Query 015364
Match_columns 408
No_of_seqs 285 out of 1050
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 05:37:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015364.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015364hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2863 RNA lariat debranching 100.0 8E-110 2E-114 810.6 18.7 398 1-401 1-406 (456)
2 cd00844 MPP_Dbr1_N Dbr1 RNA la 100.0 8.5E-71 1.8E-75 534.1 25.3 257 3-259 1-262 (262)
3 KOG2476 Uncharacterized conser 100.0 4.4E-40 9.4E-45 330.2 19.1 228 1-266 6-243 (528)
4 cd07380 MPP_CWF19_N Schizosacc 100.0 1.4E-37 3E-42 278.5 13.8 144 4-252 1-150 (150)
5 PF05011 DBR1: Lariat debranch 100.0 1.6E-36 3.4E-41 270.2 13.4 133 235-367 1-145 (145)
6 cd07388 MPP_Tt1561 Thermus the 99.9 5.4E-21 1.2E-25 182.0 22.0 207 1-265 5-217 (224)
7 cd07392 MPP_PAE1087 Pyrobaculu 99.9 4.3E-20 9.4E-25 167.5 19.0 186 3-249 1-187 (188)
8 COG2129 Predicted phosphoester 99.8 2.3E-17 5E-22 155.0 20.0 209 1-265 4-215 (226)
9 PF14582 Metallophos_3: Metall 99.7 8.4E-16 1.8E-20 144.6 14.7 211 2-252 7-235 (255)
10 cd07397 MPP_DevT Myxococcus xa 99.6 1.9E-14 4.1E-19 138.0 14.4 210 1-252 1-234 (238)
11 cd07379 MPP_239FB Homo sapiens 99.5 1.1E-13 2.3E-18 121.0 13.1 135 2-250 1-135 (135)
12 KOG3947 Phosphoesterases [Gene 99.5 2.2E-13 4.9E-18 130.9 13.0 207 2-267 63-299 (305)
13 cd07402 MPP_GpdQ Enterobacter 99.4 8.4E-12 1.8E-16 118.2 18.4 195 2-251 1-209 (240)
14 PF00149 Metallophos: Calcineu 99.4 1.1E-12 2.3E-17 112.1 10.0 188 1-229 1-199 (200)
15 TIGR03729 acc_ester putative p 99.4 4.8E-12 1E-16 121.0 15.4 208 2-250 1-236 (239)
16 cd07404 MPP_MS158 Microscilla 99.3 1.2E-11 2.5E-16 111.4 11.8 152 3-234 1-153 (166)
17 cd07403 MPP_TTHA0053 Thermus t 99.2 5.6E-11 1.2E-15 103.7 10.9 66 169-251 58-123 (129)
18 PF12850 Metallophos_2: Calcin 99.2 1.1E-10 2.4E-15 102.6 12.8 150 1-265 1-154 (156)
19 PRK11148 cyclic 3',5'-adenosin 99.2 2.3E-09 5.1E-14 104.6 19.7 182 1-234 15-211 (275)
20 TIGR00040 yfcE phosphoesterase 99.1 1.2E-09 2.6E-14 97.9 13.8 64 1-88 1-64 (158)
21 cd07393 MPP_DR1119 Deinococcus 99.1 5.1E-09 1.1E-13 100.0 18.4 181 3-233 1-208 (232)
22 cd00841 MPP_YfcE Escherichia c 99.1 2.9E-09 6.2E-14 94.5 15.6 59 2-88 1-59 (155)
23 cd07396 MPP_Nbla03831 Homo sap 99.1 1.4E-08 3.1E-13 98.8 19.6 106 1-126 1-121 (267)
24 cd00838 MPP_superfamily metall 99.0 3.1E-09 6.7E-14 88.7 11.7 119 4-234 1-119 (131)
25 cd07400 MPP_YydB Bacillus subt 99.0 8.3E-09 1.8E-13 90.3 13.2 50 170-235 81-130 (144)
26 PRK05340 UDP-2,3-diacylglucosa 99.0 7.7E-09 1.7E-13 99.2 14.0 222 1-261 1-228 (241)
27 cd07385 MPP_YkuE_C Bacillus su 99.0 6.5E-09 1.4E-13 97.3 13.2 104 1-121 2-110 (223)
28 cd00839 MPP_PAPs purple acid p 98.8 3E-08 6.4E-13 96.9 12.7 185 1-229 5-204 (294)
29 cd00840 MPP_Mre11_N Mre11 nucl 98.8 2.3E-08 5E-13 93.1 10.4 183 2-232 1-203 (223)
30 cd07395 MPP_CSTP1 Homo sapiens 98.8 6.5E-07 1.4E-11 86.4 20.5 195 2-234 6-222 (262)
31 PRK04036 DNA polymerase II sma 98.8 1.9E-07 4.2E-12 99.1 18.2 125 1-127 244-388 (504)
32 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 2.8E-07 6.2E-12 87.9 17.3 111 3-126 1-114 (231)
33 cd07401 MPP_TMEM62_N Homo sapi 98.7 4.6E-07 9.9E-12 87.9 16.8 196 3-237 2-218 (256)
34 cd07399 MPP_YvnB Bacillus subt 98.7 7.1E-07 1.5E-11 84.3 17.5 195 1-270 1-205 (214)
35 PLN02533 probable purple acid 98.7 5.9E-07 1.3E-11 93.5 17.1 181 1-233 140-336 (427)
36 cd07394 MPP_Vps29 Homo sapiens 98.7 6.7E-07 1.5E-11 82.4 15.4 38 210-253 98-135 (178)
37 PRK11340 phosphodiesterase Yae 98.7 4.9E-07 1.1E-11 88.4 15.2 104 1-124 50-166 (271)
38 PHA03008 hypothetical protein; 98.7 9.7E-08 2.1E-12 88.0 8.7 97 102-229 99-203 (234)
39 cd07378 MPP_ACP5 Homo sapiens 98.6 1E-06 2.2E-11 85.6 16.3 209 1-251 1-230 (277)
40 cd08163 MPP_Cdc1 Saccharomyces 98.6 1.5E-06 3.3E-11 84.7 17.5 173 30-234 45-232 (257)
41 COG0622 Predicted phosphoester 98.6 9.1E-07 2E-11 81.3 14.7 89 1-126 2-90 (172)
42 PHA02546 47 endonuclease subun 98.6 4.5E-07 9.8E-12 91.6 13.8 110 1-123 1-128 (340)
43 cd07386 MPP_DNA_pol_II_small_a 98.6 5.4E-07 1.2E-11 86.5 13.5 220 4-270 2-237 (243)
44 PRK09453 phosphodiesterase; Pr 98.5 4.8E-07 1E-11 83.0 10.1 105 1-125 1-105 (182)
45 cd07383 MPP_Dcr2 Saccharomyces 98.4 3E-06 6.4E-11 78.7 12.0 74 1-86 3-87 (199)
46 PHA02239 putative protein phos 98.4 7.7E-07 1.7E-11 85.6 7.2 73 1-88 1-73 (235)
47 COG1409 Icc Predicted phosphoh 98.3 2.8E-05 6.1E-10 74.8 16.4 77 1-93 1-83 (301)
48 PRK00166 apaH diadenosine tetr 98.2 1.2E-06 2.5E-11 86.3 5.2 69 1-88 1-69 (275)
49 cd07423 MPP_PrpE Bacillus subt 98.2 2.3E-06 5.1E-11 81.8 5.5 73 1-88 1-80 (234)
50 cd00845 MPP_UshA_N_like Escher 98.2 0.00011 2.4E-09 70.4 16.7 112 1-127 1-136 (252)
51 cd07410 MPP_CpdB_N Escherichia 98.1 0.00014 3.1E-09 71.0 17.1 223 1-265 1-257 (277)
52 cd07424 MPP_PrpA_PrpB PrpA and 98.1 5.1E-06 1.1E-10 77.9 6.5 67 1-88 1-67 (207)
53 COG1768 Predicted phosphohydro 98.1 8.2E-05 1.8E-09 68.5 13.1 175 1-229 1-198 (230)
54 COG0420 SbcD DNA repair exonuc 98.1 9.7E-06 2.1E-10 83.1 8.1 78 1-91 1-91 (390)
55 cd08166 MPP_Cdc1_like_1 unchar 98.1 4.5E-05 9.8E-10 71.5 11.7 41 170-235 112-152 (195)
56 TIGR00619 sbcd exonuclease Sbc 98.1 9.4E-06 2E-10 78.8 7.4 79 1-91 1-91 (253)
57 cd07406 MPP_CG11883_N Drosophi 98.0 0.0005 1.1E-08 66.7 18.6 112 1-127 1-137 (257)
58 cd07398 MPP_YbbF-LpxH Escheric 98.0 3.6E-05 7.8E-10 71.7 9.8 111 4-126 1-116 (217)
59 PRK10966 exonuclease subunit S 97.9 2.3E-05 5E-10 81.2 7.7 77 1-91 1-90 (407)
60 cd07409 MPP_CD73_N CD73 ecto-5 97.9 0.00074 1.6E-08 66.5 17.8 112 1-127 1-149 (281)
61 TIGR00583 mre11 DNA repair pro 97.9 3.8E-05 8.2E-10 79.6 8.9 81 1-89 4-124 (405)
62 PRK11439 pphA serine/threonine 97.9 1.5E-05 3.4E-10 75.5 5.4 67 1-88 17-83 (218)
63 cd07408 MPP_SA0022_N Staphyloc 97.9 0.00042 9.2E-09 67.1 15.5 110 1-126 1-134 (257)
64 cd07412 MPP_YhcR_N Bacillus su 97.9 0.00056 1.2E-08 67.6 16.4 221 1-266 1-271 (288)
65 PRK13625 bis(5'-nucleosyl)-tet 97.9 2.2E-05 4.7E-10 75.9 5.7 73 1-88 1-79 (245)
66 PRK09968 serine/threonine-spec 97.8 3.2E-05 7E-10 73.4 5.6 66 2-88 16-81 (218)
67 cd00842 MPP_ASMase acid sphing 97.8 0.00053 1.2E-08 67.4 14.4 190 15-235 54-266 (296)
68 TIGR00668 apaH bis(5'-nucleosy 97.7 3.4E-05 7.4E-10 76.0 4.7 69 1-88 1-69 (279)
69 cd08162 MPP_PhoA_N Synechococc 97.7 0.0048 1E-07 61.9 19.9 119 1-127 1-165 (313)
70 cd07422 MPP_ApaH Escherichia c 97.7 6.5E-05 1.4E-09 73.3 6.2 67 3-88 1-67 (257)
71 cd00144 MPP_PPP_family phospho 97.7 7.8E-05 1.7E-09 69.9 6.1 68 4-88 1-68 (225)
72 cd07421 MPP_Rhilphs Rhilph pho 97.6 0.00014 3.1E-09 72.1 7.9 74 2-88 3-80 (304)
73 cd07425 MPP_Shelphs Shewanella 97.6 9.2E-05 2E-09 69.9 6.3 75 4-88 1-80 (208)
74 TIGR01530 nadN NAD pyrophospha 97.6 0.00072 1.6E-08 72.8 13.5 110 1-125 1-146 (550)
75 cd07413 MPP_PA3087 Pseudomonas 97.6 0.00011 2.3E-09 70.0 6.2 70 4-88 2-76 (222)
76 KOG2679 Purple (tartrate-resis 97.6 0.00071 1.5E-08 66.1 11.4 236 1-278 44-298 (336)
77 cd07411 MPP_SoxB_N Thermus the 97.6 0.0033 7.1E-08 61.2 16.2 111 1-127 1-147 (264)
78 cd07405 MPP_UshA_N Escherichia 97.6 0.0061 1.3E-07 60.2 18.1 113 1-127 1-138 (285)
79 PRK09419 bifunctional 2',3'-cy 97.5 0.0023 4.9E-08 74.7 16.1 191 1-235 661-887 (1163)
80 KOG1378 Purple acid phosphatas 97.4 0.0023 5E-08 66.6 13.1 188 2-235 149-351 (452)
81 COG0737 UshA 5'-nucleotidase/2 97.3 0.0045 9.7E-08 66.0 14.8 112 1-126 27-167 (517)
82 cd07390 MPP_AQ1575 Aquifex aeo 97.3 0.00086 1.9E-08 60.9 7.8 97 4-123 2-113 (168)
83 cd07387 MPP_PolD2_C PolD2 (DNA 97.3 0.0073 1.6E-07 59.1 14.2 220 2-265 1-248 (257)
84 PTZ00422 glideosome-associated 97.3 0.013 2.9E-07 60.5 16.8 189 1-230 27-260 (394)
85 COG1311 HYS2 Archaeal DNA poly 97.2 0.0085 1.8E-07 62.8 14.3 217 1-270 226-464 (481)
86 TIGR03767 P_acnes_RR metalloph 97.1 0.033 7.3E-07 58.9 18.5 56 165-231 336-393 (496)
87 PRK09558 ushA bifunctional UDP 97.1 0.012 2.6E-07 63.4 15.7 112 1-126 35-172 (551)
88 cd07391 MPP_PF1019 Pyrococcus 97.0 0.0017 3.7E-08 59.1 7.0 72 4-88 1-88 (172)
89 smart00156 PP2Ac Protein phosp 97.0 0.0016 3.5E-08 64.0 6.5 72 1-88 28-99 (271)
90 TIGR00024 SbcD_rel_arch putati 97.0 0.0023 4.9E-08 61.3 7.4 71 2-88 16-102 (225)
91 cd07420 MPP_RdgC Drosophila me 97.0 0.0018 3.8E-08 65.3 6.9 60 204-266 250-311 (321)
92 PRK09418 bifunctional 2',3'-cy 96.9 0.027 5.9E-07 63.1 16.4 120 1-126 40-208 (780)
93 cd07416 MPP_PP2B PP2B, metallo 96.8 0.0027 5.9E-08 63.5 6.4 71 2-88 44-114 (305)
94 PRK09419 bifunctional 2',3'-cy 96.6 0.046 9.9E-07 64.0 16.1 117 1-126 42-198 (1163)
95 PRK11907 bifunctional 2',3'-cy 96.6 0.047 1E-06 61.4 15.5 120 1-126 116-273 (814)
96 cd07414 MPP_PP1_PPKL PP1, PPKL 96.6 0.0037 8E-08 62.2 6.1 60 204-266 219-280 (293)
97 PTZ00480 serine/threonine-prot 96.5 0.0051 1.1E-07 62.0 6.5 60 204-266 228-289 (320)
98 cd07415 MPP_PP2A_PP4_PP6 PP2A, 96.4 0.005 1.1E-07 61.1 5.7 60 204-266 211-272 (285)
99 PTZ00239 serine/threonine prot 96.4 0.0056 1.2E-07 61.3 5.9 61 204-266 212-274 (303)
100 PRK09420 cpdB bifunctional 2', 96.4 0.089 1.9E-06 58.0 15.7 116 1-126 26-182 (649)
101 cd07417 MPP_PP5_C PP5, C-termi 96.4 0.0064 1.4E-07 61.2 6.2 59 204-265 230-290 (316)
102 TIGR01390 CycNucDiestase 2',3' 96.2 0.14 2.9E-06 56.3 15.9 116 1-126 3-159 (626)
103 cd07419 MPP_Bsu1_C Arabidopsis 96.2 0.013 2.8E-07 58.8 7.4 59 204-265 239-299 (311)
104 COG1407 Predicted ICC-like pho 96.2 0.017 3.7E-07 55.7 7.8 74 2-88 21-110 (235)
105 PTZ00244 serine/threonine-prot 96.2 0.0079 1.7E-07 59.9 5.6 59 204-265 221-281 (294)
106 cd07407 MPP_YHR202W_N Saccharo 96.2 0.026 5.6E-07 55.9 9.2 114 1-126 6-155 (282)
107 COG2908 Uncharacterized protei 96.2 0.026 5.5E-07 54.4 8.7 107 4-125 1-113 (237)
108 cd07418 MPP_PP7 PP7, metalloph 96.1 0.011 2.4E-07 60.8 6.2 70 2-88 67-138 (377)
109 PF04042 DNA_pol_E_B: DNA poly 96.1 0.043 9.3E-07 51.1 9.7 122 3-126 1-137 (209)
110 cd07384 MPP_Cdc1_like Saccharo 95.9 0.023 4.9E-07 52.0 6.8 52 30-87 45-99 (171)
111 cd08165 MPP_MPPE1 human MPPE1 95.8 0.029 6.4E-07 50.4 7.1 50 30-87 38-88 (156)
112 COG4186 Predicted phosphoester 95.8 0.026 5.6E-07 51.2 6.5 69 2-88 5-86 (186)
113 KOG2310 DNA repair exonuclease 95.5 0.035 7.7E-07 58.9 7.3 81 1-89 14-134 (646)
114 cd07382 MPP_DR1281 Deinococcus 95.5 0.24 5.2E-06 48.4 12.5 41 2-44 1-43 (255)
115 TIGR00282 metallophosphoestera 95.3 0.1 2.2E-06 51.3 9.5 41 1-43 1-43 (266)
116 COG1408 Predicted phosphohydro 95.3 0.046 9.9E-07 54.3 6.8 75 1-89 45-119 (284)
117 KOG3325 Membrane coat complex 94.7 0.19 4.2E-06 45.3 8.3 108 1-173 1-113 (183)
118 cd08164 MPP_Ted1 Saccharomyces 93.9 0.18 3.8E-06 47.4 6.9 52 30-87 44-110 (193)
119 KOG0373 Serine/threonine speci 92.6 0.24 5.2E-06 47.4 5.6 70 3-89 48-118 (306)
120 KOG3662 Cell division control 91.9 0.57 1.2E-05 48.7 7.9 52 30-88 93-144 (410)
121 TIGR03768 RPA4764 metallophosp 91.9 0.31 6.7E-06 51.5 6.0 62 13-88 84-170 (492)
122 cd07381 MPP_CapA CapA and rela 91.4 7.6 0.00016 36.9 14.7 55 73-128 75-141 (239)
123 KOG0372 Serine/threonine speci 91.4 0.4 8.8E-06 46.6 5.7 70 3-89 45-115 (303)
124 KOG0374 Serine/threonine speci 90.6 0.56 1.2E-05 47.7 6.2 61 204-267 230-292 (331)
125 smart00854 PGA_cap Bacterial c 89.8 19 0.00041 34.3 18.1 113 2-128 1-137 (239)
126 KOG0371 Serine/threonine prote 89.7 0.82 1.8E-05 44.8 6.2 69 3-89 62-132 (319)
127 COG1692 Calcineurin-like phosp 86.1 1.4 3.1E-05 42.8 5.5 42 1-44 1-44 (266)
128 KOG1432 Predicted DNA repair e 84.4 1.7 3.6E-05 44.3 5.2 52 30-92 100-151 (379)
129 KOG0375 Serine-threonine phosp 80.7 2.7 5.9E-05 43.0 5.1 69 3-88 90-159 (517)
130 KOG3818 DNA polymerase epsilon 78.0 15 0.00032 38.8 9.5 42 2-43 284-326 (525)
131 KOG2047 mRNA splicing factor [ 76.7 1.3 2.8E-05 48.4 1.6 24 384-407 790-813 (835)
132 KOG0377 Protein serine/threoni 72.7 1.3 2.7E-05 46.5 0.2 69 3-88 167-237 (631)
133 COG1058 CinA Predicted nucleot 64.7 37 0.0008 33.4 8.5 106 2-126 39-153 (255)
134 KOG2863 RNA lariat debranching 58.2 7.1 0.00015 40.2 2.3 61 272-333 357-423 (456)
135 PF10686 DUF2493: Protein of u 57.9 29 0.00062 27.3 5.3 37 1-40 4-41 (71)
136 cd07389 MPP_PhoD Bacillus subt 56.9 15 0.00032 34.3 4.2 40 2-43 1-42 (228)
137 PTZ00235 DNA polymerase epsilo 55.5 40 0.00087 33.8 7.1 43 1-43 28-76 (291)
138 KOG3770 Acid sphingomyelinase 55.0 34 0.00073 37.3 6.9 66 14-88 195-263 (577)
139 KOG1625 DNA polymerase alpha-p 49.7 1.4E+02 0.003 32.7 10.3 107 13-124 358-473 (600)
140 cd08165 MPP_MPPE1 human MPPE1 45.7 18 0.00039 32.3 2.7 21 213-233 117-137 (156)
141 PF13277 YmdB: YmdB-like prote 45.3 47 0.001 32.6 5.7 40 4-45 1-42 (253)
142 PF09423 PhoD: PhoD-like phosp 42.2 20 0.00044 37.5 2.8 39 1-44 106-146 (453)
143 cd06403 PB1_Par6 The PB1 domai 36.2 2E+02 0.0043 23.4 6.9 42 4-47 15-60 (80)
144 PF13483 Lactamase_B_3: Beta-l 35.2 50 0.0011 29.1 3.9 120 76-226 37-163 (163)
145 PF03490 Varsurf_PPLC: Variant 27.4 49 0.0011 24.4 1.9 27 61-90 12-38 (51)
146 COG5214 POL12 DNA polymerase a 25.7 2.7E+02 0.0058 29.6 7.6 102 13-121 322-436 (581)
147 PRK03673 hypothetical protein; 23.1 5E+02 0.011 27.1 9.2 35 3-44 40-74 (396)
148 KOG4419 5' nucleotidase [Nucle 22.9 7.7E+02 0.017 27.3 10.7 58 209-266 246-317 (602)
149 COG2047 Uncharacterized protei 21.9 72 0.0016 30.9 2.5 19 30-48 83-101 (258)
150 KOG1752 Glutaredoxin and relat 21.9 90 0.002 26.4 2.9 39 62-102 56-95 (104)
151 TIGR03768 RPA4764 metallophosp 20.8 2.1E+02 0.0046 30.8 5.9 23 209-231 389-412 (492)
152 PF00462 Glutaredoxin: Glutare 20.5 1E+02 0.0022 22.3 2.6 12 74-85 48-59 (60)
No 1
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=100.00 E-value=8.4e-110 Score=810.64 Aligned_cols=398 Identities=52% Similarity=0.865 Sum_probs=360.6
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|||||.|||||+|+.||++|..++++.+.++|+||||||||+.||..|+.+|+||+|||+|++|++||+|+.+||+||||
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 99999999999999999999999998778999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHH
Q 015364 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK 160 (408)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~k 160 (408)
||||||+++||+||+|||||||||||||.+||++++|+||||+||||+++||+++|+|++||+.+++||+||+|+.||.+
T Consensus 81 IGGNHEAsnyL~eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~stiRsiYHvR~~dV~~ 160 (456)
T KOG2863|consen 81 IGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTIRSIYHVRISDVAK 160 (456)
T ss_pred ecCchHHHHHHHhcccCceeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhhhhhhhhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeeccCCC
Q 015364 161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240 (408)
Q Consensus 161 L~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~~~~ 240 (408)
|+++..++|||||||||+||..|||.++|+|.||||++|++.+.+||+++.+|+++|||+||||||+|++|+|.+.|+.+
T Consensus 161 Lkqlk~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yWfsAHLH~KFaA~v~H~~~ 240 (456)
T KOG2863|consen 161 LKQLKHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYWFSAHLHVKFAALVQHNKR 240 (456)
T ss_pred HHhhcCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchhhhhhHhhHHhhhhcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeccccCCCCCeeEEEeccCCC-CCceeeeCHHHHHHHHHhCCCCCCCCCCCCCCCCC------CCchhHHHHH
Q 015364 241 SPVTKFLALDKCLPRRKFLQVFEIESGQ-GPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQ------HDMNDCRQWV 313 (408)
Q Consensus 241 ~~~TRFlaL~k~~~~~k~l~a~~i~~~~-~~~~l~~d~ewl~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 313 (408)
.++|+|+||+||+|+++||++++++.++ +++.+.||.|||+|+|.|+.+++.......+|+.. ...++.+.|+
T Consensus 241 ~~~tkflaldKclp~~~flqile~~sdp~g~~~~eyd~ewlsi~~~tn~l~~~k~~~~~~p~~~~~r~e~~~~ep~~~~~ 320 (456)
T KOG2863|consen 241 SHVTKFLALDKCLPNRNFLQILEIPSDPRGPMNVEYDNEWLSILRETNFLILVKCRYRNRPNRDLCRLEILEKEPDLSHV 320 (456)
T ss_pred CCCcccccccccCCCcchhhhccCCCCCCCCcccchhhhHHHhhhccchhhhhhhhhhcCCcccchhhhccccCCccchh
Confidence 9999999999999999999999998876 88999999999999999999999999888887632 3456788888
Q ss_pred HHHhhhCCCCCCCceEecCCCCCCCcCccCCCCCCCCChhHHHHHHHcC-CCcccCCCcCCCCCCCCCCCCCCCCCCCCC
Q 015364 314 RSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLE-LPNLFENALESREPTQSPATLDHKGPDLDP 392 (408)
Q Consensus 314 ~~~~~~~~~~~~~f~~~~p~~~~~~~~~~~~~~~~~~n~qt~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (408)
...+......|+||.+|++.|++..+ ..|+..-.||||+.||+.|| |.........+++..-.....+..-..+++
T Consensus 321 ~~k~~~~l~~~~~~~~~~~~~~~~~p---~~~~~~~~~P~~~~f~a~l~rl~~~~~~~~~~~d~dlps~~~~e~~t~~~~ 397 (456)
T KOG2863|consen 321 SWKDENHLMVPDNFSRTNFVYDPKEP---IVQNLHSNNPQTSVFSAELSRLRAMHVLREIERDIDLPSYDSPEPYTLKIQ 397 (456)
T ss_pred hhcchhhhcCCCccccceeeeccccc---cccccccCCCchhhHHHHHhhhhhhhhhhhhhcCCCccccCCccccccccH
Confidence 88888888899999999999998765 24577788999999999998 554433333332222222211212235677
Q ss_pred CCCCCCCcc
Q 015364 393 EEIPIDDED 401 (408)
Q Consensus 393 ~~~~~~~~~ 401 (408)
+||++|++.
T Consensus 398 ~e~~~de~~ 406 (456)
T KOG2863|consen 398 KEEMVDEKA 406 (456)
T ss_pred HHHHhhhhh
Confidence 788777654
No 2
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=100.00 E-value=8.5e-71 Score=534.08 Aligned_cols=257 Identities=65% Similarity=1.196 Sum_probs=246.1
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEc
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~ 82 (408)
|+|+||+||+++.+|++++.++++++.++|+|||||||+..++..|+++|+||+||+.+++|++|++|++++|+|||||+
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 79999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHHHh
Q 015364 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (408)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~kL~ 162 (408)
||||+++++.++.+|||+++||+||++++|++++|+||+|+||+++..+|.+++++.+||++++++++||+|+.++++|.
T Consensus 81 GNHE~~~~l~~l~~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~ 160 (262)
T cd00844 81 GNHEASNYLWELPYGGWVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLK 160 (262)
T ss_pred CCCCCHHHHHhhcCCCeecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHH
Confidence 99999999999989999999999999999999999999999999999999888778899999999999999999999998
Q ss_pred ccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeeccCC---
Q 015364 163 QIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGE--- 239 (408)
Q Consensus 163 ~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~~~--- 239 (408)
.+..++||||||+||+||.++++..+|+++||+|++++..+.+||+++++|++.+|||||||||+|++|++.+.|..
T Consensus 161 ~~~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~~~~~~~ 240 (262)
T cd00844 161 QLKQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVPHENKSP 240 (262)
T ss_pred hcCCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecCCccccc
Confidence 88789999999999999999999999999999999999999999999999999999999999999999999887742
Q ss_pred --CCCeeEEEeccccCCCCCee
Q 015364 240 --DSPVTKFLALDKCLPRRKFL 259 (408)
Q Consensus 240 --~~~~TRFlaL~k~~~~~k~l 259 (408)
..++|||||||||+|+|+||
T Consensus 241 ~~~~~~TRFiaL~k~~~~~~~~ 262 (262)
T cd00844 241 GNTNKETKFLALDKCLPGRDFL 262 (262)
T ss_pred CCCCcceEEEEcccccCCCCCC
Confidence 46799999999999999986
No 3
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=4.4e-40 Score=330.24 Aligned_cols=228 Identities=28% Similarity=0.476 Sum_probs=183.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
.||||+||+.|+++.++++|+++++|+| |||+|||+|+||..+.. ..+|.+|..|.+++|+||||
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk~G-pFd~liCvGnfF~~~~~--------------~~e~~~ykng~~~vPiptY~ 70 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKKSG-PFDLLICVGNFFGHDTQ--------------NAEVEKYKNGTKKVPIPTYF 70 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhcCC-CceEEEEecccCCCccc--------------hhHHHHHhcCCccCceeEEE
Confidence 3899999999999999999999999999 99999999999986322 35789999999999999999
Q ss_pred EcCCC-CChhhHHHHhhCCccCCceEEecCceEEEE-CCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHH
Q 015364 81 IGGNH-EASNYLWELYYGGWAAPNIYFLGFAGVVKF-GNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV 158 (408)
Q Consensus 81 I~GNH-E~~~~l~el~~gg~va~NI~yLg~~gv~~i-~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv 158 (408)
.++|- +...|+.. .+|+++|+|++|||+.|+++. .|++||++||.+....+. .-|+..++.++.|- .++
T Consensus 71 ~g~~~~~~~ky~~n-~~g~Ei~~Nlt~Lg~~G~~~l~sGl~IaYLsG~e~~~~~~------~~fs~~dv~~l~~~--~~~ 141 (528)
T KOG2476|consen 71 LGDNANETEKYFEN-SDGKEIAENLTYLGRKGTYKLASGLTIAYLSGPESSEKGE------SKFSQADVDELRHR--LDT 141 (528)
T ss_pred ecCCCCccceeccc-CCCcccccceeeecccceEeecCCcEEEEeeccccccccc------cccCHHHHHHHhcc--ccc
Confidence 99998 44455444 378899999999999999987 699999999998653221 13655555554331 111
Q ss_pred HHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCC--CCccceeec
Q 015364 159 HKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVVQ 236 (408)
Q Consensus 159 ~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~--H~~f~~~~~ 236 (408)
.....+||||||.+||.+|..+ +.. ..+.....||..+++|+..+||||||+|.. |++++|+.+
T Consensus 142 ---~~~~~gvDILlTseWP~~v~e~-~ss----------~~~~~~~~gs~lvs~La~~lkPRYHFa~~~~v~YErePyrn 207 (528)
T KOG2476|consen 142 ---QKEFKGVDILLTSEWPADVQER-NSS----------LPESKRLCGSELVSELAAELKPRYHFAGSDGVFYEREPYRN 207 (528)
T ss_pred ---ccccCCccEEEecCCcchhhhc-ccc----------CccccCCcchHHHHHHHHhcCcceEeccCCCceeecccccc
Confidence 1235789999999999999874 111 113445789999999999999999999975 777788888
Q ss_pred c----CCCCCeeEEEeccccCC--CCCeeEEEeccC
Q 015364 237 H----GEDSPVTKFLALDKCLP--RRKFLQVFEIES 266 (408)
Q Consensus 237 ~----~~~~~~TRFlaL~k~~~--~~k~l~a~~i~~ 266 (408)
| .+.+++||||+|+++|+ |+||+|||++.+
T Consensus 208 ~~~~~~~~~h~TRFI~LA~vGN~ek~K~lYAfs~~P 243 (528)
T KOG2476|consen 208 HAALNEEAGHVTRFIALAKVGNPEKQKWLYAFSLKP 243 (528)
T ss_pred hhhhcccccceeeeeehhhcCCccccceeeeecccc
Confidence 7 56789999999999995 679999999854
No 4
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=100.00 E-value=1.4e-37 Score=278.55 Aligned_cols=144 Identities=30% Similarity=0.538 Sum_probs=124.6
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEcC
Q 015364 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (408)
Q Consensus 4 lV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~G 83 (408)
||+||+||+++++|++++++++|+| +||++|||||||+.++.. ++|.+|++|.+++|+||||++|
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~g-pFd~~ic~Gdff~~~~~~--------------~~~~~y~~g~~~~pipTyf~gg 65 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKG-PFDALLCVGDFFGDDEDD--------------EELEAYKDGSKKVPIPTYFLGG 65 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccC-CeeEEEEecCccCCccch--------------hhHHHHhcCCccCCCCEEEECC
Confidence 6999999999999999999999988 999999999999987652 5899999999999999999999
Q ss_pred CCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHHHhc
Q 015364 84 NHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQ 163 (408)
Q Consensus 84 NHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~kL~~ 163 (408)
||+
T Consensus 66 n~~----------------------------------------------------------------------------- 68 (150)
T cd07380 66 NNP----------------------------------------------------------------------------- 68 (150)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 996
Q ss_pred cCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccce--eeccCC--
Q 015364 164 IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAA--VVQHGE-- 239 (408)
Q Consensus 164 ~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~--~~~~~~-- 239 (408)
++||||||+||+||.++++... +......||+.+++|++++|||||||||.|.+|++ +.|+..
T Consensus 69 ---~~DILlTh~wP~gi~~~~~~~~----------~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~Pf~~~~~~~ 135 (150)
T cd07380 69 ---GVDILLTSEWPKGISKLSKVPF----------EETLLICGSDLIAELAKKLKPRYHFAGLEGVFYEREPYRNDSVLE 135 (150)
T ss_pred ---CCCEEECCCCchhhhhhCCCcc----------cccccCCCCHHHHHHHHHcCCCeEeecCCCceEeecCccCCCccc
Confidence 3699999999999987665421 23446789999999999999999999999877664 666531
Q ss_pred --CCCeeEEEecccc
Q 015364 240 --DSPVTKFLALDKC 252 (408)
Q Consensus 240 --~~~~TRFlaL~k~ 252 (408)
..++||||+||++
T Consensus 136 ~~~~~~TRFi~La~~ 150 (150)
T cd07380 136 EKAEHVTRFIGLAPV 150 (150)
T ss_pred cccCcceeEEeccCC
Confidence 3679999999974
No 5
>PF05011 DBR1: Lariat debranching enzyme, C-terminal domain; InterPro: IPR007708 This presumed domain is found at the C terminus of lariat debranching enzyme. This domain is always found in association with a metallo-phosphoesterase domain IPR004843 from INTERPRO. RNA lariat debranching enzyme is capable of digesting a variety of branched nucleic acid substrates and multicopy single-stranded DNAs. The enzyme degrades intron lariat structures during splicing. ; GO: 0016788 hydrolase activity, acting on ester bonds, 0006397 mRNA processing
Probab=100.00 E-value=1.6e-36 Score=270.16 Aligned_cols=133 Identities=38% Similarity=0.618 Sum_probs=113.4
Q ss_pred eccCCCCCeeEEEeccccCCCCCeeEEEeccCCCCC--ceeeeCHHHHHHHHHhCCCCCCCCCCCCCCCC-------CCC
Q 015364 235 VQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGP--YEIQYDEEWLAITRTFNSVFPLTSQSANFGGV-------QHD 305 (408)
Q Consensus 235 ~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~~~~~--~~l~~d~ewl~i~~~~~~~~~~~~~~~~~~~~-------~~~ 305 (408)
|+|+.+++.|||||||||+|+|+|||+++|+..... .+|+||+|||||+|+++++++++.....++.. +..
