Query 015366
Match_columns 408
No_of_seqs 77 out of 79
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 11:21:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015366.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015366hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t98_B Nucleoporin NUP58/NUP45 99.9 3.6E-27 1.2E-31 195.3 9.0 88 83-175 4-92 (93)
2 3uul_A Utrophin; spectrin repe 82.4 11 0.00038 29.2 9.5 25 93-117 4-28 (118)
3 3fav_B ESAT-6, 6 kDa early sec 81.1 8.8 0.0003 29.3 8.3 78 89-170 10-87 (94)
4 3htk_C E3 SUMO-protein ligase 79.9 7.6 0.00026 37.5 9.1 70 94-168 28-97 (267)
5 3uun_A Dystrophin; triple heli 79.9 12 0.0004 28.9 8.7 25 93-117 4-28 (119)
6 3zbh_A ESXA; unknown function, 78.9 12 0.00042 28.3 8.5 83 83-169 8-90 (99)
7 2dnx_A Syntaxin-12; snare, HAB 78.9 13 0.00046 31.4 9.4 65 89-163 12-76 (130)
8 2q12_A DIP13 alpha, DCC-intera 77.6 32 0.0011 31.2 12.2 31 84-114 14-44 (265)
9 1u5p_A Spectrin alpha chain, b 76.9 33 0.0011 29.2 11.6 25 93-117 5-29 (216)
10 2odv_A Plectin 1, HD1; plakin 75.0 16 0.00055 33.9 9.6 27 89-115 126-152 (235)
11 2iub_A CORA, divalent cation t 74.6 26 0.0009 33.5 11.3 29 89-117 186-214 (363)
12 3fav_A ESAT-6-like protein ESX 74.6 19 0.00066 27.9 8.7 77 89-169 12-88 (101)
13 2vs0_A Virulence factor ESXA; 73.4 17 0.00059 27.4 7.9 77 88-168 10-86 (97)
14 4ev6_A Magnesium transport pro 72.8 21 0.00072 33.8 10.0 29 88-116 161-189 (339)
15 4egw_A Magnesium transport pro 72.1 32 0.0011 31.4 10.8 28 89-116 162-189 (280)
16 3oja_B Anopheles plasmodium-re 72.0 34 0.0012 33.9 11.7 37 131-167 505-541 (597)
17 1u4q_A Spectrin alpha chain, b 71.0 56 0.0019 29.4 12.0 25 93-117 5-29 (322)
18 3f1i_H Hepatocyte growth facto 70.2 13 0.00043 31.4 6.9 48 97-145 3-51 (98)
19 3ghg_A Fibrinogen alpha chain; 68.5 40 0.0014 35.7 11.7 25 5-29 63-87 (562)
20 3hd7_B Syntaxin-1A; membrane p 67.6 28 0.00097 28.6 8.5 63 99-170 15-77 (109)
21 4ioe_A Secreted protein ESXB; 67.4 37 0.0013 25.5 9.6 77 86-166 11-87 (93)
22 3rip_A Gamma-tubulin complex c 67.2 37 0.0013 35.2 11.2 34 84-117 81-114 (677)
23 3lay_A Zinc resistance-associa 65.5 35 0.0012 30.7 9.4 78 78-171 65-142 (175)
24 1cun_A Protein (alpha spectrin 64.7 63 0.0022 27.2 12.0 24 93-116 2-25 (213)
25 3h6p_C ESAT-6-like protein ESX 64.7 9.9 0.00034 29.4 5.0 77 90-170 12-88 (96)
26 3oja_A Leucine-rich immune mol 63.7 1.1E+02 0.0038 29.7 14.4 72 84-171 407-478 (487)
27 3ajw_A Flagellar FLIJ protein; 61.8 56 0.0019 26.8 9.4 36 135-170 74-109 (150)
28 3a7p_A Autophagy protein 16; c 59.7 43 0.0015 30.1 8.7 74 89-171 66-139 (152)
29 3obv_E Protein diaphanous homo 59.6 87 0.003 31.6 12.0 73 93-174 283-355 (457)
30 3ghg_C Fibrinogen gamma chain; 59.6 28 0.00094 35.5 8.3 25 5-29 37-61 (411)
31 1v9d_A Diaphanous protein homo 58.7 82 0.0028 30.1 11.2 71 94-173 213-283 (340)
32 2spc_A Spectrin; cytoskeleton; 58.7 32 0.0011 26.6 7.0 25 93-117 5-29 (107)
33 4h8s_A DCC-interacting protein 56.9 73 0.0025 30.6 10.6 30 84-113 37-66 (407)
34 3efg_A Protein SLYX homolog; x 55.9 24 0.00083 28.0 5.8 50 105-163 14-63 (78)
35 3gwk_C SAG1039, putative uncha 55.8 65 0.0022 24.5 8.5 76 89-168 13-88 (98)
36 3edu_A Beta-I spectrin, spectr 51.3 16 0.00055 31.7 4.5 23 93-115 110-132 (218)
37 3ol1_A Vimentin; structural ge 49.1 66 0.0023 26.9 7.8 78 93-170 15-111 (119)
38 1ux5_A BNI1 protein; structura 49.0 1.6E+02 0.0054 28.7 11.6 77 94-175 294-370 (411)
39 1jth_B Syntaxin 1A; coiled-coi 48.9 56 0.0019 25.1 6.8 62 100-170 5-66 (77)
40 1hci_A Alpha-actinin 2; triple 48.8 42 0.0014 32.2 7.4 26 91-116 131-156 (476)
41 4i0x_A ESAT-6-like protein MAB 48.8 57 0.002 25.3 6.9 77 88-168 4-80 (94)
42 3r6n_A Desmoplakin; spectrin r 48.8 92 0.0032 31.5 10.2 68 98-169 9-82 (450)
43 1wfd_A Hypothetical protein 15 48.6 94 0.0032 24.8 8.3 24 95-118 30-53 (93)
44 1quu_A Human skeletal muscle a 48.3 74 0.0025 28.2 8.5 68 89-163 12-80 (250)
45 1sjj_A Actinin; 3-helix bundle 48.3 43 0.0015 35.0 7.9 28 90-117 369-396 (863)
46 2bbh_A Divalent cation transpo 48.2 1E+02 0.0035 27.6 9.4 28 89-116 177-204 (269)
47 1sfc_B Protein (syntaxin 1A), 47.7 67 0.0023 25.1 7.2 63 100-171 16-78 (83)
48 1s35_A Beta-I spectrin, spectr 47.6 90 0.0031 26.4 8.6 25 93-117 109-133 (214)
49 3ts9_A Interferon-induced heli 47.4 42 0.0014 29.7 6.5 74 101-184 36-115 (138)
50 1l8d_A DNA double-strand break 47.0 1.1E+02 0.0037 24.4 10.4 25 93-117 19-43 (112)
51 4i0x_B ESAT-6-like protein MAB 47.0 24 0.00081 27.9 4.5 79 87-168 14-93 (103)
52 2iak_A Bullous pemphigoid anti 46.7 1E+02 0.0034 27.0 9.0 71 93-170 22-110 (224)
53 2q13_A DCC-interacting protein 46.0 52 0.0018 31.4 7.5 31 84-114 14-44 (385)
54 3nvo_A Zinc transport protein 45.6 1.6E+02 0.0053 26.3 10.2 28 89-116 153-180 (264)
55 1sjj_A Actinin; 3-helix bundle 45.2 1.2E+02 0.0042 31.6 10.7 43 93-142 487-529 (863)
56 3b5n_B Protein SSO1; snare com 44.7 83 0.0028 23.7 7.1 62 100-170 5-66 (69)
57 4eve_A Neutrophil-activating p 44.7 1.5E+02 0.0052 25.5 9.9 72 89-160 53-135 (164)
58 3tnu_B Keratin, type II cytosk 44.3 1.4E+02 0.0048 24.9 9.7 68 89-168 41-108 (129)
59 3t98_B Nucleoporin NUP58/NUP45 44.3 15 0.00052 30.2 3.1 78 70-163 3-91 (93)
60 1cun_A Protein (alpha spectrin 44.1 93 0.0032 26.2 8.1 24 93-116 108-131 (213)
61 2j1d_G DAAM1, disheveled-assoc 44.0 79 0.0027 31.9 8.8 74 94-175 295-368 (483)
62 1o9r_A Agrobacterium tumefacie 43.7 1.5E+02 0.0051 25.1 9.9 71 89-159 48-129 (162)
63 3edv_A Spectrin beta chain, br 43.7 60 0.0021 29.3 7.3 22 93-114 115-136 (323)
64 1g8x_A Myosin II heavy chain f 43.7 25 0.00085 39.1 5.5 28 90-117 885-912 (1010)
65 2lw1_A ABC transporter ATP-bin 42.6 1.2E+02 0.0042 23.8 9.5 30 86-115 17-46 (89)
66 1m1j_B Fibrinogen beta chain; 42.5 74 0.0025 32.8 8.4 14 6-19 100-113 (464)
67 4a5x_A MITD1, MIT domain-conta 42.1 1E+02 0.0034 24.5 7.4 57 93-163 29-85 (86)
68 3tnu_A Keratin, type I cytoske 41.6 1.6E+02 0.0053 24.7 9.7 68 89-168 43-110 (131)
69 2fjc_A Antigen TPF1; mini ferr 41.5 1.6E+02 0.0055 24.8 9.7 71 89-159 44-125 (156)
70 3edv_A Spectrin beta chain, br 41.1 2E+02 0.0069 25.9 12.4 24 92-115 7-30 (323)
71 3tq2_A KE1; parallel three hel 41.1 32 0.0011 24.0 3.7 30 133-162 6-35 (36)
72 1n7s_B Syntaxin 1A; neuronal s 41.1 70 0.0024 24.0 6.1 56 100-164 7-62 (68)
73 4etr_A Putative uncharacterize 40.7 76 0.0026 26.9 7.0 51 92-151 42-92 (153)
74 1hlo_A Protein (transcription 40.5 1.2E+02 0.0042 23.3 7.9 58 98-164 22-79 (80)
75 3ck6_A Putative membrane trans 40.5 69 0.0024 28.5 7.0 25 89-113 142-166 (252)
76 4i0x_B ESAT-6-like protein MAB 39.7 1.2E+02 0.0042 23.7 7.7 78 93-186 13-97 (103)
77 3nvo_A Zinc transport protein 39.3 1.7E+02 0.0056 26.1 9.3 17 100-116 157-173 (264)
78 3rrk_A V-type ATPase 116 kDa s 38.9 1.6E+02 0.0054 27.7 9.6 73 87-164 56-128 (357)
79 1wlq_A Geminin; coiled-coil; 2 38.4 65 0.0022 26.4 5.8 28 134-161 54-81 (83)
80 2hn1_A CORA, magnesium and cob 38.2 95 0.0032 27.9 7.6 29 89-117 178-206 (266)
81 2p90_A Hypothetical protein CG 37.0 28 0.00094 33.7 4.1 40 131-170 256-306 (319)
82 4etp_A Kinesin-like protein KA 36.9 78 0.0027 31.4 7.4 39 130-168 5-43 (403)
83 1zme_C Proline utilization tra 36.8 42 0.0014 24.3 4.2 24 92-115 45-68 (70)
84 1nkp_B MAX protein, MYC proto- 36.6 53 0.0018 25.4 5.0 31 88-118 51-81 (83)
85 3kbt_A Beta-I spectrin, spectr 36.6 1.2E+02 0.0043 27.2 8.2 24 93-116 6-29 (326)
86 2dl1_A Spartin; SPG20, MIT, st 36.4 1.1E+02 0.0039 26.2 7.3 23 97-119 39-61 (116)
87 3swy_A Cyclic nucleotide-gated 36.1 45 0.0016 24.5 4.2 26 89-114 21-46 (46)
88 2wvr_A Geminin; DNA replicatio 35.8 80 0.0027 29.7 6.8 78 75-166 86-163 (209)
89 3tq2_A KE1; parallel three hel 35.7 26 0.0009 24.4 2.6 21 150-170 2-22 (36)
90 2xgw_A Peroxide resistance pro 35.6 2.4E+02 0.0084 25.2 10.0 72 89-160 74-157 (199)
91 2vs0_A Virulence factor ESXA; 35.6 74 0.0025 23.8 5.5 73 88-164 17-89 (97)
92 3oja_B Anopheles plasmodium-re 35.0 2.7E+02 0.0094 27.4 11.0 31 140-170 535-565 (597)
93 1deq_A Fibrinogen (alpha chain 35.0 71 0.0024 32.5 6.7 24 89-112 54-81 (390)
94 3kwo_A Putative bacterioferrit 34.9 2E+02 0.0069 24.1 10.1 72 89-160 36-118 (152)
95 1hci_A Alpha-actinin 2; triple 34.2 2.3E+02 0.0077 27.1 9.9 23 94-116 370-392 (476)
96 3gwk_C SAG1039, putative uncha 34.1 1.4E+02 0.0048 22.6 7.0 70 89-162 20-89 (98)
97 2z90_A Starvation-inducible DN 33.9 2.2E+02 0.0075 24.2 10.5 72 89-160 49-131 (161)
98 1lwu_C Fibrinogen gamma chain; 33.6 83 0.0028 30.9 6.9 15 148-162 39-53 (323)
99 1l8d_A DNA double-strand break 33.2 72 0.0025 25.4 5.4 24 90-113 23-46 (112)
100 3pdy_A Plectin; cytoskeleton, 33.1 2.4E+02 0.0083 24.5 10.2 70 97-170 11-95 (210)
101 2c2j_A DNA-binding stress resp 32.9 2.1E+02 0.0072 26.0 9.1 70 89-158 78-158 (211)
102 2wlu_A DPS-like peroxide resis 32.3 2.5E+02 0.0085 24.3 10.0 72 89-160 58-141 (175)
103 1pwb_A SP-D, PSP-D, pulmonary 31.7 44 0.0015 28.1 4.1 23 91-113 31-53 (177)
104 3f31_A Spectrin alpha chain, b 31.3 2.2E+02 0.0076 23.5 8.5 61 93-165 48-108 (149)
105 3zbh_A ESXA; unknown function, 31.1 97 0.0033 23.2 5.6 69 89-161 21-89 (99)
106 3iq1_A DPS family protein; csg 31.1 2.4E+02 0.0082 23.8 10.4 72 89-160 49-130 (159)
107 2ke4_A CDC42-interacting prote 31.0 1E+02 0.0035 25.4 6.0 64 89-163 20-83 (98)
108 3r2p_A Apolipoprotein A-I; amp 30.9 29 0.00099 30.6 2.9 20 8-27 23-42 (185)
109 2chp_A MRGA, metalloregulation 30.3 2.4E+02 0.0083 23.6 9.8 70 89-158 43-122 (153)
110 4eah_A Formin-like protein 3, 30.2 2.3E+02 0.0079 27.9 9.5 65 93-175 289-353 (402)
111 1k1f_A Breakpoint cluster regi 30.1 48 0.0017 26.5 3.7 23 93-115 28-50 (72)
112 3lbx_B Beta-I spectrin, spectr 30.0 2.1E+02 0.007 24.2 8.0 25 93-117 6-30 (185)
113 3u06_A Protein claret segregat 29.5 1.2E+02 0.0042 30.2 7.5 22 94-115 6-27 (412)
114 4ioe_A Secreted protein ESXB; 29.2 1.4E+02 0.0049 22.2 6.2 30 132-161 60-89 (93)
115 2yw6_A DNA protection during s 29.1 2.9E+02 0.0099 24.1 9.5 69 89-157 47-126 (183)
116 3k29_A Putative uncharacterize 28.5 3.4E+02 0.012 24.7 13.0 38 134-171 70-107 (169)
117 3lbx_A Spectrin alpha chain, e 28.2 2.7E+02 0.0092 23.5 9.7 60 93-164 58-117 (161)
118 1m1j_C Fibrinogen gamma chain; 28.1 1.7E+02 0.0057 29.6 8.1 95 5-147 37-131 (409)
119 3kbt_A Beta-I spectrin, spectr 27.9 3.3E+02 0.011 24.4 12.5 23 94-116 113-135 (326)
120 1uii_A Geminin; human, DNA rep 27.1 1.1E+02 0.0039 25.0 5.5 31 75-109 17-47 (83)
121 3swf_A CGMP-gated cation chann 27.1 76 0.0026 25.5 4.4 28 89-116 23-50 (74)
122 3fb2_A Spectrin alpha chain, b 27.0 3E+02 0.01 23.6 12.3 25 93-117 15-39 (218)
123 2cpt_A SKD1 protein, vacuolar 26.7 2.8E+02 0.0095 23.1 9.6 23 95-117 33-55 (117)
124 1gl2_B Syntaxin 7; membrane pr 26.1 95 0.0032 23.2 4.6 35 130-164 25-59 (65)
125 2b0h_A Talin-1; vinculin, heli 25.4 3.4E+02 0.012 23.6 11.1 83 92-182 13-112 (137)
126 2zsh_B Della protein GAI; plan 25.2 52 0.0018 28.2 3.3 45 98-142 38-86 (110)
127 1fzc_B Fibrin; blood coagulati 25.1 86 0.0029 30.7 5.3 26 136-161 31-56 (328)
128 1s35_A Beta-I spectrin, spectr 25.1 3.1E+02 0.011 23.1 10.3 24 94-117 3-26 (214)
129 4ghu_A TNF receptor-associated 25.0 72 0.0025 28.3 4.4 30 89-118 5-34 (198)
130 3ibp_A Chromosome partition pr 24.9 1.4E+02 0.0047 29.5 6.6 55 78-149 208-263 (302)
131 3viq_B Mating-type switching p 24.5 1.2E+02 0.0042 24.7 5.3 44 95-143 5-50 (85)
132 4ani_A Protein GRPE; chaperone 24.4 1.3E+02 0.0045 27.9 6.1 34 138-171 62-95 (213)
133 2v6x_A Vacuolar protein sortin 24.3 2.4E+02 0.0083 21.6 8.1 23 95-117 28-50 (85)
134 1dkg_A Nucleotide exchange fac 24.2 1.4E+02 0.0049 27.0 6.3 51 129-179 91-149 (197)
135 3eab_A Spastin; spastin, MIT, 24.1 3E+02 0.01 22.6 8.2 20 100-119 39-58 (89)
136 1nkp_B MAX protein, MYC proto- 23.8 2.5E+02 0.0085 21.6 8.9 65 98-171 12-76 (83)
137 2yjk_A AFP, DPS; metal-binding 23.8 3.3E+02 0.011 23.0 8.8 30 89-118 51-81 (161)
138 2pnv_A Small conductance calci 23.3 86 0.0029 22.7 3.7 23 94-116 19-41 (43)
139 3mq9_A Bone marrow stromal ant 23.2 3.8E+02 0.013 25.8 9.5 30 76-106 363-392 (471)
140 2d4x_A Flagellar HOOK-associat 23.2 2E+02 0.007 25.7 7.1 75 97-180 18-99 (248)
141 3r6n_A Desmoplakin; spectrin r 23.2 1.4E+02 0.0048 30.2 6.6 23 95-117 203-225 (450)
142 1gax_A Valrs, valyl-tRNA synth 23.1 2.5E+02 0.0084 30.6 8.8 63 89-160 798-860 (862)
143 1go4_E MAD1 (mitotic arrest de 23.0 2.1E+02 0.0071 24.0 6.5 26 89-114 17-42 (100)
