Citrus Sinensis ID: 015367
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 408 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LU72 | 397 | Probable inactive purple | yes | no | 0.950 | 0.977 | 0.647 | 1e-156 | |
| Q9FMK9 | 389 | Probable inactive purple | no | no | 0.825 | 0.866 | 0.504 | 4e-98 | |
| Q84LR6 | 401 | Probable inactive purple | no | no | 0.833 | 0.847 | 0.495 | 1e-85 | |
| Q05924 | 578 | Phosphatase DCR2 OS=Sacch | yes | no | 0.735 | 0.519 | 0.334 | 2e-34 | |
| Q9SR79 | 367 | Probable inactive purple | no | no | 0.723 | 0.803 | 0.266 | 6e-25 | |
| O59759 | 509 | Uncharacterized protein C | yes | no | 0.686 | 0.550 | 0.298 | 2e-24 | |
| Q12212 | 622 | Protein SIA1 OS=Saccharom | no | no | 0.620 | 0.406 | 0.249 | 3e-15 | |
| Q6CPQ2 | 578 | Protein SIA1 OS=Kluyverom | no | no | 0.688 | 0.486 | 0.228 | 7e-12 |
| >sp|Q9LU72|PPA28_ARATH Probable inactive purple acid phosphatase 28 OS=Arabidopsis thaliana GN=PAP28 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 552 bits (1422), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/397 (64%), Positives = 316/397 (79%), Gaps = 9/397 (2%)
Query: 11 NWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADM 70
NWKH++LY+TLI ++++F++ I KL I+++KI LK+ P+LPLRFR DGTFKILQVADM
Sbjct: 7 NWKHTVLYLTLIVSLLYFIESLISHKLHINYNKIRLKRSPNLPLRFRDDGTFKILQVADM 66
Query: 71 HYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAES 130
H+GMG +TRCRDV +EF+YCSDLNTTRFL+R+IE+E+PD IAFTGDNIFGSSTTD AES
Sbjct: 67 HFGMGMITRCRDVLDSEFEYCSDLNTTRFLRRMIESERPDLIAFTGDNIFGSSTTDAAES 126
Query: 131 MIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKG 190
+++A GPA+E G+PWAAVLGNHD EST++R ELM F+SLMD+SV+Q+NP ED + KG
Sbjct: 127 LLEAIGPAIEYGIPWAAVLGNHDHESTLNRLELMTFLSLMDFSVSQINPLVEDET---KG 183
Query: 191 GVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWL 250
M IDGFGNY +RVYG PGS LANS++ +LFF DSGDRE V+G RTYG+IKESQLRWL
Sbjct: 184 DTMRLIDGFGNYRVRVYGAPGSVLANSTVFDLFFFDSGDREIVQGKRTYGWIKESQLRWL 243
Query: 251 HRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGV 310
S +QG Q ++ P LAFFHIPI E +L+Y +GQFQE VACS V SGV
Sbjct: 244 QDTS--IQGHSQ----RIHVNPPALAFFHIPILEVRELWYTPFIGQFQEGVACSIVQSGV 297
Query: 311 LQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEAG 370
LQT VS+G++KA F+GHDH NDFCG L G+WFCYGGG GYH YG+ W RRAR+I A+ G
Sbjct: 298 LQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLG 357
Query: 371 KGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPS 407
KG + W +++IKTWKRLDD+ LSKIDEQVLWE S
Sbjct: 358 KGRDTWEGIKLIKTWKRLDDEYLSKIDEQVLWETSDS 394
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FMK9|PPA29_ARATH Probable inactive purple acid phosphatase 29 OS=Arabidopsis thaliana GN=PAP29 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (919), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 229/355 (64%), Gaps = 18/355 (5%)
Query: 54 LRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIA 113
LRF +G FKILQVADMH+ G T+C++V ++ +CSDLNTT F+ R+I AEKPD I
Sbjct: 39 LRFSVNGEFKILQVADMHFANGAKTQCQNVLPSQRAHCSDLNTTIFMSRVIAAEKPDLIV 98
Query: 114 FTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYS 173
FTGDNIFG D +S+ AF PA+ +PW A+LGNHDQEST R+++M I + +
Sbjct: 99 FTGDNIFGFDVKDALKSINAAFAPAIASKIPWVAILGNHDQESTFTRQQVMNHIVKLPNT 158
Query: 174 VAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETV 233
++QVNPP IDGFGNY+L+++G S L N S+LNL+FLDSGD +V
Sbjct: 159 LSQVNPPE----------AAHYIDGFGNYNLQIHGAADSKLQNKSVLNLYFLDSGDYSSV 208
Query: 234 RGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQ---LPGLAFFHIPIPETPQLYY 290
+ Y +IK SQ W R S+ L K++ N K Q PGLA+FHIP+PE
Sbjct: 209 PYMEGYDWIKTSQQFWFDRTSKRL---KREYNAKPNPQEGIAPGLAYFHIPLPEFLSFDS 265
Query: 291 QNIV-GQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIG 349
+N G QE + + NSG TL++ GD+K+VFVGHDH NDFCG L G+ CYGGG G
Sbjct: 266 KNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLCYGGGFG 325
Query: 350 YHGYGKAGWPRRARIILAEAGKGENG-WMEVEMIKTWKRLDDQRLSKIDEQVLWE 403
YH YGKAGW RRAR+++ + K G W V+ IKTWKRLDD+ LS ID QVLW
Sbjct: 326 YHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLWN 380
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q84LR6|PPA14_ARATH Probable inactive purple acid phosphatase 14 OS=Arabidopsis thaliana GN=PAP14 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 317 bits (812), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/353 (49%), Positives = 222/353 (62%), Gaps = 13/353 (3%)
Query: 54 LRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIA 113
LRF DG FKILQV+DMHYG GK T+C DV+ EF YCSDLNTT FL+R I +EKPD I
Sbjct: 38 LRFNTDGRFKILQVSDMHYGFGKETQCSDVSPAEFPYCSDLNTTSFLQRTIASEKPDLIV 97
Query: 114 FTGDNIFG-SSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDY 172
F+GDN++G T+DVA+SM AF PA+E G+PW A+LGNHDQES M RE +M +I +
Sbjct: 98 FSGDNVYGLCETSDVAKSMDMAFAPAIESGIPWVAILGNHDQESDMTRETMMKYIMKLPN 157
Query: 173 SVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRET 232
S++QVNPP + +IDGFGNY+L++ GP GS L SILNL+ LD G
Sbjct: 158 SLSQVNPP---------DAWLYQIDGFGNYNLQIEGPFGSPLFFKSILNLYLLDGGSYTK 208
Query: 233 VRGV-RTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQ 291
+ G Y ++K SQ W S+ L+ + + + PGL + HIP+PE
Sbjct: 209 LDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPGLVYLHIPMPEFALFNKS 268
Query: 292 N-IVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGY 350
+ G QE+ +NSG LV G++K VF GHDH NDFC L+GI CY GG GY
Sbjct: 269 TEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDFCAELHGINLCYAGGAGY 328
Query: 351 HGYGKAGWPRRARIILAEAGKGENG-WMEVEMIKTWKRLDDQRLSKIDEQVLW 402
HGYG+ GW RR R++ A+ K G W V+ IKTWKRLDD+ S ID Q+LW
Sbjct: 329 HGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKNHSLIDTQLLW 381
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q05924|DCR2_YEAST Phosphatase DCR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 170/344 (49%), Gaps = 44/344 (12%)
Query: 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDN 118
+G FKI+Q+AD+H G+G+ + C D +D T F++++++ EKP + FTGD
Sbjct: 245 EGKFKIVQLADLHLGVGE-SECIDEYPKHEACKADPKTETFVQQVLDIEKPQLVVFTGDQ 303
Query: 119 IFGSSTTDVAES-MIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQV 177
I G + +E+ +++A P + +PWA V GNHD E ++ R +L S++ YS+ +
Sbjct: 304 IMGDRSIQDSETVLLKAVAPVIARKIPWAMVWGNHDDEGSLTRWQLSEIASVLPYSLFKF 363
Query: 178 NPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVR 237
+P + G + +I F N D V P G+ L+FLDS TV +
Sbjct: 364 SPHDTHDNTFGVGNYIYQI--FSNNDTEV--PVGT---------LYFLDSHKYSTVGKIY 410
Query: 238 T-YGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQN---- 292
Y +IKESQ +++ D N K L +AFFHIP+PE + +
Sbjct: 411 PGYDWIKESQWKYIE--------DYHDVNLKFKTGL-SMAFFHIPLPEYLNIESKTHPGE 461
Query: 293 ---IVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFC----GNLNGIWFCYG 345
++G ++E V + NS + TL L + V GHDH ND+C N IW CYG
Sbjct: 462 KNPLIGMYKEGVTAPKYNSEGITTLDRLS-VDVVSCGHDHCNDYCLRDDSTPNKIWLCYG 520
Query: 346 GGIGYHGYGKAGWPRRARIILAEAGKGENGWMEVEMIKTWKRLD 389
GG G GY G R RI + E EN I TWKRL+
Sbjct: 521 GGGGEGGYAGYGGTER-RIRIYEINVNENN------IHTWKRLN 557
|
Required for cell cycle progression. Has a role in the completion of START. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q9SR79|PPA16_ARATH Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 155/371 (41%), Gaps = 76/371 (20%)
Query: 54 LRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIA 113
LR R FKI AD+H+G + T T++ D+N+ + +++AE PDF+
Sbjct: 27 LRVREGSPFKIAIFADLHFG--------EDTWTDWGPGQDVNSVNVMSAVLDAETPDFVV 78
Query: 114 FTGDNIFGSSTTDVAESMI--QAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMD 171
+ GD + ++ S+ +A P + G+PWA + GNHD S F+ +D
Sbjct: 79 YLGDVVTANNIAIQNASLFWDKAISPTRDRGIPWATLFGNHDDAS---------FVWPLD 129
Query: 172 YSVAQVNPPAEDPSNLAKGG-----------VMEKIDGFGNYDLRVYGPP---------- 210
+ + PP P+ G + E+I + P
Sbjct: 130 WLSSSGIPPLRCPAASDDDGCTFRGTTRVELIQEEIKSSNALSYSMISPKELWPSVSNYV 189
Query: 211 ----GSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNR 266
S + + L+FLDSG G I +Q+ W S L
Sbjct: 190 LLVESSDHSKPPVALLYFLDSG------GGSYPEVISNAQVEWFKTKSNTLNPY------ 237
Query: 267 KVGAQLPGLAFFHIPIPE----TPQLYY-QNIVGQF-QEAVACSRVNSGVLQTLVSLGDI 320
++P L F+HIP P+L+ + VG +E V +G+++ L + +
Sbjct: 238 ---LRIPELIFWHIPSKAYKKVAPRLWITKPCVGSINKEKVVAQEAENGMMRVLENRSSV 294
Query: 321 KAVFVGHDHTNDFCGNL-NGIWFCYGGGIGYHGYGKAGWPRRARIILAEAGKGENGWMEV 379
KAVFVGH+H D+C + +W C+ GY GYG WPR +RI+ E M
Sbjct: 295 KAVFVGHNHGLDWCCPYKDKLWLCFARHTGYGGYGN--WPRGSRIL-------EISEMPF 345
Query: 380 EMIKTWKRLDD 390
IKTW R++D
Sbjct: 346 R-IKTWIRMED 355
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|O59759|YJM5_SCHPO Uncharacterized protein C1020.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.05 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 152/335 (45%), Gaps = 55/335 (16%)
Query: 61 TFKILQVADMHYGMGKVTRCRDVTATEF-KYC-SDLNTTRFLKRIIEAEKPDFIAFTGDN 118
T KILQ++D+HY CRD E + C +D TT F+ +++ E+PDF+ TGD
Sbjct: 207 TIKILQLSDLHYSNSD-RPCRDPYPYETAEDCMADAKTTAFVNELLQLEEPDFVLLTGDL 265
Query: 119 IFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVN 178
I G ++ D S+++A P ++ +P+A GNHD + REEL +S + S+
Sbjct: 266 INGDTSRDARSSLMKAVSPFVDYNVPFAVNFGNHDDLGDLSREELAKILSQIPGSM---- 321
Query: 179 PPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDS-GDRETVRGVR 237
G++ + G GN+ L + ++ LD+ GD R
Sbjct: 322 ------------GLIGNVSGVGNFVLH----------SPRKFAIYVLDTKGDTSNRRLCP 359
Query: 238 TYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQF 297
Y I E QL WL S + K + + +A HIP+ E + +++VG F
Sbjct: 360 GYDAITEDQLEWL---SSKVADFKYEPIQ--------MAVLHIPLKEFCET--EDLVGAF 406
Query: 298 QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCG---NLNGIWFCYGGGIGYHGYG 354
+E + S + + L SL I GHDH NDFCG + N + GG G
Sbjct: 407 REPCSYSICDPNTAKALKSLR-IPLAIAGHDHVNDFCGIHPDYNTYFCFAGGAGFGGYGG 465
Query: 355 KAGWPRRARIILAEAGKGENGWMEVEMIKTWKRLD 389
G+ RRAR+ E E ++TWKRL+
Sbjct: 466 HGGYVRRARVF--ELDPVERA------VRTWKRLE 492
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q12212|SIA1_YEAST Protein SIA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 129/317 (40%), Gaps = 64/317 (20%)
Query: 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIF 120
+FKILQ+ D H+ +C D + T +++ T F+ R++ +E PD + TGD +
Sbjct: 309 SFKILQITDFHF------KCTDNSMT---VINEIKTVNFIDRVLASENPDLVVITGDLLD 359
Query: 121 GSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPP 180
+T D +++ P + +P+A LG D+ + ++ FI + Y+ V
Sbjct: 360 SHNTIDYQTCIMKVVQPMISNKIPYAISLGVSDESNLATSAQIRDFIRNLPYTFNNV--- 416