T Consensus 1 vph~~~~~~TkFLALDKClP~R~FLqviei~~~~~~~~~~L~yD~EWLAI~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (145)
T PF05011_consen 1 VPHEITNKTTKFLALDKCLPRRDFLQVIEIPPDSSSPSPELYYDPEWLAILRATHHLLSLSSDPEYMPPPDEGRWDYRPL 80 (145)
T ss_pred CCCCcCCCccEEEeccccCCCCcceEEEEecCCCCCCCceEEECHHHHHHHHHhhhccccccccccCCCccccccchhhh
Confidence 456667789999999999999999999999887654 89999999999999999999987765555432 345
Q ss_pred chhHHHHHHHHhh--hCCCCCCCceEecCCCCCCCcC-ccCCCCCCCCChhHHHHHHHcCCCccc
Q 015364 306 MNDCRQWVRSRLQ--ERGAKPFEFVRTVPCYDASQSL-SIGAFAENPQNPQTESFLQFLELPNLF 367 (408)
Q Consensus 306 ~~~~~~~~~~~~~--~~~~~~~~f~~~~p~~~~~~~~-~~~~~~~~~~n~qt~~~~~~l~~~~~~ 367 (408)
++++++||++++. ++..+|.||++|||+|+++... ....+|.+|+||||++||+||||+|+|
T Consensus 81 i~ee~~~V~e~i~~~~~l~IP~nF~~tap~~~~~~~~~~~~~~~~~~~NPQT~~fc~~Lgi~n~~ 145 (145)
T PF05011_consen 81 IEEELEWVEENIVKKGDLKIPQNFVQTAPPYDPNNPQNRVNEQPKEYPNPQTTEFCELLGIPNPF 145 (145)
T ss_pred HHHHHHHHHHHhccCCCceeCcceEECCCCcCcCccccccccCCCCccChHHHHHHHHhCCCCCC
Confidence 7899999999994 4556799999999999998744 335689999999999999999999986
No 6
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.88 E-value=5.4e-21 Score=181.97 Aligned_cols=207 Identities=16% Similarity=0.224 Sum_probs=134.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|||++++|+||++.++-+.++.+. +. .+|++|+|||+...... |. +..+|.+.+ ...++|+++
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~-~~--~~D~vv~~GDl~~~g~~--------~~---~~~~~l~~l---~~l~~pv~~ 67 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAP-ET--GADAIVLIGNLLPKAAK--------SE---DYAAFFRIL---GEAHLPTFY 67 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHh-hc--CCCEEEECCCCCCCCCC--------HH---HHHHHHHHH---HhcCCceEE
Confidence 799999999999988766554332 22 59999999999875311 11 122333333 345679999
Q ss_pred EcCCCCCh--hhHHHHhhCCccCCceEEecCceEEEECC-EEEEeecccCCCcccCCCCCCCCCCChhhhh---hhhccc
Q 015364 81 IGGNHEAS--NYLWELYYGGWAAPNIYFLGFAGVVKFGN-IRIGGLSGIYNARHYRLGHYERPPYNESTIR---SVYHVR 154 (408)
Q Consensus 81 I~GNHE~~--~~l~el~~gg~va~NI~yLg~~gv~~i~G-lrIaGlsGi~~~~~y~~~~~e~~Py~~~~ir---s~yh~r 154 (408)
|+||||.. .++.+....+.+.|++..|.. +++.+.| ++|+|++|.... ...++++++. .++ .
T Consensus 68 V~GNhD~~v~~~l~~~~~~~~~~p~~~~lh~-~~~~~~g~~~~~GlGGs~~~---------~~e~sE~e~~~~~~~~--~ 135 (224)
T cd07388 68 VPGPQDAPLWEYLREAYNAELVHPEIRNVHE-TFAFWRGPYLVAGVGGEIAD---------EGEPEEHEALRYPAWV--A 135 (224)
T ss_pred EcCCCChHHHHHHHHHhcccccCccceecCC-CeEEecCCeEEEEecCCcCC---------CCCcCHHHHhhhhhhH--H
Confidence 99999986 233322222345566666644 5777855 999999998531 1123454421 110 0
Q ss_pred hHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCcccee
Q 015364 155 EYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (408)
Q Consensus 155 e~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~ 234 (408)
+.-+..+.......||||||.+|.|+-. .+.||+++++++++.||++|+|||+|...+.
T Consensus 136 ~~~l~~~~~~~~~~~VLv~H~PP~g~g~--------------------~h~GS~alr~~I~~~~P~l~i~GHih~~~~~- 194 (224)
T cd07388 136 EYRLKALWELKDYRKVFLFHTPPYHKGL--------------------NEQGSHEVAHLIKTHNPLVVLVGGKGQKHEL- 194 (224)
T ss_pred HHHHHHHHhCCCCCeEEEECCCCCCCCC--------------------CccCHHHHHHHHHHhCCCEEEEcCCceeEEE-
Confidence 1112334344567999999999999721 2589999999999999999999999944432
Q ss_pred eccCCCCCeeEEEeccccCCCCCeeEEEecc
Q 015364 235 VQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (408)
Q Consensus 235 ~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~ 265 (408)
-..|.++|-+....+ +.-.++++
T Consensus 195 ------~g~t~vvNpg~~~~g--~~a~i~~~ 217 (224)
T cd07388 195 ------LGASWVVVPGDLSEG--RYALLDLR 217 (224)
T ss_pred ------eCCEEEECCCcccCC--cEEEEEec
Confidence 235899998884444 23355654
No 7
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.85 E-value=4.3e-20 Score=167.46 Aligned_cols=186 Identities=18% Similarity=0.220 Sum_probs=120.3
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEc
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~ 82 (408)
|+++||+||+..++.. ..++ . .++|+||++||+........ |..+ +. ....++|+++|+
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~--~-~~~D~vv~~GDl~~~~~~~~---------~~~~----~~---l~~~~~p~~~v~ 59 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILK--A-EEADAVIVAGDITNFGGKEA---------AVEI----NL---LLAIGVPVLAVP 59 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhh--c-cCCCEEEECCCccCcCCHHH---------HHHH----HH---HHhcCCCEEEEc
Confidence 7899999999987754 2222 1 26999999999986433211 2111 23 345678999999
Q ss_pred CCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHHHh
Q 015364 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (408)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~kL~ 162 (408)
||||....... ..+++..+. ..++.++|++|.|++|.... .+.. ...++++++..+ ..+.
T Consensus 60 GNHD~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~-~~~~----~~~~~~~~l~~~--------~~l~ 119 (188)
T cd07392 60 GNCDTPEILGL------LTSAGLNLH-GKVVEVGGYTFVGIGGSNPT-PFNT----PIELSEEEIVSD--------GRLN 119 (188)
T ss_pred CCCCCHHHHHh------hhcCcEecC-CCEEEECCEEEEEeCCCCCC-CCCC----ccccCHHHHHHh--------hhhh
Confidence 99998654333 223444443 46677899999999886421 1110 112333333321 1233
Q ss_pred ccCCCccEEEeCCCCCCC-ccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCC
Q 015364 163 QIEEPIDIFLSHDWPCGI-TDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDS 241 (408)
Q Consensus 163 ~~~~~vDILLTHdwP~gI-~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~~~~~ 241 (408)
....+.+|++||.||.+. .+.-. .....|++.+.+++++.+|++|||||.|..+....-
T Consensus 120 ~~~~~~~ilv~H~pp~~~~~d~~~---------------~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~~~~~----- 179 (188)
T cd07392 120 NLLAKNLILVTHAPPYGTAVDRVS---------------GGFHVGSKAIRKFIEERQPLLCICGHIHESRGVDKI----- 179 (188)
T ss_pred ccCCCCeEEEECCCCcCCcccccC---------------CCCccCCHHHHHHHHHhCCcEEEEeccccccceeee-----
Confidence 445678999999999884 32110 112479999999999999999999999998854221
Q ss_pred CeeEEEec
Q 015364 242 PVTKFLAL 249 (408)
Q Consensus 242 ~~TRFlaL 249 (408)
..|.+++.
T Consensus 180 ~~~~~~n~ 187 (188)
T cd07392 180 GNTLVVNP 187 (188)
T ss_pred CCeEEecC
Confidence 24787764
No 8
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.78 E-value=2.3e-17 Score=155.05 Aligned_cols=209 Identities=22% Similarity=0.287 Sum_probs=136.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCcc--ccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQ--AVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~--~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt 78 (408)
|||+.+.|+||+.+.+-+.+..... ..+|+|+++||+. ..++..... ... ...-++...+|+
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~---~~~D~lviaGDlt~~~~~~~~~~~-----------~~~--~~e~l~~~~~~v 67 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAAD---IRADLLVIAGDLTYFHFGPKEVAE-----------ELN--KLEALKELGIPV 67 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhh---ccCCEEEEecceehhhcCchHHHH-----------hhh--HHHHHHhcCCeE
Confidence 8999999999999877665544332 2699999999998 433322111 110 011134456799
Q ss_pred EEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHH
Q 015364 79 IFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV 158 (408)
Q Consensus 79 ~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv 158 (408)
++++||.|.......+...| -|++ ..+++++|+.|.|++|+-. ..|.+ ...|+++++.+. +
T Consensus 68 ~avpGNcD~~~v~~~l~~~~---~~v~----~~v~~i~~~~~~G~Ggsn~-tp~nt----~~e~~E~~I~s~-------l 128 (226)
T COG2129 68 LAVPGNCDPPEVIDVLKNAG---VNVH----GRVVEIGGYGFVGFGGSNP-TPFNT----PREFSEDEIYSK-------L 128 (226)
T ss_pred EEEcCCCChHHHHHHHHhcc---cccc----cceEEecCcEEEEecccCC-CCCCC----ccccCHHHHHHH-------H
Confidence 99999999886666654433 2332 3788999999999988742 33322 123556655543 2
Q ss_pred HHHh-ccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeecc
Q 015364 159 HKLM-QIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH 237 (408)
Q Consensus 159 ~kL~-~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~ 237 (408)
.++. .....+-|++||.+|.|...- .. ....++||.+++++++++||+.++|||+|....--.
T Consensus 129 ~~~v~~~~~~~~Il~~HaPP~gt~~d-~~-------------~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-- 192 (226)
T COG2129 129 KSLVKKADNPVNILLTHAPPYGTLLD-TP-------------SGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-- 192 (226)
T ss_pred HHHHhcccCcceEEEecCCCCCcccc-CC-------------CCccccchHHHHHHHHHhCCceEEEeeecccccccc--
Confidence 2222 222222399999999997652 10 012489999999999999999999999998554322
Q ss_pred CCCCCeeEEEeccccCCCCCeeEEEecc
Q 015364 238 GEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (408)
Q Consensus 238 ~~~~~~TRFlaL~k~~~~~k~l~a~~i~ 265 (408)
-..|.|++-+. .++.....++++
T Consensus 193 ---iG~TivVNPG~--~~~g~yA~i~l~ 215 (226)
T COG2129 193 ---IGNTIVVNPGP--LGEGRYALIELE 215 (226)
T ss_pred ---cCCeEEECCCC--ccCceEEEEEec
Confidence 23699999998 333344445553
No 9
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.67 E-value=8.4e-16 Score=144.57 Aligned_cols=211 Identities=18% Similarity=0.274 Sum_probs=122.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcc-hhc----cccchhh--------hH--hhhHHHH
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNEN-DME----SLNVPRK--------YR--EMKSFWK 66 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~-dl~----~l~~p~k--------~~--~l~dF~~ 66 (408)
|||.++|.||+++.+-+.+..+..+ .+|+|+.+||+-...... +.. .-..|.| |. .+..|.+
T Consensus 7 kilA~s~~~g~~e~l~~l~~~~~e~---~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~ 83 (255)
T PF14582_consen 7 KILAISNFRGDFELLERLVEVIPEK---GPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFR 83 (255)
T ss_dssp EEEEEE--TT-HHHHHHHHHHHHHH---T-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHH
T ss_pred hheeecCcchHHHHHHHHHhhcccc---CCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHH
Confidence 7999999999999998888777765 489999999995432111 110 0011211 11 1234444
Q ss_pred HhhCCCCCCccEEEEcCCCCCh--hhHHHHhhCCccCCceEEecCceEEEECC-EEEEeecccCCCcccCCCCCCCCCCC
Q 015364 67 YYSGQEVAPIPTIFIGGNHEAS--NYLWELYYGGWAAPNIYFLGFAGVVKFGN-IRIGGLSGIYNARHYRLGHYERPPYN 143 (408)
Q Consensus 67 y~~g~~~~pvpt~fI~GNHE~~--~~l~el~~gg~va~NI~yLg~~gv~~i~G-lrIaGlsGi~~~~~y~~~~~e~~Py~ 143 (408)
. +..+++||++||||||++ .++.+.+....+.||++-+ +.+++.++| +-|+|+||............-++|++
T Consensus 84 ~---L~~~~~p~~~vPG~~Dap~~~~lr~a~~~e~v~p~~~~v-H~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP~w 159 (255)
T PF14582_consen 84 I---LGELGVPVFVVPGNMDAPERFFLREAYNAEIVTPHIHNV-HESFFFWKGEYLVAGMGGEITDDQREEEFKLRYPAW 159 (255)
T ss_dssp H---HHCC-SEEEEE--TTS-SHHHHHHHHHHCCCC-TTEEE--CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEEHH
T ss_pred H---HHhcCCcEEEecCCCCchHHHHHHHHhccceeccceeee-eeeecccCCcEEEEecCccccCCCccccccccchHH
Confidence 4 577889999999999996 5566666667789999877 457778887 99999999876433222111233443
Q ss_pred hhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEE
Q 015364 144 ESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWF 223 (408)
Q Consensus 144 ~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~F 223 (408)
+ . ++.++.|..++..--|||.|.+|. ... ...+.||..+++|++..+|+..+
T Consensus 160 e----a-----ey~lk~l~elk~~r~IlLfhtpPd--~~k-----------------g~~h~GS~~V~dlIk~~~P~ivl 211 (255)
T PF14582_consen 160 E----A-----EYSLKFLRELKDYRKILLFHTPPD--LHK-----------------GLIHVGSAAVRDLIKTYNPDIVL 211 (255)
T ss_dssp H----H-----HHHHGGGGGCTSSEEEEEESS-BT--BCT-----------------CTBTTSBHHHHHHHHHH--SEEE
T ss_pred H----H-----HHHHHHHHhcccccEEEEEecCCc--cCC-----------------CcccccHHHHHHHHHhcCCcEEE
Confidence 1 1 222333444556678999999991 111 12579999999999999999999
Q ss_pred EcCCCCccceeeccCCCCCeeEEEecccc
Q 015364 224 SAHLHCKFAAVVQHGEDSPVTKFLALDKC 252 (408)
Q Consensus 224 sGH~H~~f~~~~~~~~~~~~TRFlaL~k~ 252 (408)
|||.|.+.+.-.-. .|-.++-+..
T Consensus 212 ~Ghihe~~~~e~lG-----~TlVVNPGsL 235 (255)
T PF14582_consen 212 CGHIHESHGKESLG-----KTLVVNPGSL 235 (255)
T ss_dssp E-SSS-EE--EEET-----TEEEEE--BG
T ss_pred ecccccchhhHHhC-----CEEEecCccc
Confidence 99999887443221 3666655543
No 10
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.59 E-value=1.9e-14 Score=138.03 Aligned_cols=210 Identities=20% Similarity=0.246 Sum_probs=117.2
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
+||+++||+||++.... ++.+++ .++|++|++||+... .. ++.+.+ ...+.|+++
T Consensus 1 ~rIa~isDiHg~~~~~~--~~~l~~---~~pD~Vl~~GDi~~~-~~----------------~~~~~l---~~l~~p~~~ 55 (238)
T cd07397 1 LRIAIVGDVHGQWDLED--IKALHL---LQPDLVLFVGDFGNE-SV----------------QLVRAI---SSLPLPKAV 55 (238)
T ss_pred CEEEEEecCCCCchHHH--HHHHhc---cCCCEEEECCCCCcC-hH----------------HHHHHH---HhCCCCeEE
Confidence 59999999999976522 233332 258999999999632 10 122332 334678999
Q ss_pred EcCCCCChhhHHHHhhCCccCCceE-----EecCceEEEEC--CEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhcc
Q 015364 81 IGGNHEASNYLWELYYGGWAAPNIY-----FLGFAGVVKFG--NIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHV 153 (408)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~-----yLg~~gv~~i~--GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~ 153 (408)
|.||||............++.+.+. +++. +.+.+. ++.|.|.=|...+..+ -.+...+|..|.+
T Consensus 56 V~GNHD~~~~~~~~~k~~~l~~~L~~lg~~~l~~-~~~~~~~~~~~vvG~R~~~~~g~~--------~~~~~~vr~~fgi 126 (238)
T cd07397 56 ILGNHDAWYDATFRKKGDRVQEQLELLGDLHCGW-GRLDFPPLPLSVVGGRPFSAGGGF--------WLSKKAVKAVYGV 126 (238)
T ss_pred EcCCCcccccccccchHHHHHHHHHHhCCcEEee-cccccCCCCeEEEeeCCccCCCcc--------ccCHHHHHHHhCC
Confidence 9999996321000000011111222 2322 223443 4666554332211111 1233467777755
Q ss_pred chHH--H----HHHhc-cCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhc-ccCCCCChHHHHHHHHHhC----CCE
Q 015364 154 REYD--V----HKLMQ-IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKE-IQDGTLGSEPAAQLLEKLK----PSY 221 (408)
Q Consensus 154 re~d--v----~kL~~-~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~d-i~~~~lGS~~l~~Ll~~lk----Pry 221 (408)
+..+ + +.+.. .....+|||||..|.|.-+..+. +.=++- ......|++-+++.+..++ |+|
T Consensus 127 ~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G~g~~~~~-------~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l 199 (238)
T cd07397 127 ISLEESAQRIIAAAKKAPPDLPLILLAHNGPSGLGSDAED-------PCGRDWKPPGGDWGDPDLALAISQIQQGRQVPL 199 (238)
T ss_pred CCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcCCCccccc-------ccccccCCcCCCCCCHHHHHHHHHHhccCCCCE
Confidence 4443 2 22211 23457999999999998642210 000000 0235789999999999888 899
Q ss_pred EEEcCCCCc--cceee---ccCCCCCeeEEEecccc
Q 015364 222 WFSAHLHCK--FAAVV---QHGEDSPVTKFLALDKC 252 (408)
Q Consensus 222 ~FsGH~H~~--f~~~~---~~~~~~~~TRFlaL~k~ 252 (408)
|++||+|.. +..-. .+ .....|.|||-+.+
T Consensus 200 ~~fGH~H~~l~~~~~~r~~~~-~~~~gt~y~N~a~~ 234 (238)
T cd07397 200 VVFGHMHHRLRRGKGLRNMIA-VDREGTVYLNAASV 234 (238)
T ss_pred EEeCCccCcccccccccceee-ecCCCeEEEecccc
Confidence 999999977 44310 01 11246999998865
No 11
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.54 E-value=1.1e-13 Score=120.95 Aligned_cols=135 Identities=22% Similarity=0.345 Sum_probs=93.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEE
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI 81 (408)
||+++||+||... .+ +..++|++|+|||+....... +...+.+++.... .+ ++++|
T Consensus 1 ~i~~isD~H~~~~----~~------~~~~~D~vi~~GD~~~~~~~~------------~~~~~~~~l~~~~-~~-~~~~v 56 (135)
T cd07379 1 RFVCISDTHSRHR----TI------SIPDGDVLIHAGDLTERGTLE------------ELQKFLDWLKSLP-HP-HKIVI 56 (135)
T ss_pred CEEEEeCCCCCCC----cC------cCCCCCEEEECCCCCCCCCHH------------HHHHHHHHHHhCC-CC-eEEEE
Confidence 6999999999976 11 113689999999997543211 2234455543332 22 25789
Q ss_pred cCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHHH
Q 015364 82 GGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKL 161 (408)
Q Consensus 82 ~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~kL 161 (408)
.||||....
T Consensus 57 ~GNHD~~~~----------------------------------------------------------------------- 65 (135)
T cd07379 57 AGNHDLTLD----------------------------------------------------------------------- 65 (135)
T ss_pred ECCCCCcCC-----------------------------------------------------------------------
Confidence 999984200
Q ss_pred hccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCC
Q 015364 162 MQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDS 241 (408)
Q Consensus 162 ~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~~~~~ 241 (408)
..+++|++||.+|.++.++.. .....|+..+.+++.+.+|+++|+||+|..+.....+ ...
T Consensus 66 ---~~~~~ilv~H~~p~~~~~~~~---------------~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~-~~~ 126 (135)
T cd07379 66 ---PEDTDILVTHGPPYGHLDLVS---------------SGQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAERVL-DTD 126 (135)
T ss_pred ---CCCCEEEEECCCCCcCccccc---------------cCcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeEec-ccC
Confidence 024689999999998765432 1246899999999999999999999999998664213 222
Q ss_pred CeeEEEecc
Q 015364 242 PVTKFLALD 250 (408)
Q Consensus 242 ~~TRFlaL~ 250 (408)
..|.||+.+
T Consensus 127 ~~t~~in~~ 135 (135)
T cd07379 127 GETLFVNAS 135 (135)
T ss_pred CCEEEEeCC
Confidence 479998854
No 12
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=99.50 E-value=2.2e-13 Score=130.94 Aligned_cols=207 Identities=22% Similarity=0.311 Sum_probs=136.0
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCc-cEEE
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI-PTIF 80 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pv-pt~f 80 (408)
|..+++|.|+....+- .+ ..-|++|.+|||....-. +++..|.+++ .+.|. -.++
T Consensus 63 r~VcisdtH~~~~~i~-~~--------p~gDvlihagdfT~~g~~------------~ev~~fn~~~---gslph~yKIV 118 (305)
T KOG3947|consen 63 RFVCISDTHELTFDIN-DI--------PDGDVLIHAGDFTNLGLP------------EEVIKFNEWL---GSLPHEYKIV 118 (305)
T ss_pred EEEEecCcccccCccc-cC--------CCCceEEeccCCccccCH------------HHHHhhhHHh---ccCcceeeEE
Confidence 7889999999876654 11 257999999999875422 2345566653 22222 3589
Q ss_pred EcCCCCCh---hhHH---H-----Hh-----------hCC--ccCCceEEecCceEEEECCEEEEeecccCCCcccCCCC
Q 015364 81 IGGNHEAS---NYLW---E-----LY-----------YGG--WAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGH 136 (408)
Q Consensus 81 I~GNHE~~---~~l~---e-----l~-----------~gg--~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~ 136 (408)
|.||||.. ..+. + ++ ++| .+-.|..||.+..| ++.|+||-|.+.. +.
T Consensus 119 IaGNHELtFd~ef~~~~~k~~~~~~~~p~~s~l~P~a~egv~~lLTN~iYLqD~~v-tv~G~~Iygspw~--p~------ 189 (305)
T KOG3947|consen 119 IAGNHELTFDHEFMADLIKDEQDAYYFPGVSKLKPEAYEGVQSLLTNCIYLQDSEV-TVRGVRIYGSPWT--PL------ 189 (305)
T ss_pred EeeccceeecccccchhhccccceecCccccccCccccccccchhceeEEEecCcE-EEEEEEEecCCCC--cc------
Confidence 99999975 1111 1 00 122 25678999999884 7889999886432 10
Q ss_pred CCCCCCChhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChH-HHHHHHH
Q 015364 137 YERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSE-PAAQLLE 215 (408)
Q Consensus 137 ~e~~Py~~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~-~l~~Ll~ 215 (408)
+.+++|+.. .++..+.+..++...+|||+||.+|.| +++... . .+..+.|+. .+..+-.
T Consensus 190 ~~g~~f~l~-------rg~~~ld~W~~ip~~iDvL~tHtPPlG---~gd~~~------~----~~gqr~GC~ell~tVe~ 249 (305)
T KOG3947|consen 190 LPGWAFNLP-------RGQSLLDKWNQIPGGIDVLITHTPPLG---HGDLVP------V----FSGQRNGCVELLNTVER 249 (305)
T ss_pred cCchhhhhh-------hhHhhhHHHhcCccccceeccCCCCCC---cchhcc------c----ccCcccCHHHHHHhHhh
Confidence 012222211 134556788899999999999999999 444321 0 134578885 5566666
Q ss_pred HhCCCEEEEcCCCCccceeeccCCCCCeeEEEeccccCC----CCCeeEEEeccCC
Q 015364 216 KLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLP----RRKFLQVFEIESG 267 (408)
Q Consensus 216 ~lkPry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~k~~~----~~k~l~a~~i~~~ 267 (408)
++||+||++||.|..|..... ..|+|++-.-|.- ..+=+ +|+|+..
T Consensus 250 rvqpk~hVfGhvhe~~Gvta~-----G~t~fina~~C~~~~~~t~~pi-lfdip~~ 299 (305)
T KOG3947|consen 250 RVQPKYHVFGHVHEGHGVTAD-----GYTTFINAELCNINLRPTNKPI-LFDIPKP 299 (305)
T ss_pred ccccceEEeeeeecCceeeec-----CccccccHHHhhhccccCCCCe-EEeCCCC
Confidence 699999999999999988764 3699998888862 22222 6777543
No 13
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.43 E-value=8.4e-12 Score=118.18 Aligned_cols=195 Identities=16% Similarity=0.203 Sum_probs=113.2
Q ss_pred EEEEEcCCCCCh------------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhh
Q 015364 2 RIAVEGCMHGEL------------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (408)
Q Consensus 2 KIlV~GD~HG~l------------d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~ 69 (408)
||++++|+|-.- ..+-+.++.+++... ++|+||++||+...... ..|+. |.+.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~-~~d~vi~~GDl~~~~~~---------~~~~~---~~~~l- 66 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHP-RPDLVLVTGDLTDDGSP---------ESYER---LRELL- 66 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCC-CCCEEEECccCCCCCCH---------HHHHH---HHHHH-
Confidence 799999999442 233334455544332 69999999999865332 12322 33333
Q ss_pred CCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhh
Q 015364 70 GQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRS 149 (408)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs 149 (408)
.+..+|+++|+||||....+.+.. +.+-..+- ....++.++|++|.++.+...... ...+.+.+++-
T Consensus 67 --~~~~~p~~~v~GNHD~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~i~lds~~~~~~-------~~~~~~~ql~w 133 (240)
T cd07402 67 --AALPIPVYLLPGNHDDRAAMRAVF-PELPPAPG---FVQYVVDLGGWRLILLDSSVPGQH-------GGELCAAQLDW 133 (240)
T ss_pred --hhcCCCEEEeCCCCCCHHHHHHhh-cccccccc---ccceeEecCCEEEEEEeCCCCCCc-------CCEECHHHHHH
Confidence 234689999999999865433322 11100000 112345779999999876542110 01122333322
Q ss_pred hhccchHHHHHHhccCCCccEEEeCCCCCCCcc-CCchhhhhhhcchhhhcccCCCCChHHHHHHHHHh-CCCEEEEcCC
Q 015364 150 VYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHL 227 (408)
Q Consensus 150 ~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~-~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~l-kPry~FsGH~ 227 (408)
+ .+.|.+.....-|+++|.+|..... ..+ .....++..+.+++.+. +++++||||.
T Consensus 134 L-------~~~L~~~~~~~~il~~H~pp~~~~~~~~~---------------~~~~~~~~~~~~~l~~~~~v~~v~~GH~ 191 (240)
T cd07402 134 L-------EAALAEAPDKPTLVFLHHPPFPVGIAWMD---------------AIGLRNAEALAAVLARHPNVRAILCGHV 191 (240)
T ss_pred H-------HHHHHhCCCCCEEEEECCCCccCCchhhh---------------hhhCCCHHHHHHHHhcCCCeeEEEECCc
Confidence 2 1123333346789999999977532 111 01234578888999998 8899999999
Q ss_pred CCccceeeccCCCCCeeEEEeccc
Q 015364 228 HCKFAAVVQHGEDSPVTKFLALDK 251 (408)
Q Consensus 228 H~~f~~~~~~~~~~~~TRFlaL~k 251 (408)
|..+...+. .+.++..+.
T Consensus 192 H~~~~~~~~------g~~~~~~gs 209 (240)
T cd07402 192 HRPIDGSWG------GIPLLTAPS 209 (240)
T ss_pred CchHHeEEC------CEEEEEcCc
Confidence 986555442 356655554
No 14
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.41 E-value=1.1e-12 Score=112.07 Aligned_cols=188 Identities=22% Similarity=0.300 Sum_probs=97.9
Q ss_pred CEEEEEcCCCCChHHH---HHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCcc
Q 015364 1 MRIAVEGCMHGELDNV---YKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP 77 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i---~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvp 77 (408)
|||+++||+|+..... ...+.....+. +.|++|++||+.......+.. ...+. ........++|
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~--~~d~ii~~GD~~~~~~~~~~~----------~~~~~-~~~~~~~~~~~ 67 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAEN--KPDFIIFLGDLVDGGNPSEEW----------RAQFW-FFIRLLNPKIP 67 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHT--TTSEEEEESTSSSSSSHHHHH----------HHHHH-HHHHHHHTTTT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccC--CCCEEEeeccccccccccccc----------hhhhc-cchhhhhcccc
Confidence 8999999999998876 33333333333 699999999998765443211 11110 01112345679
Q ss_pred EEEEcCCCCChhhHHHHhh-----CC-ccCCceEEecCce-EE-EECCEEEEeecccCCCcccCCCCCCCCCCChhhhhh
Q 015364 78 TIFIGGNHEASNYLWELYY-----GG-WAAPNIYFLGFAG-VV-KFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRS 149 (408)
Q Consensus 78 t~fI~GNHE~~~~l~el~~-----gg-~va~NI~yLg~~g-v~-~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs 149 (408)
++++.||||.......... .. ....+..+....+ .. ...........+... .........
T Consensus 68 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 135 (200)
T PF00149_consen 68 VYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYP------------DYGMEAQQE 135 (200)
T ss_dssp EEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTH------------HSEHHHHHH
T ss_pred ccccccccccceeccccccccccccccccccccccccCcceeeeccccccccccccccc------------ccccccchh
Confidence 9999999999754332210 00 1111111111111 00 011111111111100 000000110
Q ss_pred hhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCC
Q 015364 150 VYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHC 229 (408)
Q Consensus 150 ~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~ 229 (408)
. .......+..-.....|+++|.+|.......... .....++..+..+++..++.++|+||.|.
T Consensus 136 ~---~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 136 W---WLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSY-------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp H---HHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHH-------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred c---ccccccccccccccceeEEEecCCCCcccccccc-------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 0 0111122223335788999999999876533210 11234677899999999999999999996
No 15
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.41 E-value=4.8e-12 Score=121.01 Aligned_cols=208 Identities=22% Similarity=0.249 Sum_probs=112.5
Q ss_pred EEEEEcCCCCChHH------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCC
Q 015364 2 RIAVEGCMHGELDN------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAP 75 (408)
Q Consensus 2 KIlV~GD~HG~ld~------i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~p 75 (408)
||++++|+|+++.. +.+.++.+++ .++|+||++||+..... ..+.-+..+.+. ..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~---~~~d~vv~~GDl~~~~~----------~~~~~~~~l~~~------~~ 61 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKK---QKIDHLHIAGDISNDFQ----------RSLPFIEKLQEL------KG 61 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHh---cCCCEEEECCccccchh----------hHHHHHHHHHHh------cC
Confidence 79999999976421 2222333333 25999999999986321 111222222221 34
Q ss_pred ccEEEEcCCCCCh-h-hHHHHhhCCccCCceEEecCceEE-EECCEEEEeecccCCCcccCC----------------CC
Q 015364 76 IPTIFIGGNHEAS-N-YLWELYYGGWAAPNIYFLGFAGVV-KFGNIRIGGLSGIYNARHYRL----------------GH 136 (408)
Q Consensus 76 vpt~fI~GNHE~~-~-~l~el~~gg~va~NI~yLg~~gv~-~i~GlrIaGlsGi~~~~~y~~----------------~~ 136 (408)
+|+++|+||||.. . ...++.. .. ++.+|....+. ..+++||.|+.|.+.. .+.. ..
T Consensus 62 ~pv~~v~GNHD~~~~~~~~~~~~--~~--~~~~l~~~~~~~~~~~~~~ig~~gw~d~-~~~~~~~~~~~~~~~~d~~~~~ 136 (239)
T TIGR03729 62 IKVTFNAGNHDMLKDLTYEEIES--ND--SPLYLHNRFIDIPNTQWRIIGNNGWYDY-SFSNDKTSKEILRWKKSFWFDR 136 (239)
T ss_pred CcEEEECCCCCCCCCCCHHHHHh--cc--chhhhcccccccCCCceEEEeeccceec-ccccccCHHHHHHhhhcEEeec
Confidence 7999999999963 1 1122211 11 34456544432 2388999999986531 1100 00
Q ss_pred CCCCCCChhhhhhhhccchHH-H-HHHhccCCCccEEEeCCCCCCCccC-CchhhhhhhcchhhhcccCCCCChHHHHHH
Q 015364 137 YERPPYNESTIRSVYHVREYD-V-HKLMQIEEPIDIFLSHDWPCGITDY-GNCKELVRHKQYFEKEIQDGTLGSEPAAQL 213 (408)
Q Consensus 137 ~e~~Py~~~~irs~yh~re~d-v-~kL~~~~~~vDILLTHdwP~gI~~~-g~~~~L~~~kp~f~~di~~~~lGS~~l~~L 213 (408)
....|..... + +-++.+ + +.|.+...+.-|++||-+|...... +... +.+ .......||..+.++
T Consensus 137 ~~~~~~~~~~---~-~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~~~~~~~------~~~--~~~~~~~~s~~l~~l 204 (239)
T TIGR03729 137 RIKRPMSDPE---R-TAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFIYVPMDH------RRF--DMFNAFLGSQHFGQL 204 (239)
T ss_pred ccCCCCChHH---H-HHHHHHHHHHHHHhcCCCCEEEEEcccchHHHhcCCCCC------cch--hhhhhccChHHHHHH
Confidence 0001222111 1 101111 1 2233334456899999999652110 0000 001 001235789999999
Q ss_pred HHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEecc
Q 015364 214 LEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALD 250 (408)
Q Consensus 214 l~~lkPry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~ 250 (408)
+++.+|+.|+|||.|..+..... ..||+++-.
T Consensus 205 i~~~~v~~~i~GH~H~~~~~~~i-----~~~~~~~~~ 236 (239)
T TIGR03729 205 LVKYEIKDVIFGHLHRRFGPLTI-----GGTTYHNRP 236 (239)
T ss_pred HHHhCCCEEEECCccCCCCCEEE-----CCEEEEecC
Confidence 99999999999999999853321 258888643
No 16
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.33 E-value=1.2e-11 Score=111.40 Aligned_cols=152 Identities=18% Similarity=0.169 Sum_probs=88.5
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEc
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~ 82 (408)
|+++||+|++.......+. ......++|+||++||++....... +..+ ......+.|+++|.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~--~~~~~~~~d~li~~GDi~~~~~~~~---------------~~~~-~~~~~~~~~v~~v~ 62 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLL--NFPIAPDADILVLAGDIGYLTDAPR---------------FAPL-LLALKGFEPVIYVP 62 (166)
T ss_pred CceEccccccCcccccccc--ccCCCCCCCEEEECCCCCCCcchHH---------------HHHH-HHhhcCCccEEEeC
Confidence 6899999999765433221 1112236999999999986432211 1111 11234567999999
Q ss_pred CCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHHHh
Q 015364 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (408)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~kL~ 162 (408)
||||.. ++|.|..+-+. + .++++.. +..+.
T Consensus 63 GNHD~~-----------------------------~~~~G~~~w~~---~-------~~~~~~~-----------~~~~~ 92 (166)
T cd07404 63 GNHEFY-----------------------------VRIIGTTLWSD---I-------SLFGEAA-----------ARMRM 92 (166)
T ss_pred CCcceE-----------------------------EEEEeeecccc---c-------CccchHH-----------HHhCC
Confidence 999864 45555542211 1 1122211 12222
Q ss_pred ccCCCccEEEeCCCCCCCccC-CchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCcccee
Q 015364 163 QIEEPIDIFLSHDWPCGITDY-GNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (408)
Q Consensus 163 ~~~~~vDILLTHdwP~gI~~~-g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~ 234 (408)
.-..+..|++||-+|...... .+... .....++..+.++++..++++|||||.|..+...