144 2cf7_A DPR; peroxide resistanc 22.8 3.6E+02 0.012 23.0 10.0 71 89-159 48-130 (165)
145 3iqc_A FLIS, flagellar protein 22.8 2.6E+02 0.0089 23.6 7.3 36 132-167 80-124 (131)
146 2c2u_A DPS, DNA-binding stress 22.3 4.3E+02 0.015 23.8 9.3 69 89-157 91-170 (207)
147 2gyq_A YCFI, putative structur 21.9 1.7E+02 0.0059 25.9 6.2 48 91-142 46-93 (173)
148 1ca9_A TRAF2, protein (TNF rec 21.9 77 0.0026 27.4 3.9 30 88-117 7-36 (192)
149 2gs4_A Protein YCIF; stress pr 21.8 2.2E+02 0.0075 25.0 6.8 28 91-118 39-67 (166)
150 3efg_A Protein SLYX homolog; x 21.8 1.2E+02 0.004 24.0 4.6 22 93-114 16-37 (78)
151 1vcs_A Vesicle transport throu 21.7 3.2E+02 0.011 22.0 8.5 25 91-115 38-62 (102)
152 2a01_A Apolipoprotein A-I; fou 21.6 4.2E+02 0.014 24.2 9.0 23 85-107 97-119 (243)
153 2bk6_A Non-heme iron-containin 21.6 3.6E+02 0.012 22.6 10.0 72 89-160 39-122 (156)
154 3edu_A Beta-I spectrin, spectr 21.6 3.8E+02 0.013 22.9 12.5 24 93-116 3-26 (218)
155 2wam_A RV2714, conserved hypot 21.4 57 0.002 32.2 3.3 65 100-170 271-343 (351)
156 2kvp_A Talin-1; VBS, vinculin, 21.2 3.5E+02 0.012 24.2 8.0 53 93-153 42-94 (165)
157 2ykt_A Brain-specific angiogen 20.5 2.3E+02 0.0078 26.5 7.0 25 88-112 100-124 (253)
158 3c98_B Syntaxin-1A; protein co 20.4 3.7E+02 0.013 23.2 8.0 28 86-114 43-70 (279)
159 4ani_A Protein GRPE; chaperone 20.4 2.5E+02 0.0086 26.0 7.2 27 144-170 61-87 (213)
160 3s84_A Apolipoprotein A-IV; fo 20.1 5.5E+02 0.019 24.1 9.8 21 86-106 32-52 (273)
161 2ke4_A CDC42-interacting prote 20.1 3.3E+02 0.011 22.3 7.1 60 96-168 13-81 (98)
162 2er8_A Regulatory protein Leu3 20.1 82 0.0028 23.0 3.2 20 98-117 49-68 (72)
No 1
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=99.94 E-value=3.6e-27 Score=195.29 Aligned_cols=88 Identities=32% Similarity=0.483 Sum_probs=78.7
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 83 KKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMK 162 (408)
Q Consensus 83 ~~PSpFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lK 162 (408)
..|++||+++|++||+||++||+||||||+||.+.+. +++. +||+|+.+|+++|++||+||+||+.||++|+.+|
T Consensus 4 ~~P~~yF~~lv~~fe~rL~~Yr~~IeelE~~L~s~s~--~~~~---Tpq~L~~~l~~~h~~FiaLAa~l~~lH~~V~~~K 78 (93)
T 3t98_B 4 MAPADYFRVLVQQFEVQLQQYRQQIEELENHLATQAN--NSHI---TPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLK 78 (93)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH--HTTS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999987642 4444 4999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCC
Q 015366 163 TAYLADQRR-RGDG 175 (408)
Q Consensus 163 E~YL~~rRr-~GD~ 175 (408)
++||++||+ +||.
T Consensus 79 e~Yl~~rr~~~~d~ 92 (93)
T 3t98_B 79 EQYLSYRKMFLGDA 92 (93)
T ss_dssp HHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhccC
Confidence 999999995 8875
No 2
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=82.40 E-value=11 Score=29.18 Aligned_cols=25 Identities=16% Similarity=0.300 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+.+|+..|..+..||.+.|..|...
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~ 28 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQ 28 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999754
No 3
>3fav_B ESAT-6, 6 kDa early secretory antigenic target; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_B
Probab=81.12 E-value=8.8 Score=29.29 Aligned_cols=78 Identities=6% Similarity=0.032 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~ 168 (408)
+...+.++.....+++..+++|+..+......=. + .+-+.-...+.+.++.+..|-.-|+.|.+.|.+..+.|-+.
T Consensus 10 l~~~a~~~~~~~~~i~~~l~~l~~~v~~l~~~W~-G---~A~~af~~~~~~w~~~~~~~~~~L~~i~~~l~~~~~~y~~~ 85 (94)
T 3fav_B 10 IEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWG-G---SGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMAST 85 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGT-C---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC-c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999966542111 1 23466677888888888888888888888888888877665
Q ss_pred Hh
Q 015366 169 QR 170 (408)
Q Consensus 169 rR 170 (408)
-+
T Consensus 86 d~ 87 (94)
T 3fav_B 86 EG 87 (94)
T ss_dssp --
T ss_pred HH
Confidence 43
No 4
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=79.89 E-value=7.6 Score=37.49 Aligned_cols=70 Identities=7% Similarity=0.114 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~ 168 (408)
.+.-..++.|++||+|.=..|....+.+.. -+.++.+-|.+.+.-++++..+...+..+++++|+.|...
T Consensus 28 ~d~s~~~~~~~~q~~~~l~~~~~~~~~~~~-----~~~~~v~~l~~~y~~l~~~~~~~~~~~~~~~~~K~~yk~~ 97 (267)
T 3htk_C 28 RDLSNIYQQCYKQIDETINQLVDSTSPSTI-----GIEEQVADITSTYKLLSTYESESNSFDEHIKDLKKNFKQS 97 (267)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCCCSS-----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCcc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344566778888887754444333332221 1678889999999999999999999999999999999987
No 5
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=79.85 E-value=12 Score=28.94 Aligned_cols=25 Identities=20% Similarity=0.442 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+.+|+..+..+..||.+.|..|...
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~ 28 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQ 28 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999654
No 6
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=78.86 E-value=12 Score=28.29 Aligned_cols=83 Identities=11% Similarity=0.063 Sum_probs=56.8
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 83 KKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMK 162 (408)
Q Consensus 83 ~~PSpFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lK 162 (408)
+...+=+.+++.+|...-.+++..+++|++.+..+.+. =.+ .+-+.-...++..+..+-.+...|+.|.+.+....
T Consensus 8 ~v~~~~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L~~~-W~G---~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a 83 (99)
T 3zbh_A 8 RLTPEELRGVARQYNVESSNVTELIARLDQMSHTLQGI-WEG---ASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSA 83 (99)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445577788888888888888888888888654220 011 22355566777777777777777888888887777
Q ss_pred HHHHHHH
Q 015366 163 TAYLADQ 169 (408)
Q Consensus 163 E~YL~~r 169 (408)
+.|-+.-
T Consensus 84 ~~~~~~d 90 (99)
T 3zbh_A 84 TILEDTD 90 (99)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776553
No 7
>2dnx_A Syntaxin-12; snare, HABC domain, UP and DOWN three helix bundle, LEFT-handed twist, membrane fusion, vesicle transport, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.85 E-value=13 Score=31.39 Aligned_cols=65 Identities=8% Similarity=0.101 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE 163 (408)
|..+.+.-...+..+-+.|-.||+.+...+. +.|-+..-+++|+.....-..+..+.+.|+++.+
T Consensus 12 f~~l~~~is~~I~~In~~vs~l~r~v~~LGT----------~kDt~~LR~kl~~~~~~t~~l~k~ts~~lk~L~~ 76 (130)
T 2dnx_A 12 FSSIIQTCSGNIQRISQATAQIKNLMSQLGT----------KQDSSKLQENLQQLQHSTNQLAKETNELLKELGS 76 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS----------SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5778999999999999999999999977743 4555666666666665555555555555555544
No 8
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=77.63 E-value=32 Score=31.24 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=28.6
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQLI 114 (408)
Q Consensus 84 ~PSpFF~elV~~FEerL~~yRQqIEELEr~L 114 (408)
.=||.|..+|..||+++...+.||+.|.+..
T Consensus 14 ~DSP~FR~~l~~~E~~~~~l~~~l~kl~k~~ 44 (265)
T 2q12_A 14 EDSPQTRSLLGVFEEDATAISNYMNQLYQAM 44 (265)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998866
No 9
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=76.93 E-value=33 Score=29.22 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
..+|+..+..+..||+++|..|...
T Consensus 5 ~~~F~~~~~~l~~Wl~~~e~~l~~~ 29 (216)
T 1u5p_A 5 QQNFNTGIKDFDFWLSEVEALLASE 29 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 4789999999999999999999654
No 10
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=74.95 E-value=16 Score=33.92 Aligned_cols=27 Identities=19% Similarity=0.316 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLIL 115 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~ 115 (408)
+.+++.+|......+..|+.++++.|+
T Consensus 126 Le~La~kf~rka~~~e~~L~~~~~~L~ 152 (235)
T 2odv_A 126 LQRIVTKLQMEAGLAEEQLNQADALLQ 152 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999999999994
No 11
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=74.62 E-value=26 Score=33.55 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+..+|++|..-+..+..+||+||..+...
T Consensus 186 ld~ivd~y~~~l~~l~~~id~lE~~v~~~ 214 (363)
T 2iub_A 186 IDALVDDYFVLLEKIDDEIDVLEEEVLER 214 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34678999999999999999999988543
No 12
>3fav_A ESAT-6-like protein ESXB; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_A
Probab=74.58 E-value=19 Score=27.94 Aligned_cols=77 Identities=12% Similarity=0.127 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~ 168 (408)
+...+.+++..-.+++..+++|+..+..+...= .+ .+-+.-...+.+.++.+..|..-|+.|.+.|....+.|-+.
T Consensus 12 l~~~A~~~~~~~~~l~~~l~~l~~~~~~L~~~W-~G---~A~~af~~~~~~w~~~~~~l~~~L~~i~~~l~~~a~~y~~~ 87 (101)
T 3fav_A 12 LAQEAGNFERISGDLKTQIDQVESTAGSLQGQW-RG---AAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRA 87 (101)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-ch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999996654311 11 23355566777777777788888888888888887777655
Q ss_pred H
Q 015366 169 Q 169 (408)
Q Consensus 169 r 169 (408)
-
T Consensus 88 d 88 (101)
T 3fav_A 88 D 88 (101)
T ss_dssp -
T ss_pred H
Confidence 3
No 13
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=73.36 E-value=17 Score=27.36 Aligned_cols=77 Identities=10% Similarity=0.058 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (408)
Q Consensus 88 FF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~ 167 (408)
=+..++.+|...-.+++..+++|++.+..+.+. =.+ .+-+.-.......+..+-.+..-|+.+-+.+....+.|-+
T Consensus 10 ~l~~~A~~~~~~~~~l~~~l~~L~~~~~~L~~~-W~G---~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~y~~ 85 (97)
T 2vs0_A 10 EIRAKSQSYGQGSDQIRQILSDLTRAQGEIAAN-WEG---QAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQE 85 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCS---STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367778889888899999999999888654210 011 1234455566677777777766777777777776666654
Q ss_pred H
Q 015366 168 D 168 (408)
Q Consensus 168 ~ 168 (408)
.
T Consensus 86 ~ 86 (97)
T 2vs0_A 86 Q 86 (97)
T ss_dssp -
T ss_pred H
Confidence 4
No 14
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=72.77 E-value=21 Score=33.83 Aligned_cols=29 Identities=24% Similarity=0.412 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 88 FLQQTVARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 88 FF~elV~~FEerL~~yRQqIEELEr~L~s 116 (408)
.+..+|++|..-+..+..+|+++|..+..
T Consensus 161 lld~ivd~~~~~l~~l~~~i~~lE~~l~~ 189 (339)
T 4ev6_A 161 ILNEITRSYSRILMNLEDELEELEDKLLA 189 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 35678999999999999999999998853
No 15
>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii}
Probab=72.08 E-value=32 Score=31.43 Aligned_cols=28 Identities=25% Similarity=0.414 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s 116 (408)
+..+|++|..-|..+..+|++||..+..
T Consensus 162 ld~ivd~y~~~l~~i~~~id~lE~~l~~ 189 (280)
T 4egw_A 162 LNEITRSYSRILMNLEDELEELEDKLLA 189 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999999999999999998854
No 16
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=72.00 E-value=34 Score=33.92 Aligned_cols=37 Identities=5% Similarity=0.026 Sum_probs=28.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 131 QSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (408)
Q Consensus 131 Q~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~ 167 (408)
+.+...++++.+-.-.+..+++.+++++++.++.|-+
T Consensus 505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
T 3oja_B 505 DNLNKVFTHLKERQAFKLRETQARRTEADAKQKETED 541 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhh
Confidence 5667777777777777778888888888888888875
No 17
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=71.01 E-value=56 Score=29.38 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
...|+..+..+..||+++|..|...
