE
Confidence 5555544444433
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.1e-26 Score=201.57 Aligned_cols=227 Identities=16% Similarity=0.124 Sum_probs=159.7
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCC
Q 015363 125 NSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGV 204 (408)
Q Consensus 125 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 204 (408)
++.++++|+.||+|++||+.+++....+.... +. .+.++|+ + ++++.|
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~----------v~-------~~~~~~~---~------------~s~s~D 94 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTITTPN----------PR-------TGGEHPA---I------------ISRGPC 94 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEEEEC----------CC-------TTCCCCS---E------------EEECST
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEecCC----------ce-------eeeeCCc---e------------EEecCC
Confidence 36799999999999999999988766554211 11 3455665 4 899999
Q ss_pred ceeeeceeeecccc---ccccccceeeccccccceEEEEeCC--CCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcc
Q 015363 205 SSLRLPVVVTSQET---NLVAGCRRIYAHAHDYHINSISNNS--DGETFISA-DDLRINLWNLEISNQSFNIVDVKPANM 278 (408)
Q Consensus 205 ~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~ 278 (408)
+.|++|+ ...... .......+.+...|...|.+++|+| ++++|+++ .|+.|++||+++.. ..... .
T Consensus 95 ~~i~~w~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-~~~~~------~ 166 (343)
T 3lrv_A 95 NRLLLLY-PGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-QYIVH------S 166 (343)
T ss_dssp TEEEEEE-TTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-EEEEE------C
T ss_pred CeEEEEE-ccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-EEEEE------e
Confidence 9999998 432110 0112223333346778899999999 99999998 99999999999544 33331 2
Q ss_pred cCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEE
Q 015363 279 EDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILS 358 (408)
Q Consensus 279 ~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s 358 (408)
..+...+++++|+|++ .+|++|+.|+.|++||+++++... ..+.. +|...|.+++|+|+|.+|++
T Consensus 167 ~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~~---~~~~~-----------~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 167 AKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQAS---SRFPV-----------DEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp CCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSCC---EECCC-----------CTTSCEEEEEECTTSSEEEE
T ss_pred cCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCCc---cEEec-----------cCCCCEEEEEEeCCCCEEEE
Confidence 3455679999999999 999999999999999999885421 23333 14588999999999999999
Q ss_pred eCCCeEEEEECCCCCCceeeeee---cccccc--eEEecCCCeeeee----eceeeec
Q 015363 359 RDYMTLKLWDINMDSGPVATFQV---HEHLRP--KVMHSSKNYFMGL----DNIHTLY 407 (408)
Q Consensus 359 ~~d~~v~~wd~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~----d~~~~~~ 407 (408)
++++.|++||+++ ++.+..+.. |..... .+....++..++. |...++|
T Consensus 232 ~~~~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~ 288 (343)
T 3lrv_A 232 ECDQTVVCFDLRK-DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIY 288 (343)
T ss_dssp EESSBEEEEETTS-STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EeCCeEEEEEcCC-CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEE
Confidence 9877999999998 566655554 323322 2443334555554 6666665
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=6.9e-25 Score=200.14 Aligned_cols=238 Identities=10% Similarity=0.082 Sum_probs=180.4
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|.+.|.+++|+|+++++++++.|+.|++||+.+++. ...+..|.
T Consensus 166 ~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~-----------------------~~~~~~~~----------- 211 (433)
T 3bws_A 166 KKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY-----------------------KATVDLTG----------- 211 (433)
T ss_dssp HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE-----------------------EEEEECSS-----------
T ss_pred cccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE-----------------------EEEEcCCC-----------
Confidence 36788999999999999999999999999999876642 34556666
Q ss_pred ccceeEEEEeecCCCcEEE-EEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 112 EEKINKIRWCQSANSALYL-LSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..+.+++|+|+ +..++ +++.|+.|++||+.+++....+.... .+. .++++|+++.+
T Consensus 212 -~~~~~~~~~~~--~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~~-------~~~~~~~g~~l---- 268 (433)
T 3bws_A 212 -KWSKILLYDPI--RDLVYCSNWISEDISVIDRKTKLEIRKTDKIG---------LPR-------GLLLSKDGKEL---- 268 (433)
T ss_dssp -SSEEEEEEETT--TTEEEEEETTTTEEEEEETTTTEEEEECCCCS---------EEE-------EEEECTTSSEE----
T ss_pred -CCeeEEEEcCC--CCEEEEEecCCCcEEEEECCCCcEEEEecCCC---------Cce-------EEEEcCCCCEE----
Confidence 66999999765 66775 45589999999999988766554421 122 68999999887
Q ss_pred ccccCccccCCC--------CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEE-EEe-cCCeEEEEe
Q 015363 191 GCASNDSSFPPG--------GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETF-ISA-DDLRINLWN 260 (408)
Q Consensus 191 ~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~~-~d~~i~iwd 260 (408)
++++ .++.|++|| +... +.... ..|...+.+++|+|+++.+ +++ .++.|++||
T Consensus 269 --------~~~~~~~~~~~~~dg~i~~~d-~~~~------~~~~~--~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d 331 (433)
T 3bws_A 269 --------YIAQFSASNQESGGGRLGIYS-MDKE------KLIDT--IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYD 331 (433)
T ss_dssp --------EEEEEESCTTCSCCEEEEEEE-TTTT------EEEEE--EEEEECEEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred --------EEEECCCCccccCCCeEEEEE-CCCC------cEEee--ccCCCCcceEEECCCCCEEEEEecCCCEEEEEE
Confidence 4444 588999999 4332 12222 2445678899999999755 555 899999999
Q ss_pred CCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeC---------------CCeEEEEEcCCCceeccccccc
Q 015363 261 LEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSS---------------KGSIRLIDMRQSALCDTHSKLF 325 (408)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---------------dg~i~iwd~~~~~~~~~~~~~~ 325 (408)
+++ .+....+ . +...+.+++|+|++ +++++++. ||.|++||+.+++.. ..+
T Consensus 332 ~~~-~~~~~~~-------~-~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~----~~~ 397 (433)
T 3bws_A 332 LKE-KKVQKSI-------P-VFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK----EFW 397 (433)
T ss_dssp TTT-TEEEEEE-------E-CSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE----EEE
T ss_pred CCC-CcEEEEe-------c-CCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEEECCCCcEE----EEe
Confidence 984 4444332 2 46678999999999 77777766 579999999988654 444
Q ss_pred ccccCCCCccccccccceeEEEEEccCCCEEEEe-C-CCeEEEEECC
Q 015363 326 EEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-D-YMTLKLWDIN 370 (408)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~-d~~v~~wd~~ 370 (408)
..+ ..+.+++|+|+|++|+++ . |+.|++|+++
T Consensus 398 ~~~-------------~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 398 EAG-------------NQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ECS-------------SSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cCC-------------CCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 433 468999999999998876 4 7999999986
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=3.8e-24 Score=192.48 Aligned_cols=236 Identities=11% Similarity=0.076 Sum_probs=176.3
Q ss_pred CeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEEeecCCCc
Q 015363 48 DHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSA 127 (408)
Q Consensus 48 ~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~ 127 (408)
.++++++.|+.|++||+.+++. +..+..|. .+.+++|+|+ +.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~-----------------------~~~~~~~~-------------~~~~~~~s~d--g~ 44 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV-----------------------TATIPVGS-------------NPMGAVISPD--GT 44 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE-----------------------EEEEECSS-------------SEEEEEECTT--SS
T ss_pred EEEEEcCCCCEEEEEECCCCeE-----------------------EEEeecCC-------------CcceEEECCC--CC
Confidence 4688999999999999887652 34455553 4899999754 77
Q ss_pred EE-EEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCce
Q 015363 128 LY-LLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSS 206 (408)
Q Consensus 128 ~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (408)
++ ++++.|+.|++||+.+++....+..+. .+. .++|+|+++.+ ++++..++.
T Consensus 45 ~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~---------~v~-------~~~~spdg~~l-----------~~~~~~~~~ 97 (391)
T 1l0q_A 45 KVYVANAHSNDVSIIDTATNNVIATVPAGS---------SPQ-------GVAVSPDGKQV-----------YVTNMASST 97 (391)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSS---------SEE-------EEEECTTSSEE-----------EEEETTTTE
T ss_pred EEEEECCCCCeEEEEECCCCeEEEEEECCC---------Ccc-------ceEECCCCCEE-----------EEEECCCCE
Confidence 66 666799999999999998877665532 233 78999999976 345667899
Q ss_pred eeeceeeeccccccccccceeeccccccceEEEEeCCCCCEE-EEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCC
Q 015363 207 LRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETF-ISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEV 284 (408)
Q Consensus 207 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 284 (408)
|++|| +... +....+ . +...+.+++|+|+++.+ +++ .++.|++||+.+ .+.... +.. ...
T Consensus 98 v~v~d-~~~~------~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~-------~~~-~~~ 159 (391)
T 1l0q_A 98 LSVID-TTSN------TVAGTV-K-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-KAVINT-------VSV-GRS 159 (391)
T ss_dssp EEEEE-TTTT------EEEEEE-E-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEE-------EEC-CSS
T ss_pred EEEEE-CCCC------eEEEEE-e-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEE-------Eec-CCC
Confidence 99999 4332 222222 2 33568999999999977 566 799999999984 444433 222 345
Q ss_pred eEEEEEcCCCCceE-EEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC---
Q 015363 285 ITSAEFHPTHCNML-AYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD--- 360 (408)
Q Consensus 285 v~~~~~~p~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--- 360 (408)
+.+++|+|++ +.+ ++++.++.|++||+++++.. ..+..+ ..+.+++|+|+|++|++++
T Consensus 160 ~~~~~~~~dg-~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~~-------------~~~~~~~~~~~g~~l~~~~~~~ 221 (391)
T 1l0q_A 160 PKGIAVTPDG-TKVYVANFDSMSISVIDTVTNSVI----DTVKVE-------------AAPSGIAVNPEGTKAYVTNVDK 221 (391)
T ss_dssp EEEEEECTTS-SEEEEEETTTTEEEEEETTTTEEE----EEEECS-------------SEEEEEEECTTSSEEEEEEECS
T ss_pred cceEEECCCC-CEEEEEeCCCCEEEEEECCCCeEE----EEEecC-------------CCccceEECCCCCEEEEEecCc
Confidence 6899999999 555 77788999999999988543 333322 5789999999999888763
Q ss_pred -CCeEEEEECCCCCCceeeeeecccc
Q 015363 361 -YMTLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 361 -d~~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
++.|++||+++ ++.+..+..|...
T Consensus 222 ~~~~v~~~d~~~-~~~~~~~~~~~~~ 246 (391)
T 1l0q_A 222 YFNTVSMIDTGT-NKITARIPVGPDP 246 (391)
T ss_dssp SCCEEEEEETTT-TEEEEEEECCSSE
T ss_pred CCCcEEEEECCC-CeEEEEEecCCCc
Confidence 59999999997 6888888877654
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=7.3e-25 Score=197.03 Aligned_cols=235 Identities=6% Similarity=-0.033 Sum_probs=150.3
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEec---cCCCCcccCCCCCeEeecCCceeeEEcc--------CCCeeeccccccc
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFD---WNVHPEKAAGNGPIFGSHVSAIPKSYMA--------NGGCGERNFGCAS 194 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------~~~~l~~~~~~~~ 194 (408)
+.++++++.|++|++||+++++...... ...+ .+.|. .++|+| +++.|
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH------~~~v~-------~v~~~p~~~~~~~~d~~~l-------- 159 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGH------HNFVN-------DIDIADVYSADNRLAEQVI-------- 159 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSC------SSCEE-------EEEEEEEECTTCSEEEEEE--------
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCC------CCceE-------EEEEccccccccCCCCCEE--------
Confidence 6689999999999999999887644321 1111 34455 788887 67776
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCC-EEEEe-cCCeEEEEeCCCCCceeeEee
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGE-TFISA-DDLRINLWNLEISNQSFNIVD 272 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~iwd~~~~~~~~~~~~ 272 (408)
++++.|++|++|| +... .+... ...|...+.+++|+|++. +|+++ .|++|++||+++.........
T Consensus 160 ----as~s~D~tv~~Wd-~~~~------~~~~~-~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~ 227 (393)
T 4gq1_A 160 ----ASVGDDCTLIIWR-LTDE------GPILA-GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ 227 (393)
T ss_dssp ----EEEETTSEEEEEE-EETT------EEEEE-EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-------
T ss_pred ----EEEECCCeEEEEE-CCCC------ceeee-ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc
Confidence 9999999999999 5432 22222 257788999999999874 78888 999999999986543322110
Q ss_pred cC-----------------CCcccCCcCCeEEEEEc-CCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCC--
Q 015363 273 VK-----------------PANMEDLTEVITSAEFH-PTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPG-- 332 (408)
Q Consensus 273 ~~-----------------~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-- 332 (408)
.. .....+|...+.++.|+ |++ ..+++++.|+++++||+..+... ..+..+....
T Consensus 228 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg-~~l~s~s~d~~i~vwd~~~~~~~----~~l~~~~~~~~~ 302 (393)
T 4gq1_A 228 TELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDG-SGILAMCKSGAWLRWNLFANNDY----NEISDSTMKLGP 302 (393)
T ss_dssp ---CSCCCSEEEESGGGC------CCSSSCSEEEEETTTT-CEEEEECTTSEEEEEEC----------------------
T ss_pred cCCcccceEEecccccceeeeecccccccceeeeeecCCC-CEEEEEeCCCCEEEEECccCCCC----ceEeeecCcccc
Confidence 00 01134677888999987 788 89999999999999999877543 2333221100
Q ss_pred ----Cc-cccccccceeEEEEEcc--CCCEEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeeeee
Q 015363 333 ----TR-SFFTEIIASISDIKFAR--NGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMGL 400 (408)
Q Consensus 333 ----~~-~~~~~h~~~i~~~~~sp--dg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (408)
+. .....+ .......|+| ++.++++|+ |+.|++||+.+ ++++..+.+|......++...++..++.
T Consensus 303 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~-~~~~~~~~~~~~~V~svafspdG~~LA~ 376 (393)
T 4gq1_A 303 KNLLPNVQGISLF-PSLLGACPHPRYMDYFATAHSQHGLIQLINTYE-KDSNSIPIQLGMPIVDFCWHQDGSHLAI 376 (393)
T ss_dssp -CCSCSEEEECSS-CCSSCCEECSSCTTEEEEEETTTTEEEEEETTC-TTCCEEEEECSSCEEEEEECTTSSEEEE
T ss_pred EEEcccccccccc-CcceeEEEccCCCCEEEEEECCCCEEEEEECCC-CcEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 00 000111 1122234444 445667776 69999999997 6888888888887777766666665544
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=3.5e-24 Score=189.91 Aligned_cols=202 Identities=14% Similarity=0.164 Sum_probs=129.0
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..|++++|+| +|++|++|+.|+ +++|++.+.+........... .+.+.+++..+
T Consensus 20 ~~V~~v~fs~--dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~------ 73 (355)
T 3vu4_A 20 NPVTDYEFNQ--DQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLS-----------------KVRMLHRTNYV------ 73 (355)
T ss_dssp CCCCEEEECT--TSSEEEEECSSE-EEEEEETTEEEEEEEECSCCC-----------------EEEECTTSSEE------
T ss_pred CceEEEEECC--CCCEEEEEcCCE-EEEEecCCcceeeeeecCCeE-----------------EEEEcCCCCEE------
Confidence 7799999965 488998888765 789999887665543332111 23444444332
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC---------------------------
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG--------------------------- 245 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--------------------------- 245 (408)
+++++.++.|++|| .... ++...+ .+...|.+++++++.
T Consensus 74 -----~~~~~~d~~v~iWd-~~~~------~~~~~~--~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 139 (355)
T 3vu4_A 74 -----AFVTGVKEVVHIWD-DVKK------QDVSRI--KVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRF 139 (355)
T ss_dssp -----EEECSSTTEEEEEE-TTTT------EEEEEE--ECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEE
T ss_pred -----EEEECCccEEEEEE-CCCC------cEEEEE--ECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccC
Confidence 23444455555555 2211 111111 122233334333321
Q ss_pred --------CEEEE--e-cCCeEEEEeCCCCCceee------EeecC--CCcccCCcCCeEEEEEcCCCCceEEEEeCCCe
Q 015363 246 --------ETFIS--A-DDLRINLWNLEISNQSFN------IVDVK--PANMEDLTEVITSAEFHPTHCNMLAYSSSKGS 306 (408)
Q Consensus 246 --------~~l~~--~-~d~~i~iwd~~~~~~~~~------~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 306 (408)
.+++. | .||.|++||++....... ...+. ...+.+|...|++++|+|++ .+|++|+.|++
T Consensus 140 ~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s~s~d~~ 218 (355)
T 3vu4_A 140 GGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGT 218 (355)
T ss_dssp EEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS-SEEEEEETTCS
T ss_pred CceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC-CEEEEEeCCCC
Confidence 34443 5 678888888874331000 00000 02367899999999999999 99999999998
Q ss_pred -EEEEEcCCCceecccccccc-c-ccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 307 -IRLIDMRQSALCDTHSKLFE-E-QEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 307 -i~iwd~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
|++||+++++.+ ..+. + | ...|.+++|+|+|++|++++ |++|++||++.
T Consensus 219 ~v~iwd~~~~~~~----~~~~~g~h------------~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 219 IIRVFKTEDGVLV----REFRRGLD------------RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEEEETTTCCEE----EEEECTTC------------CSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EEEEEECCCCcEE----EEEEcCCC------------CCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 999999998654 4554 3 4 57899999999999999985 69999999976
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2.3e-22 Score=181.88 Aligned_cols=252 Identities=10% Similarity=0.037 Sum_probs=179.9
Q ss_pred ceeeccceEEEEECC--------------CCCeEEEeecC------CeEEEEEeCCCCCCCCcccccccccccccCCCcc
Q 015363 31 EVQEVDIISAIEFDK--------------SGDHLATGDRG------GRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEF 90 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~--------------~~~~l~sg~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 90 (408)
...|...+..+++++ .+..++.++.+ +.|++||+++..
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~---------------------- 170 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN---------------------- 170 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS----------------------
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCC----------------------
Confidence 345667777776664 25667776654 799999987543
Q ss_pred ceeeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCC---eEEEEEcCCCcEEEEeccCCCCcccCCCCCe
Q 015363 91 RYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDK---TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPI 167 (408)
Q Consensus 91 ~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v 167 (408)
...+.+|. ..|.+++|+|+ |++|++++.|+ .|++||+.+++........ +.+
T Consensus 171 --~~~l~~~~------------~~v~~~~~Spd--g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~---------~~~ 225 (415)
T 2hqs_A 171 --QFVVHRSP------------QPLMSPAWSPD--GSKLAYVTFESGRSALVIQTLANGAVRQVASFP---------RHN 225 (415)
T ss_dssp --CEEEEEES------------SCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCEEEEECCS---------SCE
T ss_pred --CEEEeCCC------------CcceeeEEcCC--CCEEEEEEecCCCcEEEEEECCCCcEEEeecCC---------Ccc
Confidence 23566666 67999999755 88999999875 9999999998876543321 123
Q ss_pred EeecCCceeeEEccCCCeeecccccccCccccCCCCCc--eeeeceeeeccccccccccceeeccccccceEEEEeCCCC
Q 015363 168 FGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVS--SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG 245 (408)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 245 (408)
. .++|+|+|+.+ +++++.++ .|++|| +... .. .. +..|...+.+++|+|+|
T Consensus 226 ~-------~~~~spdg~~l-----------a~~~~~~g~~~i~~~d-~~~~------~~-~~-l~~~~~~~~~~~~spdg 278 (415)
T 2hqs_A 226 G-------APAFSPDGSKL-----------AFALSKTGSLNLYVMD-LASG------QI-RQ-VTDGRSNNTEPTWFPDS 278 (415)
T ss_dssp E-------EEEECTTSSEE-----------EEEECTTSSCEEEEEE-TTTC------CE-EE-CCCCSSCEEEEEECTTS
T ss_pred c-------CEEEcCCCCEE-----------EEEEecCCCceEEEEE-CCCC------CE-Ee-CcCCCCcccceEECCCC
Confidence 3 68999999977 23555544 488888 4321 11 22 35677889999999999
Q ss_pred CEEEEe-c-CC--eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC---CeEEEEEcCCCcee
Q 015363 246 ETFISA-D-DL--RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK---GSIRLIDMRQSALC 318 (408)
Q Consensus 246 ~~l~~~-~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~ 318 (408)
+.|+.+ . ++ .|.+||+.+.. ... +..+...+.+++|+|+| ++|++++.+ ..|++||+.+++.
T Consensus 279 ~~l~~~s~~~g~~~i~~~d~~~~~-~~~--------l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~~~d~~~~~~- 347 (415)
T 2hqs_A 279 QNLAFTSDQAGRPQVYKVNINGGA-PQR--------ITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIAKQDLATGGV- 347 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTSSC-CEE--------CCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEEEEETTTCCE-
T ss_pred CEEEEEECCCCCcEEEEEECCCCC-EEE--------EecCCCcccCeEECCCC-CEEEEEECcCCceEEEEEECCCCCE-
Confidence 988876 4 45 67777887433 222 34456678899999999 888877764 5899999998754
Q ss_pred cccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CC---eEEEEECCCCCCceeeeeeccccc
Q 015363 319 DTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YM---TLKLWDINMDSGPVATFQVHEHLR 386 (408)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~---~v~~wd~~~~~~~~~~~~~~~~~~ 386 (408)
..+..+ ..+.+++|+|||++|++++ ++ .|++||+. +..++.+..|.+..
T Consensus 348 ----~~l~~~-------------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~--g~~~~~l~~~~~~v 400 (415)
T 2hqs_A 348 ----QVLSST-------------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD--GRFKARLPATDGQV 400 (415)
T ss_dssp ----EECCCS-------------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT--SCCEEECCCSSSEE
T ss_pred ----EEecCC-------------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC--CCcEEEeeCCCCCC
Confidence 223333 2588999999999998874 43 79999986 57788888887653
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=4.1e-22 Score=169.39 Aligned_cols=176 Identities=10% Similarity=0.052 Sum_probs=113.3
Q ss_pred CCCceeeeceeeeccccccccccceeeccccccceEEEEeCC---CCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCc
Q 015363 202 GGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS---DGETFISA-DDLRINLWNLEISNQSFNIVDVKPAN 277 (408)
Q Consensus 202 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~---~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~ 277 (408)
+.++.|++|+ +... ++.... ...|...++.++|+| ++..|+++ .|++|+|||++++ +++..
T Consensus 154 g~d~~V~~~~-~s~d-----G~~~~s-~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG-k~l~t------- 218 (356)
T 2w18_A 154 LSDQQVEVMT-FAED-----GGGKEN-QFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG-QLLKK------- 218 (356)
T ss_dssp STTCEEEEEE-ECTT-----SCEEEE-EEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC-CEEEE-------
T ss_pred CCCCcEEEEE-ECCC-----Cceeee-eccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC-cEEEE-------
Confidence 3577777777 4221 111122 257778888999999 77999998 9999999999954 45444
Q ss_pred ccCC---cCCeEEEEEcCCCCceE------------EEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccc
Q 015363 278 MEDL---TEVITSAEFHPTHCNML------------AYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIA 342 (408)
Q Consensus 278 ~~~~---~~~v~~~~~~p~~~~~l------------~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 342 (408)
+.+| ...+.+++|+|+| .++ ++|+.|++|++||..+++.+ ..+.-. +..+|..
T Consensus 219 L~g~~~~v~~v~~vafSpdG-~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l----~v~~~~-------~p~Gh~~ 286 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSEMG-LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSV----GVMLYC-------LPPGQAG 286 (356)
T ss_dssp EECCC---CCCEEEEEEETT-EEEEEEC------------CCEEEEEEETTTTEEE----EEEEEC-------CCTTCCC
T ss_pred EcCCCcceeeeEEEEECCCC-CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEE----EEEEee-------ccCCCcc
Confidence 2332 3467888999999 765 66788999999999988654 222100 0012334
Q ss_pred eeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccc-cceEEecCCCeeee---eeceeeec
Q 015363 343 SISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHL-RPKVMHSSKNYFMG---LDNIHTLY 407 (408)
Q Consensus 343 ~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~d~~~~~~ 407 (408)
.+.+..+ ++.++++++ |++|+|||+.+ +++++++.+|... ...+...-++..++ .|+-.+||
T Consensus 287 ~~lsg~~--sg~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklW 353 (356)
T 2w18_A 287 RFLEGDV--KDHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVY 353 (356)
T ss_dssp CEEEEEE--ETTEEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred eeEcccc--CCCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEe
Confidence 4444444 488999985 79999999998 8999999999775 33343333344442 36555555
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=5.8e-21 Score=168.33 Aligned_cols=257 Identities=11% Similarity=0.131 Sum_probs=164.8
Q ss_pred ceeeccceEEEEECCCCCeEEEeecC-CeEEEEEeC--CCCCCCCcccccccccccccCCCccceeeeeccCCccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATGDRG-GRVVLFERT--DTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLK 107 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg~~d-g~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~ 107 (408)
...|...+.+++|+|+|++|++++.+ +.|.+|+++ ++.. +.+..+..+
T Consensus 33 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~---------------------~~~~~~~~~-------- 83 (343)
T 1ri6_A 33 VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL---------------------TFAAESALP-------- 83 (343)
T ss_dssp EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE---------------------EEEEEEECS--------
T ss_pred eEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce---------------------eeccccccC--------
Confidence 35677889999999999999888876 999999987 3321 122222222
Q ss_pred ccccccceeEEEEeecCCCcEEEEEe-CCCeEEEEEcCCC---cEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCC
Q 015363 108 SLEIEEKINKIRWCQSANSALYLLST-NDKTIKLWKVQEK---KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANG 183 (408)
Q Consensus 108 ~~~~~~~v~~v~~~p~~~~~~l~~~~-~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 183 (408)
..+..++|+|+ |+++++++ .++.|.+||+..+ +......... .+ ..++|+|+|
T Consensus 84 -----~~~~~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---------~~-------~~~~~s~dg 140 (343)
T 1ri6_A 84 -----GSLTHISTDHQ--GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD---------GC-------HSANISPDN 140 (343)
T ss_dssp -----SCCSEEEECTT--SSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT---------TB-------CCCEECTTS
T ss_pred -----CCCcEEEEcCC--CCEEEEEecCCCeEEEEECCCCccccccccccCCC---------Cc-------eEEEECCCC
Confidence 34889999654 77776665 5889999999533 3333322211 11 268999999
Q ss_pred CeeecccccccCccccCCC-CCceeeeceeeec-cccccccccceeeccccccceEEEEeCCCCCEEEE-e-cCCeEEEE
Q 015363 184 GCGERNFGCASNDSSFPPG-GVSSLRLPVVVTS-QETNLVAGCRRIYAHAHDYHINSISNNSDGETFIS-A-DDLRINLW 259 (408)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~iw 259 (408)
+.+ ++++ .++.|.+|+ +.. ........ ..........+..++|+|+++++++ + .++.|.+|
T Consensus 141 ~~l------------~~~~~~~~~v~~~d-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~ 205 (343)
T 1ri6_A 141 RTL------------WVPALKQDRICLFT-VSDDGHLVAQDP--AEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVW 205 (343)
T ss_dssp SEE------------EEEEGGGTEEEEEE-ECTTSCEEEEEE--EEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CEE------------EEecCCCCEEEEEE-ecCCCceeeecc--cccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 877 5544 789999999 543 21111000 0111223356888999999997654 4 79999999
Q ss_pred eCCCC-Cce--eeEeecCCCcccCCcCCeEEEEEcCCCCceEE-EEeCCCeEEEEEcCC--CceecccccccccccCCCC
Q 015363 260 NLEIS-NQS--FNIVDVKPANMEDLTEVITSAEFHPTHCNMLA-YSSSKGSIRLIDMRQ--SALCDTHSKLFEEQEAPGT 333 (408)
Q Consensus 260 d~~~~-~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~ 333 (408)
|++.. +.. ...+...+... .....+..++|+|++ ++|+ ++..++.|.+||+.. +.. +.+..+..+
T Consensus 206 ~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~i~~s~dg-~~l~v~~~~~~~i~v~d~~~~~~~~--~~~~~~~~~----- 276 (343)
T 1ri6_A 206 ELKDPHGNIECVQTLDMMPENF-SDTRWAADIHITPDG-RHLYACDRTASLITVFSVSEDGSVL--SKEGFQPTE----- 276 (343)
T ss_dssp ESSCTTSCCEEEEEEECSCTTC-CSCCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCCE--EEEEEEECS-----
T ss_pred EecCCCCcEEEEeeccccCccc-cccCCccceEECCCC-CEEEEEecCCCEEEEEEEcCCCCce--EEeeeecCC-----
Confidence 99632 221 12111111011 113457789999999 5555 555799999999983 221 111222222
Q ss_pred ccccccccceeEEEEEccCCCEEEEeC--CCeEEEEECCC
Q 015363 334 RSFFTEIIASISDIKFARNGRHILSRD--YMTLKLWDINM 371 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg~~l~s~~--d~~v~~wd~~~ 371 (408)
..+..++|+|+|++|++++ ++.|.+|+++.
T Consensus 277 --------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 277 --------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp --------SSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred --------CccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 2378899999999888774 59999996653
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=3.2e-21 Score=174.35 Aligned_cols=221 Identities=9% Similarity=0.055 Sum_probs=157.9
Q ss_pred cceeeccceEEEEECCCCCeEEEeecCC---eEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccc
Q 015363 30 EEVQEVDIISAIEFDKSGDHLATGDRGG---RVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYL 106 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~~~l~sg~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~ 106 (408)
....|.+.|.+++|+|+|++||+++.++ .|++||+.+++. ..+..|.
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~------------------------~~l~~~~------ 222 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV------------------------RQVASFP------ 222 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE------------------------EEEECCS------
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE------------------------EEeecCC------
Confidence 3456889999999999999999999885 999999987653 2345555
Q ss_pred cccccccceeEEEEeecCCCcEEE-EEeCCC--eEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCC
Q 015363 107 KSLEIEEKINKIRWCQSANSALYL-LSTNDK--TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANG 183 (408)
Q Consensus 107 ~~~~~~~~v~~v~~~p~~~~~~l~-~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 183 (408)
..+.+++|+|+ |++|+ +++.|+ .|++||+.+++....... .+.+. .+.|+|+|
T Consensus 223 ------~~~~~~~~spd--g~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~---------~~~~~-------~~~~spdg 278 (415)
T 2hqs_A 223 ------RHNGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASGQIRQVTDG---------RSNNT-------EPTWFPDS 278 (415)
T ss_dssp ------SCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCEEECCCC---------SSCEE-------EEEECTTS
T ss_pred ------CcccCEEEcCC--CCEEEEEEecCCCceEEEEECCCCCEEeCcCC---------CCccc-------ceEECCCC
Confidence 56999999755 88787 556555 499999998876433221 11233 68999999
Q ss_pred CeeecccccccCccccCCC-CCc--eeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-c---CCeE
Q 015363 184 GCGERNFGCASNDSSFPPG-GVS--SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-D---DLRI 256 (408)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~-~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~---d~~i 256 (408)
+.+ +.++ .++ .|.+|| +...+ ... +..+...+.+++|+|+|++|+.+ . +..|
T Consensus 279 ~~l------------~~~s~~~g~~~i~~~d-~~~~~-------~~~-l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i 337 (415)
T 2hqs_A 279 QNL------------AFTSDQAGRPQVYKVN-INGGA-------PQR-ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHI 337 (415)
T ss_dssp SEE------------EEEECTTSSCEEEEEE-TTSSC-------CEE-CCCSSSEEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred CEE------------EEEECCCCCcEEEEEE-CCCCC-------EEE-EecCCCcccCeEECCCCCEEEEEECcCCceEE
Confidence 987 4433 345 455556 32211 111 24455678899999999999887 4 3589
Q ss_pred EEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCC---eEEEEEcCCCceecccccccccccCCCC
Q 015363 257 NLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG---SIRLIDMRQSALCDTHSKLFEEQEAPGT 333 (408)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 333 (408)
.+||+.+. .... +..+. .+.+++|+|+| ++|++++.++ .|++||+..+.. ..+..+
T Consensus 338 ~~~d~~~~-~~~~--------l~~~~-~~~~~~~spdg-~~l~~~s~~~~~~~l~~~d~~g~~~-----~~l~~~----- 396 (415)
T 2hqs_A 338 AKQDLATG-GVQV--------LSSTF-LDETPSLAPNG-TMVIYSSSQGMGSVLNLVSTDGRFK-----ARLPAT----- 396 (415)
T ss_dssp EEEETTTC-CEEE--------CCCSS-SCEEEEECTTS-SEEEEEEEETTEEEEEEEETTSCCE-----EECCCS-----
T ss_pred EEEECCCC-CEEE--------ecCCC-CcCCeEEcCCC-CEEEEEEcCCCccEEEEEECCCCcE-----EEeeCC-----
Confidence 99999844 3322 33343 78999999999 8888887776 899999975532 445555
Q ss_pred ccccccccceeEEEEEccCC
Q 015363 334 RSFFTEIIASISDIKFARNG 353 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg 353 (408)
.+.|.+++|+|.-
T Consensus 397 -------~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 397 -------DGQVKFPAWSPYL 409 (415)
T ss_dssp -------SSEEEEEEECCCC
T ss_pred -------CCCCcCCcccccc
Confidence 4789999999953
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.6e-20 Score=174.98 Aligned_cols=259 Identities=10% Similarity=0.037 Sum_probs=179.5
Q ss_pred eEEEEECCCCCeEEEeecCCeEEEEEe--CCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 38 ISAIEFDKSGDHLATGDRGGRVVLFER--TDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 38 V~~~~~s~~~~~l~sg~~dg~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
+.+++|+|||++|++++.|++|++||+ .+++ .+..+..+ ..+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-----------------------~~~~i~~g-------------~~p 224 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-----------------------KVAEIKIG-------------IEA 224 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-----------------------EEEEEECC-------------SEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-----------------------EEEEEecC-------------CCc
Confidence 889999999999999999999999998 4443 23334422 447
Q ss_pred eEEEEee--cCCCcEEEEEe-CCCeEEEEEcCCCcEEEEeccCCCC---cccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 116 NKIRWCQ--SANSALYLLST-NDKTIKLWKVQEKKVKKVFDWNVHP---EKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 116 ~~v~~~p--~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..++|+| ..+|+++++++ .+++|.+||..+.+++..+...... ..+.+...+. .+.++|++..+
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~-------~i~~s~~~~~~--- 294 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA-------AIIASHEHPEF--- 294 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE-------EEEECSSSSEE---
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceE-------EEEECCCCCEE---
Confidence 8999975 00488998887 5899999999999888776653211 0011111233 67888887765
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCce
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQS 267 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~ 267 (408)
+++...++.|.+|| ....+... ... ..+...+..++|+|++++|+++ .+++|.+||..+ +++
T Consensus 295 --------~vs~~~~g~i~vvd-~~~~~~l~----~~~--i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l 358 (543)
T 1nir_A 295 --------IVNVKETGKVLLVN-YKDIDNLT----VTS--IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRL 358 (543)
T ss_dssp --------EEEETTTTEEEEEE-CTTSSSCE----EEE--EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEE
T ss_pred --------EEEECCCCeEEEEE-ecCCCcce----eEE--eccCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeE
Confidence 46778899999999 44322111 011 1344567889999999987655 689999999994 455
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe-CCCeEEEEEcCC-------CceecccccccccccCCCCcccccc
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS-SKGSIRLIDMRQ-------SALCDTHSKLFEEQEAPGTRSFFTE 339 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (408)
...++.. ...|......+ ++|++..+++++. .|++|.+||+.+ .+.+ +++.++
T Consensus 359 ~~~i~~g---~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v----~~l~~~----------- 419 (543)
T 1nir_A 359 SALVDVG---KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKV----AELQGQ----------- 419 (543)
T ss_dssp EEEEECS---SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE----EEEECS-----------
T ss_pred EEeeccC---CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEE----EEEEcC-----------
Confidence 5544321 12354433333 5787437778776 589999999988 4332 555555
Q ss_pred ccceeEEEEEccCCCEEEEeC--------CCeEEEEECCCCCCce-eee
Q 015363 340 IIASISDIKFARNGRHILSRD--------YMTLKLWDINMDSGPV-ATF 379 (408)
Q Consensus 340 h~~~i~~~~~spdg~~l~s~~--------d~~v~~wd~~~~~~~~-~~~ 379 (408)
...+..++|+|||++|++++ +++|.+||+.+ ++.. +.+
T Consensus 420 -g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~-~~~~~~~~ 466 (543)
T 1nir_A 420 -GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN-LDAKYQVL 466 (543)
T ss_dssp -CSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC-TTSCCEEE
T ss_pred -CCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC-CCCCeEEe
Confidence 35678899999999999985 47999999998 4555 443
No 131
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=2.9e-20 Score=164.37 Aligned_cols=287 Identities=7% Similarity=0.031 Sum_probs=171.4
Q ss_pred cccceeeecccCcCcccceeeccceEEEEECCCCCeEEEeec---CCeEEEEEeCCCCCCCCcccccccccccccCCCcc
Q 015363 14 PLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDR---GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEF 90 (408)
Q Consensus 14 ~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 90 (408)
-..|.+...-++........+...+..++|+|+|+ |++++. ++.|.+|++.++..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~--------------------- 75 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA--------------------- 75 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE---------------------
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE---------------------
Confidence 34566654222222223345667788999999999 555544 68999999976542
Q ss_pred ceeeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEe-CCCeEEEEEcC-CCcEEEEeccCCCCcccCCCCCeE
Q 015363 91 RYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLST-NDKTIKLWKVQ-EKKVKKVFDWNVHPEKAAGNGPIF 168 (408)
Q Consensus 91 ~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~-~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~v~ 168 (408)
+.+..+..+. ..+..++|+|+ |++|++++ .++.|.+|++. ++................+..
T Consensus 76 ~~~~~~~~~~------------~~p~~~a~spd--g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~--- 138 (347)
T 3hfq_A 76 HKLNTVVAPG------------TPPAYVAVDEA--RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQ--- 138 (347)
T ss_dssp EEEEEEEEES------------CCCSEEEEETT--TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTC---
T ss_pred EEeeeeecCC------------CCCEEEEECCC--CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccc---
Confidence 1223333343 55889999755 88888887 78999999996 343332222111000000000
Q ss_pred eecCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEE
Q 015363 169 GSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETF 248 (408)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 248 (408)
.......++++|+|+.+ ++...++.|.+|+ +..... . .....+.......+..++|+|+|+++
T Consensus 139 -~~~~~~~~~~spdg~l~------------v~~~~~~~v~~~~-~~~~g~-~--~~~~~~~~~~g~~p~~~~~spdg~~l 201 (347)
T 3hfq_A 139 -DGSHIHYTDLTPDNRLA------------VIDLGSDKVYVYN-VSDAGQ-L--SEQSVLTMEAGFGPRHLVFSPDGQYA 201 (347)
T ss_dssp -SSCCEEEEEECTTSCEE------------EEETTTTEEEEEE-ECTTSC-E--EEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred -cCCCceEEEECCCCcEE------------EEeCCCCEEEEEE-ECCCCc-E--EEeeeEEcCCCCCCceEEECCCCCEE
Confidence 00112268999999943 6667788999999 542111 0 01111111222357789999999966
Q ss_pred EE-e-cCCeEEEEeCCCC-Ccee--eEeecCCCcccCCcCCeEEEEEcCCCCceE-EEEeCCCeEEEEEcCCCceecccc
Q 015363 249 IS-A-DDLRINLWNLEIS-NQSF--NIVDVKPANMEDLTEVITSAEFHPTHCNML-AYSSSKGSIRLIDMRQSALCDTHS 322 (408)
Q Consensus 249 ~~-~-~d~~i~iwd~~~~-~~~~--~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~ 322 (408)
++ + .++.|.+|+++.. +... ..+...+.... ....+..++|+|+| ++| ++...++.|.+|++...... ..+
T Consensus 202 ~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~i~~spdG-~~l~v~~~~~~~v~v~~~~~~g~~-~~~ 278 (347)
T 3hfq_A 202 FLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYT-AHNGAAAIRLSHDG-HFLYVSNRGYNTLAVFAVTADGHL-TLI 278 (347)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC-SCCEEEEEEECTTS-CEEEEEEETTTEEEEEEECGGGCE-EEE
T ss_pred EEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCC-CCCcceeEEECCCC-CEEEEEeCCCCEEEEEEECCCCcE-EEe
Confidence 65 4 7899999998842 2221 11111111111 12457899999999 655 66667899999999733111 111
Q ss_pred cccccccCCCCccccccccceeEEEEEccCCCEEEEe-CC-CeEEEEECCC
Q 015363 323 KLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-DY-MTLKLWDINM 371 (408)
Q Consensus 323 ~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~d-~~v~~wd~~~ 371 (408)
..+..+ ...+..++|+|||++|+++ .+ +.|.+|+++.
T Consensus 279 ~~~~~~------------~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 279 QQISTE------------GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEECS------------SSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEecC------------CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 223222 2457899999999988877 34 8999996653
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.8e-21 Score=167.67 Aligned_cols=237 Identities=10% Similarity=0.070 Sum_probs=164.2
Q ss_pred cceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCC-CCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 30 EEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTD-TRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 30 ~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
....|...|.+++|+|+|++|++++ ++.|.+||+.+ ++. ......+..
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~-----------------------~~~~~~~~~------- 84 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP-----------------------EKVDTGFAT------- 84 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC-----------------------EECCCTTCC-------
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc-----------------------eEecccccc-------
Confidence 3456889999999999999999986 78999999987 542 122233321
Q ss_pred cccccceeEEEEeecCCCcEEEEEe--CCCeEEEEEc--CCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCC
Q 015363 109 LEIEEKINKIRWCQSANSALYLLST--NDKTIKLWKV--QEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG 184 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~--~d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 184 (408)
..|.+++|+|+ +++|++++ .++..++|.+ .+++....... ..+. .+.|+|+++
T Consensus 85 ----~~~~~~~~spd--g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------~~~~-------~~~~spdg~ 141 (297)
T 2ojh_A 85 ----ICNNDHGISPD--GALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN----------LPSY-------WHGWSPDGK 141 (297)
T ss_dssp ----CBCSCCEECTT--SSEEEEEECTTTSSCEEEEEETTCCCCEECCSS----------SSEE-------EEEECTTSS
T ss_pred ----ccccceEECCC--CCEEEEEEeCCCCcceEEEEECCCCceEEeecC----------CCcc-------ceEECCCCC
Confidence 45889999754 88999988 4445555554 45443222111 1122 578999999
Q ss_pred eeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCC
Q 015363 185 CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLE 262 (408)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~ 262 (408)
.+ ++++..++.+++|+ +..... .... +..+...+.+++|+|+++.|+.+ .++.+++|++.
T Consensus 142 ~l-----------~~~~~~~~~~~l~~-~~~~~~-----~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 142 SF-----------TYCGIRDQVFDIYS-MDIDSG-----VETR-LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp EE-----------EEEEEETTEEEEEE-EETTTC-----CEEE-CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EE-----------EEEECCCCceEEEE-EECCCC-----cceE-cccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 87 34677888899998 533211 1122 25566789999999999988765 58999999987
Q ss_pred CCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC-----------CeEEEEEcCCCceecccccccccccCC
Q 015363 263 ISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK-----------GSIRLIDMRQSALCDTHSKLFEEQEAP 331 (408)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~ 331 (408)
........ +..|...+..++|+|++ ++|++++.+ +.|.+||+.+++.. .+..+.++
T Consensus 204 ~~~~~~~~-------~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~~~~~~~~--- 270 (297)
T 2ojh_A 204 VDGSSVER-------ITDSAYGDWFPHPSPSG-DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE--TLFDLFGG--- 270 (297)
T ss_dssp TTSSCEEE-------CCCCSEEEEEEEECTTS-SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE--EEEEEEES---
T ss_pred CCCCCcEE-------EecCCcccCCeEECCCC-CEEEEEEcCCCCCcccccCceEEEEEecCCCCce--eeeccCCC---
Confidence 33333332 45567778999999999 888777765 56999999887542 11222233
Q ss_pred CCccccccccceeEEEEEccCCCEEEEeC
Q 015363 332 GTRSFFTEIIASISDIKFARNGRHILSRD 360 (408)
Q Consensus 332 ~~~~~~~~h~~~i~~~~~spdg~~l~s~~ 360 (408)
...+..++|+|+|++|++++
T Consensus 271 ---------~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 271 ---------QGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp ---------TTTSCSCCBCTTSSEEEEEE
T ss_pred ---------CcccccceECCCCCEEEEEE
Confidence 35688899999999998773
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=1.7e-20 Score=161.61 Aligned_cols=249 Identities=10% Similarity=0.075 Sum_probs=164.7
Q ss_pred EeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEEeecCCCcEEEE
Q 015363 52 TGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLL 131 (408)
Q Consensus 52 sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~ 131 (408)
.++.++.|++||+.+++. ..+..|. ..|.+++|+|+ |++|++
T Consensus 17 ~~~~~~~i~~~d~~~~~~------------------------~~~~~~~------------~~v~~~~~spd--g~~l~~ 58 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM------------------------RVVWQTP------------ELFEAPNWSPD--GKYLLL 58 (297)
T ss_dssp -CCCCEEEEEEETTTTEE------------------------EEEEEES------------SCCEEEEECTT--SSEEEE
T ss_pred CCCcceeEEEEeCCCCce------------------------eeeccCC------------cceEeeEECCC--CCEEEE
Confidence 456789999999887653 2344455 66999999755 888888
Q ss_pred EeCCCeEEEEEcCC-CcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCC--CCceee
Q 015363 132 STNDKTIKLWKVQE-KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPG--GVSSLR 208 (408)
Q Consensus 132 ~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~i~ 208 (408)
++ ++.|++||+.+ ++.......+.. ..+. .+.|+|+++.+ +.+. .++...
T Consensus 59 ~~-~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~-------~~~~spdg~~l------------~~~~~~~~~~~~ 111 (297)
T 2ojh_A 59 NS-EGLLYRLSLAGDPSPEKVDTGFAT-------ICNN-------DHGISPDGALY------------AISDKVEFGKSA 111 (297)
T ss_dssp EE-TTEEEEEESSSCCSCEECCCTTCC-------CBCS-------CCEECTTSSEE------------EEEECTTTSSCE
T ss_pred Ec-CCeEEEEeCCCCCCceEecccccc-------cccc-------ceEECCCCCEE------------EEEEeCCCCcce
Confidence 76 88999999998 776655433211 1122 58999999987 5544 445666
Q ss_pred eceeeeccccccccccceeeccccccceEEEEeCCCCCEEE-Ee-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeE
Q 015363 209 LPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFI-SA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVIT 286 (408)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 286 (408)
+|. +..... ....+ ..+ ..+..++|+|+++.|+ ++ .++.+++|+++........ +..+...+.
T Consensus 112 l~~-~~~~~~-----~~~~~-~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~ 176 (297)
T 2ojh_A 112 IYL-LPSTGG-----TPRLM-TKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR-------LTHGEGRND 176 (297)
T ss_dssp EEE-EETTCC-----CCEEC-CSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE-------CCCSSSCEE
T ss_pred EEE-EECCCC-----ceEEe-ecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE-------cccCCCccc
Confidence 666 322111 11121 222 3488899999999887 55 7899999997533332222 455677899
Q ss_pred EEEEcCCCCceEEEEe-CCCeEEEEEcCC-CceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-C--
Q 015363 287 SAEFHPTHCNMLAYSS-SKGSIRLIDMRQ-SALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-Y-- 361 (408)
Q Consensus 287 ~~~~~p~~~~~l~s~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d-- 361 (408)
+++|+|++ +.|++++ .++.+++|++.. +... ..+..+ ...+..++|+|+|++|++++ +
T Consensus 177 ~~~~s~dg-~~l~~~~~~~~~~~i~~~~~~~~~~----~~~~~~------------~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 177 GPDYSPDG-RWIYFNSSRTGQMQIWRVRVDGSSV----ERITDS------------AYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp EEEECTTS-SEEEEEECTTSSCEEEEEETTSSCE----EECCCC------------SEEEEEEEECTTSSEEEEEEEETT
T ss_pred cceECCCC-CEEEEEecCCCCccEEEECCCCCCc----EEEecC------------CcccCCeEECCCCCEEEEEEcCCC
Confidence 99999999 7666555 589999998863 2221 333333 36789999999999998763 3
Q ss_pred ---------CeEEEEECCCCCCce--eeeeecccccceEEecCCCeee
Q 015363 362 ---------MTLKLWDINMDSGPV--ATFQVHEHLRPKVMHSSKNYFM 398 (408)
Q Consensus 362 ---------~~v~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 398 (408)
+.|++||+.+ ++.. ..+.+|......+...-++..+
T Consensus 240 ~~~~~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~spdg~~l 286 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDG-GNVETLFDLFGGQGTMNSPNWSPDGDEF 286 (297)
T ss_dssp CCSCCSSEEEEEEEEETTS-CSCEEEEEEEESTTTSCSCCBCTTSSEE
T ss_pred CCcccccCceEEEEEecCC-CCceeeeccCCCCcccccceECCCCCEE
Confidence 4699999986 4553 3344666554444433344433
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=2.3e-20 Score=173.95 Aligned_cols=254 Identities=11% Similarity=0.113 Sum_probs=175.2
Q ss_pred EECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEEe
Q 015363 42 EFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWC 121 (408)
Q Consensus 42 ~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~ 121 (408)
+|+|++.++++++.|++|.+||..+++. +..+..+. . +..++|+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~-----------------------~~~i~~g~------------~-~~~v~~s 187 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKI-----------------------VKVIDTGY------------A-VHISRMS 187 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCE-----------------------EEEEECST------------T-EEEEEEC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceE-----------------------EEEEecCc------------c-cceEEEC
Confidence 3889999999999999999999887653 34454222 2 7889996
Q ss_pred ecCCCcEEEEEeCCCeEEEEEc--CCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc----CCCeeecccccccC
Q 015363 122 QSANSALYLLSTNDKTIKLWKV--QEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA----NGGCGERNFGCASN 195 (408)
Q Consensus 122 p~~~~~~l~~~~~d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~l~~~~~~~~~ 195 (408)
| +|+++++++.|++|++||+ .+++....+..... . ..++++| +|+.+
T Consensus 188 p--dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~---------p-------~~va~sp~~~~dg~~l--------- 240 (543)
T 1nir_A 188 A--SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE---------A-------RSVESSKFKGYEDRYT--------- 240 (543)
T ss_dssp T--TSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE---------E-------EEEEECCSTTCTTTEE---------
T ss_pred C--CCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCC---------c-------ceEEeCCCcCCCCCEE---------
Confidence 5 4889999999999999999 77776665543211 1 2689999 99987
Q ss_pred ccccCCC-CCceeeeceeeeccccccccccceeecc-c--------c-ccceEEEEeCCCCCEEEEe--cCCeEEEEeCC
Q 015363 196 DSSFPPG-GVSSLRLPVVVTSQETNLVAGCRRIYAH-A--------H-DYHINSISNNSDGETFISA--DDLRINLWNLE 262 (408)
Q Consensus 196 ~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~--------~-~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~ 262 (408)
++++ .++.|.+|| ... .++.+.+.. + | ...+..+.++|++..++.+ .++.|.+||+.
T Consensus 241 ---~v~~~~~~~v~v~D-~~t------~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~ 310 (543)
T 1nir_A 241 ---IAGAYWPPQFAIMD-GET------LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 310 (543)
T ss_dssp ---EEEEEESSEEEEEE-TTT------CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECT
T ss_pred ---EEEEccCCeEEEEe-ccc------cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEec
Confidence 6665 589999999 432 222222210 0 2 2378899999988766654 79999999998
Q ss_pred CCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEE-EEeCCCeEEEEEcCCCceecccccccccccCCCCcccccccc
Q 015363 263 ISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLA-YSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEII 341 (408)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 341 (408)
+.+.. .... + .+...+..+.|+|++ ++|+ ++..+++|.+||+.++++. ..+.... ..|.
T Consensus 311 ~~~~l-~~~~-----i-~~~~~~~~~~~spdg-~~l~va~~~~~~v~v~D~~tg~l~----~~i~~g~--------~ph~ 370 (543)
T 1nir_A 311 DIDNL-TVTS-----I-GAAPFLHDGGWDSSH-RYFMTAANNSNKVAVIDSKDRRLS----ALVDVGK--------TPHP 370 (543)
T ss_dssp TSSSC-EEEE-----E-ECCSSCCCEEECTTS-CEEEEEEGGGTEEEEEETTTTEEE----EEEECSS--------SBCC
T ss_pred CCCcc-eeEE-----e-ccCcCccCceECCCC-CEEEEEecCCCeEEEEECCCCeEE----EeeccCC--------CCCC
Confidence 54432 2111 1 234567789999999 6554 5556899999999998654 3333211 1122
Q ss_pred ceeEEEEEccC-CCEEEEe--CCCeEEEEECCCC------CCceeeeeecccccceE
Q 015363 342 ASISDIKFARN-GRHILSR--DYMTLKLWDINMD------SGPVATFQVHEHLRPKV 389 (408)
Q Consensus 342 ~~i~~~~~spd-g~~l~s~--~d~~v~~wd~~~~------~~~~~~~~~~~~~~~~~ 389 (408)
+....+ ++|+ |.+++++ +|++|.+||+++. .++++++.+|......+
T Consensus 371 g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v 426 (543)
T 1nir_A 371 GRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFI 426 (543)
T ss_dssp TTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE
T ss_pred CCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEE
Confidence 223233 5777 6677776 3699999999862 58889999886553333
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.5e-21 Score=177.06 Aligned_cols=230 Identities=9% Similarity=0.004 Sum_probs=151.3
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
+...++.+++++++.++++|+.++ ++||+....... ..... ......... ....+.+..
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~---~~~~~----------~~~~~~~~~-------~~~~~~~~~ 93 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQ---NKPGD----------DPNKIVDKV-------QGLLVPMKF 93 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCC---CCTTC----------CTTCEEECC-------CCEEECCSS
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhh---ccccc----------CcccccccC-------ccccccCCC
Confidence 345689999999999999999887 899886432110 00000 000000000 001112226
Q ss_pred ceeEEEEeecCCCcEEE----EEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 114 KINKIRWCQSANSALYL----LSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~----~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
.|.+++|+|+ |.+|+ +++.|++|++||+.+... ..... .+.
T Consensus 94 ~v~~l~~spd--g~~lav~~~sgs~d~~v~iwd~~~~~~-----~~~~~------------------------~~~---- 138 (434)
T 2oit_A 94 PIHHLALSCD--NLTLSACMMSSEYGSIIAFFDVRTFSN-----EAKQQ------------------------KRP---- 138 (434)
T ss_dssp CEEEEEECTT--SCEEEEEEEETTTEEEEEEEEHHHHHC-----TTCSS------------------------CCC----
T ss_pred cccEEEEcCC--CCEEEEEEeccCCCceEEEEEcccccc-----CCcCC------------------------cce----
Confidence 7999999755 88998 788999999999875410 00000 000
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCC-CCEEEEe-cCCeEEEEeCCCCCce
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSD-GETFISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~l~~~-~d~~i~iwd~~~~~~~ 267 (408)
+ ...+. ..+|...|++++|+|+ +.+|+++ .|++|++||+++....
T Consensus 139 -----------------~---------------~~~~~-~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~ 185 (434)
T 2oit_A 139 -----------------F---------------AYHKL-LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV 185 (434)
T ss_dssp -----------------S---------------EEEEC-CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE
T ss_pred -----------------e---------------eeeec-cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce
Confidence 0 00011 3578889999999998 7899998 9999999999955322
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDI 347 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 347 (408)
.. ..+|...|++++|+|+| .+|++|+.||.|++||++ +... ..+..+.. .-..|...|.++
T Consensus 186 ~~--------~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~-~~~~----~~~~~~~~-----~~~~~~~~v~~v 246 (434)
T 2oit_A 186 CA--------TLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT-LQEK----KVIPCPPF-----YESDHPVRVLDV 246 (434)
T ss_dssp EE--------EECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT-CCEE----EEECCCTT-----CCTTSCEEEEEE
T ss_pred ee--------ccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC-Cccc----ccccCCcc-----cCCCCceeEEEE
Confidence 22 34578899999999999 999999999999999998 4322 23333210 011234589999
Q ss_pred EEccCCCEEEEe--CCC------eEEEEECCC
Q 015363 348 KFARNGRHILSR--DYM------TLKLWDINM 371 (408)
Q Consensus 348 ~~spdg~~l~s~--~d~------~v~~wd~~~ 371 (408)
+|++++.++++. .+| .+++|++++
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 999999888654 232 399999986
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=4.8e-20 Score=161.74 Aligned_cols=261 Identities=9% Similarity=0.050 Sum_probs=166.1
Q ss_pred ccceEEEEECCCCCeEEEeec-CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDR-GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
...+ +++|+|+|++|++++. ++.|.+||..+++. ....+..+. .
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~----------------------~~~~~~~~~------------~ 84 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP----------------------KVVAIQEGQ------------S 84 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC----------------------EEEEEEECS------------S
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce----------------------eEEecccCC------------C
Confidence 4456 9999999997766655 88999999887652 022333343 3
Q ss_pred ceeEEEEeecCCCcEEEEEeCCC---eEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDK---TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
+..+++|+| +|++++++..++ .|.+||+.+++..........+ ..++|+|+|+.+
T Consensus 85 ~~~~~~~s~--dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~----------------~~~~~spdg~~l---- 142 (331)
T 3u4y_A 85 SMADVDITP--DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDA----------------VGIAISPNGNGL---- 142 (331)
T ss_dssp CCCCEEECT--TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTE----------------EEEEECTTSSCE----
T ss_pred CccceEECC--CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCc----------------cceEECCCCCEE----
Confidence 344499965 488888555553 9999999998877665443221 268999999876
Q ss_pred ccccCccccCCCCCce-eeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEE-e-cCCeEEEEeCCCCCce
Q 015363 191 GCASNDSSFPPGGVSS-LRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFIS-A-DDLRINLWNLEISNQS 267 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~-~-~d~~i~iwd~~~~~~~ 267 (408)
+++...++. |.+|+ +.......... ... .........++|+|++++++. + .++.|.+||+.+....
T Consensus 143 -------~~~~~~~~~~i~~~~-~~~~g~~~~~~-~~~--~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 211 (331)
T 3u4y_A 143 -------ILIDRSSANTVRRFK-IDADGVLFDTG-QEF--ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI 211 (331)
T ss_dssp -------EEEEETTTTEEEEEE-ECTTCCEEEEE-EEE--ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC
T ss_pred -------EEEecCCCceEEEEE-ECCCCcEeecC-Ccc--ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc
Confidence 244455577 99999 54322111111 111 123345789999999996655 4 6899999999854431
Q ss_pred --eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEE-eCCCeEEEEEcCCCceecccccccccccCCCCcccccccccee
Q 015363 268 --FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYS-SSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI 344 (408)
Q Consensus 268 --~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 344 (408)
... +. ....+..++|+|+| ++++++ ..++.|.+||+.+++... +..+...-.. ........
T Consensus 212 ~~~~~-------~~-~~~~~~~~~~spdg-~~l~v~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~-----~~~~~~~~ 275 (331)
T 3u4y_A 212 TLLNA-------VG-TNNLPGTIVVSRDG-STVYVLTESTVDVFNFNQLSGTLSF--VKSFGHGLLI-----DPRPLFGA 275 (331)
T ss_dssp EEEEE-------EE-CSSCCCCEEECTTS-SEEEEECSSEEEEEEEETTTTEEEE--EEEEECCCCC-----CCGGGTTC
T ss_pred ceeee-------cc-CCCCCceEEECCCC-CEEEEEEcCCCEEEEEECCCCceee--eccccccccc-----CCCCcccc
Confidence 222 22 23556789999999 655444 457899999999886510 1111111000 00001223
Q ss_pred EEEEEccCCCEEEEe-CC-CeEEEEECCCCCCceeeeee
Q 015363 345 SDIKFARNGRHILSR-DY-MTLKLWDINMDSGPVATFQV 381 (408)
Q Consensus 345 ~~~~~spdg~~l~s~-~d-~~v~~wd~~~~~~~~~~~~~ 381 (408)
..++|+|||++|+++ .+ +.|.+||+.. +.+..+.+
T Consensus 276 ~~~~~spdg~~l~v~~~~~~~v~v~d~~~--~~~~~~~~ 312 (331)
T 3u4y_A 276 NQMALNKTETKLFISANISRELKVFTISG--KVVGYVAG 312 (331)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETTS--CEEEECTT
T ss_pred cceEECCCCCEEEEecCCCCcEEEEEecC--Ccccceec
Confidence 568999999988755 44 8999999975 44444433
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=9.4e-21 Score=184.64 Aligned_cols=283 Identities=10% Similarity=0.075 Sum_probs=172.0
Q ss_pred ccceEEEEECCCCCeEEEeec-CC-----eEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDR-GG-----RVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~-dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
...|.+++|||||++|++++. |+ .|++||+.+++.. +.+..... .|+.+.+.. . .........
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~----~~~~~~~~----~~~~~~~~~-~--~~~~~~~~~ 104 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR----LLVDSKVV----LPGTETLSD-E--EKARRERQR 104 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE----EEECGGGT----C---------------------
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee----Eccchhhc----ccccccccc-h--hhhhhhhhh
Confidence 456899999999999999998 88 8999999877531 00000000 000000000 0 000000000
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC---cEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEK---KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
......|.+++|+|+ |++|++++. +.|++||+.++ +....... .+.+. .+.|+|||+.
T Consensus 105 ~~~~~~v~~~~~SpD--g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~---------~~~~~-------~~~~SPDG~~ 165 (741)
T 2ecf_A 105 IAAMTGIVDYQWSPD--AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG---------EGFAT-------DAKLSPKGGF 165 (741)
T ss_dssp --CCEESCCCEECTT--SSEEEEEET-TEEEEEESSSCSTTSCCBCCCS---------SSCEE-------EEEECTTSSE
T ss_pred hccccCcceeEECCC--CCEEEEEeC-CcEEEEECCCCCcceEEEcccC---------Ccccc-------cccCCCCCCE
Confidence 000034789999654 889998886 99999999987 44322111 12233 6899999998
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeecccccc----------------ceEEEEeCCCCCEEE
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDY----------------HINSISNNSDGETFI 249 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~v~~i~~~~~~~~l~ 249 (408)
+ +.++ ++.|.+|+ +..... .+. ...+.. .+..++|+|||+.|+
T Consensus 166 l------------a~~~-~~~i~~~d-~~~g~~------~~~-~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~ 224 (741)
T 2ecf_A 166 V------------SFIR-GRNLWVID-LASGRQ------MQL-TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIA 224 (741)
T ss_dssp E------------EEEE-TTEEEEEE-TTTTEE------EEC-CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEE
T ss_pred E------------EEEe-CCcEEEEe-cCCCCE------EEe-ccCCccceeccccceeeeeccccccceEECCCCCEEE
Confidence 7 4443 45899998 433211 111 111111 247799999999998
Q ss_pred Ee-cCC---------------------------------eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCC
Q 015363 250 SA-DDL---------------------------------RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHC 295 (408)
Q Consensus 250 ~~-~d~---------------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 295 (408)
++ .|+ .|.+||+.+.+....+. ....|...+..++| |+|
T Consensus 225 ~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~-pDg- 297 (741)
T 2ecf_A 225 YARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWID-----LGKEQDIYLARVNW-RDP- 297 (741)
T ss_dssp EEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEEC-----CCSCSSEEEEEEEE-EET-
T ss_pred EEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEec-----CCCCcceEEEEEEe-CCC-
Confidence 87 544 78889988403333221 01246778999999 999
Q ss_pred ceEEEEeC-----CCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEEC
Q 015363 296 NMLAYSSS-----KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDI 369 (408)
Q Consensus 296 ~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~ 369 (408)
+.|++++. +..|++||+.+++.. ..+..+.. +....+..++|+|||+++++++ ++.+.||.+
T Consensus 298 ~~l~~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~~~~--------~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 298 QHLSFQRQSRDQKKLDLVEVTLASNQQR----VLAHETSP--------TWVPLHNSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp TEEEEEEEETTSSEEEEEEEETTTCCEE----EEEEEECS--------SCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred CEEEEEEecccCCeEEEEEEECCCCceE----EEEEcCCC--------CcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence 77776653 568999999988643 33333310 0001345789999999888875 587888877
Q ss_pred CCCCCceeeeeecccccce
Q 015363 370 NMDSGPVATFQVHEHLRPK 388 (408)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~ 388 (408)
+..+. ...+..|......
T Consensus 366 ~~~~~-~~~l~~~~~~v~~ 383 (741)
T 2ecf_A 366 DSKGK-AAALTHGNWSVDE 383 (741)
T ss_dssp CSSSC-EEESCCSSSCEEE
T ss_pred cCCCC-eeeeeecceEEEe
Confidence 64455 7777776554433
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=2.1e-19 Score=159.11 Aligned_cols=265 Identities=9% Similarity=0.054 Sum_probs=177.9
Q ss_pred eeeccceEEEEECCCCCeEEEeec-------CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDR-------GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFD 104 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~ 104 (408)
......+..++|+|++++|++++. ++.|.+||..+++. ...+...
T Consensus 37 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~-----------------------~~~~~~~----- 88 (353)
T 3vgz_A 37 KAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV-----------------------TQAIHND----- 88 (353)
T ss_dssp EEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE-----------------------EEEEEES-----
T ss_pred hhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE-----------------------EEEEecC-----
Confidence 345567889999999998888774 56899999877653 2222221
Q ss_pred cccccccccceeEEEEeecCCCcEEEE-EeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCC
Q 015363 105 YLKSLEIEEKINKIRWCQSANSALYLL-STNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANG 183 (408)
Q Consensus 105 ~~~~~~~~~~v~~v~~~p~~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 183 (408)
..+..++|+|+ |+++++ ...++.|.+||..+++....+......... .... ..+..+.++|+|
T Consensus 89 --------~~~~~~~~s~d--g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~s~dg 152 (353)
T 3vgz_A 89 --------LKPFGATINNT--TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTE-EVRP-----LQPRELVADDAT 152 (353)
T ss_dssp --------SCCCSEEEETT--TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCS-SCCC-----CEEEEEEEETTT
T ss_pred --------CCcceEEECCC--CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcccc-ccCC-----CCCceEEECCCC
Confidence 33778999754 775544 556899999999999887766553211000 0000 011268999999
Q ss_pred CeeecccccccCccccCC--CCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEe
Q 015363 184 GCGERNFGCASNDSSFPP--GGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWN 260 (408)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd 260 (408)
+.+ +.+ +.++.|.+|| ... .+....+ ..+...+.+++|+|+++.++++ .++.|.+||
T Consensus 153 ~~l------------~~~~~~~~~~i~~~d-~~~------~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d 212 (353)
T 3vgz_A 153 NTV------------YISGIGKESVIWVVD-GGN------IKLKTAI-QNTGKMSTGLALDSEGKRLYTTNADGELITID 212 (353)
T ss_dssp TEE------------EEEEESSSCEEEEEE-TTT------TEEEEEE-CCCCTTCCCCEEETTTTEEEEECTTSEEEEEE
T ss_pred CEE------------EEEecCCCceEEEEc-CCC------CceEEEe-cCCCCccceEEECCCCCEEEEEcCCCeEEEEE
Confidence 976 443 3578899999 432 2222222 3244557889999999999988 899999999
Q ss_pred CCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEE-eCCCeEEEEEcCCCceecccccccccccCCCCcccccc
Q 015363 261 LEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYS-SSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTE 339 (408)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (408)
..+ .+....+.. ...++...+..++|+|++ +.++++ ..++.|.+||+.+++.. ..+...
T Consensus 213 ~~~-~~~~~~~~~---~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~~----------- 272 (353)
T 3vgz_A 213 TAD-NKILSRKKL---LDDGKEHFFINISLDTAR-QRAFITDSKAAEVLVVDTRNGNIL----AKVAAP----------- 272 (353)
T ss_dssp TTT-TEEEEEEEC---CCSSSCCCEEEEEEETTT-TEEEEEESSSSEEEEEETTTCCEE----EEEECS-----------
T ss_pred CCC-CeEEEEEEc---CCCCCCcccceEEECCCC-CEEEEEeCCCCEEEEEECCCCcEE----EEEEcC-----------
Confidence 984 444433321 112345567899999999 655444 45699999999988654 333322
Q ss_pred ccceeEEEEEccCCCEEEEe-C-CCeEEEEECCCCCCceeeeeeccc
Q 015363 340 IIASISDIKFARNGRHILSR-D-YMTLKLWDINMDSGPVATFQVHEH 384 (408)
Q Consensus 340 h~~~i~~~~~spdg~~l~s~-~-d~~v~~wd~~~~~~~~~~~~~~~~ 384 (408)
. ...++|+|+|++|+.+ . ++.|.+||+.+ ++.+..+.....
T Consensus 273 --~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~ 315 (353)
T 3vgz_A 273 --E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKS-YKVVKTFDTPTH 315 (353)
T ss_dssp --S-CCCEEEETTTTEEEEEETTTTEEEEEETTT-TEEEEEEECCSE
T ss_pred --C-CceEEECCCCCEEEEEECCCCeEEEEECCC-CeEEEEEecCCC
Confidence 1 2468999999966654 3 59999999987 687777766543
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=7.7e-19 Score=154.05 Aligned_cols=240 Identities=8% Similarity=0.060 Sum_probs=157.4
Q ss_pred EECCCCC-eEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEE
Q 015363 42 EFDKSGD-HLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRW 120 (408)
Q Consensus 42 ~~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~ 120 (408)
.|.+++. .+++++.++.|.+||..+++. ...+..+. ..+ .++|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~-----------------------~~~~~~~~------------~~~-~~~~ 47 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEI-----------------------LNQITLGY------------DFV-DTAI 47 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCE-----------------------EEEEECCC------------CEE-EEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccce-----------------------eeeEEccC------------Ccc-eEEE
Confidence 4555544 577888899999999887753 22333333 446 8999
Q ss_pred eecCCCcEEEEEe-CCCeEEEEEcCCCcE-EEEeccCCCCcccCCCCCeEeecCCcee-eEEccCCCeeecccccccCcc
Q 015363 121 CQSANSALYLLST-NDKTIKLWKVQEKKV-KKVFDWNVHPEKAAGNGPIFGSHVSAIP-KSYMANGGCGERNFGCASNDS 197 (408)
Q Consensus 121 ~p~~~~~~l~~~~-~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~ 197 (408)
+|+ |+++++++ .++.|.+||+.+++. .........+ .. ++++|+|+.+
T Consensus 48 s~d--g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~----------------~~~~~~s~dg~~l----------- 98 (331)
T 3u4y_A 48 TSD--CSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS----------------MADVDITPDDQFA----------- 98 (331)
T ss_dssp CSS--SCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC----------------CCCEEECTTSSEE-----------
T ss_pred cCC--CCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC----------------ccceEECCCCCEE-----------
Confidence 655 77666665 489999999998876 4444333221 14 8999999987
Q ss_pred ccCCCCC-c--eeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCe-EEEEeCCCCCceeeEe
Q 015363 198 SFPPGGV-S--SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLR-INLWNLEISNQSFNIV 271 (408)
Q Consensus 198 ~~~~~~~-~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~-i~iwd~~~~~~~~~~~ 271 (408)
++...+ + .|.+|| +... +....+ .......+++|+|+|++++++ .++. |.+|++...+......
T Consensus 99 -~~~~~~~~~~~i~v~d-~~~~------~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~ 168 (331)
T 3u4y_A 99 -VTVTGLNHPFNMQSYS-FLKN------KFISTI--PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG 168 (331)
T ss_dssp -EECCCSSSSCEEEEEE-TTTT------EEEEEE--ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred -EEecCCCCcccEEEEE-CCCC------CeEEEE--ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC
Confidence 544444 3 899999 4322 222222 223456899999999866554 5677 9999998544432221
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEcc
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFAR 351 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 351 (408)
. . .......+..++|+|++..+++++..++.|.+||+.+++.. ..+..+... ..+..++|+|
T Consensus 169 -~--~-~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~~-------------~~~~~~~~sp 230 (331)
T 3u4y_A 169 -Q--E-FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-TLLNAVGTN-------------NLPGTIVVSR 230 (331)
T ss_dssp -E--E-EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-EEEEEEECS-------------SCCCCEEECT
T ss_pred -C--c-cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-ceeeeccCC-------------CCCceEEECC
Confidence 0 0 11234457899999999335555557899999999987641 011333333 4567899999
Q ss_pred CCCEEEEe-C-CCeEEEEECCCCCCc
Q 015363 352 NGRHILSR-D-YMTLKLWDINMDSGP 375 (408)
Q Consensus 352 dg~~l~s~-~-d~~v~~wd~~~~~~~ 375 (408)
||++|+.+ . ++.|.+||+.+ ++.
T Consensus 231 dg~~l~v~~~~~~~i~~~d~~~-~~~ 255 (331)
T 3u4y_A 231 DGSTVYVLTESTVDVFNFNQLS-GTL 255 (331)
T ss_dssp TSSEEEEECSSEEEEEEEETTT-TEE
T ss_pred CCCEEEEEEcCCCEEEEEECCC-Cce
Confidence 99987765 3 48999999987 555
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=1.6e-18 Score=154.07 Aligned_cols=265 Identities=10% Similarity=0.040 Sum_probs=161.9
Q ss_pred eccceEEEEECCCCCeEEEeecC----CeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRG----GRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
+...+..++|+|+|++|++++.+ +.|.+|+++.... ..+.+.....+.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g-------------------~~~~~~~~~~~~--------- 99 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG-------------------TLHLLNTQKTMG--------- 99 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT-------------------EEEEEEEEECSS---------
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC-------------------cEEEeeEeccCC---------
Confidence 67778889999999999998875 7999999875311 111222233232
Q ss_pred ccccceeEEEEeecCCCcEEEEEe-CCCeEEEEEcCCCcEEE----EeccCCCCc--ccCCCCCeEeecCCceeeEEccC
Q 015363 110 EIEEKINKIRWCQSANSALYLLST-NDKTIKLWKVQEKKVKK----VFDWNVHPE--KAAGNGPIFGSHVSAIPKSYMAN 182 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~-~d~~i~vwd~~~~~~~~----~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~ 182 (408)
.....+++ +++++++++ .++.|.+|++....... ......... ...... ....++|+|+
T Consensus 100 ---~~p~~~~~----dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~spd 165 (361)
T 3scy_A 100 ---ADPCYLTT----NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMP-------HLHCVRITPD 165 (361)
T ss_dssp ---SCEEEEEE----CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSC-------CEEEEEECTT
T ss_pred ---CCcEEEEE----CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCC-------cceEEEECCC
Confidence 33666666 366776665 68899999997532211 111110000 000001 1125899999
Q ss_pred CCeeecccccccCccccCCCCCceeeeceeeecccc----c-cccc-cceeeccccccceEEEEeCCCCCEEEEe--cCC
Q 015363 183 GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQET----N-LVAG-CRRIYAHAHDYHINSISNNSDGETFISA--DDL 254 (408)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~-~~~~-~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~ 254 (408)
|+.+ +++...++.|.+|+ +..... . .... ........+...++.++|+|+|++++++ .++
T Consensus 166 g~~l-----------~~~~~~~~~v~v~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 166 GKYL-----------LADDLGTDQIHKFN-INPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp SSEE-----------EEEETTTTEEEEEE-ECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred CCEE-----------EEEeCCCCEEEEEE-EcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 9976 24555688999998 543221 0 0000 0011112334567899999999977765 689
Q ss_pred eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeC--CCeEEEEEcC--CCceecccccccccccC
Q 015363 255 RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSS--KGSIRLIDMR--QSALCDTHSKLFEEQEA 330 (408)
Q Consensus 255 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~--~~~~~~~~~~~~~~~~~ 330 (408)
.|.+||+. .+.......+ .....+......++|+|+| ++|+++.. ++.|.+|++. +++.. .+..+..
T Consensus 234 ~v~v~~~~-~g~~~~~~~~--~~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~~i~v~~~~~~~g~~~--~~~~~~~--- 304 (361)
T 3scy_A 234 TVIAFRYA-DGMLDEIQTV--AADTVNAQGSGDIHLSPDG-KYLYASNRLKADGVAIFKVDETNGTLT--KVGYQLT--- 304 (361)
T ss_dssp EEEEEEEE-TTEEEEEEEE--ESCSSCCCCEEEEEECTTS-SEEEEEECSSSCEEEEEEECTTTCCEE--EEEEEEC---
T ss_pred eEEEEEec-CCceEEeEEE--ecCCCCCCCcccEEECCCC-CEEEEECCCCCCEEEEEEEcCCCCcEE--EeeEecC---
Confidence 99999998 3333222111 1123344557899999999 76655554 5899999996 33321 1122221
Q ss_pred CCCccccccccceeEEEEEccCCCEEEEeC--CCeEEEEECCC
Q 015363 331 PGTRSFFTEIIASISDIKFARNGRHILSRD--YMTLKLWDINM 371 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--d~~v~~wd~~~ 371 (408)
...+.+++|+|||++|++++ ++.|.+|+++.
T Consensus 305 ----------g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 305 ----------GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp ----------SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred ----------CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 13577899999999888874 49999976653
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=5.8e-20 Score=179.04 Aligned_cols=273 Identities=8% Similarity=0.023 Sum_probs=169.2
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCC---CCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDT---RDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
..|.+++|||||++|++++. +.|++||+.++ .. ..+..|.
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~------------------------~~l~~~~------------ 151 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV------------------------RQLTHGE------------ 151 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC------------------------CBCCCSS------------
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE------------------------EEcccCC------------
Confidence 34889999999999999886 89999999876 32 2344454
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEee-cCCceeeEEccCCCeeecccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGS-HVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~l~~~~~ 191 (408)
..+.+++|+|+ |++|++++ ++.|++||+.+++...................+... ......++|+|||+.|.....
T Consensus 152 ~~~~~~~~SPD--G~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 152 GFATDAKLSPK--GGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp SCEEEEEECTT--SSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred cccccccCCCC--CCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 56999999755 88898887 469999999988766544332110000000000000 001126899999998743211
Q ss_pred cccC-------------------ccccCCCCCc--eeeeceeeec-cccccccccceeec-cccccceEEEEeCCCCCEE
Q 015363 192 CASN-------------------DSSFPPGGVS--SLRLPVVVTS-QETNLVAGCRRIYA-HAHDYHINSISNNSDGETF 248 (408)
Q Consensus 192 ~~~~-------------------~~~~~~~~~~--~i~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l 248 (408)
.... .+-..+..+. .|.+|| +.. .+ ...... ..|...+..++| |||+.|
T Consensus 229 d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d-~~~~~~------~~~~~~~~~~~~~~~~~~~-pDg~~l 300 (741)
T 2ecf_A 229 DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS-PAEQAQ------TQWIDLGKEQDIYLARVNW-RDPQHL 300 (741)
T ss_dssp ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC-SSTTCC------CEEECCCSCSSEEEEEEEE-EETTEE
T ss_pred cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE-CCCCCc------eEEecCCCCcceEEEEEEe-CCCCEE
Confidence 1000 0001111122 566666 322 21 111111 146778999999 999999
Q ss_pred EEe-c-----CCeEEEEeCCCCCceeeEeecCCCcccCCc-C---CeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee
Q 015363 249 ISA-D-----DLRINLWNLEISNQSFNIVDVKPANMEDLT-E---VITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 249 ~~~-~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~---~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
+.+ . +..|++||+.++ ....+. ..+. . .+..++|+|+| +++++++.|+.++||.+......
T Consensus 301 ~~~~~~~~~~~~~i~~~d~~~g-~~~~~~-------~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~~~~~~~ 371 (741)
T 2ecf_A 301 SFQRQSRDQKKLDLVEVTLASN-QQRVLA-------HETSPTWVPLHNSLRFLDDG-SILWSSERTGFQHLYRIDSKGKA 371 (741)
T ss_dssp EEEEEETTSSEEEEEEEETTTC-CEEEEE-------EEECSSCCCCCSCCEECTTS-CEEEEECTTSSCEEEEECSSSCE
T ss_pred EEEEecccCCeEEEEEEECCCC-ceEEEE-------EcCCCCcCCcCCceEECCCC-eEEEEecCCCccEEEEEcCCCCe
Confidence 865 2 568999999854 343332 1122 1 34578999999 78899999998888876522112
Q ss_pred cccccccccccCCCCccccccccceeEEE-EEccCCCEEEE-eC-CC--eEEEEECCCCCCceeeeee
Q 015363 319 DTHSKLFEEQEAPGTRSFFTEIIASISDI-KFARNGRHILS-RD-YM--TLKLWDINMDSGPVATFQV 381 (408)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~h~~~i~~~-~~spdg~~l~s-~~-d~--~v~~wd~~~~~~~~~~~~~ 381 (408)
..+..+ ...|..+ .|+|||+.|+. ++ ++ .++||+++..+...+.+..
T Consensus 372 ----~~l~~~------------~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 372 ----AALTHG------------NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK 423 (741)
T ss_dssp ----EESCCS------------SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC
T ss_pred ----eeeeec------------ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc
Confidence 344433 2467776 59999997764 44 34 8999999765665666655
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=7.6e-19 Score=154.32 Aligned_cols=246 Identities=9% Similarity=0.063 Sum_probs=164.4
Q ss_pred CeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeec-cCCccccccccccccc-ceeEEEEeecCC
Q 015363 48 DHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQ-SHEPEFDYLKSLEIEE-KINKIRWCQSAN 125 (408)
Q Consensus 48 ~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~h~~~~~~~~~~~~~~-~v~~v~~~p~~~ 125 (408)
++|++++.++.|.+||..+++. ...+. ++. . .+..++|+|+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~-----------------------~~~~~~~~~------------~~~~~~~~~s~d-- 44 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV-----------------------DKVITIADA------------GPTPMVPMVAPG-- 44 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE-----------------------EEEEECTTC------------TTCCCCEEECTT--
T ss_pred cEEEEcCCCCeEEEEECCCCcE-----------------------EEEEEcCCC------------CCCccceEEcCC--
Confidence 4789999999999999877642 22222 221 1 3788999654
Q ss_pred CcEE-EEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCC--
Q 015363 126 SALY-LLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPG-- 202 (408)
Q Consensus 126 ~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-- 202 (408)
|+.+ +++..++.|.+||+.+++....+....... ....+..+.++|+|+.+ +++.