Query: 181 AEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYG 240
A + ++A +K L +++L R + T
Sbjct: 417 ASEEGHMAIEVSFKK-----------------KLTKNTLLE------------RDIDTED 447
Query: 241 YIKESQ-LRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQE 299
S+ L ++ + QD N +G GLAF + P+ E I+GQ+ E
Sbjct: 448 ETNPSEALFFVFDSFAPVNNFLQDYNDLIGKIDFGLAFQYFPLSEYRPHGLFPIIGQYNE 507
Query: 300 ----AVACSRVNSGVLQT-----------LVSLGDIKAVFVGHDHTNDFC-GNLNGIWFC 343
V R V T ++SL +IK V GH+H ND C + N +W C
Sbjct: 508 RSTLTVDTPRSRGQVSMTINGKHYKSFLDILSLWNIKGVSCGHEHNNDCCLQSKNEMWLC 567
Query: 344 YGGGIGYHGYGKAGWPR 360
YGG G G PR
Sbjct: 568 YGGSAG------IGLPR 578
|
Involved in the activation of the plasma membrane proton-ATPase (PMA1) by glucose. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|Q6CPQ2|SIA1_KLULA Protein SIA1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SIA1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 145/354 (40%), Gaps = 73/354 (20%)
Query: 62 FKILQVADMHYGMGKVTRCR-DVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIF 120
FKILQ++D+H+G V+ R + + F+Y D +F+ +I E+PD TG +IF
Sbjct: 278 FKILQISDLHFGRHIVSDSRKEKPDSIFRY--DWPNVQFIHSVIRNERPDLAVITG-HIF 334
Query: 121 G--SSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVN 178
+ D +++ P + G+P+ G Q +T + ++ FI + + + + +
Sbjct: 335 KDFNKNLDYESQILKMVSPIISNGIPFLFTWG-EPQVTTEFKVNILNFIKSLPFCLNKFD 393
Query: 179 PPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRT 238
++ + L L + P + + I +F DS E+
Sbjct: 394 --LKNSTYLM---------------LPLLLPAKTPGSQKQIGTIFAFDSNVTES------ 430
Query: 239 YGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPE-TPQLYYQNIVGQF 297
Y ++ D + + LAF H+P+ E PQ + ++G +
Sbjct: 431 YNFL--------------------DKFPRSPQSVYNLAFQHLPLHEYRPQGSFA-LIGNY 469
Query: 298 QEAVACSRV-NSGVLQTLVSLGDIKAVFVGHDHTNDFC-------GNL-NGIWFCYGGGI 348
++ + + ++ + L+ DIKA+ GH+H ND C NL N +W CYGG
Sbjct: 470 EQKGSLDYIPHTKAFRNLLGEKDIKAISCGHEHGNDCCVLSDGKQQNLKNNMWLCYGGVT 529
Query: 349 GYHGYGKAGWPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLW 402
GY + + RI + K + I +WKR D Q +W
Sbjct: 530 GY----DQAYESKVRIFKIDTEKND--------ITSWKRSIKDTSKVSDYQYIW 571
|
May be involved in the activation of the plasma membrane proton-ATPase by glucose. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 408 | ||||||
| 356530342 | 404 | PREDICTED: probable inactive purple acid | 0.963 | 0.972 | 0.721 | 1e-164 | |
| 297793233 | 400 | ATPAP28/PAP28 [Arabidopsis lyrata subsp. | 0.968 | 0.987 | 0.675 | 1e-163 | |
| 224090511 | 395 | predicted protein [Populus trichocarpa] | 0.948 | 0.979 | 0.718 | 1e-160 | |
| 356558322 | 403 | PREDICTED: probable inactive purple acid | 0.960 | 0.972 | 0.698 | 1e-159 | |
| 15242042 | 397 | purple acid phosphatase 28 [Arabidopsis | 0.950 | 0.977 | 0.647 | 1e-154 | |
| 255554410 | 409 | Phosphatase DCR2, putative [Ricinus comm | 0.965 | 0.963 | 0.703 | 1e-154 | |
| 357449611 | 422 | hypothetical protein MTR_2g038080 [Medic | 0.973 | 0.940 | 0.671 | 1e-153 | |
| 225445929 | 401 | PREDICTED: probable inactive purple acid | 0.958 | 0.975 | 0.676 | 1e-150 | |
| 449466987 | 408 | PREDICTED: probable inactive purple acid | 0.973 | 0.973 | 0.660 | 1e-148 | |
| 225445931 | 391 | PREDICTED: probable inactive purple acid | 0.946 | 0.987 | 0.670 | 1e-146 |
| >gi|356530342|ref|XP_003533741.1| PREDICTED: probable inactive purple acid phosphatase 28-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 287/398 (72%), Positives = 327/398 (82%), Gaps = 5/398 (1%)
Query: 11 NWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADM 70
NWKHSLLYIT + AI+ KL ++ + +KK PDLPLRFR DGTFKILQVADM
Sbjct: 5 NWKHSLLYITFLLAILHLTQNHFCHKLFFANQTVRVKKNPDLPLRFRSDGTFKILQVADM 64
Query: 71 HYGMG-KVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAE 129
HYG G VTRCRDV A+EF++CSDLNTTRFLKRII AE PDF+AFTGDNIFGSS+ D AE
Sbjct: 65 HYGTGTSVTRCRDVLASEFEFCSDLNTTRFLKRIILAENPDFLAFTGDNIFGSSSPDAAE 124
Query: 130 SMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAK 189
S+ +AFGP ME GLPWAAVLGNHDQESTMDREELM ISLMDYSV+Q+NP +D N +K
Sbjct: 125 SLFRAFGPVMESGLPWAAVLGNHDQESTMDREELMSLISLMDYSVSQINPSDDDLINPSK 184
Query: 190 GGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRW 249
GGVM KIDGFGNY+LRVYG PGS LANS++LNLFFLDSGDR +G+RTYG+IKESQL W
Sbjct: 185 GGVMTKIDGFGNYNLRVYGAPGSMLANSTVLNLFFLDSGDRSVYQGIRTYGWIKESQLNW 244
Query: 250 LHRVSEALQGQKQDSNRKVGA----QLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSR 305
L RVS QGQK+D A + P LAFFHIPIPE P L+Y+ I+GQFQEAVACSR
Sbjct: 245 LRRVSHEFQGQKRDPLHPTDAISTMKPPALAFFHIPIPEIPHLFYKEIIGQFQEAVACSR 304
Query: 306 VNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARII 365
VNSGVLQ VS+GD+KAVF+GHDHTNDFCGNL+GIWFCYGGG GYHGYGKAGWPRRARII
Sbjct: 305 VNSGVLQAFVSMGDVKAVFIGHDHTNDFCGNLDGIWFCYGGGFGYHGYGKAGWPRRARII 364
Query: 366 LAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWE 403
LAE KG+ WM+V+ I TWKRLDD+++SKIDEQ+LW+
Sbjct: 365 LAELQKGKKSWMDVQRIMTWKRLDDEKMSKIDEQILWQ 402
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297793233|ref|XP_002864501.1| ATPAP28/PAP28 [Arabidopsis lyrata subsp. lyrata] gi|297310336|gb|EFH40760.1| ATPAP28/PAP28 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/401 (67%), Positives = 323/401 (80%), Gaps = 6/401 (1%)
Query: 7 SAKWNWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQ 66
S+ NWKH++LY+TLI ++++F++ I KL I+H+KIHLK+ P+LPLRFR DGTFKILQ
Sbjct: 3 SSMGNWKHTVLYLTLIISLVYFIESLISHKLHINHNKIHLKRSPNLPLRFRDDGTFKILQ 62
Query: 67 VADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD 126
VADMH+GMG +TRCRDV +EF+YCSDLNTTRF++R+IEAE+PD IAFTGDNIFGSSTTD
Sbjct: 63 VADMHFGMGIITRCRDVLDSEFEYCSDLNTTRFIRRMIEAERPDLIAFTGDNIFGSSTTD 122
Query: 127 VAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSN 186
AES+IQA G A+E G+PWAA+LGNHDQEST++REELM F+SLMD+SV+QVNPP ED SN
Sbjct: 123 AAESLIQAIGLAIEYGIPWAAILGNHDQESTLNREELMTFLSLMDFSVSQVNPPVEDDSN 182
Query: 187 LAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQ 246
KGG M IDGFGNY LRVYG PGS LANS++ +LFF DSGDRE V+G RTYG+IKESQ
Sbjct: 183 QIKGGAMRLIDGFGNYRLRVYGAPGSVLANSTVFDLFFFDSGDREIVQGKRTYGWIKESQ 242
Query: 247 LRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRV 306
LRWL S KQ N+++ P LAFFHIPI E L+Y +GQFQE VACS V
Sbjct: 243 LRWLQDTS------KQVHNQRIIGNPPALAFFHIPILEVRDLWYTPFIGQFQEGVACSIV 296
Query: 307 NSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIIL 366
SGVLQT VS+G++KA F+GHDH NDFCGNL GIWFCYGGG GYH YG+ W RRAR+I
Sbjct: 297 QSGVLQTFVSMGNVKAAFMGHDHVNDFCGNLKGIWFCYGGGFGYHAYGRPNWHRRARVIE 356
Query: 367 AEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPS 407
A+ GKG + W +++IKTWKRLDDQ LSKIDEQVLWE S
Sbjct: 357 AKLGKGRDTWTGIQLIKTWKRLDDQDLSKIDEQVLWETSDS 397
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224090511|ref|XP_002309007.1| predicted protein [Populus trichocarpa] gi|222854983|gb|EEE92530.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 283/394 (71%), Positives = 323/394 (81%), Gaps = 7/394 (1%)
Query: 14 HSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADMHYG 73
+SLLY+TL++ I+F + QI KL + H +HLKK P LPLRF DGTFKILQVADMHYG
Sbjct: 5 YSLLYLTLVFTILFTLHTQIAHKLLVGHHPLHLKKSPHLPLRFNSDGTFKILQVADMHYG 64
Query: 74 MGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQ 133
G +TRCRDV A+EF YCSDLNTTRFLKRII++EKPDFIAFTGDNIFG ST D AES+++
Sbjct: 65 TGMLTRCRDVLASEFDYCSDLNTTRFLKRIIQSEKPDFIAFTGDNIFGPSTHDAAESLLR 124
Query: 134 AFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVM 193
AFGPAM+ GLPWAAVLGNHDQESTM REELM FISLMDYSV+Q N P +D S+ A+G V
Sbjct: 125 AFGPAMDSGLPWAAVLGNHDQESTMTREELMSFISLMDYSVSQTNQPVDDLSSAAEGDVT 184
Query: 194 EKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRV 253
+ IDGFGNY+LRVYG PGSHLAN S+LNLFFLDSGDRE V+G+RTYG+IKESQLRWL V
Sbjct: 185 KNIDGFGNYNLRVYGAPGSHLANRSVLNLFFLDSGDREVVQGIRTYGWIKESQLRWLRSV 244
Query: 254 SEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQT 313
S+ Q V A P + FFHIPIPE QLY Q IVG+FQ+ V+CS +NSGVLQT
Sbjct: 245 SKGYQA-------SVCAIPPAMVFFHIPIPEIQQLYNQQIVGKFQQRVSCSSMNSGVLQT 297
Query: 314 LVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEAGKGE 373
++S+G +KAVFVGHDHTNDFCGNL GIWFCYGGG GYHGYGKAGWPRRARIILAE KGE
Sbjct: 298 IISMGVVKAVFVGHDHTNDFCGNLEGIWFCYGGGFGYHGYGKAGWPRRARIILAELEKGE 357
Query: 374 NGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPS 407
WM VE I TWKRLDD++LSK+DEQVLW+ PS
Sbjct: 358 KSWMGVERISTWKRLDDEKLSKLDEQVLWQSHPS 391
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356558322|ref|XP_003547456.1| PREDICTED: probable inactive purple acid phosphatase 28-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/398 (69%), Positives = 324/398 (81%), Gaps = 6/398 (1%)
Query: 11 NWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADM 70
NWKHSLLY+ + AI+ KL + ++ + +KK PDLPLRFR DGTFKILQVADM
Sbjct: 5 NWKHSLLYLIFLLAILHLTQNYFSHKLFLDNETVRIKKNPDLPLRFRSDGTFKILQVADM 64
Query: 71 HYGMGK-VTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAE 129
HY G VTRC+DV A+EF++CSDLNTT+FLK II AE PDF+AFTGDNIFGSS+ D AE
Sbjct: 65 HYDSGTIVTRCKDVLASEFEFCSDLNTTQFLKHIIRAENPDFVAFTGDNIFGSSSPDAAE 124
Query: 130 SMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAK 189
S+ +AFGPAME GLPWAAVLGNHDQESTM REELM ISLMDYSV+Q+NP +D +N +K
Sbjct: 125 SLFRAFGPAMESGLPWAAVLGNHDQESTMSREELMSLISLMDYSVSQINPLDDDLTNSSK 184
Query: 190 GGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRW 249
GG+M KIDGFGNY+LRVYG PGS +ANS++LNLFFLDSGDR +G+RTYG+I+ESQL W
Sbjct: 185 GGMMTKIDGFGNYNLRVYGAPGSMVANSTVLNLFFLDSGDRAVYQGIRTYGWIRESQLNW 244
Query: 250 LHRVSEALQGQKQDSNRKVGA----QLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSR 305
L RVS+ QGQKQD A + P LAFFHIPIPE PQL+Y I+GQFQEAVACSR
Sbjct: 245 LRRVSQKFQGQKQDPLHPTDAISTTKPPALAFFHIPIPEIPQLFYNEIIGQFQEAVACSR 304
Query: 306 VNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARII 365
VNSGV QT VS+GD+KAVF+GHDHTNDFCGNL+GIWFCYGGG GYHGYGKA WPRRARII
Sbjct: 305 VNSGVFQTFVSMGDVKAVFIGHDHTNDFCGNLDGIWFCYGGGFGYHGYGKAEWPRRARII 364
Query: 366 LAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWE 403
LAE G+ WM V+ I TWKRLDD+++SKIDEQ+LW+
Sbjct: 365 LAEQN-GKKSWMNVQRIMTWKRLDDEKMSKIDEQILWQ 401
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15242042|ref|NP_200524.1| purple acid phosphatase 28 [Arabidopsis thaliana] gi|75264242|sp|Q9LU72.1|PPA28_ARATH RecName: Full=Probable inactive purple acid phosphatase 28; Flags: Precursor gi|8843816|dbj|BAA97364.1| unnamed protein product [Arabidopsis thaliana] gi|22531084|gb|AAM97046.1| putative protein [Arabidopsis thaliana] gi|25083815|gb|AAN72121.1| putative protein [Arabidopsis thaliana] gi|58618187|gb|AAW80660.1| putative purple acid phosphatase [Arabidopsis thaliana] gi|332009469|gb|AED96852.1| purple acid phosphatase 28 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 257/397 (64%), Positives = 316/397 (79%), Gaps = 9/397 (2%)