T Consensus 5 ~~~F~~~~~~l~~Wl~~~e~~l~~~ 29 (322)
T 1u4q_A 5 QQNFNTGIKDFDFWLSEVEALLASE 29 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5689999999999999999999753
No 18
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=70.24 E-value=13 Score=31.43 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc-cccchHHHHHHHHHHHH
Q 015366 97 EKYLGEFRQWIEELEQLILLDPDRNSSSHGSS-LLQSLPQVISNVHIFFV 145 (408)
Q Consensus 97 EerL~~yRQqIEELEr~L~s~s~~~~S~itss-aPQ~L~~aL~n~Hq~FV 145 (408)
|+=+..+|.++|-..+-|++.+. ++.++..+ +.|.|=..|.++|-..+
T Consensus 3 ~ef~~~l~~sv~if~NRmksn~~-RGrsi~nDssVQsLF~~lt~MH~~Ll 51 (98)
T 3f1i_H 3 EQFLKALQNAVTTFVNRMKSNHM-RGRSITNDSAVLSLFQSINGMHPQLL 51 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HTCCGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 45566778888888888876543 23333322 56777666666665444
No 19
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=68.54 E-value=40 Score=35.67 Aligned_cols=25 Identities=4% Similarity=-0.004 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHhh
Q 015366 5 KAQLQERMAVVKDMLRNTEIAVRSF 29 (408)
Q Consensus 5 k~~lqeL~~~V~~mlrntE~AvRsf 29 (408)
+.+|.||+..|.|+-+|.-.+-..|
T Consensus 63 tkrINELKnqLEdlsKnsKdseqy~ 87 (562)
T 3ghg_A 63 TNRINKLKNSLFEYQKNNKDSHSLT 87 (562)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhchhHHHHH
Confidence 4567788888887777766665543
No 20
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=67.59 E-value=28 Score=28.63 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 99 YLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (408)
Q Consensus 99 rL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rR 170 (408)
++++-.+.|.++|+-+.-.. ...++|...++.|.+..-.+-..++..+++|++.+++-....|
T Consensus 15 ~i~eR~~eI~~Ie~~I~eL~---------~iF~dla~lV~eQge~Id~Ie~nv~~a~~~v~~g~~eL~kA~~ 77 (109)
T 3hd7_B 15 EIETRHSEIIKLENSIRELH---------DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK 77 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666666664332 2366778888888888888888888888887777666554433
No 21
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=67.35 E-value=37 Score=25.50 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 86 SAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAY 165 (408)
Q Consensus 86 SpFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~Y 165 (408)
.+=+..+..+|...-.+++..+..|++.+..+.+.= .+ .+-+......+..+..+-.+...|+.|.+.+...-+.|
T Consensus 11 ~e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L~~~W-~G---~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~A~~~ 86 (93)
T 4ioe_A 11 PEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQW-AG---ATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIADKF 86 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSS-CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-Cc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344677889999999999999999999997764311 11 12333344444444444444444555555544444444
Q ss_pred H
Q 015366 166 L 166 (408)
Q Consensus 166 L 166 (408)
-
T Consensus 87 ~ 87 (93)
T 4ioe_A 87 R 87 (93)
T ss_dssp H
T ss_pred H
Confidence 3
No 22
>3rip_A Gamma-tubulin complex component 4; helix bundles, gamma-tubulin ring complex, gamma-TURC, struc protein; 2.30A {Homo sapiens}
Probab=67.15 E-value=37 Score=35.20 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=30.0
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 84 ~PSpFF~elV~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
....|.+-+.+-.++.|..|++.|.+||+.+...
T Consensus 81 ~~g~v~~Al~~~i~~~L~~Y~~~i~~lE~~~l~~ 114 (677)
T 3rip_A 81 LHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGD 114 (677)
T ss_dssp SCSHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3467999999999999999999999999988643
No 23
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=65.46 E-value=35 Score=30.72 Aligned_cols=78 Identities=17% Similarity=0.033 Sum_probs=46.3
Q ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 78 YRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 78 ys~~p~~PSpFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-.=.-.=++++.++|.+++...|++|.+...-|..+-. .... . ..++ -+|+.++..|+++
T Consensus 65 ~LnLT~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~-a~~~-D-------eakI-------~aL~~Ei~~Lr~q 128 (175)
T 3lay_A 65 GSPLTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLT-ASSP-D-------TAKI-------NAVAKEMESLGQK 128 (175)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSSC-C-------HHHH-------HHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC-C-------HHHH-------HHHHHHHHHHHHH
Confidence 444433333456778888888888888887766666644321 0111 1 2233 3456677777888
Q ss_pred HHHHHHHHHHHHhh
Q 015366 158 VETMKTAYLADQRR 171 (408)
Q Consensus 158 Ve~lKE~YL~~rRr 171 (408)
+.+.+..|.+..+.
T Consensus 129 L~~~R~k~~~em~K 142 (175)
T 3lay_A 129 LDEQRVKRDVAMAQ 142 (175)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777776664
No 24
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=64.74 E-value=63 Score=27.23 Aligned_cols=24 Identities=25% Similarity=0.457 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 93 VARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s 116 (408)
+.+|+.++.....||++.|..+..
T Consensus 2 l~qf~~~~~~~~~Wl~e~e~~l~~ 25 (213)
T 1cun_A 2 VHQFFRDMDDEESWIKEKKLLVSS 25 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHhHHHHHHHHhcC
Confidence 568999999999999999998754
No 25
>3h6p_C ESAT-6-like protein ESXR; four-helix bundle, structural genomics, PSI-2, protein struc initiative, TB structural genomics consortium; 1.91A {Mycobacterium tuberculosis} PDB: 2kg7_B 3q4h_B
Probab=64.71 E-value=9.9 Score=29.45 Aligned_cols=77 Identities=9% Similarity=0.012 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 90 QQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQ 169 (408)
Q Consensus 90 ~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~r 169 (408)
..++.++.....+++..+++|+..|..+...-.+ .+-..-..+..+.++.+..|-.-|+.|.+.|++..+.|-..-
T Consensus 12 ~~~a~~i~~~~~~i~~~l~~l~~~v~~L~~~W~G----~A~~ay~~~~~~W~~~~~~l~~~L~~i~~~l~~a~~~y~~~d 87 (96)
T 3h6p_C 12 MAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQG----DTGITYQGWQTQWNQALEDLVRAYQSMSGTHESNTMAMLARD 87 (96)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHTGGGCCT----TSSSCHHHHHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557788888888888889999888665331111 234666777888888888888788888877777777776554
Q ss_pred h
Q 015366 170 R 170 (408)
Q Consensus 170 R 170 (408)
+
T Consensus 88 ~ 88 (96)
T 3h6p_C 88 G 88 (96)
T ss_dssp -
T ss_pred H
Confidence 3
No 26
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=63.68 E-value=1.1e+02 Score=29.72 Aligned_cols=72 Identities=10% Similarity=-0.003 Sum_probs=56.2
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (408)
Q Consensus 84 ~PSpFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE 163 (408)
-+..|+.+.+.++|+-.++..+.+|.+++.+... ....+++-+-...+.-.++.+..++++.++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (487)
T 3oja_A 407 SPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMY----------------QHKETQLAEENARLKKLNGEADLALASANA 470 (487)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhh----------------hhHHHHHHHHhhhhhhhhhhhhhhhHhccc
Confidence 3467788889999988888777777766666422 456667777777888889999999999999
Q ss_pred HHHHHHhh
Q 015366 164 AYLADQRR 171 (408)
Q Consensus 164 ~YL~~rRr 171 (408)
.|.+..++
T Consensus 471 ~~~~~~~~ 478 (487)
T 3oja_A 471 TLQELVVR 478 (487)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998776
No 27
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=61.82 E-value=56 Score=26.75 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 135 QVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (408)
Q Consensus 135 ~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rR 170 (408)
.-+..+.+.....-..|......|+..++.+++.++
T Consensus 74 ~fi~~L~~~I~~q~~~l~~~~~~~e~~r~~l~~a~~ 109 (150)
T 3ajw_A 74 QFIQTLEKAIEQHRLQLTQWTQKVDLALKSWREKKQ 109 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555555667777778888888887766
No 28
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=59.66 E-value=43 Score=30.06 Aligned_cols=74 Identities=19% Similarity=0.175 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~ 168 (408)
..+.+...++.+...+..|.++|.-|.... -..+.|..-+..++--+..+-.++..|.++.+++=+.++..
T Consensus 66 ~~~~I~~L~~El~~l~~ki~dLeeel~eK~---------K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~r 136 (152)
T 3a7p_A 66 LLNTLAILQKELKSKEQEIRRLKEVIALKN---------KNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKK 136 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999988886432 12455566666666666666666666666666666666655
Q ss_pred Hhh
Q 015366 169 QRR 171 (408)
Q Consensus 169 rRr 171 (408)
..+
T Consensus 137 k~q 139 (152)
T 3a7p_A 137 TEK 139 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 29
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=59.63 E-value=87 Score=31.58 Aligned_cols=73 Identities=12% Similarity=0.152 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRR 172 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr~ 172 (408)
++..+.++..+++.|+.+|+.+..... ... +. ...+..+.++.-....+++.|.+..+++.+.|.+...+.
T Consensus 283 ~~~l~~dl~~L~~~l~~v~~~l~~~~~--~~~-----~~--d~f~~~m~~Fl~~A~~~~~~L~~~~~~~~~~~~~l~~yF 353 (457)
T 3obv_E 283 AENLQKSLDQMKKQIADVERDVQNFPA--ATD-----EK--DKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYF 353 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCC--CSS-----TT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC--Ccc-----hh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356778888999999999998864421 100 11 112334444444556788889888999999999999987
Q ss_pred CC
Q 015366 173 GD 174 (408)
Q Consensus 173 GD 174 (408)
|.
T Consensus 354 ge 355 (457)
T 3obv_E 354 VF 355 (457)
T ss_dssp TC
T ss_pred CC
Confidence 73
No 30
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=59.56 E-value=28 Score=35.46 Aligned_cols=25 Identities=12% Similarity=0.116 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHhh
Q 015366 5 KAQLQERMAVVKDMLRNTEIAVRSF 29 (408)
Q Consensus 5 k~~lqeL~~~V~~mlrntE~AvRsf 29 (408)
+..|++|...|.+.-+.|-.|-..-
T Consensus 37 ~~~l~~L~~~l~~isn~Ts~~~~~v 61 (411)
T 3ghg_C 37 DKDLQSLEDILHQVENKTSEVKQLI 61 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHH
Confidence 4578899888888888877776643
No 31
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=58.72 E-value=82 Score=30.08 Aligned_cols=71 Identities=13% Similarity=0.185 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRRG 173 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr~G 173 (408)
+..++.|..+++.|..+|+.+..... ..+. -... .+.+.++.-....++..|.+..+++++.|.+...+.|
T Consensus 213 ~~l~~~l~~l~~~~~~~~~~l~~~~~--~~~~----~d~f---~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfg 283 (340)
T 1v9d_A 213 ENLQKSLDQMKKQIADVERDVQNFPA--ATDE----KDKF---VEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFV 283 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCC--CSSS----SCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc--ccch----hHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56778899999999999998864421 1110 1122 2333444445556788888888899999999999866
No 32
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=58.70 E-value=32 Score=26.64 Aligned_cols=25 Identities=12% Similarity=0.255 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+.+|+.++.+...||.+-|..|...
T Consensus 5 lq~F~~d~~~~e~Wl~~~e~~l~~~ 29 (107)
T 2spc_A 5 LQLYMRDCELAESWMSAREAFLNAD 29 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 5789999999999999999888643
No 33
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=56.92 E-value=73 Score=30.62 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=26.2
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQL 113 (408)
Q Consensus 84 ~PSpFF~elV~~FEerL~~yRQqIEELEr~ 113 (408)
.=||.|..+|..||+++...++||+.|-+.
T Consensus 37 ~DSP~FRa~l~~~E~~~~~l~~~l~kl~k~ 66 (407)
T 4h8s_A 37 QDSPQTRSLLSVFEEDAGTLTDYTNQLLQA 66 (407)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999988877664
No 34
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=55.92 E-value=24 Score=28.01 Aligned_cols=50 Identities=12% Similarity=0.187 Sum_probs=26.2
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 105 QWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (408)
Q Consensus 105 QqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE 163 (408)
+.|++||-.+.-.. ...++|..+|-.+.+-.-.|..++..|.++++++..
T Consensus 14 ~Ri~~LE~klAfqE---------~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~ 63 (78)
T 3efg_A 14 ARLVELETRLSFQE---------QALTELSEALADARLTGARNAELIRHLLEDLGKVRS 63 (78)
T ss_dssp HHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44555555554331 124556666666666666666666666666655543
No 35
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=55.84 E-value=65 Score=24.50 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~ 168 (408)
+..+..+|...-.++++.+..|++.+....+ .=.+. +-+.-....+..+..+-.+...|+.|-+.+....+.|-+.
T Consensus 13 l~~~A~~~~~~~~~i~~~l~~L~~~~~~l~~-~W~G~---a~~aF~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~~ 88 (98)
T 3gwk_C 13 LRSSAQKYTAGSQQVTEVLNLLTQEQAVIDE-NWDGS---TFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQT 88 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HBCSS---TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777777777777777754321 00111 1244455666666666666666666666666666666554
No 36
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=51.32 E-value=16 Score=31.73 Aligned_cols=23 Identities=17% Similarity=0.111 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 015366 93 VARFEKYLGEFRQWIEELEQLIL 115 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~ 115 (408)
+.+|..++.+...||++.|..|.
T Consensus 110 ~~~F~~~~~e~~~Wl~ek~~~l~ 132 (218)
T 3edu_A 110 LHRYFYTGAEILGLIDEKHRELP 132 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCC
Confidence 45677778888889999888883
No 37
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=49.14 E-value=66 Score=26.90 Aligned_cols=78 Identities=18% Similarity=0.248 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH---Hhhc--CCC---------CCC-----CCCCcccccchHHHHHHHHHHHHHHHHHHHH
Q 015366 93 VARFEKYLGEFRQWIEELEQ---LILL--DPD---------RNS-----SSHGSSLLQSLPQVISNVHIFFVHVAAKAES 153 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr---~L~s--~s~---------~~~-----S~itssaPQ~L~~aL~n~Hq~FVaLAArla~ 153 (408)
-..||.++...|+||+++.. .|.. ... ++. ..........|.+.+...+-.=+.|=.+++.
T Consensus 15 ~~~ye~~I~~LR~qid~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~ies 94 (119)
T 3ol1_A 15 GDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVES 94 (119)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHH
Confidence 45688888888888887664 1100 000 000 0000011334444555444455566677777
Q ss_pred HHHHHHHHHHHHHHHHh
Q 015366 154 IHQYVETMKTAYLADQR 170 (408)
Q Consensus 154 LHE~Ve~lKE~YL~~rR 170 (408)
|.+++.=+|..|=+..+
T Consensus 95 L~eEl~FLKk~heeEl~ 111 (119)
T 3ol1_A 95 LQEEIAFLKKLHEEEIQ 111 (119)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777777777655443
No 38
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=49.01 E-value=1.6e+02 Score=28.75 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRRG 173 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr~G 173 (408)
+..++++..+++.|+.+++.+........+.. .+.+ ..++.+..+......+++.|.+..+++++.|.+..++.|
T Consensus 294 ~~l~~d~~~L~~~l~~v~~~l~~~~~s~~~~~---~~~d--~f~~~~~~fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfg 368 (411)
T 1ux5_A 294 EQLVNDCKDFSQSIVNVERSVEIGNLSDSSKF---HPLD--KVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYG 368 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTTCTTSS---CTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCccccc---Cccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45667777788888888887754221001100 0221 244455555555567899999999999999999999877
Q ss_pred CC
Q 015366 174 DG 175 (408)
Q Consensus 174 D~ 175 (408)
..
T Consensus 369 ed 370 (411)
T 1ux5_A 369 ED 370 (411)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 39
>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B
Probab=48.86 E-value=56 Score=25.06 Aligned_cols=62 Identities=13% Similarity=0.102 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (408)
Q Consensus 100 L~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rR 170 (408)
+++-.+.|.+||+-+.-.. ....+|...++.|-+..-.+-..++...++|+...++-....+
T Consensus 5 i~eR~~ei~~ie~~i~eL~---------~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~kA~~ 66 (77)
T 1jth_B 5 IETRHSEIIKLENSIRELH---------DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK 66 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455566666554332 2357778888888888888888888888887777665555544
No 40
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=48.81 E-value=42 Score=32.18 Aligned_cols=26 Identities=19% Similarity=0.399 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 91 QTVARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 91 elV~~FEerL~~yRQqIEELEr~L~s 116 (408)
+++.+|+.++..+..||++.|..|..
T Consensus 131 ~~~~~f~~~~~~~~~Wl~e~e~~l~~ 156 (476)
T 1hci_A 131 HLAEKFRQKASTHETWAYGKEQILLQ 156 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45788999999999999999999964
No 41
>4i0x_A ESAT-6-like protein MAB_3112; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=48.80 E-value=57 Score=25.30 Aligned_cols=77 Identities=9% Similarity=-0.083 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (408)
Q Consensus 88 FF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~ 167 (408)
-+.....++.....+++..+++|+..+....+.= .+ .+-..-..++.+.++.+..|-.-|+.|.+.|...-+.|-+
T Consensus 4 el~~~a~~~~~~~~~i~~~l~~l~~~v~~l~~~W-~G---~Aa~af~~~~~~w~~~a~~l~~~L~~i~~~l~~aa~~y~~ 79 (94)
T 4i0x_A 4 EVGALSKFAASLADQMRAGSNSLDRDVQSLFGVW-KG---SAADAYRSGWDEMQDGATKVWNALTDIASTLGSNAAAFHA 79 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTC-CS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566788888888888888999988886553211 11 2345556677778888888877777777777776666654
Q ss_pred H
Q 015366 168 D 168 (408)
Q Consensus 168 ~ 168 (408)
.