T Consensus 45 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~dg~~l------------~~~~~~ 102 (337)
T 1pby_B 45 GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE----------RVKSLFGAALSPDGKTL------------AIYESP 102 (337)
T ss_dssp SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE----------EEECTTCEEECTTSSEE------------EEEEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc----------ccccccceEECCCCCEE------------EEEecc
Confidence 7655 555678999999999988776554422000 00012268899999887 4443
Q ss_pred ----------CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEee
Q 015363 203 ----------GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVD 272 (408)
Q Consensus 203 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~ 272 (408)
.++.|.+|| +... +....+ . ....+.+++|+|++++|+++ ++.|.+||+.+. +....+.
T Consensus 103 ~~~~~~~~~~~~~~i~v~d-~~~~------~~~~~~-~-~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~-~~~~~~~ 171 (337)
T 1pby_B 103 VRLELTHFEVQPTRVALYD-AETL------SRRKAF-E-APRQITMLAWARDGSKLYGL-GRDLHVMDPEAG-TLVEDKP 171 (337)
T ss_dssp EEECSSCEEECCCEEEEEE-TTTT------EEEEEE-E-CCSSCCCEEECTTSSCEEEE-SSSEEEEETTTT-EEEEEEC
T ss_pred cccccccccccCceEEEEE-CCCC------cEEEEE-e-CCCCcceeEECCCCCEEEEe-CCeEEEEECCCC-cEeeeee
Confidence 578999999 4321 122222 1 13457788999999988877 678999999843 3332222
Q ss_pred cCC--C--c-------------------------------------------------------ccCCcCCeEEEEEcCC
Q 015363 273 VKP--A--N-------------------------------------------------------MEDLTEVITSAEFHPT 293 (408)
Q Consensus 273 ~~~--~--~-------------------------------------------------------~~~~~~~v~~~~~~p~ 293 (408)
... . . +..+...+.+++|+|+
T Consensus 172 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d 251 (337)
T 1pby_B 172 IQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPA 251 (337)
T ss_dssp STTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTT
T ss_pred ccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCC
Confidence 110 0 0 0112234567999999
Q ss_pred CCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCC
Q 015363 294 HCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMD 372 (408)
Q Consensus 294 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~ 372 (408)
+ ++++++ ++.|.+||+.+++.. ..+... ..+.+++|+|||++|++++ ++.|.+||+.+
T Consensus 252 g-~~l~~~--~~~v~~~d~~~~~~~----~~~~~~-------------~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~- 310 (337)
T 1pby_B 252 K-TRAFGA--YNVLESFDLEKNASI----KRVPLP-------------HSYYSVNVSTDGSTVWLGGALGDLAAYDAET- 310 (337)
T ss_dssp S-SEEEEE--ESEEEEEETTTTEEE----EEEECS-------------SCCCEEEECTTSCEEEEESBSSEEEEEETTT-
T ss_pred C-CEEEEe--CCeEEEEECCCCcCc----ceecCC-------------CceeeEEECCCCCEEEEEcCCCcEEEEECcC-
Confidence 9 777777 799999999987654 333322 3567899999999888875 69999999997
Q ss_pred CCceeeeeeccc
Q 015363 373 SGPVATFQVHEH 384 (408)
Q Consensus 373 ~~~~~~~~~~~~ 384 (408)
++.+..+..+..
T Consensus 311 ~~~~~~~~~~~~ 322 (337)
T 1pby_B 311 LEKKGQVDLPGN 322 (337)
T ss_dssp CCEEEEEECGGG
T ss_pred CcEEEEEEcCCC
Confidence 788888876644
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=4.8e-20 Score=179.17 Aligned_cols=245 Identities=11% Similarity=0.067 Sum_probs=156.3
Q ss_pred ceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccccee
Q 015363 37 IISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN 116 (408)
Q Consensus 37 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~ 116 (408)
.+.+++|+|||+++++ +.||+|++||..+++. ...+.+|... ...|.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~-----------------------~~~~~~~~~~---------~~~v~ 64 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS-----------------------TVLIEGKKIE---------SLRAI 64 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC-----------------------EEEECTTTTT---------TTTCS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcE-----------------------EEEecccccc---------ccccc
Confidence 3678999999998776 6899999999987753 2234444310 01489
Q ss_pred EEEEeecCCCcEEEEEeCC---------CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 117 KIRWCQSANSALYLLSTND---------KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 117 ~v~~~p~~~~~~l~~~~~d---------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
+++|+|+ |++|++++.+ +.+.+||+.+++.........+ ...+. .+.|+|||+.+
T Consensus 65 ~~~~SpD--g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~------~~~~~-------~~~~SPdG~~l- 128 (723)
T 1xfd_A 65 RYEISPD--REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS------NAKLQ-------YAGWGPKGQQL- 128 (723)
T ss_dssp EEEECTT--SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC------SCCCS-------BCCBCSSTTCE-
T ss_pred eEEECCC--CCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccc------ccccc-------ccEECCCCCEE-
Confidence 9999755 8899998764 7889999998876333222111 01122 57899999987
Q ss_pred cccccccCccccCCCCCceeeeceeeeccccccccccceeecccccc------------------ceEEEEeCCCCCEEE
Q 015363 188 RNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDY------------------HINSISNNSDGETFI 249 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~~i~~~~~~~~l~ 249 (408)
+.++. +.|++|+ +...+. .+.. ..+.. .+.+++|+|||+.|+
T Consensus 129 -----------a~~~~-~~i~~~~-~~~g~~------~~~~-~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la 188 (723)
T 1xfd_A 129 -----------IFIFE-NNIYYCA-HVGKQA------IRVV-STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA 188 (723)
T ss_dssp -----------EEEET-TEEEEES-SSSSCC------EEEE-CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE
T ss_pred -----------EEEEC-CeEEEEE-CCCCce------EEEe-cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEE
Confidence 44443 6899988 433221 1111 22111 237899999999998
Q ss_pred Ee-cCC----------------------------------eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCC
Q 015363 250 SA-DDL----------------------------------RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTH 294 (408)
Q Consensus 250 ~~-~d~----------------------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 294 (408)
++ .++ .|++||+.+......+ .. +.....+...+..++|+|||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l-~~-~~~~~~~~~~~~~~~~SpDg 266 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM-MP-PDDPRMREYYITMVKWATST 266 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC-CC-CCCGGGSSEEEEEEEESSSS
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe-eC-CccCCCccceeEEEEEeCCC
Confidence 87 332 7889998844322221 00 00112235678999999999
Q ss_pred CceEEEEeC----CCeEEEEEcCCCceecccccccccccCCCCcccccccccee----EEEEEccCCCEEEEe---CCC-
Q 015363 295 CNMLAYSSS----KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI----SDIKFARNGRHILSR---DYM- 362 (408)
Q Consensus 295 ~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i----~~~~~spdg~~l~s~---~d~- 362 (408)
+++++... +..|++||+.+++.. ..+..+. ...+ ..++|+|||+.|+.. .++
T Consensus 267 -~~l~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~~~-----------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 267 -KVAVTWLNRAQNVSILTLCDATTGVCT----KKHEDES-----------EAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (723)
T ss_dssp -EEEEEEEETTSCEEEEEEEETTTCCEE----EEEEEEC-----------SSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred -eEEEEEEcCCCCeEEEEEEeCCCCcce----EEEEecc-----------CCEEeccCCCceEcCCCCeEEEEEecccCC
Confidence 78876653 358999999988643 2222221 1222 368999999977743 246
Q ss_pred -----eEEEEE
Q 015363 363 -----TLKLWD 368 (408)
Q Consensus 363 -----~v~~wd 368 (408)
.|.+||
T Consensus 331 ~~~~~~l~~~d 341 (723)
T 1xfd_A 331 RGKFYHITVSS 341 (723)
T ss_dssp SSCEEEEEEEC
T ss_pred CcceeEEEEEe
Confidence 566777
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=2e-19 Score=170.31 Aligned_cols=260 Identities=10% Similarity=0.003 Sum_probs=172.9
Q ss_pred eccceEEEEECCCCCeEEEeec-CCeEEEEEeCCCCCCCCccccccc---ccccccCCCccceeeeecc---CCc-cccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDR-GGRVVLFERTDTRDNGGQRRDLEM---MDYSMSRHPEFRYKTEFQS---HEP-EFDY 105 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~-dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~---h~~-~~~~ 105 (408)
+..+|++++|+|||++||+++. ||+++||+++++.. .+.... ....+.++|+ +.+..-.. ... .+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~----~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET----VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE----EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc----EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 4568999999999999999887 99999999866542 111111 1225677787 44332221 110 0000
Q ss_pred cc--------ccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceee
Q 015363 106 LK--------SLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPK 177 (408)
Q Consensus 106 ~~--------~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (408)
+. .+.....+...+|+|+.++..+++++.++ +.+||+.+++...+..... ..+
T Consensus 95 ~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~~------------------~~~ 155 (582)
T 3o4h_A 95 VNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLPG------------------FGF 155 (582)
T ss_dssp EETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEESS------------------CEE
T ss_pred EeccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCCC------------------ceE
Confidence 00 11112235567898886554555555554 4599999988766654332 168
Q ss_pred EEccCCCeeecccccccCccccCCCCC----ceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-c
Q 015363 178 SYMANGGCGERNFGCASNDSSFPPGGV----SSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-D 252 (408)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~ 252 (408)
.|+|||+.+ +.++.+ ..|++|| +...+ .+. +..|...+..++|+|||+.|+++ .
T Consensus 156 ~~spDG~~l------------a~~~~~~~~~~~i~~~d-~~~g~-------~~~-l~~~~~~~~~~~~SpDG~~l~~~~~ 214 (582)
T 3o4h_A 156 VSDIRGDLI------------AGLGFFGGGRVSLFTSN-LSSGG-------LRV-FDSGEGSFSSASISPGMKVTAGLET 214 (582)
T ss_dssp EEEEETTEE------------EEEEEEETTEEEEEEEE-TTTCC-------CEE-ECCSSCEEEEEEECTTSCEEEEEEC
T ss_pred EECCCCCEE------------EEEEEcCCCCeEEEEEc-CCCCC-------ceE-eecCCCccccceECCCCCEEEEccC
Confidence 999999998 544444 6788888 43321 122 35677888999999999999977 7
Q ss_pred CC--eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEE--------EcCCCCceEEEEeCCCeEEEEEcCCCceecccc
Q 015363 253 DL--RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAE--------FHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHS 322 (408)
Q Consensus 253 d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 322 (408)
++ .|++||+.++. .. . +..|...+..++ |+|+| .++++++.|+++++|++ ++..
T Consensus 215 ~~~~~i~~~d~~~~~-~~-~-------~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~~---- 278 (582)
T 3o4h_A 215 AREARLVTVDPRDGS-VE-D-------LELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GERV---- 278 (582)
T ss_dssp SSCEEEEEECTTTCC-EE-E-------CCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEEE----
T ss_pred CCeeEEEEEcCCCCc-EE-E-------ccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCee----
Confidence 77 89999998543 33 3 345555555566 99999 99999999999999999 5432
Q ss_pred cccccccCCCCccccccccceeEEEEEccCCCEEEEe-CC---CeEEEEECC
Q 015363 323 KLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-DY---MTLKLWDIN 370 (408)
Q Consensus 323 ~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~d---~~v~~wd~~ 370 (408)
. .. .+.|.+++|+ ++++++++ ++ ..+.+||..
T Consensus 279 ~---~~------------~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 279 E---AP------------QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp C---CC------------SSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred c---cC------------CCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 1 11 1468899999 99998876 34 456666654
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=3.3e-19 Score=172.78 Aligned_cols=265 Identities=11% Similarity=0.053 Sum_probs=162.0
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
..|.+++|||| ..++.+ .++.|++||+.+++. ..+..+. ..+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~------------------------~~l~~~~------------~~~ 123 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKV------------------------TYLFDTN------------EET 123 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEE------------------------EEEECCT------------TCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCce------------------------EEccCCc------------ccc
Confidence 56999999999 655555 459999999877642 2233344 558
Q ss_pred eEEEEeecCCCcEEEEEeCCCeEEEEEcCC-----CcEEEEeccCCCCcccCCCCC-eEee-cCCceeeEEccCCCeeec
Q 015363 116 NKIRWCQSANSALYLLSTNDKTIKLWKVQE-----KKVKKVFDWNVHPEKAAGNGP-IFGS-HVSAIPKSYMANGGCGER 188 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~-v~~~-~~~~~~~~~~~~~~~l~~ 188 (408)
.+++|+|+ |++|+++ .|+.|++|++.+ ++............ . .+. +... ......++|+|||+.+..
T Consensus 124 ~~~~~Spd--G~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~-~--~g~~~~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 124 ASLDFSPV--GDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETL-V--YGQAVHQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp TTCEECTT--SSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTE-E--ESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred cCCcCCCC--CCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCe-E--cccchhhhhcCCCceEEECCCCCEEEE
Confidence 88999755 8888884 789999999998 76655433322100 0 000 0000 001126899999998843
Q ss_pred ccccccC-------------------ccccC--CCCCceeeeceeeeccccccccccceee-ccccccceEEEEeCCCCC
Q 015363 189 NFGCASN-------------------DSSFP--PGGVSSLRLPVVVTSQETNLVAGCRRIY-AHAHDYHINSISNNSDGE 246 (408)
Q Consensus 189 ~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~ 246 (408)
....... .+-.. ...+..|.+|| +...+. .... ...|...+.+++|+|||+
T Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d-~~~~~~------~~~~~~~~~~~~~~~~~~spdg~ 270 (706)
T 2z3z_A 198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH-LATGKT------VYLQTGEPKEKFLTNLSWSPDEN 270 (706)
T ss_dssp EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE-TTTTEE------EECCCCSCTTCEEEEEEECTTSS
T ss_pred EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE-CCCCce------EeeccCCCCceeEeeEEEECCCC
Confidence 3210000 00001 12446788888 433211 1111 124667799999999999
Q ss_pred EEEEe-cCC-----eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcC--CCCceEEEEeCCCeEEEEEcC-CCce
Q 015363 247 TFISA-DDL-----RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHP--THCNMLAYSSSKGSIRLIDMR-QSAL 317 (408)
Q Consensus 247 ~l~~~-~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~i~iwd~~-~~~~ 317 (408)
.|+++ .++ .|.+||+.++.....+.... .......+..++|+| +| +++++++.|+.++||++. .+..
T Consensus 271 ~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~---~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~~~~ 346 (706)
T 2z3z_A 271 ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVET---DKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTTGRL 346 (706)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEE---CSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEETTSCE
T ss_pred EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEcc---CCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEECCCCE
Confidence 88886 554 89999998542333322100 011111245789999 99 899999899999999876 3332
Q ss_pred ecccccccccccCCCCccccccccceeEE-EEEccCCCEEEEe-CC-C----eEEEEECCC
Q 015363 318 CDTHSKLFEEQEAPGTRSFFTEIIASISD-IKFARNGRHILSR-DY-M----TLKLWDINM 371 (408)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~spdg~~l~s~-~d-~----~v~~wd~~~ 371 (408)
. ..+..+ ...+.. ++|+|||+.|+.+ ++ + .|..||+.+
T Consensus 347 ~----~~l~~~------------~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 347 I----RQVTKG------------EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp E----EECCCS------------SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred E----EecCCC------------CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 2 333333 245666 7999999987654 43 4 666667665
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=2.2e-18 Score=151.71 Aligned_cols=213 Identities=10% Similarity=0.097 Sum_probs=134.5
Q ss_pred cceeEEEEeecCCCcEEEEEeCC-CeEEEEEcC--CCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 113 EKINKIRWCQSANSALYLLSTND-KTIKLWKVQ--EKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d-~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..+.+++|+|+ |+++++++.+ +.|.+|++. +++.......... ..+..++|+|+|+.+
T Consensus 38 ~~~~~~~~spd--g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l--- 98 (343)
T 1ri6_A 38 GQVQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP--------------GSLTHISTDHQGQFV--- 98 (343)
T ss_dssp SCCCCEEECTT--SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS--------------SCCSEEEECTTSSEE---
T ss_pred CCCceEEECCC--CCEEEEeecCCCeEEEEEecCCCCceeeccccccC--------------CCCcEEEEcCCCCEE---
Confidence 55889999654 8888888876 999999998 5554433222111 011268999999976
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCce
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQS 267 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~ 267 (408)
++++..++.|.+|+ +.... .......+ . ....+.+++|+|+++.++++ .++.|.+||+...+..
T Consensus 99 --------~~~~~~~~~i~~~d-~~~~~---~~~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 99 --------FVGSYNAGNVSVTR-LEDGL---PVGVVDVV-E-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp --------EEEETTTTEEEEEE-EETTE---EEEEEEEE-C-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred --------EEEecCCCeEEEEE-CCCCc---cccccccc-c-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 23445588999999 53111 11122222 2 22458889999999877765 7999999999853433
Q ss_pred eeEe--ecCCCcccCCcCCeEEEEEcCCCCceE-EEEeCCCeEEEEEcCC--CceecccccccccccCCCCccccccccc
Q 015363 268 FNIV--DVKPANMEDLTEVITSAEFHPTHCNML-AYSSSKGSIRLIDMRQ--SALCDTHSKLFEEQEAPGTRSFFTEIIA 342 (408)
Q Consensus 268 ~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~l-~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 342 (408)
.... .. .......+..++|+|++ +++ +++..++.|.+|++.. +... .......... .+ ....
T Consensus 165 ~~~~~~~~----~~~~~~~~~~~~~~pdg-~~l~~~~~~~~~i~~~~~~~~~g~~~--~~~~~~~~~~-----~~-~~~~ 231 (343)
T 1ri6_A 165 VAQDPAEV----TTVEGAGPRHMVFHPNE-QYAYCVNELNSSVDVWELKDPHGNIE--CVQTLDMMPE-----NF-SDTR 231 (343)
T ss_dssp EEEEEEEE----ECSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEESSCTTSCCE--EEEEEECSCT-----TC-CSCC
T ss_pred eeeccccc----ccCCCCCcceEEECCCC-CEEEEEeCCCCEEEEEEecCCCCcEE--EEeeccccCc-----cc-cccC
Confidence 2211 11 11123467899999999 655 5555789999999964 3221 0011110000 00 0023
Q ss_pred eeEEEEEccCCCEEEE-eC-CCeEEEEECCC
Q 015363 343 SISDIKFARNGRHILS-RD-YMTLKLWDINM 371 (408)
Q Consensus 343 ~i~~~~~spdg~~l~s-~~-d~~v~~wd~~~ 371 (408)
.+..++|+|+|++|++ +. ++.|.+||++.
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 5778999999998875 43 69999999983
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=6.2e-19 Score=155.72 Aligned_cols=256 Identities=11% Similarity=0.063 Sum_probs=166.0
Q ss_pred EEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEE
Q 015363 40 AIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIR 119 (408)
Q Consensus 40 ~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~ 119 (408)
.+++++++.++++++.++.|.+||..+++. ...+..+.. ..+..++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~-----------------------~~~~~~~~~-----------~~~~~~~ 49 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV-----------------------YKSCVMPDK-----------FGPGTAM 49 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEE-----------------------EEEEECSSC-----------CSSCEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcE-----------------------EEEEecCCC-----------CCCceeE
Confidence 456788899999999999999999887642 222322210 1477899
Q ss_pred EeecCCCcEEE-EEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccc
Q 015363 120 WCQSANSALYL-LSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSS 198 (408)
Q Consensus 120 ~~p~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (408)
|+|+ |++++ ++..++.|.+||+.+++..........+. . ....+..+.++|+|+.+
T Consensus 50 ~s~d--g~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~-------~--~~~~~~~~~~spdg~~l------------ 106 (349)
T 1jmx_B 50 MAPD--NRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG-------E--VGRSMYSFAISPDGKEV------------ 106 (349)
T ss_dssp ECTT--SSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT-------E--EEECSSCEEECTTSSEE------------
T ss_pred ECCC--CCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc-------c--ccccccceEECCCCCEE------------
Confidence 9654 76554 55578999999999988776555422100 0 00112268999999987
Q ss_pred cCCCC------------CceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCc
Q 015363 199 FPPGG------------VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQ 266 (408)
Q Consensus 199 ~~~~~------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~ 266 (408)
+++.. ++.|.+|| +..... ....... .+...+.+++|+|+++ ++++ ++.|.+||..+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~d-~~~~~~---~~~~~~~--~~~~~~~~~~~s~dg~-l~~~-~~~i~~~d~~~~~- 177 (349)
T 1jmx_B 107 YATVNPTQRLNDHYVVKPPRLEVFS-TADGLE---AKPVRTF--PMPRQVYLMRAADDGS-LYVA-GPDIYKMDVKTGK- 177 (349)
T ss_dssp EEEEEEEEECSSCEEECCCEEEEEE-GGGGGG---BCCSEEE--ECCSSCCCEEECTTSC-EEEE-SSSEEEECTTTCC-
T ss_pred EEEcccccccccccccCCCeEEEEE-CCCccc---cceeeec--cCCCcccceeECCCCc-EEEc-cCcEEEEeCCCCc-
Confidence 55543 38999999 543211 1111221 2234588899999999 4444 2239999998443
Q ss_pred eeeEeecCCCcc-------------------------------------------------------------cCCcCCe
Q 015363 267 SFNIVDVKPANM-------------------------------------------------------------EDLTEVI 285 (408)
Q Consensus 267 ~~~~~~~~~~~~-------------------------------------------------------------~~~~~~v 285 (408)
....+....... ..+...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (349)
T 1jmx_B 178 YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY 257 (349)
T ss_dssp EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcc
Confidence 333322210000 0011245
Q ss_pred EEEEEcC-CCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCe
Q 015363 286 TSAEFHP-THCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMT 363 (408)
Q Consensus 286 ~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~ 363 (408)
..++|+| ++ ++++++ ++.|.+||+.+++.. ..+... ..+.+++|+|||++|++++ ++.
T Consensus 258 ~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~~----~~~~~~-------------~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 258 FTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKLI----KAANLD-------------HTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp EEEEECSSCT-TEEEEE--ESEEEEEETTTTEEE----EEEECS-------------SCCCEEEECSSSSCEEEESBSSE
T ss_pred eeeEecCCCC-CEEEEE--cCeEEEEECccCeEE----EEEcCC-------------CCccceEECCCCCEEEEecCCCe
Confidence 6778889 99 777777 889999999988654 333322 2467899999999888774 699
Q ss_pred EEEEECCCCCCceeeeeec
Q 015363 364 LKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 364 v~~wd~~~~~~~~~~~~~~ 382 (408)
|.+||+++ ++.+..++.+
T Consensus 318 v~v~d~~~-~~~~~~~~~~ 335 (349)
T 1jmx_B 318 LAVFNPDT-LEKVKNIKLP 335 (349)
T ss_dssp EEEEETTT-TEEEEEEECS
T ss_pred EEEEeccc-cceeeeeecC
Confidence 99999987 6778777654
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=4.7e-19 Score=172.18 Aligned_cols=270 Identities=10% Similarity=0.054 Sum_probs=159.8
Q ss_pred ceEEEEECCCCCeEEEeecC---------CeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccc
Q 015363 37 IISAIEFDKSGDHLATGDRG---------GRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLK 107 (408)
Q Consensus 37 ~V~~~~~s~~~~~l~sg~~d---------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~ 107 (408)
.|.+++|||||++||+++.+ +.|.+||+.+++.. .+....+|.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---------------------~l~~~~~~~------- 113 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ---------------------SLDPPEVSN------- 113 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE---------------------ECCCTTCCS-------
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE---------------------eccCCcccc-------
Confidence 49999999999999999764 78889999877521 111223333
Q ss_pred ccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeec----------CCceee
Q 015363 108 SLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSH----------VSAIPK 177 (408)
Q Consensus 108 ~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----------~~~~~~ 177 (408)
..+..++|+|+ |++|++++. +.|++||+.+++...+....... .+.... .....+
T Consensus 114 -----~~~~~~~~SPd--G~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~-------~~~~g~~~~v~~ee~~~~~~~~ 178 (723)
T 1xfd_A 114 -----AKLQYAGWGPK--GQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEG-------VIYNGLSDWLYEEEILKTHIAH 178 (723)
T ss_dssp -----CCCSBCCBCSS--TTCEEEEET-TEEEEESSSSSCCEEEECCCBTT-------TEEEEECCHHHHHTTSSSSEEE
T ss_pred -----ccccccEECCC--CCEEEEEEC-CeEEEEECCCCceEEEecCCCCC-------ceECcccceeEEEEeccCcceE
Confidence 45889999765 889988876 79999999998776655432211 000000 011268
Q ss_pred EEccCCCeeecccccccC--c----------------ccc--CC--CCCceeeeceeeeccccccccccceeeccccccc
Q 015363 178 SYMANGGCGERNFGCASN--D----------------SSF--PP--GGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYH 235 (408)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~--~----------------~~~--~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (408)
+|+|||+.|......... . +.+ .| ..+..|.+|| +.............. ...+...
T Consensus 179 ~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d-~~~~~~~~~l~~~~~-~~~~~~~ 256 (723)
T 1xfd_A 179 WWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG-LNGPTHDLEMMPPDD-PRMREYY 256 (723)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE-SSSSCCCEECCCCCC-GGGSSEE
T ss_pred EECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE-CCCCceeEEeeCCcc-CCCccce
Confidence 999999987543211100 0 000 01 1123788888 433221000000000 1123577
Q ss_pred eEEEEeCCCCCEEEEe-c----CCeEEEEeCCCCCceeeEeecCCCcccCCcCCe----EEEEEcCCCCceEEE--EeCC
Q 015363 236 INSISNNSDGETFISA-D----DLRINLWNLEISNQSFNIVDVKPANMEDLTEVI----TSAEFHPTHCNMLAY--SSSK 304 (408)
Q Consensus 236 v~~i~~~~~~~~l~~~-~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~p~~~~~l~s--~~~d 304 (408)
+..++|+|||+++++. . +..|++||+.++ +...+.. ..+...+ ..++|+|+| +.|+. +..+
T Consensus 257 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~------~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~ 328 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-VCTKKHE------DESEAWLHRQNEEPVFSKDG-RKFFFIRAIPQ 328 (723)
T ss_dssp EEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-CEEEEEE------EECSSCCCCCCCCCEECTTS-CSEEEEEEECC
T ss_pred eEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceEEEE------eccCCEEeccCCCceEcCCC-CeEEEEEeccc
Confidence 8999999999988765 2 357999999844 3333321 1122333 378999999 65554 4556
Q ss_pred C------eEEEEE-cCCCceecccccccccccCCCCccccccccceeE-EEEEccCCCEEEEe-C-C--CeEEEEECCCC
Q 015363 305 G------SIRLID-MRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS-DIKFARNGRHILSR-D-Y--MTLKLWDINMD 372 (408)
Q Consensus 305 g------~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~-~~~~spdg~~l~s~-~-d--~~v~~wd~~~~ 372 (408)
+ .|.+|| ...+... ....+.... ..+. .++|+|||+.|+.. . + +.++||+++..
T Consensus 329 ~~~~~~~~l~~~d~~~~~~~~--~~~~l~~~~------------~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 329 GGRGKFYHITVSSSQPNSSND--NIQSITSGD------------WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp SSSSCEEEEEEECSSCCSSSC--CCCBSCCSS------------SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred CCCcceeEEEEEeccCCCCcc--ceeEeecCC------------eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 7 566777 3333200 012232211 2344 36999999998754 3 3 78999998764
Q ss_pred C
Q 015363 373 S 373 (408)
Q Consensus 373 ~ 373 (408)
+
T Consensus 395 ~ 395 (723)
T 1xfd_A 395 G 395 (723)
T ss_dssp T
T ss_pred C
Confidence 3
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=1.1e-18 Score=158.20 Aligned_cols=230 Identities=10% Similarity=0.124 Sum_probs=144.5
Q ss_pred eeeccceEEEEECCCCCeEE----EeecCCeEEEEEeCCCCCCC-CcccccccccccccCCCccceeeeeccCCcccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLA----TGDRGGRVVLFERTDTRDNG-GQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYL 106 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~----sg~~dg~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~ 106 (408)
+.|...|++++|+|+|++|| +|+.|+.|+|||+.+..... ...+ .......+.+|.
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~h~------ 149 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKR-------------PFAYHKLLKDAG------ 149 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCC-------------CSEEEECCCSGG------
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcc-------------eeeeeeccCCCC------
Confidence 45667899999999999999 88999999999986541100 0000 011234456676
Q ss_pred cccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 107 KSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 107 ~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
..|.+++|+|. ++.+|++++.||+|++||++++.....
T Consensus 150 ------~~V~~v~~~p~-~~~~las~s~Dg~v~iwD~~~~~~~~~----------------------------------- 187 (434)
T 2oit_A 150 ------GMVIDMKWNPT-VPSMVAVCLADGSIAVLQVTETVKVCA----------------------------------- 187 (434)
T ss_dssp ------GSEEEEEECSS-CTTEEEEEETTSCEEEEEESSSEEEEE-----------------------------------
T ss_pred ------CceEEEEECCC-CCCEEEEEECCCeEEEEEcCCCcceee-----------------------------------
Confidence 77999999865 256999999999999999987632110
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
..+|...|++++|+|+|++|++| .|+.|++||.+ ..
T Consensus 188 ------------------------------------------~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 188 ------------------------------------------TLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp ------------------------------------------EECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred ------------------------------------------ccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 13455779999999999999999 99999999998 33
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEE-EeCCC------eEEEEEcCCCceecccccccccccCCCCccccc
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAY-SSSKG------SIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFT 338 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s-~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (408)
. ...+.........|...|.+++|++++ .++++ ...|| .+++|+++...... + ..+.....+ ...+.
T Consensus 225 ~-~~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~-~-~~~~~~~~~--~~~~~ 298 (434)
T 2oit_A 225 E-KKVIPCPPFYESDHPVRVLDVLWIGTY-VFAIVYAAADGTLETSPDVVMALLPKKEEKH-P-EIFVNFMEP--CYGSC 298 (434)
T ss_dssp E-EEEECCCTTCCTTSCEEEEEEEEEETT-EEEEEEEETTCCSSSCCEEEEEECCCTTTCC-C-CEEEECCCS--SCCCC
T ss_pred c-cccccCCcccCCCCceeEEEEEEecCc-eEEEEEccCCCccCCCCceEEEEeccCCCCC-C-cceEecccC--CCCCC
Confidence 2 222211110011344579999999988 66544 33443 38999998653110 0 111111100 00001
Q ss_pred cccceeEEEEEccCCCEEEEe-C-CCeEEEEECCC
Q 015363 339 EIIASISDIKFARNGRHILSR-D-YMTLKLWDINM 371 (408)
Q Consensus 339 ~h~~~i~~~~~spdg~~l~s~-~-d~~v~~wd~~~ 371 (408)
+...+-..+.+-++.++++++ + ...|.+.....
T Consensus 299 ~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 299 TERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp SSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred CCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 111122234444777777765 3 36677777554
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=8.6e-19 Score=169.85 Aligned_cols=256 Identities=10% Similarity=0.075 Sum_probs=162.3
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCC-----CCCCCCcccccccccccccCCCccceeeeeccCCccc-cc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTD-----TRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEF-DY 105 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~-~~ 105 (408)
..+...+.+++|||||++||++ .++.|++|++.+ ++.. .....+...+ ..
T Consensus 117 ~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~-----------------------~~~~~~~~~~~~g 172 (706)
T 2z3z_A 117 FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI-----------------------AVTIDGTETLVYG 172 (706)
T ss_dssp ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE-----------------------ESCSCCBTTEEES
T ss_pred cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE-----------------------EeccCCCCCeEcc
Confidence 3456778999999999999995 689999999987 5421 0011111000 00
Q ss_pred c-cccccccceeEEEEeecCCCcEEEEEe---------------------------------CCCeEEEEEcCCCcEEEE
Q 015363 106 L-KSLEIEEKINKIRWCQSANSALYLLST---------------------------------NDKTIKLWKVQEKKVKKV 151 (408)
Q Consensus 106 ~-~~~~~~~~v~~v~~~p~~~~~~l~~~~---------------------------------~d~~i~vwd~~~~~~~~~ 151 (408)
. ...+....+.++.|+|+ |++|++++ .+..|.+||+.+++....
T Consensus 173 ~~~~~ee~~~~~~~~~SpD--g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~ 250 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPK--GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL 250 (706)
T ss_dssp SCCGGGCTTCCCSEEECTT--SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC
T ss_pred cchhhhhcCCCceEEECCC--CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee
Confidence 0 00000134689999755 88999987 457899999998876554
Q ss_pred eccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCC-----ceeeeceeeeccccccccccce
Q 015363 152 FDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGV-----SSLRLPVVVTSQETNLVAGCRR 226 (408)
Q Consensus 152 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~ 226 (408)
.....+ ...+. .+.|+|||+.+ ++++.+ ..|.+|| +...+ ..+
T Consensus 251 ~~~~~~------~~~~~-------~~~~spdg~~l------------~~~~~~~~~~~~~v~~~d-~~~g~------~~~ 298 (706)
T 2z3z_A 251 QTGEPK------EKFLT-------NLSWSPDENIL------------YVAEVNRAQNECKVNAYD-AETGR------FVR 298 (706)
T ss_dssp CCCSCT------TCEEE-------EEEECTTSSEE------------EEEEECTTSCEEEEEEEE-TTTCC------EEE
T ss_pred ccCCCC------ceeEe-------eEEEECCCCEE------------EEEEeCCCCCeeEEEEEE-CCCCc------eee
Confidence 322111 11233 68999999987 443333 4888888 43321 111
Q ss_pred eec-ccccc---ceEEEEeCC--CCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEE-EEEcCCCCceE
Q 015363 227 IYA-HAHDY---HINSISNNS--DGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITS-AEFHPTHCNML 298 (408)
Q Consensus 227 ~~~-~~~~~---~v~~i~~~~--~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l 298 (408)
.+. ..+.. .+..++|+| +|++++++ .++.+++|+++........ +..+...+.. ++|+|++ +.|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~-------l~~~~~~v~~~~~~spdg-~~l 370 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQ-------VTKGEWEVTNFAGFDPKG-TRL 370 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEE-------CCCSSSCEEEEEEECTTS-SEE
T ss_pred EEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEe-------cCCCCeEEEeeeEEcCCC-CEE
Confidence 111 11111 245789999 99988888 7899999988633333332 4556666776 7999999 555
Q ss_pred E-EEeCCC----eEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe-C-C---CeEEEEE
Q 015363 299 A-YSSSKG----SIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-D-Y---MTLKLWD 368 (408)
Q Consensus 299 ~-s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~-d---~~v~~wd 368 (408)
+ ++..++ .|..||+.++.. ..+. + ...+.+++|+|||++|+.. + + +.|++||
T Consensus 371 ~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~-~------------~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 371 YFESTEASPLERHFYCIDIKGGKT-----KDLT-P------------ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp EEEESSSCTTCBEEEEEETTCCCC-----EESC-C------------SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred EEEecCCCCceEEEEEEEcCCCCc-----eecc-C------------CCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 4 444454 677777776542 2222 2 2468899999999988865 2 2 5799999
Q ss_pred CCC
Q 015363 369 INM 371 (408)
Q Consensus 369 ~~~ 371 (408)
+.+
T Consensus 433 ~~~ 435 (706)
T 2z3z_A 433 IGK 435 (706)
T ss_dssp SSS
T ss_pred CCC
Confidence 986
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=3.3e-18 Score=172.40 Aligned_cols=270 Identities=9% Similarity=0.030 Sum_probs=182.9
Q ss_pred eeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 32 VQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 32 ~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..|...+.++.|+++ .++++++.++.++||.+..... ....+..|.
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~----------------------~~~~l~~~~----------- 245 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGK----------------------DLRKHTSFT----------- 245 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSC----------------------SCEECCCCC-----------
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCC----------------------cceEecCCC-----------
Confidence 468899999999988 6777888899999998764221 112233332
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEc-cCCCeeeccc
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYM-ANGGCGERNF 190 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~l~~~~ 190 (408)
.+..++|+|+ |++++++ .++.|.+|++...... .+....... .............+.|+ |+|+.+
T Consensus 246 --~~~~~~~SpD--G~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~----~~~~~~~~~~v~~~~~S~pdG~~l---- 311 (1045)
T 1k32_A 246 --DYYPRHLNTD--GRRILFS-KGGSIYIFNPDTEKIE-KIEIGDLES----PEDRIISIPSKFAEDFSPLDGDLI---- 311 (1045)
T ss_dssp --SSCEEEEEES--SSCEEEE-ETTEEEEECTTTCCEE-ECCCCCCCB----CCSEEEECGGGGEEEEEECGGGCE----
T ss_pred --CcceeeEcCC--CCEEEEE-eCCEEEEecCCceEee-eeccCcccc----cccccccccccceeeecCCCCCEE----
Confidence 2566799866 7788877 5899999999555443 222211000 00001111122378999 999987
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeecccccc-ceEEEEeCCCCCEEEEe-cCCeEE-EEeCCCCCce
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDY-HINSISNNSDGETFISA-DDLRIN-LWNLEISNQS 267 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~i~~~~~~~~l~~~-~d~~i~-iwd~~~~~~~ 267 (408)
+.++ ++.+.+|+ +.... ... +..|.. .+..++|+ +|+.|+.+ .+..+. +||+.. +..
T Consensus 312 --------a~~~-~~~i~~~~-~~~~~-------~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~-~~~ 371 (1045)
T 1k32_A 312 --------AFVS-RGQAFIQD-VSGTY-------VLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT-GKA 371 (1045)
T ss_dssp --------EEEE-TTEEEEEC-TTSSB-------EEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT-CCE
T ss_pred --------EEEE-cCEEEEEc-CCCCc-------eEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC-CCc
Confidence 4444 77888888 43211 111 245555 79999999 99999988 777888 889883 333
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDI 347 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 347 (408)
.. +..|...+..++|+|+| ++|++++.++.|++||+.+++.. ..+.+| ...+.++
T Consensus 372 ~~--------l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~~----~~~~~~------------~~~v~~~ 426 (1045)
T 1k32_A 372 EK--------FEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPT----VIERSR------------EAMITDF 426 (1045)
T ss_dssp EE--------CCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE----EEEECS------------SSCCCCE
T ss_pred eE--------ecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCceE----EeccCC------------CCCccce
Confidence 22 33677889999999999 99999999999999999988653 333344 3678899
Q ss_pred EEccCCCEEEEeC-C----------CeEEEEECCCCCCceeeeeecccccceEEecCCCe
Q 015363 348 KFARNGRHILSRD-Y----------MTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNY 396 (408)
Q Consensus 348 ~~spdg~~l~s~~-d----------~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (408)
+|||||++|++++ + +.|++||+.+ ++ +..+..|......+...-++.
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~-g~-~~~l~~~~~~~~~~~~spdG~ 484 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG-RK-IFAATTENSHDYAPAFDADSK 484 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT-TE-EEECSCSSSBEEEEEECTTSC
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCC-Cc-EEEeeCCCcccCCceEcCCCC
Confidence 9999999998763 2 4899999986 44 666666655444443333444
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=2.4e-17 Score=145.82 Aligned_cols=238 Identities=8% Similarity=0.048 Sum_probs=157.8
Q ss_pred eeccceEEEEECCCCCeEE-EeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLA-TGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~-sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
.....+..++|+|+|++++ ++..++.|.+||..+++. ...+..+.... .....
T Consensus 86 ~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-----------------------~~~~~~~~~~~---~~~~~ 139 (353)
T 3vgz_A 86 HNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV-----------------------KGRLVLDDRKR---TEEVR 139 (353)
T ss_dssp EESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE-----------------------EEEEESCCCCC---CSSCC
T ss_pred ecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee-----------------------EEEEecCCCcc---ccccC
Confidence 3445678899999999554 455579999999887653 12222221000 00000
Q ss_pred ccceeEEEEeecCCCcEEEEEe--CCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 112 EEKINKIRWCQSANSALYLLST--NDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
...+.+++|+|+ |+++++++ .++.|.+||+.+++....+...... +..+.++|+|+.+
T Consensus 140 ~~~~~~~~~s~d--g~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---------------~~~~~~s~dg~~l--- 199 (353)
T 3vgz_A 140 PLQPRELVADDA--TNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM---------------STGLALDSEGKRL--- 199 (353)
T ss_dssp CCEEEEEEEETT--TTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT---------------CCCCEEETTTTEE---
T ss_pred CCCCceEEECCC--CCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc---------------cceEEECCCCCEE---
Confidence 012688999755 77776665 5889999999999887766522110 1158899999987
Q ss_pred cccccCccccCCCCCceeeeceeeeccccccccccceeec---cccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCC
Q 015363 190 FGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYA---HAHDYHINSISNNSDGETFISA--DDLRINLWNLEIS 264 (408)
Q Consensus 190 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~ 264 (408)
+++..++.|.+|| ....+ ....+. .++...+..++|+|+++.++++ .++.|.+||..+.
T Consensus 200 ---------~~~~~~~~i~~~d-~~~~~------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 200 ---------YTTNADGELITID-TADNK------ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp ---------EEECTTSEEEEEE-TTTTE------EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred ---------EEEcCCCeEEEEE-CCCCe------EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 7777789999999 43321 111111 1245568889999999977765 5799999999844
Q ss_pred CceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccccccee
Q 015363 265 NQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI 344 (408)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 344 (408)
+....+.. .. ...++|+|++..++++...++.|.+||+.+++.. ..+... ..+
T Consensus 264 -~~~~~~~~-------~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~----~~~~~~-------------~~~ 316 (353)
T 3vgz_A 264 -NILAKVAA-------PE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV----KTFDTP-------------THP 316 (353)
T ss_dssp -CEEEEEEC-------SS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE----EEEECC-------------SEE
T ss_pred -cEEEEEEc-------CC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE----EEEecC-------------CCC
Confidence 44443321 11 2469999999335555557999999999988654 333333 467
Q ss_pred EEEEEccCCCEEEEe
Q 015363 345 SDIKFARNGRHILSR 359 (408)
Q Consensus 345 ~~~~~spdg~~l~s~ 359 (408)
.+++|+|||++|+.+
T Consensus 317 ~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 317 NSLALSADGKTLYVS 331 (353)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred CeEEEcCCCCEEEEE
Confidence 899999999977665
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=8.6e-19 Score=170.20 Aligned_cols=257 Identities=8% Similarity=0.025 Sum_probs=157.9
Q ss_pred EEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEE
Q 015363 40 AIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIR 119 (408)
Q Consensus 40 ~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~ 119 (408)
+++|+|+|++++++ .|+.|++||+.+++. ...+.+|... ...|.+++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~-----------------------~~~~~~~~~~---------~~~~~~~~ 66 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQS-----------------------YTILSNRTMK---------SVNASNYG 66 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCE-----------------------EEEECHHHHH---------TTTCSEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcE-----------------------EEEEcccccc---------ccceeeEE
Confidence 77999999766655 699999999987753 1222332200 01388999
Q ss_pred EeecCCCcEEEEEeC---------CCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 120 WCQSANSALYLLSTN---------DKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 120 ~~p~~~~~~l~~~~~---------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
|+|+ |++|++++. ++.|++||+.+++........ ..+. .+.|+|||+.+
T Consensus 67 ~SpD--g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---------~~~~-------~~~~SPDG~~l---- 124 (719)
T 1z68_A 67 LSPD--RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---------RPIQ-------YLCWSPVGSKL---- 124 (719)
T ss_dssp ECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---------SSBC-------CEEECSSTTCE----
T ss_pred ECCC--CCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---------cccc-------cceECCCCCEE----
Confidence 9754 889998876 789999999998762111111 1122 58999999987
Q ss_pred ccccCccccCCCCCceeeeceeeecccccccc---ccceeeccccccc---------eEEEEeCCCCCEEEEe-cC-C--
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVA---GCRRIYAHAHDYH---------INSISNNSDGETFISA-DD-L-- 254 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------v~~i~~~~~~~~l~~~-~d-~-- 254 (408)
+.+ .++.|++|+ +...+..... ..... ..++... ..+++|+|||+.|+.+ .| +
T Consensus 125 --------a~~-~~~~i~~~~-~~~g~~~~l~~~~~~~~v-~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~ 193 (719)
T 1z68_A 125 --------AYV-YQNNIYLKQ-RPGDPPFQITFNGRENKI-FNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDI 193 (719)
T ss_dssp --------EEE-ETTEEEEES-STTSCCEECCCCCBTTTE-EESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTS
T ss_pred --------EEE-ECCeEEEEe-CCCCCcEEEecCCCcCCe-EcccccceeeeecccCcccEEECCCCCEEEEEEECCCCC
Confidence 444 367999998 4332211100 00000 0122111 2489999999999987 33 2
Q ss_pred -------------------------------eEEEEeCCCCCce--eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEE
Q 015363 255 -------------------------------RINLWNLEISNQS--FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYS 301 (408)
Q Consensus 255 -------------------------------~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 301 (408)
.|++||+.+.... ..+. .+..+.+|...+..++|+||+ +++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~SpD~-~~~~~~ 270 (719)
T 1z68_A 194 PVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP--VPAMIASSDYYFSWLTWVTDE-RVCLQW 270 (719)
T ss_dssp CEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC--CCHHHHTSCEEEEEEEESSSS-EEEEEE
T ss_pred ceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc--CCccCCCCcceEEEeEEeCCC-eEEEEE
Confidence 7889998843321 1110 011234677889999999998 877775
Q ss_pred eCC----CeEEEEE----cCCCceeccccccc----ccccCCCCccccccccceeE-----EEEEccCCCEEEE--e-CC
Q 015363 302 SSK----GSIRLID----MRQSALCDTHSKLF----EEQEAPGTRSFFTEIIASIS-----DIKFARNGRHILS--R-DY 361 (408)
Q Consensus 302 ~~d----g~i~iwd----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~h~~~i~-----~~~~spdg~~l~s--~-~d 361 (408)
... ..|.+|| +.+++.. ..+ .++ ...+. .+.|+|||+.|+. + .+
T Consensus 271 ~~~~~~~~~l~~~d~~~~~~~g~~~----~~~~~~~~~~------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 271 LKRVQNVSVLSICDFREDWQTWDCP----KTQEHIEESR------------TGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EESSTTEEEEEEEEECSSSSSEECC----GGGEEEEECS------------SSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred eccccCeEEEEEEcccCCCCCCceE----EEEecccccC------------CceEccccCCccEECCCCCeEEEEEEccC
Confidence 432 2488899 7766432 233 223 23444 7899999996553 3 23
Q ss_pred --CeEEEEECCCCCCceeeeeecc
Q 015363 362 --MTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 362 --~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
..|.+||+.. ++ .+.+..+.
T Consensus 335 g~~~l~~~~~~~-~~-~~~lt~~~ 356 (719)
T 1z68_A 335 GYKHIHYIKDTV-EN-AIQITSGK 356 (719)
T ss_dssp SCEEEEEESSCS-TT-CEECSCSS
T ss_pred CceEEEEEECCC-Cc-eEecccCc
Confidence 4677778765 33 44554443
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=3.7e-18 Score=172.09 Aligned_cols=242 Identities=11% Similarity=0.036 Sum_probs=166.1
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
..+.+++|+|||++|+++ .++.|.+|+...... ..+.++... .......+...+
T Consensus 245 ~~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l------------------------~~l~~~~~~-~~~~~~~~~~~v 298 (1045)
T 1k32_A 245 TDYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKI------------------------EKIEIGDLE-SPEDRIISIPSK 298 (1045)
T ss_dssp CSSCEEEEEESSSCEEEE-ETTEEEEECTTTCCE------------------------EECCCCCCC-BCCSEEEECGGG
T ss_pred CCcceeeEcCCCCEEEEE-eCCEEEEecCCceEe------------------------eeeccCccc-cccccccccccc
Confidence 356788999999999988 588999999843221 111111000 000000112568
Q ss_pred eEEEEe-ecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCC-CeEeecCCceeeEEccCCCeeecccccc
Q 015363 116 NKIRWC-QSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNG-PIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 116 ~~v~~~-p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
.+++|+ |+ |+++++++ ++.|.+|++.+++..... .+ .+ .+. .+.|+ +|+.+
T Consensus 299 ~~~~~S~pd--G~~la~~~-~~~i~~~~~~~~~~~~~~-~~--------~~~~~~-------~~~~s-dg~~l------- 351 (1045)
T 1k32_A 299 FAEDFSPLD--GDLIAFVS-RGQAFIQDVSGTYVLKVP-EP--------LRIRYV-------RRGGD-TKVAF------- 351 (1045)
T ss_dssp GEEEEEECG--GGCEEEEE-TTEEEEECTTSSBEEECS-CC--------SCEEEE-------EECSS-SEEEE-------
T ss_pred ceeeecCCC--CCEEEEEE-cCEEEEEcCCCCceEEcc-CC--------CcceEE-------eeeEc-CCCeE-------
Confidence 999997 66 88888887 889999999887754421 11 11 222 57888 88876
Q ss_pred cCccccCCCCCceee-eceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEe
Q 015363 194 SNDSSFPPGGVSSLR-LPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 194 ~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~ 271 (408)
+.++.+..+. +|+ +... ....+ ..|...+..++|+|+|+.|+++ .++.|++||+.+ +....+
T Consensus 352 -----~~~s~~~~l~~~~d-~~~~-------~~~~l-~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g~~~~~- 415 (1045)
T 1k32_A 352 -----IHGTREGDFLGIYD-YRTG-------KAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKPTVI- 415 (1045)
T ss_dssp -----EEEETTEEEEEEEE-TTTC-------CEEEC-CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEE-
T ss_pred -----EEEECCCceEEEEE-CCCC-------CceEe-cCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-CceEEe-
Confidence 5555566666 767 3221 11222 3667789999999999999998 899999999984 444333
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCC----------eEEEEEcCCCceecccccccccccCCCCcccccccc
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG----------SIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEII 341 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 341 (408)
...|...+.+++|+|+| ++|++++.++ .|++||+.+++. ..+..+ .
T Consensus 416 ------~~~~~~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~-----~~l~~~------------~ 471 (1045)
T 1k32_A 416 ------ERSREAMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI-----FAATTE------------N 471 (1045)
T ss_dssp ------EECSSSCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTEE-----EECSCS------------S
T ss_pred ------ccCCCCCccceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCcE-----EEeeCC------------C
Confidence 34577888999999999 8888777644 999999998752 334444 3
Q ss_pred ceeEEEEEccCCCEEEEeC-CCeEEEEECC
Q 015363 342 ASISDIKFARNGRHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 342 ~~i~~~~~spdg~~l~s~~-d~~v~~wd~~ 370 (408)
..+..++|+|||++|+.++ ++...+|+..
T Consensus 472 ~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 472 SHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp SBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred cccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 5678899999999999875 4777777754
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=1.4e-17 Score=148.06 Aligned_cols=257 Identities=11% Similarity=0.012 Sum_probs=156.9
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeC-CCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERT-DTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
..+..++|+|+|++|++++.+ .|.+|++. +++.. .......+ ..
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~---------------------~~~~~~~~-------------g~ 84 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIV---------------------HEASHPIG-------------GH 84 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEE---------------------EEEEEECC-------------SS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEE---------------------EeeEeecC-------------CC
Confidence 468899999999999999888 99999986 44310 00111111 12
Q ss_pred eeEEEEeecCCCcE--EEEEe-------------CCCeEEEEEcC-CCcEEEEeccCCCCcccCCCCCeEeecCCceeeE
Q 015363 115 INKIRWCQSANSAL--YLLST-------------NDKTIKLWKVQ-EKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKS 178 (408)
Q Consensus 115 v~~v~~~p~~~~~~--l~~~~-------------~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (408)
+.+++|+| +|++ ++++. .++++.+|++. .++........... ....+ ..++
T Consensus 85 ~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~----~~~~~-------~~~~ 151 (365)
T 1jof_A 85 PRANDADT--NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQ----ENTGI-------HGMV 151 (365)
T ss_dssp GGGGCTTS--CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECC----TTCCE-------EEEE
T ss_pred CccEEECC--CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeC----CCCcc-------eEEE
Confidence 45578854 4874 44443 68999999997 45544332210000 01112 2689
Q ss_pred EccCCCeeecccccccCccccCC-CCCceeeeceeee-ccccccccccceeec-cccccceEEEEeCCCCCEEEEe--cC
Q 015363 179 YMANGGCGERNFGCASNDSSFPP-GGVSSLRLPVVVT-SQETNLVAGCRRIYA-HAHDYHINSISNNSDGETFISA--DD 253 (408)
Q Consensus 179 ~~~~~~~l~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~~~--~d 253 (408)
|+|+|+.+ +++ ..++.|.+|+ +. ..+.. ....+. ..|...++.++|+|+|++++++ .+
T Consensus 152 ~spdG~~l------------~~~~~~~~~v~~~~-~~~~g~~~----~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~ 214 (365)
T 1jof_A 152 FDPTETYL------------YSADLTANKLWTHR-KLASGEVE----LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG 214 (365)
T ss_dssp ECTTSSEE------------EEEETTTTEEEEEE-ECTTSCEE----EEEEEECSSTTCCEEEEEECTTSSEEEEEETTT
T ss_pred ECCCCCEE------------EEEcCCCCEEEEEE-ECCCCCEE----EeeeEecCCCCCCCCEeEECCCCCEEEEEECCC
Confidence 99999977 443 3467899999 54 21111 111110 1235668999999999988776 57
Q ss_pred CeEEEEeCCC-CCcee---eEeecCCCcccCCcC------CeEEEE-EcCCCCceEEEEeCC-C-----eEEEEEcC-CC
Q 015363 254 LRINLWNLEI-SNQSF---NIVDVKPANMEDLTE------VITSAE-FHPTHCNMLAYSSSK-G-----SIRLIDMR-QS 315 (408)
Q Consensus 254 ~~i~iwd~~~-~~~~~---~~~~~~~~~~~~~~~------~v~~~~-~~p~~~~~l~s~~~d-g-----~i~iwd~~-~~ 315 (408)
+.|.+|+++. .+... ..+...+..+.+|.. .+..++ |+|+| ++|+++..+ . .|.+|++. ++
T Consensus 215 ~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~~~~~~~~i~v~~~~~~g 293 (365)
T 1jof_A 215 NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRANKFELQGYIAGFKLRDCG 293 (365)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CEEEEECCCCCCCCCCeEEEEEECCCC
Confidence 8999998763 22221 122211111223332 578999 99999 777665542 3 89999996 44
Q ss_pred ceecccccccccccCCCCccccccccceeEEEEEcc---CCCEEEEeC-C-CeEEEEECCC
Q 015363 316 ALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFAR---NGRHILSRD-Y-MTLKLWDINM 371 (408)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp---dg~~l~s~~-d-~~v~~wd~~~ 371 (408)
+.. ........+ ...+..++|+| ||++|++++ + +.|.+|+++.
T Consensus 294 ~~~-~~~~~~~~~------------~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 294 SIE-KQLFLSPTP------------TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp CEE-EEEEEEECS------------SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CEE-EeeeeeecC------------CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 321 000011111 12456789999 899999884 4 8999999975
No 156
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=6.9e-16 Score=132.24 Aligned_cols=263 Identities=14% Similarity=0.167 Sum_probs=174.6
Q ss_pred cCcccceeeecccCcCcccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccc
Q 015363 12 AQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFR 91 (408)
Q Consensus 12 ~~~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 91 (408)
.....|.+...|+.. +...++-..+.+++++++|+++++...++.|.+|+.+...
T Consensus 8 ~~~~~~~~~~~~g~~--g~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~----------------------- 62 (286)
T 1q7f_A 8 IKRQRMIYHCKFGEF--GVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRF----------------------- 62 (286)
T ss_dssp CCCEEECEEEEECCB--SSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCE-----------------------
T ss_pred cccceeEEEEeccCC--CCCCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcE-----------------------
Confidence 445567777777754 3344667789999999999988888889999999976321
Q ss_pred eeeeec------cCCcccccccccccccceeEEEEeecCCCcEEEEEeC-CCeEEEEEcCCCcEEEEeccCCCCcccCCC
Q 015363 92 YKTEFQ------SHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTN-DKTIKLWKVQEKKVKKVFDWNVHPEKAAGN 164 (408)
Q Consensus 92 ~~~~~~------~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 164 (408)
...+. ++. ..+.++++.+ +++.++++... ++.|.+|| .+++....+.... .
T Consensus 63 -~~~~~~~~~~~~~~------------~~p~~i~~~~-~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~-------~ 120 (286)
T 1q7f_A 63 -KFQFGECGKRDSQL------------LYPNRVAVVR-NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATI-------L 120 (286)
T ss_dssp -EEEECCBSSSTTCB------------SSEEEEEEET-TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTT-------C
T ss_pred -EEEecccCCCcccc------------cCceEEEEEc-CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCcc-------C
Confidence 11121 122 4478888842 34655555533 89999999 4555544432211 0
Q ss_pred CCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeec-cccccceEEEEeCC
Q 015363 165 GPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYA-HAHDYHINSISNNS 243 (408)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~ 243 (408)
..+ ..+++.++|+.+ ++...++.|.+|+ ... .....+. ..+...+..++++|
T Consensus 121 ~~~-------~~i~~~~~g~l~------------v~~~~~~~i~~~~-~~g-------~~~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 121 QHP-------RGVTVDNKGRII------------VVECKVMRVIIFD-QNG-------NVLHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp SCE-------EEEEECTTSCEE------------EEETTTTEEEEEC-TTS-------CEEEEEECTTTCSSEEEEEECS
T ss_pred CCc-------eEEEEeCCCCEE------------EEECCCCEEEEEc-CCC-------CEEEEeCCCCccCCcEEEEECC
Confidence 112 268888998865 6666778898888 321 1112211 13345688999999
Q ss_pred CCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCC-eEEEEEcCCCceeccc
Q 015363 244 DGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG-SIRLIDMRQSALCDTH 321 (408)
Q Consensus 244 ~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~ 321 (408)
+++++++. .++.|++||.. +. .+..+. ..++...+..++++|+| +++++...++ .|.+||.. ++.+
T Consensus 174 ~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~-----~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~-g~~~--- 241 (286)
T 1q7f_A 174 KQEIFISDNRAHCVKVFNYE-GQ-YLRQIG-----GEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQD-GQLI--- 241 (286)
T ss_dssp SSEEEEEEGGGTEEEEEETT-CC-EEEEES-----CTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTT-SCEE---
T ss_pred CCCEEEEECCCCEEEEEcCC-CC-EEEEEc-----cCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCC-CCEE---
Confidence 99988877 78999999986 33 332211 12233568899999999 8888887776 99999964 4332
Q ss_pred ccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCC
Q 015363 322 SKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINM 371 (408)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~ 371 (408)
..+..+.. ...+.+++++|+|+++++..++.|++|++..
T Consensus 242 -~~~~~~~~----------~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 242 -SALESKVK----------HAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp -EEEEESSC----------CSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred -EEEcccCC----------CCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 33333311 1347789999999988886679999999865
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=3.5e-16 Score=138.04 Aligned_cols=233 Identities=9% Similarity=0.099 Sum_probs=138.9
Q ss_pred cceeEEEEeecCCCcEEEEEeC---CCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 113 EKINKIRWCQSANSALYLLSTN---DKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
..+..++|+| +|+ +++++. ++.|.+|++.+++......... ....+..++++|+|+.+
T Consensus 40 ~~p~~~a~sp--dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-------------~~~~p~~~a~spdg~~l--- 100 (347)
T 3hfq_A 40 QNPTYLALSA--KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-------------PGTPPAYVAVDEARQLV--- 100 (347)
T ss_dssp SCCCCEEECT--TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEE-------------ESCCCSEEEEETTTTEE---
T ss_pred CCcceEEEcc--CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeec-------------CCCCCEEEEECCCCCEE---
Confidence 4478899965 477 555543 6899999998776443322110 01122268999999987
Q ss_pred cccccCccccCCC-CCceeeeceeeeccccccccccceeec-c-------ccccceEEEEeCCCCCEEEEe-cCCeEEEE
Q 015363 190 FGCASNDSSFPPG-GVSSLRLPVVVTSQETNLVAGCRRIYA-H-------AHDYHINSISNNSDGETFISA-DDLRINLW 259 (408)
Q Consensus 190 ~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~v~~i~~~~~~~~l~~~-~d~~i~iw 259 (408)
++++ .++.|.+|+ +...... .....+. . .+...+.+++|+|+++++++. .++.|.+|
T Consensus 101 ---------~~~~~~~~~v~v~~-~~~~g~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 101 ---------YSANYHKGTAEVMK-IAADGAL---TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp ---------EEEETTTTEEEEEE-ECTTSCE---EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ---------EEEeCCCCEEEEEE-eCCCCCe---eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 5544 789999999 5321110 0111110 1 122358899999999966666 78999999
Q ss_pred eCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCc-eEEEEeCCCeEEEEEcCC--CceecccccccccccCCCCccc
Q 015363 260 NLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN-MLAYSSSKGSIRLIDMRQ--SALCDTHSKLFEEQEAPGTRSF 336 (408)
Q Consensus 260 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~ 336 (408)
++...+.......+ .......+..++|+|+| + ++++...++.|.+|++.. ++.. .+..+..... .
T Consensus 168 ~~~~~g~~~~~~~~----~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~--~~~~~~~~~~-----~ 235 (347)
T 3hfq_A 168 NVSDAGQLSEQSVL----TMEAGFGPRHLVFSPDG-QYAFLAGELSSQIASLKYDTQTGAFT--QLGIVKTIPA-----D 235 (347)
T ss_dssp EECTTSCEEEEEEE----ECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEEETTTTEEE--EEEEEESSCT-----T
T ss_pred EECCCCcEEEeeeE----EcCCCCCCceEEECCCC-CEEEEEeCCCCEEEEEEecCCCCceE--EeeeeeecCC-----C
Confidence 99843333222111 01122356789999999 6 455566789999999885 3321 1111111100 0
Q ss_pred cccccceeEEEEEccCCCEEEEe-C-CCeEEEEECCCCC--CceeeeeecccccceEE
Q 015363 337 FTEIIASISDIKFARNGRHILSR-D-YMTLKLWDINMDS--GPVATFQVHEHLRPKVM 390 (408)
Q Consensus 337 ~~~h~~~i~~~~~spdg~~l~s~-~-d~~v~~wd~~~~~--~~~~~~~~~~~~~~~~~ 390 (408)
+. ....+..++|+|||++|+++ . ++.|.+|+++..+ +.+..+..+......+.
T Consensus 236 ~~-~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 236 YT-AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp CC-SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEE
T ss_pred CC-CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEE
Confidence 00 01458899999999988554 3 6999999997423 33444444433333343
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=8.7e-17 Score=156.27 Aligned_cols=259 Identities=10% Similarity=0.076 Sum_probs=156.0
Q ss_pred ceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccccee
Q 015363 37 IISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN 116 (408)
Q Consensus 37 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~ 116 (408)
...+++|+|||++|+++ ||.|++||+.+++. ...+.+|.... ......
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~-----------------------~~~~~~~~~~~-------~~~~~~ 65 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNS-----------------------SVFLENSTFDE-------FGHSIN 65 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCE-----------------------EEEECTTTTTT-------CCSCCC
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCce-----------------------EEEEechhhhh-------hccccc
Confidence 45689999999999886 89999999988763 23345554110 001234
Q ss_pred EEEEeecCCCcEEEEEeCC---------CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 117 KIRWCQSANSALYLLSTND---------KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 117 ~v~~~p~~~~~~l~~~~~d---------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
++.|+| ||++|++++.+ +.+.+||+.+++...+... .+.+. ...|+|||+.|
T Consensus 66 ~~~~Sp--dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~---------~~~~~-------~~~~SPdG~~l- 126 (740)
T 4a5s_A 66 DYSISP--DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERI---------PNNTQ-------WVTWSPVGHKL- 126 (740)
T ss_dssp EEEECT--TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---------CTTEE-------EEEECSSTTCE-
T ss_pred ceEECC--CCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccC---------CCcce-------eeEECCCCCEE-
Confidence 578865 48899998876 5667999999876542221 12233 68999999987
Q ss_pred cccccccCccccCCCCCceeeeceeeeccccccc---cccceeeccccc---------cceEEEEeCCCCCEEEEe--cC
Q 015363 188 RNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLV---AGCRRIYAHAHD---------YHINSISNNSDGETFISA--DD 253 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~---------~~v~~i~~~~~~~~l~~~--~d 253 (408)
+.+ .++.|.+|+ +...+.... +..... ..++. .....+.|+|||+.||.+ ++
T Consensus 127 -----------a~~-~~~~i~~~~-~~~~~~~~lt~~g~~~~~-~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~ 192 (740)
T 4a5s_A 127 -----------AYV-WNNDIYVKI-EPNLPSYRITWTGKEDII-YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND 192 (740)
T ss_dssp -----------EEE-ETTEEEEES-STTSCCEECCSCCBTTTE-EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred -----------EEE-ECCeEEEEE-CCCCceEEEcCCCCccce-ecCcccccccchhcCCCcceEECCCCCEEEEEEEcc
Confidence 333 467888888 433221111 000000 01111 112358999999999876 33
Q ss_pred C-----------------------------------eEEEEeCCC---CC--ceeeEeecCCCcccCCcCCeEEEEEcCC
Q 015363 254 L-----------------------------------RINLWNLEI---SN--QSFNIVDVKPANMEDLTEVITSAEFHPT 293 (408)
Q Consensus 254 ~-----------------------------------~i~iwd~~~---~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 293 (408)
. .|++||+.+ +. ....+. .+..+.+|...+..++|+||
T Consensus 193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~wspd 270 (740)
T 4a5s_A 193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT--APASMLIGDHYLCDVTWATQ 270 (740)
T ss_dssp TTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC--CCHHHHTSCEEEEEEEEEET
T ss_pred cCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec--CCccCCCCCeEEEEEEEeCC
Confidence 3 466677764 32 222210 00001136777999999999
Q ss_pred CCceEEEEeC----CCeEEEEEcCCCce---eccccccc--ccccCCCCcccccccccee-----EEEEEccCCCEEE-E
Q 015363 294 HCNMLAYSSS----KGSIRLIDMRQSAL---CDTHSKLF--EEQEAPGTRSFFTEIIASI-----SDIKFARNGRHIL-S 358 (408)
Q Consensus 294 ~~~~l~s~~~----dg~i~iwd~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~h~~~i-----~~~~~spdg~~l~-s 358 (408)
| ++++.... +..|.+||+.+++. +. .+..+ +.+ ...| ..+.|+|||+.|+ .
T Consensus 271 g-~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~-~~~~l~~~~~------------~~~v~~~~~~~p~fspDG~~l~~~ 336 (740)
T 4a5s_A 271 E-RISLQWLRRIQNYSVMDICDYDESSGRWNCL-VARQHIEMST------------TGWVGRFRPSEPHFTLDGNSFYKI 336 (740)
T ss_dssp T-EEEEEEEESSTTEEEEEEEEEETTTTEEEEC-GGGCEEEECS------------SSCSSSSSCCCCEECTTSSEEEEE
T ss_pred C-eEEEEEeCCCCCEEEEEEEECCCCcccccee-EEEEeeeccC------------CceEccCcCCCceEcCCCCEEEEE
Confidence 9 76665543 34799999998851 10 01111 222 2233 3678999999876 5
Q ss_pred eC--C--CeEEEEECCCCCCcee
Q 015363 359 RD--Y--MTLKLWDINMDSGPVA 377 (408)
Q Consensus 359 ~~--d--~~v~~wd~~~~~~~~~ 377 (408)
.+ + ..|++||+.. ++..+
T Consensus 337 ~s~~~G~~~l~~~~~~~-~~~~~ 358 (740)
T 4a5s_A 337 ISNEEGYRHICYFQIDK-KDCTF 358 (740)
T ss_dssp EECTTSCEEEEEEETTC-SSCEE
T ss_pred EEcCCCceEEEEEECCC-CceEe
Confidence 42 2 5788888875 44443
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=4.3e-16 Score=139.67 Aligned_cols=261 Identities=11% Similarity=0.036 Sum_probs=156.3
Q ss_pred EEECCCCCeEEEeec-CCe--EEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeE
Q 015363 41 IEFDKSGDHLATGDR-GGR--VVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK 117 (408)
Q Consensus 41 ~~~s~~~~~l~sg~~-dg~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~ 117 (408)
.+|+|||++||.++. +|. |.+||+.+++. .....++. ..+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~-----------------------~~lt~~~~------------~~~~~ 85 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA-----------------------TQLTEGRG------------DNTFG 85 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEE-----------------------EECCCSSC------------BCSSS
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCce-----------------------EEeeeCCC------------CCccc
Confidence 789999999998887 674 77778776642 12223333 33556
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccC--
Q 015363 118 IRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASN-- 195 (408)
Q Consensus 118 v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 195 (408)
+.|+|+ |+.|+.++.++.|++||+.+++...+...+... +.. .....+++++.+.........
T Consensus 86 ~~~spd--g~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~--------~~~-----~~~~~~~dg~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 86 GFLSPD--DDALFYVKDGRNLMRVDLATLEENVVYQVPAEW--------VGY-----GTWVANSDCTKLVGIEIRREDWV 150 (388)
T ss_dssp CEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEECCTTE--------EEE-----EEEEECTTSSEEEEEEEEGGGCC
T ss_pred eEEcCC--CCEEEEEeCCCeEEEEECCCCcceeeeechhhc--------ccc-----cceeECCCCCeeccccccCcccc
Confidence 789654 889999999999999999999877665543221 100 012346777766322110000
Q ss_pred ---c-----cccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-c------CCeEEEE
Q 015363 196 ---D-----SSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-D------DLRINLW 259 (408)
Q Consensus 196 ---~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~------d~~i~iw 259 (408)
. -.+....+..|.+|| +...+ .+.+ ..+...+..++|+| +|+.|+.. . ...|.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d-~~~g~-------~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~ 221 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVD-LKTGE-------STVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLI 221 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEE-TTTCC-------EEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEE
T ss_pred cccccchhhhhhccCCcceEEEEE-CCCCc-------eEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEE
Confidence 0 012344567788888 43321 1121 34456688999999 99988865 3 3377788
Q ss_pred eCCCCCceeeEeecCCCcccCCc--CCeEEEEEcCCCCceEEEEeC-CC----eEEEEEcCCCceecccccccccccCCC
Q 015363 260 NLEISNQSFNIVDVKPANMEDLT--EVITSAEFHPTHCNMLAYSSS-KG----SIRLIDMRQSALCDTHSKLFEEQEAPG 332 (408)
Q Consensus 260 d~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~ 332 (408)
|.. +..... +..+. ..+..++|+|+| +.|+..+. ++ .|++||+.+++.. .+..+.++.
T Consensus 222 d~~-~~~~~~--------l~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~~~--~l~~~~~~~--- 286 (388)
T 3pe7_A 222 NED-GTNMRK--------VKTHAEGESCTHEFWVPDG-SALVYVSYLKGSPDRFIYSADPETLENR--QLTSMPACS--- 286 (388)
T ss_dssp ETT-SCCCEE--------SCCCCTTEEEEEEEECTTS-SCEEEEEEETTCCCEEEEEECTTTCCEE--EEEEECCEE---
T ss_pred eCC-CCceEE--------eeeCCCCcccccceECCCC-CEEEEEecCCCCCcceEEEEecCCCceE--EEEcCCCce---
Confidence 876 333222 22233 357789999999 65654443 22 3999999988642 112222210
Q ss_pred Ccccccccc-ceeEEEEEccCCCEEEEe----------CCCeEEEEECCCCCCceeeeeeccc
Q 015363 333 TRSFFTEII-ASISDIKFARNGRHILSR----------DYMTLKLWDINMDSGPVATFQVHEH 384 (408)
Q Consensus 333 ~~~~~~~h~-~~i~~~~~spdg~~l~s~----------~d~~v~~wd~~~~~~~~~~~~~~~~ 384 (408)
|. .....+.|+|||+.|+.. .+..|++||+.+ + .+..+..+..
T Consensus 287 -------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~-~~~~l~~~~~ 340 (388)
T 3pe7_A 287 -------HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN-G-TQHRVARHDT 340 (388)
T ss_dssp -------EEEECTTSSEEEEEECCC------------CCCCEEEEEETTT-T-EEEEEEECCC
T ss_pred -------eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC-C-ceEEeccccC
Confidence 00 001123799999988753 247999999976 3 4456666654
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=8e-15 Score=130.09 Aligned_cols=216 Identities=8% Similarity=0.043 Sum_probs=129.6
Q ss_pred cceeEEEEeecCCCcEEEEEeCC----CeEEEEEcCC--CcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 113 EKINKIRWCQSANSALYLLSTND----KTIKLWKVQE--KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d----~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
..+..++|+| +|++|++++.+ +.|.+|++.. ++........... ..+..+++ +++.+
T Consensus 50 ~~p~~l~~sp--dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~-------------~~p~~~~~--dg~~l 112 (361)
T 3scy_A 50 ANPSYLIPSA--DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG-------------ADPCYLTT--NGKNI 112 (361)
T ss_dssp SCCCSEEECT--TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS-------------SCEEEEEE--CSSEE
T ss_pred CCCceEEECC--CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC-------------CCcEEEEE--CCCEE
Confidence 5578899965 48889888875 7999999875 5544333221110 01113444 77765
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceee-------ccccccceEEEEeCCCCCEEEEe--cCCeEE
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIY-------AHAHDYHINSISNNSDGETFISA--DDLRIN 257 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~ 257 (408)
+++...++.|.+|+ +............... ...+...+.+++|+|+|++++++ .++.|.
T Consensus 113 -----------~~~~~~~~~v~~~~-~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 113 -----------VTANYSGGSITVFP-IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp -----------EEEETTTTEEEEEE-BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred -----------EEEECCCCEEEEEE-eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 24445688999999 5432111100000000 01123346889999999976655 689999
Q ss_pred EEeCCCCCc----e-eeEe-ecCCCcccCCcCCeEEEEEcCCCCceEEEEe-CCCeEEEEEcCCCceecccccccccccC
Q 015363 258 LWNLEISNQ----S-FNIV-DVKPANMEDLTEVITSAEFHPTHCNMLAYSS-SKGSIRLIDMRQSALCDTHSKLFEEQEA 330 (408)
Q Consensus 258 iwd~~~~~~----~-~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 330 (408)
+|++..... . +... ..... ...+...+..++|+|+| +++++++ .++.|.+||+.++... .+..+...
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~~~g~~~--~~~~~~~~-- 254 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAF-KVAPGSGPRHLIFNSDG-KFAYLINEIGGTVIAFRYADGMLD--EIQTVAAD-- 254 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEE-ECCTTCCEEEEEECTTS-SEEEEEETTTCEEEEEEEETTEEE--EEEEEESC--
T ss_pred EEEEcCCCCcccccceeecccccce-ecCCCCCCeEEEEcCCC-CEEEEEcCCCCeEEEEEecCCceE--EeEEEecC--
Confidence 999874432 1 1100 00000 12234557899999999 7666666 6899999999876431 11111111
Q ss_pred CCCccccccccceeEEEEEccCCCEEEEe--C-CCeEEEEECC
Q 015363 331 PGTRSFFTEIIASISDIKFARNGRHILSR--D-YMTLKLWDIN 370 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~~l~s~--~-d~~v~~wd~~ 370 (408)
..+...+..++|+|||++|+++ . ++.|.+|+++
T Consensus 255 -------~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 255 -------TVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp -------SSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred -------CCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 1112346899999999998665 3 4899999996
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.72 E-value=1.8e-14 Score=128.02 Aligned_cols=220 Identities=10% Similarity=-0.010 Sum_probs=135.3
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcC-CCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQ-EKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
.+..++|+| +|++|++++.+ .|.+|++. +++.......... + .+..++++|+|+.+.
T Consensus 41 ~~~~~a~sp--dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-------g-------~~~~~~~spdg~~l~----- 98 (365)
T 1jof_A 41 PISWMTFDH--ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-------G-------HPRANDADTNTRAIF----- 98 (365)
T ss_dssp CCSEEEECT--TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-------S-------SGGGGCTTSCCEEEE-----
T ss_pred CCcEEEECC--CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-------C-------CCccEEECCCCCEEE-----
Confidence 478899965 48889888888 99999997 7765543322100 0 112578889998420
Q ss_pred ccCccccCCC-------------CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEE
Q 015363 193 ASNDSSFPPG-------------GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRIN 257 (408)
Q Consensus 193 ~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~ 257 (408)
++++. .++.+.+|+ +..... . ......+...+...+.+++|+|+|++++++ .++.|.
T Consensus 99 -----~~~~~~~~~~~~~~~~~~~~g~v~v~~-~~~~g~-~-~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~ 170 (365)
T 1jof_A 99 -----LLAAKQPPYAVYANPFYKFAGYGNVFS-VSETGK-L-EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLW 170 (365)
T ss_dssp -----EEECSSTTCCEEEEEESSSCCEEEEEE-ECTTCC-E-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred -----EEEecCCcceeccceeecCCceEEEEc-cCCCCc-C-cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEE
Confidence 13332 688899999 542111 0 011111101244678999999999988876 578999
Q ss_pred EEeCC-CCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeC-CCeEEEEEcC--CCceec--ccccccccccCC
Q 015363 258 LWNLE-ISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSS-KGSIRLIDMR--QSALCD--THSKLFEEQEAP 331 (408)
Q Consensus 258 iwd~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~--~~~~~~--~~~~~~~~~~~~ 331 (408)
+||+. ++. ......+ ....|...+..++|+|+| +++++++. ++.|.+|++. +++... ..+..+...
T Consensus 171 ~~~~~~~g~-~~~~~~~---~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~--- 242 (365)
T 1jof_A 171 THRKLASGE-VELVGSV---DAPDPGDHPRWVAMHPTG-NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG--- 242 (365)
T ss_dssp EEEECTTSC-EEEEEEE---ECSSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT---
T ss_pred EEEECCCCC-EEEeeeE---ecCCCCCCCCEeEECCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC---
Confidence 99997 333 2111111 012235568999999999 77776664 7899999875 443210 001111111
Q ss_pred CCccccccccc------eeEEEE-EccCCCEEEEeC--CC-----eEEEEECCCCCCce
Q 015363 332 GTRSFFTEIIA------SISDIK-FARNGRHILSRD--YM-----TLKLWDINMDSGPV 376 (408)
Q Consensus 332 ~~~~~~~~h~~------~i~~~~-~spdg~~l~s~~--d~-----~v~~wd~~~~~~~~ 376 (408)
+.+|.. .+..++ |+|||++|++++ ++ .|.+|+++..++..
T Consensus 243 -----~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 243 -----IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp -----CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred -----cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 112222 588999 999999988763 23 89999997335544
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=6e-15 Score=129.02 Aligned_cols=253 Identities=7% Similarity=0.067 Sum_probs=161.2
Q ss_pred ccceEEEEECCCCCeEEEeecC------------------------CeEEEEEeCCCCCCCCcccccccccccccCCCcc
Q 015363 35 VDIISAIEFDKSGDHLATGDRG------------------------GRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEF 90 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~d------------------------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 90 (408)
-+.|.+|+++|+|+++++...+ ++|.+||..+++.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--------------------- 81 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI--------------------- 81 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE---------------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE---------------------
Confidence 4668999999999999888777 3577777665532
Q ss_pred ceeeeec-cCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc-EEEEeccCCCCcccCCCCCeE
Q 015363 91 RYKTEFQ-SHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK-VKKVFDWNVHPEKAAGNGPIF 168 (408)
Q Consensus 91 ~~~~~~~-~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~v~ 168 (408)
...+. ++. .....+++. ++|.++++...++.|++|+..... ....+........ ..+
T Consensus 82 --~~~~~~~~~------------~~p~gia~d--~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~--~~~--- 140 (329)
T 3fvz_A 82 --LQSSGKNLF------------YLPHGLSID--TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGS--DQN--- 140 (329)
T ss_dssp --EEEECTTTC------------SSEEEEEEC--TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCC--STT---
T ss_pred --EeccCCCcc------------CCceEEEEC--CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCC--Ccc---
Confidence 12221 221 458899995 558888888889999999987552 2332221110000 000
Q ss_pred eecCCceeeEEcc-CCCeeecccccccCccccCCC-CCceeeeceeeeccccccccccceeec---------cccccceE
Q 015363 169 GSHVSAIPKSYMA-NGGCGERNFGCASNDSSFPPG-GVSSLRLPVVVTSQETNLVAGCRRIYA---------HAHDYHIN 237 (408)
Q Consensus 169 ~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~ 237 (408)
.-..+..++++| ++..+ ++.+ .++.|++|+ ... .....+. .++-....
T Consensus 141 -~~~~P~~ia~~~~~g~ly------------v~d~~~~~~I~~~~-~~g-------~~~~~~~~~g~~~~~~~~~~~~p~ 199 (329)
T 3fvz_A 141 -HFCQPTDVAVEPSTGAVF------------VSDGYCNSRIVQFS-PSG-------KFVTQWGEESSGSSPRPGQFSVPH 199 (329)
T ss_dssp -CCSSEEEEEECTTTCCEE------------EEECSSCCEEEEEC-TTS-------CEEEEECEECCSSSCCTTEESCEE
T ss_pred -ccCCCcEEEEeCCCCeEE------------EEeCCCCCeEEEEc-CCC-------CEEEEeccCCCCCCCCCcccCCCc
Confidence 001234789999 67664 5554 688888887 221 1111110 11224478
Q ss_pred EEEeCCC-CCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe-------CCCeEE
Q 015363 238 SISNNSD-GETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS-------SKGSIR 308 (408)
Q Consensus 238 ~i~~~~~-~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-------~dg~i~ 308 (408)
.++++|+ +.++++. .+++|++||..+ ++....+. ...+...+..++|+| + ..+++.+ .+..|+
T Consensus 200 gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~-----~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~ 271 (329)
T 3fvz_A 200 SLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIK-----HASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGF 271 (329)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEEC-----CTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEE
T ss_pred EEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEe-----ccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEE
Confidence 9999999 6666666 799999999983 44444322 234566788999999 4 4444433 345899
Q ss_pred EEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 309 LIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 309 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
+||+.+++.+ ..+... .++...+..++++|+|.++++.. ++.|++|++..
T Consensus 272 ~~~~~~g~~~----~~~~~~---------~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 272 VMNFSSGEII----DVFKPV---------RKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEETTTCCEE----EEECCS---------SSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEcCCCeEE----EEEcCC---------CCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 9999988654 333211 11235689999999997777764 59999999864
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.72 E-value=2.3e-16 Score=153.16 Aligned_cols=262 Identities=10% Similarity=-0.001 Sum_probs=154.0
Q ss_pred eEEEEECCCCCeEEEeec---------CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 38 ISAIEFDKSGDHLATGDR---------GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 38 V~~~~~s~~~~~l~sg~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
|.+++|||||++||+++. ++.|++||+.+++.. ....+ .