T Consensus 93 ~d~~~~~vv~~HhpP~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~~ 153 (166)
T cd07404 93 NDFRGKTVVVTHHAPSPLSLAPQYGDS------------LVNAAFAVDLDDLILADPIDLWIHGHTHFNFDYR 153 (166)
T ss_pred CCCCCCEEEEeCCCCCccccCccccCC------------CcchhhhhccHhHHhhcCCCEEEECCccccceEE
Confidence 222357899999999765321 01000 0012455667788888899999999999887554
No 17
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.24 E-value=5.6e-11 Score=103.73 Aligned_cols=66 Identities=21% Similarity=0.345 Sum_probs=48.4
Q ss_pred cEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEe
Q 015364 169 DIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLA 248 (408)
Q Consensus 169 DILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~~~~~~~TRFla 248 (408)
+|+++|.||.++....+ ....|++.+.+++.+.+|++++|||.|..+..... ...-..|++++
T Consensus 58 ~Ilv~H~pp~~~~~~~~----------------~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~~~-~~~~~~t~~~n 120 (129)
T cd07403 58 DILLTHAPPAGIGDGED----------------FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQLR-IRRVGDTTVIN 120 (129)
T ss_pred CEEEECCCCCcCcCccc----------------ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcccc-ccccCCEEEEe
Confidence 78999999987654211 13468899999999999999999999988765510 01123699998
Q ss_pred ccc
Q 015364 249 LDK 251 (408)
Q Consensus 249 L~k 251 (408)
.+-
T Consensus 121 ~~~ 123 (129)
T cd07403 121 AYG 123 (129)
T ss_pred CCc
Confidence 765
No 18
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.24 E-value=1.1e-10 Score=102.58 Aligned_cols=150 Identities=20% Similarity=0.258 Sum_probs=90.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|||+++||+|++.+.+-+.++.+ + ++|++|++||+... .++.+.++. + ++++
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~---~--~~d~vi~~GDi~~~------------------~~~~~~~~~---~--~~~~ 52 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI---N--EPDFVIILGDIFDP------------------EEVLELLRD---I--PVYV 52 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH---T--TESEEEEES-SCSH------------------HHHHHHHHH---H--EEEE
T ss_pred CEEEEEeCCCCChhHHHHHHHHh---c--CCCEEEECCCchhH------------------HHHHHHHhc---C--CEEE
Confidence 99999999999998766555554 2 49999999998652 122333322 2 7999
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHH
Q 015364 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK 160 (408)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~k 160 (408)
|.||||...+ .... .... +...-..+
T Consensus 53 v~GNHD~~~~-~~~~-~~~~------~~~~~~~~---------------------------------------------- 78 (156)
T PF12850_consen 53 VRGNHDNWAF-PNEN-DEEY------LLDALRLT---------------------------------------------- 78 (156)
T ss_dssp E--CCHSTHH-HSEE-CTCS------SHSEEEEE----------------------------------------------
T ss_pred EeCCcccccc-hhhh-hccc------cccceeee----------------------------------------------
Confidence 9999996541 1110 0000 00000000
Q ss_pred HhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeeccCCC
Q 015364 161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240 (408)
Q Consensus 161 L~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~~~~ 240 (408)
.....|+++|.-|..+. .+...+.+++...+++++|+||.|..+.....
T Consensus 79 ----~~~~~i~~~H~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~---- 127 (156)
T PF12850_consen 79 ----IDGFKILLSHGHPYDVQ-----------------------WDPAELREILSRENVDLVLHGHTHRPQVFKIG---- 127 (156)
T ss_dssp ----ETTEEEEEESSTSSSST-----------------------TTHHHHHHHHHHTTSSEEEESSSSSEEEEEET----
T ss_pred ----ecCCeEEEECCCCcccc-----------------------cChhhhhhhhcccCCCEEEcCCcccceEEEEC----
Confidence 13568888888776643 13345678888999999999999988775532
Q ss_pred CCeeEEEeccccCC----CCCeeEEEecc
Q 015364 241 SPVTKFLALDKCLP----RRKFLQVFEIE 265 (408)
Q Consensus 241 ~~~TRFlaL~k~~~----~~k~l~a~~i~ 265 (408)
.+.+++.+.+.. .++-.-+++++
T Consensus 128 --~~~~~~~Gs~~~~~~~~~~~~~i~~~~ 154 (156)
T PF12850_consen 128 --GIHVINPGSIGGPRHGDQSGYAILDIE 154 (156)
T ss_dssp --TEEEEEE-GSSS-SSSSSEEEEEEEET
T ss_pred --CEEEEECCcCCCCCCCCCCEEEEEEEe
Confidence 489999888763 13444455543
No 19
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.17 E-value=2.3e-09 Score=104.64 Aligned_cols=182 Identities=17% Similarity=0.205 Sum_probs=96.5
Q ss_pred CEEEEEcCCCC-C-----------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHh
Q 015364 1 MRIAVEGCMHG-E-----------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (408)
Q Consensus 1 mKIlV~GD~HG-~-----------ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~ 68 (408)
|||+.++|+|= . .+.+-+.++.+++.. .++|+||++||+...... ..|+ .|.+.+
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~-~~~D~vvitGDl~~~~~~---------~~~~---~~~~~l 81 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQ-HEFDLIVATGDLAQDHSS---------EAYQ---HFAEGI 81 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhC-CCCCEEEECCCCCCCCCH---------HHHH---HHHHHH
Confidence 79999999992 1 123334445554432 368999999999764321 1222 333333
Q ss_pred hCCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhh
Q 015364 69 SGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (408)
Q Consensus 69 ~g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~ir 148 (408)
.+.++|+|+|+||||....+.+.....-+.++ ..++..++.+|.++........ .-.+..+++.
T Consensus 82 ---~~l~~Pv~~v~GNHD~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~Lds~~~g~~-------~G~l~~~ql~ 145 (275)
T PRK11148 82 ---APLRKPCVWLPGNHDFQPAMYSALQDAGISPA------KHVLIGEHWQILLLDSQVFGVP-------HGELSEYQLE 145 (275)
T ss_pred ---hhcCCcEEEeCCCCCChHHHHHHHhhcCCCcc------ceEEecCCEEEEEecCCCCCCc-------CCEeCHHHHH
Confidence 34567999999999985444332211101111 1122234577777765432110 0112333332
Q ss_pred hhhccchHHHHHHhccCCCccEEEeCCCCC--CCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHh-CCCEEEEc
Q 015364 149 SVYHVREYDVHKLMQIEEPIDIFLSHDWPC--GITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSA 225 (408)
Q Consensus 149 s~yh~re~dv~kL~~~~~~vDILLTHdwP~--gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~l-kPry~FsG 225 (408)
-+ -+.|.+...+.-|++.|-.|- +.. +.+. .....+..+.+++++. +.+.+|||
T Consensus 146 wL-------~~~L~~~~~~~~vv~~hH~P~~~~~~-~~d~---------------~~l~n~~~l~~ll~~~~~v~~vl~G 202 (275)
T PRK11148 146 WL-------ERKLADAPERHTLVLLHHHPLPAGCA-WLDQ---------------HSLRNAHELAEVLAKFPNVKAILCG 202 (275)
T ss_pred HH-------HHHHhhCCCCCeEEEEcCCCCCCCcc-hhhc---------------cCCCCHHHHHHHHhcCCCceEEEec
Confidence 22 112333333333455554443 321 1110 1223567889999887 78999999
Q ss_pred CCCCcccee
Q 015364 226 HLHCKFAAV 234 (408)
Q Consensus 226 H~H~~f~~~ 234 (408)
|.|..+...
T Consensus 203 H~H~~~~~~ 211 (275)
T PRK11148 203 HIHQELDLD 211 (275)
T ss_pred ccChHHhce
Confidence 999876543
No 20
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.12 E-value=1.2e-09 Score=97.88 Aligned_cols=64 Identities=25% Similarity=0.408 Sum_probs=42.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|||+|+||+||+...+-..++.++ ... ++|++|+|||+... ++.+++ .+...|+++
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~-~~~-~~d~ii~~GD~~~~-------------------~~~~~l---~~~~~~~~~ 56 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFN-LES-NVDLVIHAGDLTSP-------------------FVLKEF---EDLAAKVIA 56 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHh-hcc-CCCEEEEcCCCCCH-------------------HHHHHH---HHhCCceEE
Confidence 999999999999865433333333 221 58999999999721 112222 122347899
Q ss_pred EcCCCCCh
Q 015364 81 IGGNHEAS 88 (408)
Q Consensus 81 I~GNHE~~ 88 (408)
|.||||..
T Consensus 57 V~GN~D~~ 64 (158)
T TIGR00040 57 VRGNNDGE 64 (158)
T ss_pred EccCCCch
Confidence 99999873
No 21
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.11 E-value=5.1e-09 Score=99.98 Aligned_cols=181 Identities=22% Similarity=0.222 Sum_probs=93.2
Q ss_pred EEEEcCCCCCh---------H----HHHHHHHH-HHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHh
Q 015364 3 IAVEGCMHGEL---------D----NVYKTLQY-MENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (408)
Q Consensus 3 IlV~GD~HG~l---------d----~i~~~v~~-l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~ 68 (408)
|.+++|+|... . ...+++.. ++... .++|+||++||+....... ++....+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~-~~~D~viiaGDl~~~~~~~------------~~~~~l~~l 67 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVV-APEDIVLIPGDISWAMKLE------------EAKLDLAWI 67 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcC-CCCCEEEEcCCCccCCChH------------HHHHHHHHH
Confidence 56889999551 1 22222322 22222 2699999999997322111 111223333
Q ss_pred hCCCCCCccEEEEcCCCCCh----hhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCCh
Q 015364 69 SGQEVAPIPTIFIGGNHEAS----NYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNE 144 (408)
Q Consensus 69 ~g~~~~pvpt~fI~GNHE~~----~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~ 144 (408)
+..+.|+|+|+||||.. ..+.+. +.++..++.....+.+++++|.|+.+.... +.. ..++++
T Consensus 68 ---~~l~~~v~~V~GNHD~~~~~~~~~~~~-----l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~--~~~----~~~~~~ 133 (232)
T cd07393 68 ---DALPGTKVLLKGNHDYWWGSASKLRKA-----LEESRLALLFNNAYIDDDVAICGTRGWDNP--GNP----WPPINE 133 (232)
T ss_pred ---HhCCCCeEEEeCCccccCCCHHHHHHH-----HHhcCeEEeccCcEEECCEEEEEEEeeCCC--CCc----cccccc
Confidence 23355789999999962 222221 122223333345567899999998642211 000 000000
Q ss_pred hhh-hhhhccchHHHHH----HhccC----CCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHH
Q 015364 145 STI-RSVYHVREYDVHK----LMQIE----EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLE 215 (408)
Q Consensus 145 ~~i-rs~yh~re~dv~k----L~~~~----~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~ 215 (408)
..+ .+-.++.+.++.. |.... .++-|+++|.+|.... .++..+.++++
T Consensus 134 ~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~-----------------------~~~~~~~~~~~ 190 (232)
T cd07393 134 TLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANEN-----------------------GDDSPISKLIE 190 (232)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCC-----------------------CCHHHHHHHHH
Confidence 000 0000000111111 22211 1357999999986542 13446678888
Q ss_pred HhCCCEEEEcCCCCccce
Q 015364 216 KLKPSYWFSAHLHCKFAA 233 (408)
Q Consensus 216 ~lkPry~FsGH~H~~f~~ 233 (408)
+.+.++.|+||.|.....
T Consensus 191 ~~~v~~vl~GH~H~~~~~ 208 (232)
T cd07393 191 EYGVDICVYGHLHGVGRD 208 (232)
T ss_pred HcCCCEEEECCCCCCccc
Confidence 889999999999976543
No 22
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.11 E-value=2.9e-09 Score=94.52 Aligned_cols=59 Identities=27% Similarity=0.413 Sum_probs=42.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEE
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI 81 (408)
||+++||+||+.+.+.+.++.+ . .+|.+|+|||+........ .....++++|
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~----~-~~d~ii~~GD~~~~~~~~~-----------------------~~~~~~~~~V 52 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELF----G-DVDLIIHAGDVLYPGPLNE-----------------------LELKAPVIAV 52 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHh----c-CCCEEEECCccccccccch-----------------------hhcCCcEEEE
Confidence 7999999999987666555443 2 3899999999976432110 1123578999
Q ss_pred cCCCCCh
Q 015364 82 GGNHEAS 88 (408)
Q Consensus 82 ~GNHE~~ 88 (408)
.||||..
T Consensus 53 ~GNhD~~ 59 (155)
T cd00841 53 RGNCDGE 59 (155)
T ss_pred eCCCCCc
Confidence 9999875
No 23
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.06 E-value=1.4e-08 Score=98.81 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=60.0
Q ss_pred CEEEEEcCCC-CC------------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHH
Q 015364 1 MRIAVEGCMH-GE------------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (408)
Q Consensus 1 mKIlV~GD~H-G~------------ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y 67 (408)
.||++++|+| +. .+.+-+.++.+++. ++|++|++||+....... -++.+..+.+.
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~---~~d~vv~~GDlv~~~~~~---------~~~~~~~~~~~ 68 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE---SLDFVVQLGDIIDGDNAR---------AEEALDAVLAI 68 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC---CCCEEEECCCeecCCCch---------HHHHHHHHHHH
Confidence 4899999999 21 23333444555432 599999999997543211 11223444555
Q ss_pred hhCCCCCCccEEEEcCCCCChhhHHHHhh--CCccCCceEEecCceEEEECCEEEEeeccc
Q 015364 68 YSGQEVAPIPTIFIGGNHEASNYLWELYY--GGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (408)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~~~l~el~~--gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (408)
++ ..++|+++++||||.......... ..+.-+.-| -.+..+|.|+.++.+.
T Consensus 69 l~---~l~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~y-----ysf~~~~~~~i~lds~ 121 (267)
T cd07396 69 LD---RLKGPVHHVLGNHDLYNPSREYLLLYTLLGLGAPY-----YSFSPGGIRFIVLDGY 121 (267)
T ss_pred HH---hcCCCEEEecCccccccccHhhhhcccccCCCCce-----EEEecCCcEEEEEeCC
Confidence 43 345799999999997643221110 000001111 2345578888888764
No 24
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.03 E-value=3.1e-09 Score=88.74 Aligned_cols=119 Identities=27% Similarity=0.265 Sum_probs=79.9
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEcC
Q 015364 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (408)
Q Consensus 4 lV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~G 83 (408)
+++||+|+..............+ ..+.|+||++||+........... +.. ......+.+|++++.|
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~-~~~~~~vi~~GD~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~~~~G 66 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAA-AEKPDFVLVLGDLVGDGPDPEEVL------------AAA-LALLLLLGIPVYVVPG 66 (131)
T ss_pred CeeecccCCccchHHHHHHHHhc-ccCCCEEEECCcccCCCCCchHHH------------HHH-HHHhhcCCCCEEEeCC
Confidence 47899999987766543111222 236899999999987554332110 000 1224567789999999
Q ss_pred CCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHHHhc
Q 015364 84 NHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQ 163 (408)
Q Consensus 84 NHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~kL~~ 163 (408)
|||
T Consensus 67 NHD----------------------------------------------------------------------------- 69 (131)
T cd00838 67 NHD----------------------------------------------------------------------------- 69 (131)
T ss_pred Cce-----------------------------------------------------------------------------
Confidence 998
Q ss_pred cCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCcccee
Q 015364 164 IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (408)
Q Consensus 164 ~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~ 234 (408)
|+++|.+|......... ....+......++...+|.++|+||.|......
T Consensus 70 ------i~~~H~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 ------ILLTHGPPYDPLDELSP---------------DEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ------EEEeccCCCCCchhhcc---------------cchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 77777777665543211 011256788999999999999999999877544
No 25
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.99 E-value=8.3e-09 Score=90.34 Aligned_cols=50 Identities=18% Similarity=0.177 Sum_probs=37.0
Q ss_pred EEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceee
Q 015364 170 IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVV 235 (408)
Q Consensus 170 ILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~ 235 (408)
|+++|-+|......... ...+...+.+++.+.++++++|||.|..+....
T Consensus 81 iv~~Hhp~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 81 IVVLHHPLVPPPGSGRE----------------RLLDAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred EEEecCCCCCCCccccc----------------cCCCHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 78888888776432111 112677889999999999999999998876653
No 26
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.99 E-value=7.7e-09 Score=99.20 Aligned_cols=222 Identities=18% Similarity=0.164 Sum_probs=108.9
Q ss_pred CEEEEEcCCCCChH--HHHHH-HHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCcc
Q 015364 1 MRIAVEGCMHGELD--NVYKT-LQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP 77 (408)
Q Consensus 1 mKIlV~GD~HG~ld--~i~~~-v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvp 77 (408)
|||++++|+|.... .+.+. ++.+.... .++|+|+++||++..+...+. .++...++.++.+. .....++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~----~~~~~~~~~~~l~~---l~~~g~~ 72 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDD----PSPFAREIAAALKA---LSDSGVP 72 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCc----CCHHHHHHHHHHHH---HHHcCCe
Confidence 99999999996532 22221 22222222 268999999999865432211 01112233333333 3344579
Q ss_pred EEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHH
Q 015364 78 TIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYD 157 (408)
Q Consensus 78 t~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~d 157 (408)
+++|.||||.... .... -..++..+....+++++|.||.-..|--... +...|. ..|.+ +|..-
T Consensus 73 v~~v~GNHD~~~~-~~~~----~~~g~~~l~~~~~~~~~g~~i~l~HGd~~~~-------~d~~y~--~~r~~--~r~~~ 136 (241)
T PRK05340 73 CYFMHGNRDFLLG-KRFA----KAAGMTLLPDPSVIDLYGQRVLLLHGDTLCT-------DDKAYQ--RFRRK--VRNPW 136 (241)
T ss_pred EEEEeCCCchhhh-HHHH----HhCCCEEeCCcEEEEECCEEEEEECCccccc-------CCHHHH--HHHHH--HhCHH
Confidence 9999999995311 1110 0134556666677788999998776642110 001110 01111 11111
Q ss_pred HHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhh---cccCCCCChHHHHHHHHHhCCCEEEEcCCCCcccee
Q 015364 158 VHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEK---EIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (408)
Q Consensus 158 v~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~---di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~ 234 (408)
.. .+-+..|..... .....+++++--+. ...-.......+.+++...+.++.++||.|..-...
T Consensus 137 ~~-----------~~~~~~p~~~~~--~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 203 (241)
T PRK05340 137 LQ-----------WLFLALPLSIRL--RIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQ 203 (241)
T ss_pred HH-----------HHHHhCCHHHHH--HHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceee
Confidence 11 111112221110 01111111110000 000122344668888899999999999999753222
Q ss_pred eccCCCCCeeEEEeccccCCCCCeeEE
Q 015364 235 VQHGEDSPVTKFLALDKCLPRRKFLQV 261 (408)
Q Consensus 235 ~~~~~~~~~TRFlaL~k~~~~~k~l~a 261 (408)
.. ..+..-+.++|+....+..|+.+
T Consensus 204 ~~--~~~~~~~~~~lgdw~~~~~~~~~ 228 (241)
T PRK05340 204 LQ--AGGQPATRIVLGDWHEQGSVLKV 228 (241)
T ss_pred cc--CCCcceEEEEeCCCCCCCeEEEE
Confidence 21 11112368999988766555543
No 27
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.99 E-value=6.5e-09 Score=97.33 Aligned_cols=104 Identities=20% Similarity=0.194 Sum_probs=58.7
Q ss_pred CEEEEEcCCCCChH----HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCc
Q 015364 1 MRIAVEGCMHGELD----NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (408)
Q Consensus 1 mKIlV~GD~HG~ld----~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pv 76 (408)
|||++++|+|.... .+.+.++.+.+ .++|++|++||++....... ..+.++++.. ..++
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~---~~~d~vl~~GD~~~~~~~~~-------------~~~~~~l~~l-~~~~ 64 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINA---LKPDLVVLTGDLVDGSVDVL-------------ELLLELLKKL-KAPL 64 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhc---cCCCEEEEcCcccCCcchhh-------------HHHHHHHhcc-CCCC
Confidence 89999999998643 33333333332 25899999999986543211 1233333333 3468
Q ss_pred cEEEEcCCCCChhhHHHHhhCCccCCceEEecCceE-EEECCEEEE
Q 015364 77 PTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGV-VKFGNIRIG 121 (408)
Q Consensus 77 pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv-~~i~GlrIa 121 (408)
|++++.||||...........---..|+.+|....+ ++.+|.+|.
T Consensus 65 ~v~~v~GNHD~~~~~~~~~~~~l~~~~v~~L~~~~~~~~~~~~~i~ 110 (223)
T cd07385 65 GVYAVLGNHDYYSGDEENWIEALESAGITVLRNESVEISVGGATIG 110 (223)
T ss_pred CEEEECCCcccccCchHHHHHHHHHcCCEEeecCcEEeccCCeEEE
Confidence 999999999975332211000001235666655443 244565543
No 28
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=98.85 E-value=3e-08 Score=96.95 Aligned_cols=185 Identities=19% Similarity=0.185 Sum_probs=98.1
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
.|++|+||.|.....-.+.+.++.+. ..++|++|++||+......... .....|.+.++... ..+|+++
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~-~~~~d~vl~~GDl~~~~~~~~~---------~~~~~~~~~~~~~~-~~~P~~~ 73 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE-LGNYDAILHVGDLAYADGYNNG---------SRWDTFMRQIEPLA-SYVPYMV 73 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc-cCCccEEEEcCchhhhcCCccc---------hhHHHHHHHHHHHH-hcCCcEE
Confidence 38999999995311112333444343 2379999999999743221100 01123333332221 3579999
Q ss_pred EcCCCCChhhHHHHhh------------CCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhh
Q 015364 81 IGGNHEASNYLWELYY------------GGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (408)
Q Consensus 81 I~GNHE~~~~l~el~~------------gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~ir 148 (408)
++||||.......... +....++.|| .+.+++++|.+|....... . .....++++
T Consensus 74 ~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-----sf~~g~v~fi~Lds~~~~~---~-----~~~~~~q~~ 140 (294)
T cd00839 74 TPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWY-----SFDVGPVHFVSLSTEVDFY---G-----DGPGSPQYD 140 (294)
T ss_pred cCcccccccCCCCcccccccccccccCCCCCCCCCceE-----EEeeCCEEEEEEecccccc---c-----CCCCcHHHH
Confidence 9999997532111000 0011123333 3467899999987643210 0 011122222
Q ss_pred hhhccchHHHHHHhccC---CCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEc
Q 015364 149 SVYHVREYDVHKLMQIE---EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSA 225 (408)
Q Consensus 149 s~yh~re~dv~kL~~~~---~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsG 225 (408)
-+ +. .|.+.. .+.-|+++|.++.......+.. .........+.+|+++.+...+|+|
T Consensus 141 WL----~~---~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~-------------~~~~~~~~~l~~ll~~~~v~~vl~G 200 (294)
T cd00839 141 WL----EA---DLAKVDRSKTPWIIVMGHRPMYCSNTDHDDC-------------IEGEKMRAALEDLFYKYGVDLVLSG 200 (294)
T ss_pred HH----HH---HHHHhcccCCCeEEEEeccCcEecCcccccc-------------chhHHHHHHHHHHHHHhCCCEEEEc
Confidence 22 11 222222 2457899998886543221100 0012345678889999999999999
Q ss_pred CCCC
Q 015364 226 HLHC 229 (408)
Q Consensus 226 H~H~ 229 (408)
|.|.
T Consensus 201 H~H~ 204 (294)
T cd00839 201 HVHA 204 (294)
T ss_pred ccee
Confidence 9995
No 29
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.82 E-value=2.3e-08 Score=93.08 Aligned_cols=183 Identities=17% Similarity=0.163 Sum_probs=93.3
Q ss_pred EEEEEcCCCCCh-----------HHHHHHHHHHHHh-cCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhh
Q 015364 2 RIAVEGCMHGEL-----------DNVYKTLQYMENI-NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (408)
Q Consensus 2 KIlV~GD~HG~l-----------d~i~~~v~~l~~k-~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~ 69 (408)
||+.++|+|=.. ...++.++++.+. ....+|++|++||++...... .+.+..+.+++.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~----------~~~~~~~~~~~~ 70 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPS----------PEALELLIEALR 70 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCC----------HHHHHHHHHHHH
Confidence 799999999432 1122222222211 112589999999998754311 112233444443
Q ss_pred CCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEec---C-ce--EE--EECCEEEEeecccCCCcccCCCCCCCCC
Q 015364 70 GQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG---F-AG--VV--KFGNIRIGGLSGIYNARHYRLGHYERPP 141 (408)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg---~-~g--v~--~i~GlrIaGlsGi~~~~~y~~~~~e~~P 141 (408)
....+.+|++++.||||............ ...++..++ . .. .. ...++.|.|++...+..
T Consensus 71 ~~~~~~~~v~~~~GNHD~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~----------- 138 (223)
T cd00840 71 RLKEAGIPVFIIAGNHDSPSRLGALSPLL-ALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRSR----------- 138 (223)
T ss_pred HHHHCCCCEEEecCCCCCccccccccchH-hhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHHH-----------
Confidence 33335789999999999875432211111 122343331 1 11 11 12457777765322100
Q ss_pred CChhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCE
Q 015364 142 YNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSY 221 (408)
Q Consensus 142 y~~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry 221 (408)
....+ ...+..........+-|+++|....+...... ...+.....+...+..|
T Consensus 139 ----~~~~~---~~~~~~~~~~~~~~~~Il~~H~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~d~ 192 (223)
T cd00840 139 ----LRDLL---ADAELRPRPLDPDDFNILLLHGGVAGAGPSDS-------------------ERAPFVPEALLPAGFDY 192 (223)
T ss_pred ----HHHHH---HHHHHHhhccCCCCcEEEEEeeeeecCCCCcc-------------------cccccCcHhhcCcCCCE
Confidence 00000 00001111122356789999999877653210 00223344455678899
Q ss_pred EEEcCCCCccc
Q 015364 222 WFSAHLHCKFA 232 (408)
Q Consensus 222 ~FsGH~H~~f~ 232 (408)
+++||+|....
T Consensus 193 v~~GH~H~~~~ 203 (223)
T cd00840 193 VALGHIHRPQI 203 (223)
T ss_pred EECCCcccCee
Confidence 99999997754
No 30
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.81 E-value=6.5e-07 Score=86.45 Aligned_cols=195 Identities=15% Similarity=0.082 Sum_probs=100.7
Q ss_pred EEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHH
Q 015364 2 RIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (408)
Q Consensus 2 KIlV~GD~HG~ld----------------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~ 65 (408)
+++++||.|-... .+-..++.+++.. .++|+||++||+.......+. .+++...|.
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~-~~pd~ii~~GDl~~~~~~~~~-------~~~~~~~~~ 77 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLN-PKPKFVVVCGDLVNAMPGDEL-------RERQVSDLK 77 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcC-CCCCEEEEeCCcCCCCcchhh-------HHHHHHHHH
Confidence 7899999997742 1222233333322 268999999999865433211 112334455
Q ss_pred HHhhCCCCCCccEEEEcCCCCChhh-----HHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCC
Q 015364 66 KYYSGQEVAPIPTIFIGGNHEASNY-----LWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERP 140 (408)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~~~-----l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~ 140 (408)
+.+... ..++|+++|+||||.... +.... . ...+. .-.+.++|+||.++....- ..+. ..
T Consensus 78 ~~~~~~-~~~vp~~~i~GNHD~~~~~~~~~~~~f~-~-~~g~~------~y~~~~~~~~~i~lds~~~----~~~~--~~ 142 (262)
T cd07395 78 DVLSLL-DPDIPLVCVCGNHDVGNTPTEESIKDYR-D-VFGDD------YFSFWVGGVFFIVLNSQLF----FDPS--EV 142 (262)
T ss_pred HHHhhc-cCCCcEEEeCCCCCCCCCCChhHHHHHH-H-HhCCc------ceEEEECCEEEEEeccccc----cCcc--cc
Confidence 554432 246899999999997311 11110 0 00111 1234578999988865421 1100 11
Q ss_pred C-CChhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCC
Q 015364 141 P-YNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKP 219 (408)
Q Consensus 141 P-y~~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkP 219 (408)
+ ...++++-+ +..+++-.+...+.-|+++|.+|........ ..+|. ........+.+++++.+-
T Consensus 143 ~~~~~~ql~WL----~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-------~~~~~----~~~~~~~~l~~ll~~~~V 207 (262)
T cd07395 143 PELAQAQDVWL----EEQLEIAKESDCKHVIVFQHIPWFLEDPDEE-------DSYFN----IPKSVRKPLLDKFKKAGV 207 (262)
T ss_pred ccchHHHHHHH----HHHHHHHHhccCCcEEEEECcCCccCCCCCC-------cccCC----cCHHHHHHHHHHHHhcCc
Confidence 1 122222222 1111111111235679999999964321100 00110 001123457778888888
Q ss_pred CEEEEcCCCCcccee
Q 015364 220 SYWFSAHLHCKFAAV 234 (408)
Q Consensus 220 ry~FsGH~H~~f~~~ 234 (408)
..+||||.|......
T Consensus 208 ~~v~~GH~H~~~~~~ 222 (262)
T cd07395 208 KAVFSGHYHRNAGGR 222 (262)
T ss_pred eEEEECccccCCceE
Confidence 999999999765443
No 31
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.81 E-value=1.9e-07 Score=99.06 Aligned_cols=125 Identities=16% Similarity=0.213 Sum_probs=74.2
Q ss_pred CEEEEEcCCC-CCh---HH-HHHHHHHHHHhc------CCCccEEEEecCccccCC--cchhccccchhhhHhhhHHHHH
Q 015364 1 MRIAVEGCMH-GEL---DN-VYKTLQYMENIN------SYKIDLLLCCGDFQAVRN--ENDMESLNVPRKYREMKSFWKY 67 (408)
Q Consensus 1 mKIlV~GD~H-G~l---d~-i~~~v~~l~~k~------g~~~DlLI~~GDf~~~~~--~~dl~~l~~p~k~~~l~dF~~y 67 (408)
++|++++|+| |.- .. +...++.++... ...+|.||++||+..... ..+...+..+.-+..+..+.++
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 5899999999 542 11 222233333110 125899999999986421 1111122233334444455555
Q ss_pred hhCCCCCCccEEEEcCCCCChhhHHH------HhhCCccC-CceEEecCceEEEECCEEEEeecccC
Q 015364 68 YSGQEVAPIPTIFIGGNHEASNYLWE------LYYGGWAA-PNIYFLGFAGVVKFGNIRIGGLSGIY 127 (408)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~~~l~e------l~~gg~va-~NI~yLg~~gv~~i~GlrIaGlsGi~ 127 (408)
++... ..+++++++||||....... .. ...+. .|+.+|..-..++++|.+|.+..|.-
T Consensus 324 L~~L~-~~i~V~~ipGNHD~~~~~lPQ~~l~~~l-~~~l~~~~v~~lsNP~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIP-EDIKIIISPGNHDAVRQAEPQPAFPEEI-RSLFPEHNVTFVSNPALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhh-cCCeEEEecCCCcchhhccCCCCccHHH-HHhcCcCCeEEecCCeEEEECCEEEEEECCCC
Confidence 54443 45799999999997642110 00 01122 58999988777889999999998863
No 32
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.80 E-value=2.8e-07 Score=87.88 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=65.3
Q ss_pred EEEEcCCCCChH---HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEE
Q 015364 3 IAVEGCMHGELD---NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTI 79 (408)
Q Consensus 3 IlV~GD~HG~ld---~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~ 79 (408)
+++++|+|.... ..-..++.+.+... ++|+||++||++..+...+. .+.-+..+.++.+.+ ...++++|
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~----~~~~~~~~~~~l~~L---~~~~~~v~ 72 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDD----PSTLARSVAQAIRQV---SDQGVPCY 72 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCC----CCHHHHHHHHHHHHH---HHCCCeEE
Confidence 378999996532 11122344443322 68999999999864322111 011122333344443 34467999
Q ss_pred EEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeeccc
Q 015364 80 FIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (408)
Q Consensus 80 fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (408)
+|.||||... ..... -..++..+....+++++|.+|.-+-|-
T Consensus 73 ~v~GNHD~~~--~~~~~---~~~gi~~l~~~~~~~~~g~~ill~HGd 114 (231)
T TIGR01854 73 FMHGNRDFLI--GKRFA---REAGMTLLPDPSVIDLYGQKVLLMHGD 114 (231)
T ss_pred EEcCCCchhh--hHHHH---HHCCCEEECCCEEEEECCEEEEEEcCc
Confidence 9999999631 11100 123567787777888899999877764
No 33
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.74 E-value=4.6e-07 Score=87.95 Aligned_cols=196 Identities=17% Similarity=0.180 Sum_probs=98.1
Q ss_pred EEEEcCCCCChH---H--HH-H-HHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCC-
Q 015364 3 IAVEGCMHGELD---N--VY-K-TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA- 74 (408)
Q Consensus 3 IlV~GD~HG~ld---~--i~-~-~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~- 74 (408)
|+.++|+|-... . .+ + .++.+++ .++|++|++||+.......+......+. +-.+|.+.+......
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~---~~pd~i~~~GD~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDV---IKPALVLATGDLTDNKTGNKLPSYQYQE---EWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHh---hCCCEEEEccccccccccCCCcccccHH---HHHHHHHHHHHhCCCC
Confidence 678999996432 1 11 1 1222322 3689999999998544322221110010 011444444333332
Q ss_pred CccEEEEcCCCCChhhH-----HHHh--hCCc-cCCceEEecCceEEE--ECCEEEEeecccCCCcccCCCCCCCCC-CC
Q 015364 75 PIPTIFIGGNHEASNYL-----WELY--YGGW-AAPNIYFLGFAGVVK--FGNIRIGGLSGIYNARHYRLGHYERPP-YN 143 (408)
Q Consensus 75 pvpt~fI~GNHE~~~~l-----~el~--~gg~-va~NI~yLg~~gv~~--i~GlrIaGlsGi~~~~~y~~~~~e~~P-y~ 143 (408)
+.|++.|+||||..+.. .... +.++ ..+.-+ ...+ .++++|.|+.+...... ..+ +...+ .+
T Consensus 76 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~~~~~~-----~~~~~~~~~~~~I~Ldt~~~~~~-~~~-~~~~g~l~ 148 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGRDGSFS-----FSHTTRFGNYSFIGVDPTLFPGP-KRP-FNFFGSLD 148 (256)
T ss_pred cceEEEeCCCCCcCCCCCccchhhHHHHhheecCCCccc-----eEEEecCCCEEEEEEcCccCCCC-CCC-CceeccCC
Confidence 57999999999975321 0100 1111 111111 1122 37899999887642110 000 00001 12
Q ss_pred hhhhhhhhccchHHHHHHhcc-CCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEE
Q 015364 144 ESTIRSVYHVREYDVHKLMQI-EEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYW 222 (408)
Q Consensus 144 ~~~irs~yh~re~dv~kL~~~-~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~ 222 (408)
+++++.+ .+.|.+. ..+.-|+++|-++....... ...++. +.+++++.+..+.
T Consensus 149 ~~ql~wL-------~~~L~~~~~~~~~IV~~HhP~~~~~~~~------------------~~~~~~-~~~ll~~~~v~~v 202 (256)
T cd07401 149 KKLLDRL-------EKELEKSTNSNYTIWFGHYPTSTIISPS------------------AKSSSK-FKDLLKKYNVTAY 202 (256)
T ss_pred HHHHHHH-------HHHHHhcccCCeEEEEEcccchhccCCC------------------cchhHH-HHHHHHhcCCcEE
Confidence 3333222 1122222 23567999999885432111 112223 8888999999999
Q ss_pred EEcCCCCccc-eeecc
Q 015364 223 FSAHLHCKFA-AVVQH 237 (408)
Q Consensus 223 FsGH~H~~f~-~~~~~ 237 (408)
||||.|.... ..+.+
T Consensus 203 l~GH~H~~~~~~p~h~ 218 (256)
T cd07401 203 LCGHLHPLGGLEPVHY 218 (256)
T ss_pred EeCCccCCCcceeeee
Confidence 9999997655 33433
No 34
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.73 E-value=7.1e-07 Score=84.31 Aligned_cols=195 Identities=15% Similarity=0.214 Sum_probs=102.4
Q ss_pred CEEEEEcCCCCChH---HHH-HHHHHHHHh-cCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCC
Q 015364 1 MRIAVEGCMHGELD---NVY-KTLQYMENI-NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAP 75 (408)
Q Consensus 1 mKIlV~GD~HG~ld---~i~-~~v~~l~~k-~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~p 75 (408)
.+|+++||+|-..+ ..+ +.++.+.+. ...++|++|++||+...... +..|....+..+- ..+.+
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~--------~~~~~~~~~~~~~---l~~~~ 69 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDN--------DAEWEAADKAFAR---LDKAG 69 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCC--------HHHHHHHHHHHHH---HHHcC
Confidence 48999999996332 112 122222221 11368999999999864321 1234444333333 33357
Q ss_pred ccEEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccch
Q 015364 76 IPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVRE 155 (408)
Q Consensus 76 vpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re 155 (408)
+|.++++||||. +.++. +. ...++++-+ +
T Consensus 70 ~p~~~~~GNHD~--------------------------------~~~ld-------~~--------~~~~ql~WL----~ 98 (214)
T cd07399 70 IPYSVLAGNHDL--------------------------------VLALE-------FG--------PRDEVLQWA----N 98 (214)
T ss_pred CcEEEECCCCcc--------------------------------hhhCC-------CC--------CCHHHHHHH----H
Confidence 899999999981 01110 00 011222221 1
Q ss_pred HHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHh-CCCEEEEcCCCCcccee
Q 015364 156 YDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLHCKFAAV 234 (408)
Q Consensus 156 ~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~l-kPry~FsGH~H~~f~~~ 234 (408)
+.|.+.....=|+++|.+|.......+... . + .....|...+.+|+++. +-+..||||.|......