T Consensus 80 ~ 80 (94)
T 4i0x_A 80 Q 80 (94)
T ss_dssp -
T ss_pred H
Confidence 4
No 42
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=48.76 E-value=92 Score=31.48 Aligned_cols=68 Identities=7% Similarity=0.028 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Q 015366 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQ------YVETMKTAYLADQ 169 (408)
Q Consensus 98 erL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE------~Ve~lKE~YL~~r 169 (408)
.++..+..||+|+|..|.+. .++.+.. +.++|-..-+.++.-..+.+.+|..|.+ +++.+.+.|-+++
T Consensus 9 r~v~dl~~Wl~E~~~~L~S~--d~GkDL~--sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~~~~~~~L~~~y~~L~ 82 (450)
T 3r6n_A 9 HVTSECLGWMRQQRAEMDMV--AWGVDLA--SVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLL 82 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTSC--CCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCcc--ccCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Confidence 45677889999999999654 3344321 2444444444455555566667777764 4677777776663
No 43
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=48.63 E-value=94 Score=24.79 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC
Q 015366 95 RFEKYLGEFRQWIEELEQLILLDP 118 (408)
Q Consensus 95 ~FEerL~~yRQqIEELEr~L~s~s 118 (408)
+||+-+..|++-||.+.+.+....
T Consensus 30 ~y~eAl~~Y~~Aie~l~~alk~e~ 53 (93)
T 1wfd_A 30 RYQQALVCYQEGIDMLLQVLKGTK 53 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCC
Confidence 799999999999999999987553
No 44
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=48.31 E-value=74 Score=28.16 Aligned_cols=68 Identities=18% Similarity=0.300 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPD-RNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~-~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE 163 (408)
+.++..+|+.++.....||++.|..|....- +.. +..+...+++...+=..|.++-..+..=++...+
T Consensus 12 Le~l~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~d-------l~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~ 80 (250)
T 1quu_A 12 LEHLAEKFRQKASTHETWAYGKEQILLQKDYESAS-------LTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQE 80 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTHHHHHHCCCCSSCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCCCCCCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 45
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=48.30 E-value=43 Score=35.03 Aligned_cols=28 Identities=11% Similarity=0.324 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 90 QQTVARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 90 ~elV~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
.+++.+|+.++.++..||++.|..|...
T Consensus 369 e~l~~~F~~~~~~~~~Wl~~~e~~l~~~ 396 (863)
T 1sjj_A 369 DHLAEKFRQKASIHESWTDGKEAMLQQK 396 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3567889999999999999999999754
No 46
>2bbh_A Divalent cation transport-related protein; transporter, Mg, membrane, structural genomics, structural G consortium, SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP: d.328.1.1
Probab=48.19 E-value=1e+02 Score=27.58 Aligned_cols=28 Identities=21% Similarity=0.261 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s 116 (408)
+..+|++|..-+..+..+||+||..+..
T Consensus 177 ld~ivd~y~~~l~~i~~~id~lE~~v~~ 204 (269)
T 2bbh_A 177 IDALVDDYFVLLEKIDDEIDVLEEEVLE 204 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4578899999999999999999999854
No 47
>1sfc_B Protein (syntaxin 1A), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1l4a_B
Probab=47.74 E-value=67 Score=25.10 Aligned_cols=63 Identities=13% Similarity=0.091 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRR 171 (408)
Q Consensus 100 L~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr 171 (408)
+++-.+.|.+||+-+.-.. ....+|...++.+-+..-.+-..++...++|+...+.-....++
T Consensus 16 i~eR~~ei~~ie~~i~eL~---------~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~kA~~~ 78 (83)
T 1sfc_B 16 IETRHSEIIKLENSIRELH---------DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKY 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455666666554332 23667788888888888888778888888877776665555543
No 48
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=47.62 E-value=90 Score=26.45 Aligned_cols=25 Identities=12% Similarity=0.049 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+.+|+.++.+...||.+-|..|...
T Consensus 109 l~~F~~~~~~~~~Wl~~~E~~l~~~ 133 (214)
T 1s35_A 109 FQEFQKDAKQAEAILSNQEYTLAHL 133 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4567777777778888888888643
No 49
>3ts9_A Interferon-induced helicase C domain-containing P; helix bundle, fancm helicase, super family 2 helicase, SF2 H DEXD/H helicase; 2.00A {Mus musculus}
Probab=47.42 E-value=42 Score=29.69 Aligned_cols=74 Identities=12% Similarity=0.198 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCC
Q 015366 101 GEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRR-----GDG 175 (408)
Q Consensus 101 ~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr~-----GD~ 175 (408)
|.|+|||-++|+.-....++. ...-...|++-|+..+== ...+..+.+.-|++-|-+.+... +|.
T Consensus 36 Q~YEQwvV~~ek~aa~~~~r~--------~rvcAeHLRkYNdAL~In--dtiRm~DAl~~L~~Fy~~e~~~k~~~~~~~~ 105 (138)
T 3ts9_A 36 QHYEQWAIQMEKKAAKDGNRK--------DRVCAEHLRKYNEALQIN--DTIRMIDAYSHLETFYTDEKEKKFAVLNDSK 105 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTCHH--------HHHHHHHHHHHHHHHHHH--HHSCHHHHHHHHHHHHHHHHHHHHHCCC---
T ss_pred hHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHhhHHHHhc--cHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 678899999999876543211 112245555555555422 34455677888888888876642 222
Q ss_pred CCc-chhhhH
Q 015366 176 SDP-FLEADR 184 (408)
Q Consensus 176 ~DP-FaEAdR 184 (408)
..+ |.+.+|
T Consensus 106 ~~~~~d~ter 115 (138)
T 3ts9_A 106 KSLKLDETDE 115 (138)
T ss_dssp -CCSCCHHHH
T ss_pred cccccChHHH
Confidence 222 667766
No 50
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=47.03 E-value=1.1e+02 Score=24.41 Aligned_cols=25 Identities=20% Similarity=0.240 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+.+..++...++.+|+++++.+...
T Consensus 19 l~~L~~~~~~l~~~i~~l~~~l~~l 43 (112)
T 1l8d_A 19 RNEITQRIGELKNKIGDLKTAIEEL 43 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445556666777777777766443
No 51
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=47.00 E-value=24 Score=27.92 Aligned_cols=79 Identities=11% Similarity=0.060 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 87 AFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRN-SSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAY 165 (408)
Q Consensus 87 pFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~-~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~Y 165 (408)
.-+..++.++.....+++..+++|+..+..+.... =. + .+-+.-.....+.++.+-.|-.-|+.|.+.|....+.|
T Consensus 14 ~~l~~~a~~~~~~~~~i~~~l~~L~~~v~~L~~~g~W~--G-~A~~ay~~~~~~W~~~a~~l~~~L~~i~~~l~~a~~~y 90 (103)
T 4i0x_B 14 DHIEQVTSRARGFKEFVTENLDQLESRAQKLVQSGQWA--G-AAAAAYSQAHKEWMDAARELVEGLSQMEEAARTAHGAY 90 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCee--c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44677788888888888888888888885443210 01 1 12344455566666666666666666666666666655
Q ss_pred HHH
Q 015366 166 LAD 168 (408)
Q Consensus 166 L~~ 168 (408)
-+.
T Consensus 91 ~~~ 93 (103)
T 4i0x_B 91 SEA 93 (103)
T ss_dssp ---
T ss_pred HHH
Confidence 544
No 52
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=46.73 E-value=1e+02 Score=27.04 Aligned_cols=71 Identities=13% Similarity=0.174 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHH---HH---------------HHH
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAA---KA---------------ESI 154 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAA---rl---------------a~L 154 (408)
..+|.+.+..+..||++.|..|.... .+.. +..+...+++...+=-.|++ +| ..|
T Consensus 22 a~~~~~~~~~l~~Wl~e~e~~l~s~d--~g~D-----l~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~~~~~~i 94 (224)
T 2iak_A 22 EEVNMKFVQDLLNWVDEMQVQLDRTE--WGSD-----LPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSY 94 (224)
T ss_dssp HHHHC-CHHHHHHHHHHHHHHHHTCC--CCSS-----HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc--cCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 45555668889999999999997542 2221 33444444443332222322 22 345
Q ss_pred HHHHHHHHHHHHHHHh
Q 015366 155 HQYVETMKTAYLADQR 170 (408)
Q Consensus 155 HE~Ve~lKE~YL~~rR 170 (408)
.++++.+.+.|-++++
T Consensus 95 ~~~~~~l~~~~~~L~~ 110 (224)
T 2iak_A 95 TDKLHRLESQYAKLLN 110 (224)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5666777777766533
No 53
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=45.95 E-value=52 Score=31.41 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=27.0
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQLI 114 (408)
Q Consensus 84 ~PSpFF~elV~~FEerL~~yRQqIEELEr~L 114 (408)
.=||.|..+|..||+++...+++|+.|-+..
T Consensus 14 ~DSP~FR~~l~~~E~~~~~l~~~l~kl~k~~ 44 (385)
T 2q13_A 14 EDSPQTRSLLGVFEEDATAISNYMNQLYQAM 44 (385)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999998877654
No 54
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A
Probab=45.57 E-value=1.6e+02 Score=26.26 Aligned_cols=28 Identities=18% Similarity=0.243 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s 116 (408)
+..+|++|...+..+..+|++||..+..
T Consensus 153 ld~ivd~y~~~l~~l~~~id~lE~~l~~ 180 (264)
T 3nvo_A 153 CDALTDHASEFIEELHDKIIDLEDNLLD 180 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4668899999999999999999998853
No 55
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=45.20 E-value=1.2e+02 Score=31.62 Aligned_cols=43 Identities=9% Similarity=0.147 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHH
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHI 142 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq 142 (408)
..+|.+++.....||++.|..|.... .+. .+.++...+++..+
T Consensus 487 ~~~f~~~a~~~~~Wl~~~e~~l~~~~--~g~-----dl~~ve~ll~kh~~ 529 (863)
T 1sjj_A 487 YLEYAKRAAPFNNWMEGAMEDLQDTF--IVH-----TIEEIQGLTTAHEQ 529 (863)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHHHCCC--CCS-----SSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchH--hhc-----cHHHHHHHHHHHHH
Confidence 33566666667789999999887542 121 24555555554443
No 56
>3b5n_B Protein SSO1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=44.74 E-value=83 Score=23.72 Aligned_cols=62 Identities=11% Similarity=0.012 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (408)
Q Consensus 100 L~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rR 170 (408)
+++-.+.|.+||+-+.-.. ....+|...+..+-+..-.+-..++...++|+...+.-....+
T Consensus 5 i~eR~~ei~~ie~~i~eL~---------~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~kA~~ 66 (69)
T 3b5n_B 5 VQARHQELLKLEKSMAELT---------QLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKAVK 66 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555554331 2356777788888888777777777777777777665544433
No 57
>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A
Probab=44.71 E-value=1.5e+02 Score=25.47 Aligned_cols=72 Identities=11% Similarity=0.152 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its--saPQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-..||+...+.+..+++| ||.+........+ .+.. ...-+....|+++-+.+..+...+..+.+.
T Consensus 53 F~~lH~~~ee~~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~ 132 (164)
T 4eve_A 53 FFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNT 132 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566899999999999999998 6665544322221 0000 011245566666666666665555555554
Q ss_pred HHH
Q 015366 158 VET 160 (408)
Q Consensus 158 Ve~ 160 (408)
.++
T Consensus 133 aee 135 (164)
T 4eve_A 133 AEK 135 (164)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 58
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=44.34 E-value=1.4e+02 Score=24.94 Aligned_cols=68 Identities=9% Similarity=0.119 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~ 168 (408)
+.+.|.+.+..+...+.+..-||..|.-.. +.....+...+.....|=+.++.+.+.++.+...|-.+
T Consensus 41 lrr~iq~L~~el~~l~~~~~~LE~~l~e~e------------~~~~~~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~L 108 (129)
T 3tnu_B 41 MNRMIQRLRAEIDNVKKQCANLQNAIADAE------------QRGELALKDARNKLAELEEALQKAKQDMARLLREYQEL 108 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 456677777777777777777777774221 12234566666666677777777777777777777544
No 59
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=44.33 E-value=15 Score=30.18 Aligned_cols=78 Identities=10% Similarity=0.181 Sum_probs=51.9
Q ss_pred CccchhhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HhhcCCCCCCCCCCcccccchHHHHH
Q 015366 70 SVVPVFDFYRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQ-----------LILLDPDRNSSSHGSSLLQSLPQVIS 138 (408)
Q Consensus 70 ~~~Pv~Dfys~~p~~PSpFF~elV~~FEerL~~yRQqIEELEr-----------~L~s~s~~~~S~itssaPQ~L~~aL~ 138 (408)
.++| .+||..+ -.=|.+-+..|.+.+++..+.+.-+++ .|+.. + .+.-.|+..|.
T Consensus 3 ~~~P-~~yF~~l----v~~fe~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~------h---~~FiaLAa~l~ 68 (93)
T 3t98_B 3 HMAP-ADYFRVL----VQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKI------Y---QTFVALAAQLQ 68 (93)
T ss_dssp --CH-HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHH------H---HHHHHHHHHHH
T ss_pred CCch-HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHH------H---HHHHHHHHHHH
Confidence 4567 7898877 445666677788888877776655554 22111 1 14788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 139 NVHIFFVHVAAKAESIHQYVETMKT 163 (408)
Q Consensus 139 n~Hq~FVaLAArla~LHE~Ve~lKE 163 (408)
.+|+..-.+ |-++++.+-.-+|+
T Consensus 69 ~lH~~V~~~--Ke~Yl~~rr~~~~d 91 (93)
T 3t98_B 69 SIHENVKVL--KEQYLSYRKMFLGD 91 (93)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHTC-
T ss_pred HHHHHHHHH--HHHHHHHHHHHhcc
Confidence 999988888 77777766554443
No 60
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=44.07 E-value=93 Score=26.19 Aligned_cols=24 Identities=25% Similarity=0.374 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 93 VARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s 116 (408)
+.+|+.++.....||.+.|..+..
T Consensus 108 ~~~f~~~~~e~~~Wl~~~e~~l~~ 131 (213)
T 1cun_A 108 YQQFVANVEEEEAWINEKMTLVAS 131 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 356788888888899999988753
No 61
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=43.99 E-value=79 Score=31.87 Aligned_cols=74 Identities=11% Similarity=0.205 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRRG 173 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr~G 173 (408)
+..++++..+++.++.+++.+......... +.| ...+.+.++......+++.|.+..+++++.|.+..++.|
T Consensus 295 ~~l~~~~~~L~~~l~~v~~~l~~~~~~~~~------~~d--~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFG 366 (483)
T 2j1d_G 295 TELDKEISTLRSGLKAVETELEYQKSQPPQ------PGD--KFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFG 366 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCCC------TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCC------chh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 455667777777777777777543110000 122 123445555556777899999999999999999999877
Q ss_pred CC
Q 015366 174 DG 175 (408)
Q Consensus 174 D~ 175 (408)
..
T Consensus 367 Ed 368 (483)
T 2j1d_G 367 EE 368 (483)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 62
>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*
Probab=43.70 E-value=1.5e+02 Score=25.10 Aligned_cols=71 Identities=7% Similarity=0.065 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its--saPQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-..||+...+.+..++++ ||.+...+....+ .+.. ....+....|+.+-+.+..+...+..+.+.
T Consensus 48 f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ 127 (162)
T 1o9r_A 48 FIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTKLKAYPTDIYKIHDHLDALIERYGEVANMIRKAIDD 127 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567899999999999999988 5555544332221 0000 001245556666655555555555444443
Q ss_pred HH
Q 015366 158 VE 159 (408)
Q Consensus 158 Ve 159 (408)
.+
T Consensus 128 a~ 129 (162)
T 1o9r_A 128 SD 129 (162)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 63
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=43.70 E-value=60 Score=29.33 Aligned_cols=22 Identities=14% Similarity=0.172 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 015366 93 VARFEKYLGEFRQWIEELEQLI 114 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L 114 (408)
+.+|..++.+...||++.|..|
T Consensus 115 ~~~f~~~~~e~~~Wl~~k~~~l 136 (323)
T 3edv_A 115 LHKFYHDAKEIFGRIQDKHKKL 136 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 4578888888888999988877
No 64
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=43.69 E-value=25 Score=39.11 Aligned_cols=28 Identities=7% Similarity=0.297 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 90 QQTVARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 90 ~elV~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
.+++.+|..+...+..||+|.|+.|...
T Consensus 885 ~~L~qkF~rka~~~e~Wl~ek~~~l~s~ 912 (1010)
T 1g8x_A 885 AVLLQKYNRILKKLENWATTKSVYLGSN 912 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3578999999999999999999999754
No 65
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=42.56 E-value=1.2e+02 Score=23.80 Aligned_cols=30 Identities=20% Similarity=0.314 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 86 SAFLQQTVARFEKYLGEFRQWIEELEQLIL 115 (408)
Q Consensus 86 SpFF~elV~~FEerL~~yRQqIEELEr~L~ 115 (408)
|==.++=++..|++|..+.+.|++||..|.