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~---------------------~~~~l---~-------- 109 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV---------------------RGNEL---P-------- 109 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC---------------------CSSCC---C--------
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc---------------------cceec---C--------
Confidence 899999999999999876 789999999877530 00011 1
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeec----------CCceeeE
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSH----------VSAIPKS 178 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----------~~~~~~~ 178 (408)
..+..++|+|+ |+.|+++. |+.|++|++.+++...+...... ..++... .....++
T Consensus 110 ----~~~~~~~~SPD--G~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~-------~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 110 ----RPIQYLCWSPV--GSKLAYVY-QNNIYLKQRPGDPPFQITFNGRE-------NKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp ----SSBCCEEECSS--TTCEEEEE-TTEEEEESSTTSCCEECCCCCBT-------TTEEESSCCHHHHHHTTCSSCCEE
T ss_pred ----cccccceECCC--CCEEEEEE-CCeEEEEeCCCCCcEEEecCCCc-------CCeEcccccceeeeecccCcccEE
Confidence 34888999765 88888875 78999999998876543321110 0011000 0112689
Q ss_pred EccCCCeeeccccccc--Ccc------------------ccCC--CCCceeeeceeeeccccc---cccccceeeccccc
Q 015363 179 YMANGGCGERNFGCAS--NDS------------------SFPP--GGVSSLRLPVVVTSQETN---LVAGCRRIYAHAHD 233 (408)
Q Consensus 179 ~~~~~~~l~~~~~~~~--~~~------------------~~~~--~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~ 233 (408)
|+|||+.|........ ..+ -..| .....|++|| +...... ....+ .. +..|.
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d-~~~~~~~~~~~~~~~-~~-~~~~~ 252 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIID-TTYPAYVGPQEVPVP-AM-IASSD 252 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEE-SSCHHHHCCEECCCC-HH-HHTSC
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEE-CCCCCccceeEccCC-cc-CCCCc
Confidence 9999998844321100 000 0001 1123677888 4332210 00000 11 24577
Q ss_pred cceEEEEeCCCCCEEEEe-c--C--CeEEEEe----CCCCCceeeEeecCCCcccCCcCCeE-----EEEEcCCCCceEE
Q 015363 234 YHINSISNNSDGETFISA-D--D--LRINLWN----LEISNQSFNIVDVKPANMEDLTEVIT-----SAEFHPTHCNMLA 299 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~-~--d--~~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~p~~~~~l~ 299 (408)
..+..++|+||++++++. . + ..|.+|| ..+ ++...+.. .....|...+. .+.|+|+| +.|+
T Consensus 253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~---~~~~~~~~~~~~~~~~~~~~spdg-~~l~ 327 (719)
T 1z68_A 253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQE---HIEESRTGWAGGFFVSTPVFSYDA-ISYY 327 (719)
T ss_dssp EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGE---EEEECSSSCSSSSSCCCCEECTTS-SCEE
T ss_pred ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEe---cccccCCceEccccCCccEECCCC-CeEE
Confidence 889999999998877764 2 2 3588889 663 33322210 00024555555 78999999 6444
Q ss_pred E--EeCCC--eEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe-CC-----CeEEEEEC
Q 015363 300 Y--SSSKG--SIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-DY-----MTLKLWDI 369 (408)
Q Consensus 300 s--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~d-----~~v~~wd~ 369 (408)
. ...++ .|.+||+.+++. ..+..+ ...+..+.++ +++.|+.. .+ +.+++|.+
T Consensus 328 ~~~~~~~g~~~l~~~~~~~~~~-----~~lt~~------------~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 328 KIFSDKDGYKHIHYIKDTVENA-----IQITSG------------KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp EEEECTTSCEEEEEESSCSTTC-----EECSCS------------SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred EEEEccCCceEEEEEECCCCce-----EecccC------------ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 3 44455 577777766542 233322 2346777777 77766654 33 78899988
Q ss_pred CC
Q 015363 370 NM 371 (408)
Q Consensus 370 ~~ 371 (408)
..
T Consensus 390 ~~ 391 (719)
T 1z68_A 390 SI 391 (719)
T ss_dssp EC
T ss_pred eC
Confidence 65
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=1.4e-15 Score=146.16 Aligned_cols=282 Identities=10% Similarity=0.036 Sum_probs=165.3
Q ss_pred ceeeccceEEEEECCCCCeEEEe--ecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 31 EVQEVDIISAIEFDKSGDHLATG--DRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 31 ~~~h~~~V~~~~~s~~~~~l~sg--~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
...|...|..++|++++.++++. +.++...||....+.. ...+..|.
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------------------~~~l~~~~-------- 67 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA-----------------------EESALPAP-------- 67 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC-----------------------EEESSCTT--------
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC-----------------------cceeCCCC--------
Confidence 34688899999999887777776 5588999999643221 12233333
Q ss_pred ccccccee---------EEEEeecCCCcE-EEEEeC-CCeEEEEEcC--C-CcEEEEeccCCCCcccCCCCCeEeecCCc
Q 015363 109 LEIEEKIN---------KIRWCQSANSAL-YLLSTN-DKTIKLWKVQ--E-KKVKKVFDWNVHPEKAAGNGPIFGSHVSA 174 (408)
Q Consensus 109 ~~~~~~v~---------~v~~~p~~~~~~-l~~~~~-d~~i~vwd~~--~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 174 (408)
..+. ...|+.+|||+. |+.++. +..|.++++. + ++........... ....+.
T Consensus 68 ----~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~----~~~~~~------ 133 (662)
T 3azo_A 68 ----WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVG----GGLRWA------ 133 (662)
T ss_dssp ----CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCST----TCEEEE------
T ss_pred ----ccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCC----CCcccc------
Confidence 1233 556763356877 766553 5667777766 3 4433322211000 011122
Q ss_pred eeeEEccCCCeeecccccccCccccCCCCC----------ceeeeceeeeccccccccccceeecc-ccccceEEEEeCC
Q 015363 175 IPKSYMANGGCGERNFGCASNDSSFPPGGV----------SSLRLPVVVTSQETNLVAGCRRIYAH-AHDYHINSISNNS 243 (408)
Q Consensus 175 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~ 243 (408)
.++|+|||+.+ +..+.+ ..|.+|+ +........ ...+.+ . .+...+..++|+|
T Consensus 134 -~~~~spDg~~l------------~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~-~~~~~l-~~~~~~~~~~~~~Sp 197 (662)
T 3azo_A 134 -DPVLLPERGEV------------WCMAEEFTGEGPSDVRRFLAAVP-LDGSAAADR-SAVREL-SDDAHRFVTGPRLSP 197 (662)
T ss_dssp -EEEEETTTTEE------------EEEEEEECSSSTTCEEEEEEEEE-TTSTTTTCG-GGSEES-SCSCSSEECCCEECT
T ss_pred -CcEECCCCCEE------------EEEEecccCCCCCCceeEEEEEE-CCCCccccC-CceeEE-EecCCCcccCceECC
Confidence 68999999987 444433 5788887 432100000 111222 3 4446678899999
Q ss_pred CCCEEEEe-cC--------CeEEEEeCCCCC---ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCC--eEEE
Q 015363 244 DGETFISA-DD--------LRINLWNLEISN---QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG--SIRL 309 (408)
Q Consensus 244 ~~~~l~~~-~d--------~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg--~i~i 309 (408)
||+.|+.+ .+ ..|++||+...+ ....+ ...+...+..+.|+|+| ++++++..++ .|.+
T Consensus 198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l-------~~~~~~~~~~~~~spdg-~l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL-------LGGPEEAIAQAEWAPDG-SLIVATDRTGWWNLHR 269 (662)
T ss_dssp TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE-------EEETTBCEEEEEECTTS-CEEEEECTTSSCEEEE
T ss_pred CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe-------CCCCCceEcceEECCCC-eEEEEECCCCCeEEEE
Confidence 99999876 33 379999998323 33322 23346778999999999 6888887788 6666
Q ss_pred EEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCceeeeeecccccceE
Q 015363 310 IDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKV 389 (408)
Q Consensus 310 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~ 389 (408)
||+.+++.. .....+...... .+ .-.+..++|+|+++++++++++.++||.++..+..++.+..|......+
T Consensus 270 ~~~~~~~~~----~l~~~~~~~~~p-~w---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 341 (662)
T 3azo_A 270 VDPATGAAT----QLCRREEEFAGP-LW---TPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGPWTEWAAT 341 (662)
T ss_dssp ECTTTCCEE----ESSCCSSBSSCC-CC---STTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSSCCEEEEE
T ss_pred EECCCCcee----ecccccccccCc-cc---cccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCCCCeEEEE
Confidence 776565432 122222100000 00 0114568999999999988448888885543334567777665544333
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=2.1e-15 Score=132.97 Aligned_cols=214 Identities=7% Similarity=0.024 Sum_probs=138.2
Q ss_pred EEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCcc
Q 015363 118 IRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDS 197 (408)
Q Consensus 118 v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 197 (408)
++++ +++.++++++.+++|.+||+.+++....+...... .+..++++|+|+.+
T Consensus 5 ~~~~--~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~--------------~~~~~~~s~dg~~~----------- 57 (349)
T 1jmx_B 5 PALK--AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF--------------GPGTAMMAPDNRTA----------- 57 (349)
T ss_dssp CCCC--TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCC--------------SSCEEEECTTSSEE-----------
T ss_pred cccc--CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCC--------------CCceeEECCCCCEE-----------
Confidence 4453 45778899999999999999999877766543200 01268899999865
Q ss_pred ccCCCCCceeeeceeeeccccccccccceeecccc-----ccceEEEEeCCCCCEEEEe-cC------------CeEEEE
Q 015363 198 SFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAH-----DYHINSISNNSDGETFISA-DD------------LRINLW 259 (408)
Q Consensus 198 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~i~~~~~~~~l~~~-~d------------~~i~iw 259 (408)
+++...++.|.+|| +...+ ....+...+ ...+..++|+|+|++|+++ .+ +.|.+|
T Consensus 58 ~v~~~~~~~i~~~d-~~t~~------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~ 130 (349)
T 1jmx_B 58 YVLNNHYGDIYGID-LDTCK------NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 130 (349)
T ss_dssp EEEETTTTEEEEEE-TTTTE------EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred EEEeCCCCcEEEEe-CCCCc------EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEE
Confidence 24556788999999 43221 111111111 2346789999999999987 44 999999
Q ss_pred eCCCCCce--eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccC--C----
Q 015363 260 NLEISNQS--FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA--P---- 331 (408)
Q Consensus 260 d~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~---- 331 (408)
|+.+.... ... .. +...+.+++|+|++ + +++++ +.|.+||+.+++.. ..+..... +
T Consensus 131 d~~~~~~~~~~~~-------~~-~~~~~~~~~~s~dg-~-l~~~~--~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~ 194 (349)
T 1jmx_B 131 STADGLEAKPVRT-------FP-MPRQVYLMRAADDG-S-LYVAG--PDIYKMDVKTGKYT----VALPLRNWNRKGYSA 194 (349)
T ss_dssp EGGGGGGBCCSEE-------EE-CCSSCCCEEECTTS-C-EEEES--SSEEEECTTTCCEE----EEECSTTCCCTTBCC
T ss_pred ECCCccccceeee-------cc-CCCcccceeECCCC-c-EEEcc--CcEEEEeCCCCcee----ccccccccCCccccC
Confidence 99853221 111 11 23357889999999 6 44444 34999999988654 22211100 0
Q ss_pred ----------CCccc----------------------------------------cccccceeEEEEEcc-CCCEEEEeC
Q 015363 332 ----------GTRSF----------------------------------------FTEIIASISDIKFAR-NGRHILSRD 360 (408)
Q Consensus 332 ----------~~~~~----------------------------------------~~~h~~~i~~~~~sp-dg~~l~s~~ 360 (408)
..... +..+...+..++|+| ||++|+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~- 273 (349)
T 1jmx_B 195 PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV- 273 (349)
T ss_dssp CBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-
T ss_pred ccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-
Confidence 00000 000112456788999 99999988
Q ss_pred CCeEEEEECCCCCCceeeeeecc
Q 015363 361 YMTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 361 d~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
++.|.+||+.+ ++.++.+....
T Consensus 274 ~~~v~~~d~~~-~~~~~~~~~~~ 295 (349)
T 1jmx_B 274 LNRLAKYDLKQ-RKLIKAANLDH 295 (349)
T ss_dssp ESEEEEEETTT-TEEEEEEECSS
T ss_pred cCeEEEEECcc-CeEEEEEcCCC
Confidence 88999999987 67777776443
No 166
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.69 E-value=8.1e-15 Score=128.49 Aligned_cols=209 Identities=12% Similarity=0.072 Sum_probs=138.3
Q ss_pred cEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCce
Q 015363 127 ALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSS 206 (408)
Q Consensus 127 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (408)
.++++++.++.|.+||+.+++....+...... + .+..++++|+|+.+ +++...++.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~------~-------~~~~~~~s~dg~~l-----------~v~~~~~~~ 57 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAG------P-------TPMVPMVAPGGRIA-----------YATVNKSES 57 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCT------T-------CCCCEEECTTSSEE-----------EEEETTTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCC------C-------CccceEEcCCCCEE-----------EEEeCCCCe
Confidence 47889999999999999999877766543200 0 01168999999865 355667889
Q ss_pred eeeceeeeccccccccccceeeccc----cccceEEEEeCCCCCEEEEe-------------cCCeEEEEeCCCCCceee
Q 015363 207 LRLPVVVTSQETNLVAGCRRIYAHA----HDYHINSISNNSDGETFISA-------------DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 207 i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~i~~~~~~~~l~~~-------------~d~~i~iwd~~~~~~~~~ 269 (408)
|.+|| +...+ ....+... +...+..++|+|+++.++++ .++.|.+||+.+ .+...
T Consensus 58 v~~~d-~~~~~------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~ 129 (337)
T 1pby_B 58 LVKID-LVTGE------TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-LSRRK 129 (337)
T ss_dssp EEEEE-TTTCC------EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-TEEEE
T ss_pred EEEEE-CCCCC------eEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC-CcEEE
Confidence 99999 43322 11211111 12356789999999888876 369999999984 44433
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceeccccccccccc--C-----CCCc--------
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQE--A-----PGTR-------- 334 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~-----~~~~-------- 334 (408)
.+ .. ...+.+++|+|++ ++|+++ ++.|.+||+.+++.. ..+..+. . +...
T Consensus 130 ~~-------~~-~~~~~~~~~s~dg-~~l~~~--~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~s~dg~~l~~~~~~ 194 (337)
T 1pby_B 130 AF-------EA-PRQITMLAWARDG-SKLYGL--GRDLHVMDPEAGTLV----EDKPIQSWEAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp EE-------EC-CSSCCCEEECTTS-SCEEEE--SSSEEEEETTTTEEE----EEECSTTTTTTTBCCCBCCCCCCCCTT
T ss_pred EE-------eC-CCCcceeEECCCC-CEEEEe--CCeEEEEECCCCcEe----eeeeccccCCCceeCCCccEEeeeccC
Confidence 32 11 3346788999999 777776 688999999988653 1111111 0 0000
Q ss_pred ---------------------------------------cccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCc
Q 015363 335 ---------------------------------------SFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGP 375 (408)
Q Consensus 335 ---------------------------------------~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~ 375 (408)
..+..+...+.+++|+|||++|+++ ++.|.+||+.+ ++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~-~~~ 272 (337)
T 1pby_B 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEK-NAS 272 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTT-TEE
T ss_pred CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCC-CcC
Confidence 0011222346679999999999988 78999999987 677
Q ss_pred eeeeeeccc
Q 015363 376 VATFQVHEH 384 (408)
Q Consensus 376 ~~~~~~~~~ 384 (408)
+..+..+..
T Consensus 273 ~~~~~~~~~ 281 (337)
T 1pby_B 273 IKRVPLPHS 281 (337)
T ss_dssp EEEEECSSC
T ss_pred cceecCCCc
Confidence 777765433
No 167
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.67 E-value=3e-15 Score=141.65 Aligned_cols=204 Identities=11% Similarity=0.052 Sum_probs=133.9
Q ss_pred cceeEEEEeecCCCcEEEEEeC-CCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 113 EKINKIRWCQSANSALYLLSTN-DKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
.+|.+++|+|+ |++||+++. ||+++||++.+++..+....+. ..+. .+.|+|+ +.+
T Consensus 22 ~~~~~~~~~~D--G~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~--------~~~~-------~~~~spd-~~l----- 78 (582)
T 3o4h_A 22 VEKYSLQGVVD--GDKLLVVGFSEGSVNAYLYDGGETVKLNREPI--------NSVL-------DPHYGVG-RVI----- 78 (582)
T ss_dssp SCEEEEEEEET--TTEEEEEEEETTEEEEEEEETTEEEECCSSCC--------SEEC-------EECTTCS-EEE-----
T ss_pred cchheeecCCC--CCeEEEEEccCCceeEEEEcCCCcEeeecccc--------cccc-------cccCCCC-eEE-----
Confidence 56999999876 889999886 9999999997777655443321 1122 5788888 554
Q ss_pred cccCccccCCCC---Cceeeeceeeecc-ccccccccceeeccccccceEEEEeCCCCC--EEEEecCCeEEEEeCCCCC
Q 015363 192 CASNDSSFPPGG---VSSLRLPVVVTSQ-ETNLVAGCRRIYAHAHDYHINSISNNSDGE--TFISADDLRINLWNLEISN 265 (408)
Q Consensus 192 ~~~~~~~~~~~~---~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~l~~~~d~~i~iwd~~~~~ 265 (408)
++++. +....+|. +... +.. .. .+... ..+...+|+|+++ .++++.++.+.+||+.+ +
T Consensus 79 -------~~~~~~~g~~~~~l~~-~~~~~~g~----~~-~l~~~--~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~-g 142 (582)
T 3o4h_A 79 -------LVRDVSKGAEQHALFK-VNTSRPGE----EQ-RLEAV--KPMRILSGVDTGEAVVFTGATEDRVALYALDG-G 142 (582)
T ss_dssp -------EEEECSTTSCCEEEEE-EETTSTTC----CE-ECTTS--CSBEEEEEEECSSCEEEEEECSSCEEEEEEET-T
T ss_pred -------EEeccCCCCcceEEEE-EeccCCCc----cc-cccCC--CCceeeeeCCCCCeEEEEecCCCCceEEEccC-C
Confidence 54332 44556665 3220 111 11 11111 1233557777775 34445555556999984 4
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC----CeEEEEEcCCCceecccccccccccCCCCcccccccc
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK----GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEII 341 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 341 (408)
....+ ..+.. .+++|+||| ++|++++.+ +.|++||+.+++. ..+..+ .
T Consensus 143 ~~~~l--------~~~~~--~~~~~spDG-~~la~~~~~~~~~~~i~~~d~~~g~~-----~~l~~~------------~ 194 (582)
T 3o4h_A 143 GLREL--------ARLPG--FGFVSDIRG-DLIAGLGFFGGGRVSLFTSNLSSGGL-----RVFDSG------------E 194 (582)
T ss_dssp EEEEE--------EEESS--CEEEEEEET-TEEEEEEEEETTEEEEEEEETTTCCC-----EEECCS------------S
T ss_pred cEEEe--------ecCCC--ceEEECCCC-CEEEEEEEcCCCCeEEEEEcCCCCCc-----eEeecC------------C
Confidence 43333 11222 789999999 899988777 7899999988754 334444 3
Q ss_pred ceeEEEEEccCCCEEEEeC-CC--eEEEEECCCCCCceeeeeecccc
Q 015363 342 ASISDIKFARNGRHILSRD-YM--TLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 342 ~~i~~~~~spdg~~l~s~~-d~--~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
..+..++|||||++|++++ ++ .|++||+++ ++.. .+.+|...
T Consensus 195 ~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~-~~~~-~~~~~~~~ 239 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLETAREARLVTVDPRD-GSVE-DLELPSKD 239 (582)
T ss_dssp CEEEEEEECTTSCEEEEEECSSCEEEEEECTTT-CCEE-ECCCSCSH
T ss_pred CccccceECCCCCEEEEccCCCeeEEEEEcCCC-CcEE-EccCCCcC
Confidence 6789999999999999764 56 899999987 5665 66666554
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=7.3e-15 Score=131.64 Aligned_cols=257 Identities=9% Similarity=0.007 Sum_probs=146.6
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
|...+..+.|+|||+.|+.++.++.|++||+.+++.. ..+..+. .
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~-----------------------~~~~~~~------------~ 123 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN-----------------------VVYQVPA------------E 123 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE-----------------------EEEECCT------------T
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce-----------------------eeeechh------------h
Confidence 3444556789999999999999999999999877531 1222232 2
Q ss_pred ceeEEEEeecCCCcEEEEE----------------------eCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeec
Q 015363 114 KINKIRWCQSANSALYLLS----------------------TNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSH 171 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~----------------------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (408)
.+....|..++++.+++.. ..+..|.+||+.+++...+..... .+.
T Consensus 124 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~---------~~~--- 191 (388)
T 3pe7_A 124 WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ---------WLG--- 191 (388)
T ss_dssp EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS---------CEE---
T ss_pred cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc---------ccc---
Confidence 3444555445668777642 245789999999987666543321 122
Q ss_pred CCceeeEEcc-CCCeeecccccccCccccCCC---CCceeeeceeeeccccccccccceeeccccc-cceEEEEeCCCCC
Q 015363 172 VSAIPKSYMA-NGGCGERNFGCASNDSSFPPG---GVSSLRLPVVVTSQETNLVAGCRRIYAHAHD-YHINSISNNSDGE 246 (408)
Q Consensus 172 ~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~~~~~ 246 (408)
.+.|+| +|+.+.... ... ....|.+++ .... ..+.+...+. ..+..++|+|||+
T Consensus 192 ----~~~~sp~dg~~l~~~~---------~~~~~~~~~~l~~~d-~~~~-------~~~~l~~~~~~~~~~~~~~spdg~ 250 (388)
T 3pe7_A 192 ----HPIYRPYDDSTVAFCH---------EGPHDLVDARMWLIN-EDGT-------NMRKVKTHAEGESCTHEFWVPDGS 250 (388)
T ss_dssp ----EEEEETTEEEEEEEEE---------CSCTTTSSCSEEEEE-TTSC-------CCEESCCCCTTEEEEEEEECTTSS
T ss_pred ----ccEECCCCCCEEEEEE---------ecCCCCCcceEEEEe-CCCC-------ceEEeeeCCCCcccccceECCCCC
Confidence 578999 998762111 011 123455544 2211 1122212221 3577889999999
Q ss_pred EEEEe--cCC----eEEEEeCCCCCceeeEeecCCCcccCCcCC---eEEEEEcCCCCceEEEE---------eCCCeEE
Q 015363 247 TFISA--DDL----RINLWNLEISNQSFNIVDVKPANMEDLTEV---ITSAEFHPTHCNMLAYS---------SSKGSIR 308 (408)
Q Consensus 247 ~l~~~--~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~p~~~~~l~s~---------~~dg~i~ 308 (408)
.|+.. .++ .|++||+.++.. ..+.. +.++... ...+.|+|+| +.|+.. ..+..|+
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~-----~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 251 ALVYVSYLKGSPDRFIYSADPETLEN-RQLTS-----MPACSHLMSNYDGSLMVGDG-SDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp CEEEEEEETTCCCEEEEEECTTTCCE-EEEEE-----ECCEEEEEECTTSSEEEEEE-CCC------------CCCCEEE
T ss_pred EEEEEecCCCCCcceEEEEecCCCce-EEEEc-----CCCceeeeecCCCCeEccCC-CcceeEeeeccccccCCCCEEE
Confidence 77653 322 399999985442 22211 1111000 1123799999 655543 4567999
Q ss_pred EEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC--CCeEEEEECCC
Q 015363 309 LIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD--YMTLKLWDINM 371 (408)
Q Consensus 309 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--d~~v~~wd~~~ 371 (408)
+||+.+++. ..+..+... ......+....+..++|+|||+.|+..+ ++...||.++.
T Consensus 324 ~~d~~~~~~-----~~l~~~~~~-~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 324 VFNMKNGTQ-----HRVARHDTS-WKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EEETTTTEE-----EEEEECCCC-CCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EEeccCCce-----EEeccccCc-ccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 999998754 233333110 0000000011467789999999888663 46666776543
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.66 E-value=1.2e-14 Score=130.54 Aligned_cols=263 Identities=10% Similarity=0.043 Sum_probs=155.1
Q ss_pred eccceEEEEECCCCCeEEEeecC---CeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRG---GRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
|...+.+++|+|||++|+..... ..|.+|++.+++. ..+..+..
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~------------------------~~l~~~~~--------- 80 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA------------------------VQLTEGKG--------- 80 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE------------------------EECCCSSC---------
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE------------------------EEeecCCC---------
Confidence 44447889999999998877543 3678888776642 11222220
Q ss_pred cccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCC--c-----eeeEEccCC
Q 015363 111 IEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVS--A-----IPKSYMANG 183 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-----~~~~~~~~~ 183 (408)
.....+.|+| +|++|+.++.++.|.+||+.+++...+...+... .+.+........ . ....++|++
T Consensus 81 --~~~~~~~~sp--dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~---~~~g~~l~~~~~~~~~~~~~~~~~~spdg 153 (396)
T 3c5m_A 81 --DNTFGGFIST--DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEW---KGYGTWVANSDCTKLVGIEILKRDWQPLT 153 (396)
T ss_dssp --BCTTTCEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE---EEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred --CccccceECC--CCCEEEEEEcCCcEEEEECCCCCcEEEEeccccc---CCCCCEEEeccCCccccccccccccCCCC
Confidence 1133478965 4889999999999999999998876665543211 001100000000 0 013456666
Q ss_pred CeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cC------Ce
Q 015363 184 GCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DD------LR 255 (408)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d------~~ 255 (408)
+.+..... .....+..|.+|| +...+ ... + ..+...+..+.|+| ++..|+.. .+ ..
T Consensus 154 ~~~~~~~~-------~~~~~~~~l~~~d-~~~g~------~~~-~-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~ 217 (396)
T 3c5m_A 154 SWEKFAEF-------YHTNPTCRLIKVD-IETGE------LEV-I-HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDAR 217 (396)
T ss_dssp SHHHHHHH-------HHTCCCEEEEEEE-TTTCC------EEE-E-EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCC
T ss_pred cceeeeee-------ccCCCcceEEEEE-CCCCc------EEe-e-ccCCcccccceECCCCCCEEEEEecCCCCCCCce
Confidence 65410000 0114667788888 43211 111 1 24456788999999 78766654 32 47
Q ss_pred EEEEeCCCCCceeeEeecCCCcccCC--cCCeEEEEEcCCCCceEEEEeCC-----CeEEEEEcCCCceecccccccccc
Q 015363 256 INLWNLEISNQSFNIVDVKPANMEDL--TEVITSAEFHPTHCNMLAYSSSK-----GSIRLIDMRQSALCDTHSKLFEEQ 328 (408)
Q Consensus 256 i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~ 328 (408)
|.+||+.. ..... +..+ ...+..++|+|+| +.|+.++.+ +.|++||+.+++.. .+...
T Consensus 218 l~~~d~~~-~~~~~--------l~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~~~-----~l~~~ 282 (396)
T 3c5m_A 218 MWLVNEDG-SNVRK--------IKEHAEGESCTHEFWIPDG-SAMAYVSYFKGQTDRVIYKANPETLENE-----EVMVM 282 (396)
T ss_dssp CEEEETTS-CCCEE--------SSCCCTTEEEEEEEECTTS-SCEEEEEEETTTCCEEEEEECTTTCCEE-----EEEEC
T ss_pred EEEEECCC-CceeE--------eeccCCCccccceEECCCC-CEEEEEecCCCCccceEEEEECCCCCeE-----EeeeC
Confidence 88888873 33222 1222 2357889999999 766666543 45999999887542 11111
Q ss_pred cCCCCccccccccceeEEEEEcc-CCCEEEEeC-----------------CCeEEEEECCCCCCceeeeeecc
Q 015363 329 EAPGTRSFFTEIIASISDIKFAR-NGRHILSRD-----------------YMTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 329 ~~~~~~~~~~~h~~~i~~~~~sp-dg~~l~s~~-----------------d~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
.... +.|+| ||++|+++. +..|++||+.+ ++ +..+..+.
T Consensus 283 -------------~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~-~~-~~~l~~~~ 339 (396)
T 3c5m_A 283 -------------PPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA-KS-AQKLCKHS 339 (396)
T ss_dssp -------------CSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT-TB-CCEEEECC
T ss_pred -------------CCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc-Cc-eEEccCCC
Confidence 0122 88999 999888642 37899999976 44 34555544
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.66 E-value=1e-13 Score=119.35 Aligned_cols=250 Identities=8% Similarity=-0.048 Sum_probs=154.7
Q ss_pred eccceEEEEECCCCC-eEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 34 EVDIISAIEFDKSGD-HLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 34 h~~~V~~~~~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
+.....+++|+|+|+ +++++..++.|.+|+..++ . ..+..+.
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~------------------------~~~~~~~------------ 68 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L------------------------SPEMHPS------------ 68 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E------------------------EEEESSC------------
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e------------------------EEEECCC------------
Confidence 445678999999998 7888888999999997754 2 2333333
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc--
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF-- 190 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~-- 190 (408)
..+.++++. ++|.++++...++.|.+||..+++........... ....+..+++.|+|+...+-.
T Consensus 69 ~~~~~l~~~--~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~-----------~~~~~~~i~~d~~G~l~vtd~~~ 135 (296)
T 3e5z_A 69 HHQNGHCLN--KQGHLIACSHGLRRLERQREPGGEWESIADSFEGK-----------KLNSPNDVCLAPDGSLWFSDPTY 135 (296)
T ss_dssp SSEEEEEEC--TTCCEEEEETTTTEEEEECSTTCCEEEEECEETTE-----------ECCCCCCEEECTTSCEEEEECSH
T ss_pred CCcceeeEC--CCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCC-----------CCCCCCCEEECCCCCEEEECCcc
Confidence 458899995 45877777667799999999888765543221110 001122578888888651100
Q ss_pred ccccCc---cccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCc
Q 015363 191 GCASND---SSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQ 266 (408)
Q Consensus 191 ~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~ 266 (408)
+..... ........+.|..++ .. . . ...+ ..+....+.++|+|+++.+++. .++.|.+|++...+.
T Consensus 136 g~~~~~~~~~~~~~~~~~~l~~~~---~~-g----~-~~~~-~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~ 205 (296)
T 3e5z_A 136 GIDKPEEGYGGEMELPGRWVFRLA---PD-G----T-LSAP-IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE 205 (296)
T ss_dssp HHHCGGGSSCCCCCSSSCEEEEEC---TT-S----C-EEEE-ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC
T ss_pred ccccccccccccccCCCcEEEEEC---CC-C----C-EEEe-ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc
Confidence 000000 000000123344333 11 1 1 1111 3344567899999999998666 789999999973333
Q ss_pred e---eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccce
Q 015363 267 S---FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIAS 343 (408)
Q Consensus 267 ~---~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 343 (408)
. ... +..+...+..++++++| +++++. ++.|.+||.. ++.. ..+..+ ..
T Consensus 206 ~~~~~~~-------~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~~~-g~~~----~~~~~~------------~~- 257 (296)
T 3e5z_A 206 TEYQGVH-------FTVEPGKTDGLRVDAGG-LIWASA--GDGVHVLTPD-GDEL----GRVLTP------------QT- 257 (296)
T ss_dssp EEEEEEE-------ECCSSSCCCSEEEBTTS-CEEEEE--TTEEEEECTT-SCEE----EEEECS------------SC-
T ss_pred CcCCCeE-------eeCCCCCCCeEEECCCC-CEEEEc--CCeEEEECCC-CCEE----EEEECC------------CC-
Confidence 3 122 11234456789999999 766665 8899999986 4333 344444 24
Q ss_pred eEEEEE-ccCCCEEEEeCCCeEEEEECCC
Q 015363 344 ISDIKF-ARNGRHILSRDYMTLKLWDINM 371 (408)
Q Consensus 344 i~~~~~-spdg~~l~s~~d~~v~~wd~~~ 371 (408)
+.+++| +|+++.|+.++.+.+.-++.++
T Consensus 258 ~~~~~f~~~d~~~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVSTEFWSIETNV 286 (296)
T ss_dssp CCEEEEESTTSCEEEEEETTEEEEEECSC
T ss_pred ceeEEEECCCCCEEEEEcCCeEEEEEccc
Confidence 788999 5899988888665666666654
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.64 E-value=2.2e-14 Score=139.35 Aligned_cols=210 Identities=12% Similarity=0.102 Sum_probs=134.0
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
....++.|+|+ |++++++ |++|++||+.+++....+..+..... .+ ....+.|+|||+.+
T Consensus 17 ~~~~~~~w~~d--g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~Spdg~~l------ 76 (740)
T 4a5s_A 17 LKLYSLRWISD--HEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEF-----GH-----SINDYSISPDGQFI------ 76 (740)
T ss_dssp CCCCCEEECSS--SEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTC-----CS-----CCCEEEECTTSSEE------
T ss_pred ccccccEECCC--CcEEEEc--CCcEEEEECCCCceEEEEechhhhhh-----cc-----cccceEECCCCCEE------
Confidence 34668999755 7777775 99999999999988777665432100 00 00136889999987
Q ss_pred ccCccccCCCCC---------ceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCC
Q 015363 193 ASNDSSFPPGGV---------SSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEI 263 (408)
Q Consensus 193 ~~~~~~~~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~ 263 (408)
+.++.+ +.+.+|| +...+ +. . +..+...+..++|||||+.||.+.++.|++||+.+
T Consensus 77 ------~~~~~~~~~~r~~~~~~~~~~d-~~~~~------~~-~-l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~ 141 (740)
T 4a5s_A 77 ------LLEYNYVKQWRHSYTASYDIYD-LNKRQ------LI-T-EERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPN 141 (740)
T ss_dssp ------EEEEEEEECSSSCEEEEEEEEE-TTTTE------EC-C-SSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTT
T ss_pred ------EEEECCeeeEEEccceEEEEEE-CCCCc------EE-E-cccCCCcceeeEECCCCCEEEEEECCeEEEEECCC
Confidence 444443 5667888 43322 11 1 24566779999999999999998889999999984
Q ss_pred CCceeeEeecCCCcccCCcCCe-----------------EEEEEcCCCCceEEEEeCCC---------------------
Q 015363 264 SNQSFNIVDVKPANMEDLTEVI-----------------TSAEFHPTHCNMLAYSSSKG--------------------- 305 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~p~~~~~l~s~~~dg--------------------- 305 (408)
+. ..++ +..++...+ ..+.||||| +.||.++.|.
T Consensus 142 ~~-~~~l------t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 142 LP-SYRI------TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp SC-CEEC------CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred Cc-eEEE------cCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 43 3322 122222222 358999999 8888775432
Q ss_pred ---------------eEEEEEcCC---CceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe----CC-C
Q 015363 306 ---------------SIRLIDMRQ---SALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR----DY-M 362 (408)
Q Consensus 306 ---------------~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~----~d-~ 362 (408)
+|++||+.+ +... . ...+... ..+.+|...+..++|+|||+.++.. ++ .
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~-~-~~~l~~~------~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~ 285 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA-T-SIQITAP------ASMLIGDHYLCDVTWATQERISLQWLRRIQNYS 285 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEETTSCCSSSCC-C-EEEECCC------HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEE
T ss_pred eeecCCCCcCcCCeeEEEEEECCCCCCCCcc-e-EEEecCC------ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEE
Confidence 466666665 4210 0 0111110 0011245779999999999977654 22 5
Q ss_pred eEEEEECCCCCC
Q 015363 363 TLKLWDINMDSG 374 (408)
Q Consensus 363 ~v~~wd~~~~~~ 374 (408)
.|++||+.+ ++
T Consensus 286 ~i~~~d~~t-g~ 296 (740)
T 4a5s_A 286 VMDICDYDE-SS 296 (740)
T ss_dssp EEEEEEEET-TT
T ss_pred EEEEEECCC-Cc
Confidence 799999987 55
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.64 E-value=4.9e-14 Score=124.66 Aligned_cols=261 Identities=10% Similarity=0.021 Sum_probs=148.2
Q ss_pred EEEECCCCCeEEEee----------cCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 40 AIEFDKSGDHLATGD----------RGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 40 ~~~~s~~~~~l~sg~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
.++|+|||++|+++. .++.|.+||..+.+. ...+...... .
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-----------------------~~~i~~~~~~------~ 104 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-----------------------EKEISLPPKR------V 104 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-----------------------EEEEEECTTB------C
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE-----------------------EEEEEcCccc------c
Confidence 899999999998886 367899999876542 1222211000 0
Q ss_pred ccccceeEEEEeecCCCcEEEEEeC--CCeEEEEEcCCCcEEEE-eccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTN--DKTIKLWKVQEKKVKKV-FDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
........++++| +|++|+++.. +++|.+||+.+++.... +...... .+...|++...
T Consensus 105 ~~g~~p~~i~~sp--dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~-----------------~v~~~p~~~~~ 165 (361)
T 2oiz_A 105 QGLNYDGLFRQTT--DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCW-----------------SVIPQPNRPRS 165 (361)
T ss_dssp CBCCCGGGEEECT--TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEE-----------------EEEECTTSSSE
T ss_pred ccCCCcceEEECC--CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcc-----------------eeEEcCCCCee
Confidence 0003366789964 5888888863 68999999999977665 4332110 12233443211
Q ss_pred ecccccccCccccCCCCCceeeeceeeecccccc-ccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNL-VAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEIS 264 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~ 264 (408)
+++.+.++.+..++ ........ ....... ......++ .+.+++++..++.. .++.|.++|+...
T Consensus 166 -----------~~~~~~dg~~~~v~-~~~~g~~~~~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~ 231 (361)
T 2oiz_A 166 -----------FMTICGDGGLLTIN-LGEDGKVASQSRSKQM-FSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGD 231 (361)
T ss_dssp -----------EEEEETTSSEEEEE-ECTTSSEEEEEECCCC-SCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSS
T ss_pred -----------EEEECCCCcEEEEE-ECCCCcEeeeccccce-EcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCC
Confidence 13444555555555 22100000 0000000 01111111 22345666666655 7789999998743
Q ss_pred Cce-eeEeecCCCc---ccCCcCCeEEEEEcCCCCceEEEEe----------CCCeEEEEEcCCCceecccccccccccC
Q 015363 265 NQS-FNIVDVKPAN---MEDLTEVITSAEFHPTHCNMLAYSS----------SKGSIRLIDMRQSALCDTHSKLFEEQEA 330 (408)
Q Consensus 265 ~~~-~~~~~~~~~~---~~~~~~~v~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 330 (408)
... ...+++.... ..........++|+|++..++++.. ..+.|.+||+.+++.+ ..+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v----~~i~~~-- 305 (361)
T 2oiz_A 232 EVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV----ARIPGR-- 305 (361)
T ss_dssp SCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE----EEEECT--
T ss_pred CceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEE----EEEecC--
Confidence 321 1111110000 0000111123789999834444433 1358999999998665 555554
Q ss_pred CCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCC--Cceeeeee
Q 015363 331 PGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDS--GPVATFQV 381 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~--~~~~~~~~ 381 (408)
. +.+++|+|||++|++++++.|.+||..+ + +.++++..
T Consensus 306 -----------~-p~~ia~spdg~~l~v~n~~~v~v~D~~t-~~l~~~~~i~~ 345 (361)
T 2oiz_A 306 -----------D-ALSMTIDQQRNLMLTLDGGNVNVYDISQ-PEPKLLRTIEG 345 (361)
T ss_dssp -----------T-CCEEEEETTTTEEEEECSSCEEEEECSS-SSCEEEEEETT
T ss_pred -----------C-eeEEEECCCCCEEEEeCCCeEEEEECCC-CcceeeEEecc
Confidence 3 7899999999999988669999999997 7 77777643
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.62 E-value=9.4e-13 Score=115.29 Aligned_cols=243 Identities=12% Similarity=0.076 Sum_probs=147.3
Q ss_pred eeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~ 112 (408)
.+...+.+++|+++|++++++..++.|.+||.++++.. .....+.
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~-----------------------~~~~~~~------------ 86 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK-----------------------RPFVSHK------------ 86 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-----------------------EEEECSS------------
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE-----------------------EEeeCCC------------
Confidence 34556789999999998888888999999998766421 1111222
Q ss_pred cceeEEEEeecCCCcEEEEEeCC----CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 113 EKINKIRWCQSANSALYLLSTND----KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..+.+++|. ++|.++++...+ +.|.+||..++........... ...+. .+.+.|+|...
T Consensus 87 ~~~~~i~~~--~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~-------~i~~d~~g~l~-- 149 (333)
T 2dg1_A 87 ANPAAIKIH--KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST------AYCID-------DMVFDSKGGFY-- 149 (333)
T ss_dssp SSEEEEEEC--TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS------CCCEE-------EEEECTTSCEE--
T ss_pred CCcceEEEC--CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc------CCccc-------ceEECCCCCEE--
Confidence 558999995 457777776666 6899999988776543321110 11222 67888988765
Q ss_pred ccccccCccccCCCC------CceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEe
Q 015363 189 NFGCASNDSSFPPGG------VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWN 260 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd 260 (408)
++... .+.|..++ .... .. ..+ ..+...+..++|+|+++.++.+ .++.|.+||
T Consensus 150 ----------v~~~~~~~~~~~~~l~~~~-~~~~------~~-~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d 210 (333)
T 2dg1_A 150 ----------FTDFRGYSTNPLGGVYYVS-PDFR------TV-TPI-IQNISVANGIALSTDEKVLWVTETTANRLHRIA 210 (333)
T ss_dssp ----------EEECCCBTTBCCEEEEEEC-TTSC------CE-EEE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ----------EEeccccccCCCceEEEEe-CCCC------EE-EEe-ecCCCcccceEECCCCCEEEEEeCCCCeEEEEE
Confidence 33222 24444444 1110 11 111 1222457889999999866544 688999999
Q ss_pred CCCCCceeeEeecC-CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccc
Q 015363 261 LEISNQSFNIVDVK-PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTE 339 (408)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (408)
.+..+.....+... ...+.++ ..+..++++++| +++++...++.|.+||.. ++.. ..+..+.. ..+
T Consensus 211 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~-g~~~----~~~~~~~~------~~g 277 (333)
T 2dg1_A 211 LEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNKR-GYPI----GQILIPGR------DEG 277 (333)
T ss_dssp ECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEEECTT-SCEE----EEEECTTG------GGT
T ss_pred ecCCCcCcccccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEEECCC-CCEE----EEEEcCCC------ccc
Confidence 96432222111000 0012222 357889999999 888877778999999984 4332 23322210 011
Q ss_pred ccceeEEEEEccCCCEEEEe
Q 015363 340 IIASISDIKFARNGRHILSR 359 (408)
Q Consensus 340 h~~~i~~~~~spdg~~l~s~ 359 (408)
|...+.+++|+||++.|+.+
T Consensus 278 ~~~~~~~~~~~~dg~~L~v~ 297 (333)
T 2dg1_A 278 HMLRSTHPQFIPGTNQLIIC 297 (333)
T ss_dssp CSCBCCEEEECTTSCEEEEE
T ss_pred cccCcceEEECCCCCEEEEE
Confidence 12257889999998766644
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=5.6e-14 Score=135.03 Aligned_cols=201 Identities=9% Similarity=0.004 Sum_probs=121.8
Q ss_pred cceeEEEEeecCCCcEEEEEeCC----------CeEEEEEcCC------CcEEEEe-ccCCCCcccCCCCCeEeecCCce
Q 015363 113 EKINKIRWCQSANSALYLLSTND----------KTIKLWKVQE------KKVKKVF-DWNVHPEKAAGNGPIFGSHVSAI 175 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d----------~~i~vwd~~~------~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~ 175 (408)
..+.+++|+|+ |+.|++++.| ..|++||+.+ ++...+. ... ..+.
T Consensus 130 ~~~~~~~~spD--g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~------- 191 (662)
T 3azo_A 130 LRWADPVLLPE--RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH---------RFVT------- 191 (662)
T ss_dssp EEEEEEEEETT--TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS---------SEEC-------
T ss_pred ccccCcEECCC--CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC---------Cccc-------
Confidence 56889999755 8899998876 5899999988 6554432 111 1111
Q ss_pred eeEEccCCCeeecccccccCccccCCCC--------CceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCE
Q 015363 176 PKSYMANGGCGERNFGCASNDSSFPPGG--------VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGET 247 (408)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 247 (408)
.+.|+|||+.| +..+. ...|.+|+ +.... ..... ..+...+...+..++|+|||++
T Consensus 192 ~~~~SpDG~~l------------a~~~~~~~~~~~~~~~i~~~d-~~~~g--~~~~~-~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 192 GPRLSPDGRQA------------VWLAWDHPRMPWEGTELKTAR-VTEDG--RFADT-RTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp CCEECTTSSEE------------EEEEECTTCCTTTCEEEEEEE-ECTTS--CEEEE-EEEEEETTBCEEEEEECTTSCE
T ss_pred CceECCCCCEE------------EEEECCCCCCCCCCcEEEEEE-ECCCC--ccccc-EEeCCCCCceEcceEECCCCeE
Confidence 57899999987 33222 25788888 54110 00011 2222455678999999999997
Q ss_pred EEEe-cCC--eEEEEeCCCCCceeeEeecCCCcccCCcCC--------eEEEEEcCCCCceEEEEeCCCeEEEE--EcCC
Q 015363 248 FISA-DDL--RINLWNLEISNQSFNIVDVKPANMEDLTEV--------ITSAEFHPTHCNMLAYSSSKGSIRLI--DMRQ 314 (408)
Q Consensus 248 l~~~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--------v~~~~~~p~~~~~l~s~~~dg~i~iw--d~~~ 314 (408)
++++ .++ .|.+||+. .+....+. ..+... +..++|+|++ ++++++.. +.++|| |+.+
T Consensus 256 ~~~~~~~~~~~l~~~~~~-~~~~~~l~-------~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPA-TGAATQLC-------RREEEFAGPLWTPGMRWFAPLANG-LIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp EEEECTTSSCEEEEECTT-TCCEEESS-------CCSSBSSCCCCSTTCCSEEECTTS-CEEEEEBS-SSCEEEEEETTT
T ss_pred EEEECCCCCeEEEEEECC-CCceeecc-------cccccccCccccccCceEeEeCCC-EEEEEEEc-CccEEEEEECCC
Confidence 7777 677 56666664 33333221 111111 4578999999 89999888 999999 5544
Q ss_pred CceecccccccccccCCCCccccccccceeEEEEEccCCCEE--EEeC-C--CeEEEEECCCCCCce
Q 015363 315 SALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHI--LSRD-Y--MTLKLWDINMDSGPV 376 (408)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l--~s~~-d--~~v~~wd~~~~~~~~ 376 (408)
+.. +.+..+ ...+..+ |++++..+ ++++ + ..|.+||+.+ ++..
T Consensus 326 ~~~-----~~l~~~------------~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~-g~~~ 373 (662)
T 3azo_A 326 GEL-----VDAAGP------------WTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVT-GRAR 373 (662)
T ss_dssp TEE-----EECCSS------------CCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTT-CCEE
T ss_pred CcE-----EEecCC------------CCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCC-CceE
Confidence 432 344433 2456655 14445433 3333 3 3566667765 4433
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.61 E-value=4e-13 Score=129.96 Aligned_cols=255 Identities=9% Similarity=0.083 Sum_probs=155.8
Q ss_pred eccceEEEEECCCCCeEEEeecCC-----eEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGG-----RVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
|...+..++|||||++||.++.++ .|++||+.+++.. ...+..
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~----------------------~~~~~~---------- 170 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL----------------------PDVLER---------- 170 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE----------------------EEEEEE----------
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC----------------------cccccC----------
Confidence 444688999999999999876543 8999999887531 001111
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCe----------------EEEEEcCCCcE--EEEeccCCCCcccCCCCCeEee
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKT----------------IKLWKVQEKKV--KKVFDWNVHPEKAAGNGPIFGS 170 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~----------------i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~ 170 (408)
..+..++|+|+ |+.|+.++.++. |++|++.+++. ..+.....++ ..+.
T Consensus 171 ----~~~~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~------~~~~-- 236 (710)
T 2xdw_A 171 ----VKFSCMAWTHD--GKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP------KWMG-- 236 (710)
T ss_dssp ----ECSCCEEECTT--SSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT------TCEE--
T ss_pred ----cccceEEEEeC--CCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC------eEEE--
Confidence 23678999754 889999887765 99999988753 2222222111 1122
Q ss_pred cCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeecccccc-ccccceeeccccccceEEEEeCCCCCEEE
Q 015363 171 HVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNL-VAGCRRIYAHAHDYHINSISNNSDGETFI 249 (408)
Q Consensus 171 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 249 (408)
.+.|+|||+.+...... ....+..|.+|| +....... .....+.+ ..+...+.. .|+|+|+.|+
T Consensus 237 -----~~~~SpDg~~l~~~~~~-------~~~~~~~l~~~d-~~~~~~~~~~~~~~~~l-~~~~~~~~~-~~s~dg~~l~ 301 (710)
T 2xdw_A 237 -----GAELSDDGRYVLLSIRE-------GCDPVNRLWYCD-LQQESNGITGILKWVKL-IDNFEGEYD-YVTNEGTVFT 301 (710)
T ss_dssp -----EEEECTTSCEEEEEEEC-------SSSSCCEEEEEE-GGGSSSSSCSSCCCEEE-ECSSSSCEE-EEEEETTEEE
T ss_pred -----EEEEcCCCCEEEEEEEc-------cCCCccEEEEEE-CcccccccCCccceEEe-eCCCCcEEE-EEeccCCEEE
Confidence 57899999987221100 011156788888 43210000 00012222 334344444 4788888776
Q ss_pred Ee-c----CCeEEEEeCCCCCc-eeeEeecCCCcccCCc--CCeEEEEEcCCCCceEEEEeCCCe--EEEEEcCCCceec
Q 015363 250 SA-D----DLRINLWNLEISNQ-SFNIVDVKPANMEDLT--EVITSAEFHPTHCNMLAYSSSKGS--IRLIDMRQSALCD 319 (408)
Q Consensus 250 ~~-~----d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~ 319 (408)
.. . ...|.+||+..... ..+. +..|. ..+..++|++++ .++++...|+. |.+||+.+++..
T Consensus 302 ~~s~~~~~~~~l~~~d~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~~~~g~~~- 372 (710)
T 2xdw_A 302 FKTNRHSPNYRLINIDFTDPEESKWKV-------LVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHDLATGALL- 372 (710)
T ss_dssp EEECTTCTTCEEEEEETTSCCGGGCEE-------EECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTTCCEE-
T ss_pred EEECCCCCCCEEEEEeCCCCCccccee-------ccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEECCCCCEE-
Confidence 54 2 34799999985432 1121 12232 357789999777 88888888885 566677566432
Q ss_pred ccccccccccCCCCccccccccceeEEEEEccCCCEEEEe--C---CCeEEEEECCCCCC
Q 015363 320 THSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR--D---YMTLKLWDINMDSG 374 (408)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~--~---d~~v~~wd~~~~~~ 374 (408)
..+..+ .+.+..+.++|++..|+.. + .++|++||+.+ ++
T Consensus 373 ---~~l~~~------------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t-g~ 416 (710)
T 2xdw_A 373 ---KIFPLE------------VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK-EE 416 (710)
T ss_dssp ---EEECCC------------SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS-SS
T ss_pred ---EecCCC------------CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC-Cc
Confidence 333333 2578889999998766532 2 28999999986 44
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=1.4e-13 Score=132.81 Aligned_cols=250 Identities=6% Similarity=-0.031 Sum_probs=151.7
Q ss_pred eccceEEEEECCCCCeEE-----EeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 34 EVDIISAIEFDKSGDHLA-----TGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~-----sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
|...+.+++|||||++|| .|+.+..|++||+.+++.. . ..+...
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~-----------------------~--~~~~~~------ 167 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS-----------------------K--VDVIEG------ 167 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC-----------------------S--SCCBSC------
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc-----------------------C--CcccCc------
Confidence 455799999999999998 4555678999999887531 0 011100
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCe-------------EEEEEcCCCcE--EEEeccCCCCcccCCCCCeEeecCC
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKT-------------IKLWKVQEKKV--KKVFDWNVHPEKAAGNGPIFGSHVS 173 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~-------------i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~ 173 (408)
.....++|+| ||+.|+.++.|.. |++|++.++.. ..+.....+ ...+.
T Consensus 168 ----~~~~~~~wsp--Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~------~~~~~----- 230 (695)
T 2bkl_A 168 ----GKYATPKWTP--DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD------PTTFL----- 230 (695)
T ss_dssp ----CTTCCCEECT--TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC------TTCEE-----
T ss_pred ----ccccceEEec--CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC------CEEEE-----
Confidence 1126789965 4889999988776 99999988762 233332211 11222
Q ss_pred ceeeEEccCCCeeecccccccCccccCCCCC--c--eeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEE
Q 015363 174 AIPKSYMANGGCGERNFGCASNDSSFPPGGV--S--SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFI 249 (408)
Q Consensus 174 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 249 (408)
.+.|+|+|+.+ +..+.+ + .|.+++ . . .. ..+.+ ..+...+....+ +++.+++
T Consensus 231 --~~~~SpDG~~l------------~~~~~~~~~~~~l~~~~-~---~---~~-~~~~l-~~~~~~~~~~~~-~~g~l~~ 286 (695)
T 2bkl_A 231 --QSDLSRDGKYL------------FVYILRGWSENDVYWKR-P---G---EK-DFRLL-VKGVGAKYEVHA-WKDRFYV 286 (695)
T ss_dssp --EEEECTTSCCE------------EEEEEETTTEEEEEEEC-T---T---CS-SCEEE-EECSSCCEEEEE-ETTEEEE
T ss_pred --EEEECCCCCEE------------EEEEeCCCCceEEEEEc-C---C---CC-ceEEe-ecCCCceEEEEe-cCCcEEE
Confidence 67899999987 333322 2 444433 1 1 11 11222 333344555556 5555444
Q ss_pred Eec----CCeEEEEeCCCCCc--eeeEeecCCCcccCC-cCCeEEEEEcCCCCceEEEEeCCCeEEEEEcC-CCceeccc
Q 015363 250 SAD----DLRINLWNLEISNQ--SFNIVDVKPANMEDL-TEVITSAEFHPTHCNMLAYSSSKGSIRLIDMR-QSALCDTH 321 (408)
Q Consensus 250 ~~~----d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~ 321 (408)
.++ ++.|.+||+.+... ...+ +..+ ...+..++|+ ++ .++++...|+..+||.+. .++..
T Consensus 287 ~s~~~~~~~~l~~~d~~~~~~~~~~~l-------~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~~~--- 354 (695)
T 2bkl_A 287 LTDEGAPRQRVFEVDPAKPARASWKEI-------VPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLKGKPV--- 354 (695)
T ss_dssp EECTTCTTCEEEEEBTTBCSGGGCEEE-------ECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCCEE---
T ss_pred EECCCCCCCEEEEEeCCCCCccCCeEE-------ecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCCee---
Confidence 442 58999999975432 1222 2222 4457788888 55 788999999988888665 23222
Q ss_pred ccccccccCCCCccccccccceeEEEEEccCCCEEEEe----C-CCeEEEEECCCCCCceeeeee
Q 015363 322 SKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR----D-YMTLKLWDINMDSGPVATFQV 381 (408)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~----~-d~~v~~wd~~~~~~~~~~~~~ 381 (408)
+.+..+. .+.|..++++|++..|+.. . .++|++||+.+ ++ ...+..
T Consensus 355 -~~l~~~~-----------~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~-g~-~~~l~~ 405 (695)
T 2bkl_A 355 -RTVQLPG-----------VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST-GK-SELWAK 405 (695)
T ss_dssp -EECCCSS-----------SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT-CC-EEEEEE
T ss_pred -EEecCCC-----------CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC-Cc-EEEEec
Confidence 2232221 2567788899999876632 2 28999999986 34 344443
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=5.5e-14 Score=126.17 Aligned_cols=261 Identities=7% Similarity=-0.040 Sum_probs=137.3
Q ss_pred EEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEE
Q 015363 40 AIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIR 119 (408)
Q Consensus 40 ~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~ 119 (408)
.+.|+|||++|+.++.++.|.+|++.+++.. .+..... .+.|..+.+.. ...... .......+.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~-----~~~~~~~--~~~~~g~~l~~-~~~~~~--------~~~~~~~~~ 148 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQ-----VIYTVDE--EWKGYGTWVAN-SDCTKL--------VGIEILKRD 148 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEE-----EEEECCT--TEEEEEEEEEC-TTSSEE--------EEEEEEGGG
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcE-----EEEeccc--ccCCCCCEEEe-ccCCcc--------ccccccccc
Confidence 4789999999999999999999998876421 0000000 00000000000 000000 000000134
Q ss_pred EeecCCCcEEEEE-----eCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCeeecccccc
Q 015363 120 WCQSANSALYLLS-----TNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGCGERNFGCA 193 (408)
Q Consensus 120 ~~p~~~~~~l~~~-----~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~~~~~~~ 193 (408)
|+| +++.++.+ ..+..|.+||+.+++...+..... .+. .+.|+| +++.+..
T Consensus 149 ~sp--dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~---------~~~-------~~~~sp~dg~~l~~----- 205 (396)
T 3c5m_A 149 WQP--LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTA---------WLG-------HPIYRPFDDSTVGF----- 205 (396)
T ss_dssp CCC--CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESS---------CEE-------EEEEETTEEEEEEE-----
T ss_pred cCC--CCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCc---------ccc-------cceECCCCCCEEEE-----
Confidence 544 35555544 466789999999887665543211 122 578899 7775511
Q ss_pred cCccccCCCCC----ceeeeceeeeccccccccccceeecccc-ccceEEEEeCCCCCEEEEe-cC-----CeEEEEeCC
Q 015363 194 SNDSSFPPGGV----SSLRLPVVVTSQETNLVAGCRRIYAHAH-DYHINSISNNSDGETFISA-DD-----LRINLWNLE 262 (408)
Q Consensus 194 ~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~~~~~~~l~~~-~d-----~~i~iwd~~ 262 (408)
.+.... ..|.+|+ +... ..+.+.... ...+..++|+|+|+.|+.+ .+ +.|++||+.
T Consensus 206 -----~~~~~~~~~~~~l~~~d-~~~~-------~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 206 -----CHEGPHDLVDARMWLVN-EDGS-------NVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp -----EECSCSSSCSCCCEEEE-TTSC-------CCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred -----EecCCCCCCCceEEEEE-CCCC-------ceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 111111 3566655 3221 111111211 2357889999999977665 32 449999998
Q ss_pred CCCceeeEeecCCCcccCCcCCeEEEEEcC-CCCceEEEEe----------------CCCeEEEEEcCCCceeccccccc
Q 015363 263 ISNQSFNIVDVKPANMEDLTEVITSAEFHP-THCNMLAYSS----------------SKGSIRLIDMRQSALCDTHSKLF 325 (408)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~----------------~dg~i~iwd~~~~~~~~~~~~~~ 325 (408)
++ ....+.. ... .. +.|+| +| +++++++ .+..|++||+.+++. ..+
T Consensus 273 ~g-~~~~l~~-----~~~----~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l 335 (396)
T 3c5m_A 273 TL-ENEEVMV-----MPP----CS-HLMSNFDG-SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-----QKL 335 (396)
T ss_dssp TC-CEEEEEE-----CCS----EE-EEEECSSS-SEEEEEECCC----------CCCCCCEEEEEETTTTBC-----CEE
T ss_pred CC-CeEEeee-----CCC----CC-CCccCCCC-ceEEEecCCcceeeccccccccCCCCcEEEEecccCce-----EEc
Confidence 44 3322211 111 23 89999 99 7777654 347899999987753 233
Q ss_pred ccccCCCCccccccccceeEEEEEccCCCEEEEeC--CCeEEEEECC
Q 015363 326 EEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD--YMTLKLWDIN 370 (408)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--d~~v~~wd~~ 370 (408)
..+.... ..+...-...+..++|+|||+.|+.++ ++...+|.++
T Consensus 336 ~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 336 CKHSTSW-DVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EECCCCC-CCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cCCCCcc-ccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 3331000 000000000245678999999888763 3555555544
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.56 E-value=8.2e-13 Score=116.34 Aligned_cols=231 Identities=9% Similarity=0.124 Sum_probs=140.7
Q ss_pred cceEEEEECCCCCeEEEeecC---Ce--EEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccc
Q 015363 36 DIISAIEFDKSGDHLATGDRG---GR--VVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLE 110 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~d---g~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~ 110 (408)
..+.+++|||||++||.++.+ +. |.+|++.+++. ..+..+.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~------------------------~~l~~~~---------- 104 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS------------------------KKILEAK---------- 104 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE------------------------EEEEEES----------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce------------------------EEEEcCC----------
Confidence 568899999999999988754 34 66677665532 1122222
Q ss_pred cccceeEEEEeecCCCcEEEEEeCC---------------------------CeEEEEEcCCCcEEEEeccCCCCcccCC
Q 015363 111 IEEKINKIRWCQSANSALYLLSTND---------------------------KTIKLWKVQEKKVKKVFDWNVHPEKAAG 163 (408)
Q Consensus 111 ~~~~v~~v~~~p~~~~~~l~~~~~d---------------------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 163 (408)
. +..++|+|+ |+.|+.++.+ ..|.+||+.+++....+... .
T Consensus 105 --~-~~~~~wspd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~------ 172 (347)
T 2gop_A 105 --N-IRSLEWNED--SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-R------ 172 (347)
T ss_dssp --E-EEEEEECTT--SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-T------
T ss_pred --C-ccceeECCC--CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-C------
Confidence 4 888999654 8888887642 57899999988762222211 1
Q ss_pred CCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCC------c-eeeeceeeeccccccccccceeeccccccce
Q 015363 164 NGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGV------S-SLRLPVVVTSQETNLVAGCRRIYAHAHDYHI 236 (408)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 236 (408)
+ ..+.|+|+| .+ +++..+ . ...+|. +. . ... +.+ ..+ ..+
T Consensus 173 ---~-------~~~~~spdg-~~------------~~~~~~~~~~~~~~~~~l~~-~d--~----~~~-~~l-~~~-~~~ 219 (347)
T 2gop_A 173 ---F-------SSGIWHRDK-IV------------VNVPHREIIPQYFKFWDIYI-WE--D----GKE-EKM-FEK-VSF 219 (347)
T ss_dssp ---T-------CEEEEETTE-EE------------EEEECCCSSCCSSCCEEEEE-EE--T----TEE-EEE-EEE-ESE
T ss_pred ---c-------ccccCCCCe-EE------------EEEecccccccccccccEEE-eC--C----Cce-EEe-ccC-cce
Confidence 1 157899999 54 433222 1 445665 33 1 111 121 222 444
Q ss_pred EEEEeCCCCCEEEEe-cC--------CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEE-EEEcCCCCceEEEEeCCCe
Q 015363 237 NSISNNSDGETFISA-DD--------LRINLWNLEISNQSFNIVDVKPANMEDLTEVITS-AEFHPTHCNMLAYSSSKGS 306 (408)
Q Consensus 237 ~~i~~~~~~~~l~~~-~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~s~~~dg~ 306 (408)
..+ +|+|+.|+.+ .+ ..|.+|| . +....+ ...+...+.. +.|+ ++ ++++++.++.
T Consensus 220 ~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~--~~~~~l-------~~~~~~~~~~~~~~s-dg--~~~~~~~~~~ 284 (347)
T 2gop_A 220 YAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-G--KEVMGI-------LDEVDRGVGQAKIKD-GK--VYFTLFEEGS 284 (347)
T ss_dssp EEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-S--SCEEES-------STTCCSEEEEEEEET-TE--EEEEEEETTE
T ss_pred eeE--CCCCCEEEEEEccccCCccccceEEEEC-C--CceEec-------cccCCcccCCccEEc-Cc--EEEEEecCCc
Confidence 444 8999988765 32 3677787 2 333222 3445667776 8999 76 8888889999
Q ss_pred EEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe-CCCeE-EEEECCCCCCceeeeeecc
Q 015363 307 IRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-DYMTL-KLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 307 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~d~~v-~~wd~~~~~~~~~~~~~~~ 383 (408)
++|| +.+++. ..+..+ ...|.+++|+| .+++++ +++.. .+|.++ ++ ...+..|.
T Consensus 285 ~~l~-~~~g~~-----~~~~~~------------~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~--g~-~~~lt~~n 340 (347)
T 2gop_A 285 VNLY-IWDGEI-----KPIAKG------------RHWIMGFDVDE--IVVYLKETATRLRELFTWD--GE-EKQLTDYN 340 (347)
T ss_dssp EEEE-EESSSE-----EEEECS------------SSEEEEEEESS--SEEEEEECSSSCCEEEEES--SS-EEECCCTT
T ss_pred EEEE-EcCCce-----EEEecC------------CCeEEeeeeeC--cEEEEEcCCCChHHheEeC--Cc-EEEecccc
Confidence 9999 875432 122222 25789999999 566665 45433 677665 33 44455544
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.56 E-value=2.4e-12 Score=109.03 Aligned_cols=237 Identities=7% Similarity=-0.009 Sum_probs=151.0
Q ss_pred ceEEEEECCCCCeEE-EeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 37 IISAIEFDKSGDHLA-TGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 37 ~V~~~~~s~~~~~l~-sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
...+++++++|++++ +...++.|.+|+..+.... .....+. ..+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~-----------------------~~~~~~~------------~~p 69 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-----------------------VLPFNGL------------YQP 69 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E-----------------------ECCCCSC------------CSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc-----------------------eEeeCCc------------CCc
Confidence 678999999999777 5567889999986544310 0001111 347
Q ss_pred eEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccC
Q 015363 116 NKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASN 195 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 195 (408)
.++++. ++|.++++.. ++.|.+||..+.......... . ..+..+++.++|...
T Consensus 70 ~~i~~~--~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~--------~-------~~p~~i~~~~~g~l~--------- 122 (270)
T 1rwi_B 70 QGLAVD--GAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDG--------L-------NYPEGLAVDTQGAVY--------- 122 (270)
T ss_dssp CCEEEC--TTCCEEEEET-TTEEEEECTTCSCCEECCCCS--------C-------SSEEEEEECTTCCEE---------
T ss_pred ceeEEC--CCCCEEEEcC-CCEEEEEeCCCceEeeeecCC--------c-------CCCcceEECCCCCEE---------
Confidence 789995 4577665555 889999998776543221110 0 112267888888754
Q ss_pred ccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecC
Q 015363 196 DSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVK 274 (408)
Q Consensus 196 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~ 274 (408)
++...++.|..|+ ...... ..........+.+++++++++++++. .++.|.+||..... ....
T Consensus 123 ---v~~~~~~~i~~~~-~~~~~~-------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~-~~~~---- 186 (270)
T 1rwi_B 123 ---VADRGNNRVVKLA-AGSKTQ-------TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN-QVVL---- 186 (270)
T ss_dssp ---EEEGGGTEEEEEC-TTCCSC-------EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC-EEEC----
T ss_pred ---EEECCCCEEEEEE-CCCcee-------EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc-eEee----
Confidence 5545566777765 211100 00011222457789999999977777 78899999987433 2211
Q ss_pred CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 275 PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 275 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
...+...+..++++++| .++++...++.|.+||....... ..... +...+.+++++|+|+
T Consensus 187 ---~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~-----~~~~~-----------~~~~p~~i~~~~~g~ 246 (270)
T 1rwi_B 187 ---PFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTST-----VLPFT-----------GLNTPLAVAVDSDRT 246 (270)
T ss_dssp ---CCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCCE-----ECCCC-----------SCSCEEEEEECTTCC
T ss_pred ---cccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcce-----eeccC-----------CCCCceeEEECCCCC
Confidence 11223567899999999 88888777899999998765321 11100 114588999999999
Q ss_pred EEEEeC-CCeEEEEECCC
Q 015363 355 HILSRD-YMTLKLWDINM 371 (408)
Q Consensus 355 ~l~s~~-d~~v~~wd~~~ 371 (408)
++++.. ++.|+++++..
T Consensus 247 l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 247 VYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEEEEGGGTEEEEECCCG
T ss_pred EEEEECCCCEEEEEcCCC
Confidence 777764 69999999975
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=2.2e-12 Score=112.94 Aligned_cols=253 Identities=9% Similarity=0.072 Sum_probs=158.8
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
..|.+++|++++..++..+.++.++.|.-. ....+..+. ..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~------------~~~ 47 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE--------------------------PWLEISKKG------------LQL 47 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE--------------------------EEEEEESSC------------CCE
T ss_pred cccceeeecCCccceeEEeecccCcccccc--------------------------eeEEEeccC------------ccc
Confidence 347788899988777777778888888311 122344444 457
Q ss_pred eEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccC
Q 015363 116 NKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASN 195 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 195 (408)
.+++|. ++|.+++++..++.|.+||..+++........ ...+. .++++++|+.+
T Consensus 48 ~~~~~~--~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--------~~~~~-------~i~~~~dg~l~--------- 101 (333)
T 2dg1_A 48 EGLNFD--RQGQLFLLDVFEGNIFKINPETKEIKRPFVSH--------KANPA-------AIKIHKDGRLF--------- 101 (333)
T ss_dssp EEEEEC--TTSCEEEEETTTCEEEEECTTTCCEEEEEECS--------SSSEE-------EEEECTTSCEE---------
T ss_pred cCcEEC--CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC--------CCCcc-------eEEECCCCcEE---------
Confidence 899995 55877778888999999999988766543221 11233 68899999865
Q ss_pred ccccCCCCC----ceeeeceeeeccccccccccceeec-cccccceEEEEeCCCCCEEEEe-c------CCeEEEEeCCC
Q 015363 196 DSSFPPGGV----SSLRLPVVVTSQETNLVAGCRRIYA-HAHDYHINSISNNSDGETFISA-D------DLRINLWNLEI 263 (408)
Q Consensus 196 ~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~~~-~------d~~i~iwd~~~ 263 (408)
++...+ +.|.+|+ ....... ..+. ..+...+..++++|+++++++. . .+.|..+|..
T Consensus 102 ---v~~~~~~~~~~~i~~~d-~~~~~~~------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~- 170 (333)
T 2dg1_A 102 ---VCYLGDFKSTGGIFAAT-ENGDNLQ------DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD- 170 (333)
T ss_dssp ---EEECTTSSSCCEEEEEC-TTSCSCE------EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT-
T ss_pred ---EEeCCCCCCCceEEEEe-CCCCEEE------EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC-
Confidence 444444 5788777 3322111 0110 1234568999999999988876 3 2556666655
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCc-eEEEEeCCCeEEEEEcCC-CceecccccccccccCCCCcccccccc
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN-MLAYSSSKGSIRLIDMRQ-SALCDTHSKLFEEQEAPGTRSFFTEII 341 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~ 341 (408)
.+....+ ......+..++|+|++ + ++++.+.++.|.+||+.+ +... ..+.... ...+.++
T Consensus 171 ~~~~~~~--------~~~~~~~~~i~~~~dg-~~l~v~~~~~~~i~~~d~~~~g~~~----~~~~~~~----~~~~~~~- 232 (333)
T 2dg1_A 171 FRTVTPI--------IQNISVANGIALSTDE-KVLWVTETTANRLHRIALEDDGVTI----QPFGATI----PYYFTGH- 232 (333)
T ss_dssp SCCEEEE--------EEEESSEEEEEECTTS-SEEEEEEGGGTEEEEEEECTTSSSE----EEEEEEE----EEECCSS-
T ss_pred CCEEEEe--------ecCCCcccceEECCCC-CEEEEEeCCCCeEEEEEecCCCcCc----ccccceE----EEecCCC-
Confidence 2222221 1123447889999999 6 445555688999999964 3221 1110000 0000111
Q ss_pred ceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecc
Q 015363 342 ASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 342 ~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
..+..++++++|+++++.. ++.|.+||.+ ++.+..+..+.
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~--g~~~~~~~~~~ 273 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR--GYPIGQILIPG 273 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTT--SCEEEEEECTT
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCC--CCEEEEEEcCC
Confidence 3578899999999877764 5899999983 57777776553
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=2.1e-11 Score=104.13 Aligned_cols=235 Identities=8% Similarity=0.103 Sum_probs=147.1
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEE-ccCCCeeecccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSY-MANGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~l~~~~~ 191 (408)
..+.++++. +++.++++...++.|.+||.. ++....+...... .+. ...+..+++ .+++..+
T Consensus 30 ~~p~~v~~~--~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~-----~~~----~~~p~~i~~~~~~g~l~----- 92 (286)
T 1q7f_A 30 TEPSGVAVN--AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKR-----DSQ----LLYPNRVAVVRNSGDII----- 92 (286)
T ss_dssp SCEEEEEEC--TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSS-----TTC----BSSEEEEEEETTTTEEE-----
T ss_pred CCCceEEEC--CCCCEEEEECCCCEEEEECCC-CcEEEEecccCCC-----ccc----ccCceEEEEEcCCCeEE-----
Confidence 458889995 457788888889999999987 4444433221100 000 011225677 4666554
Q ss_pred cccCccccCCC-CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 192 CASNDSSFPPG-GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 192 ~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
++.. .++.|.+|+ .. ......+...+...+.+++++|+++++++. .++.|.+||.. +. ...
T Consensus 93 -------v~~~~~~~~i~~~d-~~-------g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~ 155 (286)
T 1q7f_A 93 -------VTERSPTHQIQIYN-QY-------GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GN-VLH 155 (286)
T ss_dssp -------EEECGGGCEEEEEC-TT-------SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEE
T ss_pred -------EEcCCCCCEEEEEC-CC-------CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CC-EEE
Confidence 4432 267888877 22 122222222334568899999999988887 78999999975 33 333
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
.+. ...+...+..++++|++ +++++...++.|++||.... .+ ..+..+ ++...+..+++
T Consensus 156 ~~~-----~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~-~~----~~~~~~----------g~~~~p~~i~~ 214 (286)
T 1q7f_A 156 KFG-----CSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYEGQ-YL----RQIGGE----------GITNYPIGVGI 214 (286)
T ss_dssp EEE-----CTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETTCC-EE----EEESCT----------TTSCSEEEEEE
T ss_pred EeC-----CCCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCCCC-EE----EEEccC----------CccCCCcEEEE
Confidence 221 12344568999999999 88888788999999997543 22 223221 11245789999
Q ss_pred ccCCCEEEEeC-CC-eEEEEECCCCCCceeeeeeccccc--ceEEecCCCeeeeeecee
Q 015363 350 ARNGRHILSRD-YM-TLKLWDINMDSGPVATFQVHEHLR--PKVMHSSKNYFMGLDNIH 404 (408)
Q Consensus 350 spdg~~l~s~~-d~-~v~~wd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~ 404 (408)
+|+|+++++.. ++ .|.+||.+ ++.+..+..+.... ..+..--++.++..+..+
T Consensus 215 d~~G~l~v~~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~ 271 (286)
T 1q7f_A 215 NSNGEILIADNHNNFNLTIFTQD--GQLISALESKVKHAQCFDVALMDDGSVVLASKDY 271 (286)
T ss_dssp CTTCCEEEEECSSSCEEEEECTT--SCEEEEEEESSCCSCEEEEEEETTTEEEEEETTT
T ss_pred CCCCCEEEEeCCCCEEEEEECCC--CCEEEEEcccCCCCcceeEEECCCCcEEEECCCC
Confidence 99999888875 54 99999963 67788887654432 123322344555444433
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.51 E-value=7.2e-12 Score=106.14 Aligned_cols=199 Identities=10% Similarity=0.039 Sum_probs=137.3
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCC
Q 015363 125 NSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGV 204 (408)
Q Consensus 125 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 204 (408)
++++|++++.|+.|.+||.++++.+..+..+... .+ ..+.+.|+|+.+ + +.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~-------~~-------~~~~~~pdG~il------------v--s~~ 55 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGW-------EC-------NSVAATKAGEIL------------F--SYS 55 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTC-------CC-------CEEEECTTSCEE------------E--ECB
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccC-------CC-------cCeEECCCCCEE------------E--eCC
Confidence 4578999999999999999999988877664310 01 157888999876 4 345
Q ss_pred ceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-c-CCeEEEEeCCCCCceeeEeecCCCcccCCc
Q 015363 205 SSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-D-DLRINLWNLEISNQSFNIVDVKPANMEDLT 282 (408)
Q Consensus 205 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 282 (408)
+.|..|| . .++.+..+.......+.++.+.++|+++++. . ++.|..+|.. + +.+..+.+.. ....+.
T Consensus 56 ~~V~~~d-~-------~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-G-k~l~~~~~~~-~~~~~~ 124 (276)
T 3no2_A 56 KGAKMIT-R-------DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-G-EVLSKTEFET-GIERPH 124 (276)
T ss_dssp SEEEEEC-T-------TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-S-CEEEEEEECC-SCSSGG
T ss_pred CCEEEEC-C-------CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-C-CEEEEEeccC-CCCccc
Confidence 6677776 2 1222333312223468889999999999987 5 7788878764 4 3333333221 111222
Q ss_pred CCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCC-
Q 015363 283 EVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDY- 361 (408)
Q Consensus 283 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d- 361 (408)
.....+++.++| +++++...++.|..||.. ++.+ ..+... ..+..+.+.++|..|+++.+
T Consensus 125 ~~~~~v~~~~~G-~~lv~~~~~~~v~~~d~~-G~~~----w~~~~~-------------~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 125 AQFRQINKNKKG-NYLVPLFATSEVREIAPN-GQLL----NSVKLS-------------GTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp GSCSCCEECTTS-CEEEEETTTTEEEEECTT-SCEE----EEEECS-------------SCCCEEEECTTSCEEEECBTT
T ss_pred ccccCceECCCC-CEEEEecCCCEEEEECCC-CCEE----EEEECC-------------CCccceeEcCCCCEEEEeCCC
Confidence 344567889999 899999999999999998 7654 344332 23455777899999998865
Q ss_pred CeEEEEECCCCCCceeeeeec
Q 015363 362 MTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 362 ~~v~~wd~~~~~~~~~~~~~~ 382 (408)
+.|..+|..+ |+.+..+..+
T Consensus 186 ~~v~~~d~~t-G~~~w~~~~~ 205 (276)
T 3no2_A 186 HCFVQLNLES-NRIVRRVNAN 205 (276)
T ss_dssp SEEEEECTTT-CCEEEEEEGG
T ss_pred CeEEEEeCcC-CcEEEEecCC
Confidence 7899999987 7888888754
No 183
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.51 E-value=2.1e-11 Score=105.67 Aligned_cols=247 Identities=8% Similarity=0.052 Sum_probs=149.8
Q ss_pred cceEEEEECCCCCeEEE-------eecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeee--eccCCcccccc
Q 015363 36 DIISAIEFDKSGDHLAT-------GDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTE--FQSHEPEFDYL 106 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~s-------g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~h~~~~~~~ 106 (408)
....+++|+++|.++++ +..++.|.+|+..+++.. .... ..++.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~---------------------~~~~~~~~~~~------ 70 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT---------------------VICKPEVNGYG------ 70 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE---------------------EEECCEETTEE------
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE---------------------EEEecccCCCC------
Confidence 35679999999998888 678899999997665421 0000 01122
Q ss_pred cccccccceeEEEEeecCC-CcEEEEEeCCCeEEEEEcCCCcEEEE-eccCCCCcccCCCCCeEeecCCceeeEEccCCC
Q 015363 107 KSLEIEEKINKIRWCQSAN-SALYLLSTNDKTIKLWKVQEKKVKKV-FDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG 184 (408)
Q Consensus 107 ~~~~~~~~v~~v~~~p~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 184 (408)
..+.++++. ++ |. +..++..+.|.+||.. ++.... ....... +. ..+..+++.++|.
T Consensus 71 ------~~~~~i~~~--~~~g~-l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~----~~-------~~~~~i~~d~~g~ 129 (314)
T 1pjx_A 71 ------GIPAGCQCD--RDANQ-LFVADMRLGLLVVQTD-GTFEEIAKKDSEGR----RM-------QGCNDCAFDYEGN 129 (314)
T ss_dssp ------CCEEEEEEC--SSSSE-EEEEETTTEEEEEETT-SCEEECCSBCTTSC----BC-------BCCCEEEECTTSC
T ss_pred ------CCCceEEEe--cCCCc-EEEEECCCCEEEEeCC-CCEEEEEeccCCCc----cc-------cCCcCEEECCCCC
Confidence 458889984 55 54 4444445579999998 765443 2211000 00 1122678888887
Q ss_pred eeecccccccCccccCCCCC---------------ceeeeceeeeccccccccccceeeccccccceEEEEeC----CCC
Q 015363 185 CGERNFGCASNDSSFPPGGV---------------SSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNN----SDG 245 (408)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~----~~~ 245 (408)
.. ++...+ +.|..++ .. ...... ..+......++++ |++
T Consensus 130 l~------------v~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-------g~~~~~--~~~~~~~~~i~~~~~~d~dg 187 (314)
T 1pjx_A 130 LW------------ITAPAGEVAPADYTRSMQEKFGSIYCFT-TD-------GQMIQV--DTAFQFPNGIAVRHMNDGRP 187 (314)
T ss_dssp EE------------EEECBCBCTTSCCCBTTSSSCEEEEEEC-TT-------SCEEEE--EEEESSEEEEEEEECTTSCE
T ss_pred EE------------EEecCcccccccccccccCCCCeEEEEC-CC-------CCEEEe--ccCCCCcceEEEecccCCCC
Confidence 64 332222 4455444 11 111111 1222346788999 999
Q ss_pred CEEEEe--cCCeEEEEeCCCCCcee--eEeecCCCcccCCc-CCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecc
Q 015363 246 ETFISA--DDLRINLWNLEISNQSF--NIVDVKPANMEDLT-EVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDT 320 (408)
Q Consensus 246 ~~l~~~--~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 320 (408)
+.+..+ .++.|.+||....+... ..+. .+..+. ..+..++++++| +++++...++.|.+||..+++..
T Consensus 188 ~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~----~~~~~~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g~~~-- 260 (314)
T 1pjx_A 188 YQLIVAETPTKKLWSYDIKGPAKIENKKVWG----HIPGTHEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGGQPK-- 260 (314)
T ss_dssp EEEEEEETTTTEEEEEEEEETTEEEEEEEEE----ECCCCSSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCBSCS--
T ss_pred CEEEEEECCCCeEEEEECCCCCccccceEEE----ECCCCCCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCCcEe--
Confidence 765544 68999999986222211 1110 123333 557889999999 88888778899999998866432
Q ss_pred cccccccccCCCCccccccccceeEEEEEccCCCEEEEe-C-CCeEEEEECCCCC
Q 015363 321 HSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-D-YMTLKLWDINMDS 373 (408)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~-d~~v~~wd~~~~~ 373 (408)
..+..+ ...+.+++|+|+|+.|+.+ . ++.|..|++...+
T Consensus 261 --~~~~~~------------~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 261 --MRIRCP------------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp --EEEECS------------SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred --EEEeCC------------CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 223222 2468999999999966554 3 4799999987643
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.51 E-value=2.5e-10 Score=97.99 Aligned_cols=239 Identities=8% Similarity=-0.018 Sum_probs=155.3
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
+...+.+++++++|+++++...++.|.+|+.. +... . .....+. .