Query: 11 NWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADM 70
NWKH++LY+TLI ++++F++ I KL I+++KI LK+ P+LPLRFR DGTFKILQVADM
Sbjct: 7 NWKHTVLYLTLIVSLLYFIESLISHKLHINYNKIRLKRSPNLPLRFRDDGTFKILQVADM 66
Query: 71 HYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAES 130
H+GMG +TRCRDV +EF+YCSDLNTTRFL+R+IE+E+PD IAFTGDNIFGSSTTD AES
Sbjct: 67 HFGMGMITRCRDVLDSEFEYCSDLNTTRFLRRMIESERPDLIAFTGDNIFGSSTTDAAES 126
Query: 131 MIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKG 190
+++A GPA+E G+PWAAVLGNHD EST++R ELM F+SLMD+SV+Q+NP ED + KG
Sbjct: 127 LLEAIGPAIEYGIPWAAVLGNHDHESTLNRLELMTFLSLMDFSVSQINPLVEDET---KG 183
Query: 191 GVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWL 250
M IDGFGNY +RVYG PGS LANS++ +LFF DSGDRE V+G RTYG+IKESQLRWL
Sbjct: 184 DTMRLIDGFGNYRVRVYGAPGSVLANSTVFDLFFFDSGDREIVQGKRTYGWIKESQLRWL 243
Query: 251 HRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGV 310
S +QG Q ++ P LAFFHIPI E +L+Y +GQFQE VACS V SGV
Sbjct: 244 QDTS--IQGHSQ----RIHVNPPALAFFHIPILEVRELWYTPFIGQFQEGVACSIVQSGV 297
Query: 311 LQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEAG 370
LQT VS+G++KA F+GHDH NDFCG L G+WFCYGGG GYH YG+ W RRAR+I A+ G
Sbjct: 298 LQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLG 357
Query: 371 KGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPS 407
KG + W +++IKTWKRLDD+ LSKIDEQVLWE S
Sbjct: 358 KGRDTWEGIKLIKTWKRLDDEYLSKIDEQVLWETSDS 394
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554410|ref|XP_002518244.1| Phosphatase DCR2, putative [Ricinus communis] gi|223542591|gb|EEF44130.1| Phosphatase DCR2, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/398 (70%), Positives = 324/398 (81%), Gaps = 4/398 (1%)
Query: 15 SLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADMHYGM 74
S LY+ +I+ IIF I KL I H K +K+ LPLRFR DG FKILQVADMHYG
Sbjct: 12 SFLYLAIIFIIIFTFHTHIAVKLIIGHHKPRVKRSSILPLRFRADGNFKILQVADMHYGT 71
Query: 75 GKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQA 134
G +TRCRDV +EF +CSD+NTTRFL+R+I++E+PDFIAFTGDNIFG+ST+D AES+++A
Sbjct: 72 GSLTRCRDVLPSEFDFCSDVNTTRFLQRMIQSEQPDFIAFTGDNIFGTSTSDAAESLLRA 131
Query: 135 FGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVME 194
FGPAME LPWAA+LGNHD ESTM RE+LM FISLMDYSV+Q+NP A D S+ KG +M
Sbjct: 132 FGPAMESELPWAAILGNHDHESTMTREDLMSFISLMDYSVSQINPSAGDLSDSGKGSMMV 191
Query: 195 KIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVS 254
IDGFGNYDL+VYGPPGS LAN S+LNLFFLDSG RE V+G+RTYG+I+ESQLRWL VS
Sbjct: 192 DIDGFGNYDLKVYGPPGSPLANHSVLNLFFLDSGSREVVQGIRTYGWIRESQLRWLRGVS 251
Query: 255 EALQGQKQDSNRKV----GAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGV 310
+ QG+ QD N A P LAFFHIPIPE PQLYYQ IVG FQEAVACS VNSGV
Sbjct: 252 KGYQGKNQDFNHLAEASHSAAPPSLAFFHIPIPEIPQLYYQKIVGIFQEAVACSSVNSGV 311
Query: 311 LQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEAG 370
LQTLVS+GD+KAVF GHDH NDFCGNL+GIWFCYGGG GYHGYGKAGW RRAR+I+AE G
Sbjct: 312 LQTLVSMGDVKAVFFGHDHKNDFCGNLSGIWFCYGGGFGYHGYGKAGWARRARVIVAELG 371
Query: 371 KGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPSR 408
KG+N WM V+ I+TWKRLDD++LSKIDEQVLWE+ SR
Sbjct: 372 KGDNSWMGVKRIRTWKRLDDEKLSKIDEQVLWELERSR 409
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357449611|ref|XP_003595082.1| hypothetical protein MTR_2g038080 [Medicago truncatula] gi|355484130|gb|AES65333.1| hypothetical protein MTR_2g038080 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/411 (67%), Positives = 325/411 (79%), Gaps = 14/411 (3%)
Query: 11 NWKHSLLYITLIYAIIFFVDK-QILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVAD 69
NWKHSLLY+T I +I+ + +KL I + + +KK P LPLRFR DGTFKILQVAD
Sbjct: 13 NWKHSLLYLTFIISILHLTHQTNFSRKLLIGNQTVRIKKTPQLPLRFRSDGTFKILQVAD 72
Query: 70 MHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFT-------GDNIFGS 122
MH+G G +T+CRDV A+EF++CSDLNTT FLKR+I+ E PDFIAFT GDNIFG
Sbjct: 73 MHFGNG-ITKCRDVLASEFEFCSDLNTTLFLKRVIQDETPDFIAFTVDGAECSGDNIFGP 131
Query: 123 STTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAE 182
S+ D AESM +AFGPAME GLPWAA+LGNHDQEST++REELM ISLMDYSV+Q+NP A+
Sbjct: 132 SSHDAAESMFKAFGPAMESGLPWAAILGNHDQESTLNREELMSLISLMDYSVSQINPSAD 191
Query: 183 DPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYI 242
+N AKG M KIDGFGNY+LRVYG PGS +ANSS+LNLFFLDSGDR +G+RTY +I
Sbjct: 192 SLTNSAKGHKMSKIDGFGNYNLRVYGAPGSMMANSSVLNLFFLDSGDRVVYQGIRTYDWI 251
Query: 243 KESQLRWLHRVSEALQGQKQD---SNRKVGAQL--PGLAFFHIPIPETPQLYYQNIVGQF 297
K+SQL WL VS+ Q Q+QD S V + + P LAFFHIPIPE QL+Y+ IVGQF
Sbjct: 252 KDSQLHWLRHVSQEPQAQEQDPLHSTDHVTSPITPPALAFFHIPIPEVRQLFYKQIVGQF 311
Query: 298 QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAG 357
QE VACSRVNS VLQT VS+GD+KAVF+GHDHTNDFCGNL+GIWFCYGGG GYHGYGKAG
Sbjct: 312 QEGVACSRVNSAVLQTFVSMGDVKAVFIGHDHTNDFCGNLDGIWFCYGGGFGYHGYGKAG 371
Query: 358 WPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPSR 408
WPRRARIILAE KG+ W V+ I TWKRLDD+++SKIDEQ+LW+ SR
Sbjct: 372 WPRRARIILAELQKGKESWTSVQKIMTWKRLDDEKMSKIDEQILWDHLHSR 422
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225445929|ref|XP_002263616.1| PREDICTED: probable inactive purple acid phosphatase 28 isoform 2 [Vitis vinifera] gi|297735467|emb|CBI17907.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 272/402 (67%), Positives = 319/402 (79%), Gaps = 11/402 (2%)
Query: 11 NWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADM 70
N +++ LY+T ++AII+ + I KL + I LK+ P LPLRF DG FKILQVADM
Sbjct: 5 NIRYTFLYLTFVFAIIYLLQTLISHKLILGRQPITLKQNPHLPLRFSSDGIFKILQVADM 64
Query: 71 HYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAES 130
H+G G VTRCRDV +E CSDLNTTRFL+R+I+ E+PDF+AFTGDNIFG+S D AES
Sbjct: 65 HFGNGVVTRCRDVLPSELDGCSDLNTTRFLRRLIDEERPDFVAFTGDNIFGTSAADAAES 124
Query: 131 MIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKG 190
+ + FGP ME LPWAA+LGNHDQESTM REELM ISLMDYSV+Q+NP AEDPS+ A
Sbjct: 125 LFEVFGPVMESRLPWAAILGNHDQESTMTREELMTLISLMDYSVSQINP-AEDPSSPAV- 182
Query: 191 GVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWL 250
IDGFGNY LRV G PGSHLANSSIL+L+FLDSGDR TV G RTYG+IKESQLRWL
Sbjct: 183 ----DIDGFGNYYLRVNGAPGSHLANSSILSLYFLDSGDRATVNGRRTYGWIKESQLRWL 238
Query: 251 HRVSEALQGQKQDSNRKVG-----AQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSR 305
VS+ +GQK+DS + A+ P LAFFHIP+PE QLY++ IVGQFQEAVACS
Sbjct: 239 RGVSQGFEGQKRDSKQSADLILPPAETPALAFFHIPVPEVRQLYFKEIVGQFQEAVACSA 298
Query: 306 VNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARII 365
VNSGVLQT VS+GD+KAVF+GHDHTNDFCGNL+GIWFCYGGG GYHGYG+AGWPRRARII
Sbjct: 299 VNSGVLQTFVSMGDVKAVFMGHDHTNDFCGNLDGIWFCYGGGCGYHGYGRAGWPRRARII 358
Query: 366 LAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPS 407
LAE GKGE W V+ I+TWKRLDD+++SKIDEQVLW++ S
Sbjct: 359 LAELGKGERAWTGVKRIRTWKRLDDEKMSKIDEQVLWDLNSS 400
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449466987|ref|XP_004151207.1| PREDICTED: probable inactive purple acid phosphatase 28-like [Cucumis sativus] gi|449502979|ref|XP_004161796.1| PREDICTED: probable inactive purple acid phosphatase 28-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/406 (66%), Positives = 314/406 (77%), Gaps = 9/406 (2%)
Query: 3 MESISAKWNWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTF 62
ME ++ KW K S+LY+ IY+IIF + I KL + + +H+KK PDLPLRFR DGTF
Sbjct: 1 MEFVAEKW--KFSILYLGFIYSIIFLLHSLISHKLLLGYQAVHIKKNPDLPLRFRSDGTF 58
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGS 122
KILQVADMH+G G TRCRDV EF++CSDLNTTRF KR+IEAE PDFIAFTGDNIFG
Sbjct: 59 KILQVADMHFGNGVNTRCRDVLDIEFEHCSDLNTTRFFKRMIEAENPDFIAFTGDNIFGP 118
Query: 123 STTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAE 182
ST D AES+ +AF PA+E +PWAAVLGNHDQESTM REELM ISLMDYSV+Q NP
Sbjct: 119 STADAAESLFKAFRPAIEHQVPWAAVLGNHDQESTMTREELMSLISLMDYSVSQTNPSTN 178
Query: 183 D-PSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGY 241
+ PSN ++ IDGFGNYD+ VYG PGSHLANSS+LNL+FLDSGD+ V+G RTYG+
Sbjct: 179 NLPSN--GNQMIRNIDGFGNYDINVYGAPGSHLANSSVLNLYFLDSGDKAVVQGARTYGW 236
Query: 242 IKESQLRWLHRVSEALQGQKQDSNRKVGAQLPG----LAFFHIPIPETPQLYYQNIVGQF 297
IKESQL+WL VS+ QG Q+ + A G L FFHIPIPE LYY+ IVGQF
Sbjct: 237 IKESQLKWLRDVSQRYQGTNQERFPSMDALAQGKPLALTFFHIPIPEIWNLYYKKIVGQF 296
Query: 298 QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAG 357
QE VACS VNSGVLQ LV++GD+KAVF+GHDHTNDFCGNL+GIWFCYGGG GYHGYG+ G
Sbjct: 297 QEGVACSSVNSGVLQNLVAMGDVKAVFIGHDHTNDFCGNLDGIWFCYGGGFGYHGYGRLG 356
Query: 358 WPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWE 403
W RR R+I+AE G + WM VE I+TWKRLDD+ L+KIDEQ+LWE
Sbjct: 357 WSRRGRVIVAELGNNKKSWMGVERIRTWKRLDDEELTKIDEQILWE 402
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225445931|ref|XP_002263585.1| PREDICTED: probable inactive purple acid phosphatase 28 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/397 (67%), Positives = 313/397 (78%), Gaps = 11/397 (2%)
Query: 11 NWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADM 70
N +++ LY+T ++AII+ + I KL + I LK+ P LPLRF DG FKILQVADM
Sbjct: 5 NIRYTFLYLTFVFAIIYLLQTLISHKLILGRQPITLKQNPHLPLRFSSDGIFKILQVADM 64
Query: 71 HYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAES 130
H+G G VTRCRDV +E CSDLNTTRFL+R+I+ E+PDF+AFTGDNIFG+S D AES
Sbjct: 65 HFGNGVVTRCRDVLPSELDGCSDLNTTRFLRRLIDEERPDFVAFTGDNIFGTSAADAAES 124
Query: 131 MIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKG 190
+ + FGP ME LPWAA+LGNHDQESTM REELM ISLMDYSV+Q+NP AEDPS+ A
Sbjct: 125 LFEVFGPVMESRLPWAAILGNHDQESTMTREELMTLISLMDYSVSQINP-AEDPSSPAV- 182
Query: 191 GVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWL 250
IDGFGNY LRV G PGSHLANSSIL+L+FLDSGDR TV G RTYG+IKESQLRWL
Sbjct: 183 ----DIDGFGNYYLRVNGAPGSHLANSSILSLYFLDSGDRATVNGRRTYGWIKESQLRWL 238
Query: 251 HRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGV 310
VS+ + + ++ P LAFFHIP+PE QLY++ IVGQFQEAVACS VNSGV
Sbjct: 239 RGVSQGFEVYLTEQ-----SETPALAFFHIPVPEVRQLYFKEIVGQFQEAVACSAVNSGV 293
Query: 311 LQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEAG 370
LQT VS+GD+KAVF+GHDHTNDFCGNL+GIWFCYGGG GYHGYG+AGWPRRARIILAE G
Sbjct: 294 LQTFVSMGDVKAVFMGHDHTNDFCGNLDGIWFCYGGGCGYHGYGRAGWPRRARIILAELG 353
Query: 371 KGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPS 407
KGE W V+ I+TWKRLDD+++SKIDEQVLW++ S