T Consensus 99 ---~~L~~~~~~~~iv~~H~p~~~~~~~~~~~~-------~--~-~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 99 ---EVLKKHPDRPAILTTHAYLNCDDSRPDSID-------Y--D-SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred ---HHHHHCCCCCEEEEecccccCCCCcCcccc-------c--c-cccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 123333333459999999874322111000 0 0 01234556777888877 57889999999876555
Q ss_pred ec-cCCCCCeeEEEeccc-cC--CCCCeeEEEeccCCCCC
Q 015364 235 VQ-HGEDSPVTKFLALDK-CL--PRRKFLQVFEIESGQGP 270 (408)
Q Consensus 235 ~~-~~~~~~~TRFlaL~k-~~--~~~k~l~a~~i~~~~~~ 270 (408)
.. .+..+..+.=+..+. +. .+.-|+.++.++++...
T Consensus 166 ~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~ 205 (214)
T cd07399 166 LVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNK 205 (214)
T ss_pred EcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCE
Confidence 41 122233333222222 22 25578999988876553
No 35
>PLN02533 probable purple acid phosphatase
Probab=98.69 E-value=5.9e-07 Score=93.52 Aligned_cols=181 Identities=17% Similarity=0.246 Sum_probs=97.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
.|++|+||.+-. ......++.+++ ..+|++|++||+....... ..-..|.+.+... .+.+|.++
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~---~~pD~vl~~GDl~y~~~~~-----------~~wd~f~~~i~~l-~s~~P~m~ 203 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSK---WDYDVFILPGDLSYANFYQ-----------PLWDTFGRLVQPL-ASQRPWMV 203 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHh---cCCCEEEEcCccccccchH-----------HHHHHHHHHhhhH-hhcCceEE
Confidence 379999998632 111223444433 2689999999996532111 0123344444333 23579999
Q ss_pred EcCCCCChhh-------H---HH---HhhCC-ccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhh
Q 015364 81 IGGNHEASNY-------L---WE---LYYGG-WAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNEST 146 (408)
Q Consensus 81 I~GNHE~~~~-------l---~e---l~~gg-~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~ 146 (408)
++||||.... + .. .+..+ -...|.|| .+.++|++|..|+.-. ++.. ...+
T Consensus 204 ~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yY-----Sfd~g~vhfI~Lds~~---~~~~--------~~~Q 267 (427)
T PLN02533 204 THGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYY-----SFNVYGVHIIMLGSYT---DFEP--------GSEQ 267 (427)
T ss_pred eCccccccccccccCcCccchhhcccCCccccCCCCCceE-----EEEECCEEEEEEeCCc---cccC--------chHH
Confidence 9999997421 0 00 00100 01234444 3577899999887532 1211 1122
Q ss_pred hhhhhccchHHHHHHhccCCCccEEEeCCCCCCCcc-CCchhhhhhhcchhhhcccCCCCC-hHHHHHHHHHhCCCEEEE
Q 015364 147 IRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLG-SEPAAQLLEKLKPSYWFS 224 (408)
Q Consensus 147 irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~-~g~~~~L~~~kp~f~~di~~~~lG-S~~l~~Ll~~lkPry~Fs 224 (408)
.+-+ +.++.+...-..+.-|++.|-+|..... +.+. ....+ ...+..|+.+.++.++|+
T Consensus 268 ~~WL----e~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~---------------~~~~~~r~~le~Ll~~~~Vdlvls 328 (427)
T PLN02533 268 YQWL----ENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGE---------------KESVGMKESMETLLYKARVDLVFA 328 (427)
T ss_pred HHHH----HHHHHhhcccCCCEEEEEeCCCeeecccccCCc---------------chhHHHHHHHHHHHHHhCCcEEEe
Confidence 2221 2222222111235678999999976532 1100 00111 246788999999999999
Q ss_pred cCCCCccce
Q 015364 225 AHLHCKFAA 233 (408)
Q Consensus 225 GH~H~~f~~ 233 (408)
||.|. |++
T Consensus 329 GH~H~-YeR 336 (427)
T PLN02533 329 GHVHA-YER 336 (427)
T ss_pred cceec-ccc
Confidence 99994 444
No 36
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.68 E-value=6.7e-07 Score=82.37 Aligned_cols=38 Identities=21% Similarity=0.086 Sum_probs=29.0
Q ss_pred HHHHHHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEeccccC
Q 015364 210 AAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCL 253 (408)
Q Consensus 210 l~~Ll~~lkPry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~k~~ 253 (408)
+..+++...+.+.++||.|..+..... .++++|.+.++
T Consensus 98 ~~~~~~~~~~dvii~GHTH~p~~~~~~------g~~viNPGSv~ 135 (178)
T cd07394 98 LAALQRQLDVDILISGHTHKFEAFEHE------GKFFINPGSAT 135 (178)
T ss_pred HHHHHHhcCCCEEEECCCCcceEEEEC------CEEEEECCCCC
Confidence 455566678899999999987665442 38999999886
No 37
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.68 E-value=4.9e-07 Score=88.44 Aligned_cols=104 Identities=20% Similarity=0.185 Sum_probs=58.3
Q ss_pred CEEEEEcCCCCC----hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCc
Q 015364 1 MRIAVEGCMHGE----LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (408)
Q Consensus 1 mKIlV~GD~HG~----ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pv 76 (408)
|||++++|+|.. ...+.+.++.+++ .++|+|+++||+.......+ ...+.+.++... ++.
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~---~~pDlVli~GD~~d~~~~~~------------~~~~~~~L~~L~-~~~ 113 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIE---QKPDLILLGGDYVLFDMPLN------------FSAFSDVLSPLA-ECA 113 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHh---cCCCEEEEccCcCCCCcccc------------HHHHHHHHHHHh-hcC
Confidence 799999999976 3333333433332 36899999999875221111 112223333333 246
Q ss_pred cEEEEcCCCCChh------hHHHHhhCCccCCceEEecCceE-EEECC--EEEEeec
Q 015364 77 PTIFIGGNHEASN------YLWELYYGGWAAPNIYFLGFAGV-VKFGN--IRIGGLS 124 (408)
Q Consensus 77 pt~fI~GNHE~~~------~l~el~~gg~va~NI~yLg~~gv-~~i~G--lrIaGls 124 (408)
|+|+|.||||... .+.+... ..++..|.+..+ ++.+| +.|+|+.
T Consensus 114 pv~~V~GNHD~~~~~~~~~~~~~~l~----~~gi~lL~n~~~~i~~~~~~i~i~G~~ 166 (271)
T PRK11340 114 PTFACFGNHDRPVGTEKNHLIGETLK----SAGITVLFNQATVIATPNRQFELVGTG 166 (271)
T ss_pred CEEEecCCCCcccCccchHHHHHHHH----hcCcEEeeCCeEEEeeCCcEEEEEEec
Confidence 8999999999631 1222111 135666755443 23444 5667764
No 38
>PHA03008 hypothetical protein; Provisional
Probab=98.65 E-value=9.7e-08 Score=88.05 Aligned_cols=97 Identities=22% Similarity=0.259 Sum_probs=62.6
Q ss_pred CceEEecCceEEEE----CCEEEEeecccCCCcccCCCC----CCCCCCChhhhhhhhccchHHHHHHhccCCCccEEEe
Q 015364 102 PNIYFLGFAGVVKF----GNIRIGGLSGIYNARHYRLGH----YERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLS 173 (408)
Q Consensus 102 ~NI~yLg~~gv~~i----~GlrIaGlsGi~~~~~y~~~~----~e~~Py~~~~irs~yh~re~dv~kL~~~~~~vDILLT 173 (408)
-|+.||.++++ ++ .|++|.|.+-+-. ..|...+ .+.+.|..+ +..+......+. ..|||+|
T Consensus 99 gnIIYLeDs~V-tI~f~~rgIKIYGSP~sP~-~~F~~sai~k~~~~wAf~~~--------~d~~i~wwn~IP-~tDILIT 167 (234)
T PHA03008 99 LDIIILRDDLI-EFDFFDDIIKIYGQSHIED-KKFKNSHIHKALEGIAHIKK--------NDDEINYRNHIP-KCDILIT 167 (234)
T ss_pred CCEEEEeCCcE-EEEecCCceEEECCCCCcc-hhcccccccccccccccccC--------ccccchhhccCC-CCCEEEe
Confidence 47999998886 56 7999998654421 0010000 012223211 111111223444 4999999
Q ss_pred CCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCC
Q 015364 174 HDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHC 229 (408)
Q Consensus 174 HdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~ 229 (408)
|.+|.|+.+. .+|++.+.+-+.++||+||++||+-.
T Consensus 168 HgPP~GhLD~--------------------~vGC~~Ll~~I~rVKPKyHVFGh~~~ 203 (234)
T PHA03008 168 ASPPFAILDD--------------------DLACGDLFSKVIKIKPKFHIFNGLTQ 203 (234)
T ss_pred CCCCcccccc--------------------ccCcHHHHHHHHHhCCcEEEeCCccc
Confidence 9999999762 47999999988999999999999743
No 39
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=98.65 E-value=1e-06 Score=85.56 Aligned_cols=209 Identities=18% Similarity=0.202 Sum_probs=106.9
Q ss_pred CEEEEEcCCCCC-h---HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCc
Q 015364 1 MRIAVEGCMHGE-L---DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (408)
Q Consensus 1 mKIlV~GD~HG~-l---d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pv 76 (408)
|+++++||.-.. . ..+-+.+.++.++ .++|++|++||+.......+... ..+ ...|.+.++... ..+
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~--~~~dfvv~~GD~~y~~g~~~~~~----~~~--~~~~~~~~~~~~-~~~ 71 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAE--LGPDFILSLGDNFYDDGVGSVDD----PRF--ETTFEDVYSAPS-LQV 71 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHh--cCCCEEEeCCCccccCCCCCCcc----hHH--HHHHHHHccchh-hcC
Confidence 689999998764 1 2344444444444 26899999999863221100000 000 122344433222 568
Q ss_pred cEEEEcCCCCChhhHHHH-h------hCCccCCceEEecCceEEEEC------CEEEEeecccCCCcccCCC--CCCCCC
Q 015364 77 PTIFIGGNHEASNYLWEL-Y------YGGWAAPNIYFLGFAGVVKFG------NIRIGGLSGIYNARHYRLG--HYERPP 141 (408)
Q Consensus 77 pt~fI~GNHE~~~~l~el-~------~gg~va~NI~yLg~~gv~~i~------GlrIaGlsGi~~~~~y~~~--~~e~~P 141 (408)
|+|+|+||||........ . ...|..|+-|| .+.++ +++|.+|-...-...+... ......
T Consensus 72 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~y-----~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~ 146 (277)
T cd07378 72 PWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMPAYYY-----RVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPN 146 (277)
T ss_pred CeEEecCCcccCCCchheeehhccCCCCCccCcchhe-----EEEeecCCCCCEEEEEEEeChhHcCccccccccccCcc
Confidence 999999999976322111 0 11233444332 23344 6898887655421111000 000000
Q ss_pred --CChhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCC
Q 015364 142 --YNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKP 219 (408)
Q Consensus 142 --y~~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkP 219 (408)
...+++.-+ .+.|.....+.-|+++|.+|......+.. ..-...+.+++++.+.
T Consensus 147 ~~~~~~Q~~wL-------~~~L~~~~~~~~iv~~H~P~~~~~~~~~~-----------------~~~~~~l~~l~~~~~v 202 (277)
T cd07378 147 GKLAEEQLAWL-------EKTLAASTADWKIVVGHHPIYSSGEHGPT-----------------SCLVDRLLPLLKKYKV 202 (277)
T ss_pred hhhHHHHHHHH-------HHHHHhcCCCeEEEEeCccceeCCCCCCc-----------------HHHHHHHHHHHHHcCC
Confidence 011111111 11233333356699999998764332210 0113467888888899
Q ss_pred CEEEEcCCCCccceeeccCCCCCeeEEEeccc
Q 015364 220 SYWFSAHLHCKFAAVVQHGEDSPVTKFLALDK 251 (408)
Q Consensus 220 ry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~k 251 (408)
.++|+||.|........ ...|.++..+.
T Consensus 203 ~~vl~GH~H~~~~~~~~----~~~~~~i~~G~ 230 (277)
T cd07378 203 DAYLSGHDHNLQHIKDD----GSGTSFVVSGA 230 (277)
T ss_pred CEEEeCCcccceeeecC----CCCcEEEEeCC
Confidence 99999999975432211 13577776653
No 40
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=98.65 E-value=1.5e-06 Score=84.67 Aligned_cols=173 Identities=18% Similarity=0.165 Sum_probs=90.2
Q ss_pred CccEEEEecCccccCCcchhccccchhhh-HhhhHHHHHhhCCCCCCccEEEEcCCCCChh-------hH--HHHhhCCc
Q 015364 30 KIDLLLCCGDFQAVRNENDMESLNVPRKY-REMKSFWKYYSGQEVAPIPTIFIGGNHEASN-------YL--WELYYGGW 99 (408)
Q Consensus 30 ~~DlLI~~GDf~~~~~~~dl~~l~~p~k~-~~l~dF~~y~~g~~~~pvpt~fI~GNHE~~~-------~l--~el~~gg~ 99 (408)
++|++|++||++....... ...+ .+...|.+.+.... ..+|++.|+||||-.- .+ .+..+|.
T Consensus 45 ~PD~vv~lGDL~d~G~~~~------~~~~~~~~~rf~~i~~~~~-~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg~- 116 (257)
T cd08163 45 KPDSTIFLGDLFDGGRDWA------DEYWKKEYNRFMRIFDPSP-GRKMVESLPGNHDIGFGNGVVLPVRQRFEKYFGP- 116 (257)
T ss_pred CCCEEEEecccccCCeeCc------HHHHHHHHHHHHHHhcCCC-ccceEEEeCCCcccCCCCCCCHHHHHHHHHHhCC-
Confidence 6999999999975422111 0111 12344555442211 1368999999999520 00 1111221
Q ss_pred cCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHH-Hhcc-CCCccEEEeCCCC
Q 015364 100 AAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK-LMQI-EEPIDIFLSHDWP 177 (408)
Q Consensus 100 va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~k-L~~~-~~~vDILLTHdwP 177 (408)
...++.++|.+|.++-++.-... .. ......+.. + +.+ |... ....=||+||-+.
T Consensus 117 ---------~~~~~~~~~~~fV~Lds~~l~~~-~~-----~~~~~~~~~-~-------l~~~l~~~~~~~p~ILl~H~Pl 173 (257)
T cd08163 117 ---------TSRVIDVGNHTFVILDTISLSNK-DD-----PDVYQPPRE-F-------LHSFSAMKVKSKPRILLTHVPL 173 (257)
T ss_pred ---------CceEEEECCEEEEEEccccccCC-cc-----cccchhHHH-H-------HHhhhhccCCCCcEEEEecccc
Confidence 12456778889888877532110 00 001111110 0 111 2222 2345699999997
Q ss_pred CCCccCCchhhhhhhcchhhh---cccCCCCChHHHHHHHHHhCCCEEEEcCCCCcccee
Q 015364 178 CGITDYGNCKELVRHKQYFEK---EIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (408)
Q Consensus 178 ~gI~~~g~~~~L~~~kp~f~~---di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~ 234 (408)
.....-.. ..+-..++.+.. .--+..+.......|++.+||+..|+||.|...+-.
T Consensus 174 yr~~~~~c-g~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 174 YRPPNTSC-GPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred ccCCCCCC-CCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 66543211 111111111110 001135677888899999999999999999777654
No 41
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.64 E-value=9.1e-07 Score=81.34 Aligned_cols=89 Identities=25% Similarity=0.245 Sum_probs=59.8
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|||+|+||+|+....+...+ ++... .++|++|+|||+........ +.+. ...+.++
T Consensus 2 m~ilviSDtH~~~~~~~~~~-~~~~~--~~~d~vih~GD~~~~~~~~~-------------------l~~~--~~~~i~~ 57 (172)
T COG0622 2 MKILVISDTHGPLRAIEKAL-KIFNL--EKVDAVIHAGDSTSPFTLDA-------------------LEGG--LAAKLIA 57 (172)
T ss_pred cEEEEEeccCCChhhhhHHH-HHhhh--cCCCEEEECCCcCCccchHH-------------------hhcc--cccceEE
Confidence 89999999999996443333 22222 26999999999987643221 1110 2357899
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeeccc
Q 015364 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (408)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (408)
|.||+|....- --++...+++++|+||+-+-|.
T Consensus 58 V~GN~D~~~~~-------------~~~p~~~~~~~~g~ki~l~HGh 90 (172)
T COG0622 58 VRGNCDGEVDQ-------------EELPEELVLEVGGVKIFLTHGH 90 (172)
T ss_pred EEccCCCcccc-------------ccCChhHeEEECCEEEEEECCC
Confidence 99999875311 0134567788899999887773
No 42
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.63 E-value=4.5e-07 Score=91.62 Aligned_cols=110 Identities=22% Similarity=0.175 Sum_probs=62.8
Q ss_pred CEEEEEcCCCCC-----------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhh
Q 015364 1 MRIAVEGCMHGE-----------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (408)
Q Consensus 1 mKIlV~GD~HG~-----------ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~ 69 (408)
|||+.+||+|=. +...++.+-.+-.+. ++|+||++||++..+....... ...+.+ .++.
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~--~vD~VliaGDlfD~~~~~~~~~------~~~~~~--~l~~ 70 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAH--GITTWIQLGDTFDVRKAITQNT------MNFVRE--KIFD 70 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHc--CCCEEEECCcccCCCCCCCHHH------HHHHHH--HHHH
Confidence 999999999932 112333332222223 6899999999997653221111 011112 0122
Q ss_pred CCCCCCccEEEEcCCCCChh--h-----HHHHhhCCccCCceEEecCceEEEECCEEEEee
Q 015364 70 GQEVAPIPTIFIGGNHEASN--Y-----LWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGL 123 (408)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~--~-----l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGl 123 (408)
-+..+++|+++|.||||... . ..++. + ..+|++..+....++++|++|..+
T Consensus 71 ~L~~~gi~v~~I~GNHD~~~~~~~~~~~~~~ll-~--~~~~v~v~~~~~~v~i~g~~i~~l 128 (340)
T PHA02546 71 LLKEAGITLHVLVGNHDMYYKNTIRPNAPTELL-G--QYDNITVIDEPTTVDFDGCSIDLI 128 (340)
T ss_pred HHHHCCCeEEEEccCCCcccccccccCchHHHH-h--hCCCEEEeCCceEEEECCEEEEEC
Confidence 23456799999999999631 0 11111 1 236777776666677778776654
No 43
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=98.62 E-value=5.4e-07 Score=86.48 Aligned_cols=220 Identities=15% Similarity=0.176 Sum_probs=110.5
Q ss_pred EEEcCCC--CCh--HHHHHH-HHHHHHhc--CCCccEEEEecCccccCCc--chhccccchhhhHhhhHHHHHhhCCCCC
Q 015364 4 AVEGCMH--GEL--DNVYKT-LQYMENIN--SYKIDLLLCCGDFQAVRNE--NDMESLNVPRKYREMKSFWKYYSGQEVA 74 (408)
Q Consensus 4 lV~GD~H--G~l--d~i~~~-v~~l~~k~--g~~~DlLI~~GDf~~~~~~--~dl~~l~~p~k~~~l~dF~~y~~g~~~~ 74 (408)
++++|+| +.. ...++. ++.++... ..++|+||++||++..... .....+......+.+..+.++++.+..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 6899999 321 122222 22222211 1257999999999865311 000000001112234445555544443
Q ss_pred CccEEEEcCCCCChhhHH------HHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhh
Q 015364 75 PIPTIFIGGNHEASNYLW------ELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (408)
Q Consensus 75 pvpt~fI~GNHE~~~~l~------el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~ir 148 (408)
.+++++|+||||...... +.........|+..+.....++++|.+|.+..|..-. +..+. ...++.+.
T Consensus 81 ~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~~~~v~~l~Np~~~~~~g~~i~~~~G~~~~-d~~~~---~~~~~~~~-- 154 (243)
T cd07386 81 HIKIIIIPGNHDAVRQAEPQPALPEEIRKLFLPGNVEFVSNPALVKIHGVDVLIYHGRSID-DVVKL---IPGLSYDK-- 154 (243)
T ss_pred CCeEEEeCCCCCcccccCCCCCccHHHHhhcCCCceEEeCCCCEEEECCEEEEEECCCCHH-HHHHh---CCCCCccc--
Confidence 589999999999854211 1111111135888887777778999999988775321 11110 00000000
Q ss_pred hhhccchHH-HHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCC
Q 015364 149 SVYHVREYD-VHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL 227 (408)
Q Consensus 149 s~yh~re~d-v~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~ 227 (408)
..+ ++.+... .|-+|..-.. . +.+... . +.+.-.-.|.+.|+||.
T Consensus 155 ------~~~~~~~~l~~--------~hl~P~~~~~----~------~~~~~~-~---------~~~~~~~~p~vii~Gh~ 200 (243)
T cd07386 155 ------PGKAMEELLKR--------RHLAPIYGGR----T------PIAPEP-E---------DYLVIDEVPDILHTGHV 200 (243)
T ss_pred ------HHHHHHHHHhh--------cccCCCCCCC----E------eeCCCC-C---------CCEEecCCCCEEEECCC
Confidence 001 1111111 1233311100 0 000000 0 00111248999999999
Q ss_pred CCccceeeccCCCCCeeEEEeccccCCCCCeeEEEeccCCCCC
Q 015364 228 HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGP 270 (408)
Q Consensus 228 H~~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~~~~~ 270 (408)
|..+.... + .+++++.+.+-.+-.|=--|.|.+.++.
T Consensus 201 h~~~~~~~-~-----~~~~vn~Gsf~~~~~~~~~~~~~~~~~~ 237 (243)
T cd07386 201 HVYGVGVY-R-----GVLLVNSGTWQSQTEFQKKMNINPTPGK 237 (243)
T ss_pred CchHhEEE-C-----CEEEEECCCCcCCCCcceeeccCCCcce
Confidence 98665543 2 4899999999877777777888665443
No 44
>PRK09453 phosphodiesterase; Provisional
Probab=98.54 E-value=4.8e-07 Score=83.00 Aligned_cols=105 Identities=20% Similarity=0.214 Sum_probs=59.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|||+|+||+||+..++-+.++.+.+ . ++|.+|||||+....... ..|.+|. ..++.+.+ ++...++++
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~-~--~~d~ii~lGDi~~~~~~~-----~~~~~~~-~~~~~~~l---~~~~~~v~~ 68 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQ-S--GADWLVHLGDVLYHGPRN-----PLPEGYA-PKKVAELL---NAYADKIIA 68 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHh-c--CCCEEEEcccccccCcCC-----CCccccC-HHHHHHHH---HhcCCceEE
Confidence 9999999999998765444444433 2 589999999997532110 1112221 12233332 223357899
Q ss_pred EcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecc
Q 015364 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSG 125 (408)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsG 125 (408)
|.||||..- .....+. + .+.....++++|.||.-+-|
T Consensus 69 V~GNhD~~~--~~~~~~~---~---~~~~~~~~~l~g~~i~l~HG 105 (182)
T PRK09453 69 VRGNCDSEV--DQMLLHF---P---IMAPYQQVLLEGKRLFLTHG 105 (182)
T ss_pred EccCCcchh--hhhccCC---c---ccCceEEEEECCeEEEEECC
Confidence 999999631 1111110 1 11122345778999876655
No 45
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.41 E-value=3e-06 Score=78.70 Aligned_cols=74 Identities=20% Similarity=0.154 Sum_probs=46.6
Q ss_pred CEEEEEcCCCCChH-----------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhh
Q 015364 1 MRIAVEGCMHGELD-----------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (408)
Q Consensus 1 mKIlV~GD~HG~ld-----------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~ 69 (408)
+||++++|+|-... ...+.++++-++ .++|++|++||+........ ..++.+..+.+.+
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vv~~GDl~~~~~~~~-------~~~~~~~~~~~~l- 72 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA--EKPDLVVLTGDLITGENTND-------NSTSALDKAVSPM- 72 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh--cCCCEEEECCccccCCCCch-------HHHHHHHHHHHHH-
Confidence 69999999996332 223333333222 26899999999976432211 1244455555543
Q ss_pred CCCCCCccEEEEcCCCC
Q 015364 70 GQEVAPIPTIFIGGNHE 86 (408)
Q Consensus 70 g~~~~pvpt~fI~GNHE 86 (408)
....+|+++|.||||
T Consensus 73 --~~~~~p~~~~~GNHD 87 (199)
T cd07383 73 --IDRKIPWAATFGNHD 87 (199)
T ss_pred --HHcCCCEEEECccCC
Confidence 334689999999998
No 46
>PHA02239 putative protein phosphatase
Probab=98.37 E-value=7.7e-07 Score=85.65 Aligned_cols=73 Identities=16% Similarity=0.258 Sum_probs=50.0
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|||+++||+||.++.+.+.++.+....+ +.|.||++||+..-.... . +-+..+.+. ...+..+++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~-~~d~li~lGD~iDrG~~s-~---------~v~~~l~~~----~~~~~~~~~ 65 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERK-PEETIVFLGDYVDRGKRS-K---------DVVNYIFDL----MSNDDNVVT 65 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCC-CCCEEEEecCcCCCCCCh-H---------HHHHHHHHH----hhcCCCeEE
Confidence 8999999999999988777777654433 579999999998633211 1 112222332 223457899
Q ss_pred EcCCCCCh
Q 015364 81 IGGNHEAS 88 (408)
Q Consensus 81 I~GNHE~~ 88 (408)
|.||||..
T Consensus 66 l~GNHE~~ 73 (235)
T PHA02239 66 LLGNHDDE 73 (235)
T ss_pred EECCcHHH
Confidence 99999864
No 47
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.31 E-value=2.8e-05 Score=74.76 Aligned_cols=77 Identities=32% Similarity=0.436 Sum_probs=52.1
Q ss_pred CEEEEEcCCCCC--h---HHHH-HHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCC
Q 015364 1 MRIAVEGCMHGE--L---DNVY-KTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA 74 (408)
Q Consensus 1 mKIlV~GD~HG~--l---d~i~-~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~ 74 (408)
|||+.++|.|-. . ..+. +.++.++. .++|+||+.||+.... .+..|+.+.+|.+ ....
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~---~~~D~~v~tGDl~~~~---------~~~~~~~~~~~l~----~~~~ 64 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQ---LKPDLLVVTGDLTNDG---------EPEEYRRLKELLA----RLEL 64 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhc---CCCCEEEEccCcCCCC---------CHHHHHHHHHHHh----hccC
Confidence 899999999976 1 1222 22333331 3679999999997652 2344666666665 3356
Q ss_pred CccEEEEcCCCCChhhHHH
Q 015364 75 PIPTIFIGGNHEASNYLWE 93 (408)
Q Consensus 75 pvpt~fI~GNHE~~~~l~e 93 (408)
+.|+++++||||......+
T Consensus 65 ~~~~~~vpGNHD~~~~~~~ 83 (301)
T COG1409 65 PAPVIVVPGNHDARVVNGE 83 (301)
T ss_pred CCceEeeCCCCcCCchHHH
Confidence 7899999999998755443
No 48
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=98.24 E-value=1.2e-06 Score=86.30 Aligned_cols=69 Identities=19% Similarity=0.256 Sum_probs=47.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|+|+|+||+||+++++.+.++++.-. .+.|.||++||+..-... ..+ ..+++... ...+++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~--~~~D~li~lGDlVdrGp~-s~~-------------vl~~l~~l---~~~~~~ 61 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFD--PAKDTLWLVGDLVNRGPD-SLE-------------VLRFVKSL---GDSAVT 61 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCC--CCCCEEEEeCCccCCCcC-HHH-------------HHHHHHhc---CCCeEE
Confidence 89999999999999987766655211 257999999999864322 111 12332222 336789
Q ss_pred EcCCCCCh
Q 015364 81 IGGNHEAS 88 (408)
Q Consensus 81 I~GNHE~~ 88 (408)
|.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999874
No 49
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=98.17 E-value=2.3e-06 Score=81.79 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=47.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHh-------cCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCC
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENI-------NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEV 73 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k-------~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~ 73 (408)
|||+|+||+||+++++.+.++.+.-. .+.+.|.||++||+..-... ..+ -.+++.....
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~-s~e-------------vl~~l~~l~~ 66 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD-SPE-------------VLRLVMSMVA 66 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC-HHH-------------HHHHHHHHhh
Confidence 89999999999999988877765221 11137999999999763321 111 1223222211
Q ss_pred CCccEEEEcCCCCCh
Q 015364 74 APIPTIFIGGNHEAS 88 (408)
Q Consensus 74 ~pvpt~fI~GNHE~~ 88 (408)
+-.+++|.||||..
T Consensus 67 -~~~~~~v~GNHE~~ 80 (234)
T cd07423 67 -AGAALCVPGNHDNK 80 (234)
T ss_pred -CCcEEEEECCcHHH
Confidence 12478999999864
No 50
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.15 E-value=0.00011 Score=70.39 Aligned_cols=112 Identities=19% Similarity=0.136 Sum_probs=65.4
Q ss_pred CEEEEEcCCCCCh---------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCC
Q 015364 1 MRIAVEGCMHGEL---------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQ 71 (408)
Q Consensus 1 mKIlV~GD~HG~l---------d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~ 71 (408)
++|+.++|+||.+ ..+...++++++. + +-.+++..||+.......+. .+.+.|-+..
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~-~-~~~l~v~~GD~~~~~~~~~~------~~~~~~~~~l------ 66 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAE-N-ENTLLLDAGDNFDGSPPSTA------TKGEANIELM------ 66 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhc-C-CCeEEEeCCccCCCccchhc------cCCcHHHHHH------
Confidence 6899999999776 4455555555443 2 33488999999764332211 1122222222
Q ss_pred CCCCccEEEEcCCCCChh---hHHHHh-h--CCccCCceEEec---------CceEEEECCEEEEeecccC
Q 015364 72 EVAPIPTIFIGGNHEASN---YLWELY-Y--GGWAAPNIYFLG---------FAGVVKFGNIRIGGLSGIY 127 (408)
Q Consensus 72 ~~~pvpt~fI~GNHE~~~---~l~el~-~--gg~va~NI~yLg---------~~gv~~i~GlrIaGlsGi~ 127 (408)
..+. ..+++.||||... .+.+.. . .-+++.|+.+-+ ..-+++++|+|||-+|-..
T Consensus 67 ~~~g-~d~~~~GNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~ 136 (252)
T cd00845 67 NALG-YDAVTIGNHEFDYGLDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTT 136 (252)
T ss_pred HhcC-CCEEeeccccccccHHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEecc
Confidence 2233 3567889999742 222222 1 226677887643 1346688999998776543
No 51
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.12 E-value=0.00014 Score=70.98 Aligned_cols=223 Identities=15% Similarity=0.091 Sum_probs=108.4
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEE-ecCccccCCcchhccccchhhhHhhhH
Q 015364 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLC-CGDFQAVRNENDMESLNVPRKYREMKS 63 (408)
Q Consensus 1 mKIlV~GD~HG~ld----------------~i~~~v~~l~~k~g~~~DlLI~-~GDf~~~~~~~dl~~l~~p~k~~~l~d 63 (408)
++|+.++|+||.+. .+...++++.++ ..|+|++ +||++......+...-.-+.+...+-+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~---~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~ 77 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE---NPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIA 77 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc---CCCeEEEeCCccCCccHHHHHhhhcccCCCChHHH
Confidence 58999999999873 234444444333 3577776 999976432111100000001111222
Q ss_pred HHHHhhCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEec-------CceEEEEC-CEEEEeecccCCC
Q 015364 64 FWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG-------FAGVVKFG-NIRIGGLSGIYNA 129 (408)
Q Consensus 64 F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg-------~~gv~~i~-GlrIaGlsGi~~~ 129 (408)
.. ..+.+ .+++.||||.. ..+.+... -.+++.|+++.. ..-+++++ |+|||-+|-....
T Consensus 78 ~l------n~~g~-d~~~lGNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~ 150 (277)
T cd07410 78 AM------NALGY-DAGTLGNHEFNYGLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQ 150 (277)
T ss_pred HH------HhcCC-CEEeecccCcccCHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcc
Confidence 22 22333 46777999965 23333321 237888998764 22456789 9999988654322
Q ss_pred cc-cCCC-CCCCCCCChhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCCh
Q 015364 130 RH-YRLG-HYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGS 207 (408)
Q Consensus 130 ~~-y~~~-~~e~~Py~~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS 207 (408)
.. +..+ ......+.. .+.++ +..+.+|.+-..++=|+|+|..-..-.. ....+.
T Consensus 151 ~~~~~~~~~~~~~~~~d-~~~~~----~~~v~~lr~~~~D~IIvl~H~g~~~~~~-------------------~~~~~~ 206 (277)
T cd07410 151 IPNWEKPNLIGGLKFTD-PVETA----KKYVPKLRAEGADVVVVLAHGGFERDLE-------------------ESLTGE 206 (277)
T ss_pred cccccCcccCCCcEEcC-HHHHH----HHHHHHHHHcCCCEEEEEecCCcCCCcc-------------------cccCCc
Confidence 11 1000 001111211 01111 1113334331223446788864322110 011222
Q ss_pred HHHHHHHHHh-CCCEEEEcCCCCccceeeccCCCCCeeEEEeccccCCCCCeeEEEecc
Q 015364 208 EPAAQLLEKL-KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (408)
Q Consensus 208 ~~l~~Ll~~l-kPry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~ 265 (408)
....+|++.+ .....|+||.|..+.... ...|.++. .+..-+++..++|.