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~---------------------~-~~~~~~~------------~ 57 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT---------------------E-YPLPTPD------------A 57 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE---------------------E-EECSSTT------------C
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE---------------------E-ecCCccc------------C
Confidence 34678999999999977776667899999976 3210 0 0011112 4
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
.+.++++. ++|.++++...++.|..|+.. ++.... ..... ...+ ..+++.++|...
T Consensus 58 ~~~~i~~~--~~g~l~v~~~~~~~i~~~~~~-g~~~~~-~~~~~------~~~~-------~~i~~~~~g~l~------- 113 (299)
T 2z2n_A 58 KVMCLTIS--SDGEVWFTENAANKIGRITKK-GIIKEY-TLPNP------DSAP-------YGITEGPNGDIW------- 113 (299)
T ss_dssp CEEEEEEC--TTSCEEEEETTTTEEEEECTT-SCEEEE-ECSST------TCCE-------EEEEECTTSCEE-------
T ss_pred ceeeEEEC--CCCCEEEeCCCCCeEEEECCC-CcEEEE-eCCCc------CCCc-------eeeEECCCCCEE-------
Confidence 58889985 558777776778899999986 433222 21100 1112 267788888765
Q ss_pred cCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEee
Q 015363 194 SNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVD 272 (408)
Q Consensus 194 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~ 272 (408)
++...++.|..|+ . ... ............+..++++++++++++. .++.|..||.. .. .... .
T Consensus 114 -----v~~~~~~~i~~~d-~-~g~------~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~-~ 177 (299)
T 2z2n_A 114 -----FTEMNGNRIGRIT-D-DGK------IREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITES-GD-ITEF-K 177 (299)
T ss_dssp -----EEETTTTEEEEEC-T-TCC------EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEE-E
T ss_pred -----EEecCCceEEEEC-C-CCC------EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCC-Cc-EEEe-e
Confidence 5555567788777 3 111 1111112234568899999999888887 68899999983 33 2221 1
Q ss_pred cCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccC
Q 015363 273 VKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARN 352 (408)
Q Consensus 273 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spd 352 (408)
.......+..+++++++ .++++...++.|.+||. ++... .+... .+...+.+++++++
T Consensus 178 -----~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~-----~~~~~----------~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 178 -----IPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-SGEIT-----EFKIP----------TPNARPHAITAGAG 235 (299)
T ss_dssp -----CSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEE-----EEECS----------STTCCEEEEEECST
T ss_pred -----CCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-CCcEE-----EEECC----------CCCCCceeEEECCC
Confidence 22334567899999999 77777666889999998 65432 11111 11246889999999
Q ss_pred CCEEEEe-CCCeEEEEEC
Q 015363 353 GRHILSR-DYMTLKLWDI 369 (408)
Q Consensus 353 g~~l~s~-~d~~v~~wd~ 369 (408)
|++.++. .++.|..||.
T Consensus 236 g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TCEEEEETTTTEEEEEET
T ss_pred CCEEEeccCCceEEEECC
Confidence 9977776 4589999998
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=3.5e-11 Score=104.89 Aligned_cols=251 Identities=7% Similarity=-0.002 Sum_probs=154.3
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
+....+.+. +++++++...++.|.+||..+++. +..+.. . ...
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~-----------------------~~~i~~-~------------~~p 86 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE-----------------------VGRITG-F------------TSP 86 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE-----------------------EEEEEC-C------------SSE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE-----------------------EEEcCC-C------------CCC
Confidence 345667774 355566666789999999887753 223321 1 347
Q ss_pred eEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccC
Q 015363 116 NKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASN 195 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 195 (408)
..++++|+ +.++++...++.|.+||..+++.............. ..+..+++ .+++..
T Consensus 87 ~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~----------~~p~~i~~-~~~~ly--------- 144 (328)
T 3dsm_A 87 RYIHFLSD--EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMES----------GSTEQMVQ-YGKYVY--------- 144 (328)
T ss_dssp EEEEEEET--TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTT----------CBCCCEEE-ETTEEE---------
T ss_pred cEEEEeCC--CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccC----------CCcceEEE-ECCEEE---------
Confidence 88999765 644444448999999999999877655543200000 00113444 333322
Q ss_pred ccccCCC-CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cC----------CeEEEEeCCC
Q 015363 196 DSSFPPG-GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DD----------LRINLWNLEI 263 (408)
Q Consensus 196 ~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d----------~~i~iwd~~~ 263 (408)
++.. .++.|.++| ..... ....+ .. ......++++|+|++++++ .+ +.|.++|..+
T Consensus 145 ---v~~~~~~~~v~viD-~~t~~------~~~~i-~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 145 ---VNCWSYQNRILKID-TETDK------VVDEL-TI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp ---EEECTTCCEEEEEE-TTTTE------EEEEE-EC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred ---EEcCCCCCEEEEEE-CCCCe------EEEEE-Ec-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 3332 478899888 43211 11121 11 1235678899999988877 44 7899999984
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccce
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIAS 343 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 343 (408)
.+....+.+ . .......++++|++ ..|.++.. .|.+||..+++.... ..+... ...
T Consensus 213 -~~v~~~~~~-----~-~g~~p~~la~~~d~-~~lyv~~~--~v~~~d~~t~~~~~~--~~~~~~------------~~~ 268 (328)
T 3dsm_A 213 -FTVEKQFKF-----K-LGDWPSEVQLNGTR-DTLYWINN--DIWRMPVEADRVPVR--PFLEFR------------DTK 268 (328)
T ss_dssp -TEEEEEEEC-----C-TTCCCEEEEECTTS-CEEEEESS--SEEEEETTCSSCCSS--CSBCCC------------SSC
T ss_pred -CeEEEEEec-----C-CCCCceeEEEecCC-CEEEEEcc--EEEEEECCCCceeee--eeecCC------------CCc
Confidence 444433221 1 12357899999998 66766544 899999988764211 111110 245
Q ss_pred eEEEEEcc-CCCEEEEe----C-CCeEEEEECCCCCCceeeeeecc
Q 015363 344 ISDIKFAR-NGRHILSR----D-YMTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 344 i~~~~~sp-dg~~l~s~----~-d~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
...++++| ++++.++. . ++.|.+||.+ ++.++++..-.
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~--g~~~~~i~~G~ 312 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ--GKLIDEFYVGI 312 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT--CCEEEEEEEEE
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCC--CCEEEEEEecc
Confidence 78899999 56666665 4 4899999996 68888886543
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=1.1e-11 Score=104.91 Aligned_cols=250 Identities=8% Similarity=0.070 Sum_probs=159.1
Q ss_pred CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEEeecCC
Q 015363 46 SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSAN 125 (408)
Q Consensus 46 ~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~ 125 (408)
.+++|++++.++.|.+||.++++. +..+..+.. ..+.++.+.| +
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~-----------------------~w~~~~~~~-----------~~~~~~~~~p--d 47 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI-----------------------VWEYPLEKG-----------WECNSVAATK--A 47 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE-----------------------EEEEECCTT-----------CCCCEEEECT--T
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE-----------------------EEEeCCCcc-----------CCCcCeEECC--C
Confidence 467899999999999999877753 333443321 2377888864 5
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCC-C
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGG-V 204 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~ 204 (408)
|++++ +.++.|..||. +++.+..+...... .+. .+.+.++|+.+ ++.+. +
T Consensus 48 G~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~-------~~~-------~~~~~~dG~~l------------v~~~~~~ 98 (276)
T 3no2_A 48 GEILF--SYSKGAKMITR-DGRELWNIAAPAGC-------EMQ-------TARILPDGNAL------------VAWCGHP 98 (276)
T ss_dssp SCEEE--ECBSEEEEECT-TSCEEEEEECCTTC-------EEE-------EEEECTTSCEE------------EEEESTT
T ss_pred CCEEE--eCCCCEEEECC-CCCEEEEEcCCCCc-------ccc-------ccEECCCCCEE------------EEecCCC
Confidence 87777 45788999999 78777766653111 122 45677788776 44333 4
Q ss_pred ceeeeceeeeccccccccccc-eeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCc
Q 015363 205 SSLRLPVVVTSQETNLVAGCR-RIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLT 282 (408)
Q Consensus 205 ~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 282 (408)
+.+..++ . +.....+.. ......+......+++.++|+++++. .++.|..||.+ ++...+. . . .
T Consensus 99 ~~v~~vd-~---~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~-~-------~-~ 164 (276)
T 3no2_A 99 STILEVN-M---KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSV-K-------L-S 164 (276)
T ss_dssp EEEEEEC-T---TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEE-E-------C-S
T ss_pred CEEEEEe-C---CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEE-E-------C-C
Confidence 4444433 1 111100000 00001122334556789999999998 89999999998 6554442 1 1 1
Q ss_pred CCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCC
Q 015363 283 EVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYM 362 (408)
Q Consensus 283 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~ 362 (408)
..+.++...+++ ++++++..+++|..+|..+++.+ ..+.....+. .....+..+...++|..+++...|
T Consensus 165 ~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG~~~----w~~~~~~~~~------~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 165 GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESNRIV----RRVNANDIEG------VQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp SCCCEEEECTTS-CEEEECBTTSEEEEECTTTCCEE----EEEEGGGSBS------CCCSEEEEEEECTTSCEEEEEECT
T ss_pred CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCCcEE----EEecCCCCCC------ccccccccceEcCCCCEEEEeccC
Confidence 334567888999 88888888889999999988765 3333221000 001357888999999999887422
Q ss_pred ---------eEEEEECCCCCCceeeeeecccc
Q 015363 363 ---------TLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 363 ---------~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
..+++.++..++.+-.+..+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~ 265 (276)
T 3no2_A 234 HDREAGKGKHPQLVEIDSEGKVVWQLNDKVKF 265 (276)
T ss_dssp TCTTGGGSCCCSEEEECTTSBEEEEECCTTTS
T ss_pred ccccccccCCceEEEECCCCCEEEEecCcccc
Confidence 44677776568888888776664
No 187
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.48 E-value=2.9e-11 Score=105.58 Aligned_cols=237 Identities=12% Similarity=0.108 Sum_probs=148.6
Q ss_pred cceeEEEEeecCCCcEEEEEeCC------------------------CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeE
Q 015363 113 EKINKIRWCQSANSALYLLSTND------------------------KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIF 168 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d------------------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 168 (408)
..+.+|++. ++|.++++...+ ++|.+||..+++......... .
T Consensus 24 ~~v~~va~d--~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-------~---- 90 (329)
T 3fvz_A 24 GQVSGVALD--SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL-------F---- 90 (329)
T ss_dssp SCEEEEEEC--TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT-------C----
T ss_pred CCceEEEEC--CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc-------c----
Confidence 559999995 458888877766 479999998888765433111 0
Q ss_pred eecCCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeec--------cccccceEEEE
Q 015363 169 GSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYA--------HAHDYHINSIS 240 (408)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~v~~i~ 240 (408)
..+..+++.++|+.+ ++...++.|+.|+ ...... ....+- ..+......++
T Consensus 91 ---~~p~gia~d~~g~l~------------v~d~~~~~v~~~~-~~g~~~-----~~~~~~~~~~~g~~~~~~~~P~~ia 149 (329)
T 3fvz_A 91 ---YLPHGLSIDTDGNYW------------VTDVALHQVFKLD-PHSKEG-----PLLILGRSMQPGSDQNHFCQPTDVA 149 (329)
T ss_dssp ---SSEEEEEECTTSCEE------------EEETTTTEEEEEC-TTCSSC-----CSEEESBTTBCCCSTTCCSSEEEEE
T ss_pred ---CCceEEEECCCCCEE------------EEECCCCEEEEEe-CCCCeE-----EEEEecccCCCCCCccccCCCcEEE
Confidence 122368899999865 7777788899888 332210 111110 23334688999
Q ss_pred eCC-CCCEEEEe--cCCeEEEEeCCCCCceeeEeecCCCc---ccCCcCCeEEEEEcCC-CCceEEEEeCCCeEEEEEcC
Q 015363 241 NNS-DGETFISA--DDLRINLWNLEISNQSFNIVDVKPAN---MEDLTEVITSAEFHPT-HCNMLAYSSSKGSIRLIDMR 313 (408)
Q Consensus 241 ~~~-~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~p~-~~~~l~s~~~dg~i~iwd~~ 313 (408)
++| ++.++++. .++.|++||.. + .....+...... ...+......++++|+ + .++++...+++|++||..
T Consensus 150 ~~~~~g~lyv~d~~~~~~I~~~~~~-g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g-~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 150 VEPSTGAVFVSDGYCNSRIVQFSPS-G-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD-QLCVADRENGRIQCFKTD 226 (329)
T ss_dssp ECTTTCCEEEEECSSCCEEEEECTT-S-CEEEEECEECCSSSCCTTEESCEEEEEEETTTT-EEEEEETTTTEEEEEETT
T ss_pred EeCCCCeEEEEeCCCCCeEEEEcCC-C-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCC-EEEEEECCCCEEEEEECC
Confidence 999 78888876 48999999954 3 333332110000 0123345789999999 6 888888889999999998
Q ss_pred CCceecccccccccccCCCCccccccccceeEEEEEcc------CCCEEEEeC-CCeEEEEECCCCCCceeeee---ecc
Q 015363 314 QSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFAR------NGRHILSRD-YMTLKLWDINMDSGPVATFQ---VHE 383 (408)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp------dg~~l~s~~-d~~v~~wd~~~~~~~~~~~~---~~~ 383 (408)
+++.+ ..+... .+...+..++|+| +|+..++.. +..|++||+.+ ++.+..+. ++.
T Consensus 227 ~G~~~----~~~~~~----------~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~ 291 (329)
T 3fvz_A 227 TKEFV----REIKHA----------SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKHF 291 (329)
T ss_dssp TCCEE----EEECCT----------TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSSCC
T ss_pred CCcEE----EEEecc----------ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCCcc
Confidence 77654 333221 1124678899999 333222222 25899999987 78888774 333
Q ss_pred cccceEEecCCCeeeeee
Q 015363 384 HLRPKVMHSSKNYFMGLD 401 (408)
Q Consensus 384 ~~~~~~~~~~~~~~~~~d 401 (408)
.....+..--++.++..|
T Consensus 292 ~~p~~ia~~~dG~lyvad 309 (329)
T 3fvz_A 292 DMPHDIVASEDGTVYIGD 309 (329)
T ss_dssp SSEEEEEECTTSEEEEEE
T ss_pred CCeeEEEECCCCCEEEEE
Confidence 333344433344444443
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.46 E-value=9.3e-12 Score=109.54 Aligned_cols=240 Identities=9% Similarity=-0.001 Sum_probs=140.4
Q ss_pred eeccceEEEEECCCCCeEEEee---------cCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGD---------RGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEF 103 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~ 103 (408)
.....+..+++ ||+++|... .++.|.+|++.+++.. .+
T Consensus 12 ~~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~------------------------~l------- 58 (347)
T 2gop_A 12 AKFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR------------------------FI------- 58 (347)
T ss_dssp CCSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE------------------------EE-------
T ss_pred eeeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE------------------------Ec-------
Confidence 34456778888 898887643 3567889998766421 11
Q ss_pred ccccccccccceeEEEEeecCCCcEEEEEeCC---C--eEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeE
Q 015363 104 DYLKSLEIEEKINKIRWCQSANSALYLLSTND---K--TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKS 178 (408)
Q Consensus 104 ~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d---~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (408)
..+..++|+|+ |++|+.++.+ + .|.+|++.+++......... +. .+.
T Consensus 59 ---------~~~~~~~~SpD--g~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~----------~~-------~~~ 110 (347)
T 2gop_A 59 ---------ENATMPRISPD--GKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN----------IR-------SLE 110 (347)
T ss_dssp ---------ESCEEEEECTT--SSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE----------EE-------EEE
T ss_pred ---------ccCCCeEECCC--CCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC----------cc-------cee
Confidence 12778999755 8888887643 3 47788888887665544321 22 688
Q ss_pred EccCCCeeeccccccc--------CccccC--C-----CCCceeeeceeeeccccccccccceeeccccccceEEEEeCC
Q 015363 179 YMANGGCGERNFGCAS--------NDSSFP--P-----GGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS 243 (408)
Q Consensus 179 ~~~~~~~l~~~~~~~~--------~~~~~~--~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 243 (408)
|+|+|+.+........ ..+.+. + .....|.+|+ +.. +...+.+ .. . .+..++|+|
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d-~~~------~~~~~~l-~~-~-~~~~~~~sp 180 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD-TES------EEVIEEF-EK-P-RFSSGIWHR 180 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE-TTT------TEEEEEE-EE-E-TTCEEEEET
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE-CCC------CeEEeee-cC-C-CcccccCCC
Confidence 9999988733221000 000000 0 1135677777 322 1111222 22 2 677899999
Q ss_pred CCCEEEEe-cC------C-eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC--------CeE
Q 015363 244 DGETFISA-DD------L-RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK--------GSI 307 (408)
Q Consensus 244 ~~~~l~~~-~d------~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--------g~i 307 (408)
+| +++++ .+ . ...+|.+. .+....+ ..+ ..+..+ +|+| +.|+.++.+ ..|
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l--------~~~-~~~~~~--spdg-~~l~~~~~~~~~~~~~~~~l 246 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKM--------FEK-VSFYAV--DSDG-ERILLYGKPEKKYMSEHNKL 246 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEE--------EEE-ESEEEE--EECS-SCEEEEECCSSSCCCSSCEE
T ss_pred Ce-EEEEEecccccccccccccEEEeC-CCceEEe--------ccC-cceeeE--CCCC-CEEEEEEccccCCccccceE
Confidence 99 77766 33 2 44555555 4443332 223 344444 9999 777766643 468
Q ss_pred EEEEcCCCceecccccccccccCCCCccccccccceeEE-EEEccCCCEEEEeC-CCeEEEEECCCCCCceeee
Q 015363 308 RLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD-IKFARNGRHILSRD-YMTLKLWDINMDSGPVATF 379 (408)
Q Consensus 308 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~-~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~ 379 (408)
.+|| +++.. .....+ ...+.. +.|+ |+ ++++++ ++.++|| +++ ++....+
T Consensus 247 ~~~d--~~~~~----~l~~~~------------~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~-g~~~~~~ 298 (347)
T 2gop_A 247 YIYD--GKEVM----GILDEV------------DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD-GEIKPIA 298 (347)
T ss_dssp EEEC--SSCEE----ESSTTC------------CSEEEEEEEET-TE-EEEEEEETTEEEEE-EES-SSEEEEE
T ss_pred EEEC--CCceE----eccccC------------CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC-CceEEEe
Confidence 8888 44321 222222 256776 8999 88 777775 6899999 884 5554433
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.45 E-value=4.3e-10 Score=104.64 Aligned_cols=262 Identities=12% Similarity=0.018 Sum_probs=157.8
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeC--CCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERT--DTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
....+..+.|+|||+++++++.++.|.+||+. +.+ .+..+...
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~-----------------------~v~~i~~G------------ 239 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT-----------------------TVAEIKIG------------ 239 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC-----------------------EEEEEECC------------
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc-----------------------EeEEEecC------------
Confidence 34456799999999999999999999999985 332 12233222
Q ss_pred ccceeEEEEee--cCCCcEEEEEe-CCCeEEEEEcCCCcEEEEeccCCCCc---ccCCCCCeEeecCCceeeEEccCCCe
Q 015363 112 EEKINKIRWCQ--SANSALYLLST-NDKTIKLWKVQEKKVKKVFDWNVHPE---KAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 112 ~~~v~~v~~~p--~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
.....++|+| .++|++++++. .+++|.++|..+.+.+.......... ...+...+. .+..++++..
T Consensus 240 -~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva-------~i~~s~~~~~ 311 (567)
T 1qks_A 240 -SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA-------AILASHYRPE 311 (567)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE-------EEEECSSSSE
T ss_pred -CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceE-------EEEEcCCCCE
Confidence 2367899962 13588877765 56999999999988877665432110 000111121 3445555443
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCC
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEI 263 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~ 263 (408)
+ ++.....+.|.++| ....+... ... .........+.|+|++++|+++ .++.|.++|+.+
T Consensus 312 ~-----------vv~~~~~g~v~~vd-~~~~~~~~----v~~--i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 312 F-----------IVNVKETGKILLVD-YTDLNNLK----TTE--ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp E-----------EEEETTTTEEEEEE-TTCSSEEE----EEE--EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred E-----------EEEecCCCeEEEEe-cCCCccce----eee--eeccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 2 35556678888877 32211100 011 1122446688999999998776 689999999994
Q ss_pred CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe-CCCeEEEEEcCCCceec---ccccccccccCCCCcccccc
Q 015363 264 SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS-SKGSIRLIDMRQSALCD---THSKLFEEQEAPGTRSFFTE 339 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 339 (408)
.+....+++- ....|.+.-..+ ++|++..+++++. .++.|.++|..+.+... +.++.+....
T Consensus 374 -~kl~~~i~vg--g~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g---------- 439 (567)
T 1qks_A 374 -GKLVAIEDTG--GQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG---------- 439 (567)
T ss_dssp -TEEEEEEECS--SSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC----------
T ss_pred -CcEEEEEecc--CcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC----------
Confidence 4454444320 122343321222 6888535666654 46899999998732100 1113333221
Q ss_pred ccceeEEEEEccCCCEEEEeC--------CCeEEEEECCCC
Q 015363 340 IIASISDIKFARNGRHILSRD--------YMTLKLWDINMD 372 (408)
Q Consensus 340 h~~~i~~~~~spdg~~l~s~~--------d~~v~~wd~~~~ 372 (408)
..-..+..+|++++|.... ..+|.++|+.+.
T Consensus 440 --~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 440 --GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp --SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred --CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 1223467899999998864 259999999863
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.45 E-value=5.5e-11 Score=115.06 Aligned_cols=216 Identities=13% Similarity=0.075 Sum_probs=131.4
Q ss_pred cceeEEEEeecCCCcEEEEEeCCC-----eEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 113 EKINKIRWCQSANSALYLLSTNDK-----TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
..+..++|+| ||++||.+..++ .|++||+.+++.......... ...+.|+|||+.+
T Consensus 125 ~~~~~~~~SP--Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~----------------~~~~~wspDg~~l- 185 (710)
T 2xdw_A 125 VALRGYAFSE--DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVK----------------FSCMAWTHDGKGM- 185 (710)
T ss_dssp EEEEEEEECT--TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEEC----------------SCCEEECTTSSEE-
T ss_pred EEEEEEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcc----------------cceEEEEeCCCEE-
Confidence 3588899975 488998876433 899999999987653221110 0158999999987
Q ss_pred cccccccCccccCCCCC----------------ceeeeceeeeccccccccccceee-ccccccceEEEEeCCCCCEEEE
Q 015363 188 RNFGCASNDSSFPPGGV----------------SSLRLPVVVTSQETNLVAGCRRIY-AHAHDYHINSISNNSDGETFIS 250 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~~~----------------~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~~ 250 (408)
+.+..+ ..|++|+ +..... .....+ ...+...+..+.|+|||++|+.
T Consensus 186 -----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-l~t~~~----~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 249 (710)
T 2xdw_A 186 -----------FYNAYPQQDGKSDGTETSTNLHQKLYYHV-LGTDQS----EDILCAEFPDEPKWMGGAELSDDGRYVLL 249 (710)
T ss_dssp -----------EEEECCCCSSCCSSSCCCCCCCCEEEEEE-TTSCGG----GCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred -----------EEEEECCccccccccccccCCCCEEEEEE-CCCCcc----cceEEeccCCCCeEEEEEEEcCCCCEEEE
Confidence 333222 3377777 422110 001111 1224455788999999999887
Q ss_pred e-c-----CCeEEEEeCCC------CCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC----CeEEEEEcCC
Q 015363 251 A-D-----DLRINLWNLEI------SNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK----GSIRLIDMRQ 314 (408)
Q Consensus 251 ~-~-----d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~ 314 (408)
+ . +..|++||+.. +...... +..+...+.. .|+|+| ..|+..+.+ +.|.+||+.+
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-------l~~~~~~~~~-~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGILKWVK-------LIDNFEGEYD-YVTNEG-TVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE-------EECSSSSCEE-EEEEET-TEEEEEECTTCTTCEEEEEETTS
T ss_pred EEEccCCCccEEEEEECcccccccCCccceEE-------eeCCCCcEEE-EEeccC-CEEEEEECCCCCCCEEEEEeCCC
Confidence 5 3 57899999985 2212222 2334444444 588998 555555442 3699999987
Q ss_pred CceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CC--eEEEEECCCCCCceeeeeecccc
Q 015363 315 SALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YM--TLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~--~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
+... ..+.+..+.. ...+..++|++++.++++.. ++ .|.+|++.+ ++.++.+..+.+.
T Consensus 321 ~~~~--~~~~l~~~~~----------~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~ 381 (710)
T 2xdw_A 321 PEES--KWKVLVPEHE----------KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGS 381 (710)
T ss_dssp CCGG--GCEEEECCCS----------SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSE
T ss_pred CCcc--cceeccCCCC----------CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC-CCEEEecCCCCce
Confidence 6310 1123333310 12678899997777777774 55 566777755 6777777766443
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.44 E-value=1.8e-11 Score=108.21 Aligned_cols=229 Identities=10% Similarity=0.055 Sum_probs=133.9
Q ss_pred cceEEEEECCCCCeEEEeec--CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeee-eccCCcccccccccccc
Q 015363 36 DIISAIEFDKSGDHLATGDR--GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTE-FQSHEPEFDYLKSLEIE 112 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~h~~~~~~~~~~~~~ 112 (408)
.....++|+|||++|+++.. ++.|.+||+.+++. +.. +....
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~-----------------------~~~~i~~~~------------ 152 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY-----------------------VEDVTAAAG------------ 152 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE-----------------------EEEEGGGTT------------
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE-----------------------EEEEecCCC------------
Confidence 45667999999999998874 57999999887642 222 21111
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCC-CcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQE-KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
...+.+.|.. ...+++.+.||.+.+|+... ++......... ++.....+..+...+++..+
T Consensus 153 --~~~v~~~p~~-~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~----- 214 (361)
T 2oiz_A 153 --CWSVIPQPNR-PRSFMTICGDGGLLTINLGEDGKVASQSRSKQ----------MFSVKDDPIFIAPALDKDKA----- 214 (361)
T ss_dssp --EEEEEECTTS-SSEEEEEETTSSEEEEEECTTSSEEEEEECCC----------CSCTTTSCBCSCCEECSSEE-----
T ss_pred --cceeEEcCCC-CeeEEEECCCCcEEEEEECCCCcEeeeccccc----------eEcCCCCceEEEecccCCEE-----
Confidence 1224455442 25788889999999999865 55442211000 00000011123345555443
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceee-----ccc-cccceEEEEeCCCCCEEEEe-c-----------C
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIY-----AHA-HDYHINSISNNSDGETFISA-D-----------D 253 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~v~~i~~~~~~~~l~~~-~-----------d 253 (408)
+..+.++.+.++| +........ ...... ..+ .......++++|+++.+.++ . .
T Consensus 215 -------~~~~~~~~v~v~d-~~~~~~~~~-~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 215 -------HFVSYYGNVYSAD-FSGDEVKVD-GPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp -------EEEBTTSEEEEEE-CSSSSCEEE-EEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred -------EEEeCCCeEEEEE-ecCCCceec-ccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence 3334567788877 432111000 000000 000 00111236899998877765 3 3
Q ss_pred CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCC--ceecccccccccccCC
Q 015363 254 LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQS--ALCDTHSKLFEEQEAP 331 (408)
Q Consensus 254 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~ 331 (408)
+.|.+||+.+ .+.+.. +..+. +.+++|+|+| ++|++++. +.|.+||..++ +.+ ..+...
T Consensus 286 ~~v~viD~~t-~~~v~~-------i~~~~--p~~ia~spdg-~~l~v~n~-~~v~v~D~~t~~l~~~----~~i~~~--- 346 (361)
T 2oiz_A 286 AEIWVMDTKT-KQRVAR-------IPGRD--ALSMTIDQQR-NLMLTLDG-GNVNVYDISQPEPKLL----RTIEGA--- 346 (361)
T ss_dssp SEEEEEETTT-TEEEEE-------EECTT--CCEEEEETTT-TEEEEECS-SCEEEEECSSSSCEEE----EEETTS---
T ss_pred ceEEEEECCC-CcEEEE-------EecCC--eeEEEECCCC-CEEEEeCC-CeEEEEECCCCcceee----EEeccC---
Confidence 4899999984 444444 23334 7899999999 78887776 99999999998 654 343222
Q ss_pred CCccccccccceeEEEEEccCCC
Q 015363 332 GTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 332 ~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
......++++|+|+
T Consensus 347 ---------G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 347 ---------AEASLQVQFHPVGG 360 (361)
T ss_dssp ---------CSSEEEEEECCCSC
T ss_pred ---------CCCcEEEEecCCCC
Confidence 23567899999985
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.43 E-value=1.7e-10 Score=107.32 Aligned_cols=250 Identities=10% Similarity=0.088 Sum_probs=153.1
Q ss_pred CCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEEeecC
Q 015363 45 KSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSA 124 (408)
Q Consensus 45 ~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~ 124 (408)
|.+.++++...++.|.++|..+++. +..+... ..+..+.|+|
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v-----------------------~~~i~~g-------------~~p~~v~~Sp-- 206 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEI-----------------------KTVLDTG-------------YAVHISRLSA-- 206 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCE-----------------------EEEEECS-------------SCEEEEEECT--
T ss_pred CCceEEEEeCCCCeEEEEECCCCeE-----------------------EEEEeCC-------------CCccceEECC--
Confidence 4455777778889999999887753 2233222 2367889965
Q ss_pred CCcEEEEEeCCCeEEEEEcC--CCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEc----cCCCeeecccccccCccc
Q 015363 125 NSALYLLSTNDKTIKLWKVQ--EKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYM----ANGGCGERNFGCASNDSS 198 (408)
Q Consensus 125 ~~~~l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~ 198 (408)
+|+++++++.|+.|.+||+. +.+....+.... .+..++++ |+|+.+ +
T Consensus 207 DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~----------------~P~~ia~s~~~~pDGk~l-----------~ 259 (567)
T 1qks_A 207 SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS----------------EARSIETSKMEGWEDKYA-----------I 259 (567)
T ss_dssp TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS----------------EEEEEEECCSTTCTTTEE-----------E
T ss_pred CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC----------------CCceeEEccccCCCCCEE-----------E
Confidence 58899999999999999995 666554433321 12268899 699987 2
Q ss_pred cCCCCCceeeeceeeeccccccccccceeecc---cc-ccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceeeEee
Q 015363 199 FPPGGVSSLRLPVVVTSQETNLVAGCRRIYAH---AH-DYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFNIVD 272 (408)
Q Consensus 199 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~ 272 (408)
++...++.|.++| ....+..........-.. .| ...+..+..++++..++.. .+|.|.++|...... ..+..
T Consensus 260 v~n~~~~~v~ViD-~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~-~~v~~ 337 (567)
T 1qks_A 260 AGAYWPPQYVIMD-GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN-LKTTE 337 (567)
T ss_dssp EEEEETTEEEEEE-TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE-EEEEE
T ss_pred EEEccCCeEEEEE-CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc-ceeee
Confidence 3344557888877 322211110000000000 12 2267788899988776665 789999999984432 22211
Q ss_pred cCCCcccCCcCCeEEEEEcCCCCceEE-EEeCCCeEEEEEcCCCceeccccccccc-ccCCCCccccccccc-eeEEEEE
Q 015363 273 VKPANMEDLTEVITSAEFHPTHCNMLA-YSSSKGSIRLIDMRQSALCDTHSKLFEE-QEAPGTRSFFTEIIA-SISDIKF 349 (408)
Q Consensus 273 ~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~h~~-~i~~~~~ 349 (408)
+ ........+.|+|++ ++|+ +...++.|.++|+.+++.. ..+.. .. ..|.+ .+. + +
T Consensus 338 -----i-~~~~~~~d~~~~pdg-r~~~va~~~sn~V~ViD~~t~kl~----~~i~vgg~--------~Phpg~g~~-~-~ 396 (567)
T 1qks_A 338 -----I-SAERFLHDGGLDGSH-RYFITAANARNKLVVIDTKEGKLV----AIEDTGGQ--------TPHPGRGAN-F-V 396 (567)
T ss_dssp -----E-ECCSSEEEEEECTTS-CEEEEEEGGGTEEEEEETTTTEEE----EEEECSSS--------SBCCTTCEE-E-E
T ss_pred -----e-eccccccCceECCCC-CEEEEEeCCCCeEEEEECCCCcEE----EEEeccCc--------CCCCcccee-e-E
Confidence 1 123446788999999 5554 4556889999999998754 22221 11 11111 222 2 5
Q ss_pred ccC-CCEEEEe--CCCeEEEEECCCC------CCceeeeeec
Q 015363 350 ARN-GRHILSR--DYMTLKLWDINMD------SGPVATFQVH 382 (408)
Q Consensus 350 spd-g~~l~s~--~d~~v~~wd~~~~------~~~~~~~~~~ 382 (408)
+|+ +...+++ +++.|.++|.+.. .+.++++...
T Consensus 397 ~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~ 438 (567)
T 1qks_A 397 HPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL 438 (567)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred CCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC
Confidence 887 4455555 3589999999862 2456666553
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.42 E-value=3.4e-11 Score=117.01 Aligned_cols=248 Identities=14% Similarity=0.064 Sum_probs=146.1
Q ss_pred eccceEEEEECCCCCeEEEeecC-----CeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRG-----GRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
|...+..++|||||++||.++.+ ..|++||+.+++.. ....+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~------------------------~~~~~~-------- 208 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL------------------------ADELKW-------- 208 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEE------------------------EEEEEE--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC------------------------CccCCC--------
Confidence 33478899999999999887654 36999999887531 111111
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCe--------------EEEEEcCCCcE--EEEeccCCCCcccCCCCCeEeecC
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKT--------------IKLWKVQEKKV--KKVFDWNVHPEKAAGNGPIFGSHV 172 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~--------------i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~ 172 (408)
..+..++|+|+ +.|+.++.|+. |++|++.++.. ..+.....++ ..+.
T Consensus 209 ----~~~~~~~wspD---~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~------~~~~---- 271 (741)
T 1yr2_A 209 ----VKFSGLAWLGN---DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELP------KRGH---- 271 (741)
T ss_dssp ----EESCCCEESTT---SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCT------TCEE----
T ss_pred ----ceeccEEEECC---CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCC------eEEE----
Confidence 22467899654 57777765543 88999877652 2232222111 1122
Q ss_pred CceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-
Q 015363 173 SAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA- 251 (408)
Q Consensus 173 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~- 251 (408)
.+.|+|||+.+...... .......|.+|| +..... .+.+.+ ..+...+.... +|+++.|+..
T Consensus 272 ---~~~~SpDG~~l~~~~~~-------~~~~~~~l~~~d-~~~~~~----~~~~~l-~~~~~~~~~~~-~~dg~~l~~~s 334 (741)
T 1yr2_A 272 ---GASVSSDGRWVVITSSE-------GTDPVNTVHVAR-VTNGKI----GPVTAL-IPDLKAQWDFV-DGVGDQLWFVS 334 (741)
T ss_dssp ---EEEECTTSCEEEEEEEC-------TTCSCCEEEEEE-EETTEE----CCCEEE-ECSSSSCEEEE-EEETTEEEEEE
T ss_pred ---EEEECCCCCEEEEEEEc-------cCCCcceEEEEE-CCCCCC----cccEEe-cCCCCceEEEE-eccCCEEEEEE
Confidence 67899999987221100 001245788888 543210 101222 22333333433 4888877765
Q ss_pred c----CCeEEEEeCCCC-CceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcC-CCceeccccccc
Q 015363 252 D----DLRINLWNLEIS-NQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMR-QSALCDTHSKLF 325 (408)
Q Consensus 252 ~----d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~ 325 (408)
. ++.|.+||+... .....+ +..+...+..++++ ++ .++++...|+..+||.+. .+... +.+
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l-------~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~~~----~~l 401 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTV-------VPESKDNLESVGIA-GN-RLFASYIHDAKSQVLAFDLDGKPA----GAV 401 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEE-------ECCCSSEEEEEEEE-BT-EEEEEEEETTEEEEEEEETTSCEE----EEC
T ss_pred CCCCCCCEEEEEeCCCCccccEEE-------ecCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCCce----eec
Confidence 3 456999998853 233333 23344456677887 44 788888889988777654 23222 233
Q ss_pred ccccCCCCccccccccceeEEEEEccCCCEEE-Ee---C-CCeEEEEECCC
Q 015363 326 EEQEAPGTRSFFTEIIASISDIKFARNGRHIL-SR---D-YMTLKLWDINM 371 (408)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~-s~---~-d~~v~~wd~~~ 371 (408)
..+. .+.+..+.++|++..|+ +. . .++|++||+.+
T Consensus 402 ~~~~-----------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 402 SLPG-----------IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp BCSS-----------SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred cCCC-----------CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 3221 25688999999987555 22 2 28999999976
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.42 E-value=1.1e-10 Score=100.22 Aligned_cols=214 Identities=8% Similarity=0.019 Sum_probs=137.4
Q ss_pred cceeEEEEeecCCCc-EEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 113 EKINKIRWCQSANSA-LYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
....+++|.|+ |. +++++..++.|..|+..++ . ..+... .+.+. .++++++|+.+
T Consensus 28 ~~~eg~~~d~~--g~~l~~~~~~~~~i~~~~~~~~-~-~~~~~~--------~~~~~-------~l~~~~dg~l~----- 83 (296)
T 3e5z_A 28 TWTEGPVYVPA--RSAVIFSDVRQNRTWAWSDDGQ-L-SPEMHP--------SHHQN-------GHCLNKQGHLI----- 83 (296)
T ss_dssp SSEEEEEEEGG--GTEEEEEEGGGTEEEEEETTSC-E-EEEESS--------CSSEE-------EEEECTTCCEE-----
T ss_pred ccccCCeEeCC--CCEEEEEeCCCCEEEEEECCCC-e-EEEECC--------CCCcc-------eeeECCCCcEE-----
Confidence 44788999765 76 7778888999999999987 3 332221 11222 68899999875
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEE----e-c-------------C
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFIS----A-D-------------D 253 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~----~-~-------------d 253 (408)
++...++.|.+|+ ......... ...........++.++++|+|+++++ | . .
T Consensus 84 -------v~~~~~~~i~~~d-~~~g~~~~~---~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~ 152 (296)
T 3e5z_A 84 -------ACSHGLRRLERQR-EPGGEWESI---ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPG 152 (296)
T ss_dssp -------EEETTTTEEEEEC-STTCCEEEE---ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSS
T ss_pred -------EEecCCCeEEEEc-CCCCcEEEE---eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCC
Confidence 6556667888888 422111100 00000111234678999999999887 3 1 2
Q ss_pred CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcC-CCce-ecccccccccccCC
Q 015363 254 LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMR-QSAL-CDTHSKLFEEQEAP 331 (408)
Q Consensus 254 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~-~~~~~~~~~~~~~~ 331 (408)
+.|..++.. +.... +..+......++|+|++ +++++.+.++.|.+|++. .+.. ... ..+..+
T Consensus 153 ~~l~~~~~~--g~~~~--------~~~~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~~g~~~~~~--~~~~~~--- 216 (296)
T 3e5z_A 153 RWVFRLAPD--GTLSA--------PIRDRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLNARGETEYQG--VHFTVE--- 216 (296)
T ss_dssp CEEEEECTT--SCEEE--------EECCCSSEEEEEECTTS-CEEEEETTTTEEEEEEECSSSCEEEEE--EEECCS---
T ss_pred cEEEEECCC--CCEEE--------eecCCCCCccEEECCCC-CEEEEeCCCCeEEEEEECCCCcCcCCC--eEeeCC---
Confidence 355555544 32222 22344567899999999 777777778999999997 4432 100 122111
Q ss_pred CCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCceeeeeecccccceEE
Q 015363 332 GTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKVM 390 (408)
Q Consensus 332 ~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
...+..++++++|+++++. ++.|.+||.+ ++.+..+..+.. ...+.
T Consensus 217 ---------~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~--g~~~~~~~~~~~-~~~~~ 262 (296)
T 3e5z_A 217 ---------PGKTDGLRVDAGGLIWASA-GDGVHVLTPD--GDELGRVLTPQT-TSNLC 262 (296)
T ss_dssp ---------SSCCCSEEEBTTSCEEEEE-TTEEEEECTT--SCEEEEEECSSC-CCEEE
T ss_pred ---------CCCCCeEEECCCCCEEEEc-CCeEEEECCC--CCEEEEEECCCC-ceeEE
Confidence 2456779999999988777 8899999985 688888887766 44443
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.41 E-value=3.3e-10 Score=100.17 Aligned_cols=256 Identities=9% Similarity=0.013 Sum_probs=143.8
Q ss_pred EEEECCCCCeEEEee----------cCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccC-Ccccccccc
Q 015363 40 AIEFDKSGDHLATGD----------RGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSH-EPEFDYLKS 108 (408)
Q Consensus 40 ~~~~s~~~~~l~sg~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h-~~~~~~~~~ 108 (408)
.++++|||++|+++. .++.|.+||..+.+.. ..+.-. ...+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~-----------------------~~i~~~~~~~~----- 121 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI-----------------------ADIELPDAPRF----- 121 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEE-----------------------EEEECCCcccc-----
Confidence 899999999988875 3678999998765431 111100 0000
Q ss_pred cccccceeEEEEeecCCCcEEEEEeC--CCeEEEEEcCCCcEEEE-eccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTN--DKTIKLWKVQEKKVKKV-FDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
........+.|+|+ |++|+++.. ++.|.++| .+++.... ..... ++.+.|++..
T Consensus 122 -~~g~~p~~~~~spD--G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-------------------~~~~~~~~~~ 178 (373)
T 2mad_H 122 -DVGPYSWMNANTPN--NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-------------------CYHIHPGAPS 178 (373)
T ss_pred -ccCCCccceEECCC--CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-------------------eEEEEeCCCc
Confidence 00012457889654 889888864 58899999 98887655 43321 1233344432
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEE-EecCCeEEEEeCCCC
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFI-SADDLRINLWNLEIS 264 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~~d~~i~iwd~~~~ 264 (408)
. +++...++.+..++ . .............+ .....-.....+.+++..++ ....+.+.+.|+...
T Consensus 179 ~-----------~~~~~~dg~~~~vd-~-~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 179 T-----------FYLLCAQGGLAKTD-H-AGGAAGAGLVGAML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred e-----------EEEEcCCCCEEEEE-C-CCcEEEEEeccccc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 2 13344566666666 3 21111000000000 01111112344556655444 346788999998733
Q ss_pred Cc-eeeEeecCCCc---ccCCcCCeEEEEEcCCCCceEEEEeC----------CCeEEEEEcCCCceecccccccccccC
Q 015363 265 NQ-SFNIVDVKPAN---MEDLTEVITSAEFHPTHCNMLAYSSS----------KGSIRLIDMRQSALCDTHSKLFEEQEA 330 (408)
Q Consensus 265 ~~-~~~~~~~~~~~---~~~~~~~v~~~~~~p~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 330 (408)
.. ....+++.... ..........+.++|++ ..+.++.. ++.|.++|+.+++.+ ..+...
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~-~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv----~~i~~g-- 317 (373)
T 2mad_H 245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSS-DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS----SQISLG-- 317 (373)
T ss_pred cceEeeeeeecCCcccccceecCceEeEEECCCC-CEEEEEeccCCcccccCCCCeEEEEECCCCEEE----EEEECC--
Confidence 21 11211110000 00012224457899998 55444432 358999999998765 444332
Q ss_pred CCCccccccccceeEEEEEccCCC-EEEEeC--CCeEEEEECCCCCCceeee
Q 015363 331 PGTRSFFTEIIASISDIKFARNGR-HILSRD--YMTLKLWDINMDSGPVATF 379 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~-~l~s~~--d~~v~~wd~~~~~~~~~~~ 379 (408)
.....++|+|||+ .++++. ++.|.++|+.+ ++.++++
T Consensus 318 -----------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t-~~vv~~i 357 (373)
T 2mad_H 318 -----------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA-GDQDQST 357 (373)
T ss_pred -----------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC-CCEEeee
Confidence 3478899999999 777764 59999999998 6887773
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.39 E-value=1.2e-10 Score=101.89 Aligned_cols=263 Identities=11% Similarity=0.103 Sum_probs=148.3
Q ss_pred EEEECCCCCeEEEee----------cCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 40 AIEFDKSGDHLATGD----------RGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 40 ~~~~s~~~~~l~sg~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
.++++|||++++++. .++.|.+||..+.+.. ..+.-..+. ..
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~-----------------------~~I~v~~g~-----r~ 133 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT-----------------------ADIELPDAP-----RF 133 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE-----------------------EEEEETTCC-----CC
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE-----------------------EEEECCCcc-----cc
Confidence 399999999887775 3678999998877531 121100000 00
Q ss_pred ccccceeEEEEeecCCCcEEEEEeC--CCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTN--DKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
........++|+ ++|++++++.. ++.|.++|+.+++....+...... .++..+ ...-+..++||+.+
T Consensus 134 ~~g~~P~~~a~s--pDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~-------~~~P~g-~~~~~~~~~DG~~~- 202 (386)
T 3sjl_D 134 LVGTYPWMTSLT--PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCY-------HIFPTA-PDTFFMHCRDGSLA- 202 (386)
T ss_dssp CBSCCGGGEEEC--TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEE-------EEEEEE-TTEEEEEETTSCEE-
T ss_pred ccCCCCceEEEc--CCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcc-------eeecCC-CceeEEECCCCCEE-
Confidence 000125568896 45888888763 689999999999988776543210 011000 00012445555544
Q ss_pred cccccccCccccCCC-CCceeeeceeeeccccccccccceeeccccccce-EEEEe-CCCCCEEEEecCCeEEEEeCCCC
Q 015363 188 RNFGCASNDSSFPPG-GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHI-NSISN-NSDGETFISADDLRINLWNLEIS 264 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~i~~-~~~~~~l~~~~d~~i~iwd~~~~ 264 (408)
+... ..+.+. + .. . ..+ ......+ ....| .++|++++...+++|.+.|....
T Consensus 203 -----------~v~~~~~g~v~--~-~~--------~--~~~-~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 203 -----------KVAFGTEGTPE--I-TH--------T--EVF-HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG 257 (386)
T ss_dssp -----------EEECCSSSCCE--E-EE--------C--CCC-SCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTS
T ss_pred -----------EEECCCCCeEE--E-ee--------c--cee-ccccccccccceeEcCCCcEEEEeCCCEEEEEECCCC
Confidence 2211 112221 0 00 0 000 0001111 11244 46787777667899999999743
Q ss_pred Cc-eeeEeec-CCCc--ccCCcCCeEEEEEcCCCCceEEEEeC----------CCeEEEEEcCCCceecccccccccccC
Q 015363 265 NQ-SFNIVDV-KPAN--MEDLTEVITSAEFHPTHCNMLAYSSS----------KGSIRLIDMRQSALCDTHSKLFEEQEA 330 (408)
Q Consensus 265 ~~-~~~~~~~-~~~~--~~~~~~~v~~~~~~p~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 330 (408)
.. ....+.+ .... ..........++++|++ ..++.... ..+|.+.|+.+++.+ +.+...
T Consensus 258 ~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~-~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~----~~i~vg-- 330 (386)
T 3sjl_D 258 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL-DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL----AKFEMG-- 330 (386)
T ss_dssp SCEECCCEESSCHHHHHTTEEECSSSCEEEETTT-TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----EEEEEE--
T ss_pred cceeecceeccccccccccccCCCcceeeECCCC-CeEEEEeccccccccCCCCCEEEEEECCCCeEE----EEEECC--
Confidence 32 2211110 0000 00011223357779998 55554432 257999999999775 444333
Q ss_pred CCCccccccccceeEEEEEccCCC-EEEEe-C-CCeEEEEECCCCCCceeeeeecccc
Q 015363 331 PGTRSFFTEIIASISDIKFARNGR-HILSR-D-YMTLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~-~l~s~-~-d~~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
..+..++++||++ +|+++ . ++.|.++|..+ ++.++++......
T Consensus 331 -----------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t-~k~~~~i~~~~~p 376 (386)
T 3sjl_D 331 -----------HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES-GEELRSVNQLGHG 376 (386)
T ss_dssp -----------EEECEEEECSSSSCEEEEEETTTTEEEEEETTT-CCEEEEECCCCSS
T ss_pred -----------CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC-CcEEEEecCCCCC
Confidence 3578999999997 67665 3 69999999998 7999988765443
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.39 E-value=1.9e-09 Score=92.36 Aligned_cols=239 Identities=8% Similarity=-0.018 Sum_probs=152.9
Q ss_pred ccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
...+.+++++++|.++++...++.|..|+.. +... .. .+.... ..
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~---------------------~~-~~~~~~------------~~ 100 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIK---------------------EY-TLPNPD------------SA 100 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE---------------------EE-ECSSTT------------CC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEE---------------------EE-eCCCcC------------CC
Confidence 4578999999999988877768889999865 2110 00 011111 44
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
+.++++. ++|.++++...++.|..||. +++......... ...+ ..+++.++|...
T Consensus 101 ~~~i~~~--~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~-------~~~~-------~~i~~~~~g~l~-------- 155 (299)
T 2z2n_A 101 PYGITEG--PNGDIWFTEMNGNRIGRITD-DGKIREYELPNK-------GSYP-------SFITLGSDNALW-------- 155 (299)
T ss_dssp EEEEEEC--TTSCEEEEETTTTEEEEECT-TCCEEEEECSST-------TCCE-------EEEEECTTSCEE--------
T ss_pred ceeeEEC--CCCCEEEEecCCceEEEECC-CCCEEEecCCCC-------CCCC-------ceEEEcCCCCEE--------
Confidence 8889885 55777777777889999998 555443221100 1112 267888888764
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeec
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDV 273 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~ 273 (408)
++...++.|..|+ . ... ............+.+++++++++++++. .++.|.+||. +.. ... +.
T Consensus 156 ----v~~~~~~~i~~~~-~-~g~------~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~-~~~-~~- 219 (299)
T 2z2n_A 156 ----FTENQNNAIGRIT-E-SGD------ITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE-ITE-FK- 219 (299)
T ss_dssp ----EEETTTTEEEEEC-T-TCC------EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEE-EE-
T ss_pred ----EEeCCCCEEEEEc-C-CCc------EEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc-EEE-EE-
Confidence 5555567788777 3 111 1111112334568899999999988777 6889999998 343 222 11
Q ss_pred CCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCC
Q 015363 274 KPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNG 353 (408)
Q Consensus 274 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg 353 (408)
...+...+.+++++++| +++++...++.|..||. .+.. ..+... .+...+.++++ ++|
T Consensus 220 ----~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~-----~~~~~~----------~~~~~~~~i~~-~~g 277 (299)
T 2z2n_A 220 ----IPTPNARPHAITAGAGI-DLWFTEWGANKIGRLTS-NNII-----EEYPIQ----------IKSAEPHGICF-DGE 277 (299)
T ss_dssp ----CSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEET-TTEE-----EEEECS----------SSSCCEEEEEE-CSS
T ss_pred ----CCCCCCCceeEEECCCC-CEEEeccCCceEEEECC-CCce-----EEEeCC----------CCCCccceEEe-cCC
Confidence 23345668999999999 77776667889999998 3432 122111 01246889999 999
Q ss_pred CEEEEeCCCeEEEEECCC
Q 015363 354 RHILSRDYMTLKLWDINM 371 (408)
Q Consensus 354 ~~l~s~~d~~v~~wd~~~ 371 (408)
++.++...+.|..++.++
T Consensus 278 ~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 278 TIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp CEEEEETTTEEEEEEEC-
T ss_pred CEEEEecCCcEEEEEcCc
Confidence 888877667788888765
No 198
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=3.2e-11 Score=105.88 Aligned_cols=213 Identities=11% Similarity=0.093 Sum_probs=129.0
Q ss_pred cCcccceeeecccCcCcccceeeccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccc
Q 015363 12 AQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFR 91 (408)
Q Consensus 12 ~~~~~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 91 (408)
...+.+|+...........+.-....++.+++++...++++|+.+ .+++|+++..+.. ....
T Consensus 14 ted~~Fk~l~~~~~~~~~~~~l~~~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~------~~~~----------- 75 (388)
T 1xip_A 14 SEDFGFKFLGQKQILPSFNEKLPFASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDH------ITSD----------- 75 (388)
T ss_dssp ESSCEEEEEEEEECSCCCTTCCCSSCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHH------HHSS-----------
T ss_pred ccccceEECCccccccCccccCCcccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhh------hccc-----------
Confidence 456666666432111111111133479999999999999999988 5667997644310 0000
Q ss_pred eeeeeccCCcccccccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeec
Q 015363 92 YKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSH 171 (408)
Q Consensus 92 ~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (408)
...+.......+.. |+.++| + +.+|+++ .++.|++||+.+........
T Consensus 76 --------~~~~~~~~~~~lp~-V~~l~f--d--~~~L~v~-~~~~l~v~dv~sl~~~~~~~------------------ 123 (388)
T 1xip_A 76 --------STPLTFKWEKEIPD-VIFVCF--H--GDQVLVS-TRNALYSLDLEELSEFRTVT------------------ 123 (388)
T ss_dssp --------SCCCCCSEEEECTT-EEEEEE--E--TTEEEEE-ESSEEEEEESSSTTCEEEEE------------------
T ss_pred --------cccccceEEeeCCC-eeEEEE--C--CCEEEEE-cCCcEEEEEchhhhccCccc------------------
Confidence 00000001112225 999999 4 6788888 88999999998765222110
Q ss_pred CCceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe
Q 015363 172 VSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA 251 (408)
Q Consensus 172 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 251 (408)
.|...+.++.+.+.. ++++
T Consensus 124 -----------------------------------------------------------~~~~~v~~i~~~~p~--~av~ 142 (388)
T 1xip_A 124 -----------------------------------------------------------SFEKPVFQLKNVNNT--LVIL 142 (388)
T ss_dssp -----------------------------------------------------------ECSSCEEEEEECSSE--EEEE
T ss_pred -----------------------------------------------------------eeecceeeEEecCCC--EEEE
Confidence 111223344444332 6666
Q ss_pred -cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccC
Q 015363 252 -DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA 330 (408)
Q Consensus 252 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 330 (408)
.||.|.+||+.... ... +...|++++|+|+| ++.|..||.+++|+...+..-. .+++...
T Consensus 143 ~~dG~L~v~dl~~~~-~~~-----------~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~--k~~I~~P-- 203 (388)
T 1xip_A 143 NSVNDLSALDLRTKS-TKQ-----------LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEK--QFEFSLP-- 203 (388)
T ss_dssp ETTSEEEEEETTTCC-EEE-----------EEESEEEEEECSSE---EEEEETTSCEEEEEEETTEEEE--EEEECCC--
T ss_pred ECCCCEEEEEccCCc-ccc-----------ccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCccccc--cceecCC--
Confidence 99999999998443 322 24579999999999 5778899999999887764200 0222111
Q ss_pred CCCccccc---cccceeEEEEEccCCCEEEE
Q 015363 331 PGTRSFFT---EIIASISDIKFARNGRHILS 358 (408)
Q Consensus 331 ~~~~~~~~---~h~~~i~~~~~spdg~~l~s 358 (408)
. .+. +|...|.++.|.+++.+|++
T Consensus 204 ---p-~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 204 ---S-ELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ---H-HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ---c-ccccccCCCeeEEEEEEecCCeEEEE
Confidence 0 011 23478999999999999987
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.38 E-value=6.9e-09 Score=88.91 Aligned_cols=239 Identities=8% Similarity=-0.032 Sum_probs=153.4
Q ss_pred ccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
...+.+++++++|+++++...++.|.+|+.. ++.. . ..+..+. ..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~---------------------~-~~~~~~~------------~~ 63 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK---------------------E-FEVPTPD------------AK 63 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE---------------------E-EECSSTT------------CC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE---------------------E-EECCCCC------------Cc
Confidence 4578899999999988777778899999976 3210 0 0111111 44
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
+.++++. ++|.++++...++.|..+|.. ++.... ..... ...+ ..+++.++|...
T Consensus 64 ~~~i~~~--~~g~l~v~~~~~~~v~~~d~~-g~~~~~-~~~~~------~~~~-------~~i~~~~~g~l~-------- 118 (300)
T 2qc5_A 64 VMCLIVS--SLGDIWFTENGANKIGKLSKK-GGFTEY-PLPQP------DSGP-------YGITEGLNGDIW-------- 118 (300)
T ss_dssp EEEEEEC--TTSCEEEEETTTTEEEEECTT-SCEEEE-ECSST------TCCE-------EEEEECSTTCEE--------
T ss_pred ceeEEEC--CCCCEEEEecCCCeEEEECCC-CCeEEe-cCCCC------CCCC-------ccceECCCCCEE--------
Confidence 7888884 557777776668899999988 554322 21100 0112 257777888764
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeec
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDV 273 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~ 273 (408)
++...++.|..++ .. ..............+..++++++++++++. .++.|..||.. .. .... .
T Consensus 119 ----v~~~~~~~i~~~~-~~-------g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-~~~~-~- 182 (300)
T 2qc5_A 119 ----FTQLNGDRIGKLT-AD-------GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT-GK-LEEY-P- 182 (300)
T ss_dssp ----EEETTTTEEEEEC-TT-------SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC-EEEE-E-
T ss_pred ----EEccCCCeEEEEC-CC-------CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC-Cc-EEEe-e-
Confidence 5555566777766 22 111111112234568899999999977777 68899999984 33 2221 1
Q ss_pred CCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCC
Q 015363 274 KPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNG 353 (408)
Q Consensus 274 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg 353 (408)
...+...+..+++++++ .++++....+.|.+||. ++.... ..+... ...+.+++++++|
T Consensus 183 ----~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~---~~~~~~------------~~~~~~i~~d~~g 241 (300)
T 2qc5_A 183 ----LPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITT-TGEISE---YDIPTP------------NARPHAITAGKNS 241 (300)
T ss_dssp ----CSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEE---EECSST------------TCCEEEEEECSTT
T ss_pred ----CCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcC-CCcEEE---EECCCC------------CCCceEEEECCCC
Confidence 22334568899999999 77777666788999998 443321 111111 2457899999999
Q ss_pred CEEEEeC-CCeEEEEECC
Q 015363 354 RHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 354 ~~l~s~~-d~~v~~wd~~ 370 (408)
++.++.. ++.|..||..
T Consensus 242 ~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 242 EIWFTEWGANQIGRITND 259 (300)
T ss_dssp CEEEEETTTTEEEEECTT
T ss_pred CEEEeccCCCeEEEECCC
Confidence 9777764 5899999983
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.37 E-value=4.3e-10 Score=100.91 Aligned_cols=261 Identities=9% Similarity=-0.030 Sum_probs=149.8
Q ss_pred ccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
-.....|+|+++++++++...++.|++||.+++.. ..+.... ..
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~------------------------~~~~~~~------------~~ 173 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV------------------------TTVHPGF------------KG 173 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEE------------------------EEEEETC------------CB
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEE------------------------EEeeccC------------CC
Confidence 34678999999999888877789999999876642 1111111 22
Q ss_pred eeEEEEeecCCCcEEEEEeCCC--eEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDK--TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
.. ++|.| ++..|+++..++ .|.+++..++............. . ..+..++++|++..+
T Consensus 174 ~~-ia~~~--~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~----~-------~~p~~iav~p~~g~l------ 233 (409)
T 3hrp_A 174 GK-PAVTK--DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTF----S-------GKIGAVALDETEEWL------ 233 (409)
T ss_dssp CB-CEECT--TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTS----C-------SCCCBCEECTTSSEE------
T ss_pred Cc-eeEec--CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchh----c-------CCcEEEEEeCCCCeE------
Confidence 33 88854 477888887765 78888887665433320000000 0 111257888854444
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccce--EEEEeCCC-CCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHI--NSISNNSD-GETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~i~~~~~-~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
+.+..++.|..|+ ........... ....++...- ..++|+|+ +.++++- .++.|+.|+.. .. ..
T Consensus 234 ------yv~d~~~~I~~~d-~~~~~~~~~~~---~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~-g~-~~ 301 (409)
T 3hrp_A 234 ------YFVDSNKNFGRFN-VKTQEVTLIKQ---LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD-GE-CE 301 (409)
T ss_dssp ------EEECTTCEEEEEE-TTTCCEEEEEE---CCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT-CC-EE
T ss_pred ------EEEECCCcEEEEE-CCCCCEEEEec---ccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC-CC-EE
Confidence 3355677888887 33211100000 0011111111 28999996 5555555 78999999987 32 22
Q ss_pred eEeecC-CCcc------cCCcCCeEEEEEcCCCCceEEEEe-CCCeEEEEEcCCCceecccccccccccC-CCCc--ccc
Q 015363 269 NIVDVK-PANM------EDLTEVITSAEFHPTHCNMLAYSS-SKGSIRLIDMRQSALCDTHSKLFEEQEA-PGTR--SFF 337 (408)
Q Consensus 269 ~~~~~~-~~~~------~~~~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~--~~~ 337 (408)
.+.... .... ...-.....++++|+| +++++-. .+++|+.|++.++.. ..+.++.. .... ...
T Consensus 302 ~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~~~~G~v-----~~~~g~~~~~g~~~g~~~ 375 (409)
T 3hrp_A 302 WFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLDILDGYV-----STVAGQVDVASQIDGTPL 375 (409)
T ss_dssp EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEETTTTEE-----EEEEECTTCBSCCCBSTT
T ss_pred EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEECCCCEE-----EEEeCCCCCCCcCCCChh
Confidence 221110 0000 0112347899999999 7888877 789999999877753 23333210 0000 000
Q ss_pred ccccceeEEEEEccCCCEEEEeC-CCeEEEEEC
Q 015363 338 TEIIASISDIKFARNGRHILSRD-YMTLKLWDI 369 (408)
Q Consensus 338 ~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~ 369 (408)
.........++++|+|.++++-. .+.|+.+++
T Consensus 376 ~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 376 EATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred ceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 01124578999999987777765 488887765
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.37 E-value=5.7e-10 Score=95.79 Aligned_cols=238 Identities=7% Similarity=0.020 Sum_probs=140.2
Q ss_pred eEEEEECCC-CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccccee
Q 015363 38 ISAIEFDKS-GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN 116 (408)
Q Consensus 38 V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~ 116 (408)
-.+..|+++ +.++++...++.|..||..++.. ..+. .. ..+.
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~------------------------~~~~-~~------------~~~~ 57 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV------------------------QRVT-MD------------APVS 57 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE------------------------EEEE-CS------------SCEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE------------------------EEEe-CC------------CceE
Confidence 457889996 55667777789999999876542 1111 11 4588
Q ss_pred EEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCc
Q 015363 117 KIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASND 196 (408)
Q Consensus 117 ~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (408)
++++. ++|.++++ . ++.|.+||..+++............ .. .+..+.+.|+|+....-.+....
T Consensus 58 ~i~~~--~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~----~~-------~~~di~~d~dG~l~~~~~~~~~~- 121 (297)
T 3g4e_A 58 SVALR--QSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKK----NN-------RFNDGKVDPAGRYFAGTMAEETA- 121 (297)
T ss_dssp EEEEB--TTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCS----SE-------EEEEEEECTTSCEEEEEEECCSB-
T ss_pred EEEEC--CCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCC----CC-------CCCCEEECCCCCEEEecCCcccc-
Confidence 99995 45775544 4 5689999999887655443321110 01 11257788888854111000000
Q ss_pred cccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCC-CCCcee--eEe
Q 015363 197 SSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLE-ISNQSF--NIV 271 (408)
Q Consensus 197 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~-~~~~~~--~~~ 271 (408)
........-.+|. +... . .... . ..+....+.++|+|+++.|..+ .++.|.+||+. ..+... +.+
T Consensus 122 --~~~~~~~~~~l~~-~d~~-g----~~~~-~-~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~ 191 (297)
T 3g4e_A 122 --PAVLERHQGALYS-LFPD-H----HVKK-Y-FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSV 191 (297)
T ss_dssp --TTBCCTTCEEEEE-ECTT-S----CEEE-E-EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEE
T ss_pred --cccccCCCcEEEE-EECC-C----CEEE-E-eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEE
Confidence 0000112223433 2211 1 1111 1 1222456789999999877655 58899999974 222221 111
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEc-
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFA- 350 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s- 350 (408)
..+..+......++++++| ++.++...++.|.+||..+++.. ..+..+ ...+++++|.
T Consensus 192 ----~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~~~----~~i~~p------------~~~~t~~~f~g 250 (297)
T 3g4e_A 192 ----YKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTGKRL----QTVKLP------------VDKTTSCCFGG 250 (297)
T ss_dssp ----EECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTCCEE----EEEECS------------SSBEEEEEEES
T ss_pred ----EECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCceEE----EEEECC------------CCCceEEEEeC
Confidence 0123334567899999999 88888878889999999888654 344433 2468999998
Q ss_pred cCCCEEEEe
Q 015363 351 RNGRHILSR 359 (408)
Q Consensus 351 pdg~~l~s~ 359 (408)
||++.|+.+
T Consensus 251 ~d~~~L~vt 259 (297)
T 3g4e_A 251 KNYSEMYVT 259 (297)
T ss_dssp GGGCEEEEE
T ss_pred CCCCEEEEE
Confidence 888766543
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.36 E-value=1.1e-10 Score=112.54 Aligned_cols=213 Identities=9% Similarity=0.022 Sum_probs=124.5
Q ss_pred cceeEEEEeecCCCcEEEEE-----eCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 113 EKINKIRWCQSANSALYLLS-----TNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~-----~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
..+..++||| ||++||.+ +.+.+|++||+.+++.... .... .... ..++|+|||+.+
T Consensus 121 ~~~~~~~~SP--DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~------~~~~-------~~~~wspDg~~l- 182 (695)
T 2bkl_A 121 VSLGTWAVSW--DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIE------GGKY-------ATPKWTPDSKGF- 182 (695)
T ss_dssp EEEEEEEECT--TSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBS------CCTT-------CCCEECTTSSEE-
T ss_pred EEEEEEEECC--CCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccC------cccc-------cceEEecCCCEE-
Confidence 4588999975 48888844 4457899999999875310 0100 0000 158999999987
Q ss_pred cccccccCccccCCCCCc-------------eeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cC
Q 015363 188 RNFGCASNDSSFPPGGVS-------------SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DD 253 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~-------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d 253 (408)
+.++.+. .|++|+ +...... ...+.. ...+...+..+.|+|||++|+.+ .+
T Consensus 183 -----------~~~~~d~~~~~~~~~~~~~~~v~~~~-l~t~~~~--~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 183 -----------YYEWLPTDPSIKVDERPGYTTIRYHT-LGTEPSK--DTVVHE-RTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp -----------EEEECCCCTTSCGGGGGGGCEEEEEE-TTSCGGG--CEEEEC-CCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred -----------EEEEecCCCCCccccCCCCCEEEEEE-CCCCchh--ceEEEe-cCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 4444433 388877 4321110 011111 12344578899999999988876 44
Q ss_pred C----eEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe---CCCeEEEEEcCCCceecccccccc
Q 015363 254 L----RINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS---SKGSIRLIDMRQSALCDTHSKLFE 326 (408)
Q Consensus 254 ~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~ 326 (408)
+ .|.+|+... +.... +..+...+....+ +++ .+++... .++.|.+||+.++... ....+.
T Consensus 248 ~~~~~~l~~~~~~~-~~~~~--------l~~~~~~~~~~~~-~~g-~l~~~s~~~~~~~~l~~~d~~~~~~~--~~~~l~ 314 (695)
T 2bkl_A 248 GWSENDVYWKRPGE-KDFRL--------LVKGVGAKYEVHA-WKD-RFYVLTDEGAPRQRVFEVDPAKPARA--SWKEIV 314 (695)
T ss_dssp TTTEEEEEEECTTC-SSCEE--------EEECSSCCEEEEE-ETT-EEEEEECTTCTTCEEEEEBTTBCSGG--GCEEEE
T ss_pred CCCceEEEEEcCCC-CceEE--------eecCCCceEEEEe-cCC-cEEEEECCCCCCCEEEEEeCCCCCcc--CCeEEe
Confidence 4 666666542 22222 2233444555666 788 5444443 2589999999876420 012222
Q ss_pred cccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec
Q 015363 327 EQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 327 ~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
.+.. ...+..++|+ ++.++++.. |+..+||.++..++.++.+..+
T Consensus 315 ~~~~----------~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 315 PEDS----------SASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp CCCS----------SCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCS
T ss_pred cCCC----------CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCC
Confidence 2210 2457888888 667777764 6888887665335656655544
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.28 E-value=1.4e-09 Score=94.74 Aligned_cols=209 Identities=10% Similarity=0.009 Sum_probs=128.4
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
.......++++++++++++...++.|.+||..+++. ...+...... ....
T Consensus 82 ~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-----------------------~~~i~~g~~~-------~~~~ 131 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI-----------------------TGYIECPDMD-------MESG 131 (328)
T ss_dssp CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE-----------------------EEEEECTTCC-------TTTC
T ss_pred CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE-----------------------EEEEEcCCcc-------ccCC
Confidence 346678899999986555544789999999887652 1112111000 0001
Q ss_pred ceeEEEEeecCCCcEEEEEe-CCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 114 KINKIRWCQSANSALYLLST-NDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
....+++ . ++.++++.. .++.|.++|+.+++....+.....+ ..+.+.|+|+..
T Consensus 132 ~p~~i~~--~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p----------------~~i~~~~dG~l~------ 186 (328)
T 3dsm_A 132 STEQMVQ--Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQP----------------TSLVMDKYNKMW------ 186 (328)
T ss_dssp BCCCEEE--E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCB----------------CCCEECTTSEEE------
T ss_pred CcceEEE--E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCc----------------cceEEcCCCCEE------
Confidence 3556777 2 244444433 4899999999999877665443221 157778888765
Q ss_pred ccCccccCCCC----------CceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCC
Q 015363 193 ASNDSSFPPGG----------VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLE 262 (408)
Q Consensus 193 ~~~~~~~~~~~----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~ 262 (408)
++... .+.|.++| .... +..+.+..........++++|+++.|.++.. .|.+||..
T Consensus 187 ------v~~~~~~~~~~~~~~~~~v~~id-~~t~------~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~ 252 (328)
T 3dsm_A 187 ------TITDGGYEGSPYGYEAPSLYRID-AETF------TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVE 252 (328)
T ss_dssp ------EEBCCBCTTCSSCBCCCEEEEEE-TTTT------EEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETT
T ss_pred ------EEECCCccCCccccCCceEEEEE-CCCC------eEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECC
Confidence 33333 36788877 3221 1111221111236789999999999888733 89999998
Q ss_pred CCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEE----eCCCeEEEEEcCCCcee
Q 015363 263 ISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYS----SSKGSIRLIDMRQSALC 318 (408)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~----~~dg~i~iwd~~~~~~~ 318 (408)
+... ... ..+.........++++|++..++++. ..++.|.+||.. ++.+
T Consensus 253 t~~~-~~~-----~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 253 ADRV-PVR-----PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp CSSC-CSS-----CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred CCce-eee-----eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 4432 110 00122245678999999553777776 678999999998 6554
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.27 E-value=3.4e-09 Score=89.44 Aligned_cols=195 Identities=6% Similarity=-0.053 Sum_probs=123.2
Q ss_pred ceeEEEEeecCCCcEEE-EEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 114 KINKIRWCQSANSALYL-LSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
...++++. ++|.+++ +...++.|.+|+..+.......... . ..+..+++.++|...
T Consensus 25 ~p~~i~~~--~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~--------~-------~~p~~i~~~~~g~l~------ 81 (270)
T 1rwi_B 25 SPSGVAVD--SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNG--------L-------YQPQGLAVDGAGTVY------ 81 (270)
T ss_dssp CEEEEEEC--TTCCEEEEECSSSCEEEEECC-----EECCCCS--------C-------CSCCCEEECTTCCEE------
T ss_pred CccceEEC--CCCCEEEEccCCCCcEEEecCCCcccceEeeCC--------c-------CCcceeEECCCCCEE------
Confidence 47889995 4577666 4477899999997665432211110 0 112267888888754
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEe
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~ 271 (408)
++.. ++.|..|+ ..... ...+.......+..++++++++++++. .++.|.+|+.........
T Consensus 82 ------v~~~-~~~i~~~d-~~~~~-------~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-- 144 (270)
T 1rwi_B 82 ------VTDF-NNRVVTLA-AGSNN-------QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL-- 144 (270)
T ss_dssp ------EEET-TTEEEEEC-TTCSC-------CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC--
T ss_pred ------EEcC-CCEEEEEe-CCCce-------EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee--
Confidence 4444 77888877 32211 111111222568899999999988877 788999997653222211
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEcc
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFAR 351 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 351 (408)
.......+..++++|++ +++++...++.|.+||....... ...... ...+..+++++
T Consensus 145 ------~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~----~~~~~~------------~~~p~~i~~d~ 201 (270)
T 1rwi_B 145 ------PFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQV----VLPFTD------------ITAPWGIAVDE 201 (270)
T ss_dssp ------CCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCEE----ECCCSS------------CCSEEEEEECT
T ss_pred ------ccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCceE----eecccC------------CCCceEEEECC
Confidence 11223356789999999 77777777889999998876432 111111 14578899999
Q ss_pred CCCEEEEeC-CCeEEEEECCC
Q 015363 352 NGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 352 dg~~l~s~~-d~~v~~wd~~~ 371 (408)
+|.++++.. ++.|.+|+...
T Consensus 202 ~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 202 AGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp TCCEEEEETTTSCEEEECTTC
T ss_pred CCCEEEEECCCCcEEEEcCCC
Confidence 997777764 58999999864
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.26 E-value=1.7e-08 Score=86.45 Aligned_cols=236 Identities=8% Similarity=0.030 Sum_probs=148.7
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
..+.+++++++|+++++...++.|..||.. +... ...+.... ..+
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~----------------------~~~~~~~~------------~~~ 106 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT----------------------EYPLPQPD------------SGP 106 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE----------------------EEECSSTT------------CCE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE----------------------EecCCCCC------------CCC
Confidence 568899999999977776667889999866 3210 00111111 347
Q ss_pred eEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccC
Q 015363 116 NKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASN 195 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 195 (408)
.++++. ++|.++++...++.|..++.. ++..... .... .... ..+++.++|+..
T Consensus 107 ~~i~~~--~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~------~~~~-------~~i~~d~~g~l~--------- 160 (300)
T 2qc5_A 107 YGITEG--LNGDIWFTQLNGDRIGKLTAD-GTIYEYD-LPNK------GSYP-------AFITLGSDNALW--------- 160 (300)
T ss_dssp EEEEEC--STTCEEEEETTTTEEEEECTT-SCEEEEE-CSST------TCCE-------EEEEECTTSSEE---------
T ss_pred ccceEC--CCCCEEEEccCCCeEEEECCC-CCEEEcc-CCCC------CCCc-------eeEEECCCCCEE---------
Confidence 888885 457777776678899999987 5544322 1100 1112 267788888754
Q ss_pred ccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecC
Q 015363 196 DSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVK 274 (408)
Q Consensus 196 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~ 274 (408)
++...++.|..++ . .. .........+...+..++++++++++++. ..+.|.+||.. .. .... .
T Consensus 161 ---v~~~~~~~i~~~~-~-~g------~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-~~~~-~-- 224 (300)
T 2qc5_A 161 ---FTENQNNSIGRIT-N-TG------KLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GE-ISEY-D-- 224 (300)
T ss_dssp ---EEETTTTEEEEEC-T-TC------CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC-EEEE-E--
T ss_pred ---EEecCCCeEEEEC-C-CC------cEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-Cc-EEEE-E--
Confidence 4445566777776 3 11 11111112334568899999999888877 67889999984 32 2221 1
Q ss_pred CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 275 PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 275 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
...+...+.+++++++| +++++...++.|..||. ++.... ..+... ...+.+++++++|+
T Consensus 225 ---~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~---~~~~~~------------~~~~~~i~~~~~g~ 284 (300)
T 2qc5_A 225 ---IPTPNARPHAITAGKNS-EIWFTEWGANQIGRITN-DNTIQE---YQLQTE------------NAEPHGITFGKDGS 284 (300)
T ss_dssp ---CSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECT-TSCEEE---EECCST------------TCCCCCEEECTTSC
T ss_pred ---CCCCCCCceEEEECCCC-CEEEeccCCCeEEEECC-CCcEEE---EECCcc------------CCccceeEeCCCCC
Confidence 22345568899999999 77777666789999998 343210 111111 14578899999999
Q ss_pred EEEEeCCCeEEEEEC
Q 015363 355 HILSRDYMTLKLWDI 369 (408)
Q Consensus 355 ~l~s~~d~~v~~wd~ 369 (408)
+.++... .|..+|.
T Consensus 285 l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 285 VWFALKC-KIGKLNL 298 (300)
T ss_dssp EEEECSS-EEEEEEE
T ss_pred EEEEccC-ceEEeCC
Confidence 7777654 6766665
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.25 E-value=1.1e-09 Score=97.52 Aligned_cols=258 Identities=10% Similarity=0.084 Sum_probs=145.7
Q ss_pred EEEECCCCCeEEEee----------cCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccC-Ccccccccc
Q 015363 40 AIEFDKSGDHLATGD----------RGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSH-EPEFDYLKS 108 (408)
Q Consensus 40 ~~~~s~~~~~l~sg~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h-~~~~~~~~~ 108 (408)
.++++|||++|+++. .++.|.++|..+.+.. ..+.-. ...+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv-----------------------~~I~v~g~~r~----- 173 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPI-----------------------ADIELPDAPRF----- 173 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE-----------------------EEEEETTCCCC-----
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEE-----------------------EEEECCCcccc-----
Confidence 799999999888876 4678999998876531 111100 0000
Q ss_pred cccccceeEEEEeecCCCcEEEEEeC--CCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTN--DKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
........+.|+ ++|++++++.. ++.|.+.|+.+.+....+...... .+. ......-+.++++|+.+
T Consensus 174 -~~g~~P~~~~~s--pDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~-------~~~-p~g~~~~v~~~~dG~~~ 242 (426)
T 3c75_H 174 -LVGTYQWMNALT--PDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCY-------HIF-PASPTVFYMNCRDGSLA 242 (426)
T ss_dssp -CBSCCGGGSEEC--TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEE-------EEE-EEETTEEEEEETTSSEE
T ss_pred -ccCCCcceEEEc--CCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCce-------eec-cCCCcEEEEEcCCCCEE
Confidence 000124567885 55888888764 689999999999887766542210 000 00001124455555544
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~ 265 (408)
+....++.+.. . .. ..+..........+.+.+++..++.. ..+.|.+.|.....
T Consensus 243 ------------~V~~~~~~v~~-~-~~-----------~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 243 ------------RVDFADGETKV-T-NT-----------EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG 297 (426)
T ss_dssp ------------EEECCTTCCEE-E-EC-----------CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC
T ss_pred ------------EEECCCCcEEE-E-ee-----------eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc
Confidence 21112222221 0 00 00000000111134678888776665 77899999987332
Q ss_pred ce-eeEeecCC-Cccc--CCcCCeEEEEEcCCCCceEEEEeC---------CCeEEEEEcCCCceecccccccccccCCC
Q 015363 266 QS-FNIVDVKP-ANME--DLTEVITSAEFHPTHCNMLAYSSS---------KGSIRLIDMRQSALCDTHSKLFEEQEAPG 332 (408)
Q Consensus 266 ~~-~~~~~~~~-~~~~--~~~~~v~~~~~~p~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 332 (408)
.. ...+.+.. .... ........++++|++.+++++... ++.|.+.|+.+.+.+ ..+...
T Consensus 298 ~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv----~~I~vg---- 369 (426)
T 3c75_H 298 ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI----NKIELG---- 369 (426)
T ss_dssp EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE----EEEEEE----
T ss_pred eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE----EEEECC----
Confidence 11 11111100 0000 011112237899998444444331 357999999999765 444433
Q ss_pred CccccccccceeEEEEEccCCC-EEEEeC--CCeEEEEECCCCCCceeee
Q 015363 333 TRSFFTEIIASISDIKFARNGR-HILSRD--YMTLKLWDINMDSGPVATF 379 (408)
Q Consensus 333 ~~~~~~~h~~~i~~~~~spdg~-~l~s~~--d~~v~~wd~~~~~~~~~~~ 379 (408)
.....+.|+|||+ +|+++. ++.|.++|+.+ ++.++++
T Consensus 370 ---------~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t-~kvv~tI 409 (426)
T 3c75_H 370 ---------HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT-GEELRSV 409 (426)
T ss_dssp ---------EEECEEEECCSSSCEEEEEETTTTEEEEEETTT-CCEEEEE
T ss_pred ---------CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC-CCEEEEe
Confidence 3478899999999 888774 59999999998 7888887
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.22 E-value=2.4e-08 Score=86.78 Aligned_cols=227 Identities=11% Similarity=-0.003 Sum_probs=135.4
Q ss_pred eEEEEECCC-CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccccee
Q 015363 38 ISAIEFDKS-GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN 116 (408)
Q Consensus 38 V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~ 116 (408)
..++.|+|+ +.++++...++.|..|+..++.. ..+. .. ..+.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~------------------------~~~~-~~------------~~v~ 93 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK------------------------TVHA-LP------------FMGS 93 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE------------------------EEEE-CS------------SCEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE------------------------EEEE-CC------------Ccce
Confidence 457889997 55667777788999999876532 1111 11 4588
Q ss_pred EEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCc
Q 015363 117 KIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASND 196 (408)
Q Consensus 117 ~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (408)
+++|.|+ |.++++ +.+ .|.+||..+++........... +...+. .+.+.|+|+..
T Consensus 94 ~i~~~~d--g~l~v~-~~~-gl~~~d~~~g~~~~~~~~~~~~----~~~~~~-------~i~~d~~G~l~---------- 148 (326)
T 2ghs_A 94 ALAKISD--SKQLIA-SDD-GLFLRDTATGVLTLHAELESDL----PGNRSN-------DGRMHPSGALW---------- 148 (326)
T ss_dssp EEEEEET--TEEEEE-ETT-EEEEEETTTCCEEEEECSSTTC----TTEEEE-------EEEECTTSCEE----------
T ss_pred EEEEeCC--CeEEEE-ECC-CEEEEECCCCcEEEEeeCCCCC----CCCCCC-------CEEECCCCCEE----------
Confidence 9999765 766554 444 4999999888765543321100 011122 57888888754
Q ss_pred cccCCC----CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCC-CCC-ce-
Q 015363 197 SSFPPG----GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLE-ISN-QS- 267 (408)
Q Consensus 197 ~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~-~~~-~~- 267 (408)
++.. ......+|. +. +. .. ..+ ..+....+.++|+|+++.++.+ .++.|.+||+. ..+ ..