Sbjct: 354 KGERAWTGVKRIRTWKRLDDEKMSKIDEQVLWDLNSS 390
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 408 | ||||||
| TAIR|locus:2175594 | 397 | PAP28 "AT5G57140" [Arabidopsis | 0.950 | 0.977 | 0.624 | 1.8e-135 | |
| TAIR|locus:2161937 | 389 | PAP29 "AT5G63140" [Arabidopsis | 0.823 | 0.863 | 0.471 | 3.2e-81 | |
| TAIR|locus:2041379 | 401 | PAP14 "AT2G46880" [Arabidopsis | 0.830 | 0.845 | 0.471 | 5.4e-79 | |
| CGD|CAL0002750 | 728 | orf19.843 [Candida albicans (t | 0.497 | 0.278 | 0.350 | 2.4e-45 | |
| SGD|S000004353 | 578 | DCR2 "Phosphoesterase involved | 0.654 | 0.461 | 0.301 | 1.3e-30 | |
| DICTYBASE|DDB_G0283451 | 404 | DDB_G0283451 "Phosphatase DCR2 | 0.325 | 0.329 | 0.346 | 4.4e-25 | |
| DICTYBASE|DDB_G0278297 | 400 | DDB_G0278297 "metallophosphoes | 0.620 | 0.632 | 0.296 | 7e-22 | |
| ASPGD|ASPL0000009456 | 548 | AN10446 [Emericella nidulans ( | 0.490 | 0.364 | 0.309 | 6.5e-20 | |
| DICTYBASE|DDB_G0274199 | 426 | DDB_G0274199 "putative metallo | 0.343 | 0.328 | 0.300 | 6.6e-20 | |
| TAIR|locus:2100058 | 367 | PAP16 "AT3G10150" [Arabidopsis | 0.752 | 0.836 | 0.253 | 5.6e-17 |
| TAIR|locus:2175594 PAP28 "AT5G57140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1327 (472.2 bits), Expect = 1.8e-135, P = 1.8e-135
Identities = 248/397 (62%), Positives = 306/397 (77%)
Query: 11 NWKHSLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADM 70
NWKH++LY+TLI ++++F++ I KL I+++KI LK+ P+LPLRFR DGTFKILQVADM
Sbjct: 7 NWKHTVLYLTLIVSLLYFIESLISHKLHINYNKIRLKRSPNLPLRFRDDGTFKILQVADM 66
Query: 71 HYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAES 130
H+GMG +TRCRDV +EF+YCSDLNTTRFL+R+IE+E+PD IAFTGDNIFGSSTTD AES
Sbjct: 67 HFGMGMITRCRDVLDSEFEYCSDLNTTRFLRRMIESERPDLIAFTGDNIFGSSTTDAAES 126
Query: 131 MIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKG 190
+++A GPA+E G+PWAAVLGNHD EST++R ELM F+SLMD+SV+Q+NP ED + KG
Sbjct: 127 LLEAIGPAIEYGIPWAAVLGNHDHESTLNRLELMTFLSLMDFSVSQINPLVEDET---KG 183
Query: 191 GVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWL 250
M IDGFGNY +RVYG PGS LANS++ +LFF DSGDRE V+G RTYG+IKESQLRWL
Sbjct: 184 DTMRLIDGFGNYRVRVYGAPGSVLANSTVFDLFFFDSGDREIVQGKRTYGWIKESQLRWL 243
Query: 251 HRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGV 310
S +QG Q ++ P LAFFHIPI E +L+Y +GQFQE VACS V SGV
Sbjct: 244 QDTS--IQGHSQ----RIHVNPPALAFFHIPILEVRELWYTPFIGQFQEGVACSIVQSGV 297
Query: 311 LQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCXXXXXXXXXXXXXXWPRRARIILAEAG 370
LQT VS+G++KA F+GHDH NDFCG L G+WFC W RRAR+I A+ G
Sbjct: 298 LQTFVSMGNVKAAFMGHDHVNDFCGTLKGVWFCYGGGFGYHAYGRPNWHRRARVIEAKLG 357
Query: 371 KGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCPS 407
KG + W +++IKTWKRLDD+ LSKIDEQVLWE S
Sbjct: 358 KGRDTWEGIKLIKTWKRLDDEYLSKIDEQVLWETSDS 394
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| TAIR|locus:2161937 PAP29 "AT5G63140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 167/354 (47%), Positives = 217/354 (61%)
Query: 54 LRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIA 113
LRF +G FKILQVADMH+ G T+C++V ++ +CSDLNTT F+ R+I AEKPD I
Sbjct: 39 LRFSVNGEFKILQVADMHFANGAKTQCQNVLPSQRAHCSDLNTTIFMSRVIAAEKPDLIV 98
Query: 114 FTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYS 173
FTGDNIFG D +S+ AF PA+ +PW A+LGNHDQEST R+++M I + +
Sbjct: 99 FTGDNIFGFDVKDALKSINAAFAPAIASKIPWVAILGNHDQESTFTRQQVMNHIVKLPNT 158
Query: 174 VAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETV 233
++QVNPP IDGFGNY+L+++G S L N S+LNL+FLDSGD +V
Sbjct: 159 LSQVNPPE----------AAHYIDGFGNYNLQIHGAADSKLQNKSVLNLYFLDSGDYSSV 208
Query: 234 RGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQ---LPGLAFFHIPIPETPQLYY 290
+ Y +IK SQ W R S+ L K++ N K Q PGLA+FHIP+PE
Sbjct: 209 PYMEGYDWIKTSQQFWFDRTSKRL---KREYNAKPNPQEGIAPGLAYFHIPLPEFLSFDS 265
Query: 291 QNIV-GQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCXXXXXX 349
+N G QE + + NSG TL++ GD+K+VFVGHDH NDFCG L G+ C
Sbjct: 266 KNATKGVRQEGTSAASTNSGFFTTLIARGDVKSVFVGHDHVNDFCGELKGLNLCYGGGFG 325
Query: 350 XXXXXXXXWPRRARIILAEAGKGENG-WMEVEMIKTWKRLDDQRLSKIDEQVLW 402
W RRAR+++ + K G W V+ IKTWKRLDD+ LS ID QVLW
Sbjct: 326 YHAYGKAGWERRARVVVVDLNKKRKGKWGAVKSIKTWKRLDDKHLSVIDSQVLW 379
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| TAIR|locus:2041379 PAP14 "AT2G46880" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 167/354 (47%), Positives = 216/354 (61%)
Query: 54 LRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIA 113
LRF DG FKILQV+DMHYG GK T+C DV+ EF YCSDLNTT FL+R I +EKPD I
Sbjct: 38 LRFNTDGRFKILQVSDMHYGFGKETQCSDVSPAEFPYCSDLNTTSFLQRTIASEKPDLIV 97
Query: 114 FTGDNIFG-SSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDY 172
F+GDN++G T+DVA+SM AF PA+E G+PW A+LGNHDQES M RE +M +I +
Sbjct: 98 FSGDNVYGLCETSDVAKSMDMAFAPAIESGIPWVAILGNHDQESDMTRETMMKYIMKLPN 157
Query: 173 SVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRET 232
S++QVNPP D + +IDGFGNY+L++ GP GS L SILNL+ LD G
Sbjct: 158 SLSQVNPP--D-------AWLYQIDGFGNYNLQIEGPFGSPLFFKSILNLYLLDGGSYTK 208
Query: 233 VRGVR-TYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQ 291
+ G Y ++K SQ W S+ L+ + + + PGL + HIP+PE L+ +
Sbjct: 209 LDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPGLVYLHIPMPEFA-LFNK 267
Query: 292 N--IVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCXXXXXX 349
+ + G QE+ +NSG LV G++K VF GHDH NDFC L+GI C
Sbjct: 268 STEMTGVRQESTCSPPINSGFFTKLVERGEVKGVFSGHDHVNDFCAELHGINLCYAGGAG 327
Query: 350 XXXXXXXXWPRRARIILAEAGKGENG-WMEVEMIKTWKRLDDQRLSKIDEQVLW 402
W RR R++ A+ K G W V+ IKTWKRLDD+ S ID Q+LW
Sbjct: 328 YHGYGQVGWARRVRVVEAQLEKTMYGRWGAVDTIKTWKRLDDKNHSLIDTQLLW 381
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| CGD|CAL0002750 orf19.843 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 269 (99.8 bits), Expect = 2.4e-45, Sum P(3) = 2.4e-45
Identities = 82/234 (35%), Positives = 119/234 (50%)
Query: 181 AEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDS-GDRETVRGVRTY 239
A+ P ++A G IDGFGNY + V G + ++ L+L+F+DS +T + Y
Sbjct: 504 ADMPYSVAAMGPAS-IDGFGNYVVTVQGKS----SKATALSLYFVDSHAYSKTPKVTPGY 558
Query: 240 GYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLP-GLAFFHIPIPETPQLYYQNIVGQFQ 298
+IKE+QL +L + +E++Q + RK ++P +AFFHIP+PE L Q +G+ +
Sbjct: 559 DWIKENQLIYLKQEAESIQNSVE-KYRKSN-KIPLAMAFFHIPLPEFRNLN-QPFIGENR 615
Query: 299 EAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFC----------GNLNGIWFCXXXXX 348
E V R NSG Q L +G + VGHDH ND+C G+ N +W C
Sbjct: 616 EGVTAPRYNSGARQVLSEIG-VSVASVGHDHCNDYCLQDTQQSSSPGD-NKMWLCFGGGA 673
Query: 349 XXXXXXXXX-WPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVL 401
+ RR R+ + KGE IKTWKR +D + IDEQVL
Sbjct: 674 GLGGYGGYNGYIRRMRVYELDTSKGE--------IKTWKRTEDNPGNIIDEQVL 719
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| SGD|S000004353 DCR2 "Phosphoesterase involved in downregulation of the UPR" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 318 (117.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 88/292 (30%), Positives = 144/292 (49%)
Query: 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYC-SDLNTTRFLKRIIEAEKPDFIAFTGD 117
+G FKI+Q+AD+H G+G+ + C D + + C +D T F++++++ EKP + FTGD
Sbjct: 245 EGKFKIVQLADLHLGVGE-SECID-EYPKHEACKADPKTETFVQQVLDIEKPQLVVFTGD 302
Query: 118 NIFGSSTTDVAES-MIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQ 176
I G + +E+ +++A P + +PWA V GNHD E ++ R +L S++ YS+ +
Sbjct: 303 QIMGDRSIQDSETVLLKAVAPVIARKIPWAMVWGNHDDEGSLTRWQLSEIASVLPYSLFK 362
Query: 177 VNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGV 236
+P + G + +I F N D V P G+ L+FLDS TV +
Sbjct: 363 FSPHDTHDNTFGVGNYIYQI--FSNNDTEV--PVGT---------LYFLDSHKYSTVGKI 409
Query: 237 RT-YGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVG 295
Y +IKESQ +++ + K + +P + +I P ++G
Sbjct: 410 YPGYDWIKESQWKYIEDYHDVNLKFKTGLSMAF-FHIPLPEYLNIESKTHPG-EKNPLIG 467
Query: 296 QFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFC----GNLNGIWFC 343
++E V + NS + TL L + V GHDH ND+C N IW C
Sbjct: 468 MYKEGVTAPKYNSEGITTLDRLS-VDVVSCGHDHCNDYCLRDDSTPNKIWLC 518
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| DICTYBASE|DDB_G0283451 DDB_G0283451 "Phosphatase DCR2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 214 (80.4 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 51/147 (34%), Positives = 73/147 (49%)
Query: 196 IDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSE 255
I G NY L + P +A L+F DSGD + +GV +G + Q+ W VS
Sbjct: 160 IRGATNYYLPITDPSSGEVATI----LYFFDSGD-DNCQGVEGWGCVYPDQIEWYRTVSM 214
Query: 256 ALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLY-YQNIVGQ-FQEAVACSRVNSGVLQT 313
L+ K G +P +AF HIPIPE ++ + + G + V C VN+G+
Sbjct: 215 GLR-------EKYGRVVPAIAFMHIPIPEYMDMWNFYPVNGSLYDTGVCCFSVNTGLFAA 267
Query: 314 LVSLGDIKAVFVGHDHTNDFCGNLNGI 340
+GDI ++ GHDH NDF G NG+
Sbjct: 268 FKEMGDIISMHCGHDHDNDFIGEYNGV 294
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| DICTYBASE|DDB_G0278297 DDB_G0278297 "metallophosphoesterase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 269 (99.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 83/280 (29%), Positives = 129/280 (46%)
Query: 93 DLNTTRFLKRIIEAE-KPDFIAFTGDNIFGSSTT-DVAESMIQAFGPAMELGLPWAAVLG 150
D+N+T + +II+ E D I FTGD I G++ +V++ A A +PWA G
Sbjct: 96 DINSTAVMNKIIDKEGNVDLILFTGDLITGNNINGNVSKYWENAINVAKTRNIPWAITFG 155
Query: 151 NHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPP 210
NHD S+ D ISL D + +L+K G + I G NY+L +YG
Sbjct: 156 NHDDLSSNDNGTRYDLISL-DIKLG----------SLSKLGPIS-IPGVSNYNLNIYGNE 203
Query: 211 GSHLANSSILNLFFLDSGDRET-VRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVG 269
+ ++ L+ DSGD E + R + Q E +Q + ++ +
Sbjct: 204 NDRILST----LWLFDSGDGENDCKNQRNREFGNGYQCNTFI-TKEQIQWYENETLKYEN 258
Query: 270 AQLP---GLAFFHIPIPETPQLYYQNIVGQFQ-EAVACSRVNSGVLQTLVSLGDIKAVFV 325
+LP G AFFHIP+ E ++ + F +++AC + N G+ + V +G I+ + V
Sbjct: 259 DKLPLWEG-AFFHIPLQEYMLVWNYGVCFGFNNDSIACQKTNEGLFKKFVEIGRIRMISV 317
Query: 326 GHDHTNDFCGNLNGIWFCXXXXXXXXXXXXXXWPRRARII 365
GH+H NDFC + I C W R AR+I
Sbjct: 318 GHNHGNDFCSIFDNIKMCYGRHSGYGGYGT--WERGARVI 355
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| ASPGD|ASPL0000009456 AN10446 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 259 (96.2 bits), Expect = 6.5e-20, P = 6.5e-20
Identities = 70/226 (30%), Positives = 115/226 (50%)
Query: 42 DKIHLKKYPDLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEF---KYC-SDLNTT 97
D + +KK P +P R +G FKI+Q+AD+H G + CRD E + C +D T
Sbjct: 201 DPLKIKK-P-VP-RINENGRFKIMQLADLHLSTG-LGHCRDPVPPELIPGQGCEADPRTL 256