T Consensus 17 SykeqrEle~le~~Ie~LE~~i~~le~~la 46 (89)
T 2lw1_A 17 SYKLQRELEQLPQLLEDLEAKLEALQTQVA 46 (89)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333566789999999999999999999996
No 66
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=42.53 E-value=74 Score=32.80 Aligned_cols=14 Identities=14% Similarity=0.100 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHh
Q 015366 6 AQLQERMAVVKDML 19 (408)
Q Consensus 6 ~~lqeL~~~V~~ml 19 (408)
..|++|++.|.++-
T Consensus 100 ~~LqeLe~~l~~ls 113 (464)
T 1m1j_B 100 PVLRDLKDRVAKFS 113 (464)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHh
Confidence 45677776665553
No 67
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=42.12 E-value=1e+02 Score=24.46 Aligned_cols=57 Identities=19% Similarity=0.288 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE 163 (408)
..+|++-+..|++-||.+-..+....+ +..-...-+++.+|. .|++.|.+.|...|+
T Consensus 29 ~g~y~eAl~lY~~Aie~ll~alk~e~d----------~~~k~~lr~K~~eYl----~RAE~LK~~l~~~k~ 85 (86)
T 4a5x_A 29 ESRYPQALVCYQEGIDLLLQVLKGTKD----------NTKRCNLREKISKYM----DRAENIKKYLDQEKE 85 (86)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTCCC----------HHHHHHHHHHHHHHH----HHHHHHHHHHHHC--
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhhCCC----------HHHHHHHHHHHHHHH----HHHHHHHHHHHhhhc
Confidence 346899999999999999888865432 221122233334433 456777777766664
No 68
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=41.58 E-value=1.6e+02 Score=24.74 Aligned_cols=68 Identities=13% Similarity=0.086 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~ 168 (408)
+.+.|.+.+.+++..+.+..-||..|.-.. +.....+...+.....+=+.++.+.+.++.+...|-.+
T Consensus 43 lrr~iq~L~~el~~l~~~~~sLE~~l~e~e------------~~~~~~l~~~q~~i~~lE~eL~~~r~em~~ql~EYq~L 110 (131)
T 3tnu_A 43 LRRTMQNLEIELQSQLSMKASLENSLEETK------------GRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKIL 110 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566788888888888888888888775321 22244566666666677777777777777777777554
No 69
>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1
Probab=41.53 E-value=1.6e+02 Score=24.82 Aligned_cols=71 Identities=13% Similarity=0.181 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its--saPQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-..||+...+.+..++++ ||.+...+....+ .+.. ....+....|+.+-+.+..+...+..+.+.
T Consensus 44 f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ 123 (156)
T 2fjc_A 44 FKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKEITIVSALARVKRDFEYLSTRFSQTQVL 123 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667899999999999999988 6666544332221 0000 001345556665555555555544444444
Q ss_pred HH
Q 015366 158 VE 159 (408)
Q Consensus 158 Ve 159 (408)
.+
T Consensus 124 a~ 125 (156)
T 2fjc_A 124 AA 125 (156)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 70
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=41.12 E-value=2e+02 Score=25.86 Aligned_cols=24 Identities=21% Similarity=0.441 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 92 TVARFEKYLGEFRQWIEELEQLIL 115 (408)
Q Consensus 92 lV~~FEerL~~yRQqIEELEr~L~ 115 (408)
-+.+|...+..+..||++.|..+.
T Consensus 7 ~l~~f~~~~~~l~~Wl~~~e~~l~ 30 (323)
T 3edv_A 7 RLFQLNREVDDLEQWIAEREVVAG 30 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 367899999999999999999885
No 71
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=41.08 E-value=32 Score=23.99 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 133 LPQVISNVHIFFVHVAAKAESIHQYVETMK 162 (408)
Q Consensus 133 L~~aL~n~Hq~FVaLAArla~LHE~Ve~lK 162 (408)
|...+..+.+.|+-|-=++..|.|+|..+|
T Consensus 6 lkekvsalkeqflmlmfkvsalkekvsalk 35 (36)
T 3tq2_A 6 LKEKVSALKEQFLMLMFKVSALKEKVSALK 35 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344455555555555555555555555444
No 72
>1n7s_B Syntaxin 1A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_B 3rk3_B 3rl0_B 1kil_B
Probab=41.06 E-value=70 Score=24.02 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (408)
Q Consensus 100 L~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~ 164 (408)
+++-.+.|.+||+-+.-.. ...++|...+..|-+..-.+-..++...++|+...+.
T Consensus 7 i~eR~~ei~~Ie~~i~eL~---------~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~ 62 (68)
T 1n7s_B 7 IETRHSEIIKLENSIRELH---------DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSD 62 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555554331 2356677777777777777777777777766665544
No 73
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=40.65 E-value=76 Score=26.87 Aligned_cols=51 Identities=14% Similarity=0.122 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHH
Q 015366 92 TVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKA 151 (408)
Q Consensus 92 lV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArl 151 (408)
+-.-|.+...++++.+++|+..+...++ . |..-....-.+|+.++.|.+-+
T Consensus 42 lk~~f~~~a~~~~~~~~eL~~~i~~lGg-~--------p~~~~s~~g~~hr~~~~lks~~ 92 (153)
T 4etr_A 42 LKAAMLEQSRDCAAAADELERIVLELGG-K--------PKDSTSFAGDLHRRWVDLKSLV 92 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC-C--------C---------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------CCCCCcHHHHHHHHHHHHHHHh
Confidence 3667889999999999999999987653 1 3333556777888888776554
No 74
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=40.53 E-value=1.2e+02 Score=23.27 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (408)
Q Consensus 98 erL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~ 164 (408)
+|.......+++|-.+|....+ . =.+=..+|..--+|.-+|-.+++.|.++++++|.+
T Consensus 22 ~RR~~in~~f~~Lr~lvP~~~~--~-------k~sK~~iL~~Ai~YI~~L~~~~~~L~~e~~~L~~~ 79 (80)
T 1hlo_A 22 KRRDHIKDSFHSLRDSVPSLQG--E-------KASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQ 79 (80)
T ss_dssp HHHHHHHHHHHHHHHHSGGGTT--S-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCCCC--C-------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4677788899999999986532 1 12446788888899999988899998888888764
No 75
>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A*
Probab=40.52 E-value=69 Score=28.47 Aligned_cols=25 Identities=12% Similarity=0.318 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQL 113 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~ 113 (408)
+..+|++|...|..+...||+||..
T Consensus 142 ld~ivd~y~~~l~~l~~~id~lE~~ 166 (252)
T 3ck6_A 142 IEGLNGKIDLYLDTIEETLNEFDVN 166 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4566778888888888888888865
No 76
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=39.71 E-value=1.2e+02 Score=23.67 Aligned_cols=78 Identities=8% Similarity=0.028 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIF-------FVHVAAKAESIHQYVETMKTAY 165 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~-------FVaLAArla~LHE~Ve~lKE~Y 165 (408)
.+.++.-...++....+|+..|. +|...+..+... ..+-...-++.++.+++|++..
T Consensus 13 ~~~l~~~a~~~~~~~~~i~~~l~----------------~L~~~v~~L~~~g~W~G~A~~ay~~~~~~W~~~a~~l~~~L 76 (103)
T 4i0x_B 13 LDHIEQVTSRARGFKEFVTENLD----------------QLESRAQKLVQSGQWAGAAAAAYSQAHKEWMDAARELVEGL 76 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHhcCCCeechHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666666666666663 233444444433 3333344566666677777777
Q ss_pred HHHHhhcCCCCCcchhhhHHH
Q 015366 166 LADQRRRGDGSDPFLEADRRE 186 (408)
Q Consensus 166 L~~rRr~GD~~DPFaEAdRrE 186 (408)
-...+...+..+=+.+.|++.
T Consensus 77 ~~i~~~l~~a~~~y~~~e~~~ 97 (103)
T 4i0x_B 77 SQMEEAARTAHGAYSEAQEAN 97 (103)
T ss_dssp HHHHHHHHHHHTCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 666665555555555554443
No 77
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A
Probab=39.29 E-value=1.7e+02 Score=26.10 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHhhc
Q 015366 100 LGEFRQWIEELEQLILL 116 (408)
Q Consensus 100 L~~yRQqIEELEr~L~s 116 (408)
+..|-.-++++|..+-.
T Consensus 157 vd~y~~~l~~l~~~id~ 173 (264)
T 3nvo_A 157 TDHASEFIEELHDKIID 173 (264)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44455566666666643
No 78
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=38.87 E-value=1.6e+02 Score=27.67 Aligned_cols=73 Identities=11% Similarity=0.102 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 87 AFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (408)
Q Consensus 87 pFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~ 164 (408)
+|-.+-+.++++.+..++.-++.|++..... ..+.. ....++...+..+.+-...+..+++.|.++++++++.
T Consensus 56 ~~~~~~~~~~~~~~~k~~~~~~~L~~~~~~~----~~~~~-~~~~~~e~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~ 128 (357)
T 3rrk_A 56 PTEEAELKRWEAVVSQAEQSLTVVGLATVPS----SKPFT-GSLEEAEAVLRPVASRAEVLGKERAALEEEIQTIELF 128 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC----SSCCC-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHhHHHHHHHHHHHHHHHhccccccc----ccCCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3444557788888888887777777543211 01110 1134455556666666666666666666666666555
No 79
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=38.42 E-value=65 Score=26.42 Aligned_cols=28 Identities=11% Similarity=0.141 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 134 PQVISNVHIFFVHVAAKAESIHQYVETM 161 (408)
Q Consensus 134 ~~aL~n~Hq~FVaLAArla~LHE~Ve~l 161 (408)
-..|+..++-.-.||..++++-+-|+++
T Consensus 54 i~~Lk~en~~L~elA~~~q~la~~i~~L 81 (83)
T 1wlq_A 54 IARLRKENKDLAEVAEHVQYMAEVIERL 81 (83)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4456666777777777777777666654
No 80
>2hn1_A CORA, magnesium and cobalt transporter; integral membrane protein fragment, metal transporter protei divalent cations, metal transport; 2.90A {Archaeoglobus fulgidus}
Probab=38.16 E-value=95 Score=27.86 Aligned_cols=29 Identities=24% Similarity=0.235 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+..+|++|..-+..+..+||+||..+...
T Consensus 178 ld~ivd~y~~~l~~i~~~id~lE~~l~~~ 206 (266)
T 2hn1_A 178 LDAVVDSYFEALLKISDEIEVLEDEVVSG 206 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45789999999999999999999998643
No 81
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=37.01 E-value=28 Score=33.67 Aligned_cols=40 Identities=10% Similarity=0.013 Sum_probs=10.7
Q ss_pred cchHHHHHHHHHHHHHH---------HHHHHHH--HHHHHHHHHHHHHHHh
Q 015366 131 QSLPQVISNVHIFFVHV---------AAKAESI--HQYVETMKTAYLADQR 170 (408)
Q Consensus 131 Q~L~~aL~n~Hq~FVaL---------AArla~L--HE~Ve~lKE~YL~~rR 170 (408)
++.-..|+++++.++.. .+.-..+ -|+|...=|+||+.|.
T Consensus 256 ~~~V~~LE~~~D~~~~~~~~~~~~~~~~~~~~~ps~d~i~~efE~fL~~~~ 306 (319)
T 2p90_A 256 QRVVGALEQQYDSELERYRNRHPQAVMPGESELPSGDEIGAEFEKFLADLD 306 (319)
T ss_dssp HHHHHHHHHHHHHHHHHCC--------------------------------
T ss_pred HHHHHHHHhhhhhhhhhhcccccccccccccCCCCHHHHHHHHHHHHHhcC
Confidence 34446778888887631 1111222 4566777788887654
No 82
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=36.86 E-value=78 Score=31.40 Aligned_cols=39 Identities=8% Similarity=0.163 Sum_probs=25.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 130 LQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (408)
Q Consensus 130 PQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~ 168 (408)
...|...+.++.+-...+-.+++.+.++++++++.|.+.
T Consensus 5 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 43 (403)
T 4etp_A 5 IAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKE 43 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666666666666666666777777766665
No 83
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=36.82 E-value=42 Score=24.32 Aligned_cols=24 Identities=21% Similarity=0.288 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 92 TVARFEKYLGEFRQWIEELEQLIL 115 (408)
Q Consensus 92 lV~~FEerL~~yRQqIEELEr~L~ 115 (408)
.++..|+++..++++|++|+..|.
T Consensus 45 ~~~~L~~ri~~Le~~l~~l~~~l~ 68 (70)
T 1zme_C 45 YLQQLQKDLNDKTEENNRLKALLL 68 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 377888999999999998888764
No 84
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=36.64 E-value=53 Score=25.44 Aligned_cols=31 Identities=10% Similarity=0.157 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 015366 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDP 118 (408)
Q Consensus 88 FF~elV~~FEerL~~yRQqIEELEr~L~s~s 118 (408)
++++-+.++++++...++++++|++.|....
T Consensus 51 ~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~ 81 (83)
T 1nkp_B 51 YMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5677788999999999999999999997653
No 85
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=36.58 E-value=1.2e+02 Score=27.20 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 93 VARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s 116 (408)
+.+|..++.++..||++.|..|..
T Consensus 6 ~qqf~~~~~el~~Wl~e~~~~l~~ 29 (326)
T 3kbt_A 6 AQQYYLDADEAEAWIGEQELYVIS 29 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 678999999999999999998864
No 86
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.42 E-value=1.1e+02 Score=26.20 Aligned_cols=23 Identities=22% Similarity=0.186 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCC
Q 015366 97 EKYLGEFRQWIEELEQLILLDPD 119 (408)
Q Consensus 97 EerL~~yRQqIEELEr~L~s~s~ 119 (408)
++-|+.||+.|++||+-|.....
T Consensus 39 ~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 39 EEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHHHhcccccc
Confidence 46688999999999999987654
No 87
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=36.13 E-value=45 Score=24.50 Aligned_cols=26 Identities=15% Similarity=0.332 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLI 114 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L 114 (408)
|-+++..|+.-=+..+|.|+.||+.+
T Consensus 21 ~ArLlae~~ssq~KlKqRit~lE~~v 46 (46)
T 3swy_A 21 FARLLAEYNATQMKMKQRLSQLESQV 46 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 56778888888888888999998764
No 88
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=35.83 E-value=80 Score=29.70 Aligned_cols=78 Identities=19% Similarity=0.159 Sum_probs=37.1
Q ss_pred hhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHH
Q 015366 75 FDFYRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESI 154 (408)
Q Consensus 75 ~Dfys~~p~~PSpFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~L 154 (408)
.|-+.. ..|++.||++|+ |+|=..+...++|=|++-.... ..++--..|+..++-.-.||..+++|
T Consensus 86 eDL~~~--e~Pse~YWk~lA--E~RR~AL~eaLeEN~~Lh~~ie----------~l~eEi~~LkeEn~eLkeLae~~q~l 151 (209)
T 2wvr_A 86 FDLMIK--ENPSSQYWKEVA--EKRRKALYEALKENEKLHKEIE----------QKDNEIARLKKENKELAEVAEHVQYM 151 (209)
T ss_dssp -----C--CSCCTTHHHHHH--HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhc--CCCcHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455553 347777777765 3333333333444333222110 13334456666677777777777777
Q ss_pred HHHHHHHHHHHH
Q 015366 155 HQYVETMKTAYL 166 (408)
Q Consensus 155 HE~Ve~lKE~YL 166 (408)
-+-|+++...-+
T Consensus 152 a~vi~~l~~~~~ 163 (209)
T 2wvr_A 152 AELIERLNGEPL 163 (209)
T ss_dssp HHHHHHHHC---
T ss_pred HHHHHHHhcCCc
Confidence 666666654433
No 89
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=35.74 E-value=26 Score=24.40 Aligned_cols=21 Identities=19% Similarity=0.283 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 015366 150 KAESIHQYVETMKTAYLADQR 170 (408)
Q Consensus 150 rla~LHE~Ve~lKE~YL~~rR 170 (408)
++..|.|+|..+||+||-++-
T Consensus 2 kvsalkekvsalkeqflmlmf 22 (36)
T 3tq2_A 2 KVSALKEKVSALKEQFLMLMF 22 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 577899999999999998754
No 90
>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}
Probab=35.56 E-value=2.4e+02 Score=25.23 Aligned_cols=72 Identities=10% Similarity=0.176 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--cccc-chHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQ-SLPQVISNVHIFFVHVAAKAESIHQ 156 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its--saPQ-~L~~aL~n~Hq~FVaLAArla~LHE 156 (408)
|..+-..||+...+.+..+++| ||.+...+..+.+ .+.. ...- +....|+.+-+.+..+...+..+.+
T Consensus 74 F~~LH~~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~~emL~~ll~~e~~~i~~~re~i~ 153 (199)
T 2xgw_A 74 FLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGLD 153 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567899999999999999988 6666544332221 0000 0011 4556666666555555555555544
Q ss_pred HHHH
Q 015366 157 YVET 160 (408)
Q Consensus 157 ~Ve~ 160 (408)
..++
T Consensus 154 ~aee 157 (199)
T 2xgw_A 154 ITDE 157 (199)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 91
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=35.55 E-value=74 Score=23.76 Aligned_cols=73 Identities=11% Similarity=0.065 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (408)
Q Consensus 88 FF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~ 164 (408)
-|.....+++..+...++.|+.|...-.-... .. .. ..-+.+...+.++.+.+..++..|...++..++.-+.