T Consensus 149 --v~~~~~~~~~~~~~l~~-~~--~g----~~-~~~-~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~ 217 (326)
T 2ghs_A 149 --IGTMGRKAETGAGSIYH-VA--KG----KV-TKL-FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG 217 (326)
T ss_dssp --EEEEETTCCTTCEEEEE-EE--TT----EE-EEE-EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS
T ss_pred --EEeCCCcCCCCceEEEE-Ee--CC----cE-EEe-eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc
Confidence 2211 112334554 32 11 11 111 1222346789999999877655 57899999985 122 11
Q ss_pred -eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEE
Q 015363 268 -FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 268 -~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
...+. .+......+..++++++| .++++...++.|.+||. +++.. ..+..+ ...+.+
T Consensus 218 ~~~~~~----~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~-~g~~~----~~i~~~------------~~~~~~ 275 (326)
T 2ghs_A 218 KAEVFI----DSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDT-DGNHI----ARYEVP------------GKQTTC 275 (326)
T ss_dssp CCEEEE----ECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECT-TCCEE----EEEECS------------CSBEEE
T ss_pred CceEEE----ECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECC-CCCEE----EEEECC------------CCCcEE
Confidence 11110 122233456789999999 77777767789999998 45433 333333 246899
Q ss_pred EEEc-cCCCEEEEe
Q 015363 347 IKFA-RNGRHILSR 359 (408)
Q Consensus 347 ~~~s-pdg~~l~s~ 359 (408)
++|+ |++..|+.+
T Consensus 276 ~af~g~d~~~L~vt 289 (326)
T 2ghs_A 276 PAFIGPDASRLLVT 289 (326)
T ss_dssp EEEESTTSCEEEEE
T ss_pred EEEecCCCCEEEEE
Confidence 9998 888766544
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.22 E-value=1e-08 Score=88.29 Aligned_cols=250 Identities=9% Similarity=-0.015 Sum_probs=139.0
Q ss_pred eeccceEEEEECCCCC-eEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccc
Q 015363 33 QEVDIISAIEFDKSGD-HLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEI 111 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~ 111 (408)
..........|+|+|+ +++++..++.|..|+.. +.. ..+..+.
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~------------------------~~~~~~~----------- 85 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV------------------------DVLLDAT----------- 85 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE------------------------EEEEESC-----------
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE------------------------EEEeCCC-----------
Confidence 3455677899999998 67777788999999863 321 1233233
Q ss_pred ccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc-
Q 015363 112 EEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF- 190 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~- 190 (408)
..+..+++. ++|.++++...++.|.+|+.. ++........... ....+..+.+.++|....+-.
T Consensus 86 -~~~~gl~~d--~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~-----------~~~~~~~i~~d~dG~l~~td~~ 150 (305)
T 3dr2_A 86 -AFTNGNAVD--AQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGK-----------RLNSPNDLIVARDGAIWFTDPP 150 (305)
T ss_dssp -SCEEEEEEC--TTSCEEEEETTTTEEEEECTT-SCEEEEECEETTE-----------ECSCCCCEEECTTSCEEEECCS
T ss_pred -CccceeeEC--CCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCC-----------ccCCCCCEEECCCCCEEEeCcC
Confidence 448889995 558766665566899999986 5543332211100 001122577888887651100
Q ss_pred -cccc---CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cC------CeEEEE
Q 015363 191 -GCAS---NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DD------LRINLW 259 (408)
Q Consensus 191 -~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d------~~i~iw 259 (408)
+... ..........+.|..++ ...... ..+ . .....+.++|+|+++.|+.+ .. +.|.+|
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~v~~~d-~~~g~~-------~~~-~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~ 220 (305)
T 3dr2_A 151 FGLRKPSQGCPADPELAHHSVYRLP-PDGSPL-------QRM-A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF 220 (305)
T ss_dssp GGGSCGGGSCCCCCSSSCEEEEEEC-SSSCCC-------EEE-E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEE
T ss_pred CCccccccccccccccCCCeEEEEc-CCCCcE-------EEE-e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE
Confidence 0000 00000001124455544 211111 111 1 22456789999999977776 43 789999
Q ss_pred eCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccc
Q 015363 260 NLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTE 339 (408)
Q Consensus 260 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (408)
++.... ......+ ..........++++++| ++.++ ..+ .|.+|+.. ++.. ..+..+
T Consensus 221 ~~~~~~-l~~~~~~----~~~~~~~pdgi~~d~~G-~lwv~-~~~-gv~~~~~~-g~~~----~~~~~~----------- 276 (305)
T 3dr2_A 221 AWRDGA-LHDRRHF----ASVPDGLPDGFCVDRGG-WLWSS-SGT-GVCVFDSD-GQLL----GHIPTP----------- 276 (305)
T ss_dssp EEETTE-EEEEEEE----ECCSSSCCCSEEECTTS-CEEEC-CSS-EEEEECTT-SCEE----EEEECS-----------
T ss_pred EecCCC-ccCCeEE----EECCCCCCCeEEECCCC-CEEEe-cCC-cEEEECCC-CCEE----EEEECC-----------
Confidence 987432 1110000 11122334578999999 65444 344 59999984 4332 333333
Q ss_pred ccceeEEEEEccCCCEEEEeCCCeEEEEEC
Q 015363 340 IIASISDIKFARNGRHILSRDYMTLKLWDI 369 (408)
Q Consensus 340 h~~~i~~~~~spdg~~l~s~~d~~v~~wd~ 369 (408)
..+..++|+|+++.|+.++.+.+..+++
T Consensus 277 --~~~~~~~f~~d~~~L~it~~~~l~~~~~ 304 (305)
T 3dr2_A 277 --GTASNCTFDQAQQRLFITGGPCLWMLPL 304 (305)
T ss_dssp --SCCCEEEECTTSCEEEEEETTEEEEEEC
T ss_pred --CceeEEEEeCCCCEEEEEcCCeEEEEEC
Confidence 2477899999998887775545544443
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.20 E-value=4.3e-09 Score=102.24 Aligned_cols=221 Identities=11% Similarity=0.039 Sum_probs=120.1
Q ss_pred cceeEEEEeecCCCcEEEEEeCC-----CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 113 EKINKIRWCQSANSALYLLSTND-----KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
..+..++|+| ||++||.++.+ ..|++||+.+++......... ....++|+|| +.+.
T Consensus 163 ~~~~~~~~SP--DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~----------------~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 163 TALDAWAASD--DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV----------------KFSGLAWLGN-DALL 223 (741)
T ss_dssp EEEEEEEECT--TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE----------------ESCCCEESTT-SEEE
T ss_pred EEEEeEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc----------------eeccEEEECC-CEEE
Confidence 3588899975 48899887643 469999999998754311100 0015789999 7762
Q ss_pred cccccccC--ccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cC-----CeEEEE
Q 015363 188 RNFGCASN--DSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DD-----LRINLW 259 (408)
Q Consensus 188 ~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d-----~~i~iw 259 (408)
........ ..+........|++|+ +..... ....+.. ...+...+..+.|+|||++|+.. .+ ..|++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~v~~~~-lgt~~~--~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~ 299 (741)
T 1yr2_A 224 YSRFAEPKEGQAFQALNYNQTVWLHR-LGTPQS--ADQPVFA-TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVA 299 (741)
T ss_dssp EEECCCC--------CCCCCEEEEEE-TTSCGG--GCEEEEC-CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEE
T ss_pred EEEecCcccccccccCCCCCEEEEEE-CCCCch--hCEEEec-cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEE
Confidence 11100000 0000000123466666 321110 0011111 02233357899999999988875 43 389999
Q ss_pred eCCCCCce-eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeC----CCeEEEEEcCCCc-eecccccccccccCCCC
Q 015363 260 NLEISNQS-FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSS----KGSIRLIDMRQSA-LCDTHSKLFEEQEAPGT 333 (408)
Q Consensus 260 d~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~ 333 (408)
|+.++... ... +..+...+... ++|++ ..|+..+. ++.|.+||+.++. .. ...+..+
T Consensus 300 d~~~~~~~~~~~-------l~~~~~~~~~~-~~~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~---~~l~~~~----- 362 (741)
T 1yr2_A 300 RVTNGKIGPVTA-------LIPDLKAQWDF-VDGVG-DQLWFVSGDGAPLKKIVRVDLSGSTPRF---DTVVPES----- 362 (741)
T ss_dssp EEETTEECCCEE-------EECSSSSCEEE-EEEET-TEEEEEECTTCTTCEEEEEECSSSSCEE---EEEECCC-----
T ss_pred ECCCCCCcccEE-------ecCCCCceEEE-EeccC-CEEEEEECCCCCCCEEEEEeCCCCcccc---EEEecCC-----
Confidence 99844211 222 22233334444 34888 66666665 3569999988742 11 0222222
Q ss_pred ccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeee
Q 015363 334 RSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQV 381 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~ 381 (408)
...+..++|+ ++.++++.. ++..+||.++..+..++.+..
T Consensus 363 -------~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~ 403 (741)
T 1yr2_A 363 -------KDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL 403 (741)
T ss_dssp -------SSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC
T ss_pred -------CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC
Confidence 2456778887 556666664 677777765533565665554
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.15 E-value=3.3e-08 Score=84.71 Aligned_cols=214 Identities=12% Similarity=0.108 Sum_probs=129.4
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
.-+..|+|. ++.++++...++.|..||..+++... .... ..+. .+++.++|+.+
T Consensus 15 ~Egp~w~~~-~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~~---------~~~~-------~i~~~~dG~l~-------- 68 (297)
T 3g4e_A 15 GESPVWEEV-SNSLLFVDIPAKKVCRWDSFTKQVQR-VTMD---------APVS-------SVALRQSGGYV-------- 68 (297)
T ss_dssp EEEEEEETT-TTEEEEEETTTTEEEEEETTTCCEEE-EECS---------SCEE-------EEEEBTTSSEE--------
T ss_pred ccCCeEECC-CCEEEEEECCCCEEEEEECCCCcEEE-EeCC---------CceE-------EEEECCCCCEE--------
Confidence 557889753 34566666788999999999876532 2221 1222 68889999854
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cC---------CeEEEEeCCCC
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DD---------LRINLWNLEIS 264 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d---------~~i~iwd~~~~ 264 (408)
++ . +..|.+|| .......... ..........++.++++|+|+++++. .. ..-.+|.+...
T Consensus 69 ----v~-~-~~~l~~~d-~~~g~~~~~~---~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~ 138 (297)
T 3g4e_A 69 ----AT-I-GTKFCALN-WKEQSAVVLA---TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD 138 (297)
T ss_dssp ----EE-E-TTEEEEEE-TTTTEEEEEE---ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT
T ss_pred ----EE-E-CCeEEEEE-CCCCcEEEEE---ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC
Confidence 33 2 45677776 3221110000 00001123458899999999988765 32 23455555433
Q ss_pred CceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEc--CCCceec-ccccccccccCCCCcccccccc
Q 015363 265 NQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDM--RQSALCD-THSKLFEEQEAPGTRSFFTEII 341 (408)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~ 341 (408)
+..... ..+......++|+|++..++++.+.++.|.+|++ .++.... +.+..+.. +.
T Consensus 139 g~~~~~--------~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~------------~~ 198 (297)
T 3g4e_A 139 HHVKKY--------FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK------------EE 198 (297)
T ss_dssp SCEEEE--------EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG------------GG
T ss_pred CCEEEE--------eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC------------CC
Confidence 333222 1123446789999999334456666899999997 4443211 01111111 12
Q ss_pred ceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecccc
Q 015363 342 ASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 342 ~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
..+..++++++|++.++.. .+.|..||.++ ++.+..+..+...
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t-G~~~~~i~~p~~~ 242 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVT-GKRLQTVKLPVDK 242 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTT-CCEEEEEECSSSB
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCC-ceEEEEEECCCCC
Confidence 4678899999998777774 58899999986 7888888776433
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.15 E-value=4.8e-09 Score=100.99 Aligned_cols=244 Identities=11% Similarity=0.102 Sum_probs=141.7
Q ss_pred eccceEEEEECCCCCeEEEe-----ecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccc
Q 015363 34 EVDIISAIEFDKSGDHLATG-----DRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKS 108 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg-----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~ 108 (408)
|...|..++|||||++||.+ +....|++||+.+++.. ...+. .
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~----------------------~~~~~--~-------- 174 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL----------------------ETPLK--D-------- 174 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE----------------------EEEEE--E--------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC----------------------ccccC--C--------
Confidence 55678999999999998853 33357999999887631 00011 0
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCC-------------eEEEEEcCCCcE--EEEeccCC-CCcccCCCCCeEeecC
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDK-------------TIKLWKVQEKKV--KKVFDWNV-HPEKAAGNGPIFGSHV 172 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~-------------~i~vwd~~~~~~--~~~~~~~~-~~~~~~~~~~v~~~~~ 172 (408)
.+...++|+ + |+.|+.++.+. .|++|++.+... ..+..... ++ ....
T Consensus 175 ----~k~~~~~Ws-D--g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~------~~~~---- 237 (693)
T 3iuj_A 175 ----VKFSGISWL-G--NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH------HRYV---- 237 (693)
T ss_dssp ----EESCCCEEE-T--TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGC------CSEE----
T ss_pred ----ceeccEEEe-C--CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCC------eEEE----
Confidence 113578896 4 77888887764 399999887643 33333322 11 1122
Q ss_pred CceeeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEE-Ee
Q 015363 173 SAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFI-SA 251 (408)
Q Consensus 173 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~ 251 (408)
.+.++|||+.+.... ..+.....|.+++ +...+. ..+.+ ..+....... +++++..|+ .+
T Consensus 238 ---~~~~SpDg~~l~~~~--------~~~~~~~~i~~~d-~~~~~~-----~~~~l-~~~~~~~~~~-~~~~g~~l~~~t 298 (693)
T 3iuj_A 238 ---GATVTEDDRFLLISA--------ANSTSGNRLYVKD-LSQENA-----PLLTV-QGDLDADVSL-VDNKGSTLYLLT 298 (693)
T ss_dssp ---EEEECTTSCEEEEEE--------ESSSSCCEEEEEE-TTSTTC-----CCEEE-ECSSSSCEEE-EEEETTEEEEEE
T ss_pred ---EEEEcCCCCEEEEEE--------ccCCCCcEEEEEE-CCCCCC-----ceEEE-eCCCCceEEE-EeccCCEEEEEE
Confidence 578999999872100 1122345778777 432211 11222 3333334443 556665554 44
Q ss_pred -c---CCeEEEEeCCCCCc-eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe-CCC--eEEEEEcCCCceeccccc
Q 015363 252 -D---DLRINLWNLEISNQ-SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS-SKG--SIRLIDMRQSALCDTHSK 323 (408)
Q Consensus 252 -~---d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg--~i~iwd~~~~~~~~~~~~ 323 (408)
. .+.|..+|+..... ..+. +..|...+. .|++++ ..|+... .++ .|++||+..+.. .
T Consensus 299 ~~~~~~~~l~~~d~~~~~~~~~~~-------l~~~~~~~~--~~s~~g-~~lv~~~~~~g~~~l~~~d~~g~~~-----~ 363 (693)
T 3iuj_A 299 NRDAPNRRLVTVDAANPGPAHWRD-------LIPERQQVL--TVHSGS-GYLFAEYMVDATARVEQFDYEGKRV-----R 363 (693)
T ss_dssp CTTCTTCEEEEEETTSCCGGGCEE-------EECCCSSCE--EEEEET-TEEEEEEEETTEEEEEEECTTSCEE-----E
T ss_pred CCCCCCCEEEEEeCCCCCccccEE-------EecCCCCEE--EEEEEC-CEEEEEEEECCeeEEEEEECCCCee-----E
Confidence 3 36899999985432 1121 233444444 889998 5555554 454 688999875432 2
Q ss_pred ccccccCCCCccccccccceeEEEEEccCCCEEEEe-CC----CeEEEEECCC
Q 015363 324 LFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-DY----MTLKLWDINM 371 (408)
Q Consensus 324 ~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~d----~~v~~wd~~~ 371 (408)
.+.... .+.+..+.++|++..|+.. ++ ++|..||+.+
T Consensus 364 ~l~~p~-----------~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 364 EVALPG-----------LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EECCSS-----------SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred EeecCC-----------CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 222111 2457778888888765543 22 8999999976
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=2.6e-08 Score=89.28 Aligned_cols=223 Identities=11% Similarity=0.060 Sum_probs=131.2
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
.....|+|. +++.++++...++.|++||..++........... + .++++++++.+
T Consensus 131 ~~P~~la~d--~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~----------------~-~ia~~~~g~~l------ 185 (409)
T 3hrp_A 131 KYMWGIAAV--GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG----------------G-KPAVTKDKQRV------ 185 (409)
T ss_dssp CCEEEEEEC--STTEEEEEETTTTEEEEEETTTTEEEEEEETCCB----------------C-BCEECTTSSEE------
T ss_pred CCceEEEEe--CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC----------------C-ceeEecCCCcE------
Confidence 357789995 4577777777789999999998877665443211 1 37888999876
Q ss_pred ccCccccCCCCCc--eeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 193 ASNDSSFPPGGVS--SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 193 ~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
+.+..++ .|..++ ...... ..............+.+++++|++..|..+ .++.|+.||..... ...
T Consensus 186 ------~~~d~~~~~~I~~~d-~~~~~~---~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~-~~~ 254 (409)
T 3hrp_A 186 ------YSIGWEGTHTVYVYM-KASGWA---PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE-VTL 254 (409)
T ss_dssp ------EEEBSSTTCEEEEEE-GGGTTC---EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC-EEE
T ss_pred ------EEEecCCCceEEEEE-cCCCce---eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC-EEE
Confidence 5555544 666666 221110 000000001133567889999954445446 78899999998443 211
Q ss_pred EeecCCCcccCCcCCe-E-EEEEcCCCCceEEEEeCCCeEEEEEcCCCceeccccccccccc-CCCCcc--cccccccee
Q 015363 270 IVDVKPANMEDLTEVI-T-SAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQE-APGTRS--FFTEIIASI 344 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v-~-~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~h~~~i 344 (408)
.... ...++...- . .++|+|++..++++-..++.|+.|+.... . ..+.++. ...... .........
T Consensus 255 ~~~~---~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~-----~~~~g~~~~~g~~dg~~~~~~~~~P 325 (409)
T 3hrp_A 255 IKQL---ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-C-----EWFCGSATQKTVQDGLREEALFAQP 325 (409)
T ss_dssp EEEC---CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-E-----EEEEECTTCCSCBCEEGGGCBCSSE
T ss_pred Eecc---cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-E-----EEEEeCCCCCCcCCCcccccEeCCC
Confidence 1000 011112221 3 89999954277777777899999997643 1 2222221 000000 000011347
Q ss_pred EEEEEccCCCEEEEeC-C-CeEEEEECCCCCCceeeeeec
Q 015363 345 SDIKFARNGRHILSRD-Y-MTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 345 ~~~~~spdg~~l~s~~-d-~~v~~wd~~~~~~~~~~~~~~ 382 (408)
..++++|+|+++++-. . +.|+.|++.+ + .+.++.++
T Consensus 326 ~gia~d~dG~lyvad~~~~~~I~~~~~~~-G-~v~~~~g~ 363 (409)
T 3hrp_A 326 NGMTVDEDGNFYIVDGFKGYCLRKLDILD-G-YVSTVAGQ 363 (409)
T ss_dssp EEEEECTTCCEEEEETTTTCEEEEEETTT-T-EEEEEEEC
T ss_pred eEEEEeCCCCEEEEeCCCCCEEEEEECCC-C-EEEEEeCC
Confidence 8999999999777765 4 8999999764 4 35666555
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.10 E-value=3.4e-08 Score=85.24 Aligned_cols=208 Identities=6% Similarity=-0.001 Sum_probs=125.2
Q ss_pred eccceEEEEECCC-CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeee-ccCCccccccccccc
Q 015363 34 EVDIISAIEFDKS-GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEF-QSHEPEFDYLKSLEI 111 (408)
Q Consensus 34 h~~~V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~h~~~~~~~~~~~~ 111 (408)
+...+.+++++++ |+++++.. .+.|.+|+.+ ++.. .+ ...... ..
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~------------------------~~~~~~~~~-------~~ 115 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFE------------------------EIAKKDSEG-------RR 115 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEE------------------------ECCSBCTTS-------CB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEE------------------------EEEeccCCC-------cc
Confidence 4567899999999 77555544 4478889976 4321 11 000000 00
Q ss_pred ccceeEEEEeecCCCcEEEEEeCC---------------CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCcee
Q 015363 112 EEKINKIRWCQSANSALYLLSTND---------------KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIP 176 (408)
Q Consensus 112 ~~~v~~v~~~p~~~~~~l~~~~~d---------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (408)
...+.++++. ++|.++++...+ +.|..|+.. ++........ ..+..
T Consensus 116 ~~~~~~i~~d--~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----------------~~~~~ 176 (314)
T 1pjx_A 116 MQGCNDCAFD--YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF----------------QFPNG 176 (314)
T ss_dssp CBCCCEEEEC--TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE----------------SSEEE
T ss_pred ccCCcCEEEC--CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC----------------CCcce
Confidence 0347889995 558777766554 567777765 5443322111 11125
Q ss_pred eEEc----cCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccc-cceEEEEeCCCCCEEEEe
Q 015363 177 KSYM----ANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHD-YHINSISNNSDGETFISA 251 (408)
Q Consensus 177 ~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~~~ 251 (408)
++++ ++++.+ +++...++.|.+|+ ............... ...+. ..+..++++++|+++++.
T Consensus 177 i~~~~~~d~dg~~l-----------~v~~~~~~~i~~~~-~~~~g~~~~~~~~~~-~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 177 IAVRHMNDGRPYQL-----------IVAETPTKKLWSYD-IKGPAKIENKKVWGH-IPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EEEEECTTSCEEEE-----------EEEETTTTEEEEEE-EEETTEEEEEEEEEE-CCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred EEEecccCCCCCEE-----------EEEECCCCeEEEEE-CCCCCccccceEEEE-CCCCCCCCCCceEECCCCCEEEEE
Confidence 7788 888654 24445678899888 431111000011111 12333 557889999999988887
Q ss_pred -cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCc-eEEEEeCCCeEEEEEcCCC
Q 015363 252 -DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN-MLAYSSSKGSIRLIDMRQS 315 (408)
Q Consensus 252 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg~i~iwd~~~~ 315 (408)
.++.|.+||.++.. .... +..+...+.+++|+|++ + ++++...++.|..|++...
T Consensus 244 ~~~~~i~~~d~~~g~-~~~~-------~~~~~~~~~~i~~~~dg-~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQ-PKMR-------IRCPFEKPSNLHFKPQT-KTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp ETTTEEEEECTTCBS-CSEE-------EECSSSCEEEEEECTTS-SEEEEEETTTTEEEEEECSSC
T ss_pred cCCCEEEEEcCCCCc-EeEE-------EeCCCCCceeEEECCCC-CEEEEEeCCCCeEEEEeCCCC
Confidence 78999999987333 3332 22234678999999999 6 5555556789999998754
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.10 E-value=1e-08 Score=89.71 Aligned_cols=78 Identities=6% Similarity=0.037 Sum_probs=56.5
Q ss_pred EEEcCCCCceEEEE-e---C-----CCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC-EEE
Q 015363 288 AEFHPTHCNMLAYS-S---S-----KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR-HIL 357 (408)
Q Consensus 288 ~~~~p~~~~~l~s~-~---~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~-~l~ 357 (408)
+.++|++ ..++.+ . . ++.+.++|+.+.+.+ ..+... .....++|+|||+ .++
T Consensus 269 v~~s~dg-~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv----~~i~vg-------------~~p~gi~~s~Dg~~l~v 330 (368)
T 1mda_H 269 VAKLKNT-DGIMILTVEHSRSCLAAAENTSSVTASVGQTS----GPISNG-------------HDSDAIIAAQDGASDNY 330 (368)
T ss_dssp EEEETTT-TEEEEEEEECSSCTTSCEEEEEEEESSSCCEE----ECCEEE-------------EEECEEEECCSSSCEEE
T ss_pred eEEcCCC-CEEEEEeccccCcccccCCCEEEEECCCCeEE----EEEECC-------------CCcceEEECCCCCEEEE
Confidence 6899999 555443 3 2 235669999998765 444433 3578899999998 445
Q ss_pred EeC--CCeEEEEECCCCCCceeeeeeccc
Q 015363 358 SRD--YMTLKLWDINMDSGPVATFQVHEH 384 (408)
Q Consensus 358 s~~--d~~v~~wd~~~~~~~~~~~~~~~~ 384 (408)
+.. ++.|.++|+.+ ++.++++.....
T Consensus 331 a~~~~~~~VsVID~~t-~kvv~~I~vg~~ 358 (368)
T 1mda_H 331 ANSAGTEVLDIYDAAS-DQDQSSVELDKG 358 (368)
T ss_dssp EEETTTTEEEEEESSS-CEEEEECCCCSC
T ss_pred EccCCCCeEEEEECCC-CcEEEEEECCCC
Confidence 544 69999999998 788888876544
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.09 E-value=3.4e-09 Score=93.01 Aligned_cols=170 Identities=8% Similarity=0.021 Sum_probs=111.3
Q ss_pred eeEEccCCCeeecccccccCccccCCCCCceeeeceeeecccc-----ccccccceeeccccccceEEEEeCCCCCEEEE
Q 015363 176 PKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQET-----NLVAGCRRIYAHAHDYHINSISNNSDGETFIS 250 (408)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~ 250 (408)
.+++++....+ ++++.++ +.+|+ ...... ....++.. ...+.. |+.++| ++++|++
T Consensus 42 lLais~~~gll------------~a~~~~~-l~v~~-~~~l~~~~~~~~~~~~~~~--~~~lp~-V~~l~f--d~~~L~v 102 (388)
T 1xip_A 42 NLDISNSKSLF------------VAASGSK-AVVGE-LQLLRDHITSDSTPLTFKW--EKEIPD-VIFVCF--HGDQVLV 102 (388)
T ss_dssp CEEEETTTTEE------------EEEETTE-EEEEE-HHHHHHHHHSSSCCCCCSE--EEECTT-EEEEEE--ETTEEEE
T ss_pred EEEEcCCCCEE------------EEeCCCE-EEEEE-hhHhhhhhccccccccceE--EeeCCC-eeEEEE--CCCEEEE
Confidence 57888888886 7777764 44487 433220 00011111 123455 999999 9999999
Q ss_pred ecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccC
Q 015363 251 ADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA 330 (408)
Q Consensus 251 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 330 (408)
+.++.|++||++...+... ...|...+.++.+.+. + +++++.||.|.+||+..+... . +
T Consensus 103 ~~~~~l~v~dv~sl~~~~~--------~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~~----~----~-- 161 (388)
T 1xip_A 103 STRNALYSLDLEELSEFRT--------VTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKSTK----Q----L-- 161 (388)
T ss_dssp EESSEEEEEESSSTTCEEE--------EEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCEE----E----E--
T ss_pred EcCCcEEEEEchhhhccCc--------cceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCccc----c----c--
Confidence 9889999999985553322 2335566777776644 3 888899999999999977542 1 1
Q ss_pred CCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCc--eeeee---------ecccccceEEecCCCee
Q 015363 331 PGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGP--VATFQ---------VHEHLRPKVMHSSKNYF 397 (408)
Q Consensus 331 ~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~ 397 (408)
...|++++|||+| ..+.+.||.+++|+.+. +.. .+++. +|......+..+.+..+
T Consensus 162 ----------~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 162 ----------AQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF 227 (388)
T ss_dssp ----------EESEEEEEECSSE-EEEEETTSCEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred ----------cCCceEEEEcCCc-eEEEEcCCcEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence 2579999999999 34444689999998875 343 44552 24444555554544443
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.05 E-value=3.5e-08 Score=86.43 Aligned_cols=240 Identities=10% Similarity=0.047 Sum_probs=137.5
Q ss_pred eeccceEEEEECCCCCeEEEeec-----CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccc
Q 015363 33 QEVDIISAIEFDKSGDHLATGDR-----GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLK 107 (408)
Q Consensus 33 ~h~~~V~~~~~s~~~~~l~sg~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~ 107 (408)
.|...+..++++++|+++++-.. ++.|.+||..+++. +..+.-....
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~-----------------------~~~~~~~~~~----- 115 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQL-----------------------SRVIYLPPPI----- 115 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEE-----------------------EEEEECCTTT-----
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeE-----------------------EEEEECChhh-----
Confidence 46678999999999987666543 57899999886642 1111111000
Q ss_pred ccccccceeEEEEeecCCCcEEEEEe---CCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCC
Q 015363 108 SLEIEEKINKIRWCQSANSALYLLST---NDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGG 184 (408)
Q Consensus 108 ~~~~~~~v~~v~~~p~~~~~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 184 (408)
......+..+++.|. ++..+++-. .++.|.+||+.+++.......+.... +. ...+.++|.
T Consensus 116 -~~~~~~~~~v~vd~~-~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~---~~-----------~~~~~~~g~ 179 (343)
T 2qe8_A 116 -TLSNSFVNDLAVDLI-HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA---PE-----------DIDLVIDGV 179 (343)
T ss_dssp -SCTTCCCCEEEEETT-TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS---CC-----------SCCCEETTE
T ss_pred -cccccccceEEEecC-CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc---cc-----------ccceeECCE
Confidence 000134688999643 244445544 67899999999888766553321100 00 012233444
Q ss_pred eeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-c-CCeEEEEeCC
Q 015363 185 CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-D-DLRINLWNLE 262 (408)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~-d~~i~iwd~~ 262 (408)
.+ .+...++.++.|. ..++.|+|+|+++.|+.+ . ...+..++..
T Consensus 180 ~~------------~~~~~~g~~~~~~----------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 180 PV------------QIGQPDGTVIRPH----------------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EC------------BEECTTSCEECCC----------------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred EE------------EeccCCCceecee----------------------cccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 33 3334445444443 236789999999988877 4 4455555532
Q ss_pred C--CCce--eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccc
Q 015363 263 I--SNQS--FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFT 338 (408)
Q Consensus 263 ~--~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (408)
. .... .+.. ......++......++++++| .++++...++.|.+||..+++.. .+....
T Consensus 226 ~~~~~~~~~~~~~--~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~~-----~~~~~~--------- 288 (343)
T 2qe8_A 226 DLSNLQLTDAELG--SKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSADRAYK-----LLVTDE--------- 288 (343)
T ss_dssp HHTCTTCCHHHHH--TTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEEE-----EEEECG---------
T ss_pred HhcCCCCChhhhh--cceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCCCCEE-----EEEECC---------
Confidence 1 0000 0000 000011223345679999999 89998888999999998555421 111110
Q ss_pred cccceeEEEEEccCCCEEEEeCC-CeEEEEE
Q 015363 339 EIIASISDIKFARNGRHILSRDY-MTLKLWD 368 (408)
Q Consensus 339 ~h~~~i~~~~~spdg~~l~s~~d-~~v~~wd 368 (408)
+...+.+++|.++|+++++.+. +.+.+|.
T Consensus 289 -~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 289 -KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp -GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred -ceecCCeeEECCCCcEEEEeCccccccccc
Confidence 1246889999999988887753 4444443
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.00 E-value=1.2e-07 Score=81.63 Aligned_cols=212 Identities=13% Similarity=0.073 Sum_probs=123.6
Q ss_pred cceeEEEEeecCCCc-EEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 113 EKINKIRWCQSANSA-LYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
.......|.|+ |. ++++...++.|..|+. +++........ +.+ ..+++.++|+.+
T Consensus 45 ~~~egp~~~~~--g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~---------~~~-------~gl~~d~dG~l~----- 100 (305)
T 3dr2_A 45 TWSEGPAWWEA--QRTLVWSDLVGRRVLGWRE-DGTVDVLLDAT---------AFT-------NGNAVDAQQRLV----- 100 (305)
T ss_dssp SSEEEEEEEGG--GTEEEEEETTTTEEEEEET-TSCEEEEEESC---------SCE-------EEEEECTTSCEE-----
T ss_pred cCccCCeEeCC--CCEEEEEECCCCEEEEEeC-CCCEEEEeCCC---------Ccc-------ceeeECCCCCEE-----
Confidence 33678899765 66 5666678899999998 45433222111 112 267889999865
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEE----e-c-------------C
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFIS----A-D-------------D 253 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~----~-~-------------d 253 (408)
++...++.|..|+ ... ... .............++.++++|+|+++++ | . .
T Consensus 101 -------v~~~~~~~v~~~~-~~g-~~~---~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 101 -------HCEHGRRAITRSD-ADG-QAH---LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp -------EEETTTTEEEEEC-TTS-CEE---EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred -------EEECCCCEEEEEC-CCC-CEE---EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCC
Confidence 4444556677766 211 100 0000000111134678999999998886 3 1 2
Q ss_pred CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC------CeEEEEEcCCCceeccccccccc
Q 015363 254 LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK------GSIRLIDMRQSALCDTHSKLFEE 327 (408)
Q Consensus 254 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~ 327 (408)
+.|..||..++ ....+ . .......++|+|++ +.|+.+... +.|.+|++..+.... ...+..
T Consensus 169 ~~v~~~d~~~g-~~~~~--------~-~~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~--~~~~~~ 235 (305)
T 3dr2_A 169 HSVYRLPPDGS-PLQRM--------A-DLDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGALHD--RRHFAS 235 (305)
T ss_dssp EEEEEECSSSC-CCEEE--------E-EESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTEEEE--EEEEEC
T ss_pred CeEEEEcCCCC-cEEEE--------e-cCCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCCccC--CeEEEE
Confidence 45677776532 22221 1 23345789999999 766666554 789999987653110 011110
Q ss_pred ccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCceeeeeecccccc
Q 015363 328 QEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLRP 387 (408)
Q Consensus 328 ~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~~~~~~~~ 387 (408)
.. ...+..++++++|++.++. .+.|.+|+.+ ++.+..+..+.....
T Consensus 236 ~~-----------~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~--g~~~~~~~~~~~~~~ 281 (305)
T 3dr2_A 236 VP-----------DGLPDGFCVDRGGWLWSSS-GTGVCVFDSD--GQLLGHIPTPGTASN 281 (305)
T ss_dssp CS-----------SSCCCSEEECTTSCEEECC-SSEEEEECTT--SCEEEEEECSSCCCE
T ss_pred CC-----------CCCCCeEEECCCCCEEEec-CCcEEEECCC--CCEEEEEECCCceeE
Confidence 00 1234568899999955555 4459999983 688888876654333
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.92 E-value=8.8e-08 Score=92.23 Aligned_cols=218 Identities=7% Similarity=0.019 Sum_probs=119.1
Q ss_pred cceeEEEEeecCCCcEEEEEe-----CCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeee
Q 015363 113 EKINKIRWCQSANSALYLLST-----NDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGE 187 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~-----~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~ 187 (408)
..+..++|+| ||+++|.+. .+..|++||+.+++......... ....++|+ ||+.+.
T Consensus 129 ~~l~~~~~Sp--Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~----------------k~~~~~Ws-Dg~~l~ 189 (693)
T 3iuj_A 129 TALDQLSFSR--DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV----------------KFSGISWL-GNEGFF 189 (693)
T ss_dssp CEEEEEEECT--TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE----------------ESCCCEEE-TTTEEE
T ss_pred EEEEEEEECC--CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc----------------eeccEEEe-CCCEEE
Confidence 4588889965 488888643 33589999999998654311100 00147888 888762
Q ss_pred cccccccC-ccccCCCCCceeeeceeeeccccccccccceeeccc-cccceEEEEeCCCCCEEEEe-----cCCeEEEEe
Q 015363 188 RNFGCASN-DSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHA-HDYHINSISNNSDGETFISA-----DDLRINLWN 260 (408)
Q Consensus 188 ~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~l~~~-----~d~~i~iwd 260 (408)
........ .-+........|++|+ +..... ....+... .. |...+..+.|+|||++|+.. .+..|+++|
T Consensus 190 y~~~~~~~~~~~~~~~~~~~v~~~~-lgt~~~--~~~~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 190 YSSYDKPDGSELSARTDQHKVYFHR-LGTAQE--DDRLVFGA-IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp EEESSCCC-------CCCCEEEEEE-TTSCGG--GCEEEESC-SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEE
T ss_pred EEEecCcccccccccCCCcEEEEEE-CCCCcc--cceEEEec-CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEE
Confidence 11100000 0000001224477666 322110 00111111 22 34457789999999988653 235899999
Q ss_pred CCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC---CeEEEEEcCCCceecccccccccccCCCCcccc
Q 015363 261 LEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK---GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFF 337 (408)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (408)
+......... +..+....... +++++..+++....+ +.|..+|+.++.. ...+.+..+.
T Consensus 266 ~~~~~~~~~~-------l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~-------- 327 (693)
T 3iuj_A 266 LSQENAPLLT-------VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP--AHWRDLIPER-------- 327 (693)
T ss_dssp TTSTTCCCEE-------EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECCC--------
T ss_pred CCCCCCceEE-------EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc--cccEEEecCC--------
Confidence 9855433322 23334444444 667773555555443 6899999987642 1112333332
Q ss_pred ccccceeEEEEEccCCCEEEEe--CCC--eEEEEECCCCCCceeee
Q 015363 338 TEIIASISDIKFARNGRHILSR--DYM--TLKLWDINMDSGPVATF 379 (408)
Q Consensus 338 ~~h~~~i~~~~~spdg~~l~s~--~d~--~v~~wd~~~~~~~~~~~ 379 (408)
..+. .|++++++|+.. .++ .|++|+++. ...+.+
T Consensus 328 ----~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g--~~~~~l 365 (693)
T 3iuj_A 328 ----QQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG--KRVREV 365 (693)
T ss_dssp ----SSCE--EEEEETTEEEEEEEETTEEEEEEECTTS--CEEEEE
T ss_pred ----CCEE--EEEEECCEEEEEEEECCeeEEEEEECCC--CeeEEe
Confidence 2343 899999988866 243 788998863 444444
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.91 E-value=1.1e-06 Score=77.61 Aligned_cols=218 Identities=7% Similarity=0.047 Sum_probs=114.7
Q ss_pred eeEEEEeecCCCcEEEEEeCC------CeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 115 INKIRWCQSANSALYLLSTND------KTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
-..+..+ ++| +++++..+ +.|.+.|..+.+.+........+ .+.-+ .++|+|+++.+.+
T Consensus 140 Ph~~~~~--pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~-----~~~~Y-------d~~~~p~~~~mvs 204 (462)
T 2ece_A 140 LHTVHCG--PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD-----QYLAY-------DFWWNLPNEVLVS 204 (462)
T ss_dssp EEEEEEC--SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT-----CCCCC-------CEEEETTTTEEEE
T ss_pred ccceeEC--CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC-----ccccc-------eEEECCCCCEEEE
Confidence 3445564 447 66666544 78999999999988877643222 11111 4788999987622
Q ss_pred cc-c--------cccCccccCCCCCceeeeceeeeccccccccccceeeccc-cccceEEEEe--CCCCCEEEEe-c---
Q 015363 189 NF-G--------CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHA-HDYHINSISN--NSDGETFISA-D--- 252 (408)
Q Consensus 189 ~~-~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~--~~~~~~l~~~-~--- 252 (408)
.. + ........ .....|.+|| +... +..+.+..+ .......+.| +|+++++.++ .
T Consensus 205 S~wg~p~~~~~g~~~~~~~~--~~~d~V~v~D-~~~~------k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~ 275 (462)
T 2ece_A 205 SEWAVPNTIEDGLKLEHLKD--RYGNRIHFWD-LRKR------KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSL 275 (462)
T ss_dssp CBCCCHHHHTTCCCTTTHHH--HSCCEEEEEE-TTTT------EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEET
T ss_pred ccCcCccccccccchhhhhh--ccCCEEEEEE-CCCC------cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeec
Confidence 21 0 00000000 3478899999 4331 112222121 1233445555 9999887765 4
Q ss_pred ---CCeEEEEeCCCCCc--eeeEeecCCCcccC-----------CcCCeEEEEEcCCCCceEEEEe-CCCeEEEEEcCCC
Q 015363 253 ---DLRINLWNLEISNQ--SFNIVDVKPANMED-----------LTEVITSAEFHPTHCNMLAYSS-SKGSIRLIDMRQS 315 (408)
Q Consensus 253 ---d~~i~iwd~~~~~~--~~~~~~~~~~~~~~-----------~~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~ 315 (408)
+++|.+|..+. +. ..+.+++......+ -......|.++||| ++|.++. ..+.|.+||+...
T Consensus 276 ~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG-rfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 276 KDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD-KFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp TTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS-CEEEEEETTTTEEEEEECSST
T ss_pred cCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC-CEEEEEeCCCCEEEEEEecCC
Confidence 45887777653 32 12222222111110 02346789999999 6555554 4789999998633
Q ss_pred ceecccccccccccC-CCCcccccc--ccceeEEEEEccCCCEEEEeC
Q 015363 316 ALCDTHSKLFEEQEA-PGTRSFFTE--IIASISDIKFARNGRHILSRD 360 (408)
Q Consensus 316 ~~~~~~~~~~~~~~~-~~~~~~~~~--h~~~i~~~~~spdg~~l~s~~ 360 (408)
... +.+..+..... ..... ..+ -.+....+.++|||++|+++.
T Consensus 354 ~~~-~lv~~I~tGG~~~~~~~-~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 354 FKP-VLTGKVKLGGIFHRADH-PAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSC-EEEEEEECBTTTTCBCC-TTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCc-EEEEEEEeCCeeccccc-cccccCCCCCCEEEEcCCCCEEEEEc
Confidence 111 00111111000 00000 000 011357789999999998876
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.90 E-value=1.1e-06 Score=76.21 Aligned_cols=208 Identities=9% Similarity=0.032 Sum_probs=122.6
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
..+..|+|+ .+.++++...++.|..||..+++.... ... ..+. .+.+.++|+.+
T Consensus 51 ~egp~~~~~-~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~---------~~v~-------~i~~~~dg~l~-------- 104 (326)
T 2ghs_A 51 GEGPTFDPA-SGTAWWFNILERELHELHLASGRKTVH-ALP---------FMGS-------ALAKISDSKQL-------- 104 (326)
T ss_dssp EEEEEEETT-TTEEEEEEGGGTEEEEEETTTTEEEEE-ECS---------SCEE-------EEEEEETTEEE--------
T ss_pred CcCCeEeCC-CCEEEEEECCCCEEEEEECCCCcEEEE-ECC---------Ccce-------EEEEeCCCeEE--------
Confidence 457789754 244666666789999999988765432 221 1222 67888998865
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeecc-ccccceEEEEeCCCCCEEEEe-cC------CeEEEEeCCCCCc
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAH-AHDYHINSISNNSDGETFISA-DD------LRINLWNLEISNQ 266 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~~~-~d------~~i~iwd~~~~~~ 266 (408)
++. .+ .|.+|| ......... ..... .....++.++++|+|+++++. .+ +.|..++ .+.
T Consensus 105 ----v~~-~~-gl~~~d-~~~g~~~~~----~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~---~g~ 170 (326)
T 2ghs_A 105 ----IAS-DD-GLFLRD-TATGVLTLH----AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA---KGK 170 (326)
T ss_dssp ----EEE-TT-EEEEEE-TTTCCEEEE----ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE---TTE
T ss_pred ----EEE-CC-CEEEEE-CCCCcEEEE----eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe---CCc
Confidence 332 33 377766 322111100 00000 112468899999999987765 32 4455555 233
Q ss_pred eeeEeecCCCcccCCcCCeEEEEEcCCCCceE-EEEeCCCeEEEEEcC--CC-ceecccccccccccCCCCccccccccc
Q 015363 267 SFNIVDVKPANMEDLTEVITSAEFHPTHCNML-AYSSSKGSIRLIDMR--QS-ALCDTHSKLFEEQEAPGTRSFFTEIIA 342 (408)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~s~~~dg~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~ 342 (408)
...+ ..+......++|+|++ +.| ++.+.++.|.+||+. ++ ..... ..+... .....
T Consensus 171 ~~~~--------~~~~~~~~~i~~s~dg-~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~--~~~~~~---------~~~~~ 230 (326)
T 2ghs_A 171 VTKL--------FADISIPNSICFSPDG-TTGYFVDTKVNRLMRVPLDARTGLPTGKA--EVFIDS---------TGIKG 230 (326)
T ss_dssp EEEE--------EEEESSEEEEEECTTS-CEEEEEETTTCEEEEEEBCTTTCCBSSCC--EEEEEC---------TTSSS
T ss_pred EEEe--------eCCCcccCCeEEcCCC-CEEEEEECCCCEEEEEEcccccCCcccCc--eEEEEC---------CCCCC
Confidence 3221 1123346789999999 655 454557899999986 44 32100 111100 00124
Q ss_pred eeEEEEEccCCCEEEEe-CCCeEEEEECCCCCCceeeeeeccc
Q 015363 343 SISDIKFARNGRHILSR-DYMTLKLWDINMDSGPVATFQVHEH 384 (408)
Q Consensus 343 ~i~~~~~spdg~~l~s~-~d~~v~~wd~~~~~~~~~~~~~~~~ 384 (408)
.+..++++++|.+.++. .++.|..||.. ++.+..+..+..
T Consensus 231 ~p~gi~~d~~G~lwva~~~~~~v~~~d~~--g~~~~~i~~~~~ 271 (326)
T 2ghs_A 231 GMDGSVCDAEGHIWNARWGEGAVDRYDTD--GNHIARYEVPGK 271 (326)
T ss_dssp EEEEEEECTTSCEEEEEETTTEEEEECTT--CCEEEEEECSCS
T ss_pred CCCeeEECCCCCEEEEEeCCCEEEEECCC--CCEEEEEECCCC
Confidence 56789999999877776 45899999983 677777765543
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.88 E-value=9.8e-06 Score=71.52 Aligned_cols=260 Identities=6% Similarity=-0.061 Sum_probs=140.0
Q ss_pred EECCCCCeEEEeec--CC---eEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccccee
Q 015363 42 EFDKSGDHLATGDR--GG---RVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN 116 (408)
Q Consensus 42 ~~s~~~~~l~sg~~--dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~ 116 (408)
...|+++++++... .. +|.++|..+++. +..+.... . -
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~-----------------------~~~i~~g~------------~-p- 69 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSI-----------------------LGHVNGGF------------L-P- 69 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeE-----------------------EEEecCCC------------C-C-
Confidence 34477887776653 22 789999877652 22222221 2 2
Q ss_pred EEEEeecCCCcEEEEEe----------CCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCee
Q 015363 117 KIRWCQSANSALYLLST----------NDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCG 186 (408)
Q Consensus 117 ~v~~~p~~~~~~l~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 186 (408)
.++++|+ |++++++. .++.|.+||..+.+............. .....+-.+.++|+|+.+
T Consensus 70 ~i~~spD--g~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~--------~~g~~p~~~~~spDG~~l 139 (373)
T 2mad_H 70 NPVAAHS--GSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRF--------DVGPYSWMNANTPNNADL 139 (373)
T ss_pred CeEECCC--CCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccc--------ccCCCccceEECCCCCEE
Confidence 7889655 88888875 367899999998877665544210000 000112258999999998
Q ss_pred ecccccccCccccCCCC--Cceeeeceeeecccccccccccee-eccccccceEEEEeCCCCC-EEEEe-cCCeEEEEeC
Q 015363 187 ERNFGCASNDSSFPPGG--VSSLRLPVVVTSQETNLVAGCRRI-YAHAHDYHINSISNNSDGE-TFISA-DDLRINLWNL 261 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~-~l~~~-~d~~i~iwd~ 261 (408)
+.+.. ++.|.++| -.. +.... + .. . .++.+.|++. .+++. .||.+.++|.
T Consensus 140 ------------~v~n~~~~~~v~viD-~t~-------~~~~~~i-~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 140 ------------LFFQFAAGPAVGLVV-QGG-------SSDDQLL-SS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred ------------EEEecCCCCeEEEEE-CCC-------CEEeEEc-CC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 54432 46677755 211 11111 1 11 0 1244556653 33444 7899999999
Q ss_pred CCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccccc
Q 015363 262 EISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEII 341 (408)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 341 (408)
+.+.... ....+. +.+.........+.+++ ..++..+..+.+.+.|+....... +..+......... ..-..
T Consensus 195 -~g~~~~~-~~~~~~-~~~~~p~~~~~~~~~~~-~~~~~~~~~~~v~vid~~~~~~~v--~~~~~~~~~~~~~--~~~~p 266 (373)
T 2mad_H 195 -AGGAAGA-GLVGAM-LTAAQNLLTQPAQANKS-GRIVWPVYSGKILQADISAAGATN--KAPIDALSGGRKA--DTWRP 266 (373)
T ss_pred -CCcEEEE-Eecccc-ccCCcceeecceeEecC-CEEEEEcCCceEEEEeccCCcceE--eeeeeecCCcccc--cceec
Confidence 4543311 111000 11111112345677776 444444478899999997653210 0111100000000 00001
Q ss_pred ceeEEEEEccCCCEEEEeC-----------CCeEEEEECCCCCCceeeeeec
Q 015363 342 ASISDIKFARNGRHILSRD-----------YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 342 ~~i~~~~~spdg~~l~s~~-----------d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
.....+.++||++.|+.+. .+.|.++|+.+ ++.++++...
T Consensus 267 ~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~g 317 (373)
T 2mad_H 267 GGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISLG 317 (373)
T ss_pred CceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEECC
Confidence 2344578999998877652 15799999998 6888887653
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.87 E-value=1.3e-07 Score=86.36 Aligned_cols=124 Identities=10% Similarity=0.079 Sum_probs=79.0
Q ss_pred ceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCcee--------eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC
Q 015363 235 HINSISNNSDGETFISA--DDLRINLWNLEISNQSF--------NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK 304 (408)
Q Consensus 235 ~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 304 (408)
...++.++|||++++++ .+.+|.++|+.+....+ .+. .+.. -......++|+|+| ..+++.--|
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~----~~v~-vG~gP~h~aF~~dG-~aY~t~~ld 351 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV----AEPE-LGLGPLHTAFDGRG-NAYTSLFLD 351 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE----ECCB-CCSCEEEEEECTTS-EEEEEETTT
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE----EEcC-CCCCcceEEECCCC-eEEEEEecC
Confidence 45678999999988876 79999999998432100 000 0111 23457899999999 877788889
Q ss_pred CeEEEEEcCCCc------eecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe---CCCeE-----------
Q 015363 305 GSIRLIDMRQSA------LCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR---DYMTL----------- 364 (408)
Q Consensus 305 g~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~---~d~~v----------- 364 (408)
++|..||+.+.. .....+..+..|-. .+|...-..+.++|||++|+++ +-..+
T Consensus 352 sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq-------pGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ 424 (595)
T 1fwx_A 352 SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ-------PGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPEND 424 (595)
T ss_dssp TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC-------EEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEE
T ss_pred CcEEEEEhhHhhhhhcccccceeEEEeecccc-------cccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcc
Confidence 999999998621 11111233333310 1232222334668999999987 31345
Q ss_pred EEEECCC
Q 015363 365 KLWDINM 371 (408)
Q Consensus 365 ~~wd~~~ 371 (408)
.++|+..
T Consensus 425 ql~dis~ 431 (595)
T 1fwx_A 425 QLIDISG 431 (595)
T ss_dssp EEEECSS
T ss_pred eEEEcCC
Confidence 8999964
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=2.1e-06 Score=75.03 Aligned_cols=79 Identities=10% Similarity=0.031 Sum_probs=46.8
Q ss_pred CeEEEEEcCCCCceEEEEeCCC-eEEEEEcCC---Cceecc-cccccccccCCCCccccccccceeEEEEEccCCCEEEE
Q 015363 284 VITSAEFHPTHCNMLAYSSSKG-SIRLIDMRQ---SALCDT-HSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILS 358 (408)
Q Consensus 284 ~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s 358 (408)
.+..|+|+|++ +.|+++..++ .|..++... +..... ....+.. .++......++++++|.++++
T Consensus 196 ~~~gia~s~dg-~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~g~pdgia~d~~G~l~va 264 (343)
T 2qe8_A 196 GVNGIVLDAEN-EWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIER----------YSEKPICDGISIDKDHNIYVG 264 (343)
T ss_dssp CEEEEEECTTS-CEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEE----------EEECCSCSCEEECTTCCEEEE
T ss_pred ccceeEeccCC-CEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEe----------cccCCCCceEEECCCCCEEEE
Confidence 36789999999 7777776655 555554321 110000 0000000 011234567899999998888
Q ss_pred eC-CCeEEEEECCCCCC
Q 015363 359 RD-YMTLKLWDINMDSG 374 (408)
Q Consensus 359 ~~-d~~v~~wd~~~~~~ 374 (408)
.. .+.|.+||..+ ++
T Consensus 265 ~~~~~~V~~~d~~~-G~ 280 (343)
T 2qe8_A 265 DLAHSAIGVITSAD-RA 280 (343)
T ss_dssp EGGGTEEEEEETTT-TE
T ss_pred ccCCCeEEEEECCC-CC
Confidence 75 59999999844 44
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.84 E-value=5e-09 Score=92.70 Aligned_cols=186 Identities=11% Similarity=0.015 Sum_probs=95.6
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCC
Q 015363 125 NSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGV 204 (408)
Q Consensus 125 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 204 (408)
++..+++++.|+.|+.||..+++.+..... . . +. ......++..+ ++++.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~-~--------~~-------s~p~~~~g~~~------------v~~s~d 58 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D-P--------VL-------QVPTHVEEPAF------------LPDPND 58 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C-C--------SC-------CCC-----CCE------------EECTTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C-C--------ce-------ecceEcCCCEE------------EEeCCC
Confidence 356899999999999999999998876655 1 1 10 12223344443 666789
Q ss_pred ceeeeceeeeccccccccccceeeccccc-cceE-EEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCC
Q 015363 205 SSLRLPVVVTSQETNLVAGCRRIYAHAHD-YHIN-SISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDL 281 (408)
Q Consensus 205 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~-~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 281 (408)
+.|..|| ....+.. ... ..+. ..+. +..+. .+..++++ .++.|+.||.++++..... ..+
T Consensus 59 g~l~a~d-~~tG~~~------w~~-~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~--------~~~ 121 (369)
T 2hz6_A 59 GSLYTLG-SKNNEGL------TKL-PFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTL--------SSA 121 (369)
T ss_dssp CCEEEC------CCS------EEC-SCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-------------------
T ss_pred CEEEEEE-CCCCcee------eee-eccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEe--------cCC
Confidence 9999998 4332221 111 1110 0110 00111 34456666 8899999999965544332 222
Q ss_pred cCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccC----CCEEE
Q 015363 282 TEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARN----GRHIL 357 (408)
Q Consensus 282 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spd----g~~l~ 357 (408)
. ...++|++ ..+++++.|+.|+.||.++++.+ ..+... ......++++ +.+++
T Consensus 122 ~----~~~~~p~~-~~v~~~~~dg~v~a~d~~tG~~~----W~~~~~--------------~~~~~~~~~~~~~~~~v~~ 178 (369)
T 2hz6_A 122 F----ADSLSPST-SLLYLGRTEYTITMYDTKTRELR----WNATYF--------------DYAASLPEDDVDYKMSHFV 178 (369)
T ss_dssp ----------------EEEEEEEEEEECCCSSSSSCC----CEEEEE--------------EECCBCCCCCTTCCCCEEE
T ss_pred C----cccccccC-CEEEEEecCCEEEEEECCCCCEE----EeEecc--------------cccCccccCCccccceEEE
Confidence 1 23456777 78888899999999999998654 222211 1112223332 45555
Q ss_pred EeCCCeEEEEECCCCCCceeeee
Q 015363 358 SRDYMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 358 s~~d~~v~~wd~~~~~~~~~~~~ 380 (408)
++.++.|..||.++ |+.+-.+.
T Consensus 179 ~~~dg~v~a~d~~t-G~~~W~~~ 200 (369)
T 2hz6_A 179 SNGDGLVVTVDSES-GDVLWIQN 200 (369)
T ss_dssp EETSCEEEEECTTT-CCEEEEEE
T ss_pred ECCCCEEEEEECCC-CcEEEEec
Confidence 45679999999997 67766665
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.81 E-value=1.5e-05 Score=66.83 Aligned_cols=207 Identities=10% Similarity=0.093 Sum_probs=119.4
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..+..++|.|. ++.++++-..++.|..+++.++.......... ..+..+++.+++..+
T Consensus 36 ~~~~gi~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~---------------~~p~~ia~d~~~~~l------ 93 (267)
T 1npe_A 36 KVIIGLAFDCV-DKVVYWTDISEPSIGRASLHGGEPTTIIRQDL---------------GSPEGIALDHLGRTI------ 93 (267)
T ss_dssp EEEEEEEEETT-TTEEEEEETTTTEEEEEESSSCCCEEEECTTC---------------CCEEEEEEETTTTEE------
T ss_pred CcEEEEEEecC-CCEEEEEECCCCEEEEEecCCCCcEEEEECCC---------------CCccEEEEEecCCeE------
Confidence 34778999653 23444455567899999998765433322110 112267888876655
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--c--CCeEEEEeCCCCCcee
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--D--DLRINLWNLEISNQSF 268 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~--d~~i~iwd~~~~~~~~ 268 (408)
+++....+.|.+++ ..... ...+..........++++|++..|..+ . .+.|..++++ +....
T Consensus 94 -----yv~d~~~~~I~~~~-~~g~~-------~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~ 159 (267)
T 1npe_A 94 -----FWTDSQLDRIEVAK-MDGTQ-------RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRR 159 (267)
T ss_dssp -----EEEETTTTEEEEEE-TTSCS-------CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCE
T ss_pred -----EEEECCCCEEEEEE-cCCCC-------EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcE
Confidence 24444556777766 32211 111111122456899999976555444 3 4788888887 32221
Q ss_pred eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEE
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIK 348 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 348 (408)
.+. .........++++|++..++++-...+.|.++|+...... ..+... .....++
T Consensus 160 ~~~-------~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~----~~~~~~-------------~~P~gi~ 215 (267)
T 1npe_A 160 ILA-------QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR----KVLEGL-------------QYPFAVT 215 (267)
T ss_dssp EEE-------CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE----EEEECC-------------CSEEEEE
T ss_pred EEE-------ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE----EEecCC-------------CCceEEE
Confidence 111 1122456899999987355566666789999999754321 111111 1234555
Q ss_pred EccCCCEEEEe-C-CCeEEEEECCCCCCceeeeeec
Q 015363 349 FARNGRHILSR-D-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 349 ~spdg~~l~s~-~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
.. +..|+.+ . .+.|..+|..+ ++.++++...
T Consensus 216 ~d--~~~lyva~~~~~~v~~~d~~~-g~~~~~i~~g 248 (267)
T 1npe_A 216 SY--GKNLYYTDWKTNSVIAMDLAI-SKEMDTFHPH 248 (267)
T ss_dssp EE--TTEEEEEETTTTEEEEEETTT-TEEEEEECCS
T ss_pred Ee--CCEEEEEECCCCeEEEEeCCC-CCceEEEccc
Confidence 54 4455544 3 48999999987 6777777543
No 226
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.81 E-value=2.4e-06 Score=74.75 Aligned_cols=260 Identities=8% Similarity=0.024 Sum_probs=142.8
Q ss_pred EEECCCCCeEEEeec-----CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 41 IEFDKSGDHLATGDR-----GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 41 ~~~s~~~~~l~sg~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
....|+++.+++... ++.|.+.|..+.+. +..+.... .+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v-----------------------~~~I~vG~------------~P- 81 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV-----------------------IGMIDGGF------------LP- 81 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE-----------------------EEEEEECS------------SC-
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE-----------------------EEEEECCC------------CC-
Confidence 455789988877765 67999999887653 23333222 22
Q ss_pred eEEEEeecCCCcEEEEEe----------CCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 116 NKIRWCQSANSALYLLST----------NDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
.++++| +|++++++. .++.|.+||..+.+....+...... -......+..+.++|||+.
T Consensus 82 -~va~sp--DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~--------r~~~g~~P~~~a~spDGk~ 150 (386)
T 3sjl_D 82 -NPVVAD--DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP--------RFLVGTYPWMTSLTPDGKT 150 (386)
T ss_dssp -EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC--------CCCBSCCGGGEEECTTSSE
T ss_pred -cEEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc--------ccccCCCCceEEEcCCCCE
Confidence 388865 487777765 3678999999999887766543200 0000112236899999998
Q ss_pred eecccccccCccccCCC--CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCC
Q 015363 186 GERNFGCASNDSSFPPG--GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLE 262 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~ 262 (408)
+ +.+. .++.|.++| +...+ ....+ .... . ...+....+.+++. .||++.+.++.
T Consensus 151 l------------yVan~~~~~~VsVID-~~t~~------vv~tI-~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 151 L------------LFYQFSPAPAVGVVD-LEGKA------FKRML-DVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp E------------EEEECSSSCEEEEEE-TTTTE------EEEEE-ECCS--E-EEEEEEETTEEEEEETTSCEEEEECC
T ss_pred E------------EEEEcCCCCeEEEEE-CCCCc------EEEEE-ECCC--c-ceeecCCCceeEEECCCCCEEEEECC
Confidence 7 5443 368899988 33221 11111 1000 0 11121122344443 67777777776
Q ss_pred CCCceeeEeecCCCcccCCcCCeE-EEEEc-CCCCceEEEEeCCCeEEEEEcCCCce-eccccccccc--ccCCCCcccc
Q 015363 263 ISNQSFNIVDVKPANMEDLTEVIT-SAEFH-PTHCNMLAYSSSKGSIRLIDMRQSAL-CDTHSKLFEE--QEAPGTRSFF 337 (408)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~--~~~~~~~~~~ 337 (408)
..++...... ..+......+. ...|. ++| +++. .+.+|+|.+.|+.+... +..++..+.. -..
T Consensus 208 ~~g~v~~~~~---~~~~~~~~~~~~~~~~~~~dG-~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~------- 275 (386)
T 3sjl_D 208 TEGTPEITHT---EVFHPEDEFLINHPAYSQKAG-RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD------- 275 (386)
T ss_dssp SSSCCEEEEC---CCCSCTTSCBCSCCEEETTTT-EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHT-------
T ss_pred CCCeEEEeec---ceeccccccccccceeEcCCC-cEEE-EeCCCEEEEEECCCCcceeecceeccccccccc-------
Confidence 4233221110 01111112221 24664 677 5444 56689999999976642 1111111110 000
Q ss_pred ccccceeEEEEEccCCCEEEEeC-----------CCeEEEEECCCCCCceeeeeecc
Q 015363 338 TEIIASISDIKFARNGRHILSRD-----------YMTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 338 ~~h~~~i~~~~~spdg~~l~s~~-----------d~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
.-.......++++|+++.|+... .+.|.+.|+.+ ++.++.+..-.
T Consensus 276 g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~vg~ 331 (386)
T 3sjl_D 276 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEMGH 331 (386)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEEE
T ss_pred cccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEECCC
Confidence 00012333477799998887752 15799999998 78888876543
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.74 E-value=4.2e-07 Score=79.57 Aligned_cols=71 Identities=3% Similarity=-0.072 Sum_probs=51.9
Q ss_pred EEeCCCCCEEEEe-c-C--------CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEe-CCCeE
Q 015363 239 ISNNSDGETFISA-D-D--------LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSS-SKGSI 307 (408)
Q Consensus 239 i~~~~~~~~l~~~-~-d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~i 307 (408)
++++|+++.+..+ . . +.+.++|+.+.+ .+..+ .. ......++|+|++..++++.. .++.|
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~-vv~~i-------~v-g~~p~gi~~s~Dg~~l~va~~~~~~~V 339 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ-TSGPI-------SN-GHDSDAIIAAQDGASDNYANSAGTEVL 339 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC-EEECC-------EE-EEEECEEEECCSSSCEEEEEETTTTEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe-EEEEE-------EC-CCCcceEEECCCCCEEEEEccCCCCeE
Confidence 6899999888765 4 3 367799999544 33332 21 124688999999944677777 59999
Q ss_pred EEEEcCCCcee
Q 015363 308 RLIDMRQSALC 318 (408)
Q Consensus 308 ~iwd~~~~~~~ 318 (408)
.++|+.+++.+
T Consensus 340 sVID~~t~kvv 350 (368)
T 1mda_H 340 DIYDAASDQDQ 350 (368)
T ss_dssp EEEESSSCEEE
T ss_pred EEEECCCCcEE
Confidence 99999999765
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.73 E-value=6.2e-06 Score=68.21 Aligned_cols=207 Identities=8% Similarity=0.002 Sum_probs=127.5
Q ss_pred eeecc--ceEEEEECCCCCeEEEeec--CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeec--cCCccccc
Q 015363 32 VQEVD--IISAIEFDKSGDHLATGDR--GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQ--SHEPEFDY 105 (408)
Q Consensus 32 ~~h~~--~V~~~~~s~~~~~l~sg~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~h~~~~~~ 105 (408)
+.|.. ....++|++++.++++.+. ++.|.+.|..+++.. ..+. .+.
T Consensus 15 ~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~-----------------------~~i~l~~~~----- 66 (266)
T 2iwa_A 15 FPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVE-----------------------NIHKMDDSY----- 66 (266)
T ss_dssp EECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEE-----------------------EEEECCTTC-----
T ss_pred EECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEE-----------------------EEEecCCCc-----
Confidence 44543 3578999998765555443 579999999887631 2211 111
Q ss_pred ccccccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCe
Q 015363 106 LKSLEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGC 185 (408)
Q Consensus 106 ~~~~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 185 (408)
....+++ . ++.++++.-.++.+.++|..+.+.+..+... .+ . ....+++|+.
T Consensus 67 --------fgeGi~~--~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~-----~-----------g~glt~Dg~~ 118 (266)
T 2iwa_A 67 --------FGEGLTL--L-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MK-----D-----------GWGLATDGKI 118 (266)
T ss_dssp --------CEEEEEE--E-TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SS-----S-----------CCEEEECSSS
T ss_pred --------ceEEEEE--e-CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CC-----C-----------eEEEEECCCE
Confidence 1234555 3 2345555568899999999999887776543 11 1 2345567776
Q ss_pred eecccccccCccccCCCCCceeeeceeeeccccccccccceeecc-cc---ccceEEEEeCCCCCEEEEe-cCCeEEEEe
Q 015363 186 GERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAH-AH---DYHINSISNNSDGETFISA-DDLRINLWN 260 (408)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~v~~i~~~~~~~~l~~~-~d~~i~iwd 260 (408)
+ +.+..++.|.++| ....+ ..+.+.. .. -..++.+.|. ++..++.. .++.|.+.|
T Consensus 119 l------------~vs~gs~~l~viD-~~t~~------v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 119 L------------YGSDGTSILYEID-PHTFK------LIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARIS 178 (266)
T ss_dssp E------------EEECSSSEEEEEC-TTTCC------EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred E------------EEECCCCeEEEEE-CCCCc------EEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEE
Confidence 6 5445678888877 32211 1111111 11 1236677777 67666666 789999999
Q ss_pred CCCCCceeeEeecCCC------cccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCC
Q 015363 261 LEISNQSFNIVDVKPA------NMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQS 315 (408)
Q Consensus 261 ~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 315 (408)
.. ..+....+++... .-.........|+|+|++.++++++...+.|...++...
T Consensus 179 ~~-tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 179 AK-DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TT-TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CC-CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99 4555555543210 000112356899999998678888888899999888754
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.68 E-value=3.1e-08 Score=87.65 Aligned_cols=186 Identities=7% Similarity=0.038 Sum_probs=93.8
Q ss_pred CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEEeecCC
Q 015363 46 SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSAN 125 (408)
Q Consensus 46 ~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~~p~~~ 125 (408)
++..+++++.||.|..||..+++.. -.+.. . .+.+..+. .+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~-----------------------W~~~~-~-------------~~~s~p~~--~~ 48 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIK-----------------------WTLKE-D-------------PVLQVPTH--VE 48 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEE-----------------------EEEEC-C-------------CSCCCC------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEE-----------------------EEecC-C-------------CceecceE--cC
Confidence 5778999999999999999887642 11221 1 12232332 23
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCc
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVS 205 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (408)
+..+++++.|+.|+.||..+++.+.....+.... +. . ..... .+.. +++++.++
T Consensus 49 g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~-------~~----~--sp~~~-~~~~------------v~~g~~dg 102 (369)
T 2hz6_A 49 EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL-------VQ----A--SPCRS-SDGI------------LYMGKKQD 102 (369)
T ss_dssp -CCEEECTTTCCEEEC-----CCSEECSCCHHHH-------HT----T--CSCC------------------CCCCEEEE
T ss_pred CCEEEEeCCCCEEEEEECCCCceeeeeeccCccc-------cc----c--CceEe-cCCE------------EEEEeCCC
Confidence 5577777899999999998887655443321100 00 0 00011 1222 37788889
Q ss_pred eeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCC
Q 015363 206 SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEV 284 (408)
Q Consensus 206 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 284 (408)
.+..|| .... +.+..+ ..+. ...++|++..++++ .|+.|+.||.++++.....- ...
T Consensus 103 ~v~a~D-~~tG------~~~w~~-~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~------~~~---- 160 (369)
T 2hz6_A 103 IWYVID-LLTG------EKQQTL-SSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT------YFD---- 160 (369)
T ss_dssp EEEEEC-CC---------------------------------EEEEEEEEEEECCCSSSSSCCCEEE------EEE----
T ss_pred EEEEEE-CCCC------cEEEEe-cCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe------ccc----
Confidence 999988 4332 222221 1111 23456677888887 89999999998665444321 111
Q ss_pred eEEEEEcCCC--CceEEEEeCCCeEEEEEcCCCcee
Q 015363 285 ITSAEFHPTH--CNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 285 v~~~~~~p~~--~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
.....+.++. ...+++++.||.|+.||.++++..
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred ccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 1122333321 034666888999999999998754
No 230
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.67 E-value=4.7e-06 Score=74.21 Aligned_cols=258 Identities=6% Similarity=0.004 Sum_probs=138.5
Q ss_pred CCCCeEEEeecC-----CeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEE
Q 015363 45 KSGDHLATGDRG-----GRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIR 119 (408)
Q Consensus 45 ~~~~~l~sg~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~ 119 (408)
++++.+++.... +.|.++|..+.+. +..+..-. .+ .+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~v-----------------------v~~I~vG~------------~P--gia 124 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRI-----------------------LGMTDGGF------------LP--HPV 124 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEE-----------------------EEEEEECS------------SC--EEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEE-----------------------EEEEECCC------------CC--ceE
Confidence 467766665542 6999999887753 23333222 33 788
Q ss_pred EeecCCCcEEEEEe----------CCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecc
Q 015363 120 WCQSANSALYLLST----------NDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERN 189 (408)
Q Consensus 120 ~~p~~~~~~l~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~ 189 (408)
++| +|++++++. .++.|.++|..+.+....+....... ......+..+.++|||+.+
T Consensus 125 ~Sp--Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r--------~~~g~~P~~~~~spDGk~l--- 191 (426)
T 3c75_H 125 AAE--DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR--------FLVGTYQWMNALTPDNKNL--- 191 (426)
T ss_dssp ECT--TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC--------CCBSCCGGGSEECTTSSEE---
T ss_pred ECC--CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc--------cccCCCcceEEEcCCCCEE---
Confidence 965 477777765 47799999999998877665420000 0001122268999999987
Q ss_pred cccccCccccCCC--CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC-CEEEEe-cCCeEEEEeCCCCC
Q 015363 190 FGCASNDSSFPPG--GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG-ETFISA-DDLRINLWNLEISN 265 (408)
Q Consensus 190 ~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~-~d~~i~iwd~~~~~ 265 (408)
+.+. .++.|.+.| ....+ ....+.... +....|++ +.+++. .||.+.+.+.. ..
T Consensus 192 ---------yV~n~~~~~~VsVID-~~t~k------vv~~I~v~g-----~~~~~p~g~~~~v~~~~dG~~~~V~~~-~~ 249 (426)
T 3c75_H 192 ---------LFYQFSPAPAVGVVD-LEGKT------FDRMLDVPD-----CYHIFPASPTVFYMNCRDGSLARVDFA-DG 249 (426)
T ss_dssp ---------EEEECSSSCEEEEEE-TTTTE------EEEEEECCS-----EEEEEEEETTEEEEEETTSSEEEEECC-TT
T ss_pred ---------EEEecCCCCeEEEEE-CCCCe------EEEEEEcCC-----ceeeccCCCcEEEEEcCCCCEEEEECC-CC
Confidence 5543 257788877 32221 111111110 01223333 333333 66677666763 33
Q ss_pred ceeeEeecCCCcccCCcCCe-EEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCcccccccccee
Q 015363 266 QSFNIVDVKPANMEDLTEVI-TSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASI 344 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v-~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 344 (408)
+...... ..+.....++ ..+.+.+++ ..++..+..+.|.+.|+....... +..+......... ........
T Consensus 250 ~v~~~~~---~~~~v~~~p~~~~~~~~~dg-~~~~~~s~~g~V~ViD~~~~~~~v--~~~~~~~~~~~i~--~g~~p~g~ 321 (426)
T 3c75_H 250 ETKVTNT---EVFHTEDELLINHPAFSLRS-GRLVWPTYTGKIFQADLTAEGATF--RAPIEALTEAERA--DDWRPGGW 321 (426)
T ss_dssp CCEEEEC---CCCSCTTSCBCSCCEECTTT-CEEEEEBTTSEEEEEEECSSCEEE--CCCEESSCTTTGG--GTEEECSS
T ss_pred cEEEEee---eeeccCCCceeeEeeecCCC-CEEEEEeCCCcEEEEeccCCceEE--eeeeeeccccccc--cccccCCc
Confidence 3221100 0011111111 235788998 566666778999999997654210 0111000000000 00000112
Q ss_pred EEEEEccCCCEEEEeC-----------CCeEEEEECCCCCCceeeeeecc
Q 015363 345 SDIKFARNGRHILSRD-----------YMTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 345 ~~~~~spdg~~l~s~~-----------d~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
..++++||++.|+... .+.|.+.|+.+ .+.++++....
T Consensus 322 ~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~vg~ 370 (426)
T 3c75_H 322 QQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIELGH 370 (426)
T ss_dssp SCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEEE
T ss_pred eeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC-CeEEEEEECCC
Confidence 2368999988777652 24799999998 78888886543
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.67 E-value=1.1e-05 Score=77.41 Aligned_cols=64 Identities=5% Similarity=-0.029 Sum_probs=44.5
Q ss_pred CCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec
Q 015363 304 KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 304 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
+|.|+.||+.+++.. -.+..+ ..+....++..+.+|+.++ |+.|+.||.++ |+.+..++..
T Consensus 454 ~g~l~A~D~~tG~~~----W~~~~~-------------~~~~~g~~~tagglvf~gt~dg~l~a~D~~t-G~~lw~~~~~ 515 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAA----WEVPYV-------------TIFNGGTLSTAGNLVFEGSADGRVIAYAADT-GEKLWEQPAA 515 (689)
T ss_dssp EEEEEEEETTTTEEE----EEEEES-------------SSCCCCEEEETTTEEEEECTTSEEEEEETTT-CCEEEEEECS
T ss_pred ceeEEEEECCCCCeE----eEccCC-------------CCccCccceECCCEEEEECCCCcEEEEECCC-CccceeeeCC
Confidence 377999999998754 222222 1222234556777888885 79999999998 8998888765
Q ss_pred ccc
Q 015363 383 EHL 385 (408)
Q Consensus 383 ~~~ 385 (408)
.+.
T Consensus 516 ~~~ 518 (689)
T 1yiq_A 516 SGV 518 (689)
T ss_dssp SCC
T ss_pred CCc
Confidence 543
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.66 E-value=1.4e-05 Score=76.51 Aligned_cols=62 Identities=8% Similarity=-0.014 Sum_probs=44.0
Q ss_pred CeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeecc
Q 015363 305 GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVHE 383 (408)
Q Consensus 305 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~ 383 (408)
+.|..||+.+++.. -.+... ..+....++.++.+++.++ |+.+++||+++ ++.+..+....
T Consensus 457 g~l~A~D~~tG~~~----W~~~~~-------------~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t-G~~lw~~~~~~ 518 (677)
T 1kb0_A 457 GRLLAWDPVAQKAA----WSVEHV-------------SPWNGGTLTTAGNVVFQGTADGRLVAYHAAT-GEKLWEAPTGT 518 (677)
T ss_dssp EEEEEEETTTTEEE----EEEEES-------------SSCCCCEEEETTTEEEEECTTSEEEEEETTT-CCEEEEEECSS
T ss_pred cEEEEEeCCCCcEE----eecCCC-------------CCCcCcceEeCCCEEEEECCCCcEEEEECCC-CceeeeeeCCC
Confidence 78999999998754 222211 1233345666777888875 79999999998 89998887654
Q ss_pred c
Q 015363 384 H 384 (408)
Q Consensus 384 ~ 384 (408)
.
T Consensus 519 ~ 519 (677)
T 1kb0_A 519 G 519 (677)
T ss_dssp C
T ss_pred C
Confidence 3
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.63 E-value=1.6e-05 Score=65.04 Aligned_cols=189 Identities=13% Similarity=0.168 Sum_probs=112.4
Q ss_pred eEEEEECCCCCeEEEeecCC--eEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 38 ISAIEFDKSGDHLATGDRGG--RVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 38 V~~~~~s~~~~~l~sg~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
...|.|+ ++.++.+.+.+| .|+++|+++++.. ....-. ...
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~-----------------------~~~~l~-------------~~~ 87 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTL-----------------------QQIELG-------------KRY 87 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEE-----------------------EEEECC-------------TTC
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEE-----------------------EEEecC-------------Ccc
Confidence 4778898 677777777766 8999999887631 111111 112
Q ss_pred eE--EEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 116 NK--IRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 116 ~~--v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
.. ++. .. +.++++.-.++.+.++|..+.+.+..+..... .....++++.+
T Consensus 88 FgeGit~--~g-~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e------------------G~glt~dg~~L------- 139 (262)
T 3nol_A 88 FGEGISD--WK-DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE------------------GWGLTHNDQYL------- 139 (262)
T ss_dssp CEEEEEE--ET-TEEEEEESSSSEEEEEETTTCCEEEEEECSSC------------------CCCEEECSSCE-------
T ss_pred ceeEEEE--eC-CEEEEEEeeCCEEEEEECccCcEEEEEECCCC------------------ceEEecCCCEE-------
Confidence 22 343 32 34455555789999999999998887766432 12334566665
Q ss_pred cCccccCCCCCceeeeceeeeccccccccccceeeccccc-cceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEe
Q 015363 194 SNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHD-YHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 194 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~ 271 (408)
+.....+.|.++| ....+.. ..+.....+.. ..++.+.|. +|.+++.. .+..|.+.|.+ .++....+
T Consensus 140 -----~~SdGs~~i~~iD-p~T~~v~---~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~-tG~V~~~I 208 (262)
T 3nol_A 140 -----IMSDGTPVLRFLD-PESLTPV---RTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPE-TGKVTGII 208 (262)
T ss_dssp -----EECCSSSEEEEEC-TTTCSEE---EEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTT-TCBEEEEE
T ss_pred -----EEECCCCeEEEEc-CCCCeEE---EEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECC-CCcEEEEE
Confidence 4445567788877 3221111 10111001111 335567776 67766666 78899999998 56666666
Q ss_pred ecCCCc-----ccCCcCCeEEEEEcCCCCceEEEEe
Q 015363 272 DVKPAN-----MEDLTEVITSAEFHPTHCNMLAYSS 302 (408)
Q Consensus 272 ~~~~~~-----~~~~~~~v~~~~~~p~~~~~l~s~~ 302 (408)
++.... ........+.|+|+|++.+++++|-
T Consensus 209 d~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 209 DLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 653211 0111245689999999856666664
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.60 E-value=1.9e-05 Score=69.94 Aligned_cols=219 Identities=8% Similarity=0.035 Sum_probs=113.8
Q ss_pred cEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCce
Q 015363 127 ALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSS 206 (408)
Q Consensus 127 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (408)
..+++++.++.|..+|..+++.................. ..... ++ .+ +.+..++.
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~----------~~~~~-~~-~v------------~~g~~~g~ 199 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGES----------APTTA-FG-AA------------VVGGDNGR 199 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCC----------CCEEE-TT-EE------------EECCTTTE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCC----------CcEEE-CC-EE------------EEEcCCCE
Confidence 478888899999999999998777665432110000000 00111 22 22 55666777
Q ss_pred eeeceeeeccccccccccceeeccccc------cceEEEEeCC--CCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCc
Q 015363 207 LRLPVVVTSQETNLVAGCRRIYAHAHD------YHINSISNNS--DGETFISA-DDLRINLWNLEISNQSFNIVDVKPAN 277 (408)
Q Consensus 207 i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~i~~~~--~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~ 277 (408)
+..+| ....+. +........ ..+..+...| .+..+..+ .++.+..+|.++++.....