T Consensus 207 ~~~~~la~~~~~vD~IlgGHsH~~~~~~~-----~~~~~v~q---~g~~g~~vg~l~l~ 257 (277)
T cd07410 207 NAAYELAEEVPGIDAILTGHQHRRFPGPT-----VNGVPVVQ---PGNWGSHLGVIDLT 257 (277)
T ss_pred cHHHHHHhcCCCCcEEEeCCCccccccCC-----cCCEEEEc---CChhhCEEEEEEEE
Confidence 3345666663 456789999998775421 11344443 33455677777664
No 52
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=98.11 E-value=5.1e-06 Score=77.87 Aligned_cols=67 Identities=24% Similarity=0.177 Sum_probs=45.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
+||+|+||+||+++++.+.++.+..+ ...|.+|++||+..-... .. +..+++.. ..+++
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~--~~~d~~~~~GD~v~~g~~-~~-------------~~~~~l~~-----~~~~~ 59 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFD--PARDRLISVGDLIDRGPE-SL-------------ACLELLLE-----PWFHA 59 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCC--CCCCEEEEeCCcccCCCC-HH-------------HHHHHHhc-----CCEEE
Confidence 58999999999998887666544221 148999999999753221 11 12333321 25799
Q ss_pred EcCCCCCh
Q 015364 81 IGGNHEAS 88 (408)
Q Consensus 81 I~GNHE~~ 88 (408)
|.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999975
No 53
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.07 E-value=8.2e-05 Score=68.55 Aligned_cols=175 Identities=21% Similarity=0.281 Sum_probs=102.4
Q ss_pred CEEEEEcCCCCC-----------------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhH
Q 015364 1 MRIAVEGCMHGE-----------------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKS 63 (408)
Q Consensus 1 mKIlV~GD~HG~-----------------ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~d 63 (408)
|+|..+.|.|-. .++|.+ .+..+-. +-|.+++.||+--.-+. +. ...|
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k---~W~~~v~-~eDiVllpGDiSWaM~l--------~e---a~~D 65 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKK---HWRSKVS-PEDIVLLPGDISWAMRL--------EE---AEED 65 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHH---HHHhcCC-hhhEEEecccchhheec--------hh---hhhh
Confidence 788888888833 333432 2223322 67999999998632111 10 0112
Q ss_pred HHHHhhCCCCCCccEEEEcCCCCCh-hhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCC
Q 015364 64 FWKYYSGQEVAPIPTIFIGGNHEAS-NYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPY 142 (408)
Q Consensus 64 F~~y~~g~~~~pvpt~fI~GNHE~~-~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py 142 (408)
| +++ ...|-..|.|.||||-= .....+. .-+-|-++|+..+ +.+..+-|+|.-|-..+. +..-||
T Consensus 66 l-~~i---~~LPG~K~m~rGNHDYWw~s~skl~--n~lp~~l~~~n~~--f~l~n~aI~G~RgW~s~~------~~~e~~ 131 (230)
T COG1768 66 L-RFI---GDLPGTKYMIRGNHDYWWSSISKLN--NALPPILFYLNNG--FELLNYAIVGVRGWDSPS------FDSEPL 131 (230)
T ss_pred h-hhh---hcCCCcEEEEecCCccccchHHHHH--hhcCchHhhhccc--eeEeeEEEEEeecccCCC------CCcCcc
Confidence 2 232 44566789999999852 1111111 1134556777543 345558888877655431 224568
Q ss_pred ChhhhhhhhccchHHHHHH---hccCCCcc--EEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHh
Q 015364 143 NESTIRSVYHVREYDVHKL---MQIEEPID--IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL 217 (408)
Q Consensus 143 ~~~~irs~yh~re~dv~kL---~~~~~~vD--ILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~l 217 (408)
++++-+-+ .||..--++ .+++++++ |++||-+|..-..- + -.+.++++.-
T Consensus 132 te~Deki~--~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t----------------------~-~~~sevlee~ 186 (230)
T COG1768 132 TEQDEKIF--LREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGT----------------------P-GPFSEVLEEG 186 (230)
T ss_pred chhHHHHH--HHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCC----------------------C-cchHHHHhhc
Confidence 87765433 345432222 34555665 88999999764321 1 1478899999
Q ss_pred CCCEEEEcCCCC
Q 015364 218 KPSYWFSAHLHC 229 (408)
Q Consensus 218 kPry~FsGH~H~ 229 (408)
|+...+.||+|-
T Consensus 187 rv~~~lyGHlHg 198 (230)
T COG1768 187 RVSKCLYGHLHG 198 (230)
T ss_pred ceeeEEeeeccC
Confidence 999999999994
No 54
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.07 E-value=9.7e-06 Score=83.08 Aligned_cols=78 Identities=28% Similarity=0.413 Sum_probs=53.4
Q ss_pred CEEEEEcCCCCC---------hHHHH----HHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHH
Q 015364 1 MRIAVEGCMHGE---------LDNVY----KTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (408)
Q Consensus 1 mKIlV~GD~HG~---------ld~i~----~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y 67 (408)
|||+.++|+|=. .+..+ +.++.+ ++. .+|+||++||+|...+.. -+.+..|.+.
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a-~~~--~vD~vliAGDlFd~~~Ps----------~~a~~~~~~~ 67 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIA-KEE--KVDFVLIAGDLFDTNNPS----------PRALKLFLEA 67 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHH-HHc--cCCEEEEccccccCCCCC----------HHHHHHHHHH
Confidence 899999999965 22222 223322 222 589999999999764321 1234555666
Q ss_pred hhCCCCCCccEEEEcCCCCChhhH
Q 015364 68 YSGQEVAPIPTIFIGGNHEASNYL 91 (408)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~~~l 91 (408)
+.-...+.+|+|.|.||||....+
T Consensus 68 l~~l~~~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 68 LRRLKDAGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred HHHhccCCCcEEEecCCCCchhcc
Confidence 655677889999999999998654
No 55
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.06 E-value=4.5e-05 Score=71.50 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=33.4
Q ss_pred EEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceee
Q 015364 170 IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVV 235 (408)
Q Consensus 170 ILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~ 235 (408)
|++||.++.... .+.+..++.+++|...|+||.|...-...
T Consensus 112 i~lsH~P~~~~~-------------------------~~~~~~~~~~~~p~~Ifs~H~H~s~~~~~ 152 (195)
T cd08166 112 IMLSHVPLLAEG-------------------------GQALKHVVTDLDPDLIFSAHRHKSSIFMY 152 (195)
T ss_pred eeeecccccccc-------------------------cHHHHHHHHhcCceEEEEcCccceeeEEe
Confidence 999999886532 23688999999999999999998766554
No 56
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.06 E-value=9.4e-06 Score=78.79 Aligned_cols=79 Identities=28% Similarity=0.388 Sum_probs=47.4
Q ss_pred CEEEEEcCCCCCh--------H---HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhh
Q 015364 1 MRIAVEGCMHGEL--------D---NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (408)
Q Consensus 1 mKIlV~GD~HG~l--------d---~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~ 69 (408)
|||+.++|+|-.- + ..++.+..+..+. ++|+||++||++...+... + ....|.+++.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~--~~D~lli~GDi~d~~~p~~---------~-~~~~~~~~l~ 68 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAE--QIDALLVAGDVFDTANPPA---------E-AQELFNAFFR 68 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHc--CCCEEEECCccCCCCCCCH---------H-HHHHHHHHHH
Confidence 9999999999421 1 1222222222222 5999999999997553221 1 1122333333
Q ss_pred CCCCC-CccEEEEcCCCCChhhH
Q 015364 70 GQEVA-PIPTIFIGGNHEASNYL 91 (408)
Q Consensus 70 g~~~~-pvpt~fI~GNHE~~~~l 91 (408)
.+... ++|+++|.||||....+
T Consensus 69 ~l~~~~~i~v~~i~GNHD~~~~~ 91 (253)
T TIGR00619 69 NLSDANPIPIVVISGNHDSAQRL 91 (253)
T ss_pred HHHhcCCceEEEEccCCCChhhc
Confidence 33333 48999999999986543
No 57
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.02 E-value=0.0005 Score=66.71 Aligned_cols=112 Identities=17% Similarity=0.135 Sum_probs=64.8
Q ss_pred CEEEEEcCCC----------CChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhC
Q 015364 1 MRIAVEGCMH----------GELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSG 70 (408)
Q Consensus 1 mKIlV~GD~H----------G~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g 70 (408)
++|+-..|+| |.+..+...++++.+++ +-.++|.+||++......++. +.+.+- +.+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~--~~~l~l~~GD~~~g~~~~~~~------~g~~~~---~~l-- 67 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKEN--PNTLVLFSGDVLSPSLLSTAT------KGKQMV---PVL-- 67 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcC--CCEEEEECCCccCCccchhhc------CCccHH---HHH--
Confidence 4788899999 24556666666555432 334999999998543221111 011122 222
Q ss_pred CCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEecC---------ceEEEECCEEEEeecccC
Q 015364 71 QEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLGF---------AGVVKFGNIRIGGLSGIY 127 (408)
Q Consensus 71 ~~~~pvpt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg~---------~gv~~i~GlrIaGlsGi~ 127 (408)
..+. ..+++.||||.. ..+.+... -.+++.|+++-+. .-+++.+|+|||-+|=..
T Consensus 68 -~~l~-~d~~~~GNHefd~g~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~ 137 (257)
T cd07406 68 -NALG-VDLACFGNHEFDFGEDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVE 137 (257)
T ss_pred -HhcC-CcEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEec
Confidence 2222 247789999974 23333321 2378888877432 345577999998776443
No 58
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.00 E-value=3.6e-05 Score=71.68 Aligned_cols=111 Identities=15% Similarity=0.037 Sum_probs=58.2
Q ss_pred EEEcCCCCChH--HHHHHHHHHHHhc-CCCccEEEEecCccccCCcchhccccchhhhHh-hhHHHHHhhCCCCCCccEE
Q 015364 4 AVEGCMHGELD--NVYKTLQYMENIN-SYKIDLLLCCGDFQAVRNENDMESLNVPRKYRE-MKSFWKYYSGQEVAPIPTI 79 (408)
Q Consensus 4 lV~GD~HG~ld--~i~~~v~~l~~k~-g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~-l~dF~~y~~g~~~~pvpt~ 79 (408)
++++|+|-... ........+.... ..++|.|+++||++..+...+.. .+..+.. +..+.+. .....+++
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~---~~~~~~~~~~~l~~~----~~~~~~v~ 73 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEV---VPPAAHEVLAALLRL----ADRGTRVY 73 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCC---CChHHHHHHHHHHHH----HHCCCeEE
Confidence 47899993221 1111122222211 12689999999999754322211 1111222 1333333 23457899
Q ss_pred EEcCCCCChhhHHHHhhCCccCCceEEecCce-EEEECCEEEEeeccc
Q 015364 80 FIGGNHEASNYLWELYYGGWAAPNIYFLGFAG-VVKFGNIRIGGLSGI 126 (408)
Q Consensus 80 fI~GNHE~~~~l~el~~gg~va~NI~yLg~~g-v~~i~GlrIaGlsGi 126 (408)
+|.||||..-.-.... ...+..+.... .++++|.+|...-|-
T Consensus 74 ~v~GNHD~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~HG~ 116 (217)
T cd07398 74 YVPGNHDFLLGDFFAE-----ELGLILLPDPLVHLELDGKRILLEHGD 116 (217)
T ss_pred EECCCchHHHHhHHHH-----HcCCEEeccceEEEeeCCeEEEEECCC
Confidence 9999998642111111 11233344444 668899999988775
No 59
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.92 E-value=2.3e-05 Score=81.23 Aligned_cols=77 Identities=18% Similarity=0.217 Sum_probs=46.6
Q ss_pred CEEEEEcCCCCC--h---------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhH--hhhHHHHH
Q 015364 1 MRIAVEGCMHGE--L---------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYR--EMKSFWKY 67 (408)
Q Consensus 1 mKIlV~GD~HG~--l---------d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~--~l~dF~~y 67 (408)
|||+.++|+|-. + ..+.+.+..+-.+ .++|+||++||++...+. +.+. .+..|...
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~--~~~D~viIaGDifD~~~p---------~~~a~~~~~~~l~~ 69 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQE--HQVDAIIVAGDIFDTGSP---------PSYARELYNRFVVN 69 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHh--cCCCEEEECCccccCCCC---------cHHHHHHHHHHHHH
Confidence 899999999943 1 1112222222122 269999999999864321 1111 12334333
Q ss_pred hhCCCCCCccEEEEcCCCCChhhH
Q 015364 68 YSGQEVAPIPTIFIGGNHEASNYL 91 (408)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~~~l 91 (408)
+....+|+++|.||||....+
T Consensus 70 ---L~~~~~~v~~I~GNHD~~~~l 90 (407)
T PRK10966 70 ---LQQTGCQLVVLAGNHDSVATL 90 (407)
T ss_pred ---HHhcCCcEEEEcCCCCChhhh
Confidence 344567899999999987654
No 60
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.91 E-value=0.00074 Score=66.46 Aligned_cols=112 Identities=17% Similarity=0.067 Sum_probs=62.0
Q ss_pred CEEEEEcCCCCCh---------------------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhH
Q 015364 1 MRIAVEGCMHGEL---------------------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYR 59 (408)
Q Consensus 1 mKIlV~GD~HG~l---------------------d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~ 59 (408)
++|+-++|+||.+ ..+...++++.++ + +--+++-+||++......++. +-+
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~-~-~~~l~ld~GD~~~gs~~~~~~------~g~ 72 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAE-N-PNVLFLNAGDAFQGTLWYTLY------KGN 72 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhc-C-CCEEEEeCCCCCCCcchhhhc------CCh
Confidence 5899999999865 3344444444333 2 334666699987543222110 111
Q ss_pred hhhHHHHHhhCCCCCCccEEEEcCCCCChh---hHHHHh---hCCccCCceEEecC----------ceEEEECCEEEEee
Q 015364 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEASN---YLWELY---YGGWAAPNIYFLGF----------AGVVKFGNIRIGGL 123 (408)
Q Consensus 60 ~l~dF~~y~~g~~~~pvpt~fI~GNHE~~~---~l~el~---~gg~va~NI~yLg~----------~gv~~i~GlrIaGl 123 (408)
.+-+.. ..+.+. .++.||||..- .+.+.. .-.+++.|++.-.. .-+++++|+|||-+
T Consensus 73 ~~~~~l------n~~g~D-~~~lGNHefd~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgvi 145 (281)
T cd07409 73 ADAEFM------NLLGYD-AMTLGNHEFDDGVEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGII 145 (281)
T ss_pred HHHHHH------HhcCCC-EEEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEE
Confidence 122222 234444 44568999752 233322 23478888875432 24567899999877
Q ss_pred cccC
Q 015364 124 SGIY 127 (408)
Q Consensus 124 sGi~ 127 (408)
|=..
T Consensus 146 G~~~ 149 (281)
T cd07409 146 GYTT 149 (281)
T ss_pred EEec
Confidence 6443
No 61
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.91 E-value=3.8e-05 Score=79.56 Aligned_cols=81 Identities=26% Similarity=0.391 Sum_probs=48.5
Q ss_pred CEEEEEcCCCCCh-----------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhh
Q 015364 1 MRIAVEGCMHGEL-----------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (408)
Q Consensus 1 mKIlV~GD~HG~l-----------d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~ 69 (408)
|||++++|+|-.. -..++.+-.+..+ .++|+||++||++...... ..++ ++-|.-+.+|.-
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~--~~vD~VLiaGDLFd~~~Ps-~~~~-----~~~~~~lr~~~~ 75 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKE--QDVDMILLGGDLFHENKPS-RKSL-----YQVLRSLRLYCL 75 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHH--cCCCEEEECCccCCCCCCC-HHHH-----HHHHHHHHHhhc
Confidence 8999999999531 1122222222222 2699999999999653321 1111 333444444321
Q ss_pred C-----------------------------CCCCCccEEEEcCCCCChh
Q 015364 70 G-----------------------------QEVAPIPTIFIGGNHEASN 89 (408)
Q Consensus 70 g-----------------------------~~~~pvpt~fI~GNHE~~~ 89 (408)
| ...+.+|++.|.||||.+.
T Consensus 76 g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 76 GDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred cCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1 1125789999999999985
No 62
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=97.90 E-value=1.5e-05 Score=75.46 Aligned_cols=67 Identities=21% Similarity=0.238 Sum_probs=45.8
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
.||+|+||+||+++++.+.++.+..+ ...|.|||+||+..-.. ...++ .+++.. ...++
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~--~~~D~li~lGDlvDrGp-~s~~v-------------l~~l~~-----~~~~~ 75 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFD--PWRDLLISVGDLIDRGP-QSLRC-------------LQLLEE-----HWVRA 75 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCC--cccCEEEEcCcccCCCc-CHHHH-------------HHHHHc-----CCceE
Confidence 48999999999999998888776332 14799999999975322 11111 233311 13578
Q ss_pred EcCCCCCh
Q 015364 81 IGGNHEAS 88 (408)
Q Consensus 81 I~GNHE~~ 88 (408)
|.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999854
No 63
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.89 E-value=0.00042 Score=67.12 Aligned_cols=110 Identities=21% Similarity=0.253 Sum_probs=63.5
Q ss_pred CEEEEEcCCCCChH----------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhC
Q 015364 1 MRIAVEGCMHGELD----------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSG 70 (408)
Q Consensus 1 mKIlV~GD~HG~ld----------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g 70 (408)
++|+.++|+||.+. .+-..++++.++ +-++++.+||++......++. +...+-+..
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~---~~~l~l~~GD~~~gs~~~~~~------~g~~~~~~l----- 66 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL---DNDLLVDAGDAIQGLPISDLD------KGETIIKIM----- 66 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc---CCEEEEeCCCcCCCchhhhhc------CCcHHHHHH-----
Confidence 68999999999754 333334433322 468999999998643222111 111121112
Q ss_pred CCCCCccEEEEcCCCCCh---hhHHHHh---hCCccCCceEEec-------CceEEEEC-CEEEEeeccc
Q 015364 71 QEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLG-------FAGVVKFG-NIRIGGLSGI 126 (408)
Q Consensus 71 ~~~~pvpt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg-------~~gv~~i~-GlrIaGlsGi 126 (408)
..+.+ .+++.||||.. ..+.+.. .-.+++.|++... ..-+++.+ |+|||-+|-.
T Consensus 67 -n~~g~-d~~~~GNHefd~G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~ 134 (257)
T cd07408 67 -NAVGY-DAVTPGNHEFDYGLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLT 134 (257)
T ss_pred -HhcCC-cEEccccccccCCHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeec
Confidence 22333 34677999964 2232222 2247888998763 13455678 9999877654
No 64
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=97.88 E-value=0.00056 Score=67.56 Aligned_cols=221 Identities=15% Similarity=0.192 Sum_probs=109.0
Q ss_pred CEEEEEcCCCCChHH--------------HHHHHHHHHHhcCCCccEEEEecCccccCCc-chhccccchhhhHhhhHHH
Q 015364 1 MRIAVEGCMHGELDN--------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNE-NDMESLNVPRKYREMKSFW 65 (408)
Q Consensus 1 mKIlV~GD~HG~ld~--------------i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~-~dl~~l~~p~k~~~l~dF~ 65 (408)
++|+.++|+||.+.. +...++++.+++ +-.++|.+||++..... ..+. +-..+-+..
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~--~~~l~ld~GD~~~gs~~~s~~~------~g~~~~~~~ 72 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQN--PNSLFVSAGDLIGASPFESALL------QDEPTIEAL 72 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcC--CCeEEEeCCcccccccchhhcc------cCCcHHHHH
Confidence 589999999987642 444444443332 45699999998753221 1110 001111111
Q ss_pred HHhhCCCCCCccEEEEcCCCCCh---hhHHHHhh-------------------CCccCCceEEec-------CceEEEEC
Q 015364 66 KYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY-------------------GGWAAPNIYFLG-------FAGVVKFG 116 (408)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~-------------------gg~va~NI~yLg-------~~gv~~i~ 116 (408)
..+.+ -+++.||||.. ..|.+... -.+++.|+++-. ..-+++++
T Consensus 73 ------n~~g~-Da~t~GNHefd~G~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~ 145 (288)
T cd07412 73 ------NAMGV-DASAVGNHEFDEGYAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVG 145 (288)
T ss_pred ------HhhCC-eeeeecccccccCHHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEEC
Confidence 22333 35777999964 33443321 137888998643 33456789
Q ss_pred CEEEEeecccCCCccc--CCCCCCCCCCChhhhhhhhccchHHHHHHhccCCCcc--EEEeCCCCCCCccCCchhhhhhh
Q 015364 117 NIRIGGLSGIYNARHY--RLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPID--IFLSHDWPCGITDYGNCKELVRH 192 (408)
Q Consensus 117 GlrIaGlsGi~~~~~y--~~~~~e~~Py~~~~irs~yh~re~dv~kL~~~~~~vD--ILLTHdwP~gI~~~g~~~~L~~~ 192 (408)
|+|||-+|=......+ .....+..-|.. .+.++ +..+.+|.+ .++| |+|+|.--..-...++
T Consensus 146 G~kIgviGl~~~~~~~~~~~~~~~g~~f~d-~~e~~----~~~v~~lr~--~~~D~IIvL~H~G~~~~~~~~~------- 211 (288)
T cd07412 146 GVKVGFIGAVTKDTPNLVSPDGVAGLEFTD-EVEAI----NAVAPELKA--GGVDAIVVLAHEGGSTKGGDDT------- 211 (288)
T ss_pred CEEEEEEeecCCCccceeccccccCceEcC-HHHHH----HHHHHHHHH--CCCCEEEEEeCCCCCCCCCCcc-------
Confidence 9999877654322111 111111222221 11111 112334432 3455 5678954322111000
Q ss_pred cchhhhcccCCCCChHHHHHHHHHhCC--CEEEEcCCCCccceeeccCCCCCeeEEEeccccCCCCCeeEEEeccC
Q 015364 193 KQYFEKEIQDGTLGSEPAAQLLEKLKP--SYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (408)
Q Consensus 193 kp~f~~di~~~~lGS~~l~~Ll~~lkP--ry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~ 266 (408)
.....| ...+++.++.| ...++||.|..+..... ....|..+.- +..-+++-.++|..
T Consensus 212 --------~~~~~~--~~~~l~~~~~~~iD~IlgGHsH~~~~~~~~---~~~~~~v~q~---g~~g~~vg~i~l~~ 271 (288)
T cd07412 212 --------CSAASG--PIADIVNRLDPDVDVVFAGHTHQAYNCTVP---AGNPRLVTQA---GSYGKAVADVDLTI 271 (288)
T ss_pred --------ccccCh--hHHHHHhhcCCCCCEEEeCccCcccccccc---CcCCEEEEec---ChhhceeEEEEEEE
Confidence 001112 34566666644 78999999988764210 0113444333 34556777776643
No 65
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.85 E-value=2.2e-05 Score=75.88 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=46.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhc------CCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCC
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENIN------SYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA 74 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~------g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~ 74 (408)
||++|+||+||.++.+.+.++++.-.. ...-|.||++||+..-. ....+. .+|+.... .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRG-p~S~~v-------------l~~~~~~~-~ 65 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRG-PHSLRM-------------IEIVWELV-E 65 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCC-cChHHH-------------HHHHHHHh-h
Confidence 899999999999999887776543210 01348999999998532 222221 12221111 1
Q ss_pred CccEEEEcCCCCCh
Q 015364 75 PIPTIFIGGNHEAS 88 (408)
Q Consensus 75 pvpt~fI~GNHE~~ 88 (408)
+-..++|.||||..
T Consensus 66 ~~~~~~l~GNHE~~ 79 (245)
T PRK13625 66 KKAAYYVPGNHCNK 79 (245)
T ss_pred CCCEEEEeCccHHH
Confidence 23689999999854
No 66
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.79 E-value=3.2e-05 Score=73.45 Aligned_cols=66 Identities=30% Similarity=0.369 Sum_probs=44.5
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEE
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI 81 (408)
||+|+||+||+++++.+.++.+..+ ...|.+||+||+..-... ..++ .+++. . + .+++|
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~--~~~d~l~~lGD~vdrG~~-~~~~-------------l~~l~---~-~-~~~~v 74 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFC--PETDLLISVGDNIDRGPE-SLNV-------------LRLLN---Q-P-WFISV 74 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCC--CCCCEEEECCCCcCCCcC-HHHH-------------HHHHh---h-C-CcEEE
Confidence 7999999999999988766654211 258999999999763322 1111 22321 1 1 36799
Q ss_pred cCCCCCh
Q 015364 82 GGNHEAS 88 (408)
Q Consensus 82 ~GNHE~~ 88 (408)
.||||..
T Consensus 75 ~GNHE~~ 81 (218)
T PRK09968 75 KGNHEAM 81 (218)
T ss_pred ECchHHH
Confidence 9999864
No 67
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=97.78 E-value=0.00053 Score=67.43 Aligned_cols=190 Identities=18% Similarity=0.185 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEcCCCCChhh----
Q 015364 15 NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNY---- 90 (408)
Q Consensus 15 ~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~GNHE~~~~---- 90 (408)
.+-..++.+.+... ++|++|+.||+............ .+...+..+.+.+... -..+|++++.||||....
T Consensus 54 l~~s~l~~i~~~~~-~~dfii~tGD~v~h~~~~~~~~~---~~~~~~~~~~~~l~~~-~~~~pv~~~~GNHD~~p~~~~~ 128 (296)
T cd00842 54 LVESALEAIKKNHP-KPDFILWTGDLVRHDVDEQTPET---LVLISISNLTSLLKKA-FPDTPVYPALGNHDSYPVNQFP 128 (296)
T ss_pred HHHHHHHHHHHhCC-CCCEEEEcCCCCCCCchhhchhH---HHHHHHHHHHHHHHHh-CCCCCEEEcCCCCCCCcccccC
Confidence 33344555555443 79999999999865432211000 0000122333332211 145789999999998521
Q ss_pred -------HHHHh---hCCccCCc--eEEecCce--EEE-ECCEEEEeecccCCCcc--cCCCCCCCCCCChhhhhhhhcc
Q 015364 91 -------LWELY---YGGWAAPN--IYFLGFAG--VVK-FGNIRIGGLSGIYNARH--YRLGHYERPPYNESTIRSVYHV 153 (408)
Q Consensus 91 -------l~el~---~gg~va~N--I~yLg~~g--v~~-i~GlrIaGlsGi~~~~~--y~~~~~e~~Py~~~~irs~yh~ 153 (408)
+.+.. .+.|+-.+ -.+. .+| ++. .+|+||.+|...+-... +..+.....| ..+++-+
T Consensus 129 ~~~~~~~~~~~~~~~w~~~l~~~~~~~~~-~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~--~~Ql~WL--- 202 (296)
T cd00842 129 PNNSPSWLYDALAELWKSWLPEEAEETFK-KGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDP--AGQLQWL--- 202 (296)
T ss_pred CcccccHHHHHHHHHHHhhcCHHHHHHhh-cceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCH--HHHHHHH---
Confidence 11110 11111100 0111 112 234 58999998876542110 0000000001 1222222
Q ss_pred chHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhC--CCEEEEcCCCCcc
Q 015364 154 REYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLK--PSYWFSAHLHCKF 231 (408)
Q Consensus 154 re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lk--Pry~FsGH~H~~f 231 (408)
+..+++..+...+| |+++|-+|....... ....+..+.+|+++.+ ....|+||.|...
T Consensus 203 -~~~L~~a~~~~~~v-~I~~HiPp~~~~~~~------------------~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~ 262 (296)
T cd00842 203 -EDELQEAEQAGEKV-WIIGHIPPGVNSYDT------------------LENWSERYLQIINRYSDTIAGQFFGHTHRDE 262 (296)
T ss_pred -HHHHHHHHHCCCeE-EEEeccCCCCccccc------------------chHHHHHHHHHHHHHHHhhheeeecccccce
Confidence 11122221111233 788999886532210 0123567888999887 6789999999764
Q ss_pred ceee
Q 015364 232 AAVV 235 (408)
Q Consensus 232 ~~~~ 235 (408)
-...
T Consensus 263 ~~~~ 266 (296)
T cd00842 263 FRVF 266 (296)
T ss_pred EEEE
Confidence 4443
No 68
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=97.72 E-value=3.4e-05 Score=76.01 Aligned_cols=69 Identities=25% Similarity=0.265 Sum_probs=46.8
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|++.|+||+||.++++-+.++++.-. ...|.++++||+..-... .++. .+++... +...++
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~--~~~D~l~~lGDlVdRGP~-slev-------------L~~l~~l---~~~~~~ 61 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFD--PGQDTLWLTGDLVARGPG-SLEV-------------LRYVKSL---GDAVRL 61 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcC--CCCCEEEEeCCccCCCCC-HHHH-------------HHHHHhc---CCCeEE
Confidence 88999999999999988877766322 247999999999864322 2221 2232222 123568
Q ss_pred EcCCCCCh
Q 015364 81 IGGNHEAS 88 (408)
Q Consensus 81 I~GNHE~~ 88 (408)
|.||||..
T Consensus 62 VlGNHD~~ 69 (279)
T TIGR00668 62 VLGNHDLH 69 (279)
T ss_pred EEChhHHH
Confidence 99999864
No 69
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.70 E-value=0.0048 Score=61.92 Aligned_cols=119 Identities=18% Similarity=0.114 Sum_probs=64.0
Q ss_pred CEEEEEcCCCCChH------HHHHHHHHHHHhc---CCCccEEEEecCccccCCcchhc--cccchhhhHhhhHHHHHhh
Q 015364 1 MRIAVEGCMHGELD------NVYKTLQYMENIN---SYKIDLLLCCGDFQAVRNENDME--SLNVPRKYREMKSFWKYYS 69 (408)
Q Consensus 1 mKIlV~GD~HG~ld------~i~~~v~~l~~k~---g~~~DlLI~~GDf~~~~~~~dl~--~l~~p~k~~~l~dF~~y~~ 69 (408)
++|+-+.|+||.+. .+...++++.++. + +--+++-+||++......... .++...+-+.+-+++.+
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~-~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~-- 77 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEY-DNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNA-- 77 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccC-CCeEEEecCccccCchhhhhhccccccccCChHHHHHHhc--
Confidence 57999999999864 3333344443321 3 446999999976532111100 00001111223333333
Q ss_pred CCCCCCccEEEEcCCCCCh---hhHHHHhh---------CCccCCceEEec-----------------------CceEEE
Q 015364 70 GQEVAPIPTIFIGGNHEAS---NYLWELYY---------GGWAAPNIYFLG-----------------------FAGVVK 114 (408)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~---~~l~el~~---------gg~va~NI~yLg-----------------------~~gv~~ 114 (408)
+.+ =..+.||||.. ..|.++.. -.|++.||++-+ ..-+++
T Consensus 78 ----~g~-Da~tlGNHEFD~G~~~L~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~~~~~~~~~~~~~~~~~py~I~e 152 (313)
T cd08162 78 ----LGV-QAIALGNHEFDLGTDELADLIRPSAAGGGAAFPYLSANLDFSGDANLAGLATADGQQAAAIAGKIAKSTVVE 152 (313)
T ss_pred ----cCC-cEEeccccccccCHHHHHHHHHhhcccccCCCCEEEecccccCCcccccccccccccccccccccCCeEEEE
Confidence 111 25789999964 33333321 237888987532 223457
Q ss_pred ECCEEEEeecccC
Q 015364 115 FGNIRIGGLSGIY 127 (408)
Q Consensus 115 i~GlrIaGlsGi~ 127 (408)
++|+|||-+|-.-
T Consensus 153 ~~G~kIGviGltt 165 (313)
T cd08162 153 VGGEKIGVVGATT 165 (313)
T ss_pred ECCEEEEEEEecc
Confidence 7999998776543
No 70
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=97.69 E-value=6.5e-05 Score=73.32 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=45.2
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEc
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~ 82 (408)
+.|+||+||+++++-+.++++... .+.|.|+++||+..-... .++ ..+++.... -.+++|.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~--~~~D~Li~lGDlVdRGp~-s~e-------------vl~~l~~l~---~~v~~Vl 61 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFD--PAKDRLWLVGDLVNRGPD-SLE-------------TLRFVKSLG---DSAKTVL 61 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCC--CCCCEEEEecCcCCCCcC-HHH-------------HHHHHHhcC---CCeEEEc
Confidence 479999999999888777665322 247999999999864332 121 123332222 2578999
Q ss_pred CCCCCh
Q 015364 83 GNHEAS 88 (408)
Q Consensus 83 GNHE~~ 88 (408)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999875
No 71
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=97.66 E-value=7.8e-05 Score=69.91 Aligned_cols=68 Identities=26% Similarity=0.383 Sum_probs=44.6
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEcC
Q 015364 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (408)
Q Consensus 4 lV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~G 83 (408)
.|+||+||+++.+.+.++.+.. .+.|.+|++||+..-.... . ++-++... .+..|..+++|.|
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~---~~~d~li~lGD~vdrg~~~-~----------~~l~~l~~---~~~~~~~~~~l~G 63 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGF---PPNDKLIFLGDYVDRGPDS-V----------EVIDLLLA---LKILPDNVILLRG 63 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCC---CCCCEEEEECCEeCCCCCc-H----------HHHHHHHH---hcCCCCcEEEEcc
Confidence 3899999999888766654432 2679999999998643221 1 11122222 1212678999999
Q ss_pred CCCCh
Q 015364 84 NHEAS 88 (408)
Q Consensus 84 NHE~~ 88 (408)
|||..
T Consensus 64 NHe~~ 68 (225)
T cd00144 64 NHEDM 68 (225)
T ss_pred Cchhh
Confidence 99974
No 72
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.65 E-value=0.00014 Score=72.13 Aligned_cols=74 Identities=19% Similarity=0.320 Sum_probs=47.0
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcC---CCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCc-c
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINS---YKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI-P 77 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g---~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pv-p 77 (408)
+|+++||+||+++.+-+.++.+....+ ...+.+|++||+..-.... . +.-+|..- .....|. .
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS-~----------eVld~L~~--l~~~~~~~~ 69 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPET-R----------KVIDFLIS--LPEKHPKQR 69 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCH-H----------HHHHHHHH--hhhcccccc
Confidence 589999999999988887777765422 2467899999997533221 1 11122211 1222221 4
Q ss_pred EEEEcCCCCCh
Q 015364 78 TIFIGGNHEAS 88 (408)
Q Consensus 78 t~fI~GNHE~~ 88 (408)
++|+.||||..
T Consensus 70 vv~LrGNHE~~ 80 (304)
T cd07421 70 HVFLCGNHDFA 80 (304)
T ss_pred eEEEecCChHH
Confidence 68999999964
No 73
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.64 E-value=9.2e-05 Score=69.85 Aligned_cols=75 Identities=24% Similarity=0.193 Sum_probs=46.3
Q ss_pred EEEcCCCCChHHHHHHHHHHHHh-----cCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccE
Q 015364 4 AVEGCMHGELDNVYKTLQYMENI-----NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (408)
Q Consensus 4 lV~GD~HG~ld~i~~~v~~l~~k-----~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt 78 (408)
.|+||+||+++++-+.++.+.-. ...+.|.||++||+..-... ..+. +.-+.+......+.+.++
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~-~~~v---------l~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPD-VIEI---------LWLLYKLEQEAAKAGGKV 70 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcC-HHHH---------HHHHHHHHHHHHhcCCeE
Confidence 38999999999888776544210 01258999999999864322 1111 122222221123346688
Q ss_pred EEEcCCCCCh
Q 015364 79 IFIGGNHEAS 88 (408)
Q Consensus 79 ~fI~GNHE~~ 88 (408)
++|.||||..
T Consensus 71 ~~l~GNHE~~ 80 (208)
T cd07425 71 HFLLGNHELM 80 (208)
T ss_pred EEeeCCCcHH
Confidence 9999999965
No 74
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.62 E-value=0.00072 Score=72.76 Aligned_cols=110 Identities=17% Similarity=0.054 Sum_probs=62.6
Q ss_pred CEEEEEcCCCCChHH---------------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhH
Q 015364 1 MRIAVEGCMHGELDN---------------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYR 59 (408)
Q Consensus 1 mKIlV~GD~HG~ld~---------------------i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~ 59 (408)
+.|+-+.|+||.+.. +...++++.+++ +--+++-+||++.......+. +-+
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~--~n~l~ldaGD~~~gs~~~~~~------~g~ 72 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAES--KNALVLHAGDAIIGTLYFTLF------GGR 72 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhC--CCeEEEECCCCCCCccchhhc------CCH
Confidence 578999999998643 222233332222 456899999988643222110 011
Q ss_pred hhhHHHHHhhCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEe---------cCceEEEECCEEEEeec
Q 015364 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFL---------GFAGVVKFGNIRIGGLS 124 (408)
Q Consensus 60 ~l~dF~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~---gg~va~NI~yL---------g~~gv~~i~GlrIaGls 124 (408)
.+-++... +. .-.++.||||.. ..|.++.. -.|++.||++- ...-+++++|+|||-+|
T Consensus 73 ~~i~~~N~------~g-~Da~~lGNHEFd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiG 145 (550)
T TIGR01530 73 ADAALMNA------AG-FDFFTLGNHEFDAGNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIG 145 (550)
T ss_pred HHHHHHhc------cC-CCEEEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEE
Confidence 12222221 21 247889999975 23333322 23889998743 23455678999998765
Q ss_pred c
Q 015364 125 G 125 (408)
Q Consensus 125 G 125 (408)
=
T Consensus 146 l 146 (550)
T TIGR01530 146 L 146 (550)
T ss_pred e
Confidence 4
No 75
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.61 E-value=0.00011 Score=70.05 Aligned_cols=70 Identities=17% Similarity=0.139 Sum_probs=44.6
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcC-----CCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccE
Q 015364 4 AVEGCMHGELDNVYKTLQYMENINS-----YKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (408)
Q Consensus 4 lV~GD~HG~ld~i~~~v~~l~~k~g-----~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt 78 (408)
.|+||+||.++.+.+.++++..... .+.|.||++||+..-... ..+ ..+++..... +-.+
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~-S~~-------------vl~~l~~l~~-~~~~ 66 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPE-IRE-------------LLEIVKSMVD-AGHA 66 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCC-HHH-------------HHHHHHHhhc-CCCE
Confidence 5899999999999887776643211 146899999999753221 111 1223222222 2268
Q ss_pred EEEcCCCCCh
Q 015364 79 IFIGGNHEAS 88 (408)
Q Consensus 79 ~fI~GNHE~~ 88 (408)
++|.||||..