T Consensus 17 ~~~~~~~~l~~~l~~L~~~~~~L~~~W~G~a~--~a-f~-~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~y~~~d~~ 89 (97)
T 2vs0_A 17 SYGQGSDQIRQILSDLTRAQGEIAANWEGQAF--SR-FE-EQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQ 89 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCSSTT--HH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH--HH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777788888888888777765432211 11 10 1245666777777777777777777777776655443
No 92
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=35.02 E-value=2.7e+02 Score=27.44 Aligned_cols=31 Identities=0% Similarity=-0.037 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 140 VHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (408)
Q Consensus 140 ~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rR 170 (408)
..+-...+-.++..+..+++++|+...+.++
T Consensus 535 ~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~ 565 (597)
T 3oja_B 535 KQKETEDLEQENIALEKQLDNKRAKQAELRQ 565 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcchhhHHhhhHHHHHHHhhhhhHHHHHHH
Confidence 3333344444555555555555555555544
No 93
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=35.00 E-value=71 Score=32.48 Aligned_cols=24 Identities=4% Similarity=0.252 Sum_probs=11.2
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFE----KYLGEFRQWIEELEQ 112 (408)
Q Consensus 89 F~elV~~FE----erL~~yRQqIEELEr 112 (408)
|+.++++-| .++..+++.++++.+
T Consensus 54 Lqg~Ldk~er~~~~rIe~L~~~L~~~s~ 81 (390)
T 1deq_A 54 MKGLIDEVDQDFTSRINKLRDSLFNYQK 81 (390)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 444555444 444444444444433
No 94
>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0
Probab=34.86 E-value=2e+02 Score=24.07 Aligned_cols=72 Identities=13% Similarity=0.084 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its--saPQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-..||+...+.+..++++ ||.+...+....+ .+.. ....+....|+++-+.+..+...+..+.+.
T Consensus 36 F~~lH~~~ee~~~~~~~~~D~iAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ 115 (152)
T 3kwo_A 36 FFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEA 115 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCCSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566889999999999999998 6665544322221 1100 011355666666666666665555555554
Q ss_pred HHH
Q 015366 158 VET 160 (408)
Q Consensus 158 Ve~ 160 (408)
.++
T Consensus 116 a~~ 118 (152)
T 3kwo_A 116 AEK 118 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 95
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=34.19 E-value=2.3e+02 Score=27.07 Aligned_cols=23 Identities=17% Similarity=0.306 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 015366 94 ARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~s 116 (408)
..|...+..+..||.+.|..|..
T Consensus 370 ~~F~~~a~~~~~Wl~e~e~~l~~ 392 (476)
T 1hci_A 370 RQFAAQANAIGPWIQNKMEEIAR 392 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 46777888888899999999874
No 96
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=34.14 E-value=1.4e+02 Score=22.61 Aligned_cols=70 Identities=9% Similarity=0.054 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMK 162 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lK 162 (408)
|.+..+++++.+..+++.|+.|...-.-.+ ... +. ...+.+...+.++.+.+..++..|..+.+..++.-
T Consensus 20 ~~~~~~~i~~~l~~L~~~~~~l~~~W~G~a--~~a-F~-~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~~D 89 (98)
T 3gwk_C 20 YTAGSQQVTEVLNLLTQEQAVIDENWDGST--FDS-FE-AQFNELSPKITEFAQLLEDINQQLLKVADIIEQTD 89 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHBCSST--THH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCcHH--HHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566677777777777777665543221 111 10 12445555666666666666666665555555443
No 97
>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}
Probab=33.90 E-value=2.2e+02 Score=24.20 Aligned_cols=72 Identities=11% Similarity=0.139 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCccc--ccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGSSL--LQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~itssa--PQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-..||+...+.+..+++| ||.+...+..+.+ .+.... ..+....|+.+-+.+..+...+..+.+.
T Consensus 49 f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ 128 (161)
T 2z90_A 49 FRDLHLQLDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTTLPEFPAFERSTADVVDLITTRINATVDTIRRVHDA 128 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566889999999999999988 6666544332221 121100 1456677777777777666666666555
Q ss_pred HHH
Q 015366 158 VET 160 (408)
Q Consensus 158 Ve~ 160 (408)
.++
T Consensus 129 a~~ 131 (161)
T 2z90_A 129 VDA 131 (161)
T ss_dssp HHH
T ss_pred hcC
Confidence 444
No 98
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=33.64 E-value=83 Score=30.87 Aligned_cols=15 Identities=7% Similarity=0.140 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHH
Q 015366 148 AAKAESIHQYVETMK 162 (408)
Q Consensus 148 AArla~LHE~Ve~lK 162 (408)
..+++.|.++|.+++
T Consensus 39 ~~~i~~l~~~i~~l~ 53 (323)
T 1lwu_C 39 QQFVTRLQQQLVDIR 53 (323)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444443
No 99
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=33.17 E-value=72 Score=25.43 Aligned_cols=24 Identities=25% Similarity=0.533 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 90 QQTVARFEKYLGEFRQWIEELEQL 113 (408)
Q Consensus 90 ~elV~~FEerL~~yRQqIEELEr~ 113 (408)
.....+++.++..+++.+++++..
T Consensus 23 ~~~~~~l~~~i~~l~~~l~~l~~~ 46 (112)
T 1l8d_A 23 TQRIGELKNKIGDLKTAIEELKKA 46 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcC
Confidence 455778888999999999888773
No 100
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=33.05 E-value=2.4e+02 Score=24.47 Aligned_cols=70 Identities=14% Similarity=0.157 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHH
Q 015366 97 EKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAES---------------IHQYVETM 161 (408)
Q Consensus 97 EerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~---------------LHE~Ve~l 161 (408)
..++..+..||+|.++.|.+.. .+... .+.+.+-..-+.++.-+.+-..+|.. |.++++.+
T Consensus 11 ~r~~~dl~~Wl~e~~~~l~s~d--~G~Dl--~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~i~~rl~~l 86 (210)
T 3pdy_A 11 LRYLQDLLAWVEENQHRVDGAE--WGVDL--PSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATRGAYRDCLGRL 86 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC--CCSSH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhcccc--cCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHH
Confidence 5677888999999999997642 23221 12334434434444444433344433 45556667
Q ss_pred HHHHHHHHh
Q 015366 162 KTAYLADQR 170 (408)
Q Consensus 162 KE~YL~~rR 170 (408)
.+.|-++++
T Consensus 87 ~~~~~~L~~ 95 (210)
T 3pdy_A 87 DLQYAKLLN 95 (210)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777765543
No 101
>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A
Probab=32.91 E-value=2.1e+02 Score=26.04 Aligned_cols=70 Identities=9% Similarity=0.058 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its--saPQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-+.||+...+.+..+++| ||.+...+....+ .+.. ....+....|+.+-+.+..+...+..+.+.
T Consensus 78 F~~LHe~fee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~emL~~ll~~e~~~i~~~re~i~~ 157 (211)
T 2c2j_A 78 WYTLHELLQDHYEGISKFADDVAERQLSVGASSDGRAITIVAASRLPEIPGGFLDDAQVIQFFTYQYETVGQRIHQRVGD 157 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCCSCCCCCSCEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667889999999999999888 6666544332221 0100 001245556666655555555555444443
Q ss_pred H
Q 015366 158 V 158 (408)
Q Consensus 158 V 158 (408)
.
T Consensus 158 a 158 (211)
T 2c2j_A 158 V 158 (211)
T ss_dssp H
T ss_pred H
Confidence 3
No 102
>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A
Probab=32.32 E-value=2.5e+02 Score=24.31 Aligned_cols=72 Identities=10% Similarity=0.160 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc-cc-cc-chHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS-SL-LQ-SLPQVISNVHIFFVHVAAKAESIHQ 156 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its-sa-PQ-~L~~aL~n~Hq~FVaLAArla~LHE 156 (408)
|..+-..||+...+.+..++++ ||.+...+....+ .+.. .. .- +....|+.+-+.+..+...+..+.+
T Consensus 58 f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~ 137 (175)
T 2wlu_A 58 FLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGLD 137 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566889999999999999988 6666544332221 0000 00 11 5556666666666555555555544
Q ss_pred HHHH
Q 015366 157 YVET 160 (408)
Q Consensus 157 ~Ve~ 160 (408)
..++
T Consensus 138 ~ae~ 141 (175)
T 2wlu_A 138 ITDE 141 (175)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 103
>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A 3g84_A* ...
Probab=31.69 E-value=44 Score=28.08 Aligned_cols=23 Identities=9% Similarity=0.215 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 015366 91 QTVARFEKYLGEFRQWIEELEQL 113 (408)
Q Consensus 91 elV~~FEerL~~yRQqIEELEr~ 113 (408)
+.++.+|.++++++++++.|+..
T Consensus 31 ~~l~~L~~~l~~Lq~~l~~l~~~ 53 (177)
T 1pwb_A 31 QQVEALQGQVQHLQAAFSQYKKV 53 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Confidence 33677778888888888888774
No 104
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=31.26 E-value=2.2e+02 Score=23.47 Aligned_cols=61 Identities=15% Similarity=0.166 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAY 165 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~Y 165 (408)
+.+|..++.+...||.|-|..+.... .. .+..|...+. -|+.|.. .++..++.|+.+.+.-
T Consensus 48 l~~F~~d~~el~~Wi~ek~~~~~~~~---~~-----d~~~v~~~l~-kH~afe~---El~a~~~~l~~v~~~g 108 (149)
T 3f31_A 48 FQFFQRDAEELEKWIQEKLQIASDEN---YK-----DPTNLQGKLQ-KHQAFEA---EVQANSGAIVKLDETG 108 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCS---SC-----SSSCHHHHHH-HHHHHHH---HHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcc---cC-----CHHHHHHHHH-HHHHHHH---HHHHHHHHHHHHHHHH
Confidence 57899999999999999998764321 11 1555655554 5565542 3444444455544433
No 105
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=31.14 E-value=97 Score=23.18 Aligned_cols=69 Identities=9% Similarity=0.101 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETM 161 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~l 161 (408)
|.+..+++++.+..+++.|+.|...-.-.+. .. .. ..-+.+...+.++.+.+..++..|....+..++.
T Consensus 21 ~~~~~~~i~~~l~~L~~~v~~L~~~W~G~a~--~a-f~-~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~~ 89 (99)
T 3zbh_A 21 YNVESSNVTELIARLDQMSHTLQGIWEGASS--EA-FI-QQYQELRPSFEKMAVLLNEVGQQLHNSATILEDT 89 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSHHH--HH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccChHH--HH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556666666666666665543311100 00 00 1133444445555555555555555444444433
No 106
>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}
Probab=31.08 E-value=2.4e+02 Score=23.78 Aligned_cols=72 Identities=15% Similarity=0.128 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGSS-LLQSLPQVISNVHIFFVHVAAKAESIHQYV 158 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~itss-aPQ~L~~aL~n~Hq~FVaLAArla~LHE~V 158 (408)
|..+-..||+...+.+..++++ ||.+...+....+ .+... .-.+....++.+-+.+..+...+..+.+..
T Consensus 49 F~~lH~~~ee~~~~~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~a 128 (159)
T 3iq1_A 49 FFELHAKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKAAQIKEHTDSIDGRSSMQGLVDGFSILLHQQRDILELA 128 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556889999999999999998 6665544322221 01000 113455566666666666655555555544
Q ss_pred HH
Q 015366 159 ET 160 (408)
Q Consensus 159 e~ 160 (408)
++
T Consensus 129 e~ 130 (159)
T 3iq1_A 129 GE 130 (159)
T ss_dssp HH
T ss_pred hH
Confidence 44
No 107
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=31.02 E-value=1e+02 Score=25.42 Aligned_cols=64 Identities=16% Similarity=0.068 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE 163 (408)
+++-|+++++.++.-.+..|=||+....... |++-. .|.++ +.-...++.+++.|...+..+..
T Consensus 20 L~~Ki~el~~ei~ke~~~regl~Km~~vY~~-nP~~G---D~~s~-------~~~L~e~~~kid~L~~el~K~q~ 83 (98)
T 2ke4_A 20 LQQQLEERSRELQKEVDQREALKKMKDVYEK-TPQMG---DPASL-------EPQIAETLSNIERLKLEVQKYEA 83 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH-CGGGC---CGGGS-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC---CHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555555555555544321 22211 13333 33334445566666665555544
No 108
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=30.86 E-value=29 Score=30.56 Aligned_cols=20 Identities=5% Similarity=0.087 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHhhchHHHHH
Q 015366 8 LQERMAVVKDMLRNTEIAVR 27 (408)
Q Consensus 8 lqeL~~~V~~mlrntE~AvR 27 (408)
|......+.+.|+++|...-
T Consensus 23 l~~~a~~~ve~l~~seL~qq 42 (185)
T 3r2p_A 23 LKDSGRDYVSQFEGSALGKQ 42 (185)
T ss_dssp HHHHHHHHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHcchHHHH
Confidence 33444566677777777665
No 109
>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}
Probab=30.33 E-value=2.4e+02 Score=23.60 Aligned_cols=70 Identities=9% Similarity=0.155 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc-ccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS-SLLQSLPQVISNVHIFFVHVAAKAESIHQYV 158 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its-saPQ~L~~aL~n~Hq~FVaLAArla~LHE~V 158 (408)
|..+-..||+...+.+..++++ ||.+...+....+ .+.. ..-.+....|+.+-+.+..+...+..+.+..
T Consensus 43 f~~lh~~~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a 122 (153)
T 2chp_A 43 FFTLHEKFEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHASITDGGNETSASEMVQALVNDYKQISSESKFVIGLA 122 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566899999999999999988 6666544332221 0000 0001455566665555555555444444433
No 110
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=30.17 E-value=2.3e+02 Score=27.92 Aligned_cols=65 Identities=17% Similarity=0.210 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRR 172 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr~ 172 (408)
++..++++..+++.++.+++.+..... . +| .++.-....+++.|.+..+++++.|.+..++.
T Consensus 289 ~~~l~~d~~~L~~~l~~~~~e~~~~d~-----------~----~l---~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yF 350 (402)
T 4eah_A 289 LENVLLDVKELGRGMELIRRECSIHDN-----------S----VL---RNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYF 350 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC-----------T----TT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccch-----------H----HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356777788888888877776642210 1 12 22333456789999999999999999999987
Q ss_pred CCC
Q 015366 173 GDG 175 (408)
Q Consensus 173 GD~ 175 (408)
|..
T Consensus 351 ged 353 (402)
T 4eah_A 351 GES 353 (402)
T ss_dssp TCC
T ss_pred CCC
Confidence 743
No 111
>1k1f_A Breakpoint cluster region protein; oligomerization, coiled coil, BCR-ABL kinase, transferase; 2.20A {Homo sapiens} SCOP: a.147.1.1
Probab=30.09 E-value=48 Score=26.46 Aligned_cols=23 Identities=30% Similarity=0.290 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 015366 93 VARFEKYLGEFRQWIEELEQLIL 115 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~ 115 (408)
|.+.|+.|..||.-|..||+-+.
T Consensus 28 vgdiEqeLe~Ck~sIrrLE~evn 50 (72)
T 1k1f_A 28 VGDIEQELERAKASIRRLEQEVN 50 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999773
No 112
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=30.00 E-value=2.1e+02 Score=24.23 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+.+|..++..+..||+++|..|...
T Consensus 6 l~~F~~~~~dl~~Wl~~~~~~l~~~ 30 (185)
T 3lbx_B 6 KFRFFSMARDLLSWMESIIRQIETQ 30 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5678899999999999999999754
No 113
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=29.52 E-value=1.2e+02 Score=30.21 Aligned_cols=22 Identities=27% Similarity=0.158 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 015366 94 ARFEKYLGEFRQWIEELEQLIL 115 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~ 115 (408)
+.+|++|.+.++++++||+.+.
T Consensus 6 ~~l~~el~~~~~~~~~l~~~~~ 27 (412)
T 3u06_A 6 AALSTEVVHLRQRTEELLRCNE 27 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777777777664
No 114
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=29.25 E-value=1.4e+02 Score=22.17 Aligned_cols=30 Identities=7% Similarity=0.058 Sum_probs=13.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 132 SLPQVISNVHIFFVHVAAKAESIHQYVETM 161 (408)
Q Consensus 132 ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~l 161 (408)
.+...+.++.+..-.++..|..+.+++++.
T Consensus 60 ~~~~~~~~~~~~L~~i~~~L~~~A~~~~~~ 89 (93)
T 4ioe_A 60 QSKQAMQQYIPILEGISTDLKRIADKFRNT 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444444444444444444444444443
No 115
>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A
Probab=29.07 E-value=2.9e+02 Score=24.10 Aligned_cols=69 Identities=7% Similarity=0.142 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--ccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~its--saPQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-..||+...+.+..+++| ||.+...+....+ .+.. ....+....|+.+-+.+..+...+..+.+.