T Consensus 200 l~~~d-~~tG~~------~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~------- 265 (376)
T 3q7m_A 200 VSAVL-MEQGQM------IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR------- 265 (376)
T ss_dssp EEEEE-TTTCCE------EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE-------
T ss_pred EEEEE-CCCCcE------EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec-------
Confidence 77776 322111 111100000 0000011111 23455555 7899999999865544332
Q ss_pred ccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEE
Q 015363 278 MEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHIL 357 (408)
Q Consensus 278 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~ 357 (408)
. ......+... + ..+..++.++.|..+|..+++... ....... ..+..... .+..|+
T Consensus 266 -~--~~~~~~~~~~--~-~~l~~~~~~g~l~~~d~~tG~~~w----~~~~~~~-----------~~~~~~~~--~~~~l~ 322 (376)
T 3q7m_A 266 -E--LGSVNDFIVD--G-NRIYLVDQNDRVMALTIDGGVTLW----TQSDLLH-----------RLLTSPVL--YNGNLV 322 (376)
T ss_dssp -C--CCCEEEEEEE--T-TEEEEEETTCCEEEEETTTCCEEE----EECTTTT-----------SCCCCCEE--ETTEEE
T ss_pred -c--CCCCCCceEE--C-CEEEEEcCCCeEEEEECCCCcEEE----eecccCC-----------CcccCCEE--ECCEEE
Confidence 1 1223344443 4 467777889999999999987542 1110000 11111222 234566
Q ss_pred Ee-CCCeEEEEECCCCCCceeeeeecccccceEEecCCCeeeeeeceeeec
Q 015363 358 SR-DYMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMGLDNIHTLY 407 (408)
Q Consensus 358 s~-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 407 (408)
.+ .++.|.++|..+ ++.+..+...............+.++..++...||
T Consensus 323 v~~~~g~l~~~d~~t-G~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~ 372 (376)
T 3q7m_A 323 VGDSEGYLHWINVED-GRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVY 372 (376)
T ss_dssp EECTTSEEEEEETTT-CCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEE
T ss_pred EEeCCCeEEEEECCC-CcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEE
Confidence 66 469999999998 78877776533332222223456666666655554
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.52 E-value=8.6e-05 Score=62.17 Aligned_cols=201 Identities=12% Similarity=0.037 Sum_probs=115.2
Q ss_pred cceEEEEECCCCCeEE-EeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 36 DIISAIEFDKSGDHLA-TGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~-sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
..+..++|++++..|+ +-..++.|..++.++.... ....... ..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-----------------------~~~~~~~------------~~ 80 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-----------------------TIIRQDL------------GS 80 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-----------------------EEECTTC------------CC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-----------------------EEEECCC------------CC
Confidence 4578999999765554 4445679999998654310 1111111 34
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
...+++.|. ++.++++-...+.|.++++............. ..+..+++.|++..+
T Consensus 81 p~~ia~d~~-~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~---------------~~P~~i~vd~~~g~l-------- 136 (267)
T 1npe_A 81 PEGIALDHL-GRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL---------------VNPRGIVTDPVRGNL-------- 136 (267)
T ss_dssp EEEEEEETT-TTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------------SSEEEEEEETTTTEE--------
T ss_pred ccEEEEEec-CCeEEEEECCCCEEEEEEcCCCCEEEEEECCC---------------CCccEEEEeeCCCEE--------
Confidence 778898643 23444455567899999987544332222110 122367888866554
Q ss_pred CccccCCCC---CceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceee
Q 015363 195 NDSSFPPGG---VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 195 ~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~ 269 (408)
+.+.. .+.|..++ +... ....+..........++++|++..|..+ ..+.|.++|... .....
T Consensus 137 ----yv~~~~~~~~~I~~~~-~dg~-------~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~ 203 (267)
T 1npe_A 137 ----YWTDWNRDNPKIETSH-MDGT-------NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-PGRRK 203 (267)
T ss_dssp ----EEEECCSSSCEEEEEE-TTSC-------CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-EEEEE
T ss_pred ----EEEECCCCCcEEEEEe-cCCC-------CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-CceEE
Confidence 22221 35565554 2211 1111111222457889999987766665 678999999973 32222
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
+. .. ......++.. .+ .++++....+.|..+|..+++..
T Consensus 204 ~~-------~~-~~~P~gi~~d-~~-~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 204 VL-------EG-LQYPFAVTSY-GK-NLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp EE-------EC-CCSEEEEEEE-TT-EEEEEETTTTEEEEEETTTTEEE
T ss_pred Ee-------cC-CCCceEEEEe-CC-EEEEEECCCCeEEEEeCCCCCce
Confidence 21 11 2234566665 34 56666656789999999988654
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.51 E-value=2.5e-05 Score=69.03 Aligned_cols=215 Identities=14% Similarity=0.154 Sum_probs=113.1
Q ss_pred CCcEEEE-EeCCCeEEEEEcCCC----cEEEEeccC-CCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccc
Q 015363 125 NSALYLL-STNDKTIKLWKVQEK----KVKKVFDWN-VHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSS 198 (408)
Q Consensus 125 ~~~~l~~-~~~d~~i~vwd~~~~----~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (408)
++++|++ +..+++|.++|+.+. +...+.+.. ... . .+ ...+..+...|+| .+.+..+.
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~-~---~g-----~s~Ph~~~~~pdG-i~Vs~~g~------ 157 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKK-V---SG-----YSRLHTVHCGPDA-IYISALGN------ 157 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHH-H---HC-----EEEEEEEEECSSC-EEEEEEEE------
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhccc-c---cC-----CCcccceeECCCe-EEEEcCCC------
Confidence 3555544 568899999999755 444444200 000 0 00 0011245666777 33111111
Q ss_pred cCCCCCceeeeceeeeccccccccccceeec-ccc-ccceEEEEeCCCCCEEEEec--------------------CCeE
Q 015363 199 FPPGGVSSLRLPVVVTSQETNLVAGCRRIYA-HAH-DYHINSISNNSDGETFISAD--------------------DLRI 256 (408)
Q Consensus 199 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~v~~i~~~~~~~~l~~~~--------------------d~~i 256 (408)
..+...+.|.++| ....+. +..+. ... ...-..+.|+|+++.+++++ ..+|
T Consensus 158 ~~g~~~g~v~vlD-~~T~~v------~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V 230 (462)
T 2ece_A 158 EEGEGPGGILMLD-HYSFEP------LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRI 230 (462)
T ss_dssp TTSCSCCEEEEEC-TTTCCE------EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEE
T ss_pred cCCCCCCeEEEEE-CCCCeE------EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEE
Confidence 1233446777766 322111 11111 111 11233577899999888873 7899
Q ss_pred EEEeCCCCCceeeEeecCCCcccCCcCCeEEEEE--cCCCCceEEEEe------CCCeEEEEEcCCCceeccccccc--c
Q 015363 257 NLWNLEISNQSFNIVDVKPANMEDLTEVITSAEF--HPTHCNMLAYSS------SKGSIRLIDMRQSALCDTHSKLF--E 326 (408)
Q Consensus 257 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~--~ 326 (408)
.+||+.+ .+....+++ .........+.| +|++ +++.+++ .+++|.+|....+.... .+.+ .
T Consensus 231 ~v~D~~~-~k~~~tI~v-----g~~g~~P~~i~f~~~Pdg-~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~--~~vIdi~ 301 (462)
T 2ece_A 231 HFWDLRK-RKRIHSLTL-----GEENRMALELRPLHDPTK-LMGFINMVVSLKDLSSSIWLWFYEDGKWNA--EKVIEIP 301 (462)
T ss_dssp EEEETTT-TEEEEEEES-----CTTEEEEEEEEECSSTTC-CEEEEEEEEETTTCCEEEEEEEEETTEEEE--EEEEEEC
T ss_pred EEEECCC-CcEeeEEec-----CCCCCccceeEeeECCCC-CEEEEEEeeeccCCCceEEEEEecCCceeE--EEEEeCC
Confidence 9999994 455555432 111223455655 9999 5555554 56788887766543211 1111 1
Q ss_pred cccC----CCCccccccccceeEEEEEccCCCEEEEeC--CCeEEEEECCC
Q 015363 327 EQEA----PGTRSFFTEIIASISDIKFARNGRHILSRD--YMTLKLWDINM 371 (408)
Q Consensus 327 ~~~~----~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--d~~v~~wd~~~ 371 (408)
.... +.....+.+-......+.+||||++|+++. .+.|.+||+..
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 0000 000000111113478899999999999873 48999999964
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.45 E-value=0.00013 Score=64.48 Aligned_cols=190 Identities=9% Similarity=0.046 Sum_probs=98.8
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCc
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVS 205 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (408)
+..+++++.++.|..+|..+++............ . .... .++ .+ +.++.++
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~-----~----------~p~~-~~~-~v------------~v~~~~g 153 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEAL-----S----------RPVV-SDG-LV------------LIHTSNG 153 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCC-----S----------CCEE-ETT-EE------------EEECTTS
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceE-----c----------CCEE-ECC-EE------------EEEcCCC
Confidence 4578888999999999999998876655432110 0 0011 122 22 5556677
Q ss_pred eeeeceeeeccccccccccceeeccccccce------EEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcc
Q 015363 206 SLRLPVVVTSQETNLVAGCRRIYAHAHDYHI------NSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPANM 278 (408)
Q Consensus 206 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v------~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~ 278 (408)
.|..+| ....+. +... ... ..+ ...... +..++.+ .++.|..+|..+++..... .......
T Consensus 154 ~l~~~d-~~tG~~------~W~~-~~~-~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~-~~~~~~~ 221 (376)
T 3q7m_A 154 QLQALN-EADGAV------KWTV-NLD-MPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQ-RISQATG 221 (376)
T ss_dssp EEEEEE-TTTCCE------EEEE-ECC-C-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEE-ECCC---
T ss_pred eEEEEE-CCCCcE------EEEE-eCC-CCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEE-ecccCCC
Confidence 777776 322111 1111 000 000 111111 3456666 7899999999855544432 1100000
Q ss_pred cCCcCC---e-EEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 279 EDLTEV---I-TSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 279 ~~~~~~---v-~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
...... + ..... .+ ..+..++.++.+..+|.++++... .... .....+.. ++.
T Consensus 222 ~~~~~~~~~~~~~p~~--~~-~~v~~~~~~g~l~~~d~~tG~~~w----~~~~--------------~~~~~~~~--~~~ 278 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVV--VN-GVVFALAYNGNLTALDLRSGQIMW----KREL--------------GSVNDFIV--DGN 278 (376)
T ss_dssp --------CCCCCCEE--ET-TEEEEECTTSCEEEEETTTCCEEE----EECC--------------CCEEEEEE--ETT
T ss_pred CcccccccccCCCcEE--EC-CEEEEEecCcEEEEEECCCCcEEe----eccC--------------CCCCCceE--ECC
Confidence 000000 0 01111 13 466777789999999999986541 1111 12233333 244
Q ss_pred EEEEe-CCCeEEEEECCCCCCceeeee
Q 015363 355 HILSR-DYMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 355 ~l~s~-~d~~v~~wd~~~~~~~~~~~~ 380 (408)
.|+.+ .++.|..+|..+ ++.+....
T Consensus 279 ~l~~~~~~g~l~~~d~~t-G~~~w~~~ 304 (376)
T 3q7m_A 279 RIYLVDQNDRVMALTIDG-GVTLWTQS 304 (376)
T ss_dssp EEEEEETTCCEEEEETTT-CCEEEEEC
T ss_pred EEEEEcCCCeEEEEECCC-CcEEEeec
Confidence 55554 568999999987 67665554
No 238
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.44 E-value=0.00019 Score=59.00 Aligned_cols=219 Identities=9% Similarity=0.133 Sum_probs=118.7
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..+..++|.|+ ++.++++...++.|...|+. ++........... ..- .+++.+++.+.
T Consensus 27 ~~lSGla~~~~-~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~-------D~E-------GIa~~~~g~~~------ 84 (255)
T 3qqz_A 27 NNISSLTWSAQ-SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVK-------DLE-------TIEYIGDNQFV------ 84 (255)
T ss_dssp SCEEEEEEETT-TTEEEEEEETTEEEEEEETT-CCEEEEEECSSCS-------SEE-------EEEECSTTEEE------
T ss_pred cCcceeEEeCC-CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCC-------ChH-------HeEEeCCCEEE------
Confidence 45999999865 34566667889999999998 7766665442110 011 46667777654
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccce-ee-ccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCC--CCce
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRR-IY-AHAHDYHINSISNNSDGETFISA-DDLRINLWNLEI--SNQS 267 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~--~~~~ 267 (408)
++...++.+.+++ +............. .+ ....+..+..++++|.++.|.++ ......+|.++. ....
T Consensus 85 ------vs~E~~~~l~~~~-v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~ 157 (255)
T 3qqz_A 85 ------ISDERDYAIYVIS-LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNE 157 (255)
T ss_dssp ------EEETTTTEEEEEE-ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSC
T ss_pred ------EEECCCCcEEEEE-cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCc
Confidence 4434445566655 32211100000000 00 12334567899999998777666 433334444431 1112
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccc-cccCCCCccccccccceeEE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFE-EQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~i~~ 346 (408)
+.+.......-..+...+..++++|....+++.......|..+|.... ... ...+. +.. -+..-......
T Consensus 158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~--~~~L~~g~~------~l~~~~~qpEG 228 (255)
T 3qqz_A 158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIG--EMSLTKGSR------GLSHNIKQAEG 228 (255)
T ss_dssp CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEE--EEECSTTGG------GCSSCCCSEEE
T ss_pred eeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEE--EEEcCCccC------CcccccCCCCe
Confidence 222211000001122346889999987577777777889999997644 321 11121 110 00000124578
Q ss_pred EEEccCCCEEEEeCCCeEEEEEC
Q 015363 347 IKFARNGRHILSRDYMTLKLWDI 369 (408)
Q Consensus 347 ~~~spdg~~l~s~~d~~v~~wd~ 369 (408)
|+|.++|++.+++..+.++.|.-
T Consensus 229 ia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 229 VAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEECTTCCEEEEETTTEEEEEEC
T ss_pred eEECCCCCEEEEcCCceEEEEEe
Confidence 99999999777765466655543
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.42 E-value=3.7e-05 Score=62.86 Aligned_cols=188 Identities=9% Similarity=0.107 Sum_probs=114.5
Q ss_pred eEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeee-eccCCccccccccccccccee
Q 015363 38 ISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTE-FQSHEPEFDYLKSLEIEEKIN 116 (408)
Q Consensus 38 V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~h~~~~~~~~~~~~~~~v~ 116 (408)
...+.|+ ++.++.+.+.+|.|+++|+++++.. .. +.... ---
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~-----------------------~~~l~~~~-------------Fge 99 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPV-----------------------WMERLGNI-------------FAE 99 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCS-----------------------EEEECTTC-------------CEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEE-----------------------eEECCCCc-------------cee
Confidence 4678887 4667777788889999999988742 11 11110 012
Q ss_pred EEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCc
Q 015363 117 KIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASND 196 (408)
Q Consensus 117 ~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (408)
.+++ . ++.++++.-.++.+.++|..+.+.+..+..... .....++++.+
T Consensus 100 Git~--~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e------------------GwGLt~Dg~~L---------- 148 (268)
T 3nok_A 100 GLAS--D-GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE------------------GWGLCYWNGKL---------- 148 (268)
T ss_dssp EEEE--C-SSCEEEEESSSCEEEEEETTTTEEEEEEECSSC------------------CCCEEEETTEE----------
T ss_pred EEEE--e-CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc------------------eeEEecCCCEE----------
Confidence 2444 3 235566666899999999999998887766321 12333566665
Q ss_pred cccCCCCCceeeeceeeeccccccccccceeeccccc---cceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEee
Q 015363 197 SSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHD---YHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVD 272 (408)
Q Consensus 197 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~ 272 (408)
+.+..++.|.++| ....+.. ..+.. ..+. ..++.+.|. +|.+++.. .+..|.+.|.+ .++....++
T Consensus 149 --~vSdGs~~l~~iD-p~T~~v~---~~I~V--~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~-TG~V~~~Id 218 (268)
T 3nok_A 149 --VRSDGGTMLTFHE-PDGFALV---GAVQV--KLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA-TGTVVGVID 218 (268)
T ss_dssp --EEECSSSEEEEEC-TTTCCEE---EEEEC--EETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT-TCBEEEEEE
T ss_pred --EEECCCCEEEEEc-CCCCeEE---EEEEe--CCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC-CCcEEEEEE
Confidence 5555677888877 3322111 11111 1111 235667776 77766666 78899999998 566666665
Q ss_pred cCCCc------ccCCcCCeEEEEEcCCCCceEEEEeC
Q 015363 273 VKPAN------MEDLTEVITSAEFHPTHCNMLAYSSS 303 (408)
Q Consensus 273 ~~~~~------~~~~~~~v~~~~~~p~~~~~l~s~~~ 303 (408)
+.... ........+.|+++|++.+++++|-.
T Consensus 219 l~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 219 ASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp CHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 43100 11122456899999988677777643
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.40 E-value=0.00025 Score=57.48 Aligned_cols=189 Identities=11% Similarity=0.113 Sum_probs=112.0
Q ss_pred ceEEEEECCCCCeEEEeecC--CeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 37 IISAIEFDKSGDHLATGDRG--GRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 37 ~V~~~~~s~~~~~l~sg~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
-...+.|++ +.++.+.+.. ..|+.+|+.+++.. ....-. ..
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~-----------------------~~~~l~-------------~~ 64 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRIL-----------------------QRAEVP-------------PP 64 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEE-----------------------EEEECC-------------TT
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEE-----------------------EEEeCC-------------CC
Confidence 366889986 5666666665 48999999888631 111111 11
Q ss_pred ee--EEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 115 IN--KIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 115 v~--~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
.. .+++ . ++.++...-.++.+.++|..+.+.+..+..... .....++++.+
T Consensus 65 ~fgeGi~~--~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~------------------Gwglt~dg~~L------ 117 (243)
T 3mbr_X 65 YFGAGIVA--W-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE------------------GWALTSDDSHL------ 117 (243)
T ss_dssp CCEEEEEE--E-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSC------------------CCEEEECSSCE------
T ss_pred cceeEEEE--e-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC------------------ceEEeeCCCEE------
Confidence 22 2333 3 234555566899999999999998887766432 12334566655
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccc---cceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCcee
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHD---YHINSISNNSDGETFISA-DDLRINLWNLEISNQSF 268 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~ 268 (408)
+.+..++.|.++| ....+.. ..+.. ..+. ..++.+.+. +|++++.. .+..|.+.|.+ .++..
T Consensus 118 ------~vSdgs~~l~~iD-p~t~~~~---~~I~V--~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~-tG~V~ 183 (243)
T 3mbr_X 118 ------YMSDGTAVIRKLD-PDTLQQV---GSIKV--TAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPA-SGKVV 183 (243)
T ss_dssp ------EEECSSSEEEEEC-TTTCCEE---EEEEC--EETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTT-TCBEE
T ss_pred ------EEECCCCeEEEEe-CCCCeEE---EEEEE--ccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECC-CCCEE
Confidence 4445577888877 3222111 10110 1111 234556655 67666666 78899999999 56666
Q ss_pred eEeecCCCc--c----cCCcCCeEEEEEcCCCCceEEEEeC
Q 015363 269 NIVDVKPAN--M----EDLTEVITSAEFHPTHCNMLAYSSS 303 (408)
Q Consensus 269 ~~~~~~~~~--~----~~~~~~v~~~~~~p~~~~~l~s~~~ 303 (408)
..+++.... . .......+.|+++|++.+++++|-.
T Consensus 184 ~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 184 AWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 666643210 0 1122456899999988567777643
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.39 E-value=9.3e-05 Score=61.21 Aligned_cols=209 Identities=9% Similarity=-0.005 Sum_probs=119.3
Q ss_pred eeEEEEeecCCCcEEEEEeC--CCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 115 INKIRWCQSANSALYLLSTN--DKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
...+.|+|+ +.++++.+. ++.|++.|+.+++........... . ...+..++..+
T Consensus 23 ~~Gl~~~~d--g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~--------f--------geGi~~~g~~l------ 78 (266)
T 2iwa_A 23 TQGLVYAEN--DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY--------F--------GEGLTLLNEKL------ 78 (266)
T ss_dssp EEEEEECST--TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC--------C--------EEEEEEETTEE------
T ss_pred cccEEEeCC--CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc--------c--------eEEEEEeCCEE------
Confidence 578999643 655555543 689999999999988776543221 0 11222234443
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEe
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~ 271 (408)
.++.-.++.+.++| ... .+....+..+ ... ...+++|+..++++ .++.|.++|..+.+ ....+
T Consensus 79 -----yv~t~~~~~v~viD-~~t------~~v~~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~-v~~~I 142 (266)
T 2iwa_A 79 -----YQVVWLKNIGFIYD-RRT------LSNIKNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFK-LIKKH 142 (266)
T ss_dssp -----EEEETTCSEEEEEE-TTT------TEEEEEEECC-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCC-EEEEE
T ss_pred -----EEEEecCCEEEEEE-CCC------CcEEEEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCc-EEEEE
Confidence 24455678888888 322 1222222111 011 12355678777777 78899999998543 43333
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccC-CCCccccccccceeEEEEEc
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA-PGTRSFFTEIIASISDIKFA 350 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~~s 350 (408)
.+.. -...-..+..+.|. ++ .+++....++.|.+.|..+++.. ..+..... +.....-..-....+.++|+
T Consensus 143 ~Vg~--~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~----~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 143 NVKY--NGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLL----GWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp ECEE--TTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEE----EEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred EECC--CCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEE----EEEECCCcccccccccccccCceEEEEEc
Confidence 2210 00011236678888 77 77777667899999999999765 22221100 00000000001356899999
Q ss_pred cCCCEEE-EeCC-CeEEEEECCC
Q 015363 351 RNGRHIL-SRDY-MTLKLWDINM 371 (408)
Q Consensus 351 pdg~~l~-s~~d-~~v~~wd~~~ 371 (408)
|+++.|+ ++.. +.|...++..
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCCEEEEECCCCCeEEEEEEec
Confidence 9987555 5544 8998888875
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.37 E-value=0.00017 Score=62.18 Aligned_cols=266 Identities=9% Similarity=0.014 Sum_probs=133.3
Q ss_pred ceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccc-----c---ccc
Q 015363 37 IISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFD-----Y---LKS 108 (408)
Q Consensus 37 ~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~-----~---~~~ 108 (408)
...+++|+++|+++.++..++.|..|+..++... .+........ - ...
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~g~~~~~~ 75 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV------------------------DFAYASPYWNKAFCENSTDAEK 75 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE------------------------EEEESCTTCCHHHHTTCCCGGG
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE------------------------EEecccccccccccccccchhc
Confidence 3467889999998888888999999987654321 1110000000 0 000
Q ss_pred cccccceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCeee
Q 015363 109 LEIEEKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGCGE 187 (408)
Q Consensus 109 ~~~~~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~ 187 (408)
......+..+++.+. ++ .|.++...+.|..+|..+++........... ....+..++..+ +|....
T Consensus 76 ~~~~~~p~gi~~~~~-~g-~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~-----------~~~~p~~i~~d~~~G~l~v 142 (322)
T 2fp8_A 76 RPLCGRTYDISYNLQ-NN-QLYIVDCYYHLSVVGSEGGHATQLATSVDGV-----------PFKWLYAVTVDQRTGIVYF 142 (322)
T ss_dssp HHHHCCEEEEEEETT-TT-EEEEEETTTEEEEECTTCEECEEEESEETTE-----------ECSCEEEEEECTTTCCEEE
T ss_pred cccCCCCceEEEcCC-CC-cEEEEECCCCEEEEeCCCCEEEEecccCCCC-----------cccccceEEEecCCCEEEE
Confidence 001134788888531 35 4555555556888887765433322110000 001122466777 665431
Q ss_pred cccc--cccCc---cccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEe
Q 015363 188 RNFG--CASND---SSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWN 260 (408)
Q Consensus 188 ~~~~--~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd 260 (408)
.-.+ +.... .++.+...+.|..++ ..... ...+ .......+.++++|+++.|..+ ..+.|..|+
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~g~v~~~d-~~~~~-------~~~~-~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~ 213 (322)
T 2fp8_A 143 TDVSTLYDDRGVQQIMDTSDKTGRLIKYD-PSTKE-------TTLL-LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYW 213 (322)
T ss_dssp EESCSSCCTTCHHHHHHHTCCCEEEEEEE-TTTTE-------EEEE-EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ECCcccccccccceehcccCCCceEEEEe-CCCCE-------EEEe-ccCCccCcceEECCCCCEEEEEeCCCCeEEEEE
Confidence 1000 00000 001122345566655 21111 0110 0111335678999999866655 578999999
Q ss_pred CCCCCc-eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeC----------CCeEEEEEcCCCceeccccccccccc
Q 015363 261 LEISNQ-SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSS----------KGSIRLIDMRQSALCDTHSKLFEEQE 329 (408)
Q Consensus 261 ~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~ 329 (408)
+..... ....+. .+ .+ ...++++++| +++++... .+.|..+|.. ++.. ..+....
T Consensus 214 ~~~~~~~~~~~~~----~~---~g-P~gi~~d~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~----~~~~~~~ 279 (322)
T 2fp8_A 214 LEGPKKGTAEVLV----KI---PN-PGNIKRNADG-HFWVSSSEELDGNMHGRVDPKGIKFDEF-GNIL----EVIPLPP 279 (322)
T ss_dssp SSSTTTTCEEEEE----EC---SS-EEEEEECTTS-CEEEEEEEETTSSTTSCEEEEEEEECTT-SCEE----EEEECCT
T ss_pred CCCCcCCccceEE----eC---CC-CCCeEECCCC-CEEEEecCcccccccCCCccEEEEECCC-CCEE----EEEECCC
Confidence 873211 111111 01 22 6789999999 76666544 4678888864 4332 2222221
Q ss_pred CCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCC
Q 015363 330 APGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINM 371 (408)
Q Consensus 330 ~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~ 371 (408)
.. ....+..+++ .++++.++.. .+.|..+++..
T Consensus 280 g~--------~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 280 PF--------AGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TT--------TTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CC--------ccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 00 0123555666 4666555553 58999999864
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.35 E-value=4.9e-05 Score=65.70 Aligned_cols=186 Identities=10% Similarity=0.017 Sum_probs=106.3
Q ss_pred cEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCce
Q 015363 127 ALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSS 206 (408)
Q Consensus 127 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (408)
..+.+++.++.|..+|.. ++........... +. .+...+++.. +.++.++.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~--------~~-------~~~~~~~g~l-------------~vgt~~~~ 158 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAI--------YA-------TPIVSEDGTI-------------YVGSNDNY 158 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCC--------CS-------CCEECTTSCE-------------EEECTTSE
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCce--------ee-------eeEEcCCCEE-------------EEEcCCCE
Confidence 367788889999999988 6655444332110 11 2344445553 44566677
Q ss_pred eeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeE
Q 015363 207 LRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVIT 286 (408)
Q Consensus 207 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 286 (408)
|..++ .. +.....+ ......+.++...+++.+++.. +.|..+| .++...... ......+.
T Consensus 159 l~~~d-~~-------g~~~~~~-~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~--------~~~~~~~~ 218 (330)
T 3hxj_A 159 LYAIN-PD-------GTEKWRF-KTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNF--------YAGYWTVT 218 (330)
T ss_dssp EEEEC-TT-------SCEEEEE-ECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEE--------CCSSCCCS
T ss_pred EEEEC-CC-------CCEeEEE-ecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEE--------ccCCccee
Confidence 77776 22 1111111 2223445667777788766665 8899999 534433332 22234567
Q ss_pred EEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEE
Q 015363 287 SAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKL 366 (408)
Q Consensus 287 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~ 366 (408)
++...+++ . +..++.++.|..+|. ++... ..+.... ..+..+.+.+++.+.++..++.|..
T Consensus 219 ~~~~~~~g-~-l~v~t~~~gl~~~~~-~g~~~----~~~~~~~------------~~~~~~~~~~~g~l~v~t~~ggl~~ 279 (330)
T 3hxj_A 219 RPAISEDG-T-IYVTSLDGHLYAINP-DGTEK----WRFKTGK------------RIESSPVIGNTDTIYFGSYDGHLYA 279 (330)
T ss_dssp CCEECTTS-C-EEEEETTTEEEEECT-TSCEE----EEEECSS------------CCCSCCEECTTSCEEEECTTCEEEE
T ss_pred ceEECCCC-e-EEEEcCCCeEEEECC-CCCEe----EEeeCCC------------CccccceEcCCCeEEEecCCCCEEE
Confidence 78888887 4 455667788888874 34332 2222111 1223345566776665556788999
Q ss_pred EECCCCCCceeeeeec
Q 015363 367 WDINMDSGPVATFQVH 382 (408)
Q Consensus 367 wd~~~~~~~~~~~~~~ 382 (408)
+|. + ++.+..+...
T Consensus 280 ~d~-~-g~~~~~~~~~ 293 (330)
T 3hxj_A 280 INP-D-GTEKWNFETG 293 (330)
T ss_dssp ECT-T-SCEEEEEECS
T ss_pred ECC-C-CcEEEEEEcC
Confidence 996 3 5666665543
No 244
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.32 E-value=0.0015 Score=57.90 Aligned_cols=207 Identities=9% Similarity=-0.013 Sum_probs=116.5
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..+..++|.+. ++.++.+-...+.|..+++..+....+...... .+..+++.+.+..|
T Consensus 116 ~~~~gl~~d~~-~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~---------------~p~glavd~~~g~l------ 173 (386)
T 3v65_B 116 ENAIALDFHHR-RELVFWSDVTLDRILRANLNGSNVEEVVSTGLE---------------SPGGLAVDWVHDKL------ 173 (386)
T ss_dssp SCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCCEEEEECSSCS---------------CCCCEEEETTTTEE------
T ss_pred CccEEEEEecC-CCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC---------------CccEEEEEeCCCeE------
Confidence 34788999643 344444545778999999987765444332111 11146666655444
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cC-CeEEEEeCCCCCceee
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DD-LRINLWNLEISNQSFN 269 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d-~~i~iwd~~~~~~~~~ 269 (408)
+++-...+.|.+.+ +.. .....+........+.++++|.+..|..+ .. +.|..++.+ +.....
T Consensus 174 -----Y~~d~~~~~I~~~~-~dg-------~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~ 239 (386)
T 3v65_B 174 -----YWTDSGTSRIEVAN-LDG-------AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD-GSGRRI 239 (386)
T ss_dssp -----EEEETTTTEEEECB-TTS-------CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEE
T ss_pred -----EEEcCCCCeEEEEe-CCC-------CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC-CCCcEE
Confidence 23334455666555 221 11111122233557899999977766655 44 788888887 332222
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
+ ....-.....|+++|++..++++-+..+.|..+|+..... ..+.... ......+++
T Consensus 240 ~-------~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-----~~~~~~~-----------~~~P~giav 296 (386)
T 3v65_B 240 I-------ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-----KAVISQG-----------LPHPFAITV 296 (386)
T ss_dssp E-------ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-----EEEECSS-----------CSSEEEEEE
T ss_pred E-------EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-----EEEEECC-----------CCCceEEEE
Confidence 2 1222345689999987635555556678899999875422 1111110 124567777
Q ss_pred ccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 350 ARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 350 spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
. .+.++++-. .+.|..++..+ ++.++.+.
T Consensus 297 ~-~~~ly~td~~~~~V~~~~~~~-G~~~~~i~ 326 (386)
T 3v65_B 297 F-EDSLYWTDWHTKSINSANKFT-GKNQEIIR 326 (386)
T ss_dssp E-TTEEEEEETTTTEEEEEETTT-CCSCEEEE
T ss_pred E-CCEEEEeeCCCCeEEEEECCC-CcceEEEc
Confidence 3 444444543 48898888554 55555554
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.32 E-value=9.1e-05 Score=60.58 Aligned_cols=198 Identities=8% Similarity=0.026 Sum_probs=111.6
Q ss_pred cceeEEEEeecCCCcEEEEEeCCC--eEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDK--TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
.-...+.|+ ++.++.+++.+| .|+++|+.+++........... + .....+++..+
T Consensus 43 ~ftqGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~---------F-------geGit~~g~~l---- 99 (262)
T 3nol_A 43 AFTEGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY---------F-------GEGISDWKDKI---- 99 (262)
T ss_dssp CEEEEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC---------C-------EEEEEEETTEE----
T ss_pred cccceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc---------c-------eeEEEEeCCEE----
Confidence 335788885 366777777776 9999999999988776653221 1 12223334444
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
....-.++.+.+|| ... .+.+..+.... ....+++++..|+.+ .++.|.++|..+.+ ...
T Consensus 100 -------y~ltw~~~~v~v~D-~~t------~~~~~ti~~~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~-v~~ 160 (262)
T 3nol_A 100 -------VGLTWKNGLGFVWN-IRN------LRQVRSFNYDG----EGWGLTHNDQYLIMSDGTPVLRFLDPESLT-PVR 160 (262)
T ss_dssp -------EEEESSSSEEEEEE-TTT------CCEEEEEECSS----CCCCEEECSSCEEECCSSSEEEEECTTTCS-EEE
T ss_pred -------EEEEeeCCEEEEEE-Ccc------CcEEEEEECCC----CceEEecCCCEEEEECCCCeEEEEcCCCCe-EEE
Confidence 23345677888888 322 12222221111 112333567777777 67889999998544 444
Q ss_pred EeecCCCcccCCc-CCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEE
Q 015363 270 IVDVKPANMEDLT-EVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIK 348 (408)
Q Consensus 270 ~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 348 (408)
.+.+. ..+.. ..+..+.|. +| .+++..-.+..|.+.|.++++.. ..+...........-..-....+.|+
T Consensus 161 ~I~V~---~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~V~----~~Id~~~L~~~~~~~~~~~~vlNGIA 231 (262)
T 3nol_A 161 TITVT---AHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGKVT----GIIDLNGILAEAGPLPSPIDVLNGIA 231 (262)
T ss_dssp EEECE---ETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCBEE----EEEECTTGGGGSCSCCSSCCCEEEEE
T ss_pred EEEec---cCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCCCcEE----EEEECCcCccccccccCcCCceEEEE
Confidence 33321 11111 334567776 67 77776667889999999999765 22221100000000000013568999
Q ss_pred EccCCCEE-EEeCC
Q 015363 349 FARNGRHI-LSRDY 361 (408)
Q Consensus 349 ~spdg~~l-~s~~d 361 (408)
|+|+++.| ++|-.
T Consensus 232 ~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 232 WDKEHHRLFVTGKL 245 (262)
T ss_dssp EETTTTEEEEEETT
T ss_pred EcCCCCEEEEECCC
Confidence 99976655 55643
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.31 E-value=0.00031 Score=60.13 Aligned_cols=232 Identities=11% Similarity=0.076 Sum_probs=123.0
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
.....++|+++|+++++-..++.|..|+.++... ..+.. . ..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~------------------------~~~~~-~------------~~p 74 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ------------------------IHATV-E------------GKV 74 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE------------------------EEEEC-S------------SEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE------------------------EEEeC-C------------CCc
Confidence 4567899999999777766788998888654311 11111 1 347
Q ss_pred eEEEEeecCCCcEEEEEeC-CC-eEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 116 NKIRWCQSANSALYLLSTN-DK-TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~~-d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
..+++. ++|.++++... ++ .|..++..+++........... ... .++..+++..+
T Consensus 75 ~gia~~--~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~-------~~~-------g~~~~~~~~~~------- 131 (306)
T 2p4o_A 75 SGLAFT--SNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI-------FLN-------GITPLSDTQYL------- 131 (306)
T ss_dssp EEEEEC--TTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS-------CEE-------EEEESSSSEEE-------
T ss_pred eeEEEc--CCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcc-------ccC-------cccccCCCcEE-------
Confidence 888985 55776555433 22 4666777777765443321100 000 12222222221
Q ss_pred cCccccCCCCCceeeeceeeecccccc---ccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCce-
Q 015363 194 SNDSSFPPGGVSSLRLPVVVTSQETNL---VAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQS- 267 (408)
Q Consensus 194 ~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~- 267 (408)
++....+.|..+| ........ ............-...+.+ +|+++.|..+ ..++|..|++...+..
T Consensus 132 -----v~d~~~g~i~~~d-~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~ 203 (306)
T 2p4o_A 132 -----TADSYRGAIWLID-VVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG 203 (306)
T ss_dssp -----EEETTTTEEEEEE-TTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC
T ss_pred -----EEECCCCeEEEEe-CCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC
Confidence 3333455555555 21100000 0000000001111234555 7888777665 6889999998742221
Q ss_pred -eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEE
Q 015363 268 -FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 268 -~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
...+ .. ......++++++| +++++....+.|.++|.. ++... +..+... .....+
T Consensus 204 ~~~~~-------~~-~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~-G~~~~--~~~~~~~------------~~~p~~ 259 (306)
T 2p4o_A 204 EPEIF-------VE-QTNIDDFAFDVEG-NLYGATHIYNSVVRIAPD-RSTTI--IAQAEQG------------VIGSTA 259 (306)
T ss_dssp CCEEE-------EE-SCCCSSEEEBTTC-CEEEECBTTCCEEEECTT-CCEEE--EECGGGT------------CTTEEE
T ss_pred ccEEE-------ec-cCCCCCeEECCCC-CEEEEeCCCCeEEEECCC-CCEEE--Eeecccc------------cCCceE
Confidence 1111 00 1234568999999 877777778899999975 43310 0111111 135789
Q ss_pred EEEc---cCCCEEEEe
Q 015363 347 IKFA---RNGRHILSR 359 (408)
Q Consensus 347 ~~~s---pdg~~l~s~ 359 (408)
++|. ||+..|+.+
T Consensus 260 ~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 260 VAFGQTEGDCTAIYVV 275 (306)
T ss_dssp EEECCSTTTTTEEEEE
T ss_pred EEEecccCCCCEEEEE
Confidence 9998 887776654
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.27 E-value=0.00012 Score=63.21 Aligned_cols=186 Identities=12% Similarity=0.041 Sum_probs=104.0
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
+.++.. ++++ .+..++.++.|..+|.. ++........... +. .+...+++..
T Consensus 139 ~~~~~~--~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~--------~~-------~~~~d~~g~l--------- 190 (330)
T 3hxj_A 139 YATPIV--SEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAI--------TS-------AASIGKDGTI--------- 190 (330)
T ss_dssp CSCCEE--CTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCC--------CS-------CCEECTTCCE---------
T ss_pred eeeeEE--cCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCc--------ee-------eeEEcCCCEE---------
Confidence 444444 3345 46677888999999998 7665544432111 11 2334444543
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecC
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVK 274 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~ 274 (408)
+.++ +.+..++ .. +...... ......+.++...+++.+++...++.|..+|.. +..... +.
T Consensus 191 ----~v~t--~~l~~~d-~~-------g~~~~~~-~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~-g~~~~~-~~-- 251 (330)
T 3hxj_A 191 ----YFGS--DKVYAIN-PD-------GTEKWNF-YAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD-GTEKWR-FK-- 251 (330)
T ss_dssp ----EEES--SSEEEEC-TT-------SCEEEEE-CCSSCCCSCCEECTTSCEEEEETTTEEEEECTT-SCEEEE-EE--
T ss_pred ----EEEe--CEEEEEC-CC-------CcEEEEE-ccCCcceeceEECCCCeEEEEcCCCeEEEECCC-CCEeEE-ee--
Confidence 2222 4455544 11 1111111 222345677788888877776677888888754 333322 21
Q ss_pred CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 275 PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 275 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
.....+..+.+.+++ .|..++.++.|..+|. +++.. ..+... ...+.++...++|+
T Consensus 252 -----~~~~~~~~~~~~~~g--~l~v~t~~ggl~~~d~-~g~~~----~~~~~~------------~~~~~~~~~d~~g~ 307 (330)
T 3hxj_A 252 -----TGKRIESSPVIGNTD--TIYFGSYDGHLYAINP-DGTEK----WNFETG------------SWIIATPVIDENGT 307 (330)
T ss_dssp -----CSSCCCSCCEECTTS--CEEEECTTCEEEEECT-TSCEE----EEEECS------------SCCCSCCEECTTCC
T ss_pred -----CCCCccccceEcCCC--eEEEecCCCCEEEECC-CCcEE----EEEEcC------------CccccceEEcCCCE
Confidence 112223345566666 4666778889999996 55433 222211 13456677778888
Q ss_pred EEEEeCCCeEEEEECCC
Q 015363 355 HILSRDYMTLKLWDINM 371 (408)
Q Consensus 355 ~l~s~~d~~v~~wd~~~ 371 (408)
+.+.+.+|.+++.....
T Consensus 308 l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 308 IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EEEECTTSCEEEEEC--
T ss_pred EEEEcCCCeEEEEeccc
Confidence 87777789999988764
No 248
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.25 E-value=0.0019 Score=56.30 Aligned_cols=207 Identities=9% Similarity=-0.014 Sum_probs=115.2
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
..+..++|.+. ++.++.+-...+.|..+++..+....+...... .+..+++.+.+..+
T Consensus 73 ~~~~~l~~d~~-~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~---------------~p~glavd~~~g~l------ 130 (349)
T 3v64_C 73 ENAIALDFHHR-RELVFWSDVTLDRILRANLNGSNVEEVVSTGLE---------------SPGGLAVDWVHDKL------ 130 (349)
T ss_dssp SCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCSCEEEECSSCS---------------CCCEEEEETTTTEE------
T ss_pred CceEEEEEecc-ccEEEEEeccCCceEEEecCCCCceEEEeCCCC---------------CccEEEEecCCCeE------
Confidence 34788999643 333444445778899999887654443322111 11146666655444
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cC-CeEEEEeCCCCCceee
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DD-LRINLWNLEISNQSFN 269 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d-~~i~iwd~~~~~~~~~ 269 (408)
+++-...+.|.+.+ +... ....+........+.++++|.+..|..+ .. +.|..++++ +.....
T Consensus 131 -----y~~d~~~~~I~~~~-~dG~-------~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~ 196 (349)
T 3v64_C 131 -----YWTDSGTSRIEVAN-LDGA-------HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD-GSGRRI 196 (349)
T ss_dssp -----EEEETTTTEEEEEE-TTSC-------SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEE
T ss_pred -----EEEcCCCCeEEEEc-CCCC-------ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC-CCCcEE
Confidence 24444456666655 2211 1112122233457899999976666555 44 788888887 322222
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
+ ....-.....++++|++..++++-...+.|..+|+..... ..+.... ......+++
T Consensus 197 ~-------~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-----~~~~~~~-----------~~~P~giav 253 (349)
T 3v64_C 197 I-------ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-----KAVISQG-----------LPHPFAITV 253 (349)
T ss_dssp S-------CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEECSS-----------CSSEEEEEE
T ss_pred E-------EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-----EEEEeCC-----------CCCceEEEE
Confidence 1 1222345689999987735555555678999999875432 1111110 123566777
Q ss_pred ccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 350 ARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 350 spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
. .+.+.++-. .+.|..++..+ ++.+..+.
T Consensus 254 ~-~~~ly~td~~~~~V~~~~~~~-G~~~~~i~ 283 (349)
T 3v64_C 254 F-EDSLYWTDWHTKSINSANKFT-GKNQEIIR 283 (349)
T ss_dssp E-TTEEEEEETTTTEEEEEETTT-CCSCEEEE
T ss_pred E-CCEEEEecCCCCeEEEEEccC-CCccEEec
Confidence 3 444444443 48888888554 45555443
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.25 E-value=0.0045 Score=60.58 Aligned_cols=271 Identities=11% Similarity=0.087 Sum_probs=148.0
Q ss_pred ccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
...|.++...++|. |-.|+.++-|..|+..++... .+......-. ..+ ....
T Consensus 356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~------------------------~~~~~~~~~~--~~l-~~~~ 407 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFT------------------------SYTLQEDESA--RGI-GSNN 407 (795)
T ss_dssp CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEE------------------------EECCC--------CC-SCSC
T ss_pred CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEE------------------------EEecCCCCcc--cCC-CCcc
Confidence 45699999998887 555777777888887654321 1110000000 000 0044
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
|.++.. +.+|.+|..|+.++-|..+|..+++........ +. .+...+. ++...++|...
T Consensus 408 v~~i~~--d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~--~~--l~~~~v~-------~i~~d~~g~lw-------- 466 (795)
T 4a2l_A 408 IKAVYV--DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRN--SQ--LVNENVY-------AILPDGEGNLW-------- 466 (795)
T ss_dssp EEEEEE--ETTTTEEEEEETTTEEEEEETTTCCEEEECTTT--SC--CSCSCEE-------EEEECSSSCEE--------
T ss_pred EEEEEE--cCCCCEEEEEeCcCceeEEeCCCCcEEEeecCC--CC--cCCCeeE-------EEEECCCCCEE--------
Confidence 888877 455764777888778999999888765543211 00 1122343 45556666643
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecC
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVK 274 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~ 274 (408)
.++. +-+..|+ ............ .....-....|.++...++|.+.+... +.|..||..+ ... .. ...
T Consensus 467 -----igt~-~Gl~~~~-~~~~~~~~~~~~-~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~-~~~-~~-~~~ 534 (795)
T 4a2l_A 467 -----LGTL-SALVRFN-PEQRSFTTIEKE-KDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEG-LDI-QK-ASI 534 (795)
T ss_dssp -----EEES-SCEEEEE-TTTTEEEECCBC-TTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEET-TEE-EE-CCC
T ss_pred -----EEec-CceeEEe-CCCCeEEEcccc-ccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCC-CeE-EE-ecC
Confidence 2333 3355555 211100000000 000011235689999999998777666 5688888873 332 21 100
Q ss_pred CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 275 PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 275 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
..........|.++...++| .+.++ +.. -|..||..+++.. .+..... +. ...|.++...++|.
T Consensus 535 ~~~~~l~~~~i~~i~~d~~g-~lWig-T~~-Gl~~~d~~~~~~~-----~~~~~~g------l~--~~~i~~i~~d~~g~ 598 (795)
T 4a2l_A 535 LPVSNVTKLFTNCIYEASNG-IIWVG-TRE-GFYCFNEKDKQIK-----RYNTTNG------LP--NNVVYGILEDSFGR 598 (795)
T ss_dssp SCSCGGGGSCEEEEEECTTS-CEEEE-ESS-CEEEEETTTTEEE-----EECGGGT------CS--CSCEEEEEECTTSC
T ss_pred CCCCCCCCCeeEEEEECCCC-CEEEE-eCC-CceeECCCCCcEE-----EeCCCCC------Cc--hhheEEEEECCCCC
Confidence 00011234578999999998 65544 444 5788898766431 1111100 00 24588899999998
Q ss_pred EEEEeCCCeEEEEECCCCCCceeeeeecccc
Q 015363 355 HILSRDYMTLKLWDINMDSGPVATFQVHEHL 385 (408)
Q Consensus 355 ~l~s~~d~~v~~wd~~~~~~~~~~~~~~~~~ 385 (408)
+.+++. +.|..||..+ ..++.+....+.
T Consensus 599 lWi~t~-~Gl~~~~~~~--~~~~~~~~~dGl 626 (795)
T 4a2l_A 599 LWLSTN-RGISCFNPET--EKFRNFTESDGL 626 (795)
T ss_dssp EEEEET-TEEEEEETTT--TEEEEECGGGTC
T ss_pred EEEEcC-CceEEEcCCC--CcEEEcCCcCCC
Confidence 777775 4677888864 445566555544
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.25 E-value=0.00018 Score=68.80 Aligned_cols=55 Identities=7% Similarity=0.168 Sum_probs=38.3
Q ss_pred CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee
Q 015363 254 LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 254 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
+.|..||+.+++...+. + +...+....+...+ .+++.++.|+.+++||.++++.+
T Consensus 457 g~l~A~D~~tG~~~W~~-~--------~~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSV-E--------HVSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEEEEEETTTTEEEEEE-E--------ESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEE
T ss_pred cEEEEEeCCCCcEEeec-C--------CCCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCcee
Confidence 67999999865544432 1 12223334455666 67888899999999999999765
No 251
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.22 E-value=5.9e-05 Score=69.16 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=56.7
Q ss_pred CeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee-----c---ccccccccccCCCCccccccccceeEEEEEccCCCE
Q 015363 284 VITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC-----D---THSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRH 355 (408)
Q Consensus 284 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~ 355 (408)
...++.++|||..+++++..+.+|.++|+.+.+.. . ......+. ......++|+|+| +
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-------------G~gP~h~aF~~dG-~ 343 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-------------GLGPLHTAFDGRG-N 343 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-------------CSCEEEEEECTTS-E
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-------------CCCcceEEECCCC-e
Confidence 34679999999445555556899999999865210 0 00011111 1457899999999 6
Q ss_pred EEEe-C-CCeEEEEECCCC---------CCceeeeeecc
Q 015363 356 ILSR-D-YMTLKLWDINMD---------SGPVATFQVHE 383 (408)
Q Consensus 356 l~s~-~-d~~v~~wd~~~~---------~~~~~~~~~~~ 383 (408)
+++. . |+.|..||+++. .+.+.++..|.
T Consensus 344 aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~y 382 (595)
T 1fwx_A 344 AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHY 382 (595)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSS
T ss_pred EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccc
Confidence 6665 3 699999999751 35666666653
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.17 E-value=0.00075 Score=54.66 Aligned_cols=198 Identities=10% Similarity=0.035 Sum_probs=110.9
Q ss_pred cceeEEEEeecCCCcEEEEEeCCC--eEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDK--TIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
.-...+.|.+ +.++.+.+.+| .|+.+|+.+++........... + .......+..+
T Consensus 21 ~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~---------f-------geGi~~~~~~l---- 77 (243)
T 3mbr_X 21 AFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY---------F-------GAGIVAWRDRL---- 77 (243)
T ss_dssp CCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC---------C-------EEEEEEETTEE----
T ss_pred cccccEEEEC---CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc---------c-------eeEEEEeCCEE----
Confidence 5577899952 55666767654 9999999999988877654321 1 11222233333
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceee
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~ 269 (408)
....-.++.+.+|| ... .+.+..+... ..-..+ .+++..|+.+ .++.|.++|..+.. ...
T Consensus 78 -------y~ltw~~~~v~v~D-~~t------l~~~~ti~~~--~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~-~~~ 138 (243)
T 3mbr_X 78 -------IQLTWRNHEGFVYD-LAT------LTPRARFRYP--GEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQ-QVG 138 (243)
T ss_dssp -------EEEESSSSEEEEEE-TTT------TEEEEEEECS--SCCCEE--EECSSCEEEECSSSEEEEECTTTCC-EEE
T ss_pred -------EEEEeeCCEEEEEE-CCc------CcEEEEEeCC--CCceEE--eeCCCEEEEECCCCeEEEEeCCCCe-EEE
Confidence 23345678888888 322 2222222111 111233 3567777777 78899999998543 444
Q ss_pred EeecCCCcccCC-cCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccC-CCCccccccccceeEEE
Q 015363 270 IVDVKPANMEDL-TEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA-PGTRSFFTEIIASISDI 347 (408)
Q Consensus 270 ~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~ 347 (408)
.+.+.. .+. -..++.+.|. +| .+++..-.+..|.+.|.++++.. ..+..... +.....-..-....+.|
T Consensus 139 ~I~V~~---~g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~V~----~~idl~~l~~~~~~~~~~~~~vlNGI 209 (243)
T 3mbr_X 139 SIKVTA---GGRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPASGKVV----AWIDLQALVPDADALTDSTNDVLNGI 209 (243)
T ss_dssp EEECEE---TTEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCBEE----EEEECGGGSTTTTSCCCTTSSCEEEE
T ss_pred EEEEcc---CCcccccceeeEEe-CC-EEEEEECCCCeEEEEECCCCCEE----EEEECCcCccccccccCCcCCceEEE
Confidence 433211 110 1335567766 66 67766656889999999999765 22221100 00000000012457899
Q ss_pred EEccCCC-EEEEeCC
Q 015363 348 KFARNGR-HILSRDY 361 (408)
Q Consensus 348 ~~spdg~-~l~s~~d 361 (408)
+++|+++ ++++|-.
T Consensus 210 A~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 210 AFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEETTTTEEEEEETT
T ss_pred EEcCCCCEEEEECCC
Confidence 9999755 5556644
No 253
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.16 E-value=0.00027 Score=67.77 Aligned_cols=80 Identities=6% Similarity=0.166 Sum_probs=48.9
Q ss_pred CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCC
Q 015363 254 LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGT 333 (408)
Q Consensus 254 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 333 (408)
+.|..||+.+++...+. + .+ .....-.+...+ .++++++.|+.++.||.++++.+ ..++....
T Consensus 455 g~l~A~D~~tG~~~W~~-~-------~~-~~~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~~l----w~~~~~~~--- 517 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEV-P-------YV-TIFNGGTLSTAG-NLVFEGSADGRVIAYAADTGEKL----WEQPAASG--- 517 (689)
T ss_dssp EEEEEEETTTTEEEEEE-E-------ES-SSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEE----EEEECSSC---
T ss_pred eeEEEEECCCCCeEeEc-c-------CC-CCccCccceECC-CEEEEECCCCcEEEEECCCCccc----eeeeCCCC---
Confidence 77889999865544442 1 11 112222444556 68888999999999999999765 33333210
Q ss_pred ccccccccceeEEEEEccCCCEEEE
Q 015363 334 RSFFTEIIASISDIKFARNGRHILS 358 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg~~l~s 358 (408)
..-.-+.|..+|+..++
T Consensus 518 --------~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 518 --------VMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp --------CCSCCEEEEETTEEEEE
T ss_pred --------cccCceEEEECCEEEEE
Confidence 11123667788875543
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.13 E-value=0.0082 Score=58.73 Aligned_cols=271 Identities=10% Similarity=0.065 Sum_probs=145.9
Q ss_pred ccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
...|.++...++|. |-.|+.++-|..|+..+.... .+...... ..+ ....
T Consensus 309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~------------------------~~~~~~~~----~~l-~~~~ 358 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFK------------------------NIRNIPYK----NSL-SDNV 358 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSE------------------------EECCCTTS----SSC-SCSS
T ss_pred CCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccce------------------------EEcCCCCC----CCC-CCCe
Confidence 35799999999888 556777777888886544310 01000000 000 0144
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
|.++.. +.+|. |-.|+.++-|..|+..+++..........+........|. ++...++|..+
T Consensus 359 V~~i~~--d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-------~i~~d~~g~~l-------- 420 (795)
T 4a2l_A 359 VSCIVE--DKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-------AVYVDEKKSLV-------- 420 (795)
T ss_dssp EEEEEE--CTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-------EEEEETTTTEE--------
T ss_pred eEEEEE--CCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-------EEEEcCCCCEE--------
Confidence 888877 55664 5567888789999988876554432110000001122343 45666667623
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecC
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVK 274 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~ 274 (408)
..|+.++-|..++ ............ . .......|.++...+++++.+... +.+.+||..+ +.... +...
T Consensus 421 ----Wigt~~~Gl~~~d-~~~~~~~~~~~~-~--~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~-~~~~~-~~~~ 489 (795)
T 4a2l_A 421 ----YIGTHAGGLSILH-RNSGQVENFNQR-N--SQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQ-RSFTT-IEKE 489 (795)
T ss_dssp ----EEEETTTEEEEEE-TTTCCEEEECTT-T--SCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTT-TEEEE-CCBC
T ss_pred ----EEEeCcCceeEEe-CCCCcEEEeecC-C--CCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCC-CeEEE-cccc
Confidence 5555555566666 221110000000 0 002235689999999888777666 4588899873 32222 1100
Q ss_pred CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 275 PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 275 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
...-.-....|.++...++| .+.+. +. +-|..||..++.. . ....... -......|.++...++|.
T Consensus 490 ~~~~~~~~~~i~~i~~d~~g-~lWig-t~-~Gl~~~~~~~~~~--~-~~~~~~~--------~~l~~~~i~~i~~d~~g~ 555 (795)
T 4a2l_A 490 KDGTPVVSKQITTLFRDSHK-RLWIG-GE-EGLSVFKQEGLDI--Q-KASILPV--------SNVTKLFTNCIYEASNGI 555 (795)
T ss_dssp TTCCBCCCCCEEEEEECTTC-CEEEE-ES-SCEEEEEEETTEE--E-ECCCSCS--------CGGGGSCEEEEEECTTSC
T ss_pred ccccccCCceEEEEEECCCC-CEEEE-eC-CceEEEeCCCCeE--E-EecCCCC--------CCCCCCeeEEEEECCCCC
Confidence 00001123568999999998 65554 44 4588888876532 0 0000000 001135789999999998
Q ss_pred EEEEeCCCeEEEEECCCCCCceeeeee
Q 015363 355 HILSRDYMTLKLWDINMDSGPVATFQV 381 (408)
Q Consensus 355 ~l~s~~d~~v~~wd~~~~~~~~~~~~~ 381 (408)
+.++... .|..||..+ ..+..+..
T Consensus 556 lWigT~~-Gl~~~d~~~--~~~~~~~~ 579 (795)
T 4a2l_A 556 IWVGTRE-GFYCFNEKD--KQIKRYNT 579 (795)
T ss_dssp EEEEESS-CEEEEETTT--TEEEEECG
T ss_pred EEEEeCC-CceeECCCC--CcEEEeCC
Confidence 7766654 688888865 34444443
No 255
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.03 E-value=0.0027 Score=56.15 Aligned_cols=184 Identities=9% Similarity=0.051 Sum_probs=105.4
Q ss_pred EEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCcee
Q 015363 128 LYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSL 207 (408)
Q Consensus 128 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 207 (408)
+|+.+ ....|+..++............. .+..++|.+.+..+ +++-...+.|
T Consensus 89 ~l~~~-~~~~I~~i~~~~~~~~~~~~~~~----------------~~~gl~~d~~~~~l-----------y~~D~~~~~I 140 (386)
T 3v65_B 89 VLLFA-NRIDIRQVLPHRSEYTLLLNNLE----------------NAIALDFHHRRELV-----------FWSDVTLDRI 140 (386)
T ss_dssp EEEEE-CBSCEEEECTTSCCCEEEECSCS----------------CEEEEEEETTTTEE-----------EEEETTTTEE
T ss_pred eeEee-cCccceeeccCCCcEEEEecCCC----------------ccEEEEEecCCCeE-----------EEEeCCCCcE
Confidence 44444 34568888887765544433211 12267888766555 2444455667
Q ss_pred eeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCe
Q 015363 208 RLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVI 285 (408)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 285 (408)
..++ ..... ...+..........+++++.+..|..+ ..+.|.+.+++ +.....+ +.......
T Consensus 141 ~r~~-~~g~~-------~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d-g~~~~~l-------~~~~l~~P 204 (386)
T 3v65_B 141 LRAN-LNGSN-------VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKVL-------LWQSLEKP 204 (386)
T ss_dssp EEEE-TTSCC-------EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT-SCSCEEE-------ECSSCSCE
T ss_pred EEEe-cCCCC-------cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC-CCceEEe-------ecCCCCCC
Confidence 6666 22211 111111122345678888766555544 67889888887 3322222 12223456
Q ss_pred EEEEEcCCCCceEEEEeCC-CeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe-C-CC
Q 015363 286 TSAEFHPTHCNMLAYSSSK-GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-D-YM 362 (408)
Q Consensus 286 ~~~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~-d~ 362 (408)
..++++|.+..++.+-... +.|..+++..... ..+.... ......|+|+|++..|+.+ . .+
T Consensus 205 ~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-----~~~~~~~-----------~~~PnGlavd~~~~~lY~aD~~~~ 268 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-----RIIADTH-----------LFWPNGLTIDYAGRRMYWVDAKHH 268 (386)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----EEEECSS-----------CSCEEEEEEEGGGTEEEEEETTTT
T ss_pred cEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-----EEEEECC-----------CCCeeeEEEeCCCCEEEEEECCCC
Confidence 8999999773555554445 7888888875432 1111110 1356899999987777766 3 38
Q ss_pred eEEEEECCC
Q 015363 363 TLKLWDINM 371 (408)
Q Consensus 363 ~v~~wd~~~ 371 (408)
.|..+|++.
T Consensus 269 ~I~~~d~dG 277 (386)
T 3v65_B 269 VIERANLDG 277 (386)
T ss_dssp EEEEECTTS
T ss_pred EEEEEeCCC
Confidence 899999863
No 256
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.01 E-value=0.0058 Score=59.65 Aligned_cols=264 Identities=10% Similarity=0.080 Sum_probs=140.9
Q ss_pred ccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
...|.++...++|. |-.|+.++-|..++....... .+...... .....+ ....
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~------------------------~~~~~~~~-~~~~~l-~~~~ 364 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFH------------------------TWSYSPTQ-MNESSL-SNKV 364 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCE------------------------EEC----C-CCSSCC-SSSC
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcce------------------------eeccCccc-cccCCC-CCcc
Confidence 46799999998887 556676677888886544321 11000000 000000 0144
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
|.++.. +.+|. |-.|+.++-|..++..++....... + ...+...|. ++...++|..
T Consensus 365 v~~i~~--d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~----~-~~~~~~~v~-------~i~~d~~g~l--------- 420 (781)
T 3v9f_A 365 VSSVCD--DGQGK-LWIGTDGGGINVFENGKRVAIYNKE----N-RELLSNSVL-------CSLKDSEGNL--------- 420 (781)
T ss_dssp EEEEEE--CTTSC-EEEEEBSSCEEEEETTEEEEECC----------CCCSBEE-------EEEECTTSCE---------
T ss_pred eEEEEE--cCCCC-EEEEeCCCcEEEEECCCCeEEEccC----C-CCCCCcceE-------EEEECCCCCE---------
Confidence 888877 45564 5567766778888887654332210 0 011122343 4555555554
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeec--cccccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEee
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYA--HAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVD 272 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~ 272 (408)
..++.++-+..++ ..... .+.+. ......|.++...+++.+.+... +.|..||..+. .......
T Consensus 421 ----Wigt~~~Gl~~~~-~~~~~-------~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~-~~~~~~~ 486 (781)
T 3v9f_A 421 ----WFGTYLGNISYYN-TRLKK-------FQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASK-KVIHHYD 486 (781)
T ss_dssp ----EEEETTEEEEEEC-SSSCE-------EEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSS-SCCEEEC
T ss_pred ----EEEeccCCEEEEc-CCCCc-------EEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCC-eEEeccc
Confidence 4445545566555 21110 01110 11235688999888887666556 56888998733 2222211
Q ss_pred cCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccC
Q 015363 273 VKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARN 352 (408)
Q Consensus 273 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spd 352 (408)
... .......|.++...++| .+.+ |+.++-|..||..+++.. .+..... + ....|.++...++
T Consensus 487 ~~~--~~~~~~~i~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~~~~~-----~~~~~~~------l--~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 487 TSN--SQLLENFVRSIAQDSEG-RFWI-GTFGGGVGIYTPDMQLVR-----KFNQYEG------F--CSNTINQIYRSSK 549 (781)
T ss_dssp TTT--SSCSCSCEEEEEECTTC-CEEE-EESSSCEEEECTTCCEEE-----EECTTTT------C--SCSCEEEEEECTT
T ss_pred Ccc--cccccceeEEEEEcCCC-CEEE-EEcCCCEEEEeCCCCeEE-----EccCCCC------C--CCCeeEEEEECCC
Confidence 100 01124668999999998 5544 444344777888765431 1211100 0 0246899999999
Q ss_pred CCEEEEeCCCeEEEEECCCCCCceeeeeec
Q 015363 353 GRHILSRDYMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 353 g~~l~s~~d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
|.+.++...|-|..||..+ ..+..+...
T Consensus 550 g~lWi~T~~Glv~~~d~~~--~~~~~~~~~ 577 (781)
T 3v9f_A 550 GQMWLATGEGLVCFPSARN--FDYQVFQRK 577 (781)
T ss_dssp SCEEEEETTEEEEESCTTT--CCCEEECGG
T ss_pred CCEEEEECCCceEEECCCC--CcEEEcccc
Confidence 9877766655548888865 234444433
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.01 E-value=0.0047 Score=55.46 Aligned_cols=254 Identities=10% Similarity=0.064 Sum_probs=126.3
Q ss_pred cceEEEEECC-CCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 36 DIISAIEFDK-SGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 36 ~~V~~~~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
.....|+++| ++..|+.+...+.|+.+|.+++.. ..+.... ..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v------------------------~~~~~~~------------~~ 180 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV------------------------STVYSGL------------SK 180 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE------------------------EEEECCC------------SC
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE------------------------EEEecCC------------CC
Confidence 3457889998 455566665557888888776532 1221111 44
Q ss_pred eeEEEEeecCCCcEEEEEeC-CC----eEEEEEcCCCcEE--EEeccCCCCcccCCCCCeEeecCCceeeEEcc-CCCee
Q 015363 115 INKIRWCQSANSALYLLSTN-DK----TIKLWKVQEKKVK--KVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA-NGGCG 186 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~-d~----~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l 186 (408)
...|+|. ++|.+|+++.. ++ .+.+.+.. +... ..+.. ...+..+++.| +|...
T Consensus 181 P~~ia~d--~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~----------------~~~p~giavdp~~g~ly 241 (430)
T 3tc9_A 181 VRTICWT--HEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK----------------GQNCNGAETHPINGELY 241 (430)
T ss_dssp EEEEEEC--TTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE----------------CSSCCCEEECTTTCCEE
T ss_pred cceEEEe--CCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc----------------CCCceEEEEeCCCCEEE
Confidence 7889995 45775655543 21 23333332 2211 11111 11122577888 55543
Q ss_pred ecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCC
Q 015363 187 ERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEIS 264 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~ 264 (408)
++-...+.|..++ ....... ...........+.++|+|++++|..+ ..+.|..++.+..
T Consensus 242 ------------v~d~~~~~V~~~~-~~~~~~~------~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~ 302 (430)
T 3tc9_A 242 ------------FNSWNAGQVFRYD-FTTQETT------PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWK 302 (430)
T ss_dssp ------------EEETTTTEEEEEE-TTTTEEE------EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred ------------EEECCCCEEEEEE-CCCCcEE------EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcc
Confidence 4444566777766 3211110 11111122456789999999955554 6889999887632
Q ss_pred Ccee----eEeec-CCCccc------CCcCCeE-EEEEc--------CCCCceEEEEeCCCeEEEEEcCCCceecccccc
Q 015363 265 NQSF----NIVDV-KPANME------DLTEVIT-SAEFH--------PTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKL 324 (408)
Q Consensus 265 ~~~~----~~~~~-~~~~~~------~~~~~v~-~~~~~--------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 324 (408)
...+ .+... ....+. ..-.... .+... +++ .++++=...+.|+.++. .+.. ..
T Consensus 303 ~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~~-~G~v-----~~ 375 (430)
T 3tc9_A 303 TKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILTP-QGRV-----TT 375 (430)
T ss_dssp TTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEECT-TSEE-----EE
T ss_pred cccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEECC-CCcE-----EE
Confidence 1111 11100 000000 0111223 45553 345 56666566788888883 3432 22
Q ss_pred cccccC---CCC-c--cccccccceeEEEEEccC-CCEEEEeC-CCeEEEEECC
Q 015363 325 FEEQEA---PGT-R--SFFTEIIASISDIKFARN-GRHILSRD-YMTLKLWDIN 370 (408)
Q Consensus 325 ~~~~~~---~~~-~--~~~~~h~~~i~~~~~spd-g~~l~s~~-d~~v~~wd~~ 370 (408)
+.+... ... . ......-.....++++|+ +.++++-. .+.|+.++++
T Consensus 376 ~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 376 FAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 221100 000 0 000001135789999995 54444433 3788887763
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.01 E-value=0.0013 Score=53.92 Aligned_cols=198 Identities=10% Similarity=0.004 Sum_probs=111.8
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
.-...+.|. ++.++.+.+.+|.|+++|+++++..... .... .+ .....+++..+
T Consensus 55 ~ftqGL~~~---~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~---------~F-------geGit~~g~~L------ 108 (268)
T 3nok_A 55 AFTQGLVFH---QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN---------IF-------AEGLASDGERL------ 108 (268)
T ss_dssp CCEEEEEEE---TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT---------CC-------EEEEEECSSCE------
T ss_pred cccceEEEE---CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC---------cc-------eeEEEEeCCEE------
Confidence 335678884 3567788889999999999999887766 3221 11 11123334433
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEe
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~ 271 (408)
....-.++.+.+|| ... .+.+..+... ..-..+ .+++..|+.+ .++.|.++|..+. +....+
T Consensus 109 -----y~ltw~~~~v~V~D-~~T------l~~~~ti~~~--~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~-~v~~~I 171 (268)
T 3nok_A 109 -----YQLTWTEGLLFTWS-GMP------PQRERTTRYS--GEGWGL--CYWNGKLVRSDGGTMLTFHEPDGF-ALVGAV 171 (268)
T ss_dssp -----EEEESSSCEEEEEE-TTT------TEEEEEEECS--SCCCCE--EEETTEEEEECSSSEEEEECTTTC-CEEEEE
T ss_pred -----EEEEccCCEEEEEE-CCc------CcEEEEEeCC--CceeEE--ecCCCEEEEECCCCEEEEEcCCCC-eEEEEE
Confidence 23345678888888 322 2222222111 111233 3567888887 7899999999854 444443
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccC-CCCccccccccceeEEEEEc
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA-PGTRSFFTEIIASISDIKFA 350 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~~s 350 (408)
.+... ...-..++.+.|. +| .+++..-.+..|.+.|.++++... .+..... +........-....+.|+|+
T Consensus 172 ~V~~~--g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~TG~V~~----~Idl~~L~~~~~~~~~~~~~vlNGIA~d 243 (268)
T 3nok_A 172 QVKLR--GQPVELINELECA-NG-VIYANIWHSSDVLEIDPATGTVVG----VIDASALTRAVAGQVTNPEAVLNGIAVE 243 (268)
T ss_dssp ECEET--TEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTTCBEEE----EEECHHHHHHHTTTCCCTTCCEEEEEEC
T ss_pred EeCCC--CcccccccccEEe-CC-EEEEEECCCCeEEEEeCCCCcEEE----EEECCCCcccccccccCcCCceEEEEEc
Confidence 32110 0011235677777 77 777766678899999999997652 2211100 00000000002357899999
Q ss_pred cCC-CEEEEeCC
Q 015363 351 RNG-RHILSRDY 361 (408)
Q Consensus 351 pdg-~~l~s~~d 361 (408)
|++ +++++|-.
T Consensus 244 p~~~rlfVTGK~ 255 (268)
T 3nok_A 244 PGSGRIFMTGKL 255 (268)
T ss_dssp TTTCCEEEEETT
T ss_pred CCCCEEEEeCCC
Confidence 965 56667743
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.00 E-value=0.0081 Score=58.65 Aligned_cols=261 Identities=13% Similarity=0.104 Sum_probs=141.4
Q ss_pred ccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
...|.++...++|. |-.|+.++-|..|+..++... .+.... . .....
T Consensus 362 ~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~------------------------~~~~~~-~-------~~~~~ 408 (781)
T 3v9f_A 362 NKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAI------------------------YNKENR-E-------LLSNS 408 (781)
T ss_dssp SSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEE------------------------CC-------------CCCSB
T ss_pred CcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEE------------------------EccCCC-C-------CCCcc
Confidence 35689999988887 556666666888886543210 000000 0 00145
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
|.++.. +.+|. |..|+.++-+..++..+++....... ..+...+. ++...++|..
T Consensus 409 v~~i~~--d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~------~~~~~~v~-------~i~~d~~g~l--------- 463 (781)
T 3v9f_A 409 VLCSLK--DSEGN-LWFGTYLGNISYYNTRLKKFQIIELE------KNELLDVR-------VFYEDKNKKI--------- 463 (781)
T ss_dssp EEEEEE--CTTSC-EEEEETTEEEEEECSSSCEEEECCST------TTCCCCEE-------EEEECTTSEE---------
T ss_pred eEEEEE--CCCCC-EEEEeccCCEEEEcCCCCcEEEeccC------CCCCCeEE-------EEEECCCCCE---------
Confidence 888876 45564 55577777788899887765443211 01122333 4555555554
Q ss_pred CccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecC
Q 015363 195 NDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVK 274 (408)
Q Consensus 195 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~ 274 (408)
..++. +-+..++ ............ .. .......|.++...++|.+.+...++-|..||.+. +. +..+..
T Consensus 464 ----wigt~-~Gl~~~~-~~~~~~~~~~~~-~~-~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~-~~-~~~~~~- 532 (781)
T 3v9f_A 464 ----WIGTH-AGVFVID-LASKKVIHHYDT-SN-SQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDM-QL-VRKFNQ- 532 (781)
T ss_dssp ----EEEET-TEEEEEE-SSSSSCCEEECT-TT-SSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTC-CE-EEEECT-
T ss_pred ----EEEEC-CceEEEe-CCCCeEEecccC-cc-cccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCC-Ce-EEEccC-
Confidence 33333 3455555 221111000000 00 00113568999999999888777534477788763 32 222211
Q ss_pred CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCC
Q 015363 275 PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGR 354 (408)
Q Consensus 275 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~ 354 (408)
...+ ....|.++...++| .+.+ |+.+|.|..||..+++. ..+..... +. ...|.++...++|.
T Consensus 533 ~~~l--~~~~i~~i~~d~~g-~lWi-~T~~Glv~~~d~~~~~~-----~~~~~~~g------l~--~~~i~~i~~d~~g~ 595 (781)
T 3v9f_A 533 YEGF--CSNTINQIYRSSKG-QMWL-ATGEGLVCFPSARNFDY-----QVFQRKEG------LP--NTHIRAISEDKNGN 595 (781)
T ss_dssp TTTC--SCSCEEEEEECTTS-CEEE-EETTEEEEESCTTTCCC-----EEECGGGT------CS--CCCCCEEEECSSSC
T ss_pred CCCC--CCCeeEEEEECCCC-CEEE-EECCCceEEECCCCCcE-----EEccccCC------CC--CceEEEEEECCCCC
Confidence 0111 24568999999998 6544 44567658888876643 22211110 00 13577888888998
Q ss_pred EEEEeCCCeEEEEECCCCCCceeeeeeccc
Q 015363 355 HILSRDYMTLKLWDINMDSGPVATFQVHEH 384 (408)
Q Consensus 355 ~l~s~~d~~v~~wd~~~~~~~~~~~~~~~~ 384 (408)
+.+++..| |..|+..+ ..+..+....+
T Consensus 596 lW~~t~~G-l~~~~~~~--~~~~~~~~~dG 622 (781)
T 3v9f_A 596 IWASTNTG-ISCYITSK--KCFYTYDHSNN 622 (781)
T ss_dssp EEEECSSC-EEEEETTT--TEEEEECGGGT
T ss_pred EEEEcCCc-eEEEECCC--CceEEecccCC
Confidence 77776554 77778764 44555554444
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.97 E-value=0.0017 Score=53.28 Aligned_cols=203 Identities=9% Similarity=0.087 Sum_probs=111.4
Q ss_pred eeEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCC
Q 015363 176 PKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDL 254 (408)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~ 254 (408)
.+++.|++..+ +++...++.|...| .. ++..+.+........-.|++.+++.++++. .++
T Consensus 31 Gla~~~~~~~L-----------~aV~d~~~~I~~ld-~~-------g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~ 91 (255)
T 3qqz_A 31 SLTWSAQSNTL-----------FSTINKPAAIVEMT-TN-------GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDY 91 (255)
T ss_dssp EEEEETTTTEE-----------EEEEETTEEEEEEE-TT-------CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTT
T ss_pred eeEEeCCCCEE-----------EEEECCCCeEEEEe-CC-------CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCC
Confidence 68888887765 23355566666655 21 122222111222457788999988877777 788
Q ss_pred eEEEEeCCCCCc--eeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCC
Q 015363 255 RINLWNLEISNQ--SFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPG 332 (408)
Q Consensus 255 ~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 332 (408)
.+.++++..... ....+.+. ..........-.++|+|.+ +.|.++.......||.++ +..-...+..+.....
T Consensus 92 ~l~~~~v~~~~~i~~~~~~~~~-~~~~~~N~g~EGLA~d~~~-~~L~va~E~~p~~i~~~~-g~~~~~~l~i~~~~~~-- 166 (255)
T 3qqz_A 92 AIYVISLTPNSEVKILKKIKIP-LQESPTNCGFEGLAYSRQD-HTFWFFKEKNPIEVYKVN-GLLSSNELHISKDKAL-- 166 (255)
T ss_dssp EEEEEEECTTCCEEEEEEEECC-CSSCCCSSCCEEEEEETTT-TEEEEEEESSSEEEEEEE-STTCSSCCEEEECHHH--
T ss_pred cEEEEEcCCCCeeeeeeeeccc-cccccccCCcceEEEeCCC-CEEEEEECcCCceEEEEc-ccccCCceeeecchhh--
Confidence 999999875543 12222211 0012234557899999998 555555555445555554 1100000111110000
Q ss_pred CccccccccceeEEEEEccCCC-EEEEeC-CCeEEEEECCCCCCceeeeeecccccceEEecCCCeeeeeeceeeec
Q 015363 333 TRSFFTEIIASISDIKFARNGR-HILSRD-YMTLKLWDINMDSGPVATFQVHEHLRPKVMHSSKNYFMGLDNIHTLY 407 (408)
Q Consensus 333 ~~~~~~~h~~~i~~~~~spdg~-~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 407 (408)
. -..+...+.+++++|... +++.++ ...|..+|.+ ++.+..+.-..+.-.....+-+.+=|++|.-.+||
T Consensus 167 -~--~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ly 238 (255)
T 3qqz_A 167 -Q--RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIY 238 (255)
T ss_dssp -H--HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT--CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEE
T ss_pred -c--cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC--CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEE
Confidence 0 000123568899999654 444454 4899999985 56777665544322211224466677888877777
No 261
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.97 E-value=0.0021 Score=62.36 Aligned_cols=199 Identities=8% Similarity=-0.009 Sum_probs=103.7
Q ss_pred ceEEEEEC-CCCCeEEEeec-C----CeEEEEEeCCC-CCCCCcccccccccccccCCCccceeeeeccCCccccccccc
Q 015363 37 IISAIEFD-KSGDHLATGDR-G----GRVVLFERTDT-RDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSL 109 (408)
Q Consensus 37 ~V~~~~~s-~~~~~l~sg~~-d----g~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~ 109 (408)
.+...+|| |||++||.+.. + .+|+++|+.++ +.. ...+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l----------------------~~~~~------------ 220 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI----------------------ADKVS------------ 220 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC----------------------CCCEE------------
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC----------------------Ccccc------------
Confidence 67889999 99998886543 2 25999999877 421 00000
Q ss_pred ccccceeEEEEeecCCCcEEEEEeCC-----CeEEEEEcCCCcE--EEEeccCCCCcccCCCCCeEeecCCceeeEEccC
Q 015363 110 EIEEKINKIRWCQSANSALYLLSTND-----KTIKLWKVQEKKV--KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMAN 182 (408)
Q Consensus 110 ~~~~~v~~v~~~p~~~~~~l~~~~~d-----~~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 182 (408)
.....++|+|+ |+.|+....| ..|.++++.++.. ..++..... ... ..+.|+||
T Consensus 221 ---~~~~~~~WspD--g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~-------~~~-------~~~~~SpD 281 (751)
T 2xe4_A 221 ---GTNGEIVWGPD--HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNP-------LFS-------AFMYKAAD 281 (751)
T ss_dssp ---EECSCCEECSS--TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCT-------TCE-------EEEEECTT
T ss_pred ---CceeeEEEecC--CCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCC-------ceE-------EEEEECCC
Confidence 12456889755 7777777654 3577788876542 222221110 111 15789999
Q ss_pred CCeeecccccccCccccCCCCCceeeeceeeecccccccccc-ceeeccccccceEEEEeCCCCCEEEEe-cC----CeE
Q 015363 183 GGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGC-RRIYAHAHDYHINSISNNSDGETFISA-DD----LRI 256 (408)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d----~~i 256 (408)
|+.|..... ......|.++| +..... .. .+.+.........++.|+..+.+++.+ .+ ..|
T Consensus 282 g~~l~~~~~---------~~~~~~l~~~d-~~~~~~----~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L 347 (751)
T 2xe4_A 282 TNTLCIGSQ---------SPETAEVHLLD-LRKGNA----HNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKL 347 (751)
T ss_dssp SSEEEEEEE---------CSSCEEEEEEE-SSSCTT----CCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEE
T ss_pred CCEEEEEec---------CCCCceEEEEE-CCCCCC----CceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEE
Confidence 998732111 11345566666 332110 11 012223333445556655444455555 33 356
Q ss_pred EEEeCCCCCceee-EeecCCCcccCCcC--CeEEEEEcCCCCceEEEEeCCCeEE--EEEc
Q 015363 257 NLWNLEISNQSFN-IVDVKPANMEDLTE--VITSAEFHPTHCNMLAYSSSKGSIR--LIDM 312 (408)
Q Consensus 257 ~iwd~~~~~~~~~-~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~s~~~dg~i~--iwd~ 312 (408)
..+|+........ ++ . +.. .+..+.+. +..++++...++..+ ++++
T Consensus 348 ~~~d~~~~~~~~~~li-------~-~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 348 LIAPRGQPSDWSHVLV-------D-HSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEETTSTTCCCCEEE-------C-CCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEcCCCcccceeeEE-------C-CCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 6667653222122 21 1 222 34455554 436677777787644 4554
No 262
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.96 E-value=0.0027 Score=60.57 Aligned_cols=63 Identities=6% Similarity=0.060 Sum_probs=42.4
Q ss_pred CCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec
Q 015363 304 KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 304 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
+|.|..||+.+++..- ..... .......+...+.+|+.++ |+.|+.||.++ ++.+..++..
T Consensus 437 ~g~l~A~D~~tG~~~W----~~~~~-------------~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t-G~~l~~~~~~ 498 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAW----KVPYP-------------THWNGGTLSTAGNLVFQGTAAGQMHAYSADK-GEALWQFEAQ 498 (668)
T ss_dssp EEEEEEEETTTTEEEE----EEEES-------------SSCCCCEEEETTTEEEEECTTSEEEEEETTT-CCEEEEEECS
T ss_pred cceEEEEeCCCCcEEE----EccCC-------------CCCcCceeEeCCCEEEEECCcccchhhhhhc-ChhheEecCC
Confidence 3789999999987542 22211 1122233445677788775 69999999998 7888888765
Q ss_pred cc
Q 015363 383 EH 384 (408)
Q Consensus 383 ~~ 384 (408)
..
T Consensus 499 ~~ 500 (668)
T 1kv9_A 499 SG 500 (668)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.95 E-value=0.008 Score=52.29 Aligned_cols=184 Identities=9% Similarity=0.054 Sum_probs=105.9
Q ss_pred EEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCcee
Q 015363 128 LYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSL 207 (408)
Q Consensus 128 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 207 (408)
+|+.+. ...|+..++............. .+..++|.+....+ +++-...+.|
T Consensus 46 ~ll~~~-~~~I~~i~~~g~~~~~~~~~~~----------------~~~~l~~d~~~~~l-----------y~~D~~~~~I 97 (349)
T 3v64_C 46 VLLFAN-RIDIRQVLPHRSEYTLLLNNLE----------------NAIALDFHHRRELV-----------FWSDVTLDRI 97 (349)
T ss_dssp EEEEEC-BSCEEEECTTSCCEEEEECSCS----------------CEEEEEEETTTTEE-----------EEEETTTTEE
T ss_pred eeEeec-ccceEEEeCCCCeeEEeecCCC----------------ceEEEEEeccccEE-----------EEEeccCCce
Confidence 444433 3457777887665544433211 11267888766655 2444455667
Q ss_pred eeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCe
Q 015363 208 RLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVI 285 (408)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 285 (408)
..++ ..... ...+..........+++++.+..|..+ ..+.|.+.+++ +.....+ +.......