T Consensus 67 ~~l~GNHE~~ 76 (222)
T cd07413 67 LAVMGNHEFN 76 (222)
T ss_pred EEEEccCcHH
Confidence 8999999964
No 76
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=97.58 E-value=0.00071 Score=66.10 Aligned_cols=236 Identities=17% Similarity=0.190 Sum_probs=125.8
Q ss_pred CEEEEEcCCC--CChHHHH--HHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCc
Q 015364 1 MRIAVEGCMH--GELDNVY--KTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (408)
Q Consensus 1 mKIlV~GD~H--G~ld~i~--~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pv 76 (408)
++++|+||.- |.+++-. ..+..+-++. .+|++|-+||=+......+.. -| +=-..|...|+.-. +-.
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l--~idfvlS~GDNfYd~G~~~~~---Dp---~Fq~sF~nIYT~pS-LQk 114 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKL--DIDFVLSTGDNFYDTGLTSEN---DP---RFQDSFENIYTAPS-LQK 114 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhc--cceEEEecCCcccccCCCCCC---Ch---hHHhhhhhcccCcc-ccc
Confidence 4789999974 5555332 2233444444 499999999965432222111 01 11234655555422 445
Q ss_pred cEEEEcCCCCChhhHH-HH------hhCCccCCceEEecCceEEEECC--EEEEe---ecccCCC-cccCCCCCCCCCCC
Q 015364 77 PTIFIGGNHEASNYLW-EL------YYGGWAAPNIYFLGFAGVVKFGN--IRIGG---LSGIYNA-RHYRLGHYERPPYN 143 (408)
Q Consensus 77 pt~fI~GNHE~~~~l~-el------~~gg~va~NI~yLg~~gv~~i~G--lrIaG---lsGi~~~-~~y~~~~~e~~Py~ 143 (408)
|.|.|.||||-..-.. ++ ...-|+|+..||... .++.+.+ .++.. ++-.-+. .++ .+ ..|-
T Consensus 115 pWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rsf~~~a-e~ve~f~v~~~~f~~d~~~~~~~~~ydw-~~---v~PR- 188 (336)
T KOG2679|consen 115 PWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRSFYVDA-EIVEMFFVDTTPFMDDTFTLCTDDVYDW-RG---VLPR- 188 (336)
T ss_pred chhhhccCccccCchhhhhhHHHHhhccceecccHHhhcc-eeeeeeccccccchhhheeccccccccc-cc---CChH-
Confidence 8999999998763222 11 134599999998854 4555433 33322 2111110 111 11 1110
Q ss_pred hhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEE
Q 015364 144 ESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWF 223 (408)
Q Consensus 144 ~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~F 223 (408)
..=+++. .+..+ ..|.+-..+--|++-|-+=..+..+|+...| .+.+.-|+++.+=...+
T Consensus 189 ~~~~~~~--l~~le-~~L~~S~a~wkiVvGHh~i~S~~~HG~T~eL-----------------~~~LlPiL~~n~VdlY~ 248 (336)
T KOG2679|consen 189 VKYLRAL--LSWLE-VALKASRAKWKIVVGHHPIKSAGHHGPTKEL-----------------EKQLLPILEANGVDLYI 248 (336)
T ss_pred HHHHHHH--HHHHH-HHHHHhhcceEEEecccceehhhccCChHHH-----------------HHHHHHHHHhcCCcEEE
Confidence 0001111 01111 1233344567899999999999999987655 23477888888999999
Q ss_pred EcCCCCc-cceeeccCCCCCeeEEEeccccCCCCCeeE-EEeccCCCCCceeeeCHH
Q 015364 224 SAHLHCK-FAAVVQHGEDSPVTKFLALDKCLPRRKFLQ-VFEIESGQGPYEIQYDEE 278 (408)
Q Consensus 224 sGH~H~~-f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~-a~~i~~~~~~~~l~~d~e 278 (408)
+||-|+- +-... ...+.|+-=+--. +-|-- -.+=..+++.++++||-+
T Consensus 249 nGHDHcLQhis~~-----e~~iqf~tSGagS--kaw~g~~~~~~~~p~~lkF~Ydgq 298 (336)
T KOG2679|consen 249 NGHDHCLQHISSP-----ESGIQFVTSGAGS--KAWRGTDHNPEVNPKELKFYYDGQ 298 (336)
T ss_pred ecchhhhhhccCC-----CCCeeEEeeCCcc--cccCCCccCCccChhheEEeeCCC
Confidence 9998853 11111 2356776433211 11111 000012345677888876
No 77
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.57 E-value=0.0033 Score=61.17 Aligned_cols=111 Identities=17% Similarity=0.223 Sum_probs=59.1
Q ss_pred CEEEEEcCCCCChHH----------------------HHHHHHHHHHhcCCCccEE-EEecCccccCCcchhccccchhh
Q 015364 1 MRIAVEGCMHGELDN----------------------VYKTLQYMENINSYKIDLL-LCCGDFQAVRNENDMESLNVPRK 57 (408)
Q Consensus 1 mKIlV~GD~HG~ld~----------------------i~~~v~~l~~k~g~~~DlL-I~~GDf~~~~~~~dl~~l~~p~k 57 (408)
+.|+.++|+||.+.. +...++++.++. ..|+| +.+||++.......+. +
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~--~~~~l~l~~GD~~~gs~~~~~~------~ 72 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAER--NPNTLLLDGGDTWQGSGEALYT------R 72 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhc--CCCeEEEeCCCccCCChHHhhc------C
Confidence 478999999997533 222233332221 36777 4599998643222111 1
Q ss_pred hHhhhHHHHHhhCCCCCCccEEEEcCCCCCh---hhHHHHh---hCCccCCceEEecC-------ceEEEECCEEEEeec
Q 015364 58 YREMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLGF-------AGVVKFGNIRIGGLS 124 (408)
Q Consensus 58 ~~~l~dF~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg~-------~gv~~i~GlrIaGls 124 (408)
...+-++. ..+++- ++. ||||.. ..+..+. .-.+++.|+++-.. .-+++.+|+|||-+|
T Consensus 73 g~~~~~~l------~~~g~d-a~~-GNHefd~g~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG 144 (264)
T cd07411 73 GQAMVDAL------NALGVD-AMV-GHWEFTYGPERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIG 144 (264)
T ss_pred ChhHHHHH------HhhCCe-EEe-cccccccCHHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEE
Confidence 11222222 223322 334 999965 2222222 12378889876431 234577999998776
Q ss_pred ccC
Q 015364 125 GIY 127 (408)
Q Consensus 125 Gi~ 127 (408)
-..
T Consensus 145 ~~~ 147 (264)
T cd07411 145 QTF 147 (264)
T ss_pred ecc
Confidence 543
No 78
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.56 E-value=0.0061 Score=60.18 Aligned_cols=113 Identities=18% Similarity=0.118 Sum_probs=63.4
Q ss_pred CEEEEEcCCCCChHH----------HHHHHHHHHHh---cCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHH
Q 015364 1 MRIAVEGCMHGELDN----------VYKTLQYMENI---NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (408)
Q Consensus 1 mKIlV~GD~HG~ld~----------i~~~v~~l~~k---~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y 67 (408)
++|+.++|+||.+.. +-..++++.++ .+ +--+++-+||++......++.. ...+-++...
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~-~~~l~ld~GD~~~Gs~~~~~~~------g~~~~~~~n~ 73 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQG-GYVLLLSGGDINTGVPESDLQD------AEPDFRGMNL 73 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccC-CCEEEEeCCCcCCCchhHHhcC------cchHHHHHHh
Confidence 579999999997633 33334444322 13 4569999999875432222110 0112222222
Q ss_pred hhCCCCCCccEEEEcCCCCCh---hhHHHHhh---CCccCCceEEec------CceEEEECCEEEEeecccC
Q 015364 68 YSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG------FAGVVKFGNIRIGGLSGIY 127 (408)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg------~~gv~~i~GlrIaGlsGi~ 127 (408)
+.+- ..+.||||.. ..|.+... -.+++.|+++-. ..-+++++|+|||-+|-..
T Consensus 74 ------~g~D-a~~~GNHEfD~G~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~ 138 (285)
T cd07405 74 ------VGYD-AMAVGNHEFDNPLEVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTT 138 (285)
T ss_pred ------hCCc-EEeecccccccCHHHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecc
Confidence 3333 4455999975 23333221 247899998752 2245577999998776544
No 79
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.48 E-value=0.0023 Score=74.70 Aligned_cols=191 Identities=22% Similarity=0.227 Sum_probs=97.5
Q ss_pred CEEEEEcCCCCCh---HHHHHHHHHHHHhcCCCccEEEE-ecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCc
Q 015364 1 MRIAVEGCMHGEL---DNVYKTLQYMENINSYKIDLLLC-CGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (408)
Q Consensus 1 mKIlV~GD~HG~l---d~i~~~v~~l~~k~g~~~DlLI~-~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pv 76 (408)
++|+.++|+||.+ ..+...++++.++ ..|+|++ +||++.......+ .+...+-++... +.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~---~~~~l~ld~GD~~~gs~~~~~------~~g~~~~~~ln~------lg- 724 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEE---NPNTILVDAGDVYQGSLYSNL------LKGLPVLKMMKE------MG- 724 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhh---CCCeEEEecCCCCCCcchhhh------cCChHHHHHHhC------cC-
Confidence 4799999999875 4444555554433 3476766 9998764321111 011222222222 22
Q ss_pred cEEEEcCCCCCh---hhHHHHhh--C-------------CccCCceEEec---------CceEEEECCEEEEeecccCCC
Q 015364 77 PTIFIGGNHEAS---NYLWELYY--G-------------GWAAPNIYFLG---------FAGVVKFGNIRIGGLSGIYNA 129 (408)
Q Consensus 77 pt~fI~GNHE~~---~~l~el~~--g-------------g~va~NI~yLg---------~~gv~~i~GlrIaGlsGi~~~ 129 (408)
.-+++.||||.. ..+.+... + .+++.||++-. ..-|++++|+|||.+|=+-..
T Consensus 725 ~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~ 804 (1163)
T PRK09419 725 YDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPE 804 (1163)
T ss_pred CCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccc
Confidence 236689999963 22333221 1 37889998632 234557799999877654322
Q ss_pred cccC-C-CCCCCCCCChhhhhhhhccchHHHHHHhccCCCcc--EEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCC
Q 015364 130 RHYR-L-GHYERPPYNESTIRSVYHVREYDVHKLMQIEEPID--IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTL 205 (408)
Q Consensus 130 ~~y~-~-~~~e~~Py~~~~irs~yh~re~dv~kL~~~~~~vD--ILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~l 205 (408)
.... . ......-|.. .+.++ +..+..|.. ..++| |+|||..-.. + . ..
T Consensus 805 ~~~~~~p~~~~~l~f~d-~~e~~----~~~v~~Lr~-~~~~D~VV~LsH~G~~~--d-~-------------------~~ 856 (1163)
T PRK09419 805 TAYKTSPGNVKNLEFKD-PAEAA----KKWVKELKE-KEKVDAIIALTHLGSNQ--D-R-------------------TT 856 (1163)
T ss_pred cccccCCCCcCCcEEcC-HHHHH----HHHHHHHHh-hcCCCEEEEEecCCccc--c-c-------------------cc
Confidence 1111 1 0111222321 11111 111333431 13455 6889975321 0 0 01
Q ss_pred ChHHHHHHHHHhC-CCEEEEcCCCCccceee
Q 015364 206 GSEPAAQLLEKLK-PSYWFSAHLHCKFAAVV 235 (408)
Q Consensus 206 GS~~l~~Ll~~lk-Pry~FsGH~H~~f~~~~ 235 (408)
|.-.+.+|++++. -...+.||.|..+...+
T Consensus 857 ~~~~~~~lA~~v~gIDvIigGHsH~~~~~~v 887 (1163)
T PRK09419 857 GEITGLELAKKVKGVDAIISAHTHTLVDKVV 887 (1163)
T ss_pred cccHHHHHHHhCCCCCEEEeCCCCccccccC
Confidence 1112456666653 45799999998876543
No 80
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=97.39 E-value=0.0023 Score=66.64 Aligned_cols=188 Identities=20% Similarity=0.213 Sum_probs=101.4
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEE
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI 81 (408)
+++|.||.--.-.. ........++. ++|++|++|||.-...... + .-.+|.+..... .+-+|..++
T Consensus 149 ~~~i~GDlG~~~~~--~s~~~~~~~~~-k~d~vlhiGDlsYa~~~~n-------~---~wD~f~r~vEp~-As~vPymv~ 214 (452)
T KOG1378|consen 149 RAAIFGDMGCTEPY--TSTLRNQEENL-KPDAVLHIGDLSYAMGYSN-------W---QWDEFGRQVEPI-ASYVPYMVC 214 (452)
T ss_pred eEEEEccccccccc--cchHhHHhccc-CCcEEEEecchhhcCCCCc-------c---chHHHHhhhhhh-hccCceEEe
Confidence 68899987543221 11122233333 6999999999975332211 1 123344443332 355899999
Q ss_pred cCCCCChhh----HHH----H--h-hCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhh
Q 015364 82 GGNHEASNY----LWE----L--Y-YGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSV 150 (408)
Q Consensus 82 ~GNHE~~~~----l~e----l--~-~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~ 150 (408)
.||||-... +.. . + .+++-..|+||- +.+++++|.++|.-. +| +. .++. .-
T Consensus 215 ~GNHE~d~~~~~~F~~y~~Rf~mP~~~s~s~~~l~YS-----fd~G~vhfv~lsse~---~~--~~---~~~~-----~Q 276 (452)
T KOG1378|consen 215 SGNHEIDWPPQPCFVPYSARFNMPGNSSESDSNLYYS-----FDVGGVHFVVLSTET---YY--NF---LKGT-----AQ 276 (452)
T ss_pred cccccccCCCcccccccceeeccCCCcCCCCCceeEE-----EeeccEEEEEEeccc---cc--cc---cccc-----hH
Confidence 999987532 111 0 0 112323357763 578999999987532 22 10 1111 11
Q ss_pred hccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCCh--HHHHHHHHHhCCCEEEEcCCC
Q 015364 151 YHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGS--EPAAQLLEKLKPSYWFSAHLH 228 (408)
Q Consensus 151 yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS--~~l~~Ll~~lkPry~FsGH~H 228 (408)
|.-=+.|+.+..+.+.+=-|++-|-+=..-.... +. ..+...+ ..+.+|+-+.+=...|+||.|
T Consensus 277 Y~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~----------~~----reG~~~~~~~~LE~l~~~~~VDvvf~GHvH 342 (452)
T KOG1378|consen 277 YQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDA----------HY----REGEFESMREGLEPLFVKYKVDVVFWGHVH 342 (452)
T ss_pred HHHHHHHHHHhcccCCCeEEEEecccceecCCch----------hh----ccCcchhhHHHHHHHHHHhceeEEEeccce
Confidence 2212344444433324667777776543332200 11 1122222 369999999999999999999
Q ss_pred --Cccceee
Q 015364 229 --CKFAAVV 235 (408)
Q Consensus 229 --~~f~~~~ 235 (408)
+++.+..
T Consensus 343 ~YER~~piy 351 (452)
T KOG1378|consen 343 RYERFCPIY 351 (452)
T ss_pred ehhccchhh
Confidence 3344443
No 81
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.32 E-value=0.0045 Score=66.03 Aligned_cols=112 Identities=21% Similarity=0.207 Sum_probs=67.2
Q ss_pred CEEEEEcCCCCChH---------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHH
Q 015364 1 MRIAVEGCMHGELD---------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (408)
Q Consensus 1 mKIlV~GD~HG~ld---------------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~ 65 (408)
++|+-+.|+||.+. .+...++++.++. +-.++|-+||+.......+.. .+...+-++.
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~--~~~llld~GD~~~G~~l~~~~-----~~g~~~~~~m 99 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAEN--KNVLLLDAGDLIQGSPLSDYL-----TKGEPTVDLL 99 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhc--CCeEEEeCCcccCCccccccc-----cCCChHHHHH
Confidence 47899999999998 5555555554443 467899999987653322210 0111122222
Q ss_pred HHhhCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEe--------cCceEEEECCEEEEeeccc
Q 015364 66 KYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFL--------GFAGVVKFGNIRIGGLSGI 126 (408)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yL--------g~~gv~~i~GlrIaGlsGi 126 (408)
..+++ -+...||||.. ..|..+..+ .|++.||+.= ...-+++++|+|||.+|=.
T Consensus 100 ------N~m~y-Da~tiGNHEFd~g~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~ 167 (517)
T COG0737 100 ------NALGY-DAMTLGNHEFDYGLEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLT 167 (517)
T ss_pred ------hhcCC-cEEeecccccccCHHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEec
Confidence 22333 35666799986 334444322 3889999876 1234557799999877633
No 82
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.30 E-value=0.00086 Score=60.85 Aligned_cols=97 Identities=16% Similarity=0.009 Sum_probs=54.1
Q ss_pred EEEcCCCCChHHHHH---------------HHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHh
Q 015364 4 AVEGCMHGELDNVYK---------------TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (408)
Q Consensus 4 lV~GD~HG~ld~i~~---------------~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~ 68 (408)
.+++|+|-....+.+ .++.+++.-. +.|.||+|||+........ + .+++
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~d~vi~~GDl~~~~~~~~---------~------~~~l 65 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVG-PDDTVYHLGDFSFGGKAGT---------E------LELL 65 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcC-CCCEEEEeCCCCCCCChHH---------H------HHHH
Confidence 578999976654432 2444444433 6899999999986432111 1 2222
Q ss_pred hCCCCCCccEEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEee
Q 015364 69 SGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGL 123 (408)
Q Consensus 69 ~g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGl 123 (408)
...+.++++|.||||......... .... ..++.....++++|.+|.-.
T Consensus 66 ---~~~~~~~~~v~GNHD~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~i~l~ 113 (168)
T cd07390 66 ---SRLNGRKHLIKGNHDSSLERKLLA--FLLK--FESVLQAVRLKIGGRRVYLS 113 (168)
T ss_pred ---HhCCCCeEEEeCCCCchhhhcccc--cccc--cceeeeEEEEEECCEEEEEE
Confidence 223468999999999753221110 0000 11233344556778887754
No 83
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.26 E-value=0.0073 Score=59.09 Aligned_cols=220 Identities=10% Similarity=0.119 Sum_probs=110.9
Q ss_pred EEEEEcCCC-CCh----HHHHHHHHHHHHhcC--------CCccEEEEecCccccCCc-chhcccc-------chhhhHh
Q 015364 2 RIAVEGCMH-GEL----DNVYKTLQYMENINS--------YKIDLLLCCGDFQAVRNE-NDMESLN-------VPRKYRE 60 (408)
Q Consensus 2 KIlV~GD~H-G~l----d~i~~~v~~l~~k~g--------~~~DlLI~~GDf~~~~~~-~dl~~l~-------~p~k~~~ 60 (408)
+|++++++| |+- .++-..++-+.-..| .++.-||+|||....-.. .+..... --..+..
T Consensus 1 ~i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T cd07387 1 YIALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEA 80 (257)
T ss_pred CEEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHH
Confidence 488999999 432 121111222222111 145679999998753221 1100000 0011333
Q ss_pred hhHHHHHhhCCCCCCccEEEEcCCCCChhhHHHH------hh-CCccCCceEEecCceEEEECCEEEEeecccCCCcccC
Q 015364 61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWEL------YY-GGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYR 133 (408)
Q Consensus 61 l~dF~~y~~g~~~~pvpt~fI~GNHE~~~~l~el------~~-gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~ 133 (408)
+..|-.|++... ..+|+..++||||..+..... .+ ...-..|+..+..-..++++|+||.|.||-- -.|..
T Consensus 81 ~~~ld~~l~~l~-~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqn-i~Di~ 158 (257)
T cd07387 81 VKELDNFLSQLA-SSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQN-VDDIL 158 (257)
T ss_pred HHHHHHHHHhhh-cCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCCcEEeCCCeEEEECCEEEEEECCCC-HHHHH
Confidence 444455544443 357999999999998664321 11 1112246777777677889999999999952 12221
Q ss_pred CCCCCCCCCChhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHH
Q 015364 134 LGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQL 213 (408)
Q Consensus 134 ~~~~e~~Py~~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~L 213 (408)
+ ..+++. .+ .-++.+++.+ |-.|..-....-. ....++||.
T Consensus 159 k----y~~~~~-~l--------~~me~~L~wr--------HlaPTaPDTL~~y-P~~~~Dpfv----------------- 199 (257)
T cd07387 159 K----YSSLES-RL--------DILERTLKWR--------HIAPTAPDTLWCY-PFTDRDPFI----------------- 199 (257)
T ss_pred H----hCCCCC-HH--------HHHHHHHHhc--------ccCCCCCCccccc-cCCCCCcee-----------------
Confidence 1 112211 00 0022222221 3333221110000 000112332
Q ss_pred HHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEeccccCCCCCeeEEEecc
Q 015364 214 LEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (408)
Q Consensus 214 l~~lkPry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~ 265 (408)
-.--|...|+||.|..-...+.. +.++.+|-|++.++ ++-.-+-.+++.
T Consensus 200 -i~~~PhVyf~Gnq~~f~t~~~~~-~~~~~v~lv~vP~F-s~t~~~vlvdl~ 248 (257)
T cd07387 200 -LEECPHVYFAGNQPKFGTKLVEG-EEGQRVLLVCVPSF-SKTGTAVLVNLR 248 (257)
T ss_pred -ecCCCCEEEeCCCcceeeeEEEc-CCCCeEEEEEeCCc-CcCCEEEEEECC
Confidence 12259999999998765555554 34567999999887 344445555553
No 84
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=97.26 E-value=0.013 Score=60.46 Aligned_cols=189 Identities=17% Similarity=0.145 Sum_probs=100.7
Q ss_pred CEEEEEcCCCCChH---HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCC-CCCc
Q 015364 1 MRIAVEGCMHGELD---NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQE-VAPI 76 (408)
Q Consensus 1 mKIlV~GD~HG~ld---~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~-~~pv 76 (408)
++++++||.-+.-. .+-+.+.++.++. ++|++|-+||-+ .....+. ..| +=...|.+-|+... ...+
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~--~~~FVls~GDNF-~~Gv~sv---~Dp---~f~~~FE~vY~~~s~~L~~ 97 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNE--RVTFLVSPGSNF-PGGVDGL---NDP---KWKHCFENVYSEESGDMQI 97 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhC--CCCEEEECCccc-cCCCCCc---cch---hHHhhHhhhccCcchhhCC
Confidence 47899999765422 2334455555543 699999999976 3211111 111 11234777776653 2678
Q ss_pred cEEEEcCCCCChhh-HHHH-----------------------hhCCccCCceEEecCceEE--------EE--CC--EEE
Q 015364 77 PTIFIGGNHEASNY-LWEL-----------------------YYGGWAAPNIYFLGFAGVV--------KF--GN--IRI 120 (408)
Q Consensus 77 pt~fI~GNHE~~~~-l~el-----------------------~~gg~va~NI~yLg~~gv~--------~i--~G--lrI 120 (408)
|.|.|.||||-..- -.++ .+..|..||-||--..... +. .+ +.|
T Consensus 98 Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~f 177 (394)
T PTZ00422 98 PFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAF 177 (394)
T ss_pred CeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEE
Confidence 99999999986311 1111 1235888987773211100 01 11 122
Q ss_pred EeecccCCCcccCCCCCCCCCCC---hhhhhhhhccchHHHHHHhccC--CCccEEEeCCCCCCCccCCchhhhhhhcch
Q 015364 121 GGLSGIYNARHYRLGHYERPPYN---ESTIRSVYHVREYDVHKLMQIE--EPIDIFLSHDWPCGITDYGNCKELVRHKQY 195 (408)
Q Consensus 121 aGlsGi~~~~~y~~~~~e~~Py~---~~~irs~yh~re~dv~kL~~~~--~~vDILLTHdwP~gI~~~g~~~~L~~~kp~ 195 (408)
..+=-. .+. ...||. ..+.+.+ .+.|.... .+-=|++-|-+-.....+++...|
T Consensus 178 ifiDT~----~l~----~~~~~~~~~~~~w~~L-------~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~~~L------ 236 (394)
T PTZ00422 178 IFIDTW----ILS----SSFPYKKVSERAWQDL-------KATLEYAPKIADYIIVVGDKPIYSSGSSKGDSYL------ 236 (394)
T ss_pred EEEECc----hhc----ccCCccccCHHHHHHH-------HHHHHhhccCCCeEEEEecCceeecCCCCCCHHH------
Confidence 222110 000 011221 1111111 11221112 245689999999887765543222
Q ss_pred hhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCc
Q 015364 196 FEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCK 230 (408)
Q Consensus 196 f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~ 230 (408)
...+..|+++.+=...+|||-|+.
T Consensus 237 -----------~~~L~PLL~ky~VdlYisGHDH~l 260 (394)
T PTZ00422 237 -----------SYYLLPLLKDAQVDLYISGYDRNM 260 (394)
T ss_pred -----------HHHHHHHHHHcCcCEEEEccccce
Confidence 124778889999999999999965
No 85
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=97.17 E-value=0.0085 Score=62.79 Aligned_cols=217 Identities=16% Similarity=0.242 Sum_probs=115.8
Q ss_pred CEEEEEcCCCCCh----HHHHH-HHHHHHHhcCCC------ccEEEEecCccc-----cCCcchhccccchhhhHhhhHH
Q 015364 1 MRIAVEGCMHGEL----DNVYK-TLQYMENINSYK------IDLLLCCGDFQA-----VRNENDMESLNVPRKYREMKSF 64 (408)
Q Consensus 1 mKIlV~GD~HG~l----d~i~~-~v~~l~~k~g~~------~DlLI~~GDf~~-----~~~~~dl~~l~~p~k~~~l~dF 64 (408)
+++++++|+|=.- ...|. .+.-+ +| + +.++||+||.-. .....++.-...+.-|.++..|
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl---~g-~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~ 301 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWL---NG-PGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEF 301 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHh---cC-CcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHH
Confidence 3689999999622 22222 22222 33 4 489999999753 2344555444444555555544
Q ss_pred HHHhhCCCCCCccEEEEcCCCCChhhHHHHh------hCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCC
Q 015364 65 WKYYSGQEVAPIPTIFIGGNHEASNYLWELY------YGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYE 138 (408)
Q Consensus 65 ~~y~~g~~~~pvpt~fI~GNHE~~~~l~el~------~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e 138 (408)
..- . --.+.++.+|||||+.......+ ..-....|+.+++.-..+.++|..+...+|..- .|...-
T Consensus 302 L~~---v-p~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG~si-dDii~~--- 373 (481)
T COG1311 302 LDQ---V-PEHIKVFIMPGNHDAVRQALPQPHFPELIKSLFSLNNLLFVSNPALVSLHGVDVLIYHGRSI-DDIIKL--- 373 (481)
T ss_pred Hhh---C-CCCceEEEecCCCCccccccCCCCcchhhcccccccceEecCCCcEEEECCEEEEEecCCCH-HHHHhh---
Confidence 433 2 22356789999999874321111 111234568889888888999999987777421 111100
Q ss_pred CCCCChhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhC
Q 015364 139 RPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLK 218 (408)
Q Consensus 139 ~~Py~~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lk 218 (408)
-+.-+.+.. ...++.|+..+ |-.|. +|+.-++. | ..-+-++-.-.
T Consensus 374 vP~~~~~~~-------~~ame~lLk~r--------HlaPt----ygg~~p~a---P-------------~~kD~lVIeev 418 (481)
T COG1311 374 VPGADYDSP-------LKAMEELLKRR--------HLAPT----YGGTLPIA---P-------------ETKDYLVIEEV 418 (481)
T ss_pred CCCCCccch-------HHHHHHHHHhc--------ccCCC----CCCccccc---c-------------CCcCceeeccC
Confidence 011010000 11122232221 22221 22211110 1 01234455557
Q ss_pred CCEEEEcCCCCccceeeccCCCCCeeEEEeccccCCCCCeeEEEeccCCCCC
Q 015364 219 PSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGP 270 (408)
Q Consensus 219 Pry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~~~~~ 270 (408)
|.+..+||.|...-..+.. -+-++++.+-...+|=-.++|.+.++.
T Consensus 419 PDv~~~Ghvh~~g~~~y~g------v~~vns~T~q~qTefqk~vni~p~~~~ 464 (481)
T COG1311 419 PDVFHTGHVHKFGTGVYEG------VNLVNSGTWQEQTEFQKMVNINPTPGN 464 (481)
T ss_pred CcEEEEccccccceeEEec------cceEEeeeecchhccceEEEecCcccc
Confidence 9999999999877666542 466677766666667777777665443
No 86
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=97.14 E-value=0.033 Score=58.87 Aligned_cols=56 Identities=13% Similarity=0.159 Sum_probs=32.7
Q ss_pred CCCccEEEeCCCCCCCccC-CchhhhhhhcchhhhcccCCCCChHHHHHHHHHh-CCCEEEEcCCCCcc
Q 015364 165 EEPIDIFLSHDWPCGITDY-GNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLHCKF 231 (408)
Q Consensus 165 ~~~vDILLTHdwP~gI~~~-g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~l-kPry~FsGH~H~~f 231 (408)
..+.=|+++|-+|..+... .+ ++.. .........+.++++.. +-+.|||||.|...
T Consensus 336 ~~k~VVVf~HHPp~s~g~~~~D--------p~~p---g~~~~n~~eLldLL~~ypnV~aVfsGHvH~n~ 393 (496)
T TIGR03767 336 SDTLFVLFSHHTSWSMVNELTD--------PVDP---GEKRHLGTELVSLLLEHPNVLAWVNGHTHSNK 393 (496)
T ss_pred CCCCEEEEECCCCccccccccc--------cccc---cccccCHHHHHHHHhcCCCceEEEECCcCCCc
Confidence 3455789999988654221 01 0000 01122345677777776 56789999999765
No 87
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.14 E-value=0.012 Score=63.35 Aligned_cols=112 Identities=17% Similarity=0.115 Sum_probs=62.5
Q ss_pred CEEEEEcCCCCChHH----------HHHHHHHHHHh---cCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHH
Q 015364 1 MRIAVEGCMHGELDN----------VYKTLQYMENI---NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (408)
Q Consensus 1 mKIlV~GD~HG~ld~----------i~~~v~~l~~k---~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y 67 (408)
+.|+-++|+||.+.. +-..++++.++ .+ +--+++-+||++......++. +-+.+-++..
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~-~~~l~ldaGD~~~Gs~~s~~~------~g~~~i~~mN- 106 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEG-GSVLLLSGGDINTGVPESDLQ------DAEPDFRGMN- 106 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccC-CCEEEEcCCccccceEhhhhc------CCchhHHHHh-
Confidence 468999999998742 12223332221 13 456899999997643222211 0011222222
Q ss_pred hhCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEec-------CceEEEECCEEEEeeccc
Q 015364 68 YSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG-------FAGVVKFGNIRIGGLSGI 126 (408)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg-------~~gv~~i~GlrIaGlsGi 126 (408)
.+.+- .++.||||.. ..|.++... .|++.||++-. ..-+++++|+|||.+|=.
T Consensus 107 -----~~g~D-a~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~ 172 (551)
T PRK09558 107 -----LIGYD-AMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLT 172 (551)
T ss_pred -----cCCCC-EEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEe
Confidence 23333 4566999975 334443322 48899998642 233457799999987644
No 88
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.04 E-value=0.0017 Score=59.07 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=41.1
Q ss_pred EEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHH
Q 015364 4 AVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (408)
Q Consensus 4 lV~GD~HG~ld----------------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y 67 (408)
|+++|+|=... .+++++.++-++. ++|.||++||++....... +.....+.
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~--~~d~lii~GDl~~~~~~~~---------~~~~~~~~-- 67 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEY--GPERLIILGDLKHSFGGLS---------RQEFEEVA-- 67 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhc--CCCEEEEeCcccccccccC---------HHHHHHHH--
Confidence 57888885443 2334444443333 5899999999985332111 11111111
Q ss_pred hhCCCCCCccEEEEcCCCCCh
Q 015364 68 YSGQEVAPIPTIFIGGNHEAS 88 (408)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~ 88 (408)
........+++++|.||||..
T Consensus 68 ~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 68 FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHhccCCCeEEEEcccCccc
Confidence 111234567999999999864
No 89
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=96.96 E-value=0.0016 Score=64.01 Aligned_cols=72 Identities=18% Similarity=0.293 Sum_probs=46.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
+++.|+||+||+++.+.+.++.... .+.+-++++||+..-. ...++.+ .+...+ ....|-.++.
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~---~~~~~~vfLGD~VDrG-~~s~e~l----------~~l~~l--k~~~p~~v~l 91 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGP---PPDTNYVFLGDYVDRG-PFSIEVI----------LLLFAL--KILYPNRVVL 91 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCC---CCCceEEEeCCccCCC-CChHHHH----------HHHHHH--HhcCCCCEEE
Confidence 4789999999999988766543311 2578999999998532 2222222 111111 2234556899
Q ss_pred EcCCCCCh
Q 015364 81 IGGNHEAS 88 (408)
Q Consensus 81 I~GNHE~~ 88 (408)
+-||||..
T Consensus 92 lrGNHE~~ 99 (271)
T smart00156 92 LRGNHESR 99 (271)
T ss_pred EeccccHH
Confidence 99999986
No 90
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.96 E-value=0.0023 Score=61.32 Aligned_cols=71 Identities=21% Similarity=0.293 Sum_probs=42.1
Q ss_pred EEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHH
Q 015364 2 RIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (408)
Q Consensus 2 KIlV~GD~HG~ld----------------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~ 65 (408)
+.||++|+|=..+ ++.+++..+-++. ++|.||++||++...... ..++++.+|.
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~--~~d~vIi~GDl~h~~~~~--------~~~~~~~~~l 85 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKY--GIEALIINGDLKHEFKKG--------LEWRFIREFI 85 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhc--CCCEEEEcCccccccCCh--------HHHHHHHHHH
Confidence 5799999994322 2333333333333 599999999998543211 1133333333
Q ss_pred HHhhCCCCCCccEEEEcCCCCCh
Q 015364 66 KYYSGQEVAPIPTIFIGGNHEAS 88 (408)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~ 88 (408)
+- ...++++|.||||..
T Consensus 86 ~~------~~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 86 EV------TFRDLILIRGNHDAL 102 (225)
T ss_pred Hh------cCCcEEEECCCCCCc
Confidence 22 234899999999864
No 91
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=96.96 E-value=0.0018 Score=65.31 Aligned_cols=60 Identities=15% Similarity=0.147 Sum_probs=42.1
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCCCC--ccceeeccCCCCCeeEEEeccccCCCCCeeEEEeccC
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~H~--~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~ 266 (408)
.-|..++.+.+++.+=++.+=||--+ .|.. .| +..-.|-|=|-.-|+.....-.++.|+.
T Consensus 250 ~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~--~~-~~~~iTvFSa~nY~~~~~N~gavl~i~~ 311 (321)
T cd07420 250 YFGPDVTSKVLQKHGLSLLIRSHECKPEGYEF--CH-NNKVITIFSASNYYEEGSNRGAYIKLGP 311 (321)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChhhhcceEE--ec-CCeEEEEecCCccCCCCCccEEEEEECC
Confidence 45889999999999999999999643 3332 23 3345788888887775444455555644
No 92
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.92 E-value=0.027 Score=63.08 Aligned_cols=120 Identities=18% Similarity=0.176 Sum_probs=61.3
Q ss_pred CEEEEEcCCCCChHH----------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccc-----hhhhH
Q 015364 1 MRIAVEGCMHGELDN----------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNV-----PRKYR 59 (408)
Q Consensus 1 mKIlV~GD~HG~ld~----------------i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~-----p~k~~ 59 (408)
++|+-+.|+||.+.. +-..|+++.+++ +--+||-+||+.......++..-.. |.+-.
T Consensus 40 L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~--~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 40 LRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEA--KNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred EEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhC--CCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 479999999998632 222233332222 4469999999875432222110000 00000
Q ss_pred hhhHHHHHhhCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEec-------------CceEEEE-----
Q 015364 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG-------------FAGVVKF----- 115 (408)
Q Consensus 60 ~l~dF~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg-------------~~gv~~i----- 115 (408)
...-..+.+ ..+. .-.+..||||.- .+|.+...+ -+|+.||+.-. ..-|++.