T Consensus 47 F~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ 126 (183)
T 2yw6_A 47 FIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDDYSVERDTVQAHLAALDLVYNGVIEDTRKSIEK 126 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567899999999999999988 6666544332221 0100 001345566666655555555544444443
No 116
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=28.46 E-value=3.4e+02 Score=24.73 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 134 PQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRR 171 (408)
Q Consensus 134 ~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr 171 (408)
+..|..+..|.--|.-+++.+.++|+++++.-.+.+++
T Consensus 70 ~~~i~~m~~yI~llrErea~lEqkVaeq~e~Ve~e~q~ 107 (169)
T 3k29_A 70 SDAILKMKAYIKVVAIQLSEEEEKVNKQKENVLAASKE 107 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788888888888889999999999888887777664
No 117
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=28.21 E-value=2.7e+02 Score=23.45 Aligned_cols=60 Identities=8% Similarity=0.179 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~ 164 (408)
+.+|..++.+...||.|-+..+.... +. .+..|...+ +-|+.|.. .|+.-++.|+.+.+.
T Consensus 58 lq~F~~d~~el~~Wi~ek~~~a~~~~--~~------d~~~v~~ll-~kH~afe~---El~a~~~~~~~l~~~ 117 (161)
T 3lbx_A 58 LQVFKRDADDLGKWIMEKVNILTDKS--YE------DPTNIQGKY-QKHQSLEA---EVQTKSRLMSELEKT 117 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTS--CC------SCCCHHHHH-HHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCCC--cC------CHHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHH
Confidence 46788889999999999888764321 11 155666544 45666553 344445555555443
No 118
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=28.15 E-value=1.7e+02 Score=29.62 Aligned_cols=95 Identities=8% Similarity=0.155 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHhhhhccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccchhhhccCCCCC
Q 015366 5 KAQLQERMAVVKDMLRNTEIAVRSFMMLRPRFLHPNAGSASSATAPSQASGATAAPSSTGQPASSSVVPVFDFYRGLPKK 84 (408)
Q Consensus 5 k~~lqeL~~~V~~mlrntE~AvRsf~~lRprf~r~~~~~~~~~~~~s~~~Ga~~a~~~~~Qp~~~~~~Pv~Dfys~~p~~ 84 (408)
+..|++|...|++.=.-++.+.+.-..|.-..- +.|++.+...=+.+.++.-
T Consensus 37 ~~~l~~LE~~l~elsn~ts~v~~Lvk~iq~~~~-------------------------~~Q~~~~d~~e~~tq~skk--- 88 (409)
T 1m1j_C 37 DGELLEIEGLLQQATNSTGSIEYLIQHIKTIYP-------------------------SEKQTLPQSIEQLTQKSKK--- 88 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-------------------------SSTTCCSSCHHHHHHHHHH---
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------------cccCCCCCchhhHHHHHHH---
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHH
Q 015366 85 PSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHV 147 (408)
Q Consensus 85 PSpFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaL 147 (408)
+.+-+.++|+.+.....+|++||..+... ...|+++.+..+.|
T Consensus 89 ----ml~~~~~~e~~~~~~~~~i~~l~~~~~~~----------------~~~i~~l~~~i~~l 131 (409)
T 1m1j_C 89 ----IIEEIIRYENTILAHENTIQQLTDMHIMN----------------SNKITQLKQKIAQL 131 (409)
T ss_dssp ----HHHHHHHTHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhcchHHHHHHHHHHHHhh----------------HHHHHHHHHHHHHH
No 119
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=27.92 E-value=3.3e+02 Score=24.38 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 015366 94 ARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~s 116 (408)
.+|...+..+..||++.|..+..
T Consensus 113 ~~f~~~~~~l~~Wl~~~e~~l~~ 135 (326)
T 3kbt_A 113 FQLKRETDDLEQWISEKELVASS 135 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc
Confidence 46777788888899999998863
No 120
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=27.07 E-value=1.1e+02 Score=24.99 Aligned_cols=31 Identities=29% Similarity=0.350 Sum_probs=14.2
Q ss_pred hhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 75 FDFYRGLPKKPSAFLQQTVARFEKYLGEFRQWIEE 109 (408)
Q Consensus 75 ~Dfys~~p~~PSpFF~elV~~FEerL~~yRQqIEE 109 (408)
.|-++. ..|++.||++|+ |+|=..+..-++|
T Consensus 17 eDL~~~--e~Pse~YWk~lA--E~RR~AL~eaL~E 47 (83)
T 1uii_A 17 FDLMIK--ENPSSQYWKEVA--EKRRKALYEALKE 47 (83)
T ss_dssp --------CCHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HHHHhc--CCChHHHHHHHH--HHHHHHHHHHHHH
Confidence 454443 378888888776 3333333333443
No 121
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=27.07 E-value=76 Score=25.50 Aligned_cols=28 Identities=14% Similarity=0.376 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s 116 (408)
|-+++..|+.-=+..+|.|..||+.+..
T Consensus 23 fARLLaEy~ssQ~KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 23 FARILAEYESMQQKLKQRLTKVEKFLKP 50 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5678888888888899999999998853
No 122
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=26.96 E-value=3e+02 Score=23.58 Aligned_cols=25 Identities=24% Similarity=0.535 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
..+|..++..+..|++++|..|...
T Consensus 15 ~~~F~~~~~~l~~Wl~~~~~~l~~~ 39 (218)
T 3fb2_A 15 LQRFLSDFRDLMSWINGIRGLVSSD 39 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6789999999999999999999643
No 123
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=26.67 E-value=2.8e+02 Score=23.10 Aligned_cols=23 Identities=9% Similarity=0.297 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 015366 95 RFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 95 ~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+|++-+..|++-||.+-+.+...
T Consensus 33 ~y~eAl~lY~~Aie~l~~alk~e 55 (117)
T 2cpt_A 33 NYEEALQLYQHAVQYFLHVVKYE 55 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc
Confidence 68888888998888888887644
No 124
>1gl2_B Syntaxin 7; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Mus musculus} SCOP: h.1.15.1
Probab=26.09 E-value=95 Score=23.19 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=22.3
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 130 LQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (408)
Q Consensus 130 PQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~ 164 (408)
..+|...++.|-+..-.+-..++..+++|+...+.
T Consensus 25 F~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~e 59 (65)
T 1gl2_B 25 FKDLGMMIHEQGDVIDSIEANVESAEVHVQQANQQ 59 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666667777666666666666666666655443
No 125
>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2
Probab=25.39 E-value=3.4e+02 Score=23.64 Aligned_cols=83 Identities=12% Similarity=0.118 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHH-------------HHHHHH
Q 015366 92 TVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAE-------------SIHQYV 158 (408)
Q Consensus 92 lV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla-------------~LHE~V 158 (408)
...+|..+|.++.+.|..+-+.|-..+. ..|.+|...-.++-..|..||.... .|...|
T Consensus 13 sfvdYQt~m~~~~K~iA~~aqemv~ks~--------~~p~eL~~la~~lt~~Y~~La~~~~~A~~~~~~~~v~~~Ir~~V 84 (137)
T 2b0h_A 13 SFVDYQTTMVRTAKAIAVTVQEMVTKSN--------TSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRV 84 (137)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT--------TCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcccC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 5678999999999999999998854432 2378999999999999888877543 344445
Q ss_pred HHHHHHHHHHHh----hcCCCCCcchhh
Q 015366 159 ETMKTAYLADQR----RRGDGSDPFLEA 182 (408)
Q Consensus 159 e~lKE~YL~~rR----r~GD~~DPFaEA 182 (408)
+++=..=.+.=. ...|.+|++...
T Consensus 85 q~LG~ac~~lV~~ag~~q~~p~d~~~q~ 112 (137)
T 2b0h_A 85 QELGHGCSALVTKAGALQCSPSDVYTKK 112 (137)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHhHHHHHHHHHHhhccCCcccHHHHH
Confidence 555332333322 255778888544
No 126
>2zsh_B Della protein GAI; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_B*
Probab=25.24 E-value=52 Score=28.20 Aligned_cols=45 Identities=13% Similarity=0.113 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc----cccchHHHHHHHHH
Q 015366 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSS----LLQSLPQVISNVHI 142 (408)
Q Consensus 98 erL~~yRQqIEELEr~L~s~s~~~~S~itss----aPQ~L~~aL~n~Hq 142 (408)
-+|....|+||+||.+|....+..-+++.++ .|-||..=++.+-.
T Consensus 38 SDma~vAQkLEqLE~vmg~a~~dgls~LasDTVHyNPSDLs~WvesMLs 86 (110)
T 2zsh_B 38 SEMADVAQKLEQLEVMMSNVQEDDLSQLATETVHYNPAELYTWLDSMLT 86 (110)
T ss_dssp GGHHHHHHHHHHHHHHHTTC-------CHHHHTTSCTTBHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHccccchhHHHhhhhhhcCChHHHHHHHHHHHH
Confidence 4688899999999999953322112333222 47777776665543
No 127
>1fzc_B Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_B* 1fza_B* 1fze_B* 1fzf_B* 1fzg_B* 1n86_B* 1n8e_B 2h43_B* 2hlo_B* 2hod_B* 2hpc_B* 2q9i_B* 2xnx_B 2xny_B 3e1i_B* 2z4e_B* 2oyh_B* 1ltj_B* 1rf0_B* 1lt9_B* ...
Probab=25.09 E-value=86 Score=30.67 Aligned_cols=26 Identities=8% Similarity=0.148 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 136 VISNVHIFFVHVAAKAESIHQYVETM 161 (408)
Q Consensus 136 aL~n~Hq~FVaLAArla~LHE~Ve~l 161 (408)
.|+.+.+.+.++-.||+.|.++|+++
T Consensus 31 ~I~~Lq~~le~l~~KIq~Le~~v~~~ 56 (328)
T 1fzc_B 31 NLRVLRSILENLRSKIQKLESDVSAQ 56 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445555555555544433
No 128
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=25.07 E-value=3.1e+02 Score=23.08 Aligned_cols=24 Identities=17% Similarity=0.486 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 94 ARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
.+|..++..+..||++.|..|...
T Consensus 3 q~F~~~~~~l~~Wl~~~~~~l~~~ 26 (214)
T 1s35_A 3 QAFLQDLDDFQAWLSITQKAVASE 26 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999643
No 129
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=24.99 E-value=72 Score=28.29 Aligned_cols=30 Identities=10% Similarity=0.223 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDP 118 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s 118 (408)
+.+-|+++|..|.+-+++|++||+.+....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 34 (198)
T 4ghu_A 5 LESQLSRHDQMLSVHDIRLADMDLRFQVLE 34 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456688999999999999999999986543
No 130
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=24.89 E-value=1.4e+02 Score=29.48 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=38.8
Q ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHH-HHH
Q 015366 78 YRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVH-VAA 149 (408)
Q Consensus 78 ys~~p~~PSpFF~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVa-LAA 149 (408)
||+.|+.|. |-+... |+++..+++++|+++-.....+ + =..+++++|+.|.. |+.
T Consensus 208 ySr~Pe~Pl--fGraAR--E~rle~L~~ere~~~e~~a~~a------f-------d~qk~qRl~q~~~~fv~~ 263 (302)
T 3ibp_A 208 YSRFPEVPL--FGRAAR--ESRIESLHAEREVLSERFATLS------F-------DVQKTQRLHQAFSRFIGS 263 (302)
T ss_dssp EEECCSSCS--SCHHHH--HHHHHHHHHHHHHHHHHHHHHH------H-------HHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCc--ccHHHH--HHHHHHHHHHHHHHHHHHHHHh------h-------HHHHHHHHHHHHHHHHhh
Confidence 777777775 444443 8999999999999986554332 0 15678888888887 654
No 131
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=24.47 E-value=1.2e+02 Score=24.74 Aligned_cols=44 Identities=20% Similarity=0.238 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC--CCCCCCCcccccchHHHHHHHHHH
Q 015366 95 RFEKYLGEFRQWIEELEQLILLDPD--RNSSSHGSSLLQSLPQVISNVHIF 143 (408)
Q Consensus 95 ~FEerL~~yRQqIEELEr~L~s~s~--~~~S~itssaPQ~L~~aL~n~Hq~ 143 (408)
+.+.++...+.++++||+.+..... ++. +.-+.+...+..+|+|
T Consensus 5 ~L~~~i~~L~~q~~~L~~ei~~~~a~L~~~-----~~~~~~~~hI~~Lh~Y 50 (85)
T 3viq_B 5 QLESRVHLLEQQKEQLESSLQDALAKLKNR-----DAKQTVQKHIDLLHTY 50 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSSS-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CHHHHHHHHHHHHHHH
Confidence 4455555555555555555422110 011 1124466677777766
No 132
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=24.39 E-value=1.3e+02 Score=27.93 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 138 SNVHIFFVHVAAKAESIHQYVETMKTAYLADQRR 171 (408)
Q Consensus 138 ~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr 171 (408)
..+.+-.-.+-++++.+.+++..++..|=|+|||
T Consensus 62 ~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR 95 (213)
T 4ani_A 62 AAAKAQIAELEAKLSEMEHRYLRLYADFENFRRR 95 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444445555555555555555555665
No 133
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=24.30 E-value=2.4e+02 Score=21.60 Aligned_cols=23 Identities=9% Similarity=0.197 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 015366 95 RFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 95 ~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+|++-+..|++-||.+-+.+...
T Consensus 28 ~y~eAl~~Y~~aie~l~~a~k~e 50 (85)
T 2v6x_A 28 QYEEAYTAYYNGLDYLMLALKYE 50 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhC
Confidence 68888999999999988888655
No 134
>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1
Probab=24.23 E-value=1.4e+02 Score=26.99 Aligned_cols=51 Identities=16% Similarity=0.232 Sum_probs=35.1
Q ss_pred cccchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCcc
Q 015366 129 LLQSLPQVISNVHIFFVHVA---AKAESIHQYVETMKTAYLADQRRRG-----DGSDPF 179 (408)
Q Consensus 129 aPQ~L~~aL~n~Hq~FVaLA---Arla~LHE~Ve~lKE~YL~~rRr~G-----D~~DPF 179 (408)
...+|-.++.++....-+.. ..+..|++.|+.....+++...+.| ...+||
T Consensus 91 ~~~~LLpv~DnlerAl~~~~~~~~~~~~l~~Gv~~~~~~l~~~L~~~Gv~~i~~~G~~F 149 (197)
T 1dkg_A 91 FINELLPVIDSLDRALEVADKANPDMSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPL 149 (197)
T ss_dssp HHHHSHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHTTTTEEEECCCSSBC
T ss_pred HHHHHHHHHhHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCC
Confidence 35667777777777765431 1356788999999999998888544 445788
No 135
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=24.12 E-value=3e+02 Score=22.57 Aligned_cols=20 Identities=30% Similarity=0.283 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHhhcCCC
Q 015366 100 LGEFRQWIEELEQLILLDPD 119 (408)
Q Consensus 100 L~~yRQqIEELEr~L~s~s~ 119 (408)
++.||+.|++||+=|.....
T Consensus 39 ~~~YkkGi~eL~~Gi~V~~~ 58 (89)
T 3eab_A 39 VEWYKKGIEELEKGIAVIVT 58 (89)
T ss_dssp HHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHhhcCCccC
Confidence 99999999999999987654
No 136
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=23.83 E-value=2.5e+02 Score=21.56 Aligned_cols=65 Identities=11% Similarity=0.107 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRR 171 (408)
Q Consensus 98 erL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~lKE~YL~~rRr 171 (408)
.|....+..+++|-.+|....+ . -.+=..+|..--+|.-.|-.+++.+.++++++|+.--.++.+
T Consensus 12 ~RR~~in~~f~~Lr~lvP~~~~--~-------k~sK~~iL~~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~ 76 (83)
T 1nkp_B 12 KRRDHIKDSFHSLRDSVPSLQG--E-------KASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQ 76 (83)
T ss_dssp HHHHHHHHHHHHHHTTSGGGTT--S-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCC--C-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667788899999999976432 1 134467888888899999889999999999998876666553
No 137
>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A
Probab=23.78 E-value=3.3e+02 Score=23.00 Aligned_cols=30 Identities=7% Similarity=0.201 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCC
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDP 118 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s 118 (408)
|..+-..||+...+.+..++++ ||.+...+
T Consensus 51 f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg 81 (161)
T 2yjk_A 51 FIAIHELLDSVVAHAQDYADTAAERIVALGL 81 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5667899999999999999988 66665443
No 138
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=23.29 E-value=86 Score=22.70 Aligned_cols=23 Identities=26% Similarity=0.225 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 015366 94 ARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 94 ~~FEerL~~yRQqIEELEr~L~s 116 (408)
+.+|+||......++.|...|++
T Consensus 19 e~LE~Ri~~LE~KLd~L~~~l~a 41 (43)
T 2pnv_A 19 EDFEKRIVTLETKLETLIGSIHA 41 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 45666666666666666666654
No 139
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=23.21 E-value=3.8e+02 Score=25.81 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=22.6
Q ss_pred hhccCCCCCccHHHHHHHHHHHHHHHHHHHH
Q 015366 76 DFYRGLPKKPSAFLQQTVARFEKYLGEFRQW 106 (408)
Q Consensus 76 Dfys~~p~~PSpFF~elV~~FEerL~~yRQq 106 (408)
+++.|- .-|-+-+.++.++.++.|.+++.+
T Consensus 363 ~vl~G~-~t~eeal~~~~~~i~~~l~~~~~~ 392 (471)
T 3mq9_A 363 NAASGR-QTVDEALKDAQTRITAARDGLRAV 392 (471)
T ss_dssp HHHHSS-SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCC-CCHHHHHHHHHHHHHHHHHhhHHH
Confidence 445564 578889999999988888777654
No 140
>2d4x_A Flagellar HOOK-associated protein 3; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 1.90A {Salmonella typhimurium}
Probab=23.17 E-value=2e+02 Score=25.70 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHh
Q 015366 97 EKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVA------AKAESIHQYVETMKTAYLADQR 170 (408)
Q Consensus 97 EerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLA------Arla~LHE~Ve~lKE~YL~~rR 170 (408)
..+|.+|.+-|.+....|+... .++..+...|+++.+.-|+.+ ...+.|.++++.++++.+..-.