T Consensus 98 ~r~~-~~g~~-------~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~l-------~~~~l~~P 161 (349)
T 3v64_C 98 LRAN-LNGSN-------VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKVL-------LWQSLEKP 161 (349)
T ss_dssp EEEE-TTSCS-------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEE-------ECTTCSCE
T ss_pred EEEe-cCCCC-------ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC-CCceEEE-------EeCCCCCc
Confidence 6665 32211 111111122345678898866555544 67899999988 3322222 12223456
Q ss_pred EEEEEcCCCCceEEEEeCC-CeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC--CC
Q 015363 286 TSAEFHPTHCNMLAYSSSK-GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD--YM 362 (408)
Q Consensus 286 ~~~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--d~ 362 (408)
..++++|.+..++.+-... +.|..+++..... ..+.... ......++|+|++..|+.++ .+
T Consensus 162 ~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-----~~~~~~~-----------~~~PnGla~d~~~~~lY~aD~~~~ 225 (349)
T 3v64_C 162 RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-----RIIADTH-----------LFWPNGLTIDYAGRRMYWVDAKHH 225 (349)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----EESCCSS-----------CSCEEEEEEETTTTEEEEEETTTT
T ss_pred ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-----EEEEECC-----------CCCcceEEEeCCCCEEEEEECCCC
Confidence 8999999663555555555 7899988875432 1111111 13578999999887777763 38
Q ss_pred eEEEEECCC
Q 015363 363 TLKLWDINM 371 (408)
Q Consensus 363 ~v~~wd~~~ 371 (408)
.|..+|++.
T Consensus 226 ~I~~~~~dG 234 (349)
T 3v64_C 226 VIERANLDG 234 (349)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 999999863
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.94 E-value=0.0075 Score=51.66 Aligned_cols=187 Identities=5% Similarity=-0.039 Sum_probs=105.5
Q ss_pred EEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCceee
Q 015363 129 YLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSLR 208 (408)
Q Consensus 129 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 208 (408)
|+.+.. ..|+..|+.+.+...+..... .+..+.|.+.+..+ +++-...+.|.
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~~~~~~----------------~p~g~~~d~~~~~l-----------y~~D~~~~~I~ 55 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSLIPNLR----------------NVVALDTEVASNRI-----------YWSDLSQRMIC 55 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEECSCS----------------SEEEEEEETTTTEE-----------EEEETTTTEEE
T ss_pred EEEECC-CeEEEEECCCcceEehhcCCC----------------ceEEEEEEeCCCEE-----------EEEECCCCcEE
Confidence 444333 468888988776554433211 12267888766555 24445567777
Q ss_pred eceeeeccccccccccceeeccccccceEEEEeCCCCCEEE-Ee-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeE
Q 015363 209 LPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFI-SA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVIT 286 (408)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 286 (408)
.++ +.... .......+..........+++++.+..|. +- ..+.|.+++.. +.....++ ........
T Consensus 56 ~~~-~~g~~---~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~-------~~~~~~P~ 123 (316)
T 1ijq_A 56 STQ-LDRAH---GVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF-------RENGSKPR 123 (316)
T ss_dssp EEE-C-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEE-------ECTTCCEE
T ss_pred EEE-CCCCC---CCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC-CCceEEEE-------ECCCCCcc
Confidence 766 33210 00011111122223457888987555554 44 68899999987 33332221 11234568
Q ss_pred EEEEcCCCCceEEEEeCC-CeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-C-Ce
Q 015363 287 SAEFHPTHCNMLAYSSSK-GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-Y-MT 363 (408)
Q Consensus 287 ~~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d-~~ 363 (408)
.++++|.+..++.+.... +.|...++..... ..+.... ......++++|++..|+.++ . +.
T Consensus 124 ~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-----~~~~~~~-----------~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 124 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-----YSLVTEN-----------IQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCCE-----EEEECSS-----------CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred eEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-----EEEEECC-----------CCCceEEEEeccCCEEEEEECCCCe
Confidence 999999662555554333 7888888764322 1121111 13578999999888777763 3 89
Q ss_pred EEEEECCC
Q 015363 364 LKLWDINM 371 (408)
Q Consensus 364 v~~wd~~~ 371 (408)
|..+|++.
T Consensus 188 I~~~d~dg 195 (316)
T 1ijq_A 188 ISSIDVNG 195 (316)
T ss_dssp EEEEETTS
T ss_pred EEEEecCC
Confidence 99999963
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.88 E-value=0.0029 Score=60.37 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=48.5
Q ss_pred EEEECC-CCCeEEEeecCC-----------eEEEEEeCCCCCCCCcccccccccccccCCCccceeeeecc-CCcccccc
Q 015363 40 AIEFDK-SGDHLATGDRGG-----------RVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQS-HEPEFDYL 106 (408)
Q Consensus 40 ~~~~s~-~~~~l~sg~~dg-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-h~~~~~~~ 106 (408)
++++.+ ++++++.|+.+. .+.+||..+++.. .+..+.. +.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~---------------------~~~~~~~~~~------ 242 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS---------------------DRTVTVTKHD------ 242 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBC---------------------CCEEEECSCC------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEE---------------------eCcccCCCCC------
Confidence 456666 888888887543 5778888776532 1111111 11
Q ss_pred cccccccceeEEEEeecCCCcEEEEEe-CCCeEEEEEcCCCcEEEEe
Q 015363 107 KSLEIEEKINKIRWCQSANSALYLLST-NDKTIKLWKVQEKKVKKVF 152 (408)
Q Consensus 107 ~~~~~~~~v~~v~~~p~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~ 152 (408)
....++++. .++.++++|+ .+..+.+||..+++.....
T Consensus 243 ------~~~~~~~~~--~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~ 281 (656)
T 1k3i_A 243 ------MFCPGISMD--GNGQIVVTGGNDAKKTSLYDSSSDSWIPGP 281 (656)
T ss_dssp ------CSSCEEEEC--TTSCEEEECSSSTTCEEEEEGGGTEEEECC
T ss_pred ------CccccccCC--CCCCEEEeCCCCCCceEEecCcCCceeECC
Confidence 112335553 4588888888 4568999999988776653
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.84 E-value=0.0056 Score=55.00 Aligned_cols=219 Identities=10% Similarity=0.044 Sum_probs=113.3
Q ss_pred ceeEEEEeec-CCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 114 KINKIRWCQS-ANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 114 ~v~~v~~~p~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
....|+|.|+ .++ .|..+...+.|+.++..+++......... .+..+++.++|...
T Consensus 140 ~P~gvavd~~s~~g-~Lyv~D~~~~I~~id~~~g~v~~~~~~~~----------------~P~giavd~dG~ly------ 196 (433)
T 4hw6_A 140 NIWRMMFDPNSNYD-DLYWVGQRDAFRHVDFVNQYVDIKTTNIG----------------QCADVNFTLNGDMV------ 196 (433)
T ss_dssp CCCEEEECTTTTTC-EEEEECBTSCEEEEETTTTEEEEECCCCS----------------CEEEEEECTTCCEE------
T ss_pred CCceEEEccccCCC-EEEEEeCCCCEEEEECCCCEEEEeecCCC----------------CccEEEECCCCCEE------
Confidence 3668899652 234 45555444899999998887665443111 12268889998833
Q ss_pred ccCccccCCCCC----ceeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEEEEeCCCCCc
Q 015363 193 ASNDSSFPPGGV----SSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRINLWNLEISNQ 266 (408)
Q Consensus 193 ~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~iwd~~~~~~ 266 (408)
++.... ..+...+ ........ ..+ ........++++| ++.++++- .++.|+.+|..+...
T Consensus 197 ------Vad~~~~~~~~gv~~~~---~~~~~~~~---~~~--~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 197 ------VVDDQSSDTNTGIYLFT---RASGFTER---LSL--CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp ------EEECCSCTTSEEEEEEC---GGGTTCCE---EEE--EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ------EEcCCCCcccceEEEEE---CCCCeecc---ccc--cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 221111 1121111 10000000 011 1123456788999 67766666 788999999873332
Q ss_pred eeeEeecCCCcccCCcCCeEEEEEcCCCCc-eEEEEeCCCeEEEEEcCC--Cceecccccccccc-cCCCCcc--ccccc
Q 015363 267 SFNIVDVKPANMEDLTEVITSAEFHPTHCN-MLAYSSSKGSIRLIDMRQ--SALCDTHSKLFEEQ-EAPGTRS--FFTEI 340 (408)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~-~~~~~~~--~~~~h 340 (408)
...+... . .......++|+|++ + ++++-...+.|+.+++.. +... ....+.+. ....... .....
T Consensus 263 ~~~~~~~-----~-~~~~~~~ia~dpdG-~~LYvad~~~~~I~~~~~d~~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~ 333 (433)
T 4hw6_A 263 TEEEVMM-----D-TKGSNFHIVWHPTG-DWAYIIYNGKHCIYRVDYNRETGKLA--VPYIVCGQHSSPGWVDGMGTGAR 333 (433)
T ss_dssp EEEEEEC-----S-CCSSCEEEEECTTS-SEEEEEETTTTEEEEEEBCTTTCCBC--CCEEEEECTTCCCCBCEEGGGSB
T ss_pred EEEEecc-----C-CCCCcccEEEeCCC-CEEEEEeCCCCEEEEEeCCCCCcccC--cEEEEEecCCCCccCCCcccceE
Confidence 1222211 1 12223579999999 6 555556678999988753 2110 00112111 0000000 00001
Q ss_pred cceeEEEEE---------ccCCCEEEEeC-CCeEEEEECCCCCCceeeeee
Q 015363 341 IASISDIKF---------ARNGRHILSRD-YMTLKLWDINMDSGPVATFQV 381 (408)
Q Consensus 341 ~~~i~~~~~---------spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~ 381 (408)
......+++ .++|.+.++-. .+.|+.++. .+ .+.++-+
T Consensus 334 ~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~--~G-~v~t~~G 381 (433)
T 4hw6_A 334 LWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP--EG-RVTTYAG 381 (433)
T ss_dssp CSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT--TS-EEEEEEC
T ss_pred EcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC--CC-CEEEEEe
Confidence 134677899 66776666654 488999885 24 3444443
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=0.0085 Score=53.80 Aligned_cols=157 Identities=10% Similarity=0.108 Sum_probs=89.9
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
....|++.|. ++..|.++...+.|+.+|+.++......... ..+..+++.++|+.+
T Consensus 138 ~P~~lavdp~-~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~----------------~~P~~ia~d~~G~~l------- 193 (430)
T 3tc9_A 138 GAVWLSFDPK-NHNHLYLVGEQHPTRLIDFEKEYVSTVYSGL----------------SKVRTICWTHEADSM------- 193 (430)
T ss_dssp CCCEEEEETT-EEEEEEEEEBTEEEEEEETTTTEEEEEECCC----------------SCEEEEEECTTSSEE-------
T ss_pred CCCEEEECCC-CCCeEEEEeCCCcEEEEECCCCEEEEEecCC----------------CCcceEEEeCCCCEE-------
Confidence 4578888641 1235555555588999999887765544321 112268899999855
Q ss_pred cCccccCCCCCc----eeeeceeeeccccccccccceeeccccccceEEEEeCC-CCCEEEEe-cCCeEEEEeCCCCCce
Q 015363 194 SNDSSFPPGGVS----SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNS-DGETFISA-DDLRINLWNLEISNQS 267 (408)
Q Consensus 194 ~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~-~d~~i~iwd~~~~~~~ 267 (408)
+++....+ .+...+ ..... ... ..+ . .......++++| ++.++++- .++.|..++... ...
T Consensus 194 ----yvad~~~~~~~~~v~~~~--~~g~~-~~~---~~l-~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~-~~~ 260 (430)
T 3tc9_A 194 ----IITNDQNNNDRPNNYILT--RESGF-KVI---TEL-T-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTT-QET 260 (430)
T ss_dssp ----EEEECCSCTTSEEEEEEE--GGGTS-CSE---EEE-E-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTT-TEE
T ss_pred ----EEEeCCCCcccceEEEEe--CCCce-eee---eee-c-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC-CcE
Confidence 12222111 122222 11110 000 111 1 123456788999 67766666 788999999883 332
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCc-eEEEEeCCCeEEEEEcCC
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCN-MLAYSSSKGSIRLIDMRQ 314 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg~i~iwd~~~ 314 (408)
..+.. ... ......++|+|++ + ++++-...+.|..++...
T Consensus 261 ~~~~~-----~~~-~~~P~gia~~pdG-~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 261 TPLFT-----IQD-SGWEFHIQFHPSG-NYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEE-----CSS-SSCCEEEEECTTS-SEEEEEETTTTEEEEEEEET
T ss_pred EEEEE-----cCC-CCcceeEEEcCCC-CEEEEEECCCCEEEEEeCCc
Confidence 22211 111 2346789999999 6 556656678999988764
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.78 E-value=0.019 Score=51.54 Aligned_cols=128 Identities=5% Similarity=-0.008 Sum_probs=69.0
Q ss_pred eEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCce----eeEeec-CCCcc------cCCcCCeEEEEE---------cCC
Q 015363 236 INSISNNSDGETFISA--DDLRINLWNLEISNQS----FNIVDV-KPANM------EDLTEVITSAEF---------HPT 293 (408)
Q Consensus 236 v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~----~~~~~~-~~~~~------~~~~~~v~~~~~---------~p~ 293 (408)
-..++|+|+++.|..+ ..+.|..++....... ..+... ....+ ...-.....+++ .++
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~ 354 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE 354 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC
Confidence 3469999999966555 6789999887632111 111110 00000 001234577999 777
Q ss_pred CCceEEEEeCCCeEEEEEcCCCceecccccccccccC---CCCc---cccccccceeEEEEEc-cCCCEEEEeC-CCeEE
Q 015363 294 HCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEA---PGTR---SFFTEIIASISDIKFA-RNGRHILSRD-YMTLK 365 (408)
Q Consensus 294 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~h~~~i~~~~~s-pdg~~l~s~~-d~~v~ 365 (408)
+ .++++-...+.|+.++. .+.. .++.+... .... ............|+++ ++|.++++-. .+.|+
T Consensus 355 g-~lyvaD~~n~~I~~~~~-~G~v-----~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 355 Y-DFYFCDRDSHTVRVLTP-EGRV-----TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp E-EEEEEETTTTEEEEECT-TSEE-----EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred C-cEEEEECCCCEEEEECC-CCCE-----EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 7 77777667789999985 4432 22222110 0000 0000012347889999 5665555543 47888
Q ss_pred EEECC
Q 015363 366 LWDIN 370 (408)
Q Consensus 366 ~wd~~ 370 (408)
.++++
T Consensus 428 ~i~~e 432 (433)
T 4hw6_A 428 KIAPE 432 (433)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 87763
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.78 E-value=0.0045 Score=53.19 Aligned_cols=157 Identities=8% Similarity=0.043 Sum_probs=88.0
Q ss_pred eeEEEEeecC-CCcEEEEEeC-----------------CCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCcee
Q 015363 115 INKIRWCQSA-NSALYLLSTN-----------------DKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIP 176 (408)
Q Consensus 115 v~~v~~~p~~-~~~~l~~~~~-----------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (408)
.+.+++. + +|.++++-.. ++.|..+|..+++........ ..+..
T Consensus 128 p~~i~~d--~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~----------------~~p~g 189 (322)
T 2fp8_A 128 LYAVTVD--QRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL----------------HVPGG 189 (322)
T ss_dssp EEEEEEC--TTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE----------------SCCCE
T ss_pred cceEEEe--cCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC----------------ccCcc
Confidence 6778884 5 5766655422 367888888777654332211 11225
Q ss_pred eEEccCCCeeecccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-c---
Q 015363 177 KSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-D--- 252 (408)
Q Consensus 177 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~--- 252 (408)
++++++|+.+ +++-...+.|..|+ +..... .. ...+.. ... ...++++++|+++++. .
T Consensus 190 ia~~~dg~~l-----------yv~d~~~~~I~~~~-~~~~~~---~~-~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 190 AEVSADSSFV-----------LVAEFLSHQIVKYW-LEGPKK---GT-AEVLVK-IPN-PGNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp EEECTTSSEE-----------EEEEGGGTEEEEEE-SSSTTT---TC-EEEEEE-CSS-EEEEEECTTSCEEEEEEEETT
T ss_pred eEECCCCCEE-----------EEEeCCCCeEEEEE-CCCCcC---Cc-cceEEe-CCC-CCCeEECCCCCEEEEecCccc
Confidence 8899998865 13334557787777 432110 11 111111 112 6788999999977776 4
Q ss_pred -------CCeEEEEeCCCCCceeeEeecCCCcccCC-cCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCC
Q 015363 253 -------DLRINLWNLEISNQSFNIVDVKPANMEDL-TEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQS 315 (408)
Q Consensus 253 -------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 315 (408)
.+.|..+|.. ++....+... .+. ...++.+.+ .++ +++++...++.|..+++...
T Consensus 252 ~~~~~~~~~~v~~~d~~--G~~~~~~~~~----~g~~~~~~~~~~~-~~g-~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDEF--GNILEVIPLP----PPFAGEHFEQIQE-HDG-LLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp SSTTSCEEEEEEEECTT--SCEEEEEECC----TTTTTSCCCEEEE-ETT-EEEEECSSCSEEEEEEC---
T ss_pred ccccCCCccEEEEECCC--CCEEEEEECC----CCCccccceEEEE-eCC-EEEEeecCCCceEEEecccc
Confidence 3667788765 3444433221 111 233556666 356 67776667888999987643
No 270
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.77 E-value=0.0049 Score=58.81 Aligned_cols=79 Identities=11% Similarity=0.186 Sum_probs=49.7
Q ss_pred ceEEEEECCCCCeEEEeec-CCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccce
Q 015363 37 IISAIEFDKSGDHLATGDR-GGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI 115 (408)
Q Consensus 37 ~V~~~~~s~~~~~l~sg~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v 115 (408)
...++++..++++++.|+. +..+.+||..+.... .+..+.... . -
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~---------------------~~~~~~~~R------------~-~ 289 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWI---------------------PGPDMQVAR------------G-Y 289 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEE---------------------ECCCCSSCC------------S-S
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCcee---------------------ECCCCCccc------------c-c
Confidence 3445778889999999984 458999998766431 011111100 1 1
Q ss_pred eEEEEeecCCCcEEEEEe-CC-----CeEEEEEcCCCcEEEE
Q 015363 116 NKIRWCQSANSALYLLST-ND-----KTIKLWKVQEKKVKKV 151 (408)
Q Consensus 116 ~~v~~~p~~~~~~l~~~~-~d-----~~i~vwd~~~~~~~~~ 151 (408)
.+++.. ++|++++.|+ .+ ..+.+||..+++....
T Consensus 290 ~s~~~~--~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 290 QSSATM--SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CEEEEC--TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred cceEEe--cCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 223332 3588888888 44 5799999998876654
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.72 E-value=0.0085 Score=55.98 Aligned_cols=63 Identities=16% Similarity=0.027 Sum_probs=39.1
Q ss_pred CCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec
Q 015363 304 KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 304 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
++.|..||+.+++..- .+... ..+....+...+..++.++ |+.|+.||.++ ++.+..++..
T Consensus 443 ~g~l~a~D~~tG~~~W----~~~~~-------------~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t-G~~lw~~~~~ 504 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKW----TKWEK-------------FAAWGGTLYTKGGLVWYATLDGYLKALDNKD-GKELWNFKMP 504 (571)
T ss_dssp CEEEEEECTTTCCEEE----EEEES-------------SCCCSBCEEETTTEEEEECTTSEEEEEETTT-CCEEEEEECS
T ss_pred CCeEEEEECCCCCEEE----EecCC-------------CCccceeEEECCCEEEEEcCCCeEEEEECCC-CCEEEEEeCC
Confidence 4788999998886542 22111 1111112223455566664 79999999998 7888888765
Q ss_pred cc
Q 015363 383 EH 384 (408)
Q Consensus 383 ~~ 384 (408)
..
T Consensus 505 ~~ 506 (571)
T 2ad6_A 505 SG 506 (571)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.72 E-value=0.016 Score=49.26 Aligned_cols=205 Identities=12% Similarity=0.079 Sum_probs=105.7
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
....++|.| +|.++++-..++.|..||..... ........ .+..+++.++|+.+
T Consensus 33 ~pegia~~~--~g~lyv~d~~~~~I~~~d~~g~~-~~~~~~~~----------------~p~gia~~~dG~l~------- 86 (306)
T 2p4o_A 33 FLENLASAP--DGTIFVTNHEVGEIVSITPDGNQ-QIHATVEG----------------KVSGLAFTSNGDLV------- 86 (306)
T ss_dssp CEEEEEECT--TSCEEEEETTTTEEEEECTTCCE-EEEEECSS----------------EEEEEEECTTSCEE-------
T ss_pred CcceEEECC--CCCEEEEeCCCCeEEEECCCCce-EEEEeCCC----------------CceeEEEcCCCcEE-------
Confidence 367889954 57766666688999999887643 33222211 12267888888754
Q ss_pred cCccccCCCCC-c-eeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeE
Q 015363 194 SNDSSFPPGGV-S-SLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNI 270 (408)
Q Consensus 194 ~~~~~~~~~~~-~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~ 270 (408)
++.... + .|..++ ...... ..............++..+++..+++- .++.|.++|..........
T Consensus 87 -----vad~~~~~~~v~~~d-~~~g~~------~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~ 154 (306)
T 2p4o_A 87 -----ATGWNADSIPVVSLV-KSDGTV------ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWL 154 (306)
T ss_dssp -----EEEECTTSCEEEEEE-CTTSCE------EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred -----EEeccCCcceEEEEc-CCCCeE------EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEE
Confidence 322211 1 233333 111110 000000111223445555555555555 5888999887632111111
Q ss_pred ee--cCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCC-CceecccccccccccCCCCccccccccceeEEE
Q 015363 271 VD--VKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQ-SALCDTHSKLFEEQEAPGTRSFFTEIIASISDI 347 (408)
Q Consensus 271 ~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 347 (408)
.. +..............+ +|++..++++-...++|..+++.. +... ....+... .....+
T Consensus 155 ~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~--~~~~~~~~-------------~~P~gi 217 (306)
T 2p4o_A 155 EHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG--EPEIFVEQ-------------TNIDDF 217 (306)
T ss_dssp ECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC--CCEEEEES-------------CCCSSE
T ss_pred ECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC--ccEEEecc-------------CCCCCe
Confidence 00 0000011111234555 788734555556678999999875 3211 00111100 234668
Q ss_pred EEccCCCEEEEeC-CCeEEEEECCCCCCc
Q 015363 348 KFARNGRHILSRD-YMTLKLWDINMDSGP 375 (408)
Q Consensus 348 ~~spdg~~l~s~~-d~~v~~wd~~~~~~~ 375 (408)
+++++|++.++.. .+.|.++|.. ++.
T Consensus 218 ~vd~dG~l~va~~~~~~V~~~~~~--G~~ 244 (306)
T 2p4o_A 218 AFDVEGNLYGATHIYNSVVRIAPD--RST 244 (306)
T ss_dssp EEBTTCCEEEECBTTCCEEEECTT--CCE
T ss_pred EECCCCCEEEEeCCCCeEEEECCC--CCE
Confidence 9999998766664 4899999874 454
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.72 E-value=0.018 Score=49.36 Aligned_cols=206 Identities=6% Similarity=0.016 Sum_probs=112.4
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcE-EEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKV-KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGC 192 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~ 192 (408)
.+..+.|.+. ++.++.+-...+.|..+++..+.. ..+..... ..+..+++.+.+..+
T Consensus 36 ~~~~ld~d~~-~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l---------------~~p~glavd~~~g~l------ 93 (318)
T 3sov_A 36 DAAAVDFVFS-HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL---------------LSPDGLACDWLGEKL------ 93 (318)
T ss_dssp EEEEEEEEGG-GTEEEEEETTTTEEEEEETTSSSCCCEEEEECC---------------SCCCEEEEETTTTEE------
T ss_pred ccEEEEEEeC-CCEEEEEECCCCcEEEEEccCCCceEEEEcCCC---------------CCccEEEEEcCCCeE------
Confidence 3678899753 234444545778888888876532 11111100 111246666544443
Q ss_pred ccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe---cCCeEEEEeCCCCCceee
Q 015363 193 ASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA---DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 193 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~---~d~~i~iwd~~~~~~~~~ 269 (408)
+++-...+.|.+++ +.. .....+..........++++|.+..|..+ ..+.|...+++ +.....
T Consensus 94 -----y~~d~~~~~I~~~~-~dG-------~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~ 159 (318)
T 3sov_A 94 -----YWTDSETNRIEVSN-LDG-------SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFI 159 (318)
T ss_dssp -----EEEETTTTEEEEEE-TTS-------CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEE
T ss_pred -----EEEECCCCEEEEEE-CCC-------CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEE
Confidence 24444556677665 222 11111112333557899999876666555 25788888887 332222
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEE
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKF 349 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 349 (408)
++ ...-.....++++|++..++.+=+..+.|..+|+..... +.+.... ......+++
T Consensus 160 ~~-------~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-----~~~~~~~-----------~~~P~glav 216 (318)
T 3sov_A 160 II-------NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-----QAVVKGS-----------LPHPFALTL 216 (318)
T ss_dssp EE-------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEECSC-----------CSCEEEEEE
T ss_pred EE-------ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-----EEEecCC-----------CCCceEEEE
Confidence 21 122344689999997735555555678999999875332 1111100 133566777
Q ss_pred ccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 350 ARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 350 spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
.. +.++.+-. .+.|..++..+ ++..+.+.
T Consensus 217 ~~-~~lywtd~~~~~V~~~~~~~-G~~~~~i~ 246 (318)
T 3sov_A 217 FE-DILYWTDWSTHSILACNKYT-GEGLREIH 246 (318)
T ss_dssp ET-TEEEEEETTTTEEEEEETTT-CCSCEEEE
T ss_pred eC-CEEEEEecCCCeEEEEECCC-CCceEEEe
Confidence 53 33344443 48999999876 45544443
No 274
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.71 E-value=0.03 Score=53.42 Aligned_cols=74 Identities=14% Similarity=0.162 Sum_probs=48.8
Q ss_pred EEEeCCCCCEEEEe-cCC-------------------eEEEEeCCCCCceeeEeecCCCcccCCc-------CCeEEEEE
Q 015363 238 SISNNSDGETFISA-DDL-------------------RINLWNLEISNQSFNIVDVKPANMEDLT-------EVITSAEF 290 (408)
Q Consensus 238 ~i~~~~~~~~l~~~-~d~-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~ 290 (408)
.++++|+...++.+ .++ .|..+|.++++..... + ...|. .++....+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~-~-----~~~~~~wd~~~~~~~~~~d~ 307 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHY-Q-----VTPGDSWDFTATQQITLAEL 307 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE-E-----SSTTCCSCCCCCSCEEEEEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEe-e-----cCCCccccccCCCCcEEEEe
Confidence 46788888887776 554 4899999866655443 2 11121 22222233
Q ss_pred cCCCCc---eEEEEeCCCeEEEEEcCCCcee
Q 015363 291 HPTHCN---MLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 291 ~p~~~~---~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
..+| . .++.++.+|.++++|..+++.+
T Consensus 308 ~~~G-~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 308 NIDG-KPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EETT-EEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ccCC-cEEEEEEEECCCCEEEEEECCCCCEe
Confidence 3456 4 6888999999999999999765
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.61 E-value=0.026 Score=48.29 Aligned_cols=209 Identities=9% Similarity=0.007 Sum_probs=111.8
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCC----CcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQE----KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..+..++|.+. ++.++.+-...+.|..+++.+ ........... ..+..+++.+.+..+
T Consensus 30 ~~p~g~~~d~~-~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~---------------~~p~glavd~~~~~l-- 91 (316)
T 1ijq_A 30 RNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI---------------QAPDGLAVDWIHSNI-- 91 (316)
T ss_dssp SSEEEEEEETT-TTEEEEEETTTTEEEEEEC--------CEEEECSSC---------------SCCCEEEEETTTTEE--
T ss_pred CceEEEEEEeC-CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC---------------CCcCEEEEeecCCeE--
Confidence 34778999643 234445555678999999876 22222221110 111256666544443
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cC-CeEEEEeCCCCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DD-LRINLWNLEISN 265 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d-~~i~iwd~~~~~ 265 (408)
+++-...+.|.+.+ ... ...+.+..........++++|.+..|..+ .. +.|..++++ +.
T Consensus 92 ---------y~~d~~~~~I~~~~-~~g-------~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~ 153 (316)
T 1ijq_A 92 ---------YWTDSVLGTVSVAD-TKG-------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GV 153 (316)
T ss_dssp ---------EEEETTTTEEEEEE-TTS-------SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SC
T ss_pred ---------EEEECCCCEEEEEe-CCC-------CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CC
Confidence 13434556777665 221 11111212223467899999976655554 33 788888887 33
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
....+. ...-.....++++|++..++++-+..+.|..+|+..... +.+.... +......
T Consensus 154 ~~~~~~-------~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-----~~~~~~~---------~~~~~P~ 212 (316)
T 1ijq_A 154 DIYSLV-------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-----KTILEDE---------KRLAHPF 212 (316)
T ss_dssp CEEEEE-------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEEECT---------TTTSSEE
T ss_pred CeEEEE-------ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-----EEEeecC---------CccCCcE
Confidence 222221 112345689999998735555555678999999875322 2221110 0012346
Q ss_pred EEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 346 DIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 346 ~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
.+++. .+.++++-. .+.|..++..+ ++.+..+.
T Consensus 213 giav~-~~~ly~~d~~~~~V~~~~~~~-g~~~~~i~ 246 (316)
T 1ijq_A 213 SLAVF-EDKVFWTDIINEAIFSANRLT-GSDVNLLA 246 (316)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEETTT-CCCCEEEE
T ss_pred EEEEE-CCEEEEEECCCCeEEEEeCCC-CcceEEEe
Confidence 67774 344444443 48999998765 45555543
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.59 E-value=0.00096 Score=64.72 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=71.8
Q ss_pred ceEEEEeC-CCCCEEEEe-c-C----CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC---
Q 015363 235 HINSISNN-SDGETFISA-D-D----LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK--- 304 (408)
Q Consensus 235 ~v~~i~~~-~~~~~l~~~-~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--- 304 (408)
.+...+|+ |||++||.+ + + ..|+++|+.++...+. ..+. .....++|+||+ +.|+....|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~------~~~~---~~~~~~~WspDg-~~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA------DKVS---GTNGEIVWGPDH-TSLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC------CCEE---EECSCCEECSST-TEEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC------cccc---CceeeEEEecCC-CEEEEEEECCCC
Confidence 57788999 999998865 2 2 2599999985512110 0011 113468999999 666666654
Q ss_pred --CeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe--C--CCeEEEEECCC
Q 015363 305 --GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR--D--YMTLKLWDINM 371 (408)
Q Consensus 305 --g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~--~--d~~v~~wd~~~ 371 (408)
..|+++++.++..... ..+.... ......+.|||||++|+.. + ...|.++|+.+
T Consensus 245 ~~~~v~~~~lgt~~~~~~--lv~~~~~-----------~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDV--CLYEEHN-----------PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CEEEEEEEETTSCGGGCE--EEEECCC-----------TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred CCCEEEEEECCCCchhcE--EEEecCC-----------CceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 3688888876532110 1121111 1235678999999988854 2 26788899976
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.59 E-value=0.035 Score=49.24 Aligned_cols=209 Identities=8% Similarity=0.003 Sum_probs=110.4
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc----EEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK----VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..+..|+|.+. ++.++.+-...+.|+.+++.... ...+..... ..+..+++.+.+..|
T Consensus 112 ~~~~~l~~d~~-~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~---------------~~p~glavD~~~~~l-- 173 (400)
T 3p5b_L 112 RNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI---------------QAPDGLAVDWIHSNI-- 173 (400)
T ss_dssp SCEEEEEEETT-TTEEEEEETTTTEEEEEEC------CCCEEEECSSC---------------SCEEEEEEETTTTEE--
T ss_pred CcceEEeeeec-cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC---------------CCcccEEEEecCCce--
Confidence 44788999653 23344444567888888886522 222221111 112246666644443
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--c-CCeEEEEeCCCCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--D-DLRINLWNLEISN 265 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~-d~~i~iwd~~~~~ 265 (408)
+++-...+.|.+.+ +.. .....+........+.|+++|.+..|..+ . .+.|...+++ +.
T Consensus 174 ---------Y~~d~~~~~I~~~~-~~g-------~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d-G~ 235 (400)
T 3p5b_L 174 ---------YWTDSVLGTVSVAD-TKG-------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GV 235 (400)
T ss_dssp ---------EEEETTTTEEEEEC-TTT-------CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT-SC
T ss_pred ---------EEEECCCCeEEEEe-CCC-------CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC-CC
Confidence 24444556666655 221 11122222233457899999976666655 2 4788888887 33
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
....+ ....-.....|+++|++..++++=...+.|..+|+..... ..+.... +......
T Consensus 236 ~~~~~-------~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-----~~~~~~~---------~~l~~P~ 294 (400)
T 3p5b_L 236 DIYSL-------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-----KTILEDE---------KRLAHPF 294 (400)
T ss_dssp SCEEE-------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-----EEEEECS---------STTSSEE
T ss_pred ccEEE-------EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-----EEEEeCC---------CCCCCCE
Confidence 32222 1222345789999988734445545578999999875432 1221110 0012345
Q ss_pred EEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 346 DIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 346 ~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
.+++. .+.++++-. .+.|..+|..+ ++.+..+.
T Consensus 295 gl~v~-~~~lywtd~~~~~V~~~~~~~-G~~~~~i~ 328 (400)
T 3p5b_L 295 SLAVF-EDKVFWTDIINEAIFSANRLT-GSDVNLLA 328 (400)
T ss_dssp EEEEE-TTEEEEEESSSCSEEEEESSS-CCCCEEEE
T ss_pred EEEEe-CCEEEEecCCCCeEEEEEcCC-CCceEEEe
Confidence 66663 333444444 48898888665 55555544
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.58 E-value=0.05 Score=52.73 Aligned_cols=114 Identities=8% Similarity=-0.015 Sum_probs=74.2
Q ss_pred cceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC-CeEEEE
Q 015363 234 YHINSISNNSDGETFISA--DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK-GSIRLI 310 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-g~i~iw 310 (408)
.....|++++.++.|..+ ..+.|.+.++. +.....++ .........|+++|.+..++.+-... +.|...
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~~~~~l~-------~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~ 542 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF-------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 542 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEE-------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCC-CCeEEEEE-------eCCCCCcceEEEecCCCCEEEecCCCCCeEEEE
Confidence 456688999887666655 68899999998 43333221 22234478999999862444443333 789888
Q ss_pred EcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC--CCeEEEEECCC
Q 015363 311 DMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD--YMTLKLWDINM 371 (408)
Q Consensus 311 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--d~~v~~wd~~~ 371 (408)
++..... ..+.... ......|++++.+..|+.++ .+.|...+++.
T Consensus 543 ~~dG~~~-----~~lv~~~-----------l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 543 GLNGVDI-----YSLVTEN-----------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp ETTSCCE-----EEEECSS-----------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ecCCCce-----EEEEeCC-----------CCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 8875432 1221111 14578999998877777763 37899999863
No 279
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.55 E-value=0.033 Score=47.86 Aligned_cols=117 Identities=7% Similarity=0.092 Sum_probs=68.5
Q ss_pred ccceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEc
Q 015363 233 DYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDM 312 (408)
Q Consensus 233 ~~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 312 (408)
...+..+++.+++.+++.+.+|.+++.+.+ .+.....+.. ..+ .....+..+.+.+++ .+++++ .++.| ++..
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D-~G~tW~~~~~--~~~-~~~~~~~~v~~~~~~-~~~~~g-~~g~i-~~S~ 276 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNGGKIAFSDPD-NSENWGELLS--PLR-RNSVGFLDLAYRTPN-EVWLAG-GAGAL-LCSQ 276 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEEETT-EEEEECCCBC--TTS-SCCSCEEEEEESSSS-CEEEEE-STTCE-EEES
T ss_pred CCccceeEECCCCCEEEEeCCceEEEecCC-CCCeeEeccC--Ccc-cCCcceEEEEecCCC-EEEEEe-CCCeE-EEeC
Confidence 456788999999988877778888776433 2332222110 001 122357899999887 666665 46766 3444
Q ss_pred CCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEEC
Q 015363 313 RQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDI 369 (408)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~ 369 (408)
..++.- ..+.... .+...+.++.|.+++++++.|.+|.|.-++-
T Consensus 277 DgG~tW----~~~~~~~---------~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 277 DGGQTW----QQDVDVK---------KVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp STTSSC----EECGGGT---------TSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCCccc----EEcCccC---------CCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 444221 1111110 0013567888887777777888888776654
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.54 E-value=0.042 Score=48.75 Aligned_cols=188 Identities=5% Similarity=-0.032 Sum_probs=107.4
Q ss_pred EEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCcee
Q 015363 128 LYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSL 207 (408)
Q Consensus 128 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 207 (408)
+|+.+ ....|+..++.......+..... .+ ..++|.+....+ +++-...+.|
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~~~~---------~~-------~~l~~d~~~~~l-----------ywsD~~~~~I 136 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIPNLR---------NV-------VALDTEVASNRI-----------YWSDLSQRMI 136 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEECSCS---------CE-------EEEEEETTTTEE-----------EEEETTTTEE
T ss_pred eeEEe-ccceeEEEccCCcceeEeccccC---------cc-------eEEeeeeccCce-----------EEEecCCCeE
Confidence 44444 34688888888766554433211 12 268888766655 2444455667
Q ss_pred eeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCe
Q 015363 208 RLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVI 285 (408)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 285 (408)
..++ +..... ......+..........+++++.+..|..+ ..+.|.+.+++ +.....++ .......
T Consensus 137 ~~~~-~~g~~~---~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~-g~~~~~l~-------~~~~~~P 204 (400)
T 3p5b_L 137 CSTQ-LDRAHG---VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF-------RENGSKP 204 (400)
T ss_dssp EEEE-C---------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT-TCSEEEEE-------ECSSCCE
T ss_pred EEEE-cccCCC---CCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC-CCceEEEE-------eCCCCCc
Confidence 6666 322110 000111112233457789999855555544 68899999988 33333221 2223446
Q ss_pred EEEEEcCCCCceEEEEeC-CCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC--CC
Q 015363 286 TSAEFHPTHCNMLAYSSS-KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD--YM 362 (408)
Q Consensus 286 ~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--d~ 362 (408)
..|+++|.+..++.+-.. .+.|...++..... ..+.... ......|+++|++..|+.++ .+
T Consensus 205 ~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-----~~~~~~~-----------l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 205 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-----YSLVTEN-----------IQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp EEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-----EEEECSS-----------CSCEEEEEEETTTTEEEEEETTTT
T ss_pred ceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-----EEEEECC-----------CCceEEEEEEeCCCEEEEEECCCC
Confidence 899999976244444323 37888888875432 1111110 14578999999888888773 38
Q ss_pred eEEEEECCC
Q 015363 363 TLKLWDINM 371 (408)
Q Consensus 363 ~v~~wd~~~ 371 (408)
.|..+|++.
T Consensus 269 ~I~~~d~dG 277 (400)
T 3p5b_L 269 SISSIDVNG 277 (400)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 999999863
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.42 E-value=0.1 Score=50.55 Aligned_cols=208 Identities=8% Similarity=0.010 Sum_probs=112.7
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCc----EEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKK----VKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
..+..|+|.+. ++.++++-...+.|+.+++.... ...++.... ..+..+++.+.++.|
T Consensus 424 ~~~~gl~~d~~-~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l---------------~~P~GLAvD~~~~~L-- 485 (791)
T 3m0c_C 424 RNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI---------------QAPDGLAVDWIHSNI-- 485 (791)
T ss_dssp SSEEEEEEETT-TTEEEEEETTTTEEEEEEC--------CEEEECSSC---------------SCCCEEEEETTTTEE--
T ss_pred CceEEEeeccc-CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC---------------CCcceeeeeecCCcE--
Confidence 34778888643 34445555567788888887531 122222111 112256777666554
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--c-CCeEEEEeCCCCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--D-DLRINLWNLEISN 265 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~-d~~i~iwd~~~~~ 265 (408)
+++-...+.|.+.+ +.. ...+.+........+.|+++|.+..|..+ . .+.|...++. +.
T Consensus 486 ---------Y~tD~~~~~I~v~~-ldG-------~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d-G~ 547 (791)
T 3m0c_C 486 ---------YWTDSVLGTVSVAD-TKG-------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GV 547 (791)
T ss_dssp ---------EEEETTTTEEEEEE-TTS-------SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SC
T ss_pred ---------EEEecCCCeEEEEe-CCC-------CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC-CC
Confidence 24445566777666 322 11222222333457899999986666655 3 3788888887 33
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
....++ ...-.....|++++.+.+++++=.....|...++...... ..+..... .....
T Consensus 548 ~~~~lv-------~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~----~v~~~~~~----------l~~P~ 606 (791)
T 3m0c_C 548 DIYSLV-------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK----TILEDEKR----------LAHPF 606 (791)
T ss_dssp CEEEEE-------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----EEEECTTT----------TSSEE
T ss_pred ceEEEE-------eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE----EEecCCCc----------cCCCC
Confidence 333321 2223567899999877355555455678999998754321 11111100 11234
Q ss_pred EEEEccCCCEEEEe-CC-CeEEEEECCCCCCceeeee
Q 015363 346 DIKFARNGRHILSR-DY-MTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 346 ~~~~spdg~~l~s~-~d-~~v~~wd~~~~~~~~~~~~ 380 (408)
.|++. +.+|+.+ .. +.|...|..+ ++.+..+.
T Consensus 607 glav~--~~~lYwtD~~~~~I~~~dk~t-G~~~~~l~ 640 (791)
T 3m0c_C 607 SLAVF--EDKVFWTDIINEAIFSANRLT-GSDVNLLA 640 (791)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEEETTT-CCCCEEEE
T ss_pred EEEEe--CCEEEEEECCCCEEEEEeCCC-CcceEEee
Confidence 56664 3455555 33 8888888765 55555543
No 282
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.38 E-value=0.083 Score=49.46 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=24.3
Q ss_pred CCCEEEEeC-CCeEEEEECCCCCCceeeeeeccc
Q 015363 352 NGRHILSRD-YMTLKLWDINMDSGPVATFQVHEH 384 (408)
Q Consensus 352 dg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~~~ 384 (408)
.+.+|+.++ |+.++.||.++ |+.+-.++....
T Consensus 483 agg~vf~gt~dg~l~A~D~~t-G~~lW~~~l~~g 515 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDT-GDLLWKFKIPSG 515 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTT-CCEEEEEECSSC
T ss_pred cCCEEEEECCCCeEEEEECCC-CCEEEEeeCCCC
Confidence 455666664 79999999998 788888765544
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.37 E-value=0.078 Score=48.02 Aligned_cols=165 Identities=10% Similarity=0.060 Sum_probs=88.7
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEE-------ccCCCee
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSY-------MANGGCG 186 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-------~~~~~~l 186 (408)
....|+|.|..++.++++....+.|++.|+.++.+.......... . ..+..+++ .++|..+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~-----~-------~~p~~ia~~~~~~~~d~~G~~l 207 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIP-----T-------NRIRSIAFNKKIEGYADEAEYM 207 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSS-----C-------SBEEEEEECCCBTTTBCTTCEE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccc-----c-------CCCcEEEEeecccccCCCCCEE
Confidence 356788865222445555455578999999988877665432100 0 12226888 8888855
Q ss_pred ecccccccCccccCCCCCc-----e--eeeceeeecccccccc-ccceeeccccccceEEEEeCCCC-CEEEEe-cCCeE
Q 015363 187 ERNFGCASNDSSFPPGGVS-----S--LRLPVVVTSQETNLVA-GCRRIYAHAHDYHINSISNNSDG-ETFISA-DDLRI 256 (408)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~-----~--i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~-~~l~~~-~d~~i 256 (408)
+.+...+ . |.+.+ ...+..... ...+.+ .. ......++++|++ .++++- .++.|
T Consensus 208 ------------yvad~~~~~~~~~~~V~~i~--r~~~G~~~~~~~~~~v-~~-~~~p~giavdp~~g~LYvtd~~~g~V 271 (496)
T 3kya_A 208 ------------IVAIDYDGKGDESPSVYIIK--RNADGTFDDRSDIQLI-AA-YKQCNGATIHPINGELYFNSYEKGQV 271 (496)
T ss_dssp ------------EEEECCCTTGGGEEEEEEEE--CCTTSCCSTTSCEEEE-EE-ESCCCCEEECTTTCCEEEEETTTTEE
T ss_pred ------------EEEeCCCCCcccCceEEEEe--cCCCCceeecccceee-cc-CCCceEEEEcCCCCeEEEEECCCCEE
Confidence 3322221 2 33322 111111110 000111 11 1334577899955 555555 78899
Q ss_pred EEEeCC-------CCCc-----------eeeEeecCCCcccCCcCCeEEEEEcCCCCc-eEEEEeCCCeEEEEEcC
Q 015363 257 NLWNLE-------ISNQ-----------SFNIVDVKPANMEDLTEVITSAEFHPTHCN-MLAYSSSKGSIRLIDMR 313 (408)
Q Consensus 257 ~iwd~~-------~~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg~i~iwd~~ 313 (408)
..+|+. +... .-.++. . ......+.|+|+|++ . ++++-+...+|+.++..
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~-----~-~~~~~p~~ia~~p~G-~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFT-----I-ADPSWEFQIFIHPTG-KYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEE-----C-SSSSCCEEEEECTTS-SEEEEEETTTTEEEEEEEE
T ss_pred EEEecccccccccCceeecccccccccccceeEe-----c-CCCCCceEEEEcCCC-CEEEEEeCCCCEEEEEecC
Confidence 999987 3322 001111 1 123445799999999 6 45555567899996654
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.35 E-value=0.0021 Score=61.58 Aligned_cols=207 Identities=9% Similarity=-0.026 Sum_probs=104.7
Q ss_pred ceeEEEEeecCCCcEEEEE-eCCCeEEEEEcCCC----cEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeec
Q 015363 114 KINKIRWCQSANSALYLLS-TNDKTIKLWKVQEK----KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGER 188 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~-~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~ 188 (408)
.+..|+|.+. +..|+.+ ...+.|+.+++.+. ....+.... ...+..+++.+.+..|
T Consensus 407 ~p~gla~d~~--~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~---------------~~~P~glavD~~~g~L-- 467 (699)
T 1n7d_A 407 NVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD---------------IQAPDGLAVDWIHSNI-- 467 (699)
T ss_dssp TCCCCEEETT--TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSC---------------C--CCCEECCCSSSBC--
T ss_pred ceEEEccccc--cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCC---------------CCCcceEEEEeeCCcE--
Confidence 4677888643 3345444 45678888887751 111111000 0111245555443333
Q ss_pred ccccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--c-CCeEEEEeCCCCC
Q 015363 189 NFGCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--D-DLRINLWNLEISN 265 (408)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~-d~~i~iwd~~~~~ 265 (408)
+++-...+.|.+.+ +... ....+........+.|+++|.+..|+.+ . .+.|..+++.. .
T Consensus 468 ---------Y~tD~~~~~I~v~d-~dg~-------~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~ 529 (699)
T 1n7d_A 468 ---------YWTDSVLGTVSVAD-TKGV-------KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-V 529 (699)
T ss_dssp ---------EECCTTTSCEEEEB-SSSC-------CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-C
T ss_pred ---------EEEeccCCeEEEEe-cCCC-------ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-C
Confidence 24444556677665 2221 1111112222345788999976555554 3 37888887762 2
Q ss_pred ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeE
Q 015363 266 QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASIS 345 (408)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 345 (408)
....+ ....-.....|+|+|++..++++-...+.|..+++..... +.+..... ......
T Consensus 530 ~~~~l-------~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-----~~~~~~~~---------~~~~P~ 588 (699)
T 1n7d_A 530 DIYSL-------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-----KTILEDEK---------RLAHPF 588 (699)
T ss_dssp CCCEE-------SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-----EEECCCSS---------SCSSCC
T ss_pred CeeEE-------EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce-----EEEEecCC---------cCCCce
Confidence 22111 1112234568999998746666666678999999875322 11111000 001233
Q ss_pred EEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 346 DIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 346 ~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
.|++..+ .++++.. .+.|..++..+ ++.++.+.
T Consensus 589 glavd~~-~lywtd~~~~~V~~~d~~~-G~~~~~i~ 622 (699)
T 1n7d_A 589 SLAVFED-KVFWTDIINEAIFSANRLT-GSDVNLLA 622 (699)
T ss_dssp CCEEETT-EEEEECSTTTCEEEEETTT-EEEEECCC
T ss_pred EeEEECC-EEEEEeCCCCeEEEEEccC-CCceEEee
Confidence 4555443 3333433 48999998765 55555543
No 285
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.32 E-value=0.059 Score=46.62 Aligned_cols=73 Identities=10% Similarity=0.102 Sum_probs=44.5
Q ss_pred CCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEcc-CCCEEEEeC-
Q 015363 283 EVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFAR-NGRHILSRD- 360 (408)
Q Consensus 283 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp-dg~~l~s~~- 360 (408)
...+.++|+||+..++++-+..++|..|++.....+ ...+.+.. .+..-.+++.+ +|++.+++.
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l-~~~~~~~~-------------~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL-TPLRVLSF-------------DTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE-EEEEEEEC-------------SSEEEEEEECTTTCCEEEEEES
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcE-ecCEEEeC-------------CCCCceEEEeCCCCcEEEEecC
Confidence 345889999999344444456789999998743211 11122211 14567889999 599877663
Q ss_pred C-CeEEEEEC
Q 015363 361 Y-MTLKLWDI 369 (408)
Q Consensus 361 d-~~v~~wd~ 369 (408)
+ +.|..|+-
T Consensus 287 ~g~~v~~~~P 296 (355)
T 3sre_A 287 NGMRIFFYDA 296 (355)
T ss_dssp CHHHHHSCCT
T ss_pred CceEEEEECC
Confidence 4 44444443
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.30 E-value=0.099 Score=48.89 Aligned_cols=64 Identities=17% Similarity=0.163 Sum_probs=40.1
Q ss_pred CCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEEEEECCCCCCceeeeeec
Q 015363 304 KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLKLWDINMDSGPVATFQVH 382 (408)
Q Consensus 304 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~~~ 382 (408)
+|.|..||+.+++..- ...... .+..-.....+.+++.++ |+.++.||.++ |+.+-.++..
T Consensus 465 ~G~l~A~D~~tG~~~W----~~~~~~-------------~~~~g~~~tagglvf~g~~dg~l~A~D~~t-G~~lW~~~~~ 526 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVW----EHKEHL-------------PLWAGVLATAGNLVFTGTGDGYFKAFDAKS-GKELWKFQTG 526 (582)
T ss_dssp SEEEEEECTTTCCEEE----EEEESS-------------CCCSCCEEETTTEEEEECTTSEEEEEETTT-CCEEEEEECS
T ss_pred cceEEEEECCCCCEEE----EecCCC-------------CCcccceEeCCCEEEEECCCCcEEEEECCC-CCEEEEecCC
Confidence 5789999999987542 111110 111111112355666675 79999999998 7988888775
Q ss_pred ccc
Q 015363 383 EHL 385 (408)
Q Consensus 383 ~~~ 385 (408)
...
T Consensus 527 ~g~ 529 (582)
T 1flg_A 527 SGI 529 (582)
T ss_dssp SCC
T ss_pred CCc
Confidence 544
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.28 E-value=0.07 Score=45.59 Aligned_cols=203 Identities=13% Similarity=0.027 Sum_probs=113.6
Q ss_pred ccceEEEEECCC-CCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 35 VDIISAIEFDKS-GDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 35 ~~~V~~~~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
...+.+++|++. +.++.+-...+.|..++.++.... ...+...- .
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~----------------------~~~~~~~l------------~ 79 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV----------------------QNVVVSGL------------L 79 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC----------------------CEEEEECC------------S
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce----------------------EEEEcCCC------------C
Confidence 345678999986 444455456678888887655210 00111111 2
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
....+++.+. ++.++++-...+.|.+.++............. ..+..++..|.+..+
T Consensus 80 ~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~---------------~~P~giavdp~~g~l------- 136 (318)
T 3sov_A 80 SPDGLACDWL-GEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL---------------DQPRAIALDPSSGFM------- 136 (318)
T ss_dssp CCCEEEEETT-TTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------------SSEEEEEEEGGGTEE-------
T ss_pred CccEEEEEcC-CCeEEEEECCCCEEEEEECCCCcEEEEEeCCC---------------CCccEEEEeCCCCEE-------
Confidence 2556777432 34455555567889999987654333322111 112257777765554
Q ss_pred cCccccCCC--CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceee
Q 015363 194 SNDSSFPPG--GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 194 ~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~ 269 (408)
+... ..+.|...+ ... .....+....-...+.++++|++..|..+ ..+.|..+|++ +.....
T Consensus 137 -----y~td~~~~~~I~r~~-~dG-------~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~ 202 (318)
T 3sov_A 137 -----YWTDWGEVPKIERAG-MDG-------SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQA 202 (318)
T ss_dssp -----EEEECSSSCEEEEEE-TTS-------CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEE
T ss_pred -----EEEecCCCCEEEEEE-cCC-------CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC-CCceEE
Confidence 2222 234555544 211 11111112222456899999987777766 67899999987 332222
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCce
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSAL 317 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 317 (408)
++ .........+++..+ .++.+-...+.|..++..+++.
T Consensus 203 ~~-------~~~~~~P~glav~~~--~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 203 VV-------KGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EE-------CSCCSCEEEEEEETT--EEEEEETTTTEEEEEETTTCCS
T ss_pred Ee-------cCCCCCceEEEEeCC--EEEEEecCCCeEEEEECCCCCc
Confidence 21 222344567777643 5666766778999999877754
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.25 E-value=0.0064 Score=58.29 Aligned_cols=209 Identities=9% Similarity=-0.010 Sum_probs=108.3
Q ss_pred cceEEEEECCCCCeEEEee-cCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccc
Q 015363 36 DIISAIEFDKSGDHLATGD-RGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEK 114 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~ 114 (408)
..+..|+|++.+..|+... ..+.|+.+++.+.... .. ....+.... ..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~-~~------------------~~~~i~~~~------------~~ 454 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-SS------------------YDTVISRDI------------QA 454 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC--CC------------------CCCBCCSCC--------------
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCC-cc------------------eEEEEeCCC------------CC
Confidence 4566888988766555543 4578888887652100 00 000010000 12
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccccccc
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCAS 194 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (408)
...|++.+. .+.++++-...+.|.+.++.......+...... .+..+++.|.+..|
T Consensus 455 P~glavD~~-~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~---------------~P~giavDp~~g~l-------- 510 (699)
T 1n7d_A 455 PDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGS---------------KPRAIVVDPVHGFM-------- 510 (699)
T ss_dssp CCCEECCCS-SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSC---------------CCCCEECCSSSSCC--------
T ss_pred cceEEEEee-CCcEEEEeccCCeEEEEecCCCceEEEEeCCCC---------------CcceEEEccCCCcE--------
Confidence 445666322 244555545678899999886654444322111 11256777765554
Q ss_pred CccccCCCC-CceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceeeEe
Q 015363 195 NDSSFPPGG-VSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 195 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~ 271 (408)
+++-.. .+.|..++ +.... .+.+....-...+.|+|+|++..|..+ ..+.|..+++. +.....++
T Consensus 511 ---y~td~~~~~~I~~~~-~dG~~-------~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d-G~~~~~~~ 578 (699)
T 1n7d_A 511 ---YWTDWGTPAKIKKGG-LNGVD-------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTIL 578 (699)
T ss_dssp ---EECCCSSSCCEEBCC-SSSCC-------CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS-SSCCEEEC
T ss_pred ---EEcccCCCCeEEEEe-CCCCC-------eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC-CCceEEEE
Confidence 122212 25565544 22111 111111122446789999987666655 67899999997 33322221
Q ss_pred ecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee
Q 015363 272 DVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 272 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
. ..........|++..+ .++++....+.|..++..+++..
T Consensus 579 ~-----~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 579 E-----DEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp C-----CSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEE
T ss_pred e-----cCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCce
Confidence 1 1111122345566544 56666667789999998777544
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.24 E-value=0.11 Score=47.04 Aligned_cols=178 Identities=9% Similarity=0.012 Sum_probs=92.1
Q ss_pred eeeEEccCCCeeecccccccCccccCCCCCceeeeceeee-------cccc-cc--ccc--cc-eeeccccccceEEEEe
Q 015363 175 IPKSYMANGGCGERNFGCASNDSSFPPGGVSSLRLPVVVT-------SQET-NL--VAG--CR-RIYAHAHDYHINSISN 241 (408)
Q Consensus 175 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~-~~--~~~--~~-~~~~~~~~~~v~~i~~ 241 (408)
..++.+|++..| +++-..++.|..+| +. .... .. ... .. ..+........+.|+|
T Consensus 250 ~giavdp~~g~L-----------Yvtd~~~g~V~r~d-~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~ 317 (496)
T 3kya_A 250 NGATIHPINGEL-----------YFNSYEKGQVFRLD-LVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFI 317 (496)
T ss_dssp CCEEECTTTCCE-----------EEEETTTTEEEEEC-HHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEE
T ss_pred eEEEEcCCCCeE-----------EEEECCCCEEEEEe-cccccccccCceeecccccccccccceeEecCCCCCceEEEE
Confidence 367788855554 25566777788888 43 1111 00 000 00 1111222345678999
Q ss_pred CCCCCEEEEe--cCCeEEEEeCCCCCcee----eEeec-CCCcc------cCCcCCeE-EEEEc-------CCCCceEEE
Q 015363 242 NSDGETFISA--DDLRINLWNLEISNQSF----NIVDV-KPANM------EDLTEVIT-SAEFH-------PTHCNMLAY 300 (408)
Q Consensus 242 ~~~~~~l~~~--~d~~i~iwd~~~~~~~~----~~~~~-~~~~~------~~~~~~v~-~~~~~-------p~~~~~l~s 300 (408)
+|+++.|..+ ....|+.++.......+ .+... ....+ ...-.... .+... +++ .++++
T Consensus 318 ~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVa 396 (496)
T 3kya_A 318 HPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY-DFYFV 396 (496)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE-EEEEE
T ss_pred cCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCC-eEEEE
Confidence 9999966655 67889987765222111 11110 00000 00112234 45554 456 67777
Q ss_pred EeCCCeEEEEEcCCCceecccccccccccCC---------CCc---cccccccceeEEEEEccC-CCEEEEeC-CCeEEE
Q 015363 301 SSSKGSIRLIDMRQSALCDTHSKLFEEQEAP---------GTR---SFFTEIIASISDIKFARN-GRHILSRD-YMTLKL 366 (408)
Q Consensus 301 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~h~~~i~~~~~spd-g~~l~s~~-d~~v~~ 366 (408)
=....+|+.++ ..+.. .++.+.... ... ......-.....|+++++ |.+.++=. ...|+.
T Consensus 397 D~~N~rIr~i~-~~G~v-----~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrk 470 (496)
T 3kya_A 397 DRLNFCVRKVT-PEGIV-----STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRT 470 (496)
T ss_dssp EGGGTEEEEEC-TTCBE-----EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ECCCCEEEEEe-CCCCE-----EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEE
Confidence 67788999998 44532 333322100 000 000111235788999997 65555544 489999
Q ss_pred EECCC
Q 015363 367 WDINM 371 (408)
Q Consensus 367 wd~~~ 371 (408)
+++..
T Consensus 471 i~~~~ 475 (496)
T 3kya_A 471 ISMEQ 475 (496)
T ss_dssp EEECC
T ss_pred EECCC
Confidence 99975
No 290
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.19 E-value=0.097 Score=45.50 Aligned_cols=65 Identities=12% Similarity=0.174 Sum_probs=39.7
Q ss_pred CCeEEEEEc-------CCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCE
Q 015363 283 EVITSAEFH-------PTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRH 355 (408)
Q Consensus 283 ~~v~~~~~~-------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~ 355 (408)
.....+.|. .+| .++++.-..+.|...++............+.+. ...+.++++.|||.+
T Consensus 259 ~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~------------~~rp~~v~~~pDG~l 325 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNV------------FGRLRDVVIDDDGGI 325 (354)
T ss_dssp CCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTTT------------SCCEEEEEECTTSCE
T ss_pred cCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccCC------------CCCeeEEEECCCCcE
Confidence 346788883 566 777776667888888887532110000111111 246899999999987
Q ss_pred EEEeC
Q 015363 356 ILSRD 360 (408)
Q Consensus 356 l~s~~ 360 (408)
.++..
T Consensus 326 yv~~~ 330 (354)
T 3a9g_A 326 LISTS 330 (354)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 76653
No 291
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.13 E-value=0.28 Score=49.75 Aligned_cols=33 Identities=6% Similarity=-0.006 Sum_probs=27.4
Q ss_pred ccceEEEEECCC------CCeEEEeec-CCeEEEEEeCCC
Q 015363 35 VDIISAIEFDKS------GDHLATGDR-GGRVVLFERTDT 67 (408)
Q Consensus 35 ~~~V~~~~~s~~------~~~l~sg~~-dg~i~iw~~~~~ 67 (408)
.+.|.|+++.|. ++++|.|.. |++|+|+++.+.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 467999999863 469999996 999999998754
No 292
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.05 E-value=0.13 Score=44.58 Aligned_cols=73 Identities=8% Similarity=0.202 Sum_probs=43.1
Q ss_pred CCeEEEEEcC-------CCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCE
Q 015363 283 EVITSAEFHP-------THCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRH 355 (408)
Q Consensus 283 ~~v~~~~~~p-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~ 355 (408)
..+..+.|.+ ++ .++++.-..+.|...++..++.... ...+. .....+..+++.|||.+
T Consensus 271 ~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~~~~~~~-~~~~~------------~~~~rp~~v~~~pdG~l 336 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNGDKVTED-GRILT------------DRGQRIRDVRTGPDGYL 336 (353)
T ss_dssp CCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEETTEEEEE-EEESG------------GGCCCEEEEEECTTSCE
T ss_pred cCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCCCeEeee-EEccc------------CCCCceeEEEECCCCcE
Confidence 3467788764 45 6777766778888888775432210 01111 11247899999999997
Q ss_pred EEEeCCCeEEEEEC
Q 015363 356 ILSRDYMTLKLWDI 369 (408)
Q Consensus 356 l~s~~d~~v~~wd~ 369 (408)
.++.+...=+||.+
T Consensus 337 yv~td~~~g~I~ri 350 (353)
T 2g8s_A 337 YVLTDESSGELLKV 350 (353)
T ss_dssp EEEECSTTEEEEEE
T ss_pred EEEEeCCCCEEEEE
Confidence 76654222244444
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.92 E-value=0.16 Score=43.49 Aligned_cols=151 Identities=11% Similarity=0.046 Sum_probs=82.6
Q ss_pred ccceEEEEeCCCCCEEEEecCCeEEE-EeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEE
Q 015363 233 DYHINSISNNSDGETFISADDLRINL-WNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLID 311 (408)
Q Consensus 233 ~~~v~~i~~~~~~~~l~~~~d~~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 311 (408)
...+..+++.+++.+++.+.++.+.. .|- .+...+.+. ......+..+.+.+++ .+++ ++.+|.+++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~--gG~tW~~~~------~~~~~~~~~~~~~~~g-~~~~-~~~~G~~~~s~ 231 (327)
T 2xbg_A 162 IGVMRNLNRSPSGEYVAVSSRGSFYSTWEP--GQTAWEPHN------RTTSRRLHNMGFTPDG-RLWM-IVNGGKIAFSD 231 (327)
T ss_dssp CCCEEEEEECTTSCEEEEETTSSEEEEECT--TCSSCEEEE------CCSSSCEEEEEECTTS-CEEE-EETTTEEEEEE
T ss_pred CcceEEEEEcCCCcEEEEECCCcEEEEeCC--CCCceeECC------CCCCCccceeEECCCC-CEEE-EeCCceEEEec
Confidence 35688899999999888885555433 332 122222221 1234567889999998 6554 45678887764
Q ss_pred cCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCceeeeeec---ccccce
Q 015363 312 MRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVH---EHLRPK 388 (408)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~~~---~~~~~~ 388 (408)
...++.- ..+..... .+...+.++.+.+++.+++++.++.| ++..+. ++....+... ......
T Consensus 232 ~D~G~tW----~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~Dg-G~tW~~~~~~~~~~~~~~~ 297 (327)
T 2xbg_A 232 PDNSENW----GELLSPLR--------RNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDG-GQTWQQDVDVKKVPSNFYK 297 (327)
T ss_dssp TTEEEEE----CCCBCTTS--------SCCSCEEEEEESSSSCEEEEESTTCE-EEESST-TSSCEECGGGTTSSSCCCE
T ss_pred CCCCCee----EeccCCcc--------cCCcceEEEEecCCCEEEEEeCCCeE-EEeCCC-CcccEEcCccCCCCCCeEE
Confidence 3323211 11110000 00135788999998998888888777 444543 5555554422 112223
Q ss_pred EEecCCCeeeeeeceeeec
Q 015363 389 VMHSSKNYFMGLDNIHTLY 407 (408)
Q Consensus 389 ~~~~~~~~~~~~d~~~~~~ 407 (408)
+...-.+.++++....++|
T Consensus 298 v~~~~~~~~~~~G~~G~i~ 316 (327)
T 2xbg_A 298 ILFFSPDQGFILGQKGILL 316 (327)
T ss_dssp EEEEETTEEEEECSTTEEE
T ss_pred EEEECCCceEEEcCCceEE
Confidence 3222344455554444443
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.88 E-value=0.31 Score=45.98 Aligned_cols=185 Identities=10% Similarity=0.029 Sum_probs=107.0
Q ss_pred EEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCcee
Q 015363 128 LYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVSSL 207 (408)
Q Consensus 128 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 207 (408)
+|+.+ ....|+..++.+...........- ..+..+++.+....+ +++-..++.|
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~--------------~~~~~l~~d~~~~~l-----------ywtD~~~~~I 61 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGV--------------KEASALDFDVTDNRI-----------YWTDISLKTI 61 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSC--------------SCEEEEEEETTTTEE-----------EEEETTTTEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCC--------------CceEEEEEECCCCEE-----------EEEECCCCeE
Confidence 44444 566888889887654333222110 112267888876665 2444456666
Q ss_pred eeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCe
Q 015363 208 RLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVI 285 (408)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 285 (408)
..++ +.... ...+..........+++++.+..|..+ ..+.|.+.+++ +.....++ ...-...
T Consensus 62 ~r~~-~~g~~-------~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~~~~~l~-------~~~l~~P 125 (628)
T 4a0p_A 62 SRAF-MNGSA-------LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD-GQHRQVLV-------WKDLDSP 125 (628)
T ss_dssp EEEE-TTSCS-------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-STTCEEEE-------CSSCCCE
T ss_pred EEEE-CCCCC-------cEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC-CCcEEEEE-------eCCCCCc
Confidence 6655 22211 111112122346688888776666555 67899999997 33222221 1223446
Q ss_pred EEEEEcCCCCceEEEE-eCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC--CC
Q 015363 286 TSAEFHPTHCNMLAYS-SSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD--YM 362 (408)
Q Consensus 286 ~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~--d~ 362 (408)
..|+++|....++.+- +..+.|...++..... ..+... ......+++++++..|+.++ .+
T Consensus 126 ~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-----~~l~~~------------~~~P~GlalD~~~~~LY~aD~~~~ 188 (628)
T 4a0p_A 126 RALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-----TTLVPN------------VGRANGLTIDYAKRRLYWTDLDTN 188 (628)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----EEEECS------------CSSEEEEEEETTTTEEEEEETTTT
T ss_pred ccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-----EEEECC------------CCCcceEEEccccCEEEEEECCCC
Confidence 8999999652444443 2256888888765432 111111 14578999999888888773 38
Q ss_pred eEEEEECCC
Q 015363 363 TLKLWDINM 371 (408)
Q Consensus 363 ~v~~wd~~~ 371 (408)
.|...|++.
T Consensus 189 ~I~~~d~dG 197 (628)
T 4a0p_A 189 LIESSNMLG 197 (628)
T ss_dssp EEEEEETTS
T ss_pred EEEEEcCCC
Confidence 999999964
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.86 E-value=0.2 Score=43.46 Aligned_cols=62 Identities=3% Similarity=-0.019 Sum_probs=36.6
Q ss_pred CeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceec--ccccccccccCCCCccccccccceeEEEEEccCCCEEEEe
Q 015363 284 VITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCD--THSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR 359 (408)
Q Consensus 284 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~ 359 (408)
....++| .+| .++++.-..+.|...++....... .....+... ...+.++++.|||.+.++.
T Consensus 269 ap~G~~~-~~G-~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~------------~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 269 PPGNLAF-FRG-DLYVAGLRGQALLRLVLEGERGRWRVLRVETALSG------------FGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp CEEEEEE-ETT-EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEES------------SCCEEEEEECTTSCEEEEE
T ss_pred CCcceEE-ECC-EEEEEECCCCEEEEEEECCCCcceeecchheeccc------------CCCeeEEEECCCCcEEEEE
Confidence 4567777 466 676666667778877776432100 000111111 2468999999999877765
No 296
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.84 E-value=0.13 Score=44.44 Aligned_cols=145 Identities=8% Similarity=0.145 Sum_probs=80.0
Q ss_pred CCCceeeeceeeeccccccccccceee---ccccccceEEEEeCC--CCC--EEEEe-c--CCeEEEEeCCCCCceeeEe
Q 015363 202 GGVSSLRLPVVVTSQETNLVAGCRRIY---AHAHDYHINSISNNS--DGE--TFISA-D--DLRINLWNLEISNQSFNIV 271 (408)
Q Consensus 202 ~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~i~~~~--~~~--~l~~~-~--d~~i~iwd~~~~~~~~~~~ 271 (408)
..+|.|.++| ........ ..+... ..........+.+.+ ++. ++++- . +.+|.+|+++........+
T Consensus 80 ~~~G~I~~~d-~~~~~~~~--~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~ 156 (355)
T 3sre_A 80 DKSGKILLMD-LNEKEPAV--SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL 156 (355)
T ss_dssp --CCEEEEEE-TTSSSCCE--EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE
T ss_pred CCCCeEEEEe-cCCCCCce--EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE
Confidence 3678888888 43211111 111110 011234566777655 453 44443 3 6789999887544433332
Q ss_pred ecCCCcccC-CcCCeEEEEEcCCCCceEEEEeC-----------------CCeEEEEEcCCCceecccccccccccCCCC
Q 015363 272 DVKPANMED-LTEVITSAEFHPTHCNMLAYSSS-----------------KGSIRLIDMRQSALCDTHSKLFEEQEAPGT 333 (408)
Q Consensus 272 ~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 333 (408)
. ++.+ .-...+.+.+.++| .++++... .|.|..+|. ++ + ..+...
T Consensus 157 ~----~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~----~~~~~~----- 219 (355)
T 3sre_A 157 K----TIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-V----RVVAEG----- 219 (355)
T ss_dssp E----EECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-C----EEEEEE-----
T ss_pred e----ccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-E----EEeecC-----
Confidence 1 1221 12457899999999 77766541 244554544 21 1 111111
Q ss_pred ccccccccceeEEEEEccCCCEEEEeC--CCeEEEEECCCCC
Q 015363 334 RSFFTEIIASISDIKFARNGRHILSRD--YMTLKLWDINMDS 373 (408)
Q Consensus 334 ~~~~~~h~~~i~~~~~spdg~~l~s~~--d~~v~~wd~~~~~ 373 (408)
....+.++||||++.|+.++ .+.|..|+++.++
T Consensus 220 -------l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g 254 (355)
T 3sre_A 220 -------FDFANGINISPDGKYVYIAELLAHKIHVYEKHANW 254 (355)
T ss_dssp -------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred -------CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCC
Confidence 13568999999999888873 3899999997533
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.83 E-value=0.19 Score=42.71 Aligned_cols=182 Identities=10% Similarity=0.089 Sum_probs=96.9
Q ss_pred eeEEEEeecCCCcEEEEEe-CCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEE---ccCCCeeeccc
Q 015363 115 INKIRWCQSANSALYLLST-NDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSY---MANGGCGERNF 190 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~l~~~~ 190 (408)
--+++|.+. ++ .|..++ ..++|..|+...+....+ ....-. ...+..... ..+.+ .|+++.+....
T Consensus 15 PE~~~wd~~-~g-~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s--~~g~~~~~~-----sGl~~~~~D~~grL~vv~~ 84 (334)
T 2p9w_A 15 PEDTIYDRT-RQ-VFYQSNLYKGRIEVYNPKTQSHFNV-VIDGAS--SNGDGEQQM-----SGLSLLTHDNSKRLFAVMK 84 (334)
T ss_dssp CSCEEEETT-TT-EEEEEETTTTEEEEECTTTCCEEEE-CCTTTC--CSSCCSEEE-----EEEEESSSSSCCEEEEEEE
T ss_pred CcCccCcCC-CC-EEEEEeccCCEEEEEcCCCCeEEEE-ecCCcc--ccCCCccee-----eEEEEeccCCCCcEEEEEc
Confidence 457889643 34 555555 799999999986655444 221100 000111111 15677 46766653211
Q ss_pred ccccCccccCC---CCCceeeeceeee---ccccccccccceeeccc-------cccceEEEEeCCCCCEEEEe-cC-Ce
Q 015363 191 GCASNDSSFPP---GGVSSLRLPVVVT---SQETNLVAGCRRIYAHA-------HDYHINSISNNSDGETFISA-DD-LR 255 (408)
Q Consensus 191 ~~~~~~~~~~~---~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-------~~~~v~~i~~~~~~~~l~~~-~d-~~ 255 (408)
....+-..+ +.+..|..|| +. ..+....... .....+ -......++..++|+..+++ .. +.
T Consensus 85 --~~~af~~~g~~~~g~~~v~~~D-l~~~~tg~~~~~~dL-~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~ 160 (334)
T 2p9w_A 85 --NAKSFNFADQSSHGASSFHSFN-LPLSENSKPVWSVNF-EKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA 160 (334)
T ss_dssp --ETTTTCTTSCCSSSCCEEEEEE-SSCCTTCCCSEEEES-HHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE
T ss_pred --ccccccccccccCCCCEEEEEc-CCcCCCCCEEEEecC-ccccccccccccccccCCceeEECCCCCEEEeCCCCCCe
Confidence 000111111 2356677777 44 1111100000 000000 11358899999999999987 66 77
Q ss_pred EEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCC
Q 015363 256 INLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQ 314 (408)
Q Consensus 256 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 314 (408)
|...+.. +. .......... ........+.|+++|++ ++|++...++.|..+|++.
T Consensus 161 I~rV~pd-G~-~~~~~~~~~~-~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 161 IARVSAD-GK-TVSTFAWESG-NGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEECTT-SC-CEEEEEECCC-CSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSS
T ss_pred EEEEeCC-CC-EEeeeeecCC-CcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCC
Confidence 7777766 33 2222111110 11123346789999999 7777776699999999984
No 298
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.75 E-value=0.11 Score=48.53 Aligned_cols=57 Identities=7% Similarity=0.017 Sum_probs=36.2
Q ss_pred cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee
Q 015363 252 DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 252 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
.++.|..||+.+++...+.- .. ....... +.. .+ .+++.++.|+.++.||.++++.+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~-~~---~~~~~g~---~~t--ag-glvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHK-EH---LPLWAGV---LAT--AG-NLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEE-ES---SCCCSCC---EEE--TT-TEEEEECTTSEEEEEETTTCCEE
T ss_pred CcceEEEEECCCCCEEEEec-CC---CCCcccc---eEe--CC-CEEEEECCCCcEEEEECCCCCEE
Confidence 36889999998666554431 10 1111111 111 24 56777999999999999999765
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.74 E-value=0.041 Score=48.25 Aligned_cols=125 Identities=11% Similarity=0.182 Sum_probs=78.1
Q ss_pred ceEEEEeCCCCCEEEEecCCeEEEEeCCCCCc-----------eeeEeecCCCcccCCcCCeEEEEEcCCCC--ceEEEE
Q 015363 235 HINSISNNSDGETFISADDLRINLWNLEISNQ-----------SFNIVDVKPANMEDLTEVITSAEFHPTHC--NMLAYS 301 (408)
Q Consensus 235 ~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~l~s~ 301 (408)
.+..+..+|+|++||...+..|.|-.+..+.. ....+.+.+.+ ......|..+.|+|-+. ..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~-~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEE-VGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC---CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcc-cCCCCceeEEEeccccCCCCeEEEE
Confidence 46678999999999998778999988873211 11223332211 11357799999999763 378888
Q ss_pred eCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEE--eCC-CeEEE
Q 015363 302 SSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILS--RDY-MTLKL 366 (408)
Q Consensus 302 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s--~~d-~~v~~ 366 (408)
..|+.|++||+..... .|. .+.... ...-+......|.+++|.+++-.|.. .++ |.|+-
T Consensus 146 tsD~~Ir~yDl~~s~~--~P~-~L~k~~---~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQE--KPI-VLNKPN---NSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTS--CCE-EESCCC---SEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCC--CCc-chhccc---cccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 9999999999987321 222 222110 00011122356889999998765555 333 66654
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.62 E-value=0.28 Score=42.01 Aligned_cols=109 Identities=13% Similarity=0.132 Sum_probs=66.3
Q ss_pred ccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCC----ceeeEee
Q 015363 198 SFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA-DDLRINLWNLEISN----QSFNIVD 272 (408)
Q Consensus 198 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~----~~~~~~~ 272 (408)
++....++.+..|++..........+.++.+.. ...+..+...+....|..+ ++..|..++.+... ..+..+.
T Consensus 146 afV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l--gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 146 AMVTGKEGEFEQYELKADKNGYISGKKVRAFKM--NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp EEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred EEEECCCCeEEEEEEEeCCCCcccceEEEEecC--CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence 377788899999994333344344555555522 3467788889888888888 77667666754221 1222210
Q ss_pred cCCCcccCCcCCeEEEEE--cCCCC-ceEEEEeCCCeEEEEEcC
Q 015363 273 VKPANMEDLTEVITSAEF--HPTHC-NMLAYSSSKGSIRLIDMR 313 (408)
Q Consensus 273 ~~~~~~~~~~~~v~~~~~--~p~~~-~~l~s~~~dg~i~iwd~~ 313 (408)
...-...+..|++ .+++. .+|+++-.+.+..+||..
T Consensus 224 -----~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 224 -----GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp -----SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred -----CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 1112235777777 55553 344444467899999997
No 301
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.56 E-value=0.12 Score=43.91 Aligned_cols=123 Identities=11% Similarity=0.131 Sum_probs=78.5
Q ss_pred ceEEEEe---CCCCCEEEEec--------------CCeEEEEeCC---CCCceeeEeecCCCcccC-------CcCCeEE
Q 015363 235 HINSISN---NSDGETFISAD--------------DLRINLWNLE---ISNQSFNIVDVKPANMED-------LTEVITS 287 (408)
Q Consensus 235 ~v~~i~~---~~~~~~l~~~~--------------d~~i~iwd~~---~~~~~~~~~~~~~~~~~~-------~~~~v~~ 287 (408)
.+..|.| .|+++++++.. +..|..||+. +++.... +++... ..+ .......
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~-~~~~~~~~g~~~~~~nD 141 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWS-VNFEKV-QDEFEKKAGKRPFGVVQ 141 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEE-EESHHH-HHHHHHHHSSCCEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEE-ecCccc-cccccccccccccCCce
Confidence 4578999 68888887542 5779999988 4444332 221100 000 1124789
Q ss_pred EEEcCCCCceEEEEeCC-CeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC-CCeEE
Q 015363 288 AEFHPTHCNMLAYSSSK-GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD-YMTLK 365 (408)
Q Consensus 288 ~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~-d~~v~ 365 (408)
++..++| +..++++.. +.|...+...... ..+.... + ........+.|+++|+|+.|++.. .+.+.
T Consensus 142 vavD~~G-naYVt~s~~~~~I~rV~pdG~~~-----~~~~~~~-~-----~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~ 209 (334)
T 2p9w_A 142 SAQDRDG-NSYVAFALGMPAIARVSADGKTV-----STFAWES-G-----NGGQRPGYSGITFDPHSNKLIAFGGPRALT 209 (334)
T ss_dssp EEECTTS-CEEEEEEESSCEEEEECTTSCCE-----EEEEECC-C-----CSSSCCSCSEEEEETTTTEEEEESSSSSEE
T ss_pred eEECCCC-CEEEeCCCCCCeEEEEeCCCCEE-----eeeeecC-C-----CcccccCcceEEEeCCCCEEEEEcCCCeEE
Confidence 9999999 888888888 8887777664322 1111110 0 000013467899999999888874 69999
Q ss_pred EEECCC
Q 015363 366 LWDINM 371 (408)
Q Consensus 366 ~wd~~~ 371 (408)
-+|++.
T Consensus 210 ~fD~~~ 215 (334)
T 2p9w_A 210 AFDVSK 215 (334)
T ss_dssp EEECSS
T ss_pred EEcCCC
Confidence 999874
No 302
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.50 E-value=0.35 Score=41.63 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=24.9
Q ss_pred ccceEEEEECCCCCeEEEeecCCeEEEEEeCCC
Q 015363 35 VDIISAIEFDKSGDHLATGDRGGRVVLFERTDT 67 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~ 67 (408)
-...+.|+|.|+|+++++-...|.|++++..++
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCC
Confidence 345689999999997766654899998875443
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.40 E-value=0.66 Score=43.70 Aligned_cols=203 Identities=8% Similarity=0.036 Sum_probs=107.6
Q ss_pred cceeEEEEeecCCCcEEEEE-eCCCeEEEEEcCCCcE-EEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeeccc
Q 015363 113 EKINKIRWCQSANSALYLLS-TNDKTIKLWKVQEKKV-KKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNF 190 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~-~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~ 190 (408)
..+..|+|.+. +..|..+ ...+.|..+++..... ..+..... ..+..+++.+.+..+
T Consensus 40 ~~~~~ld~~~~--~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~---------------~~P~GlAvD~~~~~l---- 98 (619)
T 3s94_A 40 EDAAAVDFVFS--HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL---------------LSPDGLACDWLGEKL---- 98 (619)
T ss_dssp SCEEEEEEETT--TTEEEEEETTTTEEEEEEC-----CEEEECSSC---------------SCEEEEEEETTTTEE----
T ss_pred CceEEEEEEeC--CCEEEEEECCCCeEEEEEccCCCceEEEEeCCC---------------CCcCeEEEEecCCEE----
Confidence 34778899653 3345444 4567888888875532 22221110 112257777765554
Q ss_pred ccccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe---cCCeEEEEeCCCCCce
Q 015363 191 GCASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA---DDLRINLWNLEISNQS 267 (408)
Q Consensus 191 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~---~d~~i~iwd~~~~~~~ 267 (408)
+++-...+.|.+.+ +.. ...+.+....-...+.|+++|.+..|..+ ..+.|...+++ +...