T Consensus 118 ~~~p~i~~m---N~lg-yDa~tlGNHEFdyG~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~~~~~~~PY~I~e~~v~~~ 193 (780)
T PRK09418 118 YTHPLYRLM---NLMK-YDVISLGNHEFNYGLDYLNKVISKTEFPVINSNVYKDDKDNNEENDQNYFKPYHVFEKEVEDE 193 (780)
T ss_pred cchHHHHHH---hccC-CCEEeccccccccCHHHHHHHHhhCCCCEEEeeeecccccccccccccccCCEEEEEeeeccc
Confidence 000111121 1121 236789999954 334444322 38999998532 2223333
Q ss_pred ----CCEEEEeeccc
Q 015364 116 ----GNIRIGGLSGI 126 (408)
Q Consensus 116 ----~GlrIaGlsGi 126 (408)
+|+|||.+|-.
T Consensus 194 ~G~~~gvKIGiIGlt 208 (780)
T PRK09418 194 SGQKQKVKIGVMGFV 208 (780)
T ss_pred ccccCCceEEEEEec
Confidence 58999988754
No 93
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=96.76 E-value=0.0027 Score=63.53 Aligned_cols=71 Identities=21% Similarity=0.300 Sum_probs=45.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEE
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI 81 (408)
+|.|+||+||++..+.+.++.. ...+.+-+|++||+..-. ...++.+ ...+.-....|--++.+
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~---g~~~~~~ylFLGDyVDRG-~~s~Evi------------~lL~~lki~~p~~v~lL 107 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVG---GSPANTRYLFLGDYVDRG-YFSIECV------------LYLWALKILYPKTLFLL 107 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhc---CCCCCceEEEECCccCCC-CChHHHH------------HHHHHHHhhcCCCEEEE
Confidence 5899999999999877655422 112468999999997532 2222221 11111123345568899
Q ss_pred cCCCCCh
Q 015364 82 GGNHEAS 88 (408)
Q Consensus 82 ~GNHE~~ 88 (408)
.||||..
T Consensus 108 RGNHE~~ 114 (305)
T cd07416 108 RGNHECR 114 (305)
T ss_pred eCCCcHH
Confidence 9999985
No 94
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.62 E-value=0.046 Score=64.01 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=61.2
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhcc---ccchhhhHhh
Q 015364 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMES---LNVPRKYREM 61 (408)
Q Consensus 1 mKIlV~GD~HG~ld----------------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~---l~~p~k~~~l 61 (408)
++|+-++|+||.+. .+...|+++.+++ +--++|-+||++......+... .....+...|
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~--~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~ 119 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKEN--PNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPM 119 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhC--CCeEEEeCCCccCCChhhhHHhhhccccCCCcCHH
Confidence 47999999999863 3333344443332 3345666999876432211100 0000000111
Q ss_pred hHHHHHhhCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEec------CceEEEE---------CCEEE
Q 015364 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG------FAGVVKF---------GNIRI 120 (408)
Q Consensus 62 ~dF~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg------~~gv~~i---------~GlrI 120 (408)
-++.. .+.+ -.++.||||.. ..|.+...+ -++|.||+.-. ..-+++. +|+||
T Consensus 120 i~~mN------~lgy-Da~~lGNHEFd~G~~~L~~~~~~a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~gvkI 192 (1163)
T PRK09419 120 IKAMN------ALGY-DAGTLGNHEFNYGLDFLDGTIKGANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQGVKV 192 (1163)
T ss_pred HHHHh------hcCc-cEEeecccccccCHHHHHHHHhcCCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCCCeEE
Confidence 11111 1222 25779999964 334443322 37899996432 2235566 89999
Q ss_pred Eeeccc
Q 015364 121 GGLSGI 126 (408)
Q Consensus 121 aGlsGi 126 (408)
|.+|-.
T Consensus 193 giiG~~ 198 (1163)
T PRK09419 193 GYIGFV 198 (1163)
T ss_pred EEEecC
Confidence 988754
No 95
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.62 E-value=0.047 Score=61.40 Aligned_cols=120 Identities=18% Similarity=0.106 Sum_probs=61.4
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHH
Q 015364 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSF 64 (408)
Q Consensus 1 mKIlV~GD~HG~ld----------------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF 64 (408)
++|+-..|+||++. ++...|+++.+++ +--++|-+||++......++....-|-+..+..-.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~--~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN--PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC--CCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 47999999999864 2233344433332 44699999998764332222100000000000001
Q ss_pred HHHhhCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEecC-------ceEEEE-----CC----EEEEe
Q 015364 65 WKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLGF-------AGVVKF-----GN----IRIGG 122 (408)
Q Consensus 65 ~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg~-------~gv~~i-----~G----lrIaG 122 (408)
.+.+ ..+.+ -....||||.- .+|.+...+ -+|+.||+.... .-|++. +| +|||.
T Consensus 194 i~am---N~LGy-DA~tLGNHEFDyG~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~~~vKIGi 269 (814)
T PRK11907 194 YAAL---EALGF-DAGTLGNHEFNYGLDYLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKKVTLNIGI 269 (814)
T ss_pred HHHH---hccCC-CEEEechhhcccCHHHHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcccceEEEE
Confidence 1111 11221 25788999964 334443322 388999986432 223333 56 89988
Q ss_pred eccc
Q 015364 123 LSGI 126 (408)
Q Consensus 123 lsGi 126 (408)
+|=.
T Consensus 270 IGlv 273 (814)
T PRK11907 270 TGIV 273 (814)
T ss_pred EEeC
Confidence 7643
No 96
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=96.62 E-value=0.0037 Score=62.23 Aligned_cols=60 Identities=20% Similarity=0.225 Sum_probs=40.7
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCCCC--ccceeeccCCCCCeeEEEeccccCCCCCeeEEEeccC
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~H~--~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~ 266 (408)
.-|..++.+.+++.+=++.+=||--+ .|+-. + +..-.|-|=|-.-|+....--.++.|+.
T Consensus 219 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~--~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~ 280 (293)
T cd07414 219 TFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFF--A-KRQLVTLFSAPNYCGEFDNAGAMMSVDE 280 (293)
T ss_pred ecCHHHHHHHHHHcCCeEEEECCccccCeEEEe--C-CCcEEEEecCCcccCCCCceEEEEEECC
Confidence 35899999999999999999999643 34432 2 2345788877777764333344555543
No 97
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=96.53 E-value=0.0051 Score=61.98 Aligned_cols=60 Identities=18% Similarity=0.161 Sum_probs=41.4
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCCCC--ccceeeccCCCCCeeEEEeccccCCCCCeeEEEeccC
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~H~--~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~ 266 (408)
.-|..++.+.+++.+=.+.+=||--+ .|+-. + +..-.|-|=|-.-|+....--.++.|..
T Consensus 228 ~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~--~-~~~~iTvFSa~~Y~~~~~N~ga~l~i~~ 289 (320)
T PTZ00480 228 VFSQEIVQVFLKKHELDLICRAHQVVEDGYEFF--S-KRQLVTLFSAPNYCGEFDNAGSMMTIDE 289 (320)
T ss_pred ccCHHHHHHHHHhCCCcEEEEcCccccCceEEe--C-CCcEEEEeCCcccCCCCCccEEEEEECC
Confidence 45999999999999999999999643 34322 2 3345788888777774333344455543
No 98
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=96.43 E-value=0.005 Score=61.09 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=40.0
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCCCC--ccceeeccCCCCCeeEEEeccccCCCCCeeEEEeccC
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~H~--~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~ 266 (408)
.-|..++.+.+++.+=++.+=||--+ .|+-. + +..-.|-|=|-.-|+....-..++.|+.
T Consensus 211 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~--~-~~~~~TvfSa~~y~~~~~n~~a~l~i~~ 272 (285)
T cd07415 211 LFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWM--F-DDKLVTVWSAPNYCYRCGNVASIMELDE 272 (285)
T ss_pred ccCHHHHHHHHHHCCCeEEEEcCccccceEEEe--c-CCcEEEEecCCcccCCCCceEEEEEECC
Confidence 45899999999999999999999643 34322 2 2345788887777753222244444543
No 99
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=96.40 E-value=0.0056 Score=61.27 Aligned_cols=61 Identities=11% Similarity=0.165 Sum_probs=40.2
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCCCCc--cceeeccCCCCCeeEEEeccccCCCCCeeEEEeccC
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHLHCK--FAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~H~~--f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~ 266 (408)
.-|..++.+.+++.+=++.+=||--+. |+-... ...-.|-|=|-.-|+...--..++.|+.
T Consensus 212 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~--~~~~iTvfSa~~Y~~~~~N~~ail~i~~ 274 (303)
T PTZ00239 212 LFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFP--DQNLVTVWSAPNYCYRCGNIASILCLDE 274 (303)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeC--CCeEEEEECCCcccCCCCceEEEEEECC
Confidence 468999999999999999999996443 432221 2224788877777754333344555543
No 100
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.39 E-value=0.089 Score=57.98 Aligned_cols=116 Identities=17% Similarity=0.113 Sum_probs=61.2
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhh---Hhh
Q 015364 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKY---REM 61 (408)
Q Consensus 1 mKIlV~GD~HG~ld----------------~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~---~~l 61 (408)
++|+-..|+||++. .+-..|+++.+++ +--+++-+||++......+..... +.+. .-+
T Consensus 26 L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~--~n~llvD~GD~~qGsp~~~~~~~~-~~~~g~~~p~ 102 (649)
T PRK09420 26 LRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEA--KNSVLVDNGDLIQGSPLGDYMAAK-GLKAGDVHPV 102 (649)
T ss_pred EEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhC--CCEEEEECCCcCCCchhhhhhhhc-cccCCCcchH
Confidence 58999999999863 2333344443332 346899999987644332211000 0000 001
Q ss_pred hHHHHHhhCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEec-------CceEEEE-----C----CEE
Q 015364 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG-------FAGVVKF-----G----NIR 119 (408)
Q Consensus 62 ~dF~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg-------~~gv~~i-----~----Glr 119 (408)
-++... +. --....||||.- .+|.++..+ .+++.||+... ..-|++. + |+|
T Consensus 103 i~amN~------lg-yDa~tlGNHEFd~G~~~L~~~~~~a~fP~l~ANv~~~~~~~~~~~py~I~e~~v~~~~G~~~~vk 175 (649)
T PRK09420 103 YKAMNT------LD-YDVGNLGNHEFNYGLDYLKKALAGAKFPYVNANVIDAKTGKPLFTPYLIKEKEVKDKDGKEHTIK 175 (649)
T ss_pred HHHHHh------cC-CcEEeccchhhhcCHHHHHHHHhcCCCCEEEEEEEecCCCCcccCCeEEEEEEeeccCCCccceE
Confidence 111111 11 236788999964 334444332 38899997532 1223333 3 589
Q ss_pred EEeeccc
Q 015364 120 IGGLSGI 126 (408)
Q Consensus 120 IaGlsGi 126 (408)
||.+|=.
T Consensus 176 IGiIGl~ 182 (649)
T PRK09420 176 IGYIGFV 182 (649)
T ss_pred EEEEEec
Confidence 9887643
No 101
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=96.38 E-value=0.0064 Score=61.21 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=39.4
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCCCC--ccceeeccCCCCCeeEEEeccccCCCCCeeEEEecc
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~H~--~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~ 265 (408)
.-|..++.+.+++.+=++.+-||--+ .|+.. + +..-.|-|=|=.-|+...-.-.++.|+
T Consensus 230 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~--~-~~~~~TvfSa~~Y~~~~~N~ga~~~i~ 290 (316)
T cd07417 230 QFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVE--H-DGKCITVFSAPNYCDQMGNKGAFIRIT 290 (316)
T ss_pred EeCHHHHHHHHHHcCCcEEEECCcccceeEEEe--c-CCeEEEEeCCccccCCCCcceEEEEEe
Confidence 35889999999999999999999643 34332 2 234578887777776322223444443
No 102
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.23 E-value=0.14 Score=56.30 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=60.4
Q ss_pred CEEEEEcCCCCChHH----------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhh---hHhh
Q 015364 1 MRIAVEGCMHGELDN----------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRK---YREM 61 (408)
Q Consensus 1 mKIlV~GD~HG~ld~----------------i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k---~~~l 61 (408)
++|+-+.|+||.+.. +-..|+++.+++ +--+++-+||++......+...-. +.+ ..-+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~--~n~lllD~GD~~qGsp~~~~~~~~-~~~~~~~~p~ 79 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEV--KNSVLVDNGDLIQGSPLGDYMAAQ-GLKAGQMHPV 79 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhC--CCeEEEECCCcCCCccchhhhhhc-cccCCCcChH
Confidence 579999999999753 223333333332 346899999987643322211000 000 0001
Q ss_pred hHHHHHhhCCCCCCccEEEEcCCCCCh---hhHHHHhhC---CccCCceEEec-------CceEEEE-----C----CEE
Q 015364 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG-------FAGVVKF-----G----NIR 119 (408)
Q Consensus 62 ~dF~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg-------~~gv~~i-----~----Glr 119 (408)
-++. ..+.+ -....||||.. .+|.+...+ .+++.||+... ..-|++. + |+|
T Consensus 80 ~~~m------N~lgy-Da~tlGNHEFd~G~~~L~~~~~~a~fP~l~aNv~~~~~~~~~~~py~I~~~~~~~~~G~~~~~k 152 (626)
T TIGR01390 80 YKAM------NLLKY-DVGNLGNHEFNYGLPFLKQAIAAAKFPIVNANVVDAGTGQPAFTPYLIQERSVVDTDGKPHTLK 152 (626)
T ss_pred HHHH------hhcCc-cEEecccccccccHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCeEEEEEEeeccCCCccceE
Confidence 1111 11222 25778999964 334443322 37889987532 1223333 2 699
Q ss_pred EEeeccc
Q 015364 120 IGGLSGI 126 (408)
Q Consensus 120 IaGlsGi 126 (408)
||.+|-.
T Consensus 153 IGiIG~~ 159 (626)
T TIGR01390 153 VGYIGFV 159 (626)
T ss_pred EEEEEec
Confidence 9988754
No 103
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=96.21 E-value=0.013 Score=58.81 Aligned_cols=59 Identities=17% Similarity=0.207 Sum_probs=40.8
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCC--CCccceeeccCCCCCeeEEEeccccCCCCCeeEEEecc
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~--H~~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~ 265 (408)
.-|..++.+.+++.+=++.+=||- ...|... + +..-.|-|=|-.-|+...---.++.|.
T Consensus 239 ~fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~--~-~~~~iTvfSa~~y~~~~~n~~ai~~i~ 299 (311)
T cd07419 239 KFGPDRVHRFLEENDLQMIIRAHECVMDGFERF--A-QGKLITLFSATNYCGTAGNAGAILVLG 299 (311)
T ss_pred eECHHHHHHHHHHCCCeEEEEechhhhCCeEEe--C-CCeEEEEecCCcccCCCCceEEEEEEC
Confidence 358899999999999999999996 3445433 2 223578888877776433335555554
No 104
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.20 E-value=0.017 Score=55.66 Aligned_cols=74 Identities=20% Similarity=0.301 Sum_probs=49.7
Q ss_pred EEEEEcCCCCChHHHH----------------HHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHH
Q 015364 2 RIAVEGCMHGELDNVY----------------KTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~----------------~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~ 65 (408)
+.+|++|+|=.++.-+ +++.++-++. .++.||++||+....... .+....+...|.
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~--~p~~lIilGD~KH~~~~~------~~~e~~~~~~f~ 92 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERY--GPKRLIILGDLKHEFGKS------LRQEKEEVREFL 92 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhc--CCCEEEEcCccccccCcc------ccccHHHHHHHH
Confidence 5799999997665444 3444444444 489999999997643221 122345567788
Q ss_pred HHhhCCCCCCccEEEEcCCCCCh
Q 015364 66 KYYSGQEVAPIPTIFIGGNHEAS 88 (408)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~ 88 (408)
+++++. -+++|.||||+.
T Consensus 93 ~~~~~~-----evi~i~GNHD~~ 110 (235)
T COG1407 93 ELLDER-----EVIIIRGNHDNG 110 (235)
T ss_pred HHhccC-----cEEEEeccCCCc
Confidence 886554 379999999874
No 105
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=96.18 E-value=0.0079 Score=59.94 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=40.4
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCCCC--ccceeeccCCCCCeeEEEeccccCCCCCeeEEEecc
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~H~--~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~ 265 (408)
.-|..++.+.+++.+=++.+=||--+ .|+-. + +..-.|-|=|-.-|+....--.++.|+
T Consensus 221 ~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~--~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~ 281 (294)
T PTZ00244 221 LFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFF--A-SRQLVTVFSAPNYCGEFDNDAAVMNID 281 (294)
T ss_pred ccCHHHHHHHHHHcCCcEEEEcCccccCceEEc--C-CCeEEEEeCCccccCCCCceEEEEEEC
Confidence 45899999999999999999999643 34422 2 334578888777776432233444454
No 106
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=96.17 E-value=0.026 Score=55.87 Aligned_cols=114 Identities=17% Similarity=0.159 Sum_probs=61.2
Q ss_pred CEEEEEcCCCCChHH----------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHH
Q 015364 1 MRIAVEGCMHGELDN----------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSF 64 (408)
Q Consensus 1 mKIlV~GD~HG~ld~----------------i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF 64 (408)
++|+-++|+||.++. +.+.+.+..++.+ +--++|-+||++......+.. ..+-+.|-++
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~-~~~Llld~GD~~qGs~~~~~~----~~~g~~~~~~ 80 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKG-VDLLLVDTGDLHDGNGLSDAS----PPPGSYSNPI 80 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcC-CCEEEEeCCCccCCeeceeee----cCCChHHHHH
Confidence 479999999998642 2222322222223 323777899987543222211 0112223333
Q ss_pred HHHhhCCCCCCccEEEEcCCCCChhh---HHH---Hh---hCCccCCceEEecC----------ceEEEEC-CEEEEeec
Q 015364 65 WKYYSGQEVAPIPTIFIGGNHEASNY---LWE---LY---YGGWAAPNIYFLGF----------AGVVKFG-NIRIGGLS 124 (408)
Q Consensus 65 ~~y~~g~~~~pvpt~fI~GNHE~~~~---l~e---l~---~gg~va~NI~yLg~----------~gv~~i~-GlrIaGls 124 (408)
... +++ =.++.||||.... +.. +. .-.|++.||++-.. .-+++++ |+|||-+|
T Consensus 81 mN~------mgy-Da~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiG 153 (282)
T cd07407 81 FRM------MPY-DLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFG 153 (282)
T ss_pred HHh------cCC-cEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEE
Confidence 332 222 3688999998421 222 21 13489999987531 2344565 99998775
Q ss_pred cc
Q 015364 125 GI 126 (408)
Q Consensus 125 Gi 126 (408)
=.
T Consensus 154 lt 155 (282)
T cd07407 154 FL 155 (282)
T ss_pred Ee
Confidence 44
No 107
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.16 E-value=0.026 Score=54.44 Aligned_cols=107 Identities=20% Similarity=0.209 Sum_probs=64.9
Q ss_pred EEEcCCCCC-----hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhh-HHHHHhhCCCCCCcc
Q 015364 4 AVEGCMHGE-----LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMK-SFWKYYSGQEVAPIP 77 (408)
Q Consensus 4 lV~GD~HG~-----ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~-dF~~y~~g~~~~pvp 77 (408)
+.++|+|=. +...+ +.-+.... ...|.|.++||++..+-..+ --|++.+++. .+.+. .....+
T Consensus 1 lFISDlHL~~~~p~~t~~f--l~Fl~~~a-~~ad~lyilGDifd~w~g~~----~~~~~~~~V~~~l~~~----a~~G~~ 69 (237)
T COG2908 1 LFISDLHLGPKRPALTAFF--LDFLREEA-AQADALYILGDIFDGWIGDD----EPPQLHRQVAQKLLRL----ARKGTR 69 (237)
T ss_pred CeeeccccCCCCcHHHHHH--HHHHHhcc-ccCcEEEEechhhhhhhcCC----cccHHHHHHHHHHHHH----HhcCCe
Confidence 367898865 22222 22232322 25799999999998765544 1245555553 22222 234568
Q ss_pred EEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecc
Q 015364 78 TIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSG 125 (408)
Q Consensus 78 t~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsG 125 (408)
+|||.||||.. +.+.. + .-+-++..+.+..+++..|-|+.=+-|
T Consensus 70 v~~i~GN~Dfl--l~~~f-~-~~~g~~~l~~~~~~~~l~g~~~Ll~HG 113 (237)
T COG2908 70 VYYIHGNHDFL--LGKRF-A-QEAGGMTLLPDPIVLDLYGKRILLAHG 113 (237)
T ss_pred EEEecCchHHH--HHHHH-H-hhcCceEEcCcceeeeecCcEEEEEeC
Confidence 99999999832 22221 1 112346667788888899999987777
No 108
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=96.07 E-value=0.011 Score=60.77 Aligned_cols=70 Identities=23% Similarity=0.421 Sum_probs=44.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCC--ccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEE
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYK--IDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTI 79 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~--~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~ 79 (408)
+|.|+||+||.+..+...+.. .|.+ -+.+|++||+.. |....++.+ .+...+ ....|--++
T Consensus 67 ~i~VvGDIHG~~~dL~~ll~~----~g~~~~~~~ylFLGDyVD-RGp~SlEvl----------~lL~~l--ki~~p~~v~ 129 (377)
T cd07418 67 EVVVVGDVHGQLHDVLFLLED----AGFPDQNRFYVFNGDYVD-RGAWGLETF----------LLLLSW--KVLLPDRVY 129 (377)
T ss_pred CEEEEEecCCCHHHHHHHHHH----hCCCCCCceEEEeccccC-CCCChHHHH----------HHHHHH--hhccCCeEE
Confidence 479999999999988765543 2322 246999999975 322222222 111111 223455689
Q ss_pred EEcCCCCCh
Q 015364 80 FIGGNHEAS 88 (408)
Q Consensus 80 fI~GNHE~~ 88 (408)
.+.||||..
T Consensus 130 lLRGNHE~~ 138 (377)
T cd07418 130 LLRGNHESK 138 (377)
T ss_pred EEeeecccc
Confidence 999999975
No 109
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=96.06 E-value=0.043 Score=51.12 Aligned_cols=122 Identities=16% Similarity=0.142 Sum_probs=62.4
Q ss_pred EEEEcCCCCC-hHHHHHHHHHHHHh-c-CCCccEEEEecCccccCCcchhccccchhhhHh----hhHHHHHhhCCCCCC
Q 015364 3 IAVEGCMHGE-LDNVYKTLQYMENI-N-SYKIDLLLCCGDFQAVRNENDMESLNVPRKYRE----MKSFWKYYSGQEVAP 75 (408)
Q Consensus 3 IlV~GD~HG~-ld~i~~~v~~l~~k-~-g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~----l~dF~~y~~g~~~~p 75 (408)
|+|+++.|-. -...++.+..+-+. . ..++++||++|+|.......... -.++..++. +..+.+.+.... ..
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~-~~ 78 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISS-GSVPDSYSFEEDFLKELDSFLESIL-PS 78 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHH-T---HHCCHHHHHHHHCHHHHCCCH-CC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCcccccccc-ccccccccccHHHHHHHHHHHhhcc-cc
Confidence 6788888866 23345555554432 2 34799999999998754332110 001111222 233344443333 34
Q ss_pred ccEEEEcCCCCChhh-HHHH-hh-C---CccCC--ceEEecCceEEEECCEEEEeeccc
Q 015364 76 IPTIFIGGNHEASNY-LWEL-YY-G---GWAAP--NIYFLGFAGVVKFGNIRIGGLSGI 126 (408)
Q Consensus 76 vpt~fI~GNHE~~~~-l~el-~~-g---g~va~--NI~yLg~~gv~~i~GlrIaGlsGi 126 (408)
+.+++|+|++|.... .... .. . ..... ++.++.+=..+.++|++|++.+|-
T Consensus 79 ~~vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~s~d 137 (209)
T PF04042_consen 79 TQVVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYSNIHFVSNPCRISINGQEIGVTSGD 137 (209)
T ss_dssp SEEEEE--TTCTT-S-SCSB----TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-SSH
T ss_pred cEEEEeCCCccccccCCCCCCCCCHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEECCc
Confidence 789999999998755 2111 00 0 11122 288888888889999999998763
No 110
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=95.89 E-value=0.023 Score=52.00 Aligned_cols=52 Identities=27% Similarity=0.399 Sum_probs=31.1
Q ss_pred CccEEEEecCccccCCcchhccccchhhhH-hhhHHHHHhhCCCC--CCccEEEEcCCCCC
Q 015364 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYR-EMKSFWKYYSGQEV--APIPTIFIGGNHEA 87 (408)
Q Consensus 30 ~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~-~l~dF~~y~~g~~~--~pvpt~fI~GNHE~ 87 (408)
++|+||++||++......+- ..+. ....|.+.+..... ..+++++|.||||.
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~ 99 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADS------EEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDI 99 (171)
T ss_pred CCCEEEEeccccCCcEeCCH------HHHHHHHHHHHHHhcccccccCCceEEEECCcccc
Confidence 69999999999864322110 1112 23444444332211 26899999999975
No 111
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=95.81 E-value=0.029 Score=50.45 Aligned_cols=50 Identities=18% Similarity=0.336 Sum_probs=29.4
Q ss_pred CccEEEEecCccccCCcchhccccchhhh-HhhhHHHHHhhCCCCCCccEEEEcCCCCC
Q 015364 30 KIDLLLCCGDFQAVRNENDMESLNVPRKY-REMKSFWKYYSGQEVAPIPTIFIGGNHEA 87 (408)
Q Consensus 30 ~~DlLI~~GDf~~~~~~~dl~~l~~p~k~-~~l~dF~~y~~g~~~~pvpt~fI~GNHE~ 87 (408)
++|+||++||++.......- ..+ ..+..|.+.+. ....+|+++|.||||.
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~i~~v~GNHD~ 88 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTD------EEWEDYVERFKKMFG--HPPDLPLHVVVGNHDI 88 (156)
T ss_pred CCCEEEECCCCCCCCccCCH------HHHHHHHHHHHHHhc--cCCCCeEEEEcCCCCc
Confidence 68999999999864321110 011 11233444332 1135789999999984
No 112
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.79 E-value=0.026 Score=51.23 Aligned_cols=69 Identities=20% Similarity=0.214 Sum_probs=47.4
Q ss_pred EEEEEcCCCCC------------hHHHHH-HHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHh
Q 015364 2 RIAVEGCMHGE------------LDNVYK-TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (408)
Q Consensus 2 KIlV~GD~HG~------------ld~i~~-~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~ 68 (408)
+|.++||+|=. ++..-+ .+..+++.-+ |=|.|-++|||.+.+|.. +..++.++.+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~-p~D~lwhLGDl~~~~n~~-----------~~a~~IlerL 72 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVG-PDDVLWHLGDLSSGANRE-----------RAAGLILERL 72 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCC-ccceEEEecccccccchh-----------hHHHHHHHHc
Confidence 47889999943 222111 1456666666 889999999999887753 2345566666
Q ss_pred hCCCCCCccEEEEcCCCCCh
Q 015364 69 SGQEVAPIPTIFIGGNHEAS 88 (408)
Q Consensus 69 ~g~~~~pvpt~fI~GNHE~~ 88 (408)
.|. ..+|+||||..
T Consensus 73 nGr------khlv~GNhDk~ 86 (186)
T COG4186 73 NGR------KHLVPGNHDKC 86 (186)
T ss_pred CCc------EEEeeCCCCCC
Confidence 664 37999999865
No 113
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=95.53 E-value=0.035 Score=58.88 Aligned_cols=81 Identities=23% Similarity=0.361 Sum_probs=50.4
Q ss_pred CEEEEEcCCCCCh--------HHH---HHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHH----
Q 015364 1 MRIAVEGCMHGEL--------DNV---YKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW---- 65 (408)
Q Consensus 1 mKIlV~GD~HG~l--------d~i---~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~---- 65 (408)
|||||..|+|-.. +.- |+-|-.+.+.+ .+|+++.-||+|....... .++ |+-++-|.
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~--~VDmiLlGGDLFHeNkPSr-~~L-----~~~i~lLRryCl 85 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQEN--DVDMILLGGDLFHENKPSR-KTL-----HRCLELLRRYCL 85 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhc--CCcEEEecCcccccCCccH-HHH-----HHHHHHHHHHcc
Confidence 7999999999532 111 22222232322 6999999999997532211 111 33333222
Q ss_pred -------------------------HHhhCCCCCCccEEEEcCCCCChh
Q 015364 66 -------------------------KYYSGQEVAPIPTIFIGGNHEASN 89 (408)
Q Consensus 66 -------------------------~y~~g~~~~pvpt~fI~GNHE~~~ 89 (408)
.|+.+...+.+|++-|-||||+++
T Consensus 86 gdkP~~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDpS 134 (646)
T KOG2310|consen 86 GDKPVQLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDPS 134 (646)
T ss_pred CCCceeeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCCc
Confidence 366666677899999999999873
No 114
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=95.47 E-value=0.24 Score=48.43 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=31.9
Q ss_pred EEEEEcCCCCCh--HHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 015364 2 RIAVEGCMHGEL--DNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (408)
Q Consensus 2 KIlV~GD~HG~l--d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~ 44 (408)
|||++||+=|.- ..+.+.|..+-+++ +.|++|.-||..+..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~--~~D~vi~NgEn~~gg 43 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEY--KIDFVIANGENAAGG 43 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHC--CCCEEEECCccccCC
Confidence 799999999974 56666677775554 589999999986543
No 115
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=95.32 E-value=0.1 Score=51.34 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=32.7
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCcccc
Q 015364 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAV 43 (408)
Q Consensus 1 mKIlV~GD~HG~--ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~ 43 (408)
||||++||+=|+ ...+-+.+..+.+++ +.|++|.-||..+.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~--~~D~vIaNgEn~~g 43 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKY--QADLVIANGENTTH 43 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhC--CCCEEEEcCcccCC
Confidence 999999999998 455566677776654 58999999998754
No 116
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=95.25 E-value=0.046 Score=54.26 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=44.1
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
.||+-++|+|-..-. .+.++.+.+....-.|+++++||+...+.. +.+..... .+.. .+++.++++
T Consensus 45 ~~iv~lSDlH~~~~~-~~~~~~~~~i~~~~~DlivltGD~~~~~~~---------~~~~~~~~---~L~~-L~~~~gv~a 110 (284)
T COG1408 45 LKIVQLSDLHSLPFR-EEKLALLIAIANELPDLIVLTGDYVDGDRP---------PGVAALAL---FLAK-LKAPLGVFA 110 (284)
T ss_pred eEEEEeehhhhchhh-HHHHHHHHHHHhcCCCEEEEEeeeecCCCC---------CCHHHHHH---HHHh-hhccCCEEE
Confidence 378999999976433 222222222222234999999999874111 11222222 3322 346789999
Q ss_pred EcCCCCChh
Q 015364 81 IGGNHEASN 89 (408)
Q Consensus 81 I~GNHE~~~ 89 (408)
|.||||-..
T Consensus 111 v~GNHd~~~ 119 (284)
T COG1408 111 VLGNHDYGV 119 (284)
T ss_pred Eeccccccc
Confidence 999997653
No 117
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.66 E-value=0.19 Score=45.31 Aligned_cols=108 Identities=25% Similarity=0.440 Sum_probs=60.8
Q ss_pred CEEEEEcCCCC-----ChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCC
Q 015364 1 MRIAVEGCMHG-----ELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAP 75 (408)
Q Consensus 1 mKIlV~GD~HG-----~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~p 75 (408)
|-+||+||.|= ++-.=|+++ - --| ++.-++|.|.+.+ .++++|++-. .
T Consensus 1 mLvL~lgD~HiP~Ra~~Lp~KFkkl---L-vPg-ki~hilctGNlcs-------------------~e~~dylk~l---~ 53 (183)
T KOG3325|consen 1 MLVLVLGDLHIPHRANDLPAKFKKL---L-VPG-KIQHILCTGNLCS-------------------KESYDYLKTL---S 53 (183)
T ss_pred CEEEEeccccCCccccccCHHHHhc---c-CCC-ceeEEEEeCCcch-------------------HHHHHHHHhh---C
Confidence 66788888884 222222222 1 123 6777888888644 2345664322 2
Q ss_pred ccEEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccch
Q 015364 76 IPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVRE 155 (408)
Q Consensus 76 vpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re 155 (408)
--+-.|.|--|.. ..| ...++++++.+|||.+.|.. -.||.+.+ |+
T Consensus 54 ~dvhiVrGeFD~~---------------~~y-P~~kvvtvGqfkIG~chGhq-----------ViP~gd~~--sL----- 99 (183)
T KOG3325|consen 54 SDVHIVRGEFDEN---------------LKY-PENKVVTVGQFKIGLCHGHQ-----------VIPWGDPE--SL----- 99 (183)
T ss_pred CCcEEEecccCcc---------------ccC-CccceEEeccEEEEeecCcE-----------eecCCCHH--HH-----
Confidence 2334456644332 221 24688999999999998852 46775422 21
Q ss_pred HHHHHHhccCCCccEEEe
Q 015364 156 YDVHKLMQIEEPIDIFLS 173 (408)
Q Consensus 156 ~dv~kL~~~~~~vDILLT 173 (408)
.+++-.-++|||||
T Consensus 100 ----~~LaRqldvDILl~ 113 (183)
T KOG3325|consen 100 ----ALLARQLDVDILLT 113 (183)
T ss_pred ----HHHHHhcCCcEEEe
Confidence 12222237999997
No 118
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=93.88 E-value=0.18 Score=47.44 Aligned_cols=52 Identities=25% Similarity=0.403 Sum_probs=32.1
Q ss_pred CccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCC-C--------------CCCccEEEEcCCCCC
Q 015364 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQ-E--------------VAPIPTIFIGGNHEA 87 (408)
Q Consensus 30 ~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~-~--------------~~pvpt~fI~GNHE~ 87 (408)
++|.++++||++..+...|.+ =+.+...|.+.+... . .-.++++.|+||||-
T Consensus 44 ~Pd~V~fLGDLfd~~w~~D~e------f~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 44 KPDAVVVLGDLFSSQWIDDEE------FAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred CCCEEEEeccccCCCcccHHH------HHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 689999999998643222211 124456666643211 1 114789999999974
No 119
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=92.60 E-value=0.24 Score=47.44 Aligned_cols=70 Identities=20% Similarity=0.333 Sum_probs=44.7
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCC-CccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEE
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSY-KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~-~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI 81 (408)
|-|+||+||.+-.+.+.. +.-|. |----|..|||..-. |-.+..|.-++--..+-|-.+-.+
T Consensus 48 VTvCGDIHGQFyDL~eLF----rtgG~vP~tnYiFmGDfVDRG-------------yySLEtfT~l~~LkaryP~~ITLl 110 (306)
T KOG0373|consen 48 VTVCGDIHGQFYDLLELF----RTGGQVPDTNYIFMGDFVDRG-------------YYSLETFTLLLLLKARYPAKITLL 110 (306)
T ss_pred eeEeeccchhHHHHHHHH----HhcCCCCCcceEEeccccccc-------------cccHHHHHHHHHHhhcCCceeEEe
Confidence 579999999986655432 22232 434578899997522 223555655543344556667789
Q ss_pred cCCCCChh
Q 015364 82 GGNHEASN 89 (408)
Q Consensus 82 ~GNHE~~~ 89 (408)
.||||+..
T Consensus 111 RGNHEsRq 118 (306)
T KOG0373|consen 111 RGNHESRQ 118 (306)
T ss_pred eccchhhh
Confidence 99999863
No 120
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=91.93 E-value=0.57 Score=48.73 Aligned_cols=52 Identities=27% Similarity=0.441 Sum_probs=31.9
Q ss_pred CccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEcCCCCCh
Q 015364 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEAS 88 (408)
Q Consensus 30 ~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~GNHE~~ 88 (408)
++|+++++||++......+-++. .++...|.+-+ | .+-.++++.|+||||--
T Consensus 93 kPdvvffLGDLfDeG~~~~~eEf-----~~~~~RfkkIf-~-~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 93 KPDVVFFLGDLFDEGQWAGDEEF-----KKRYERFKKIF-G-RKGNIKVIYIAGNHDIG 144 (410)
T ss_pred CCCEEEEeccccccCccCChHHH-----HHHHHHHHHhh-C-CCCCCeeEEeCCccccc
Confidence 78999999999984433221111 12223344433 1 22468999999999864
No 121
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=91.88 E-value=0.31 Score=51.47 Aligned_cols=62 Identities=23% Similarity=0.357 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCC--------------------
Q 015364 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQE-------------------- 72 (408)
Q Consensus 13 ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~-------------------- 72 (408)
++++.++|+.+++ +.+||++|.+||-..... |-++.=|...++|..