Query: 98 RFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQEST 157
F++R+++ E+PD + +GD + G ++ D + ++ ++ +P+AA+ GNHD E
Sbjct: 257 DFIERLLDEEQPDLVILSGDQVNGETSRDAQSPLFKSVKLLVDRKIPYAAIFGNHDDEGN 316
Query: 158 MDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGS-HLAN 216
+DR + M + + YS++ P ED IDG GNY + V G + H A
Sbjct: 317 LDRHQSMAILEDLPYSLSSAGP--ED------------IDGVGNYIVEVLGRGNTDHSAL 362
Query: 217 SSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQ 262
+ L S D RG Y +IK +Q+RW ++ L+ + Q
Sbjct: 363 TLYLLDSHSYSPDERQFRG---YDWIKPNQIRWFKTTAQGLKAKHQ 405
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| DICTYBASE|DDB_G0274199 DDB_G0274199 "putative metallophosphoesterase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 175 (66.7 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 46/153 (30%), Positives = 73/153 (47%)
Query: 186 NLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKES 245
+L + + I G NY+L++Y S +SSI + F+ D ++G +
Sbjct: 168 SLTQENIDPTIPGITNYNLKIYS---SDDTSSSISSSIFIFDSDLPQCNESGSWGCVDAK 224
Query: 246 QLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIV-GQFQEAVACS 304
Q+ W + S+ + G G + +AF HIP E L+ +N+V G F + +C
Sbjct: 225 QVEWYEKESDQMGGGG-------GGNISSIAFVHIPPVEVIDLWNENVVKGDFGDKESCC 277
Query: 305 RVN--SGVLQTLVSLGDIKAVFVGHDHTNDFCG 335
S + T+V GDIK ++ GHDH NDF G
Sbjct: 278 YYTDESEFVSTMVRRGDIKGLYFGHDHKNDFHG 310
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| TAIR|locus:2100058 PAP16 "AT3G10150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 229 (85.7 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 91/359 (25%), Positives = 148/359 (41%)
Query: 54 LRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIA 113
LR R FKI AD+H+G + T T++ D+N+ + +++AE PDF+
Sbjct: 27 LRVREGSPFKIAIFADLHFG--------EDTWTDWGPGQDVNSVNVMSAVLDAETPDFVV 78
Query: 114 FTGDNIFGSSTTDVAESMI--QAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMD 171
+ GD + ++ S+ +A P + G+PWA + GNHD S F+ +D
Sbjct: 79 YLGDVVTANNIAIQNASLFWDKAISPTRDRGIPWATLFGNHDDAS---------FVWPLD 129
Query: 172 YSVAQVNPPAEDPSNLAKGG-----------VMEKIDGFGNYDLRVYGPPGSHLANSSIL 220
+ + PP P+ G + E+I + P L S
Sbjct: 130 WLSSSGIPPLRCPAASDDDGCTFRGTTRVELIQEEIKSSNALSYSMISP--KELWPSVSN 187
Query: 221 NLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEA-LQGQKQDSNR-KVGAQLPGLAFF 278
+ ++S D Y ++ + +S A ++ K SN ++P L F+
Sbjct: 188 YVLLVESSDHSKPPVALLY-FLDSGGGSYPEVISNAQVEWFKTKSNTLNPYLRIPELIFW 246
Query: 279 HIPIPE----TPQLYYQN-IVGQF-QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTND 332
HIP P+L+ VG +E V +G+++ L + +KAVFVGH+H D
Sbjct: 247 HIPSKAYKKVAPRLWITKPCVGSINKEKVVAQEAENGMMRVLENRSSVKAVFVGHNHGLD 306
Query: 333 FCGNLNG-IWFCXXXXXXXXXXXXXXWPRRARIILAEAGKGENGWMEVEMIKTWKRLDD 390
+C +W C WPR +RI+ E M IKTW R++D
Sbjct: 307 WCCPYKDKLWLCFARHTGYGGYGN--WPRGSRIL-------EISEMPFR-IKTWIRMED 355
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LU72 | PPA28_ARATH | No assigned EC number | 0.6473 | 0.9509 | 0.9773 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh1_pm.C_scaffold_8001354 | annotation not avaliable (400 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 408 | |||
| cd07383 | 199 | cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 p | 4e-42 | |
| cd07383 | 199 | cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 p | 9e-30 | |
| cd07385 | 223 | cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and re | 4e-09 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 1e-08 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 4e-06 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 4e-05 | |
| cd00840 | 223 | cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal m | 5e-05 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 6e-05 | |
| COG0420 | 390 | COG0420, SbcD, DNA repair exonuclease [DNA replica | 2e-04 | |
| cd07396 | 267 | cd07396, MPP_Nbla03831, Homo sapiens Nbla03831 and | 5e-04 | |
| COG1408 | 284 | COG1408, COG1408, Predicted phosphohydrolases [Gen | 6e-04 |
| >gnl|CDD|163626 cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-42
Identities = 55/118 (46%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 239 YGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQ--NIVGQ 296
Y +I+ SQ+ W S AL +K G +P LAFFHIP+PE +++ + G
Sbjct: 89 YDWIRPSQIEWFKETSAAL-------KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGI 141
Query: 297 FQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYG 354
E V C ++NSG+ + L+ GD+K VF GHDH NDFCG NGIW CYG G GY GYG
Sbjct: 142 NNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWLCYGRGTGYGGYG 199
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 199 |
| >gnl|CDD|163626 cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 9e-30
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
Query: 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNI 119
G FKILQ AD+H+G G+ T +DL T F++R+++AEKPD + TGD I
Sbjct: 1 GKFKILQFADLHFGEGEGTC--------EGCEADLKTVAFIERVLDAEKPDLVVLTGDLI 52
Query: 120 FGSSTTDVAESMI-QAFGPAMELGLPWAAVLGNHD 153
G +T D + S + +A P ++ +PWAA GNHD
Sbjct: 53 TGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 199 |
| >gnl|CDD|163628 cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 4e-09
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 25/98 (25%)
Query: 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE---AEKPDFIAFTGDN 118
+I ++D+H G + L+R++E A KPD + TGD
Sbjct: 2 LRIAHLSDLHLGP-------------------FVSRERLERLVEKINALKPDLVVLTGDL 42
Query: 119 IFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQES 156
+ GS DV E +++ ++ L AVLGNHD S
Sbjct: 43 VDGS--VDVLELLLELLKK-LKAPLGVYAVLGNHDYYS 77
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 223 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 54.0 bits (129), Expect = 1e-08
Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 19/118 (16%)
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGS 122
+IL + D+H G+ DL+ L ++ KPD + F GD +
Sbjct: 1 RILVIGDLHGGLD-----------------DLDLLLLLLELLGEPKPDLVLFLGDLV--D 41
Query: 123 STTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPP 180
E + F ++ P V GNHD +S + + Y + +
Sbjct: 42 RGPPSLEVLALLFALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVS 99
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 4e-06
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 90 YCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVL 149
+ + AEKPDF+ GD + + E + A + LG+P V
Sbjct: 8 GNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPE--EVLAAALALLLLLGIPVYVVP 65
Query: 150 GNHD 153
GNHD
Sbjct: 66 GNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 58/292 (19%), Positives = 94/292 (32%), Gaps = 104/292 (35%)
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-----EKPDFIAFTGD 117
+ Q++D+H V +T L+ ++ +PD + TGD
Sbjct: 1 LLAQISDLHLRADGEGALLGV-----------DTAASLEAVLAHINALHPRPDLVLVTGD 49
Query: 118 NIFGSSTTDVAE--------SMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISL 169
TD ++ A L +P + GNHD DR +
Sbjct: 50 ------LTDDGSPESYERLRELLAA------LPIPVYLLPGNHD-----DRAAM------ 86
Query: 170 MDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGD 229
+V PPA GF Y + + G L LDS
Sbjct: 87 --RAVFPELPPA---------------PGFVQYVVDLGG-----------WRLILLDS-- 116
Query: 230 RETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLY 289
+V G + G + +QL WL AL + ++ L + H P P
Sbjct: 117 --SVPG-QHGGELCAAQLDWL---EAALA---EAPDKPT---L--VFLHHPPFP------ 156
Query: 290 YQNIVGQFQEAVACSRVNSGVL-QTLVSLGDIKAVFVGHDHTNDFCGNLNGI 340
+ + +A+ N+ L L +++A+ GH H G+ GI
Sbjct: 157 ---VGIAWMDAIGLR--NAEALAAVLARHPNVRAILCGHVH-RPIDGSWGGI 202
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
| >gnl|CDD|163616 cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE---AEKPDFIAFTGDNI 119
+ L AD H G RD + + I+E EK DF+ GD +
Sbjct: 1 RFLHTADWHLGKPLKGLSRDRRREDQF--------EAFEEIVELAIEEKVDFVLIAGD-L 51
Query: 120 FGSST--TDVAESMIQAFGPAMELGLPWAAVLGNHD 153
F S+ + E +I+A E G+P + GNHD
Sbjct: 52 FDSNNPSPEALELLIEALRRLKEAGIPVFIIAGNHD 87
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 223 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 39/174 (22%), Positives = 56/174 (32%), Gaps = 40/174 (22%)
Query: 100 LKRIIEAEKPDFIAFTGDNIFGSSTTDVA----ESMIQAFGPAMELGLPWAAVLGNHDQE 155
+ ++ PDFI GDN + V E+ + A L +PW VLGNHD
Sbjct: 24 MAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNHD-- 81
Query: 156 STMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLA 215
Y + S AQ+ D + Y RV P S
Sbjct: 82 ---------YSG---NVS-AQI-----DYTKRPNS----PRWTMPAYYYRVSFPFPS--- 116
Query: 216 NSSILNLFFLDS------GDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQD 263
+ + + +D+ D G + E QL WL + L D
Sbjct: 117 SDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWL---EKTLAASTAD 167
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|223497 COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGS 122
KIL +D H G ++ + K L I + EK DF+ GD +F +
Sbjct: 2 KILHTSDWHLGSKQLNL--PSRLEDQKK-----AFDELLEIAKEEKVDFVLIAGD-LFDT 53
Query: 123 S--TTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMD 171
+ + + ++A + G+P + GNHD S + + ++ +
Sbjct: 54 NNPSPRALKLFLEALRRLKDAGIPVVVIAGNHDSPSRLSEASPLLLLNNLG 104
|
Length = 390 |
| >gnl|CDD|163639 cd07396, MPP_Nbla03831, Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 66/272 (24%), Positives = 93/272 (34%), Gaps = 60/272 (22%)
Query: 67 VADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA---EKPDFIAFTGDNIFGSS 123
+AD+ Y TR R N+ L+ +E E DF+ GD I G +
Sbjct: 6 IADIQYADEDDTRPRY----------YRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDN 55
Query: 124 T-----TDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVN 178
D +++ P VLGNHD RE L+ + L
Sbjct: 56 ARAEEALDAVLAILDRLK------GPVHHVLGNHDL-YNPSREYLLLYTLLGL------- 101
Query: 179 PPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRT 238
A S G +DG YD+ G P + + R V
Sbjct: 102 -GAPYYSFSPGGIRFIVLDG---YDISALGRPEDT-PKAENADDNSNLGLYLSEPRFVDW 156
Query: 239 YGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPI-PETPQLYYQNIVGQF 297
G I E QL+WL LQ + + KV + F H P+ PE+ ++
Sbjct: 157 NGGIGEEQLQWLRNE---LQ-EADANGEKV------IIFSHFPLHPEST--SPHGLLWNH 204
Query: 298 QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDH 329
+E VL L + G +KA GHDH
Sbjct: 205 EE----------VLSILRAYGCVKACISGHDH 226
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 267 |
| >gnl|CDD|224326 COG1408, COG1408, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 35/143 (24%), Positives = 50/143 (34%), Gaps = 24/143 (16%)