T Consensus 99 -------y~~d~~~~~I~v~~-~dG-------~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~ 162 (619)
T 3s94_A 99 -------YWTDSETNRIEVSN-LDG-------SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSR 162 (619)
T ss_dssp -------EEEETTTTEEEEEE-TTS-------CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSC
T ss_pred -------EEEeCCCCEEEEEE-CCC-------CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCce
Confidence 24445567777666 222 11112222233456789999976555544 25677777776 3333
Q ss_pred eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEE
Q 015363 268 FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDI 347 (408)
Q Consensus 268 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 347 (408)
..++ ...-.....|++++++.+++++=...+.|...|+...... ....+. ......+
T Consensus 163 ~~l~-------~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~----~~~~~~------------~~~P~gi 219 (619)
T 3s94_A 163 FIII-------NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ----AVVKGS------------LPHPFAL 219 (619)
T ss_dssp EEEE-------CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-------------------------CCCE
T ss_pred EEEE-------eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccE----EEEeCC------------CCCceEE
Confidence 2221 1223456899999976355555556788999998754321 111111 0123456
Q ss_pred EEccCCCEEEEeC--CCeEEEEECCCCCCceee
Q 015363 348 KFARNGRHILSRD--YMTLKLWDINMDSGPVAT 378 (408)
Q Consensus 348 ~~spdg~~l~s~~--d~~v~~wd~~~~~~~~~~ 378 (408)
++..+ .|+.++ .+.|...|..+ ++....
T Consensus 220 ~~~~~--~ly~td~~~~~V~~~d~~t-g~~~~~ 249 (619)
T 3s94_A 220 TLFED--ILYWTDWSTHSILACNKYT-GEGLRE 249 (619)
T ss_dssp EESSS--EEEEECTTTCSEEEEESSS-CCCCEE
T ss_pred EEeCC--EEEEecCCCCEEEEEECCC-CcccEE
Confidence 66654 555553 48898888876 444333
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.34 E-value=0.19 Score=43.54 Aligned_cols=114 Identities=14% Similarity=0.104 Sum_probs=63.3
Q ss_pred cceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCC---CCceEEEEeCC-----C
Q 015363 234 YHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPT---HCNMLAYSSSK-----G 305 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~d-----g 305 (408)
.....++|.|+|+++++-.++.|.+++ . .. ...+..+. ...........|+++|+ +..++++-..+ .
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~-~-g~-~~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR-E-GR-LSTYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE-T-TE-EEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE-C-CC-ccEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 346789999999977776669999998 3 22 21121111 12222456789999998 42555554433 6
Q ss_pred eEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe
Q 015363 306 SIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR 359 (408)
Q Consensus 306 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~ 359 (408)
.|..++...+... .....+...... .-..| ....++|.|||.+.++-
T Consensus 106 ~v~r~~~~~~~~~-~~~~l~~~~p~~----~~~~h--~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 106 QVVRLRHLGERGV-LDRVVLDGIPAR----PHGLH--SGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEEECSSCEE-EEEEEEEEECCC----TTCCC--CCCCEEECTTSCEEEEC
T ss_pred EEEEEEeCCCCcC-ceEEEEEeCCCC----CCCCc--CCceEEECCCCCEEEEE
Confidence 7888887643211 000111111000 00112 23579999999876664
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.33 E-value=0.73 Score=43.47 Aligned_cols=204 Identities=7% Similarity=0.025 Sum_probs=114.8
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
.+..|+|.+. ++..+.+-..++.|..+++.......+...... .+..+++.+.+..|
T Consensus 38 ~~~~l~~d~~-~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~---------------~P~GlAvD~~~~~L------- 94 (628)
T 4a0p_A 38 EASALDFDVT-DNRIYWTDISLKTISRAFMNGSALEHVVEFGLD---------------YPEGMAVDWLGKNL------- 94 (628)
T ss_dssp CEEEEEEETT-TTEEEEEETTTTEEEEEETTSCSCEEEECSSCS---------------CCCEEEEETTTTEE-------
T ss_pred ceEEEEEECC-CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC---------------CcceEEEEeCCCEE-------
Confidence 4778999653 234444555788999998876654444332111 11246666555544
Q ss_pred cCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe---cCCeEEEEeCCCCCceeeE
Q 015363 194 SNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA---DDLRINLWNLEISNQSFNI 270 (408)
Q Consensus 194 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~---~d~~i~iwd~~~~~~~~~~ 270 (408)
+++-...+.|.+.+ +... ..+.+....-...+.|+++|....|..+ ..+.|...+++ +.....+
T Consensus 95 ----Y~tD~~~~~I~v~~-~dG~-------~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d-G~~~~~l 161 (628)
T 4a0p_A 95 ----YWADTGTNRIEVSK-LDGQ-------HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD-GSERTTL 161 (628)
T ss_dssp ----EEEETTTTEEEEEE-TTST-------TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEE
T ss_pred ----EEEECCCCEEEEEe-cCCC-------cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC-CCceEEE
Confidence 24444456666655 2221 1112212233457899999965555554 26788888887 3332222
Q ss_pred eecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEc
Q 015363 271 VDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFA 350 (408)
Q Consensus 271 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 350 (408)
+ . .-.....|++++++.+++.+=...+.|..+|+..... +.+... ......+++.
T Consensus 162 ~-------~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-----~v~~~~------------l~~P~glav~ 216 (628)
T 4a0p_A 162 V-------P-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-----EVIADD------------LPHPFGLTQY 216 (628)
T ss_dssp E-------C-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEEEC------------CSCEEEEEEE
T ss_pred E-------C-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-----EEeecc------------CCCceEEEEE
Confidence 1 1 2345789999998735555555678999999876432 122111 1234567776
Q ss_pred cCCCEEEEeC-CCeEEEEECCCCCCceeeee
Q 015363 351 RNGRHILSRD-YMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 351 pdg~~l~s~~-d~~v~~wd~~~~~~~~~~~~ 380 (408)
. +.+.++-. .+.|...|..+ ++....+.
T Consensus 217 ~-~~ly~tD~~~~~I~~~dk~t-g~~~~~l~ 245 (628)
T 4a0p_A 217 Q-DYIYWTDWSRRSIERANKTS-GQNRTIIQ 245 (628)
T ss_dssp T-TEEEEEETTTTEEEEEETTT-CCSCEEEE
T ss_pred C-CEEEEecCCCCEEEEEECCC-CCceEEEe
Confidence 4 33334443 48999998766 45444443
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.29 E-value=0.76 Score=43.25 Aligned_cols=202 Identities=13% Similarity=0.042 Sum_probs=106.2
Q ss_pred ccceEEEEECCCCCeEEEee-cCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCccccccccccccc
Q 015363 35 VDIISAIEFDKSGDHLATGD-RGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEE 113 (408)
Q Consensus 35 ~~~V~~~~~s~~~~~l~sg~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~ 113 (408)
...+..|+|++.+..|+.+. ..+.|..+++++.... ...+.... .
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~----------------------~~v~~~~~------------~ 84 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV----------------------QNVVVSGL------------L 84 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C----------------------EEEECSSC------------S
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce----------------------EEEEeCCC------------C
Confidence 44577899998766555544 4577888887654210 01111111 3
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccc
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCA 193 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (408)
....+++.+. ++.++.+-...+.|.+.++............. ..+..+++.|.+..+
T Consensus 85 ~P~GlAvD~~-~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l---------------~~P~~Iavdp~~g~l------- 141 (619)
T 3s94_A 85 SPDGLACDWL-GEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL---------------DQPRAIALDPSSGFM------- 141 (619)
T ss_dssp CEEEEEEETT-TTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------------SCCCCEEEETTTTEE-------
T ss_pred CcCeEEEEec-CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCC---------------CCCceEEEecCCCeE-------
Confidence 3677888432 34455555677899999998765444332211 112257777765554
Q ss_pred cCccccCCC--CCceeeeceeeeccccccccccceeeccccccceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceee
Q 015363 194 SNDSSFPPG--GVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDGETFISA--DDLRINLWNLEISNQSFN 269 (408)
Q Consensus 194 ~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~ 269 (408)
+... ..+.|...+ + ++ .....+....-...+.|++++++..|..+ ..+.|..+|++ +.....
T Consensus 142 -----y~tD~g~~~~I~r~~-~---dG----~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d-G~~~~~ 207 (619)
T 3s94_A 142 -----YWTDWGEVPKIERAG-M---DG----SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQA 207 (619)
T ss_dssp -----EEEECSSSCEEEEEE-T---TS----CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS-CCEEC-
T ss_pred -----EEeccCCCCEEEEEE-C---CC----CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC-CCccEE
Confidence 2222 123343322 1 11 11111112223567899999987777766 57889999887 333222
Q ss_pred EeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCc
Q 015363 270 IVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSA 316 (408)
Q Consensus 270 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 316 (408)
+. .+.......|++..+ .++.+-...+.|...|..+++
T Consensus 208 ~~-------~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 208 VV-------KGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp ---------------CCCEEESSS--EEEEECTTTCSEEEEESSSCC
T ss_pred EE-------eCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCc
Confidence 21 111112245666544 455555556788888877664
No 307
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.28 E-value=0.73 Score=42.94 Aligned_cols=29 Identities=3% Similarity=0.016 Sum_probs=24.1
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEecc
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFDW 154 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 154 (408)
+..+++++.|+.+..+|..+++.......
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 143 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEV 143 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecC
Confidence 34788888999999999999988776654
No 308
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.22 E-value=0.5 Score=40.50 Aligned_cols=209 Identities=9% Similarity=0.117 Sum_probs=109.5
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEcc----CCCeeecccccccCcc-ccC
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMA----NGGCGERNFGCASNDS-SFP 200 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~-~~~ 200 (408)
.++++....++-+.+||+ +++.+..+... .+. .+..-| .|+.+ ++ +++
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g----------~~n-------nVD~r~~~~l~g~~~---------dla~as 92 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNTG----------KLN-------NVDIRYDFPLNGKKV---------DIAAAS 92 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECCS----------CEE-------EEEEEEEEEETTEEE---------EEEEEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccCC----------Ccc-------cEEEecccccCCceE---------eEEEEe
Confidence 457777778889999999 66666655321 111 122222 22211 11 233
Q ss_pred CCC--Cceeeeceeeeccc--cccccccceeeccccccceEEEEe--CCC-CC-EEEEe-cCCeEEEEeCCCC--C-cee
Q 015363 201 PGG--VSSLRLPVVVTSQE--TNLVAGCRRIYAHAHDYHINSISN--NSD-GE-TFISA-DDLRINLWNLEIS--N-QSF 268 (408)
Q Consensus 201 ~~~--~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~--~~~-~~-~l~~~-~d~~i~iwd~~~~--~-~~~ 268 (408)
... ++.|.+|+ +.... ........... ......+..+++ +|. +. ++++. .+|.+..|++... + ...
T Consensus 93 ~R~~~~n~l~vf~-iDp~~~~l~~i~~~~~pv-~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~ 170 (355)
T 3amr_A 93 NRSEGKNTIEIYA-IDGKNGTLQSMTDPDHPI-ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISG 170 (355)
T ss_dssp ECSTTCCEEEEEE-ECTTTCCEEECSCTTSCE-ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEE
T ss_pred CCCCCCCeEEEEE-ECCCCCceeeccccccCc-CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccc
Confidence 334 57888887 42211 11111100000 011144566777 775 44 34445 7899999988421 1 111
Q ss_pred eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee-cccccccc-cccCCCCccccccccceeEE
Q 015363 269 NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC-DTHSKLFE-EQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 269 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~h~~~i~~ 346 (408)
+.+. ++. ..+.+-.+...+.. ..|+.+-++.-|..++.+..... .+.+..+. ++ ....+..
T Consensus 171 ~lVR----~f~-lgsq~EgcvvDd~~-g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~-----------l~aDvEG 233 (355)
T 3amr_A 171 KKVR----AFK-MNSQTEGMAADDEY-GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRH-----------LTRDIEG 233 (355)
T ss_dssp EEEE----EEE-CSSCEEEEEEETTT-TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSS-----------BCSCEEE
T ss_pred eEEE----Eec-CCCCcceEEEcCCC-CeEEEecccceEEEEeCCcCCCCCceEEEEecCCc-----------cccCcce
Confidence 1111 122 13467888999887 78888888876777775522100 00011111 11 1235777
Q ss_pred EEE--ccCCC-EEEEe--CCCeEEEEECCCCCCceeeee
Q 015363 347 IKF--ARNGR-HILSR--DYMTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 347 ~~~--spdg~-~l~s~--~d~~v~~wd~~~~~~~~~~~~ 380 (408)
|++ .++++ +|+++ .++++.+||.....+.+..|.
T Consensus 234 Lai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 234 LTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 877 45555 55554 358999999973356777775
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.98 E-value=0.26 Score=42.72 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=62.6
Q ss_pred cceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCC---CCceEEEEeC---C---
Q 015363 234 YHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPT---HCNMLAYSSS---K--- 304 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~---d--- 304 (408)
.....++|.|+|+++++-.++.|+++|.. + . ..+..+. ...........|+++|+ +..++++-+. +
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~-G-~-~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISPS-G-K-KLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECSS-C-E-EEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeCC-C-c-eEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 45678999999987777666999999743 3 2 2221111 11222355789999997 3155555442 3
Q ss_pred -CeEEEEEcCCCc-eecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe
Q 015363 305 -GSIRLIDMRQSA-LCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR 359 (408)
Q Consensus 305 -g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~ 359 (408)
..|..|+..... ........+..... -..| ....++|.|||.+.++-
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~------~~~h--~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPG------AYIH--NGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEEC------CSSC--CCCCEEECTTSCEEEEC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCC------CCCc--CCceEEECCCCcEEEEE
Confidence 577778776441 00000001111000 0112 24678999999877764
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.93 E-value=0.33 Score=42.69 Aligned_cols=118 Identities=12% Similarity=0.135 Sum_probs=74.0
Q ss_pred EeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcccC--CcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCce
Q 015363 240 SNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMED--LTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSAL 317 (408)
Q Consensus 240 ~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 317 (408)
....++.-++.+.++.||.-++.. +..++.+.. +. ....+..+..+|+| .+||..+ +..|.|-.+..+..
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~~-~~~Yk~L~~-----~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~ 98 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVLT-DSLYHSLNF-----SRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYS 98 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETTT-CSSCEEEEC-----TTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCS
T ss_pred EEEcCCCEEEEEECCEEEEEECCC-CCcceEEec-----CcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCccc
Confidence 345677788888779999988873 334554432 21 12246789999999 8888775 66899988884421
Q ss_pred ecc------ccc--ccccccCCCCccccccccceeEEEEEccC---CCEEEEe-CCCeEEEEECCC
Q 015363 318 CDT------HSK--LFEEQEAPGTRSFFTEIIASISDIKFARN---GRHILSR-DYMTLKLWDINM 371 (408)
Q Consensus 318 ~~~------~~~--~~~~~~~~~~~~~~~~h~~~i~~~~~spd---g~~l~s~-~d~~v~~wd~~~ 371 (408)
... +++ .+.-... -.....+|..+.|+|- +..|++- +|+.|++||+..
T Consensus 99 ~~~~~~~~~~~q~~ty~l~~~------~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 99 NVEDVSIQDAFQIFHYSIDEE------EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCCHHHHHTTEEEEEEGGGC------C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cCcccccccccceeEEEcCCc------ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 100 001 1111100 0002367999999993 4456654 789999999985
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.52 E-value=0.69 Score=36.65 Aligned_cols=65 Identities=9% Similarity=0.017 Sum_probs=36.3
Q ss_pred cceEEEEeCCCCCEEEEecCCeEEEEeCCCCCce-----eeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEE
Q 015363 234 YHINSISNNSDGETFISADDLRINLWNLEISNQS-----FNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIR 308 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 308 (408)
..+..|.+.|+|.+.+.. |+.+.-......... ...+ -...-...+.+.|.|++ .++++. ++.+.
T Consensus 135 ~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~------g~~g~~~yr~l~f~~~G-~l~~v~--~g~~Y 204 (236)
T 1tl2_A 135 SGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKI------GQGGWDTFKFLFFSSVG-TLFGVQ--GGKFY 204 (236)
T ss_dssp GGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEE------ESSSGGGEEEEEECTTS-CEEEEE--TTEEE
T ss_pred CceEEEEECCCceEEEEe-CCcEEecCCCCCCCccccccccee------ccCCcceEEEEEECCCC-cEEEEe--CCeEE
Confidence 457889999999999888 777543222211100 0000 11222334567799998 666554 77443
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.37 E-value=0.86 Score=39.46 Aligned_cols=79 Identities=11% Similarity=0.097 Sum_probs=45.7
Q ss_pred cceEEEEeCCCCC-EEEEecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCC---CCceEEEEeC------
Q 015363 234 YHINSISNNSDGE-TFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPT---HCNMLAYSSS------ 303 (408)
Q Consensus 234 ~~v~~i~~~~~~~-~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~------ 303 (408)
.....|+|.|+|+ ++++-..+.|++++.. +.....+..+ +............|+++|+ +..++++-+.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~-~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGV-PDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSC-CCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCC-cccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4567899999999 7766677999999854 2211111111 0011122345789999995 3155555433
Q ss_pred -CCeEEEEEcCC
Q 015363 304 -KGSIRLIDMRQ 314 (408)
Q Consensus 304 -dg~i~iwd~~~ 314 (408)
...|..|++..
T Consensus 96 ~~~~v~r~~~~~ 107 (353)
T 2g8s_A 96 AGTAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEEEECT
T ss_pred ceeEEEEEEECC
Confidence 23566676653
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.89 E-value=0.76 Score=41.37 Aligned_cols=117 Identities=11% Similarity=0.098 Sum_probs=63.4
Q ss_pred cceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcc--cCCcCCeEEEEEcCC---CCceEEEEeC----
Q 015363 234 YHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPANM--EDLTEVITSAEFHPT---HCNMLAYSSS---- 303 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~---~~~~l~s~~~---- 303 (408)
.....++|.|+|+++++- ..+.|++++... +....+..+.. .+ ......+..|+|+|+ +..+.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~-g~~~~~~~~~~-~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPES-GSVKTVFQVPE-IVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEECTT-CCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCC-CcEeEEecCCc-cccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 456799999999988887 445788887652 22222222211 11 113456789999995 3155554432
Q ss_pred --------CCeEEEEEcCCCc-eecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeC
Q 015363 304 --------KGSIRLIDMRQSA-LCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRD 360 (408)
Q Consensus 304 --------dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~ 360 (408)
...|..++..... .+......+..... -..| ....|+|.|||.+.++..
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~------~~~H--~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS------SKDH--QSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC------CSSC--CEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC------CCCC--CCCeEeECCCCeEEEEEC
Confidence 2356666654321 11000011111100 0112 468899999998777643
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.87 E-value=0.2 Score=39.73 Aligned_cols=115 Identities=12% Similarity=0.031 Sum_probs=64.1
Q ss_pred ceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcc--cCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEc
Q 015363 235 HINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANM--EDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDM 312 (408)
Q Consensus 235 ~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 312 (408)
.+..++|+|+|.+.++ .+|.+.-.+..+.... .-+.. ...+ .+-.. ...+.|.|+| .+.++ .||.|+-++-
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~-~W~~s-~t~IG~~Gw~~-F~a~~fD~~G-~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDND-NWMGR-AKKIGNGGWNQ-FQFLFFDPNG-YLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTC-CHHHH-CEEEECSCGGG-CSEEEECTTS-CEEEE--ETTEEEEESC
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcc-ccccc-ccEeccccccc-ceEEEECCCC-CEEEe--CCCEEEEeCC
Confidence 5679999999998777 7787666665421110 00000 0000 01111 3678999999 66666 5799988875
Q ss_pred CCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEE
Q 015363 313 RQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKL 366 (408)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~ 366 (408)
.+... ..+.... ..+-.+--..+..|.|.|+|.+-+.. |+.++-
T Consensus 115 P~~~~-----~~Wl~~a----~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr 158 (236)
T 1tl2_A 115 PQSDT-----DNWIARA----TEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK 158 (236)
T ss_dssp CCSTT-----CCHHHHS----EEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred CcCCC-----Cceeccc----cEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence 33211 1110000 00000001357999999999988888 877543
No 315
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.82 E-value=1.7 Score=37.31 Aligned_cols=115 Identities=13% Similarity=0.121 Sum_probs=64.8
Q ss_pred cceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCC----CCceEEEEe--CCCe
Q 015363 234 YHINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPT----HCNMLAYSS--SKGS 306 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~~l~s~~--~dg~ 306 (408)
.....|+|.|+|+++++- ..|.|++++.... ....+..+ +............|+++|+ + .++++-+ .+..
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g-~~~~v~~~-~~v~~~g~~GllGia~~Pdf~~~g-~lYv~yt~~~~~~ 108 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTG-RKTELGEV-PGVSPSGEGGLLGIALSPDYASDH-MVYAYFTSASDNR 108 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTC-CEEEEEEC-TTCCCBTTBSEEEEEECTTHHHHC-EEEEEEECSSSEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCC-cEeeeccc-CceeecCCCCceeeEeccccccCC-EEEEEEecCCCCE
Confidence 457799999999988888 5999999986532 22222111 1112233566889999995 4 4444322 3556
Q ss_pred EEEEEcCCCc----eecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe
Q 015363 307 IRLIDMRQSA----LCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR 359 (408)
Q Consensus 307 i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~ 359 (408)
|.-|.+..+. ........+..... -..| .-..|.|.|||.+.++.
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~------~~~H--~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPK------GVIH--NGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECC------CSSC--CCCCEEECTTSCEEEEC
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCC------CCCc--cCccccCCCCCCEEEEE
Confidence 6667665421 11000011111100 0122 24578999999877763
No 316
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.76 E-value=1.8 Score=38.95 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=62.1
Q ss_pred cceEEEEeCCCCC--EEEEecCCeEEEEeCCCCCceeeEeecCCCccc----CCcCCeEEEEEcCC----CCceEEEEeC
Q 015363 234 YHINSISNNSDGE--TFISADDLRINLWNLEISNQSFNIVDVKPANME----DLTEVITSAEFHPT----HCNMLAYSSS 303 (408)
Q Consensus 234 ~~v~~i~~~~~~~--~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~p~----~~~~l~s~~~ 303 (408)
.....|+|.|++. +|++-..|.|++++.........+..+...... .....+..|+|+|+ + .++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~-~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG-KLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC-EEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC-EEEEEEeC
Confidence 4467899999985 666668899999976422111111122111111 12456889999997 4 44444332
Q ss_pred C------------CeEEEEEcCCC--ceec--ccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCC
Q 015363 304 K------------GSIRLIDMRQS--ALCD--THSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDY 361 (408)
Q Consensus 304 d------------g~i~iwd~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d 361 (408)
+ ..|.-|.+..+ ...+ .....+.... ....| .-..|+|.|||.+.++..|
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~------~~~~H--~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE------LHRKH--LGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE------SSSSS--CEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC------CCCcc--cCCcEeECCCCcEEEEeCC
Confidence 1 14555665432 1100 0001111110 01234 3578999999987776544
No 317
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.48 E-value=5 Score=37.54 Aligned_cols=78 Identities=12% Similarity=0.190 Sum_probs=45.0
Q ss_pred EEeCCCCCEEEEe-cC----------------CeEEEEeCCCCCceeeEeecCCCc---ccCCcCCeEEEEEc-CCCC--
Q 015363 239 ISNNSDGETFISA-DD----------------LRINLWNLEISNQSFNIVDVKPAN---MEDLTEVITSAEFH-PTHC-- 295 (408)
Q Consensus 239 i~~~~~~~~l~~~-~d----------------~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~-p~~~-- 295 (408)
+++.+...++..+ .+ +.|..+|.++++..... +..+.. +.....++. +... .+|.
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~-q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY-QKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE-ESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe-ecCCCccccccCCCccEE-EeccccCCcEE
Confidence 4555666677666 43 47889999866554432 211100 001112221 2222 4552
Q ss_pred ceEEEEeCCCeEEEEEcCCCcee
Q 015363 296 NMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 296 ~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
.+++.++.+|.+.++|.++++.+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEEECCCcEEEEEECCCCCEe
Confidence 35777889999999999999765
No 318
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.25 E-value=3.3 Score=34.81 Aligned_cols=106 Identities=10% Similarity=0.097 Sum_probs=58.9
Q ss_pred EEeCCCCCEEEEe--cCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC--CeEEEEEcCC
Q 015363 239 ISNNSDGETFISA--DDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK--GSIRLIDMRQ 314 (408)
Q Consensus 239 i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--g~i~iwd~~~ 314 (408)
.+++++++.|.-. ....|...++. +.....+ +. +... ..+.|++ .+|+-...+ ..|..-++..
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~-g~~~~~l-------~~---~~~~-~~~~P~g-~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTA-SQSEALF-------YD---CNCY-KPVVLDD-TNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETT-TTEEEEE-------EC---SCEE-EEEEEET-TEEEEEEGGGTTEEEEECSSS
T ss_pred eEeeEECCEEEEEeCCCceEEEEECC-CCCEEEE-------eC---CCcc-ceeeecC-CEEEEEEcCCCcEEEEEECCC
Confidence 4567888888765 36778888877 3333222 11 1122 3456888 666655443 3566666665
Q ss_pred CceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCC---CeEEEEECCCCCCceeeee
Q 015363 315 SALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDY---MTLKLWDINMDSGPVATFQ 380 (408)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d---~~v~~wd~~~~~~~~~~~~ 380 (408)
... ..+... .+ ..|+|++.+|+-+++ ..|..-++ +|...+.+.
T Consensus 217 ~~~-----~~Lt~~--------------~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~--DG~~r~~l~ 262 (302)
T 3s25_A 217 PNP-----VVLTEA--------------NI--EHYNVYGSLIFYQRGGDNPALCVVKN--DGTGFKELA 262 (302)
T ss_dssp CCC-----EECSCS--------------CE--EEEEEETTEEEEEECSSSCEEEEEET--TSCCCEEEE
T ss_pred CCe-----EEEeCC--------------Cc--ceEEECCCEEEEEECCCCcEEEEEEC--CCCccEEee
Confidence 532 222211 23 348889999886632 45555555 455545544
No 319
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.51 E-value=4.4 Score=34.37 Aligned_cols=227 Identities=8% Similarity=0.125 Sum_probs=123.1
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCc
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVS 205 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (408)
...+|.-. ..++.++|+++++..........- ++ =.|..+.. | .--.+.
T Consensus 78 ~~ViALra-g~~LQiFnletK~klks~~~~e~V--------vf--------WkWis~~~-L-------------~lVT~t 126 (365)
T 2xzh_A 78 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDV--------TF--------WKWISLNT-V-------------ALVTDN 126 (365)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEEECSSCE--------EE--------EEECSSSE-E-------------EEEESS
T ss_pred ccEEEEec-CCeEEEechHHhhhhcceecCCcc--------EE--------EEecCCCe-E-------------EEEcCC
Confidence 34555544 688999999999888888877532 11 11222221 1 112345
Q ss_pred eeeeceeeeccccccccccceeecccc----ccceEEEEeCCCCCEEEE-e---c----CCeEEEEeCCCCCceeeEeec
Q 015363 206 SLRLPVVVTSQETNLVAGCRRIYAHAH----DYHINSISNNSDGETFIS-A---D----DLRINLWNLEISNQSFNIVDV 273 (408)
Q Consensus 206 ~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~l~~-~---~----d~~i~iwd~~~~~~~~~~~~~ 273 (408)
.|..|+ +.+ ...+.+.+ ..| ...|.....+++.++++. | . .|.+.+|..+ .+ ..+.
T Consensus 127 aVyHWs-~~~-----~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~-~sQ~--- 194 (365)
T 2xzh_A 127 AVYHWS-MEG-----ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RK-VSQP--- 194 (365)
T ss_dssp EEEEEE-SST-----TCCCEEEE-ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-TT-EEEE---
T ss_pred cEEEEc-ccC-----CCCCceee-ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec-cc-ccce---
Confidence 667777 432 11222222 111 356777888999998774 3 2 3677899988 22 3332
Q ss_pred CCCcccCCcCCeEEEEEc--CCCCceEEEEeCC---CeEEEEEcCCCceecccc--cccccccCCCCccccccccceeEE
Q 015363 274 KPANMEDLTEVITSAEFH--PTHCNMLAYSSSK---GSIRLIDMRQSALCDTHS--KLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 274 ~~~~~~~~~~~v~~~~~~--p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
+++|......+.+. +....+|+.+... ++++|-++.....-..+. +...-..++ ..-.+-..+
T Consensus 195 ----ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fpp------ea~~DFPVa 264 (365)
T 2xzh_A 195 ----IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP------EAQNDFPVA 264 (365)
T ss_dssp ----ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCT------TCTTCCEEE
T ss_pred ----eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCc------cccCCceEE
Confidence 56776544333332 1111355554432 588998885431000000 000000000 111244567
Q ss_pred EEEccCCCEEEEe-CCCeEEEEECCCCCCceeeeeecccccceEEe-cCCCeeeeeeceeee
Q 015363 347 IKFARNGRHILSR-DYMTLKLWDINMDSGPVATFQVHEHLRPKVMH-SSKNYFMGLDNIHTL 406 (408)
Q Consensus 347 ~~~spdg~~l~s~-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~ 406 (408)
+..|+.-..++.- ..|.|.+||+.+ +.++..-+--.+.....+. ...+.++++.|.+.+
T Consensus 265 mqvs~kygviyviTK~G~ihlyDleT-gt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 265 MQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EEecccCCEEEEEeCCcEEEEEEccc-CcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 8888766666655 469999999998 7887776665555444332 234567777776554
No 320
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.99 E-value=13 Score=38.55 Aligned_cols=227 Identities=9% Similarity=0.138 Sum_probs=117.4
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCc
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVS 205 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (408)
...+|.- ...++.|+|+++.........+..- ..| -|.+++.-- --.+.
T Consensus 77 ~~iiALr-ag~~lQiFnl~~k~klks~~~~e~V-------vfW--------kWis~~~l~---------------lVT~~ 125 (1630)
T 1xi4_A 77 SKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDV-------TFW--------KWISLNTVA---------------LVTDN 125 (1630)
T ss_pred cceEEEe-cCCeEEEeehHHhhhhcccccCCCc-------eEE--------EecCCCeeE---------------EEcCC
Confidence 3344443 3789999999988776665554321 011 122232221 13456
Q ss_pred eeeeceeeeccccccccccceeecccc----ccceEEEEeCCCCCEEEE-e-------cCCeEEEEeCCCCCceeeEeec
Q 015363 206 SLRLPVVVTSQETNLVAGCRRIYAHAH----DYHINSISNNSDGETFIS-A-------DDLRINLWNLEISNQSFNIVDV 273 (408)
Q Consensus 206 ~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~l~~-~-------~d~~i~iwd~~~~~~~~~~~~~ 273 (408)
.|..|+ +.+ ...+.+.+ ..| ...|..-..+++.++++. | -.|.+.+|+.+... .+
T Consensus 126 aVyHW~-~~~-----~s~P~k~f-dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ---- 192 (1630)
T 1xi4_A 126 AVYHWS-MEG-----ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQ---- 192 (1630)
T ss_pred eEEEec-cCC-----CCccHHHH-hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc--ch----
Confidence 788888 533 11222222 222 356777788899988774 3 24778888887322 22
Q ss_pred CCCcccCCcCCeEEEEEc--CCCCceEEEEeC---CCeEEEEEcCCCceecccccccccccCCCCccccc--cccceeEE
Q 015363 274 KPANMEDLTEVITSAEFH--PTHCNMLAYSSS---KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFT--EIIASISD 346 (408)
Q Consensus 274 ~~~~~~~~~~~v~~~~~~--p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~i~~ 346 (408)
.+.+|......+... +....+++.+.. .+.++|-++.....- . ..+.... ...+|. ....-..+
T Consensus 193 ---~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~-~--~~f~kk~---~~~~~~~~~~~Dfpv~ 263 (1630)
T 1xi4_A 193 ---PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG-N--QPFPKKA---VDVFFPPEAQNDFPVA 263 (1630)
T ss_pred ---hhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccC-C--CCCcccc---ccccCCcccccCcceE
Confidence 256666554444432 222234444433 268999888543000 0 0110000 000010 11233456
Q ss_pred EEEccCCCEEEEe-CCCeEEEEECCCCCCceeeeeecccccceEEe-cCCCeeeeeeceeee
Q 015363 347 IKFARNGRHILSR-DYMTLKLWDINMDSGPVATFQVHEHLRPKVMH-SSKNYFMGLDNIHTL 406 (408)
Q Consensus 347 ~~~spdg~~l~s~-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~ 406 (408)
+..|+.-..+..- ..|.|.++|+.+ +.++..-+-........+. ...+.++++.|.+.+
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t-~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~v 324 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEeccc-chhhhhccccCCceEEeccCCCCCceEEEcCCceE
Confidence 7778765555554 459999999998 6776655544443333332 123446666655443
No 321
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.83 E-value=4.8 Score=33.82 Aligned_cols=63 Identities=8% Similarity=0.111 Sum_probs=35.3
Q ss_pred EeCCCCCEEEEec---C--CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeC-CCeEEEEEcC
Q 015363 240 SNNSDGETFISAD---D--LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSS-KGSIRLIDMR 313 (408)
Q Consensus 240 ~~~~~~~~l~~~~---d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~ 313 (408)
.|+++++.|+-.. + ..|...++. +.....+ ..+.. .+++|++ +.|+-.+. ...|..-++.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~l--------t~~~~----~~~~~~g-~~iy~t~~g~~~Iy~~~l~ 175 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKI--------KNHYL----FTCNTSD-RYFYYNNPKNGQLYRYDTA 175 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEE--------ESSCC----CCSEEET-TEEEEECTTTCCEEEEETT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEE--------eCCCc----eEeeEEC-CEEEEEeCCCceEEEEECC
Confidence 5677888777542 3 345555555 2222222 22221 4577888 55555444 6788888877
Q ss_pred CCc
Q 015363 314 QSA 316 (408)
Q Consensus 314 ~~~ 316 (408)
.+.
T Consensus 176 g~~ 178 (302)
T 3s25_A 176 SQS 178 (302)
T ss_dssp TTE
T ss_pred CCC
Confidence 654
No 322
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.94 E-value=2.3 Score=38.94 Aligned_cols=79 Identities=16% Similarity=0.166 Sum_probs=52.7
Q ss_pred ceEEEEeCCCCCEEEEe--cCCeEEEEeCCCCCceee--EeecC---CCcccCCcCCeEEEEEcCCCCceEEEEeCCCeE
Q 015363 235 HINSISNNSDGETFISA--DDLRINLWNLEISNQSFN--IVDVK---PANMEDLTEVITSAEFHPTHCNMLAYSSSKGSI 307 (408)
Q Consensus 235 ~v~~i~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~--~~~~~---~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 307 (408)
....+.++|||++++.+ -+.++.++|++.-...+. +++.+ ..... -.......+|.++| ....+---|..|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCC-ceEeeeeecceE
Confidence 34568899999999886 699999999984211100 00000 00111 23446789999999 777777789999
Q ss_pred EEEEcCCC
Q 015363 308 RLIDMRQS 315 (408)
Q Consensus 308 ~iwd~~~~ 315 (408)
.-|++...
T Consensus 402 vkWni~~a 409 (638)
T 3sbq_A 402 VKWNMEEA 409 (638)
T ss_dssp EEEEHHHH
T ss_pred EEEeccHH
Confidence 99998753
No 323
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.77 E-value=6.7 Score=33.29 Aligned_cols=103 Identities=13% Similarity=0.242 Sum_probs=71.2
Q ss_pred CCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCceecccccccccccCCC
Q 015363 253 DLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPG 332 (408)
Q Consensus 253 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 332 (408)
+..|.+.|+.......+. + +.. -+.-.+|.. +.+|.-. ...+.++|+.+...+ +.+...
T Consensus 48 ~~~VvIiDl~n~~~~~Rr-p-----i~A-----dsAIMnP~~-~ViALra-g~~LQiFnletK~kl----ks~~~~---- 106 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRR-P-----ISA-----DSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKM----KAHTMT---- 106 (365)
T ss_dssp EEEEEEEETTSTTSCEEE-E-----CCC-----SEEEECSSS-SEEEEEE-TTEEEEEETTTTEEE----EEEECS----
T ss_pred CCEEEEEECCCCCCcccc-c-----ccc-----ceeeeCCCc-cEEEEec-CCeEEEechHHhhhh----cceecC----
Confidence 347888888865544321 1 111 245668998 7777665 789999999998554 444433
Q ss_pred CccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCCCCCceeeeeeccccc
Q 015363 333 TRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINMDSGPVATFQVHEHLR 386 (408)
Q Consensus 333 ~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~~~~~~~~~~~~~~~~ 386 (408)
..|.-=.|-. .+.|+--.+..|+-|++..+..+.+.+..|..+.
T Consensus 107 ---------e~VvfWkWis-~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~ 150 (365)
T 2xzh_A 107 ---------DDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA 150 (365)
T ss_dssp ---------SCEEEEEECS-SSEEEEEESSEEEEEESSTTCCCEEEEECCGGGT
T ss_pred ---------CccEEEEecC-CCeEEEEcCCcEEEEcccCCCCCceeeecchhcc
Confidence 3566667764 4566666667999999986678999999998873
No 324
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.47 E-value=11 Score=33.68 Aligned_cols=36 Identities=22% Similarity=0.372 Sum_probs=23.0
Q ss_pred ceeEEEEeecCCCcEEEEEeCC-CeEEEEEcCCCcEEEEe
Q 015363 114 KINKIRWCQSANSALYLLSTND-KTIKLWKVQEKKVKKVF 152 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d-~~i~vwd~~~~~~~~~~ 152 (408)
....|+|. ++|.++++ ... +.|++++..+++...+.
T Consensus 28 ~P~~~a~~--pdG~l~V~-e~~gg~I~~~~~~~g~~~~~~ 64 (454)
T 1cru_A 28 KPHALLWG--PDNQIWLT-ERATGKILRVNPESGSVKTVF 64 (454)
T ss_dssp SEEEEEEC--TTSCEEEE-ETTTCEEEEECTTTCCEEEEE
T ss_pred CceEEEEc--CCCcEEEE-EcCCCEEEEEECCCCcEeEEe
Confidence 46799995 45865555 555 47888876656544433
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.60 E-value=13 Score=33.08 Aligned_cols=227 Identities=9% Similarity=0.112 Sum_probs=126.6
Q ss_pred CcEEEEEeCCCeEEEEEcCCCcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCccccCCCCCc
Q 015363 126 SALYLLSTNDKTIKLWKVQEKKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSFPPGGVS 205 (408)
Q Consensus 126 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 205 (408)
...+|.-. ..++.++|+++............- ..| -|.+++.--+ -.+.
T Consensus 77 ~~iiALra-g~~lQiFnle~K~klks~~~~e~V-------vfW--------kWis~~~l~l---------------VT~t 125 (494)
T 1bpo_A 77 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDV-------TFW--------KWISLNTVAL---------------VTDN 125 (494)
T ss_dssp SSCEEEEE-TTEEEEEETTTTEEEEEEECSSCC-------CEE--------EEEETTEEEE---------------ECSS
T ss_pred CcEEEEec-CCeEEEEchHHhhhhcceecCCCc-------eEE--------EecCCCeEEE---------------EcCC
Confidence 34555544 789999999999888877765432 111 1223322211 2456
Q ss_pred eeeeceeeeccccccccccceeecccc----ccceEEEEeCCCCCEEEE-e---c----CCeEEEEeCCCCCceeeEeec
Q 015363 206 SLRLPVVVTSQETNLVAGCRRIYAHAH----DYHINSISNNSDGETFIS-A---D----DLRINLWNLEISNQSFNIVDV 273 (408)
Q Consensus 206 ~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~l~~-~---~----d~~i~iwd~~~~~~~~~~~~~ 273 (408)
.|..|+ +.+ ...+.+.+ ..| ...|.....+++.++++. | . .|.+.+|+.+. + ..+.
T Consensus 126 aVyHWs-i~~-----~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~-~sQ~--- 193 (494)
T 1bpo_A 126 AVYHWS-MEG-----ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-K-VSQP--- 193 (494)
T ss_dssp EEEEEE-SSS-----SCCCEEEE-ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-C-CEEE---
T ss_pred eeEEec-ccC-----CCCchhhe-ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-c-ccch---
Confidence 777787 433 11232332 221 356778888999998874 3 2 36778999883 2 2222
Q ss_pred CCCcccCCcCCeEEEEEcCC--CCceEEEEeCC---CeEEEEEcCCCceecccc--cccccccCCCCccccccccceeEE
Q 015363 274 KPANMEDLTEVITSAEFHPT--HCNMLAYSSSK---GSIRLIDMRQSALCDTHS--KLFEEQEAPGTRSFFTEIIASISD 346 (408)
Q Consensus 274 ~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~h~~~i~~ 346 (408)
+++|......+...-+ ...+|+.+... +.++|-++.....-..+. +...-..++ .....-..+
T Consensus 194 ----ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fpp------e~~~DFPva 263 (494)
T 1bpo_A 194 ----IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP------EAQNDFPVA 263 (494)
T ss_dssp ----ECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCT------TSTTCCEEE
T ss_pred ----heeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCc------ccccCceeE
Confidence 5777665544444321 11355555543 789999985431000000 000000000 111244567
Q ss_pred EEEccCCCEEEEe-CCCeEEEEECCCCCCceeeeeecccccceEEe-cCCCeeeeeeceeee
Q 015363 347 IKFARNGRHILSR-DYMTLKLWDINMDSGPVATFQVHEHLRPKVMH-SSKNYFMGLDNIHTL 406 (408)
Q Consensus 347 ~~~spdg~~l~s~-~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~ 406 (408)
+..|+.-..++.- ..|.|.+||+.+ +.++..-+-........+. ...+.++++.|.+.+
T Consensus 264 mqvs~kygviyviTK~G~i~lyDleT-gt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 264 MQISEKHDVVFLITKYGYIHLYDLET-GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred EEecccCCEEEEEecCceEEEEeccc-ceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence 8888876666655 469999999998 7887776665555444332 334557777766554
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.71 E-value=11 Score=31.35 Aligned_cols=27 Identities=4% Similarity=0.092 Sum_probs=19.9
Q ss_pred CcEEEEEeCC------CeEEEEEcCCCcEEEEe
Q 015363 126 SALYLLSTND------KTIKLWKVQEKKVKKVF 152 (408)
Q Consensus 126 ~~~l~~~~~d------~~i~vwd~~~~~~~~~~ 152 (408)
+.+++.|+.+ ..+.+||..+.+.....
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 5677777755 46889999988776653
No 327
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=87.37 E-value=9.1 Score=33.26 Aligned_cols=111 Identities=13% Similarity=0.112 Sum_probs=61.1
Q ss_pred eEEEEeCCCCC-ceeeEeecCCCcccCCcCCeEEEEEc---CC---CCceE-EEEeCCCeEEEEEcCCCceecccccccc
Q 015363 255 RINLWNLEISN-QSFNIVDVKPANMEDLTEVITSAEFH---PT---HCNML-AYSSSKGSIRLIDMRQSALCDTHSKLFE 326 (408)
Q Consensus 255 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~---p~---~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 326 (408)
.|.+||+.+.. +.++.+.+...... ....+..+++. |. +..++ ++=+...-|.++|+.+++.. +.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~-~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw----Rv~~ 198 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVE-KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW----NVTH 198 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCC-CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE----EEEC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcc-cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE----EEcc
Confidence 56678888431 56666665433233 24567888887 32 11233 33334678999999998653 2221
Q ss_pred cccCCC--Cccccccc----cceeEEEEEccC----CCEEEEeCCCeEEEEECC
Q 015363 327 EQEAPG--TRSFFTEI----IASISDIKFARN----GRHILSRDYMTLKLWDIN 370 (408)
Q Consensus 327 ~~~~~~--~~~~~~~h----~~~i~~~~~spd----g~~l~s~~d~~v~~wd~~ 370 (408)
.+..+. ......+. ...|..++++|+ ++.|+-..-..-++|.+.
T Consensus 199 ~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~ 252 (381)
T 3q6k_A 199 PTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVN 252 (381)
T ss_dssp GGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEE
T ss_pred CCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEE
Confidence 111111 11111222 247889999998 788876643334455554
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=86.68 E-value=17 Score=32.35 Aligned_cols=210 Identities=16% Similarity=0.197 Sum_probs=115.0
Q ss_pred EEECCCCCeEEEeecCCeEEEEEeCCCCCCCCcccccccccccccCCCccceeeeeccCCcccccccccccccceeEEEE
Q 015363 41 IEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRW 120 (408)
Q Consensus 41 ~~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~h~~~~~~~~~~~~~~~v~~v~~ 120 (408)
.-.+|..+.||.=. ..++.|+|+++... +..|. ..+.|.--.|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~k--------------------------lks~~----------~~e~VvfWkW 113 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSK--------------------------MKAHT----------MTDDVTFWKW 113 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEE--------------------------EEEEE----------CSSCCCEEEE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhh--------------------------hccee----------cCCCceEEEe
Confidence 44667766666654 56788888776542 33332 1256778888
Q ss_pred eecCCCcEEEEEeCCCeEEEEEcCC-CcEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccccccCcccc
Q 015363 121 CQSANSALYLLSTNDKTIKLWKVQE-KKVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFGCASNDSSF 199 (408)
Q Consensus 121 ~p~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 199 (408)
... +.|+..+ +..|.-|++.. ....+++..+..-. +..+. ....+++.+.+....-...
T Consensus 114 is~---~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~----~~QII-------nY~~d~~~kW~~l~GI~~~----- 173 (494)
T 1bpo_A 114 ISL---NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLA----GCQII-------NYRTDAKQKWLLLTGISAQ----- 173 (494)
T ss_dssp EET---TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGT----TCEEE-------EEEECTTSSEEEEEEEEEE-----
T ss_pred cCC---CeEEEEc-CCeeEEecccCCCCchhheecchhcc----cceEE-------EEEECCCCCeEEEEeeccc-----
Confidence 622 3565544 45899999974 34455555443221 12222 3444555555421100000
Q ss_pred CCCCCceeeeceeeeccccccccccceeeccccccceEEEEeCCCC---CEEEEe----cCCeEEEEeCCCC---Ccee-
Q 015363 200 PPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNNSDG---ETFISA----DDLRINLWNLEIS---NQSF- 268 (408)
Q Consensus 200 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~---~~l~~~----~d~~i~iwd~~~~---~~~~- 268 (408)
.+.-.|.+.+|. +.+ +..+. +.+|......+.+..+. .+|..+ ..+.++|.++... ...+
T Consensus 174 ~~~v~G~mQLYS-~er-------~~sQ~-ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~ 244 (494)
T 1bpo_A 174 QNRVVGAMQLYS-VDR-------KVSQP-IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP 244 (494)
T ss_dssp TTEEEEEEEEEE-STT-------CCEEE-ECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCC
T ss_pred CCcccceEEEee-ccc-------cccch-heeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCcc
Confidence 012246677776 222 11122 47887777666554322 233334 2489999998643 1111
Q ss_pred -eEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee
Q 015363 269 -NIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 269 -~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
+.+++.-. -..-.+-..++..++.. .++..-+.-|.|.+||+.++..+
T Consensus 245 kk~vdv~fp-pe~~~DFPvamqvs~ky-gviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 245 KKAVDVFFP-PEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp CEEEECCCC-TTSTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCEE
T ss_pred ceeeeeeCC-cccccCceeEEEecccC-CEEEEEecCceEEEEecccceee
Confidence 11221100 11223445688999888 78888889999999999999643
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.03 E-value=5.2 Score=34.17 Aligned_cols=29 Identities=0% Similarity=-0.002 Sum_probs=25.3
Q ss_pred cEEEEEeCCCeEEEEEcCCCcEEEEeccC
Q 015363 127 ALYLLSTNDKTIKLWKVQEKKVKKVFDWN 155 (408)
Q Consensus 127 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 155 (408)
.++++++.||.|.-.|..+|+.+..+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~ 39 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE 39 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 48899999999999999999988877664
No 330
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.02 E-value=15 Score=30.36 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=19.6
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCcEEEEec
Q 015363 126 SALYLLSTND-----KTIKLWKVQEKKVKKVFD 153 (408)
Q Consensus 126 ~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~ 153 (408)
+.+++.|+.+ ..+.++|+.+.+......
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 145 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD 145 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCC
Confidence 5677777643 368889998887766543
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=84.71 E-value=16 Score=30.34 Aligned_cols=28 Identities=14% Similarity=0.328 Sum_probs=20.6
Q ss_pred CcEEEEEeCC----CeEEEEEcCCCcEEEEec
Q 015363 126 SALYLLSTND----KTIKLWKVQEKKVKKVFD 153 (408)
Q Consensus 126 ~~~l~~~~~d----~~i~vwd~~~~~~~~~~~ 153 (408)
+.+++.|+.+ ..+.++|..+++......
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 5677777755 678899999887766544
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=83.87 E-value=45 Score=34.83 Aligned_cols=173 Identities=17% Similarity=0.198 Sum_probs=87.4
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCC-cEEEEeccCCCCcccCCCCCeEeecCCceeeEEccCCCeeecccc
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEK-KVKKVFDWNVHPEKAAGNGPIFGSHVSAIPKSYMANGGCGERNFG 191 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~ 191 (408)
.+|.--.|. + .+.|+..+ +..|.-|++... ....++..+..- .+..|. ....+++.+.+....-
T Consensus 106 e~VvfWkWi-s--~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L----~~~QIi-------nY~~d~~~kW~~l~gi 170 (1630)
T 1xi4_A 106 DDVTFWKWI-S--LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSL----AGCQII-------NYRTDAKQKWLLLTGI 170 (1630)
T ss_pred CCceEEEec-C--CCeeEEEc-CCeEEEeccCCCCccHHHHhcchhc----ccCeeE-------EeeeCCCCCeEEEEee
Confidence 667777885 2 23555544 457999999742 222333222111 011222 3344455554411100
Q ss_pred cccCccccCCCCCceeeeceeeeccccccccccceeeccccccceEEEEeC--CCC-CEEEEe----cCCeEEEEeCCCC
Q 015363 192 CASNDSSFPPGGVSSLRLPVVVTSQETNLVAGCRRIYAHAHDYHINSISNN--SDG-ETFISA----DDLRINLWNLEIS 264 (408)
Q Consensus 192 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~~-~~l~~~----~d~~i~iwd~~~~ 264 (408)
.. -.+.-.|.+.+|. +.+... +. +.+|......+... +.. .++..+ ..+.++|-++...
T Consensus 171 ~~-----~~~~v~G~mQLyS-~er~~s-------Q~-iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 171 SA-----QQNRVVGAMQLYS-VDRKVS-------QP-IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred cc-----CCCcccceeeeee-cccccc-------hh-hhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCC
Confidence 00 0123457777777 332111 11 36666655544443 222 233333 2378999988643
Q ss_pred ---Cceee--EeecCCCccc--CCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee
Q 015363 265 ---NQSFN--IVDVKPANME--DLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC 318 (408)
Q Consensus 265 ---~~~~~--~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 318 (408)
...+. .+++ .++ .-.+-..++..++.. .++..-+.-|.|.+||+.++..+
T Consensus 237 ~~~~~~f~kk~~~~---~~~~~~~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 237 PTGNQPFPKKAVDV---FFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred ccCCCCCccccccc---cCCcccccCcceEEEecccc-CEEEEEecCceEEEEecccchhh
Confidence 11111 1111 011 123334578888887 67778889999999999999643
No 333
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=80.42 E-value=23 Score=29.22 Aligned_cols=65 Identities=8% Similarity=0.098 Sum_probs=35.1
Q ss_pred CCCEEEEe-cC-----CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCC-----eEEEEEc
Q 015363 244 DGETFISA-DD-----LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG-----SIRLIDM 312 (408)
Q Consensus 244 ~~~~l~~~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~ 312 (408)
++.+++.| .+ ..+.+||..+ ..-..+ .. +.........+.+ ++ .+++.|+.++ .+.+||.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~-~~----~~~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTT-NAWRQV-AD----MNMCRRNAGVCAV--NG-LLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTT-TEEEEE-CC----CSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEET
T ss_pred CCEEEEECCCCCCcccceEEEEeCCC-CCEeeC-CC----CCCccccCeEEEE--CC-EEEEECCcCCCcccccEEEEcC
Confidence 56666665 32 4688999873 332222 11 1111111122222 55 7888887653 4889998
Q ss_pred CCCce
Q 015363 313 RQSAL 317 (408)
Q Consensus 313 ~~~~~ 317 (408)
.+.+-
T Consensus 275 ~~~~W 279 (302)
T 2xn4_A 275 TTDKW 279 (302)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 87643
No 334
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.65 E-value=52 Score=32.80 Aligned_cols=40 Identities=8% Similarity=0.199 Sum_probs=31.4
Q ss_pred ceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccC
Q 015363 114 KINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWN 155 (408)
Q Consensus 114 ~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 155 (408)
.+.+++.. ++..++++-+.|+++|+|++.++++.......
T Consensus 237 ~~~~~~~~--~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 237 TIISMIFL--STYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp CEEEEEEE--TTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred eEEEEeec--CCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 35566654 34668999999999999999999988876653
No 335
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.62 E-value=41 Score=31.98 Aligned_cols=39 Identities=13% Similarity=0.269 Sum_probs=31.4
Q ss_pred cceeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccC
Q 015363 113 EKINKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWN 155 (408)
Q Consensus 113 ~~v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 155 (408)
..|.++.+ + ..++++-+.|.++|+|++.++++.......
T Consensus 222 ~~Is~~~~--~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 222 SVISCKLF--H--ERYLIVLTQNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp CEEEEEEE--T--TTEEEEEETTCEEEEEETTTTEEEEEEETT
T ss_pred ceEEEecc--C--CcEEEEEEcCCeEEEEEcCCCceEEeeccc
Confidence 34666665 3 469999999999999999999988887773
No 336
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=79.41 E-value=46 Score=32.01 Aligned_cols=123 Identities=11% Similarity=0.030 Sum_probs=67.0
Q ss_pred cceEEEEeCCCCCEEEEecCCeEEEEeCCCCC-ceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEc
Q 015363 234 YHINSISNNSDGETFISADDLRINLWNLEISN-QSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDM 312 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 312 (408)
..|.++.-..+|.+.+...+ -+..++..+.. ..+..+........-....|.++.-.++| .+.+ |+ ++-|..||.
T Consensus 324 ~~v~~i~~D~~g~lWiGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWi-gt-~~GL~~~~~ 399 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWFGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQ-QLWI-AT-DGSINRYDY 399 (758)
T ss_dssp CBEEEEEECTTCCEEEEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTS-CEEE-EE-TTEEEEEET
T ss_pred ceEEEEEEcCCCCEEEeeCC-cceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCC-CEEE-Ee-CCcHhhcCc
Confidence 46888888888887776554 46666655321 11222111000000113458888888888 5444 44 456889998
Q ss_pred CCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECC
Q 015363 313 RQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDIN 370 (408)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~ 370 (408)
.+++.. .+....... ......|.++.-.++|.+.+....+-|.++|..
T Consensus 400 ~~~~~~-----~~~~~~~~~-----~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 400 ATRQFI-----HYNIVDNTG-----TYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKH 447 (758)
T ss_dssp TTTEEE-----EEEEECCC-------CBSSSEEEEEECTTSEEEEEESSSCEEEEEHH
T ss_pred CCCcEE-----EeecCCCcC-----CCCCceEEEEEEcCCCCEEEEECCCceEEEccc
Confidence 876432 111100000 000245888888888876665545567777754
No 337
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=76.01 E-value=32 Score=28.34 Aligned_cols=65 Identities=11% Similarity=0.140 Sum_probs=35.5
Q ss_pred CCCEEEEe-cC-----CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC-----CeEEEEEc
Q 015363 244 DGETFISA-DD-----LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK-----GSIRLIDM 312 (408)
Q Consensus 244 ~~~~l~~~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~ 312 (408)
++.+++.| .+ ..+.+||..+ ..-..+ .. +.........+.+ ++ .+++.|+.+ ..+.+||+
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~-~~----~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHT-GHWTNV-TP----MATKRSGAGVALL--ND-HIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTT-TEEEEE-CC----CSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEET
T ss_pred CCEEEEECCCCCCcccceEEEEeCCC-CcEEeC-CC----CCcccccceEEEE--CC-EEEEEeCCCCCcccceEEEEeC
Confidence 56666665 32 4688889873 322222 11 1111111122333 45 788888764 46899999
Q ss_pred CCCce
Q 015363 313 RQSAL 317 (408)
Q Consensus 313 ~~~~~ 317 (408)
.+.+-
T Consensus 230 ~~~~W 234 (301)
T 2vpj_A 230 RTDSW 234 (301)
T ss_dssp TTTEE
T ss_pred CCCcE
Confidence 87753
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=74.37 E-value=63 Score=31.03 Aligned_cols=115 Identities=12% Similarity=0.082 Sum_probs=67.0
Q ss_pred cceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCCeEEEEEcC
Q 015363 234 YHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDMR 313 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 313 (408)
..|.++....++.+.+...+ -|..++... .. +..+.... ........|.++...+++ ..|-.|+. +-+..+|..
T Consensus 146 ~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~-~~-~~~~~~~~-~~~~~~~~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~ 219 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYN-GLCRYIPSN-GK-FEGIPLPV-HSSQSNLFVNSLLEDTTR-QCVWIGTE-GYLFQYFPS 219 (758)
T ss_dssp SCEEEEEECTTCCEEEEETT-EEEEEETTT-TE-EEEECCCC-CTTCSSCCEEEEEEETTT-TEEEEEEE-EEEEEEETT
T ss_pred CeEEEEEEcCCCCEEEEeCC-CHhhCccCC-Cc-eEEecCCC-ccccccceeEEEEEECCC-CEEEEEEC-CCCeEEcCC
Confidence 45888888888887775543 477788763 22 22211110 000112348888888776 54444553 457888887
Q ss_pred CCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEeCCCeEEEEECCC
Q 015363 314 QSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSRDYMTLKLWDINM 371 (408)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~~d~~v~~wd~~~ 371 (408)
+++.. .+... ....|.++....+|.+.+.. ++-+.+++..+
T Consensus 220 ~~~~~-----~~~~l-----------~~~~i~~i~~d~~g~lWigT-~~Gl~~~~~~~ 260 (758)
T 3ott_A 220 TGQIK-----QTEAF-----------HNNSIKSLALDGNGDLLAGT-DNGLYVYHNDT 260 (758)
T ss_dssp TTEEE-----EEEEE-----------EEEEEEEEEECTTCCEEEEE-TTEEEEECCTT
T ss_pred CCeEE-----eccCC-----------CCCeEEEEEEcCCCCEEEEe-CCceeEEecCC
Confidence 65431 11110 02458888888888877655 44678888764
No 339
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=73.76 E-value=84 Score=32.14 Aligned_cols=115 Identities=15% Similarity=0.153 Sum_probs=63.3
Q ss_pred cceEEEEeCCCCCEEEEecCCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCC-----CceEEEEeC-CCeE
Q 015363 234 YHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTH-----CNMLAYSSS-KGSI 307 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-----~~~l~s~~~-dg~i 307 (408)
..|...+.+. ..++.+..+.+.++.++. +....... ..-...|.|+++.|.. ..+++.|.. |++|
T Consensus 514 ~~I~~As~n~--~~vvva~g~~l~~fel~~-~~L~~~~~------~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv 584 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAVGRALYYLQIHP-QELRQISH------TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA 584 (1158)
T ss_dssp CCCCEEEECS--SEEEEEETTEEEEEEEET-TEEEEEEE------EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEE
T ss_pred CEEEEEEeCC--CEEEEEECCEEEEEEeeC-Cceeeecc------cCCCCceEEEEeecCCCCcccccEEEEEECCCCEE
Confidence 3455555543 345555557788887763 22222111 1124568999998643 268999996 9999
Q ss_pred EEEEcCCCceecccccccccccCCCCccccccccceeEEEEEccCCCEEEEe-CCCeEEEEECC
Q 015363 308 RLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR-DYMTLKLWDIN 370 (408)
Q Consensus 308 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~-~d~~v~~wd~~ 370 (408)
+|+++...+.+. ...+..... ...|.-+.+ ....+|..| .||.+.-+.++
T Consensus 585 ~I~sL~~l~~~~--~~~L~~~~~----------p~si~l~~~-~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 585 RILKLPSFELLH--KEMLGGEII----------PRSILMTTF-ESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp EEEETTTCCEEE--EEECCSSCC----------EEEEEEEEE-TTEEEEEEEETTSEEEEEEEC
T ss_pred EEEECCCCCeEE--EEECCCCCC----------CcEEEEEEe-CCCcEEEEEeCCCeEEEEEEc
Confidence 999998654321 011111100 122333333 233567777 57877666554
No 340
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=71.40 E-value=30 Score=31.09 Aligned_cols=115 Identities=9% Similarity=0.089 Sum_probs=56.8
Q ss_pred CCceeeEEccCCC-eeecccccccCccccCCCCCceeeeceeeecccc-ccccccceeecc----ccccceEEEEeCCC-
Q 015363 172 VSAIPKSYMANGG-CGERNFGCASNDSSFPPGGVSSLRLPVVVTSQET-NLVAGCRRIYAH----AHDYHINSISNNSD- 244 (408)
Q Consensus 172 ~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~v~~i~~~~~- 244 (408)
..+..+++.|+|. .+ +.+...|.|++++ ...... .........+.. .....+..|+++|+
T Consensus 14 ~~P~~~a~~pdG~~rl------------~V~er~G~i~~~~-~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f 80 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRL------------FILEKEGYVKILT-PEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNY 80 (463)
T ss_dssp SSEEEEECCSSSSCCE------------EEEETTTEEEEEC-TTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTH
T ss_pred CCceEEEECCCCCeEE------------EEEeCCceEEEEe-CCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCC
Confidence 3445789999985 33 5556678888765 211100 000000001111 12356789999997
Q ss_pred ---CCEEEE-e--cC----------CeEEEEeCCCC-------CceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEE
Q 015363 245 ---GETFIS-A--DD----------LRINLWNLEIS-------NQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYS 301 (408)
Q Consensus 245 ---~~~l~~-~--~d----------~~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 301 (408)
+.+.++ . .+ ..|.-|.+... .....++.+.+ ....|. -..|+|.||| .++++.
T Consensus 81 ~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~-~~~~H~--g~~l~fgpDG-~LYv~~ 156 (463)
T 2wg3_C 81 KKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE-LHRKHL--GGQLLFGPDG-FLYIIL 156 (463)
T ss_dssp HHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE-SSSSSC--EEEEEECTTS-CEEEEE
T ss_pred cCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC-CCCccc--CCcEeECCCC-cEEEEe
Confidence 333333 2 22 14444655421 11122222211 123454 4789999999 666665
Q ss_pred eC
Q 015363 302 SS 303 (408)
Q Consensus 302 ~~ 303 (408)
+.
T Consensus 157 Gd 158 (463)
T 2wg3_C 157 GD 158 (463)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 341
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=68.74 E-value=48 Score=27.26 Aligned_cols=28 Identities=7% Similarity=0.207 Sum_probs=19.7
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCcEEEEec
Q 015363 126 SALYLLSTND-----KTIKLWKVQEKKVKKVFD 153 (408)
Q Consensus 126 ~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~ 153 (408)
+.+++.|+.+ ..+.+||..+.+......
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 5677777754 358889998887766543
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=67.24 E-value=57 Score=27.61 Aligned_cols=28 Identities=11% Similarity=0.279 Sum_probs=19.4
Q ss_pred CcEEEEEeC-C---------CeEEEEEcCCCcEEEEec
Q 015363 126 SALYLLSTN-D---------KTIKLWKVQEKKVKKVFD 153 (408)
Q Consensus 126 ~~~l~~~~~-d---------~~i~vwd~~~~~~~~~~~ 153 (408)
+.+++.|+. + ..+.+||+.+.+......
T Consensus 66 ~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 103 (357)
T 2uvk_A 66 GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMS 103 (357)
T ss_dssp TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSC
T ss_pred CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCC
Confidence 567777765 2 468889999887766543
No 343
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=67.15 E-value=53 Score=27.16 Aligned_cols=64 Identities=9% Similarity=0.173 Sum_probs=34.2
Q ss_pred CCCEEEEe-cC-----CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC-----CeEEEEEc
Q 015363 244 DGETFISA-DD-----LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK-----GSIRLIDM 312 (408)
Q Consensus 244 ~~~~l~~~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~ 312 (408)
++.+++.| .+ ..+.+||+.+ .. ...+. .+.........+.+ ++ .+++.|+.+ ..+.+||+
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~-~~-W~~~~----~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVET-ET-WTFVA----PMKHRRSALGITVH--QG-RIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTT-TE-EEECC----CCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEET
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCC-Cc-EEECC----CCCCCccceEEEEE--CC-EEEEEcCcCCCcccceEEEEcC
Confidence 56666665 32 5688999873 32 22211 11111111122222 45 788888754 45788888
Q ss_pred CCCc
Q 015363 313 RQSA 316 (408)
Q Consensus 313 ~~~~ 316 (408)
.+.+
T Consensus 286 ~~~~ 289 (308)
T 1zgk_A 286 DTDT 289 (308)
T ss_dssp TTTE
T ss_pred CCCE
Confidence 7764
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=66.94 E-value=24 Score=32.45 Aligned_cols=77 Identities=8% Similarity=0.065 Sum_probs=47.9
Q ss_pred eEEEEEcCCCCceEEEEeCCCeEEEEEcCCCcee-c----ccccccccccCCCCccccccccceeEEEEEccCCCEEEEe
Q 015363 285 ITSAEFHPTHCNMLAYSSSKGSIRLIDMRQSALC-D----THSKLFEEQEAPGTRSFFTEIIASISDIKFARNGRHILSR 359 (408)
Q Consensus 285 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~spdg~~l~s~ 359 (408)
...+.++|||..++++|--+.++.++|++..... . .+-..+.+.- +-.-.....+|.++| ..++.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~---------e~GlGPlHt~Fd~~G-~aYTt 394 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP---------ELGLGPLHTTFDGRG-NAYTT 394 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC---------BCCSCEEEEEECSSS-EEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec---------cCCCcccEEEECCCC-ceEee
Confidence 4578999999444555555899999999853210 0 0001111110 012356789999999 55554
Q ss_pred --CCCeEEEEECCC
Q 015363 360 --DYMTLKLWDINM 371 (408)
Q Consensus 360 --~d~~v~~wd~~~ 371 (408)
-|..|.-|++..
T Consensus 395 lfidSqvvkWni~~ 408 (638)
T 3sbq_A 395 LFIDSQVVKWNMEE 408 (638)
T ss_dssp ETTTTEEEEEEHHH
T ss_pred eeecceEEEEeccH
Confidence 479999999975
No 345
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=65.96 E-value=56 Score=27.07 Aligned_cols=27 Identities=7% Similarity=0.172 Sum_probs=18.6
Q ss_pred CcEEEEEeCC--------CeEEEEEcCCCcEEEEe
Q 015363 126 SALYLLSTND--------KTIKLWKVQEKKVKKVF 152 (408)
Q Consensus 126 ~~~l~~~~~d--------~~i~vwd~~~~~~~~~~ 152 (408)
+.+++.|+.+ ..+.++|..+.+.....
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC
Confidence 5677777632 45888999888766543
No 346
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=64.34 E-value=61 Score=26.87 Aligned_cols=65 Identities=3% Similarity=0.124 Sum_probs=34.8
Q ss_pred CCCEEEEe-c-C-----CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCCC-----eEEEEE
Q 015363 244 DGETFISA-D-D-----LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKG-----SIRLID 311 (408)
Q Consensus 244 ~~~~l~~~-~-d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd 311 (408)
++.+++.| . + ..+.+||..+ .. ...+. .+.........+.+ ++ ++++.|+.++ .+.+||
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~-W~~~~----~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd 218 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKK-FE-WKELA----PMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYS 218 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTT-TE-EEECC----CCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCC-Ce-EEECC----CCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEE
Confidence 45666665 3 2 4688888873 22 22211 11111111122222 55 7888887654 588899
Q ss_pred cCCCce
Q 015363 312 MRQSAL 317 (408)
Q Consensus 312 ~~~~~~ 317 (408)
+.+.+-
T Consensus 219 ~~~~~W 224 (315)
T 4asc_A 219 ITDNKW 224 (315)
T ss_dssp TTTTEE
T ss_pred CCCCeE
Confidence 887643
No 347
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=64.32 E-value=60 Score=26.81 Aligned_cols=65 Identities=11% Similarity=0.140 Sum_probs=35.3
Q ss_pred CCCEEEEe-cC-----CeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEEEeCC-----CeEEEEEc
Q 015363 244 DGETFISA-DD-----LRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK-----GSIRLIDM 312 (408)
Q Consensus 244 ~~~~l~~~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~ 312 (408)
++.+++.| .+ ..+.+||..+ .. ...+.. +.........+.+ ++ .+++.|+.+ ..+.+||+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~-~~-W~~~~~----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPER-NE-WRMITA----MNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTT-TE-EEECCC----CSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEET
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCC-Ce-EeeCCC----CCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeC
Confidence 56666665 32 4688888873 32 222111 1111111222333 55 788888764 56899999
Q ss_pred CCCce
Q 015363 313 RQSAL 317 (408)
Q Consensus 313 ~~~~~ 317 (408)
.+.+-
T Consensus 239 ~~~~W 243 (308)
T 1zgk_A 239 ETETW 243 (308)
T ss_dssp TTTEE
T ss_pred CCCcE
Confidence 87653
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.54 E-value=28 Score=32.33 Aligned_cols=60 Identities=7% Similarity=0.146 Sum_probs=38.0
Q ss_pred CeEEEEEcCCCCceEEEEeCC------------CeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEcc
Q 015363 284 VITSAEFHPTHCNMLAYSSSK------------GSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFAR 351 (408)
Q Consensus 284 ~v~~~~~~p~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~sp 351 (408)
..-.|.|+|.| .+++.-..+ ..+.+.+..+++.. +.+.++. .+.++.++|+|
T Consensus 477 ~PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~----rf~~~P~-----------gaE~TG~~fsp 540 (592)
T 3zwu_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIR----RFMVGPI-----------GCEVTGISFSP 540 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEE----EEEECCT-----------TCEEEEEEECT
T ss_pred CCcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEE----EEEeCCC-----------CccCcCeeECC
Confidence 34679999999 766554322 23555555555432 2233332 36799999999
Q ss_pred CCCEEEEe
Q 015363 352 NGRHILSR 359 (408)
Q Consensus 352 dg~~l~s~ 359 (408)
|++.|+..
T Consensus 541 Dg~tlfvn 548 (592)
T 3zwu_A 541 DQKTLFVG 548 (592)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 99988765
No 349
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=60.24 E-value=55 Score=32.63 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=29.2
Q ss_pred ceEEEEeCCCCCEEEEe-cCCeEEEEeCCCCCceeeEeec
Q 015363 235 HINSISNNSDGETFISA-DDLRINLWNLEISNQSFNIVDV 273 (408)
Q Consensus 235 ~v~~i~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~ 273 (408)
.+.+++..++..++++- .|+++|+|++. .+++....++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~-t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLS-TNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETT-TTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECC-CCCeEeeecc
Confidence 45667777788888776 99999999999 5666666554
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=56.61 E-value=1.4e+02 Score=28.45 Aligned_cols=28 Identities=11% Similarity=0.227 Sum_probs=19.6
Q ss_pred CCcEEEEEeCC------CeEEEEEcCCCcEEEEe
Q 015363 125 NSALYLLSTND------KTIKLWKVQEKKVKKVF 152 (408)
Q Consensus 125 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~ 152 (408)
++.+++.|+.+ ..+.+||..+.+.....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~ 484 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK 484 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECC
Confidence 56777887743 35788899888776653
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=56.49 E-value=90 Score=26.33 Aligned_cols=18 Identities=6% Similarity=-0.034 Sum_probs=13.8
Q ss_pred CeEEEEEcCCCcEEEEec
Q 015363 136 KTIKLWKVQEKKVKKVFD 153 (408)
Q Consensus 136 ~~i~vwd~~~~~~~~~~~ 153 (408)
..+.+||+.+.+......
T Consensus 168 ~~v~~yd~~~~~W~~~~~ 185 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGE 185 (357)
T ss_dssp CEEEEEETTTTEEEEEEE
T ss_pred ccEEEEeCCCCcEEECCC
Confidence 578999999888776643
No 352
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=55.41 E-value=59 Score=30.00 Aligned_cols=61 Identities=7% Similarity=0.150 Sum_probs=38.5
Q ss_pred CCeEEEEEcCCCCceEEEEeC------------CCeEEEEEcCCCceecccccccccccCCCCccccccccceeEEEEEc
Q 015363 283 EVITSAEFHPTHCNMLAYSSS------------KGSIRLIDMRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFA 350 (408)
Q Consensus 283 ~~v~~~~~~p~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~s 350 (408)
.....|.|+++| .+.++... ...+..++..+++.. ..+.+.. ...++.++|+
T Consensus 476 nsPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~----~fl~~P~-----------~aEpnGiafS 539 (592)
T 4a9v_A 476 NSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIR----RFMVGPI-----------GCEVTGISFS 539 (592)
T ss_dssp CCEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEE----EEEECCT-----------TCEEEEEEEC
T ss_pred CCCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEE----EEEeCCC-----------CccccCCEEC
Confidence 446789999999 66553221 125666666666432 2222221 2468999999
Q ss_pred cCCCEEEEe
Q 015363 351 RNGRHILSR 359 (408)
Q Consensus 351 pdg~~l~s~ 359 (408)
||++.|+.+
T Consensus 540 PD~ktLfV~ 548 (592)
T 4a9v_A 540 PDQKTLFVG 548 (592)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEE
Confidence 999988876
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.60 E-value=41 Score=34.30 Aligned_cols=39 Identities=8% Similarity=0.204 Sum_probs=30.6
Q ss_pred eeEEEEeecCCCcEEEEEeCCCeEEEEEcCCCcEEEEeccC
Q 015363 115 INKIRWCQSANSALYLLSTNDKTIKLWKVQEKKVKKVFDWN 155 (408)
Q Consensus 115 v~~v~~~p~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 155 (408)
+.+++.. .+..++++-+.|+++|+|++.++++.......
T Consensus 240 ~vs~~~~--~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 240 IISMIFL--STYNVLVMLSLDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp BSCCEEE--TTTTEEEEEBTTCEEEEEETTTTEEEEEEECC
T ss_pred eEEeecc--CCccEEEEEeCCCEEEEEECCCCCeEEeechh
Confidence 4455553 34668999999999999999999988876654
No 354
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=47.89 E-value=16 Score=31.15 Aligned_cols=28 Identities=4% Similarity=0.065 Sum_probs=20.8
Q ss_pred CCEEEEeC-CCeEEEEECCCCCCceeeeee
Q 015363 353 GRHILSRD-YMTLKLWDINMDSGPVATFQV 381 (408)
Q Consensus 353 g~~l~s~~-d~~v~~wd~~~~~~~~~~~~~ 381 (408)
+..+++|+ ++.+...|+.+ |+.+..+..
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~t-G~~~W~~~~ 139 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLN-GEIISAFGP 139 (339)
T ss_dssp CEEEEECEEEEEEEEEETTT-CCEEEEEST
T ss_pred CCEEEEEecCCEEEEEECCC-CcEEEEEec
Confidence 44566664 68999999998 788877764
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=41.69 E-value=14 Score=37.76 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=28.5
Q ss_pred cceEEEEECCCCCeEEEeecCCeEEEEEeCCCCC
Q 015363 36 DIISAIEFDKSGDHLATGDRGGRVVLFERTDTRD 69 (408)
Q Consensus 36 ~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~ 69 (408)
+.|.+++..++..++++-+.|+++|||++.++.+
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 4556667778888999999999999999988864
No 356
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=37.79 E-value=1.7e+02 Score=24.07 Aligned_cols=27 Identities=15% Similarity=0.300 Sum_probs=19.0
Q ss_pred CcEEEEEeCC-------CeEEEEEcCCCcEEEEe
Q 015363 126 SALYLLSTND-------KTIKLWKVQEKKVKKVF 152 (408)
Q Consensus 126 ~~~l~~~~~d-------~~i~vwd~~~~~~~~~~ 152 (408)
+.+++.|+.+ ..+.++|..+.+.....
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~ 143 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK 143 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECC
Confidence 5677777754 35788898888776654
No 357
>2loj_A Putative cytoplasmic protein; pathogenic bacterial protein, PSI-biology, northeast structu genomics consortium (NESG); NMR {Salmonella enterica subsp}
Probab=37.49 E-value=63 Score=19.41 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=26.5
Q ss_pred cceeeecccCcCcccceeeccceEEEEECCCCCeEEE
Q 015363 16 EWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLAT 52 (408)
Q Consensus 16 ~w~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s 52 (408)
.+.-...|+.. ....+.|.+.++.+.....|++|.+
T Consensus 27 ~i~S~~Ll~g~-~~v~I~H~G~~Y~LR~Tr~GKLILT 62 (63)
T 2loj_A 27 RVNSQALLGPD-GKVIIDHNGQEYLLRKTQAGKLLLT 62 (63)
T ss_dssp EEEGGGSSTTT-CEEEEEETTEEEEEEEETTTEEEEE
T ss_pred eEcHHHHhCCC-CEEEEEeCCeEEEeEEccCCceeec
Confidence 45555555532 3356889999999999999998875
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=37.28 E-value=39 Score=32.16 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=27.6
Q ss_pred eccceEEEEECCCCCeEEEeecCCeEEEEEeCCCCC
Q 015363 34 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRD 69 (408)
Q Consensus 34 h~~~V~~~~~s~~~~~l~sg~~dg~i~iw~~~~~~~ 69 (408)
....|.|+.+. ..++++-+.|.++|+|++.++.+
T Consensus 220 ~~~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 220 YDSVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp CCCEEEEEEET--TTEEEEEETTCEEEEEETTTTEE
T ss_pred cCceEEEeccC--CcEEEEEEcCCeEEEEEcCCCce
Confidence 34567777764 67999999999999999998864
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.90 E-value=2.2e+02 Score=26.33 Aligned_cols=60 Identities=12% Similarity=0.158 Sum_probs=35.9
Q ss_pred cceEEEEeCCCCCEEEEec-------------CCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCCCCceEEE
Q 015363 234 YHINSISNNSDGETFISAD-------------DLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAY 300 (408)
Q Consensus 234 ~~v~~i~~~~~~~~l~~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s 300 (408)
.....|.|+++|.+.+..+ ...|..++.. .++...++. ......++.++|+||+ +.|.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~-tGel~~fl~------~P~~aEpnGiafSPD~-ktLfV 547 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-TGEIRRFMV------GPIGCEVTGISFSPDQ-KTLFV 547 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT-TCCEEEEEE------CCTTCEEEEEEECTTS-SEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC-CCeEEEEEe------CCCCccccCCEECCCC-CEEEE
Confidence 4467899999999888441 1145555554 233333321 1123457999999999 55544
Q ss_pred E
Q 015363 301 S 301 (408)
Q Consensus 301 ~ 301 (408)
+
T Consensus 548 ~ 548 (592)
T 4a9v_A 548 G 548 (592)
T ss_dssp E
T ss_pred E
Confidence 4
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=30.22 E-value=2e+02 Score=26.70 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=16.2
Q ss_pred cccceEEEEeCCCCCEEEEe
Q 015363 232 HDYHINSISNNSDGETFISA 251 (408)
Q Consensus 232 ~~~~v~~i~~~~~~~~l~~~ 251 (408)
....++.++|+||++.|+..
T Consensus 529 ~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 529 IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TTCEEEEEEECTTSSEEEEE
T ss_pred CCccCcCeeECCCCCEEEEE
Confidence 35679999999999887764
No 361
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=27.03 E-value=4.1e+02 Score=25.17 Aligned_cols=70 Identities=17% Similarity=0.219 Sum_probs=38.7
Q ss_pred CCCCEEEEe-c--CCeEEEEeCCCCCceeeEeecCCCcccCCcCCeEEEEEcCC-CCceEEEEeC--C-----CeEEEEE
Q 015363 243 SDGETFISA-D--DLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPT-HCNMLAYSSS--K-----GSIRLID 311 (408)
Q Consensus 243 ~~~~~l~~~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~s~~~--d-----g~i~iwd 311 (408)
.++.+++.| . ++.+.+||..+. . ...+... ..+.........+.+..+ + .+++.|+. + ..+.+||
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~-~-W~~~~~~-g~~p~~r~~~~a~v~~~~~~-~iyv~GG~~~~~~~~~~~v~~yd 574 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEE-I-FKDVTPK-DEFFQNSLVSAGLEFDPVSK-QGIILGGGFMDQTTVSDKAIIFK 574 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTT-E-EEECCCS-SGGGGSCCBSCEEEEETTTT-EEEEECCBCTTSSCBCCEEEEEE
T ss_pred cCCEEEEECCCCCCCCEEEEECCCC-c-eEEccCC-CCCCCcccceeEEEEeCCCC-EEEEECCcCCCCCeeeCcEEEEE
Confidence 367777776 3 237889998842 2 2222110 001111122233555655 5 78888876 2 4688999
Q ss_pred cCCCc
Q 015363 312 MRQSA 316 (408)
Q Consensus 312 ~~~~~ 316 (408)
+.+..
T Consensus 575 ~~~~~ 579 (695)
T 2zwa_A 575 YDAEN 579 (695)
T ss_dssp ECTTC
T ss_pred ccCCc
Confidence 98875
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.62 E-value=3.8e+02 Score=23.20 Aligned_cols=75 Identities=5% Similarity=0.022 Sum_probs=42.1
Q ss_pred cceEEEEeCCC----CCEEEEe--cCCeEEEEeC---CCC--CceeeEeecCCCcccCCcCCeEEEEEc-CCCCceEEEE
Q 015363 234 YHINSISNNSD----GETFISA--DDLRINLWNL---EIS--NQSFNIVDVKPANMEDLTEVITSAEFH-PTHCNMLAYS 301 (408)
Q Consensus 234 ~~v~~i~~~~~----~~~l~~~--~d~~i~iwd~---~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~ 301 (408)
..+..|+++|+ ++.|.-. ....+.--.. +.. ...++.+. -.+-...-..++++ .+| .++++-
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G-----~kg~~s~~~~~~~D~~~G-~ly~~~ 293 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLG-----NRGKYNDAIALAYDPKTK-VIFFAE 293 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEE-----ECCTTCCEEEEEECTTTC-EEEEEE
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEee-----ecCCCCCcceEEEeCCCC-eEEEEe
Confidence 45889999998 6777655 3333332221 111 11111110 11111233456776 677 777777
Q ss_pred eCCCeEEEEEcCC
Q 015363 302 SSKGSIRLIDMRQ 314 (408)
Q Consensus 302 ~~dg~i~iwd~~~ 314 (408)
-....|..|+..+
T Consensus 294 ~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 294 ANTKQVSCWNTQK 306 (381)
T ss_dssp SSSSEEEEEETTS
T ss_pred ccCCeEEEEeCCC
Confidence 7889999999875
Done!