T Consensus 84 ~~AaVqtvNal~~--~~p~df~is~GD~~nn~~------------~nElrWyidvldG~~I~p~SG~~~~~e~v~~~~p~ 149 (492)
T TIGR03768 84 LDAAVQTVNDLHK--RDRFDFGISLGDACNSTQ------------YNELRWYIDVLDGKPITPSSGAHAGADTIDYQKPF 149 (492)
T ss_pred HHHHHHHHHHhhc--CCCceEEEeccccccchh------------HHHHHHHHHHhcCCeeccCCCCCCCccCCCCCCcc
Confidence 5677777777754 348999999999865321 334444444444421
Q ss_pred -----CCCccEEEEcCCCCCh
Q 015364 73 -----VAPIPTIFIGGNHEAS 88 (408)
Q Consensus 73 -----~~pvpt~fI~GNHE~~ 88 (408)
...+|.|.+.||||..
T Consensus 150 ~a~GL~~~iPWY~v~GNHD~~ 170 (492)
T TIGR03768 150 QAAGLDKSIPWYQVLGNHDHF 170 (492)
T ss_pred cccccCCCCceEEeecCCccc
Confidence 1238999999999875
No 122
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=91.43 E-value=7.6 Score=36.90 Aligned_cols=55 Identities=16% Similarity=0.240 Sum_probs=29.7
Q ss_pred CCCccEEEEcCCCCChh---hHHHHhhCCccCCceEEec---------CceEEEECCEEEEeecccCC
Q 015364 73 VAPIPTIFIGGNHEASN---YLWELYYGGWAAPNIYFLG---------FAGVVKFGNIRIGGLSGIYN 128 (408)
Q Consensus 73 ~~pvpt~fI~GNHE~~~---~l~el~~gg~va~NI~yLg---------~~gv~~i~GlrIaGlsGi~~ 128 (408)
.+.+-.+.+++||+..- .+.+.. ..+-..||.+.| ..-+++++|+|||.+|-...
T Consensus 75 ~~G~d~~tlaNNH~fD~G~~gl~~t~-~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~ 141 (239)
T cd07381 75 AAGFDVVSLANNHTLDYGEEGLLDTL-DALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYG 141 (239)
T ss_pred HhCCCEEEcccccccccchHHHHHHH-HHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECC
Confidence 35566777788998741 122111 000112343333 23455789999988876554
No 123
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=91.38 E-value=0.4 Score=46.62 Aligned_cols=70 Identities=21% Similarity=0.317 Sum_probs=43.5
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCC-CccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEE
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSY-KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~-~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI 81 (408)
|-|+||+||.+..+.+..+ .-|. +-.--|.+|||-.- ..- .+..|.-.+--...-|--+-.|
T Consensus 45 vtvcGDIHGQf~Dllelf~----igG~~~~t~YLFLGDyVDR-G~~------------SvEt~lLLl~lK~rYP~ritLi 107 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFR----IGGDVPETNYLFLGDYVDR-GYY------------SVETFLLLLALKVRYPDRITLI 107 (303)
T ss_pred cEEeecccchHHHHHHHHH----hCCCCCCCceEeecchhcc-ccc------------hHHHHHHHHHHhhcCcceeEEe
Confidence 5799999999987765432 2232 33457889999742 111 2344444332234445567789
Q ss_pred cCCCCChh
Q 015364 82 GGNHEASN 89 (408)
Q Consensus 82 ~GNHE~~~ 89 (408)
.||||...
T Consensus 108 RGNHEsRq 115 (303)
T KOG0372|consen 108 RGNHESRQ 115 (303)
T ss_pred eccchhhh
Confidence 99999873
No 124
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=90.59 E-value=0.56 Score=47.66 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=46.8
Q ss_pred CCChHHHHHHHHHhCCCEEEEcCC--CCccceeeccCCCCCeeEEEeccccCCCCCeeEEEeccCC
Q 015364 204 TLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESG 267 (408)
Q Consensus 204 ~lGS~~l~~Ll~~lkPry~FsGH~--H~~f~~~~~~~~~~~~TRFlaL~k~~~~~k~l~a~~i~~~ 267 (408)
.-|..+++++++++.=...+-||. +..|+.+.. ..-+|-|-|-.-|+.......++.++..
T Consensus 230 ~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~---r~lvTIFSAP~Ycg~~~n~gavm~Vd~~ 292 (331)
T KOG0374|consen 230 TFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAG---RKLVTIFSAPNYCGEFDNAGAVMRVDKN 292 (331)
T ss_pred EecHHHHHHHHHHhCcceEEEcCccccccceEecC---ceEEEEecCchhccccCCceEEEEECCC
Confidence 468899999999999999999994 556655532 2248999999999877777777777543
No 125
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=89.81 E-value=19 Score=34.35 Aligned_cols=113 Identities=15% Similarity=0.200 Sum_probs=55.4
Q ss_pred EEEEEcCC--C-----CChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcch-----hccccchhhhHhhhHHHHHhh
Q 015364 2 RIAVEGCM--H-----GELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNEND-----MESLNVPRKYREMKSFWKYYS 69 (408)
Q Consensus 2 KIlV~GD~--H-----G~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~d-----l~~l~~p~k~~~l~dF~~y~~ 69 (408)
+|+++||+ | -+++.+|+.+..+-+ ..|++++==.......... .-.+..|+ ++-++.
T Consensus 1 ~i~~~GDi~~~~~~~~~~~~~~~~~v~~~~~----~aD~~~~NlE~~~~~~~~~~~~~~~~~f~~~~---~~~~~l---- 69 (239)
T smart00854 1 TLSFVGDVMLGRGVYKADFSPPFAGVKPLLR----AADLAIGNLETPITGSGSPASGKKYPNFRAPP---ENAAAL---- 69 (239)
T ss_pred CEEEEeeecccCcccccCcchHHHHHHHHHh----cCCEeEEEeeccccCCCCCCCCCCceEecCCH---HHHHHH----
Confidence 57888986 2 235777877765433 4688776321110000000 01122221 222222
Q ss_pred CCCCCCccEEEEcCCCCChhh---HHHHhhCCccCCceEEecC---------ceEEEECCEEEEeecccCC
Q 015364 70 GQEVAPIPTIFIGGNHEASNY---LWELYYGGWAAPNIYFLGF---------AGVVKFGNIRIGGLSGIYN 128 (408)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~~---l~el~~gg~va~NI~yLg~---------~gv~~i~GlrIaGlsGi~~ 128 (408)
+.+.+-...+++||+..-- +.+... .+-..||.++|. .-+++++|+|||.+|-...
T Consensus 70 --~~~G~d~~~laNNH~fD~G~~gl~~t~~-~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~ 137 (239)
T smart00854 70 --KAAGFDVVSLANNHSLDYGEEGLLDTLA-ALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYG 137 (239)
T ss_pred --HHhCCCEEEeccCcccccchHHHHHHHH-HHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcC
Confidence 3355666777889987521 221110 001224444432 2355789999998886653
No 126
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=89.74 E-value=0.82 Score=44.85 Aligned_cols=69 Identities=20% Similarity=0.297 Sum_probs=41.2
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCC-CccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCC-CCCccEEE
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSY-KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQE-VAPIPTIF 80 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~-~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~-~~pvpt~f 80 (408)
+.|+||+||+++.+.+.. +--|. +---.|..||+-.-...++ +. ..|+-..+ +-|--+-+
T Consensus 62 vtvcGDvHGqf~dl~ELf----kiGG~~pdtnylfmGDyvdrGy~Sv-et-------------VS~lva~Kvry~~rvti 123 (319)
T KOG0371|consen 62 VTVCGDVHGQFHDLIELF----KIGGLAPDTNYLFMGDYVDRGYYSV-ET-------------VSLLVALKVRYPDRVTI 123 (319)
T ss_pred eEEecCcchhHHHHHHHH----HccCCCCCcceeeeeeecccccchH-HH-------------HHHHHHhhccccceeEE
Confidence 679999999999887654 22232 2334788999975332221 11 12222222 23444678
Q ss_pred EcCCCCChh
Q 015364 81 IGGNHEASN 89 (408)
Q Consensus 81 I~GNHE~~~ 89 (408)
+.||||...
T Consensus 124 lrGNHEsrq 132 (319)
T KOG0371|consen 124 LRGNHESRQ 132 (319)
T ss_pred ecCchHHHH
Confidence 999999763
No 127
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=86.15 E-value=1.4 Score=42.82 Aligned_cols=42 Identities=29% Similarity=0.355 Sum_probs=34.6
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 015364 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (408)
Q Consensus 1 mKIlV~GD~HG~--ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~ 44 (408)
||||++||+-|. .+.+...+..+.++. +.|++|+=|...+..
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky--k~dfvI~N~ENaa~G 44 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY--KIDFVIVNGENAAGG 44 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh--cCcEEEEcCccccCC
Confidence 899999999997 467888888776654 599999999887654
No 128
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=84.42 E-value=1.7 Score=44.30 Aligned_cols=52 Identities=27% Similarity=0.219 Sum_probs=33.5
Q ss_pred CccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEEcCCCCChhhHH
Q 015364 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLW 92 (408)
Q Consensus 30 ~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI~GNHE~~~~l~ 92 (408)
+.|+|+..||.-...+..|..+. -|+.|.. ...-.+|.-.+.||||..+.+.
T Consensus 100 ~PDlVVfTGD~i~g~~t~Da~~s-------l~kAvaP----~I~~~IPwA~~lGNHDdes~lt 151 (379)
T KOG1432|consen 100 KPDLVVFTGDNIFGHSTQDAATS-------LMKAVAP----AIDRKIPWAAVLGNHDDESDLT 151 (379)
T ss_pred CCCEEEEeCCcccccccHhHHHH-------HHHHhhh----HhhcCCCeEEEecccccccccC
Confidence 68999999997655555553211 0222322 2334578999999999875543
No 129
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=80.71 E-value=2.7 Score=43.02 Aligned_cols=69 Identities=25% Similarity=0.396 Sum_probs=36.7
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCc-cEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEEE
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSYKI-DLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~~~-DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~fI 81 (408)
|-|+||+||.+=.+.+ +-+--|.|. .--+.+||... |..-..+|+ .+-| +-...-|-..+.+
T Consensus 90 iTVCGDIHGQf~DLmK----LFEVGG~PA~t~YLFLGDYVD-RGyFSiECv-----------lYLw-sLKi~yp~tl~lL 152 (517)
T KOG0375|consen 90 ITVCGDIHGQFFDLMK----LFEVGGSPANTRYLFLGDYVD-RGYFSIECV-----------LYLW-SLKINYPKTLFLL 152 (517)
T ss_pred eeEecccchHHHHHHH----HHHccCCcccceeEeeccccc-cceeeeehH-----------HHHH-HHhcCCCCeEEEe
Confidence 7899999998644432 222233332 34677899864 222223332 1212 1122334334567
Q ss_pred cCCCCCh
Q 015364 82 GGNHEAS 88 (408)
Q Consensus 82 ~GNHE~~ 88 (408)
.||||..
T Consensus 153 RGNHECr 159 (517)
T KOG0375|consen 153 RGNHECR 159 (517)
T ss_pred cCCcchh
Confidence 7999986
No 130
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=78.00 E-value=15 Score=38.79 Aligned_cols=42 Identities=12% Similarity=0.142 Sum_probs=34.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcC-CCccEEEEecCcccc
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINS-YKIDLLLCCGDFQAV 43 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g-~~~DlLI~~GDf~~~ 43 (408)
++.+++|+|-+..++.+++.++-++.. .+.-++|.||.|.+.
T Consensus 284 ~fVfLSdV~LD~~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~ 326 (525)
T KOG3818|consen 284 SFVFLSDVFLDDKKVMEALRKIFQGYKDAPPTAIILCGSFTSS 326 (525)
T ss_pred eEEEEehhccccHHHHHHHHHHHhhccCCCCeEEEEecccccc
Confidence 467789999999899988888876643 478999999999874
No 131
>KOG2047 consensus mRNA splicing factor [RNA processing and modification]
Probab=76.75 E-value=1.3 Score=48.41 Aligned_cols=24 Identities=25% Similarity=0.603 Sum_probs=16.9
Q ss_pred CCCCCCCCCCCCCCCCcccccccc
Q 015364 384 DHKGPDLDPEEIPIDDEDELEELD 407 (408)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~ 407 (408)
+...+.+|||||+||+|++|||+|
T Consensus 790 ~~~~s~vnpdEidl~~ded~~e~d 813 (835)
T KOG2047|consen 790 TQEYSQVNPDEIDLDEDEDEDEDD 813 (835)
T ss_pred ccccCcCCccccccCCCccccccc
Confidence 334557999999999965555544
No 132
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=72.65 E-value=1.3 Score=46.47 Aligned_cols=69 Identities=30% Similarity=0.434 Sum_probs=42.2
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCC--ccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSYK--IDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~~--~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f 80 (408)
|-||||.||.+|.++-. --|+|-| -.--+.-|||.. |....++-+ |-=|.-| ..-|.-++.
T Consensus 167 VTiCGDLHGklDDL~~I----~yKNGlPS~~npYvFNGDFVD-RGk~siEvL--------miL~a~~----lv~P~~~~L 229 (631)
T KOG0377|consen 167 VTICGDLHGKLDDLLVI----LYKNGLPSSSNPYVFNGDFVD-RGKRSIEVL--------MILFALY----LVYPNAVHL 229 (631)
T ss_pred eEEeccccccccceEEE----EecCCCCCCCCCeeecCchhh-ccccchhhH--------HHHHHHH----hcCchhhhc
Confidence 77999999999987522 2356643 244678899975 322222222 2223333 234556777
Q ss_pred EcCCCCCh
Q 015364 81 IGGNHEAS 88 (408)
Q Consensus 81 I~GNHE~~ 88 (408)
=.||||++
T Consensus 230 NRGNHED~ 237 (631)
T KOG0377|consen 230 NRGNHEDH 237 (631)
T ss_pred cCCchHHH
Confidence 88999986
No 133
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=64.70 E-value=37 Score=33.39 Aligned_cols=106 Identities=16% Similarity=0.119 Sum_probs=57.4
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhcccc---------chhhhHhhhHHHHHhhCCC
Q 015364 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLN---------VPRKYREMKSFWKYYSGQE 72 (408)
Q Consensus 2 KIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~---------~p~k~~~l~dF~~y~~g~~ 72 (408)
++.++|| +.+.|.+.++.+-+ ..|+||+.|=++...++-..+++| .|..++.+.+|+... .
T Consensus 39 ~~~~VgD---~~~~I~~~l~~a~~----r~D~vI~tGGLGPT~DDiT~e~vAka~g~~lv~~~~al~~i~~~~~~r---~ 108 (255)
T COG1058 39 RITTVGD---NPDRIVEALREASE----RADVVITTGGLGPTHDDLTAEAVAKALGRPLVLDEEALAMIEEKYAKR---G 108 (255)
T ss_pred EEEecCC---CHHHHHHHHHHHHh----CCCEEEECCCcCCCccHhHHHHHHHHhCCCcccCHHHHHHHHHHHHhc---C
Confidence 5788999 55666655554432 489999999998754332222222 233334444443331 1
Q ss_pred CCCccEEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeeccc
Q 015364 73 VAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (408)
Q Consensus 73 ~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (408)
. +. .++-.....++.|..+-+|=+=.--+-++..+|..+..+.|.
T Consensus 109 ~-~~--------~~~~~K~A~~P~Ga~~l~NpvG~APG~~v~~~~~~v~~lPGv 153 (255)
T COG1058 109 R-EM--------TEANRKQAMLPEGAEVLDNPVGTAPGFVVEGNGKNVYVLPGV 153 (255)
T ss_pred C-CC--------ChhhhhhccCCCCCEeCCCCCCCCCeeEEecCCeEEEEeCCC
Confidence 0 00 112222333456666666654333334456678888888775
No 134
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=58.18 E-value=7.1 Score=40.15 Aligned_cols=61 Identities=11% Similarity=0.037 Sum_probs=39.9
Q ss_pred eeeeCHHHHHHHHHhCCCCCCCCCCCCCC-----CCCCCchhHHHHHHHHhhhCC-CCCCCceEecCC
Q 015364 272 EIQYDEEWLAITRTFNSVFPLTSQSANFG-----GVQHDMNDCRQWVRSRLQERG-AKPFEFVRTVPC 333 (408)
Q Consensus 272 ~l~~d~ewl~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~f~~~~p~ 333 (408)
..+++..||..+|+.+-+..+.+. .++| .....+.+..+||+++..++. .++.||..|||.
T Consensus 357 ~~~~f~a~l~rl~~~~~~~~~~~d-~dlps~~~~e~~t~~~~~e~~~de~~~~~~~~~~~~~~nt~p~ 423 (456)
T KOG2863|consen 357 QTSVFSAELSRLRAMHVLREIERD-IDLPSYDSPEPYTLKIQKEEMVDEKADEDFMTIARNFCNTAPH 423 (456)
T ss_pred chhhHHHHHhhhhhhhhhhhhhcC-CCccccCCccccccccHHHHHhhhhhcccccccchhhccCCCC
Confidence 467788999988887665544432 1222 222345667788888874443 358999999974
No 135
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=57.89 E-value=29 Score=27.25 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=28.3
Q ss_pred CEEEEEcCCCC-ChHHHHHHHHHHHHhcCCCccEEEEecCc
Q 015364 1 MRIAVEGCMHG-ELDNVYKTLQYMENINSYKIDLLLCCGDF 40 (408)
Q Consensus 1 mKIlV~GD~HG-~ld~i~~~v~~l~~k~g~~~DlLI~~GDf 40 (408)
|||+|+|.-.= +.+.|+.++.++.++. .+++|+.|.-
T Consensus 4 ~rVli~GgR~~~D~~~i~~~Ld~~~~~~---~~~~lvhGga 41 (71)
T PF10686_consen 4 MRVLITGGRDWTDHELIWAALDKVHARH---PDMVLVHGGA 41 (71)
T ss_pred CEEEEEECCccccHHHHHHHHHHHHHhC---CCEEEEECCC
Confidence 89999997553 5678998888887765 4777777755
No 136
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=56.90 E-value=15 Score=34.30 Aligned_cols=40 Identities=30% Similarity=0.371 Sum_probs=24.1
Q ss_pred EEEEEcCCCCChHH--HHHHHHHHHHhcCCCccEEEEecCcccc
Q 015364 2 RIAVEGCMHGELDN--VYKTLQYMENINSYKIDLLLCCGDFQAV 43 (408)
Q Consensus 2 KIlV~GD~HG~ld~--i~~~v~~l~~k~g~~~DlLI~~GDf~~~ 43 (408)
||++.+|.+-+... .+..+... ....++|++|.+||.-..
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~--~~~~~~d~~l~~GD~IY~ 42 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYD--HSEEDPDLFLHLGDQIYA 42 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhh--ccccCCCEEEEcCCeecc
Confidence 57888888765432 22222110 012379999999998643
No 137
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=55.49 E-value=40 Score=33.78 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=30.3
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhc-C-----CCccEEEEecCcccc
Q 015364 1 MRIAVEGCMHGELDNVYKTLQYMENIN-S-----YKIDLLLCCGDFQAV 43 (408)
Q Consensus 1 mKIlV~GD~HG~ld~i~~~v~~l~~k~-g-----~~~DlLI~~GDf~~~ 43 (408)
.||.|+||+|-+--...++++++-+.. + ...-++|.+|+|.+.
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~ 76 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISL 76 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCC
Confidence 378899999988666666666554432 1 126789999999864
No 138
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=55.02 E-value=34 Score=37.34 Aligned_cols=66 Identities=23% Similarity=0.313 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhc--cccchhhhHhh-hHHHHHhhCCCCCCccEEEEcCCCCCh
Q 015364 14 DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDME--SLNVPRKYREM-KSFWKYYSGQEVAPIPTIFIGGNHEAS 88 (408)
Q Consensus 14 d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~--~l~~p~k~~~l-~dF~~y~~g~~~~pvpt~fI~GNHE~~ 88 (408)
..+-..+..+.+ +...+|.++..||......-.... .++ -+..+ .-+.+|. -.+|+|...||||..
T Consensus 195 ~lies~L~~ike-~~~~iD~I~wTGD~~~H~~w~~t~~~~l~---~~~~l~~~~~e~F-----pdvpvypalGNhe~~ 263 (577)
T KOG3770|consen 195 RLIESALDHIKE-NHKDIDYIIWTGDNVAHDVWAQTEEENLS---MLSRLTSLLSEYF-----PDVPVYPALGNHEIH 263 (577)
T ss_pred HHHHHHHHHHHh-cCCCCCEEEEeCCCCcccchhhhHHHHHH---HHHHHHHHHHHhC-----CCCceeeecccCCCC
Confidence 344444555533 343599999999998753111111 111 01111 1123332 268999999999975
No 139
>KOG1625 consensus DNA polymerase alpha-primase complex, polymerase-associated subunit B [Replication, recombination and repair]
Probab=49.66 E-value=1.4e+02 Score=32.66 Aligned_cols=107 Identities=12% Similarity=0.173 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhh--hHHHHHhhCCCCCCccEEEEcCCCCChhh
Q 015364 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREM--KSFWKYYSGQEVAPIPTIFIGGNHEASNY 90 (408)
Q Consensus 13 ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l--~dF~~y~~g~~~~pvpt~fI~GNHE~~~~ 90 (408)
++.+.+.|..+++ .++|+||.+|=|-..++. -+...+++-.+.++ ..+..++++.....+-+++|+---|+..
T Consensus 358 yepL~dll~~v~~---~~pdvLIL~GPFlD~~h~-~i~~~~~t~t~delF~~~i~~ile~~~~~~~~vVlvPs~~Da~~- 432 (600)
T KOG1625|consen 358 YEPLCDLLDYVNA---ERPDVLILFGPFLDSKHP-LINKGALTITFDELFEKLILGILETLVGSKTQVVLVPSTNDALC- 432 (600)
T ss_pred hhHHHHHHHHHhc---CCCCEEEEeccccCccCh-hhccCCcCccHHHHHHHHHHHHHHhccCCcceEEEecccccccc-
Confidence 4566666666654 279999999999765432 22222333333332 2334444444433345888887655532
Q ss_pred HHHHh-----hCCccC--CceEEecCceEEEECCEEEEeec
Q 015364 91 LWELY-----YGGWAA--PNIYFLGFAGVVKFGNIRIGGLS 124 (408)
Q Consensus 91 l~el~-----~gg~va--~NI~yLg~~gv~~i~GlrIaGls 124 (408)
+.-.+ ..+-.. .|++++++-..+.|+|+.+|-.|
T Consensus 433 ~~vfPq~pf~~~~~~~~~~~l~~~~nPc~f~in~v~vg~ts 473 (600)
T KOG1625|consen 433 LPVFPQPPFARNRLSDEKKNLKCVANPCLFSINGVEVGVTS 473 (600)
T ss_pred CccCCCCchhhhhccCcccceEEccCcceEEEccEEEEeec
Confidence 11000 111113 49999999999999999988654
No 140
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=45.65 E-value=18 Score=32.34 Aligned_cols=21 Identities=38% Similarity=0.472 Sum_probs=16.7
Q ss_pred HHHHhCCCEEEEcCCCCccce
Q 015364 213 LLEKLKPSYWFSAHLHCKFAA 233 (408)
Q Consensus 213 Ll~~lkPry~FsGH~H~~f~~ 233 (408)
++..++|++++|||+|.....
T Consensus 117 ~~~~~~~~~~l~GH~H~~~~~ 137 (156)
T cd08165 117 LLQWLKPRLVLSGHTHSFCEV 137 (156)
T ss_pred HHHhhCCCEEEEcccCCCcee
Confidence 556679999999999985443
No 141
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=45.26 E-value=47 Score=32.60 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=27.1
Q ss_pred EEEcCCCCCh--HHHHHHHHHHHHhcCCCccEEEEecCccccCC
Q 015364 4 AVEGCMHGEL--DNVYKTLQYMENINSYKIDLLLCCGDFQAVRN 45 (408)
Q Consensus 4 lV~GD~HG~l--d~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~ 45 (408)
|++||+=|+- +.+.+.+..+.++. .+|++|+-|.--+...
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~--~~DfVIaNgENaa~G~ 42 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEY--GIDFVIANGENAAGGF 42 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG----G-SEEEEE-TTTTTTS
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhc--CCCEEEECCcccCCCC
Confidence 6899999974 66777788776665 5999999999776543
No 142
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=42.16 E-value=20 Score=37.55 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=17.8
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 015364 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (408)
Q Consensus 1 mKIlV~GD~HG~--ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~ 44 (408)
+||++.||.+.+ .-.+|..+ .++ .++|++|++||.-...
T Consensus 106 ~r~a~~SC~~~~~~~~~~~~~~---a~~--~~~D~~l~lGD~IY~d 146 (453)
T PF09423_consen 106 FRFAFGSCQNYEDGYFPAYRRI---AER--DDPDFVLHLGDQIYED 146 (453)
T ss_dssp EEEEEE----CCC---HHHHHH---TT---S--SEEEE-S-SS---
T ss_pred eEEEEECCCCcccChHHHHHhh---hcc--CCCcEEEEeCCeeecc
Confidence 589999999874 34455444 232 2699999999987543
No 143
>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The
Probab=36.18 E-value=2e+02 Score=23.36 Aligned_cols=42 Identities=24% Similarity=0.594 Sum_probs=30.5
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEe----cCccccCCcc
Q 015364 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCC----GDFQAVRNEN 47 (408)
Q Consensus 4 lV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~----GDf~~~~~~~ 47 (408)
.+--...++++.+|..++++++-. .++++||- ||+....|..
T Consensus 15 sl~r~~~~~f~ef~~ll~~lH~l~--~~~f~i~Y~D~~gDLLPInNDd 60 (80)
T cd06403 15 SLDRNKPGKFEDFYKLLEHLHHIP--NVDFLIGYTDPHGDLLPINNDD 60 (80)
T ss_pred EeccccCcCHHHHHHHHHHHhCCC--CCcEEEEEeCCCCCEecccCcH
Confidence 333445689999999999987754 47888886 6777666653
No 144
>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A.
Probab=35.24 E-value=50 Score=29.12 Aligned_cols=120 Identities=24% Similarity=0.302 Sum_probs=55.7
Q ss_pred ccEEEEcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCc-ccCCCCCCCCCC--Chhhhhhhhc
Q 015364 76 IPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNAR-HYRLGHYERPPY--NESTIRSVYH 152 (408)
Q Consensus 76 vpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~-~y~~~~~e~~Py--~~~~irs~yh 152 (408)
+-.++|-=.|.+.-....+ ..+..++.++...+.++++|++|-++....... ....+ +..-| +. +=.++||
T Consensus 37 ~D~IlisH~H~DH~~~~~l---~~~~~~~~vv~~~~~~~~~~~~i~~v~~~~~~~~~~~~~--~~~~~~i~~-~g~~i~~ 110 (163)
T PF13483_consen 37 ADAILISHSHPDHFDPETL---KRLDRDIHVVAPGGEYRFGGFKITAVPAYHDGPGGHPRG--ENVGYLIEV-GGVTIYH 110 (163)
T ss_dssp -SEEEESSSSTTT-CCCCC---CCHHTSSEEE-TTEEEECTTEEEEEEEEEE-STGTS-TT--CCEEEEEEE-TTEEEEE
T ss_pred CCEEEECCCccccCChhHh---hhcccccEEEccceEEEEeeeEEEEEeeeccccCCCCcC--CeEEEEEEe-CCCEEEE
Confidence 3456676666543111000 011347777877888888898887766543111 01100 00001 11 1123444
Q ss_pred cchH----HHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcC
Q 015364 153 VREY----DVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAH 226 (408)
Q Consensus 153 ~re~----dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH 226 (408)
.-.. +...+.++ .++||++.---- ....|-+.+.+++++++||+.+--|
T Consensus 111 ~Gd~~~~~~~~~~~~~-~~vDvl~~p~~g------------------------~~~~~~~~a~~~~~~l~pk~viP~H 163 (163)
T PF13483_consen 111 AGDTGFPPDDEQLKQL-GKVDVLFLPVGG------------------------PFTMGPEEAAELAERLKPKLVIPMH 163 (163)
T ss_dssp -TT--S---HHHHHHH--S-SEEEEE--T------------------------TTS--HHHHHHHHHHCT-SEEEEES
T ss_pred ECCCccCCCHHHHhcc-cCCCEEEecCCC------------------------CcccCHHHHHHHHHHcCCCEEEeCC
Confidence 2111 12223333 578998874322 0235667789999999999988655
No 145
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=27.36 E-value=49 Score=24.45 Aligned_cols=27 Identities=26% Similarity=0.497 Sum_probs=19.4
Q ss_pred hhHHHHHhhCCCCCCccEEEEcCCCCChhh
Q 015364 61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNY 90 (408)
Q Consensus 61 l~dF~~y~~g~~~~pvpt~fI~GNHE~~~~ 90 (408)
|.|...++ ...++--+||+|.|++..|
T Consensus 12 M~DLrS~I---~~~~I~ql~ipGsHns~ty 38 (51)
T PF03490_consen 12 MSDLRSSI---GEMAITQLFIPGSHNSGTY 38 (51)
T ss_pred HHHHHHHH---hcceeeeEEeccccccccc
Confidence 55556664 4456778999999988755
No 146
>COG5214 POL12 DNA polymerase alpha-primase complex, polymerase-associated subunit B [DNA replication, recombination, and repair]
Probab=25.67 E-value=2.7e+02 Score=29.57 Aligned_cols=102 Identities=16% Similarity=0.237 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccC----CcchhccccchhhhHhhhH-HHHHhhCC-CCCCcc-EEEEcCCC
Q 015364 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR----NENDMESLNVPRKYREMKS-FWKYYSGQ-EVAPIP-TIFIGGNH 85 (408)
Q Consensus 13 ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~----~~~dl~~l~~p~k~~~l~d-F~~y~~g~-~~~pvp-t~fI~GNH 85 (408)
+..++..|..+++ .++|+||.||-|-... ....+.. .|++ .|++ |.+.+++. +....| ++.|+...
T Consensus 322 ~~pl~~~id~vn~---n~vdvlIl~GPFidi~h~li~~G~~~~--t~~~--~l~ElF~~r~tpiL~~~~~p~~vLIPstn 394 (581)
T COG5214 322 GSPLFDAIDRVNA---NDVDVLILIGPFIDINHILIQYGATQS--TPDS--MLKELFIPRITPILDRNAGPKAVLIPSTN 394 (581)
T ss_pred cChHHHHHHHhcc---CCccEEEEeccccCcchhhhhhCCCCC--CChh--HHHHHHHHhhhHHHhccCCCceEEecccc
Confidence 4456776766654 3799999999997541 1111110 1111 1222 44444442 233345 88898877
Q ss_pred CChhhHHHHhhCC------ccCCceEEecCceEEEECCEEEE
Q 015364 86 EASNYLWELYYGG------WAAPNIYFLGFAGVVKFGNIRIG 121 (408)
Q Consensus 86 E~~~~l~el~~gg------~va~NI~yLg~~gv~~i~GlrIa 121 (408)
|+..-....+.|. .+-.|..+++.-.-+.|+.+-+|
T Consensus 395 Da~s~h~a~PQ~~~~r~al~lp~nfkC~~NPc~F~INei~fg 436 (581)
T COG5214 395 DATSCHNAFPQGPIGRNALRLPSNFKCTGNPCEFFINEILFG 436 (581)
T ss_pred chhhccccCCccccchhhhcCCccccccCCcceeEeeeeEEE
Confidence 6653222222221 24457778887777777777665
No 147
>PRK03673 hypothetical protein; Provisional
Probab=23.07 E-value=5e+02 Score=27.14 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=22.5
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 015364 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (408)
Q Consensus 3 IlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~ 44 (408)
+.+++| +.+.|.+.++.. . ...|++|++|-.+...
T Consensus 40 ~~~v~D---~~~~i~~~l~~a---~-~~~DlVI~tGGlGpt~ 74 (396)
T PRK03673 40 RNTVGD---NLDALVAILRER---S-QHADVLIVNGGLGPTS 74 (396)
T ss_pred EEEcCC---CHHHHHHHHHHH---h-ccCCEEEEcCCCCCCC
Confidence 455666 555555555432 1 2689999999988654
No 148
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=22.95 E-value=7.7e+02 Score=27.34 Aligned_cols=58 Identities=22% Similarity=0.293 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCC--EEEEcCCCCc-cceee------ccCCCCCeeEEEeccccC-----CCCCeeEEEeccC
Q 015364 209 PAAQLLEKLKPS--YWFSAHLHCK-FAAVV------QHGEDSPVTKFLALDKCL-----PRRKFLQVFEIES 266 (408)
Q Consensus 209 ~l~~Ll~~lkPr--y~FsGH~H~~-f~~~~------~~~~~~~~TRFlaL~k~~-----~~~k~l~a~~i~~ 266 (408)
...++.....+. -.|-||-|.+ |+.+- .++.-..+--+++..|.+ ..++|+-.+.|+.
T Consensus 246 ~~~~ir~~~p~t~IqviGGHshird~a~~d~~s~~l~~GrypetV~~~s~~~v~v~~~~a~~~y~g~i~~e~ 317 (602)
T KOG4419|consen 246 LHAEIRKVHPNTPIQVIGGHSHIRDFAVYDEKSVELESGRYPETVGWLSINKVGVVQANATRKYLGPITIEF 317 (602)
T ss_pred HHHHHhhhCCCCceEEECchhhhhhhhhcCCcccccccCCCcceeeeeeccCcceeeeeeeeeeeeeEEeeh
Confidence 344455554443 3688899954 54431 111111122334444333 4778888777754
No 149
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=21.94 E-value=72 Score=30.94 Aligned_cols=19 Identities=37% Similarity=0.552 Sum_probs=15.7
Q ss_pred CccEEEEecCccccCCcch
Q 015364 30 KIDLLLCCGDFQAVRNEND 48 (408)
Q Consensus 30 ~~DlLI~~GDf~~~~~~~d 48 (408)
.-|++|.+||+|+..+...
T Consensus 83 ~~Dliil~Gd~Q~~~~~gq 101 (258)
T COG2047 83 ERDLIILVGDTQATSSEGQ 101 (258)
T ss_pred CCcEEEEeccccccCcchh
Confidence 6799999999999766544
No 150
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=21.88 E-value=90 Score=26.39 Aligned_cols=39 Identities=31% Similarity=0.500 Sum_probs=22.5
Q ss_pred hHHHHHhhCCCCCCccEEEEcCCCCCh-hhHHHHhhCCccCC
Q 015364 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS-NYLWELYYGGWAAP 102 (408)
Q Consensus 62 ~dF~~y~~g~~~~pvpt~fI~GNHE~~-~~l~el~~gg~va~ 102 (408)
++-...++|.. .+|.+||+|.|=-. +.+.++...|.+.+
T Consensus 56 q~~l~~~tg~~--tvP~vFI~Gk~iGG~~dl~~lh~~G~L~~ 95 (104)
T KOG1752|consen 56 QKALKKLTGQR--TVPNVFIGGKFIGGASDLMALHKSGELVP 95 (104)
T ss_pred HHHHHHhcCCC--CCCEEEECCEEEcCHHHHHHHHHcCCHHH
Confidence 33343444554 57889999988432 44555555555433
No 151
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=20.75 E-value=2.1e+02 Score=30.79 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=16.1
Q ss_pred HHHHHHHHh-CCCEEEEcCCCCcc
Q 015364 209 PAAQLLEKL-KPSYWFSAHLHCKF 231 (408)
Q Consensus 209 ~l~~Ll~~l-kPry~FsGH~H~~f 231 (408)
.+..++.+. ..+.|||||.|...
T Consensus 389 eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 389 GLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred HHHHHHhcCCCeEEEEcCCccccc
Confidence 466666664 35679999999653
No 152
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=20.53 E-value=1e+02 Score=22.31 Aligned_cols=12 Identities=33% Similarity=0.880 Sum_probs=9.7
Q ss_pred CCccEEEEcCCC
Q 015364 74 APIPTIFIGGNH 85 (408)
Q Consensus 74 ~pvpt~fI~GNH 85 (408)
..+|++||+|+|
T Consensus 48 ~~~P~v~i~g~~ 59 (60)
T PF00462_consen 48 RTVPQVFIDGKF 59 (60)
T ss_dssp SSSSEEEETTEE
T ss_pred CccCEEEECCEE
Confidence 457999999975
Done!