Query: 15 SLLYITLIYAIIFFVDKQILQKLQISHDKIHLKKYPDLPLRFRYDGTFKILQVADMHYGM 74
SLL I I +L+ + K+ + P LP + KI+Q++D+H
Sbjct: 2 SLLLGIAITVIALASYAHLLEPGWLRVVKLTILT-PKLPASLQ---GLKIVQLSDLHSLP 57
Query: 75 GKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQA 134
+ + L I E PD I TGD + G VA
Sbjct: 58 FREEK-----------------LALLIAIAN-ELPDLIVLTGDYVDGDRPPGVAAL-ALF 98
Query: 135 FGPAMELGLPWAAVLGNHDQEST 157
++ L AVLGNHD
Sbjct: 99 LAK-LKAPLGVFAVLGNHDYGVD 120
|
Length = 284 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 408 | |||
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 100.0 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.97 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.97 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.96 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.95 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 99.93 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.92 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.91 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.91 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.9 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.89 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.85 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.83 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 99.82 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.82 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.81 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.81 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.81 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.8 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.77 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.76 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.74 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.72 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.7 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.69 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.65 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.62 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.6 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.6 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.57 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.49 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.48 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 99.42 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 99.42 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.4 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.34 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 99.31 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.3 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.29 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.25 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.24 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.24 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.23 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.19 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 99.18 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.16 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 99.11 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 99.1 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.1 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 99.07 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 99.04 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 99.02 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.01 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.0 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.92 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.89 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.86 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.84 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.8 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 98.78 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.77 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.71 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.71 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.69 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.65 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 98.64 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.61 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.6 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.57 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.53 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.53 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.46 | |
| PHA02239 | 235 | putative protein phosphatase | 98.45 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.39 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.39 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 98.38 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 98.34 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.33 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.24 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 98.2 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.19 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.18 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 98.16 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 98.15 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 98.14 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.04 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 98.03 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.96 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 97.92 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.88 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.87 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 97.76 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.74 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.63 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.6 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.6 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.56 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.54 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.52 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.48 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 97.46 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.29 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.18 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.12 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.65 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.53 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 96.4 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 96.23 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 96.18 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 96.15 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 96.12 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 95.96 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 95.95 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 95.93 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 95.85 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 95.79 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 95.65 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 95.63 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 95.63 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.54 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.36 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 95.34 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 95.26 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.19 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 94.04 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 93.79 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 90.88 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 88.28 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 83.95 | |
| KOG3818 | 525 | consensus DNA polymerase epsilon, subunit B [Repli | 83.59 | |
| COG2949 | 235 | SanA Uncharacterized membrane protein [Function un | 82.62 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 82.35 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 81.44 |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-58 Score=418.38 Aligned_cols=334 Identities=55% Similarity=0.967 Sum_probs=293.5
Q ss_pred CCCCCccccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHH
Q 015367 49 YPDLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVA 128 (408)
Q Consensus 49 ~~~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~ 128 (408)
+..+++++..+++|||+|+||+|++.....+|+++.|.+..+|.|++|..++.++|+.++|||||+|||+|++....++.
T Consensus 41 ~~~~~lr~~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~ 120 (379)
T KOG1432|consen 41 NGRLKLRFREDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAA 120 (379)
T ss_pred CcceeeeecCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHH
Confidence 44567888889999999999999999988899999999999999999999999999999999999999999997777888
Q ss_pred HHHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeC
Q 015367 129 ESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYG 208 (408)
Q Consensus 129 ~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~ 208 (408)
..+.++++|.++.++||.+++||||....+++.+++++...+|++..+++|+.. ... .+.|.++|.+.+.+
T Consensus 121 ~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~~~v~p~dg--------~~~-~~~g~gnyn~~i~~ 191 (379)
T KOG1432|consen 121 TSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSLSQVNPPDG--------HMY-IIDGFGNYNLQIEG 191 (379)
T ss_pred HHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhcCCCccccCCCccc--------cee-eeecccceEEEecc
Confidence 899999999999999999999999999999999999999999999999988742 111 26788999999998
Q ss_pred CCCCCCCCcceeEEEEEeCCCCCCcC-CcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccc
Q 015367 209 PPGSHLANSSILNLFFLDSGDRETVR-GVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQ 287 (408)
Q Consensus 209 ~~~~~~~~~~~~~~i~LDS~~~~~~~-~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~ 287 (408)
..++.....+.+.+++||++.+...+ ...+|+++..+|+.||+.+..+-... +. .-...|-++|+|+|+.++..