T Consensus 18 ~~~l~q~~~n~~~~~s~l~~ae---------~aL~~i~~~l~r~rel~vqa~ngt~s~~dr~~i~~e~~~l~~~i~~~an 88 (248)
T 2d4x_A 18 QAQNSQYALARTFATQKVSLEE---------SVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLMNLAN 88 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445556666666666665431 247888899999999988764 5677888888888888888766
Q ss_pred hc-CCCCCcch
Q 015366 171 RR-GDGSDPFL 180 (408)
Q Consensus 171 r~-GD~~DPFa 180 (408)
.. .+.+..|.
T Consensus 89 ~~~~nG~~lf~ 99 (248)
T 2d4x_A 89 STDGNGRYIFA 99 (248)
T ss_dssp CBCTTSCBTTS
T ss_pred cCCCCCceeec
Confidence 43 55666773
No 141
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=23.16 E-value=1.4e+02 Score=30.17 Aligned_cols=23 Identities=13% Similarity=0.163 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 015366 95 RFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 95 ~FEerL~~yRQqIEELEr~L~s~ 117 (408)
+|-.+..+...||.|.|..|...
T Consensus 203 QF~~Da~EaesWL~eke~~l~s~ 225 (450)
T 3r6n_A 203 QFFEEAQSTEAYLKGLQDSIRKK 225 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccc
Confidence 45555566677888888888654
No 142
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A
Probab=23.12 E-value=2.5e+02 Score=30.64 Aligned_cols=63 Identities=14% Similarity=0.092 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVET 160 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~LHE~Ve~ 160 (408)
+.....+++++|+.+++.|+.+|+.|... + .-..+|+++.. +-.+-...+-++++.|.++++.
T Consensus 798 ~~~~~~rl~k~~~~~~~~~~~~~~~l~~~-----~-f~~~ap~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 860 (862)
T 1gax_A 798 VEEWRRRQEKRLKELLALAERSQRKLASP-----G-FREKAPKEVVE---AEEARLKENLEQAERIREALSQ 860 (862)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTST-----T-TSSSSCTTHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCc-----h-hhhhCCHHHHH---HHHHHHHHHHHHHHHHHHHHHh
Confidence 56778999999999999999999988532 1 12245766633 3333333344445555555444
No 143
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=23.02 E-value=2.1e+02 Score=23.99 Aligned_cols=26 Identities=19% Similarity=0.167 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 89 LQQTVARFEKYLGEFRQWIEELEQLI 114 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEELEr~L 114 (408)
+.+-|+.+|..-..+|+.|++||.-|
T Consensus 17 lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 17 LRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45668888888889999999999877
No 144
>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*
Probab=22.83 E-value=3.6e+02 Score=23.01 Aligned_cols=71 Identities=18% Similarity=0.245 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCccc--c-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGSSL--L-QSLPQVISNVHIFFVHVAAKAESIHQ 156 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~itssa--P-Q~L~~aL~n~Hq~FVaLAArla~LHE 156 (408)
|..+-..||+...+.+..+++| ||.+...+..+.+ .+.... . .++...|+.+-+.+..+...+..+.+
T Consensus 48 f~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~ 127 (165)
T 2cf7_A 48 FMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKEVLGDYNVTIEEQLARVVEVFRYLAALFQKGFD 127 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566889999999999999988 6666544332221 010000 1 14455666665555555555444444
Q ss_pred HHH
Q 015366 157 YVE 159 (408)
Q Consensus 157 ~Ve 159 (408)
..+
T Consensus 128 ~a~ 130 (165)
T 2cf7_A 128 VSD 130 (165)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 145
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=22.82 E-value=2.6e+02 Score=23.63 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=23.2
Q ss_pred chHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHH
Q 015366 132 SLPQVISNVHIFFVHV---------AAKAESIHQYVETMKTAYLA 167 (408)
Q Consensus 132 ~L~~aL~n~Hq~FVaL---------AArla~LHE~Ve~lKE~YL~ 167 (408)
+|+.-|.++|+|++.- .+.++++..-++++|+.+-+
T Consensus 80 eiA~nL~~LY~y~~~~L~~An~~~d~~~l~ev~~ll~~lr~aW~~ 124 (131)
T 3iqc_A 80 EVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWRE 124 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHH
Confidence 6888899999998843 23445555555666655443
No 146
>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A
Probab=22.32 E-value=4.3e+02 Score=23.79 Aligned_cols=69 Identities=12% Similarity=0.154 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCcc--cccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGSS--LLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~itss--aPQ~L~~aL~n~Hq~FVaLAArla~LHE~ 157 (408)
|..+-..||+...+.+..+++| ||.+...+..+.+ .+... ...+....|+.+-+.+..+...+..+.+.
T Consensus 91 F~~LHe~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~I~e~~~g~~~~~emL~~ll~~e~~~i~~~re~i~~ 170 (207)
T 2c2u_A 91 FRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYSTVQVPQETVRDARTQVADLVQDLSRVGKGYRDDSQA 170 (207)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHCSSCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777888888888888877 6666544332221 11100 01245555555555555554444444443
No 147
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=21.90 E-value=1.7e+02 Score=25.93 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHH
Q 015366 91 QTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHI 142 (408)
Q Consensus 91 elV~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq 142 (408)
+|-+.||+-+.+-++||+.||+++...+. .++... +..+...+..-.+
T Consensus 46 ~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~-~~~~~~---c~am~gli~e~~~ 93 (173)
T 2gyq_A 46 DLSQGLTSHLEETQKQIERLDQVFKKLGQ-KPSGVN---CPAIDGLIKEADE 93 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CSCSCC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC---chHHHHHHHHHHH
Confidence 46889999999999999999999977643 233222 4455555554444
No 148
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=21.86 E-value=77 Score=27.37 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015366 88 FLQQTVARFEKYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 88 FF~elV~~FEerL~~yRQqIEELEr~L~s~ 117 (408)
=+.+.+++.|.++.+.+++|++||..|...
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (192)
T 1ca9_A 7 ALSSKVQQLERSIGLKDLAMADLEQKVLEM 36 (192)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355667788888888888888888777543
No 149
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=21.80 E-value=2.2e+02 Score=25.01 Aligned_cols=28 Identities=21% Similarity=0.246 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-CC
Q 015366 91 QTVARFEKYLGEFRQWIEELEQLILL-DP 118 (408)
Q Consensus 91 elV~~FEerL~~yRQqIEELEr~L~s-~s 118 (408)
+|-+.||+-+.+-++||+.||+++.. .+
T Consensus 39 ~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg 67 (166)
T 2gs4_A 39 KLSQAFHAHLEETHGQIERIDQVVESESN 67 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999987 54
No 150
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=21.76 E-value=1.2e+02 Score=24.01 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 015366 93 VARFEKYLGEFRQWIEELEQLI 114 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L 114 (408)
+.+.|.++.--...||+|-..+
T Consensus 16 i~~LE~klAfqE~tIeeLn~~v 37 (78)
T 3efg_A 16 LVELETRLSFQEQALTELSEAL 37 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444
No 151
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=21.67 E-value=3.2e+02 Score=22.04 Aligned_cols=25 Identities=36% Similarity=0.450 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 015366 91 QTVARFEKYLGEFRQWIEELEQLIL 115 (408)
Q Consensus 91 elV~~FEerL~~yRQqIEELEr~L~ 115 (408)
++|.+.|..|.+...-|++||--+.
T Consensus 38 ~~i~~ie~~l~EA~ell~qMelE~r 62 (102)
T 1vcs_A 38 QMVANVEKQLEEARELLEQMDLEVR 62 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555555543
No 152
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=21.60 E-value=4.2e+02 Score=24.16 Aligned_cols=23 Identities=13% Similarity=0.339 Sum_probs=19.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHH
Q 015366 85 PSAFLQQTVARFEKYLGEFRQWI 107 (408)
Q Consensus 85 PSpFF~elV~~FEerL~~yRQqI 107 (408)
=.||..++-.+.++.|.+||+++
T Consensus 97 l~Py~~el~~~~~~~~eelr~~L 119 (243)
T 2a01_A 97 VQPYLDDFQKKWQEEMELYRQKV 119 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHH
Confidence 37899999999999999999744
No 153
>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A
Probab=21.59 E-value=3.6e+02 Score=22.56 Aligned_cols=72 Identities=11% Similarity=0.168 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCcc--ccc-chHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGSS--LLQ-SLPQVISNVHIFFVHVAAKAESIHQ 156 (408)
Q Consensus 89 F~elV~~FEerL~~yRQqIEEL-Er~L~s~s~~~~S--------~itss--aPQ-~L~~aL~n~Hq~FVaLAArla~LHE 156 (408)
|..+-..||+...+.+..++++ ||.+...+....+ .+... ..- +....|+.+-+.+..+...+..+.+
T Consensus 39 f~~lh~~~ee~~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s~l~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~ 118 (156)
T 2bk6_A 39 FFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIE 118 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567899999999999999988 6666544332221 01100 011 5666777766666666666655555
Q ss_pred HHHH
Q 015366 157 YVET 160 (408)
Q Consensus 157 ~Ve~ 160 (408)
..++
T Consensus 119 ~a~~ 122 (156)
T 2bk6_A 119 LTDK 122 (156)
T ss_dssp HHHH
T ss_pred HHhH
Confidence 4444
No 154
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=21.57 E-value=3.8e+02 Score=22.90 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 015366 93 VARFEKYLGEFRQWIEELEQLILL 116 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s 116 (408)
+.+|..++..+..||.+-|..+..
T Consensus 3 L~~f~~~~~~l~~Wl~~ke~~l~~ 26 (218)
T 3edu_A 3 LFQLKRETDDLEQWISEKELVASS 26 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 358999999999999999999864
No 155
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=21.43 E-value=57 Score=32.23 Aligned_cols=65 Identities=14% Similarity=0.139 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHH------HHHHH--HHHHHHHHHHHHHHHh
Q 015366 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAA------KAESI--HQYVETMKTAYLADQR 170 (408)
Q Consensus 100 L~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAA------rla~L--HE~Ve~lKE~YL~~rR 170 (408)
+..++++.|++|+.+..+.+ .+ .-.+++...|+++++.++..-. .-+.+ -|+|...=|+||+.|.
T Consensus 271 ~~~L~e~Ae~ie~~i~el~~--~~----~e~~~~V~~LE~qyD~~~~~~~~~~l~~~~~~~ps~dei~~efErfL~~~~ 343 (351)
T 2wam_A 271 LAVLAEAAAEVQAKIDEQVQ--AS----AEVAQVVAALERQYDAFIDAQENRSLLTRDEDLPSGDELGAEFERFLAQQA 343 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHT--TC----HHHHHHHHHHHHHHHHHHHHHHHTTC-------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH--hC----HHHHHHHHHHHhhhchhhhhcccccccccccCCCCHHHHHHHHHHHHHhcC
Confidence 34555566666665543322 11 1144556788888888765321 11123 4566777788888665
No 156
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=21.16 E-value=3.5e+02 Score=24.16 Aligned_cols=53 Identities=9% Similarity=0.109 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHH
Q 015366 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAES 153 (408)
Q Consensus 93 V~~FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FVaLAArla~ 153 (408)
..+|..+|.++.+.|..+-+.|-+.+. ..|.+|...-.++-..|..||...-.
T Consensus 42 f~dYQt~m~~~~K~iA~~aq~mv~k~~--------~~p~eL~~la~~it~~y~~La~~~~~ 94 (165)
T 2kvp_A 42 FVDYQTTMVRTAKAIAVTVQEMVTKSN--------TSPEELGPLANQLTSDYGRLASQAKP 94 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccC--------CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999888854321 23899999999999999988876543
No 157
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=20.50 E-value=2.3e+02 Score=26.55 Aligned_cols=25 Identities=8% Similarity=0.198 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 015366 88 FLQQTVARFEKYLGEFRQWIEELEQ 112 (408)
Q Consensus 88 FF~elV~~FEerL~~yRQqIEELEr 112 (408)
|+.++|.-+|+++....+.|..+++
T Consensus 100 ~~~~li~pL~~kie~d~K~v~~~~K 124 (253)
T 2ykt_A 100 FHNELLTQLEQKVELDSRYLSAALK 124 (253)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4444466666666666555554444
No 158
>3c98_B Syntaxin-1A; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus}
Probab=20.43 E-value=3.7e+02 Score=23.21 Aligned_cols=28 Identities=18% Similarity=0.432 Sum_probs=20.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 86 SAFLQQTVARFEKYLGEFRQWIEELEQLI 114 (408)
Q Consensus 86 SpFF~elV~~FEerL~~yRQqIEELEr~L 114 (408)
.+||.+ |+.....|..+...+++|.+..
T Consensus 43 ~ef~~~-ve~i~~~i~~i~~~v~el~~~~ 70 (279)
T 3c98_B 43 DEFFEQ-VEEIRGFIDKIAENVEEVKRKH 70 (279)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 455554 6778888888888888887654
No 159
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=20.41 E-value=2.5e+02 Score=26.03 Aligned_cols=27 Identities=15% Similarity=0.207 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015366 144 FVHVAAKAESIHQYVETMKTAYLADQR 170 (408)
Q Consensus 144 FVaLAArla~LHE~Ve~lKE~YL~~rR 170 (408)
.-.+..+++.+.++++++|+.||+.+.
T Consensus 61 ~~~l~~~l~~l~~e~~el~d~~lR~~A 87 (213)
T 4ani_A 61 LAAAKAQIAELEAKLSEMEHRYLRLYA 87 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677777777777777776655
No 160
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=20.11 E-value=5.5e+02 Score=24.14 Aligned_cols=21 Identities=14% Similarity=0.181 Sum_probs=10.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHH
Q 015366 86 SAFLQQTVARFEKYLGEFRQW 106 (408)
Q Consensus 86 SpFF~elV~~FEerL~~yRQq 106 (408)
.||-.++..++.++|+.||++
T Consensus 32 ~P~~~~l~~~l~~~le~lr~~ 52 (273)
T 3s84_A 32 LPHANEVSQKIGDNLRELQQR 52 (273)
T ss_dssp GGGHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555543
No 161
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=20.11 E-value=3.3e+02 Score=22.30 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccchHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHH
Q 015366 96 FEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFV---------HVAAKAESIHQYVETMKTAYL 166 (408)
Q Consensus 96 FEerL~~yRQqIEELEr~L~s~s~~~~S~itssaPQ~L~~aL~n~Hq~FV---------aLAArla~LHE~Ve~lKE~YL 166 (408)
-|+|-..+++.|++||+-+.-... =...|.++++.+. .++.+|.++..+++.++..--
T Consensus 13 peqRkkkL~~Ki~el~~ei~ke~~-------------~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~el~ 79 (98)
T 2ke4_A 13 PEQQRKRLQQQLEERSRELQKEVD-------------QREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKLEVQ 79 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------------HHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999965422 1557788888765 678888888888888877654
Q ss_pred HH
Q 015366 167 AD 168 (408)
Q Consensus 167 ~~ 168 (408)
.+
T Consensus 80 K~ 81 (98)
T 2ke4_A 80 KY 81 (98)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 162
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=20.07 E-value=82 Score=22.99 Aligned_cols=20 Identities=10% Similarity=-0.002 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q 015366 98 KYLGEFRQWIEELEQLILLD 117 (408)
Q Consensus 98 erL~~yRQqIEELEr~L~s~ 117 (408)
.+++.+++.|++||..|...
T Consensus 49 ~~~~~Le~ri~~Le~~l~~l 68 (72)
T 2er8_A 49 ARNEAIEKRFKELTRTLTNL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45555666677777766543
Done!