T Consensus 192 ~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~----~~-~~~P~p~La~~HIP~~E~~~ 266 (379)
T KOG1432|consen 192 AIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEP----NS-KYNPQPGLAFFHIPLPEFLE 266 (379)
T ss_pred CCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcc----cC-ccCCCCceEEEEcccHHHhh
Confidence 88887777788999999999987776 45689999999999999987442210 00 01223899999999998876
Q ss_pred ccc-CCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCC-eEEEEeCCcCCCCCCCCCCCCceEEE
Q 015367 288 LYY-QNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNG-IWFCYGGGIGYHGYGKAGWPRRARII 365 (408)
Q Consensus 288 ~~~-~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~g-i~~~~~~~sg~~~~~~~~~~~g~rv~ 365 (408)
.+. ....|.++|++.++..++.++..|.+..+|++|||||+|.||||+...| +|+||+|++||++||..+|.|++||+
T Consensus 267 ~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~~~wlCygGgaGyggYg~~gw~Rr~Rv~ 346 (379)
T KOG1432|consen 267 LESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELKGELWLCYGGGAGYGGYGIGGWERRARVF 346 (379)
T ss_pred ccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceecccCCeEEEEecCCCccCCcCcCCcccceEEE
Confidence 664 4467889999999999999999999888999999999999999999999 99999999999999977899999999
Q ss_pred EEecCCCCCCccccceeEEEEEccCCCCCcccceeeecc
Q 015367 366 LAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEM 404 (408)
Q Consensus 366 ~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~~~ 404 (408)
|++..+ .+|+||+|++++..+++|+|.+|.-
T Consensus 347 e~d~~~--------~~IkTWKRl~d~~~~~~D~q~l~d~ 377 (379)
T KOG1432|consen 347 ELDLNK--------DRIKTWKRLDDKPLSVIDYQLLYDG 377 (379)
T ss_pred Eccccc--------cccceeeecCCCCcceeeeEEEecc
Confidence 999654 6799999999999999999999974
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=238.28 Aligned_cols=243 Identities=20% Similarity=0.222 Sum_probs=155.8
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCcccHHHHHHHHHhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIFGSSTTDVAESMIQAFGP 137 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~ 137 (408)
++|||+||||+|+.........+ ....+.++.+.+.+++. +||+||++||+++... .+.++.+.+.++
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~--------~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-~~~~~~~~~~l~- 82 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLG--------VNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-SEAYQHFAEGIA- 82 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceec--------cCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-HHHHHHHHHHHh-
Confidence 57999999999985432111000 01123345555555553 6999999999887543 445556655554
Q ss_pred hHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCc
Q 015367 138 AMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANS 217 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~ 217 (408)
+.+.|+|+|+||||.... +.+++... ... ..++.+ ..
T Consensus 83 --~l~~Pv~~v~GNHD~~~~-----~~~~~~~~-----~~~--------------------~~~~~~-~~---------- 119 (275)
T PRK11148 83 --PLRKPCVWLPGNHDFQPA-----MYSALQDA-----GIS--------------------PAKHVL-IG---------- 119 (275)
T ss_pred --hcCCcEEEeCCCCCChHH-----HHHHHhhc-----CCC--------------------ccceEE-ec----------
Confidence 347999999999998421 12211110 000 011111 11
Q ss_pred ceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccc
Q 015367 218 SILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQF 297 (408)
Q Consensus 218 ~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~ 297 (408)
..+++++|||.... . ..|.++++|++||+++|++. +.++++||+||||......+.+...
T Consensus 120 ~~~~~i~Lds~~~g----~-~~G~l~~~ql~wL~~~L~~~------------~~~~~vv~~hH~P~~~~~~~~d~~~--- 179 (275)
T PRK11148 120 EHWQILLLDSQVFG----V-PHGELSEYQLEWLERKLADA------------PERHTLVLLHHHPLPAGCAWLDQHS--- 179 (275)
T ss_pred CCEEEEEecCCCCC----C-cCCEeCHHHHHHHHHHHhhC------------CCCCeEEEEcCCCCCCCcchhhccC---
Confidence 23679999996432 1 46889999999999998775 3467788888866543333322211
Q ss_pred ccccccCCCCh-HHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCC--C----CCCCCCCCceEEEEEecC
Q 015367 298 QEAVACSRVNS-GVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYH--G----YGKAGWPRRARIILAEAG 370 (408)
Q Consensus 298 ~e~~~~~~~~~-~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~--~----~~~~~~~~g~rv~~i~~~ 370 (408)
..|. ++++.|.++++|+++||||+|. .++..++|+.++.+|++++. . ++....++|+|+++++.
T Consensus 180 -------l~n~~~l~~ll~~~~~v~~vl~GH~H~-~~~~~~~gi~~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~- 250 (275)
T PRK11148 180 -------LRNAHELAEVLAKFPNVKAILCGHIHQ-ELDLDWNGRRLLATPSTCVQFKPHCTNFTLDTVAPGWRELELHA- 250 (275)
T ss_pred -------CCCHHHHHHHHhcCCCceEEEecccCh-HHhceECCEEEEEcCCCcCCcCCCCCccccccCCCcEEEEEEcC-
Confidence 2344 6777777877899999999999 57778899999999998863 1 11124567999999974
Q ss_pred CCCCCccccceeEEEEEccCC
Q 015367 371 KGENGWMEVEMIKTWKRLDDQ 391 (408)
Q Consensus 371 ~~~~~~~~~~~~~tw~r~~~~ 391 (408)
+| ...+++.|++.+
T Consensus 251 ~g-------~~~~~~~~~~~~ 264 (275)
T PRK11148 251 DG-------SLETEVHRLADT 264 (275)
T ss_pred CC-------cEEEEEEEcCCC
Confidence 32 345666888773
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=231.59 Aligned_cols=195 Identities=47% Similarity=0.949 Sum_probs=153.8
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc-HHHHHHHHHhhhH
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD-VAESMIQAFGPAM 139 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~-~~~~~~~~l~~~~ 139 (408)
+|||+||||+|++...... +....+..+.+.+.+++++.+||+||++||+++...... .+..+.+.++.+.
T Consensus 2 ~~ki~~isDlH~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~ 73 (199)
T cd07383 2 KFKILQFADLHFGEGEGTC--------EGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMI 73 (199)
T ss_pred ceEEEEEeeecccCCCCCC--------CcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHH
Confidence 6999999999998765321 011134456778888888999999999999987665432 4566777777666
Q ss_pred hcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcce
Q 015367 140 ELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSI 219 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~ 219 (408)
..++|+++++||||.
T Consensus 74 ~~~~p~~~~~GNHD~----------------------------------------------------------------- 88 (199)
T cd07383 74 DRKIPWAATFGNHDG----------------------------------------------------------------- 88 (199)
T ss_pred HcCCCEEEECccCCC-----------------------------------------------------------------
Confidence 678999999999991
Q ss_pred eEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCcccccc--CCccccc
Q 015367 220 LNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYY--QNIVGQF 297 (408)
Q Consensus 220 ~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~--~~~~g~~ 297 (408)
+|++.++|++||+++++++... .....+.++|+|||+.+..+.|. ....|..
T Consensus 89 -------------------~g~l~~~ql~wL~~~l~~~~~~-------~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~ 142 (199)
T cd07383 89 -------------------YDWIRPSQIEWFKETSAALKKK-------YGKPIPSLAFFHIPLPEYREVWEGKGKVPGIN 142 (199)
T ss_pred -------------------CCCCCHHHHHHHHHHHHHHhhc-------cCCCCcceEEEecChHHHHhhhcccCCCCccC
Confidence 0236789999999999987421 12457999999999988776665 4555777
Q ss_pred ccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCC
Q 015367 298 QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYG 354 (408)
Q Consensus 298 ~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~ 354 (408)
.|...+...++++++.+.+.++|+++||||+|.++++...+|+++|+++.+|+++||
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~~~~~i~l~~g~~~g~~~y~ 199 (199)
T cd07383 143 NEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWLCYGRGTGYGGYG 199 (199)
T ss_pred CcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceecccCCEEEeCCCCCCCCCCC
Confidence 776666667889999999989999999999999999999999999999999998885
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-29 Score=232.04 Aligned_cols=245 Identities=21% Similarity=0.241 Sum_probs=157.8
Q ss_pred CCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCccc----HHHHHH
Q 015367 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIFGSSTTD----VAESMI 132 (408)
Q Consensus 59 ~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~~~----~~~~~~ 132 (408)
+++++|+++||+|++....... .....| ......++.+.+.+++. +||+|+++||+++.....+ .+..+.
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~--~~~~~~--~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~ 77 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLE--GGGDEW--DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLK 77 (262)
T ss_pred CCCEEEEEecCCccchhhcccc--Cchhhh--hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHH
Confidence 3689999999999996432110 000111 01223456666777766 9999999999987765321 223444
Q ss_pred HHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCC
Q 015367 133 QAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGS 212 (408)
Q Consensus 133 ~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~ 212 (408)
+.++. ...++|+++++||||.......+.+..|.. ..|..+|++...
T Consensus 78 ~~~~~-~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~---------------------------~~g~~~y~~~~~----- 124 (262)
T cd07395 78 DVLSL-LDPDIPLVCVCGNHDVGNTPTEESIKDYRD---------------------------VFGDDYFSFWVG----- 124 (262)
T ss_pred HHHhh-ccCCCcEEEeCCCCCCCCCCChhHHHHHHH---------------------------HhCCcceEEEEC-----
Confidence 44443 234789999999999965443333333321 122335666543
Q ss_pred CCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCC
Q 015367 213 HLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQN 292 (408)
Q Consensus 213 ~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~ 292 (408)
.+++++|||..+... ...+.+..+|++||+++|++.++ .+.+++|||+|||++.........
T Consensus 125 ------~~~~i~lds~~~~~~---~~~~~~~~~ql~WL~~~L~~~~~---------~~~~~~iv~~H~P~~~~~~~~~~~ 186 (262)
T cd07395 125 ------GVFFIVLNSQLFFDP---SEVPELAQAQDVWLEEQLEIAKE---------SDCKHVIVFQHIPWFLEDPDEEDS 186 (262)
T ss_pred ------CEEEEEeccccccCc---cccccchHHHHHHHHHHHHHHHh---------ccCCcEEEEECcCCccCCCCCCcc
Confidence 368999999754321 12356899999999999988742 246789999999997533221111
Q ss_pred cccccccccccCCCCh-HHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEecC
Q 015367 293 IVGQFQEAVACSRVNS-GVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEAG 370 (408)
Q Consensus 293 ~~g~~~e~~~~~~~~~-~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~~~ 370 (408)
.. .....+. ++.+.+.++ +|+++||||+|.+.. ..+.|+.++.++++|+. ++ ..++|+|+++++.+
T Consensus 187 ~~-------~~~~~~~~~l~~ll~~~-~V~~v~~GH~H~~~~-~~~~g~~~~~~~~~~~~-~~--~~~~g~~~~~v~~~ 253 (262)
T cd07395 187 YF-------NIPKSVRKPLLDKFKKA-GVKAVFSGHYHRNAG-GRYGGLEMVVTSAIGAQ-LG--NDKSGLRIVKVTED 253 (262)
T ss_pred cC-------CcCHHHHHHHHHHHHhc-CceEEEECccccCCc-eEECCEEEEEcCceecc-cC--CCCCCcEEEEECCC
Confidence 00 0111233 566666665 699999999999755 56789999888888864 33 34789999999843
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-27 Score=219.40 Aligned_cols=235 Identities=24% Similarity=0.255 Sum_probs=152.4
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|||+++||+|++.......+. + ......++.+.+.+++.+||+||++||+++... .+..+.+....+.+...
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~-----~--~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~-~~~~~~~~~~~~~l~~l 72 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRY-----Y--RNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDN-ARAEEALDAVLAILDRL 72 (267)
T ss_pred CeEEEEeccccccCCCcccch-----H--HHhHHHHHHHHHHHHcCCCCEEEECCCeecCCC-chHHHHHHHHHHHHHhc
Confidence 699999999988653211000 0 012344566677777788999999999986554 31223333333333345
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeE
Q 015367 142 GLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILN 221 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~ 221 (408)
++|+++++||||........ .. .. .. ...+..+|++... +++
T Consensus 73 ~~p~~~v~GNHD~~~~~~~~-~~-----~~-------~~--------------~~~~~~yysf~~~-----------~~~ 114 (267)
T cd07396 73 KGPVHHVLGNHDLYNPSREY-LL-----LY-------TL--------------LGLGAPYYSFSPG-----------GIR 114 (267)
T ss_pred CCCEEEecCccccccccHhh-hh-----cc-------cc--------------cCCCCceEEEecC-----------CcE
Confidence 79999999999996543211 00 00 00 1123446777554 368
Q ss_pred EEEEeCCCCCCcC---C----------------------cCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEE
Q 015367 222 LFFLDSGDRETVR---G----------------------VRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLA 276 (408)
Q Consensus 222 ~i~LDS~~~~~~~---~----------------------~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv 276 (408)
+++|||...+... . ....|.++++|++||+++|++.+ .+..++||
T Consensus 115 ~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~----------~~~~~viV 184 (267)
T cd07396 115 FIVLDGYDISALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEAD----------ANGEKVII 184 (267)
T ss_pred EEEEeCCccccccCCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHH----------hcCCeEEE
Confidence 9999996542110 0 01257899999999999998874 24578999
Q ss_pred EecCCCCCccccccCCcccccccccccCCCC-hHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCC
Q 015367 277 FFHIPIPETPQLYYQNIVGQFQEAVACSRVN-SGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGK 355 (408)
Q Consensus 277 ~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~-~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~ 355 (408)
|+|||+..... . .. ....+ ..+++.+.++++|+++||||+|.+. ....+|+.++.+|+++.+ +
T Consensus 185 ~~Hhp~~~~~~-~-~~----------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~-~~~~~gi~~~~~~a~~~~--~- 248 (267)
T cd07396 185 FSHFPLHPEST-S-PH----------GLLWNHEEVLSILRAYGCVKACISGHDHEGG-YAQRHGIHFLTLEGMVET--P- 248 (267)
T ss_pred EEeccCCCCCC-C-cc----------ccccCHHHHHHHHHhCCCEEEEEcCCcCCCC-ccccCCeeEEEechhhcC--C-
Confidence 99999865321 0 00 01123 4677777776789999999999964 456899999999999876 3
Q ss_pred CCCCCceEEEEEec
Q 015367 356 AGWPRRARIILAEA 369 (408)
Q Consensus 356 ~~~~~g~rv~~i~~ 369 (408)
+....+.++++..
T Consensus 249 -~~~~~~~~~~~~~ 261 (267)
T cd07396 249 -PESNAFGVVIVYE 261 (267)
T ss_pred -CCCCceEEEEEeC
Confidence 3355777888874
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-26 Score=209.51 Aligned_cols=227 Identities=21% Similarity=0.244 Sum_probs=149.4
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
||++|||+|++......+++. .....++.+.+.+++. +||+||++||+++... .+.++.+.+.++.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~--------~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~--- 68 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGV--------DTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-PESYERLRELLAA--- 68 (240)
T ss_pred CEEEEeCCccCCCCcceecCc--------CHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-HHHHHHHHHHHhh---
Confidence 699999999997542111110 1123456677777776 9999999999887654 3445556555543
Q ss_pred cCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCccee
Q 015367 141 LGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSIL 220 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~ 220 (408)
.++|+++|+||||.... ..++ +.... ...+..+|.+.+. .+
T Consensus 69 ~~~p~~~v~GNHD~~~~-----~~~~---~~~~~--------------------~~~~~~~~~~~~~-----------~~ 109 (240)
T cd07402 69 LPIPVYLLPGNHDDRAA-----MRAV---FPELP--------------------PAPGFVQYVVDLG-----------GW 109 (240)
T ss_pred cCCCEEEeCCCCCCHHH-----HHHh---hcccc--------------------ccccccceeEecC-----------CE
Confidence 38999999999998421 1111 11000 0112335666554 37
Q ss_pred EEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccc
Q 015367 221 NLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEA 300 (408)
Q Consensus 221 ~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~ 300 (408)
++++|||..... ..|.++++|++||++.|++. ..+++|+++||||......+.+..
T Consensus 110 ~~i~lds~~~~~-----~~~~~~~~ql~wL~~~L~~~------------~~~~~il~~H~pp~~~~~~~~~~~------- 165 (240)
T cd07402 110 RLILLDSSVPGQ-----HGGELCAAQLDWLEAALAEA------------PDKPTLVFLHHPPFPVGIAWMDAI------- 165 (240)
T ss_pred EEEEEeCCCCCC-----cCCEECHHHHHHHHHHHHhC------------CCCCEEEEECCCCccCCchhhhhh-------
Confidence 899999964321 45679999999999998765 357899999999975422111110
Q ss_pred cccCCCC-hHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCC--CCC----CCCCCceEEEEEe
Q 015367 301 VACSRVN-SGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHG--YGK----AGWPRRARIILAE 368 (408)
Q Consensus 301 ~~~~~~~-~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~--~~~----~~~~~g~rv~~i~ 368 (408)
...+ .++++.+.++++|+++||||.|. ......+|+.++.++++|+.- ..+ .+...|++.+.+.
T Consensus 166 ---~~~~~~~~~~~l~~~~~v~~v~~GH~H~-~~~~~~~g~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (240)
T cd07402 166 ---GLRNAEALAAVLARHPNVRAILCGHVHR-PIDGSWGGIPLLTAPSTCHQFAPDLDDFALDALAPGYRALSLH 236 (240)
T ss_pred ---hCCCHHHHHHHHhcCCCeeEEEECCcCc-hHHeEECCEEEEEcCcceeeecCCCCcccccccCCCCcEEEEe
Confidence 0123 46777787776799999999999 566788999999999988641 111 1233478877775
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=207.55 Aligned_cols=262 Identities=15% Similarity=0.103 Sum_probs=156.5
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcc--cHHHHHHHHHhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTT--DVAESMIQAFGP 137 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l~~ 137 (408)
.++||++++|+|.+.... .++++.+.+. ..+||+||++||+++..... ..+..+.+.+++
T Consensus 3 ~~~~f~v~gD~~~~~~~~----------------~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~ 64 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNS----------------TNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEP 64 (294)
T ss_pred CcEEEEEEEECCCCCCCc----------------HHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHH
Confidence 579999999999863211 1223333222 37999999999998765543 456677777776
Q ss_pred hHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCc
Q 015367 138 AMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANS 217 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~ 217 (408)
+ ...+|+++++||||+...........+ +. ....+... ....+..+|++.+.+
T Consensus 65 ~-~~~~P~~~~~GNHD~~~~~~~~~~~~~---~~---~~~~~~~~-----------~~~~~~~~Ysf~~g~--------- 117 (294)
T cd00839 65 L-ASYVPYMVTPGNHEADYNFSFYKIKAF---FP---RFRFPHSP-----------SGSTSNLWYSFDVGP--------- 117 (294)
T ss_pred H-HhcCCcEEcCcccccccCCCCcccccc---cc---cccccCCC-----------CCCCCCceEEEeeCC---------
Confidence 3 557999999999999765322110000 00 00000000 011234467877653
Q ss_pred ceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccc
Q 015367 218 SILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQF 297 (408)
Q Consensus 218 ~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~ 297 (408)
++|++|||..... .+.+..+|++||++.|++..+ ...+++||++|||++......... ..
T Consensus 118 --v~fi~Lds~~~~~------~~~~~~~q~~WL~~~L~~~~~---------~~~~~~iv~~H~P~~~~~~~~~~~--~~- 177 (294)
T cd00839 118 --VHFVSLSTEVDFY------GDGPGSPQYDWLEADLAKVDR---------SKTPWIIVMGHRPMYCSNTDHDDC--IE- 177 (294)
T ss_pred --EEEEEEecccccc------cCCCCcHHHHHHHHHHHHhcc---------cCCCeEEEEeccCcEecCcccccc--ch-
Confidence 7899999964321 356899999999999988742 134579999999997543211100 00
Q ss_pred ccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccC---------------CCCeEEEEeCCcCCCCCC-----C--
Q 015367 298 QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGN---------------LNGIWFCYGGGIGYHGYG-----K-- 355 (408)
Q Consensus 298 ~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~---------------~~gi~~~~~~~sg~~~~~-----~-- 355 (408)
.......+.+.|.++ +|+++||||+|.+++... .+|+..+..|+.|...+. +
T Consensus 178 -----~~~~~~~l~~ll~~~-~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~ 251 (294)
T cd00839 178 -----GEKMRAALEDLFYKY-GVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPP 251 (294)
T ss_pred -----hHHHHHHHHHHHHHh-CCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCcCcccCCCC
Confidence 001122455555665 699999999999764432 257777666666642211 0
Q ss_pred -----CCCCCceEEEEEecCCCCCCccccceeEEEEEccCCCCCcccceeee
Q 015367 356 -----AGWPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLW 402 (408)
Q Consensus 356 -----~~~~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~ 402 (408)
.....|+-++++.-.+ .-...|++..+|. ++|.-+|.
T Consensus 252 ~~~~~~~~~~g~~~~~~~~~t--------~l~~~~~~~~~g~--v~D~f~i~ 293 (294)
T cd00839 252 AWSAFRESDYGFGRLTVHNST--------HLHFEWIRNDDGV--VIDSFWII 293 (294)
T ss_pred CceEEEeccCCEEEEEEEecC--------eEEEEEEECCCCe--EEEEEEEe
Confidence 0123577777776211 3445566666654 78876653
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=206.94 Aligned_cols=262 Identities=18% Similarity=0.181 Sum_probs=157.2
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
.++||++++|+|..... +...+.+++.+||+|+++||+++.+.....+..+.+.++++
T Consensus 138 ~~~~f~v~GDlG~~~~~---------------------~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l- 195 (427)
T PLN02533 138 FPIKFAVSGDLGTSEWT---------------------KSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPL- 195 (427)
T ss_pred CCeEEEEEEeCCCCccc---------------------HHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhH-
Confidence 47999999999753221 12334456779999999999987654333456666666663
Q ss_pred hcCCCEEEEcCCCCCCCCCC--HHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCc
Q 015367 140 ELGLPWAAVLGNHDQESTMD--REELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANS 217 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~ 217 (408)
.+.+|+++++||||...... ......+...| ..|... . ...+..+|++++++
T Consensus 196 ~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf------~mP~~~------~-----g~~~~~yYSfd~g~--------- 249 (427)
T PLN02533 196 ASQRPWMVTHGNHELEKIPILHPEKFTAYNARW------RMPFEE------S-----GSTSNLYYSFNVYG--------- 249 (427)
T ss_pred hhcCceEEeCccccccccccccCcCccchhhcc------cCCccc------c-----CCCCCceEEEEECC---------
Confidence 56799999999999864211 00000011111 111100 0 01123478888764
Q ss_pred ceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccc
Q 015367 218 SILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQF 297 (408)
Q Consensus 218 ~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~ 297 (408)
++|++|||... .....+|++||+++|++..++ ...++||++|+|++....... +..
T Consensus 250 --vhfI~Lds~~~---------~~~~~~Q~~WLe~dL~~~~r~---------~~pwiIv~~H~P~y~s~~~~~----~~~ 305 (427)
T PLN02533 250 --VHIIMLGSYTD---------FEPGSEQYQWLENNLKKIDRK---------TTPWVVAVVHAPWYNSNEAHQ----GEK 305 (427)
T ss_pred --EEEEEEeCCcc---------ccCchHHHHHHHHHHHhhccc---------CCCEEEEEeCCCeeecccccC----Ccc
Confidence 68999999521 124689999999999886421 346689999999986432210 100
Q ss_pred ccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccC-------CCCeEEEEeCCcCCC-----CCC-C-CCC-----
Q 015367 298 QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGN-------LNGIWFCYGGGIGYH-----GYG-K-AGW----- 358 (408)
Q Consensus 298 ~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~-------~~gi~~~~~~~sg~~-----~~~-~-~~~----- 358 (408)
+.. .....+...|.++ +|+++||||+|.+++... ..|...+..|+.|.. .+. + .+|
T Consensus 306 -~~~---~~r~~le~Ll~~~-~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~ 380 (427)
T PLN02533 306 -ESV---GMKESMETLLYKA-RVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380 (427)
T ss_pred -hhH---HHHHHHHHHHHHh-CCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 000 0112344455554 699999999999765331 235445545544431 111 0 112
Q ss_pred -CCceEEEEEecCCCCCCccccceeEEEEEccCCCCCcccceeeeccCC
Q 015367 359 -PRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMCP 406 (408)
Q Consensus 359 -~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~~~~~ 406 (408)
.-|+-.+++- +. ++-..+|+|.+++..++.|+.||-+...
T Consensus 381 ~~~G~~~l~v~-n~-------t~l~~~~~~~~~~~~~~~D~~~i~~~~~ 421 (427)
T PLN02533 381 ASFGHGQLNVV-DA-------NTMEWTWHRNDDDQSVASDSVWLKSLLT 421 (427)
T ss_pred ccCCEEEEEEE-cC-------CeEEEEEEecCCCCceeeeEEEEEeccC
Confidence 2355566554 11 3678889998888778999999977654
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-23 Score=186.32 Aligned_cols=161 Identities=19% Similarity=0.261 Sum_probs=109.3
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|+|+++||+|++..... ..+ ....+++.+.+++.+||+||++||+++.......+..+.+.++.+.+.
T Consensus 1 f~~~~~~D~q~~~~~~~-------~~~-----~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~ 68 (214)
T cd07399 1 FTLAVLPDTQYYTESYP-------EVF-----DAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKA 68 (214)
T ss_pred CEEEEecCCCcCCcCCH-------HHH-----HHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHc
Confidence 68999999998755321 111 123456777777889999999999987665345677777777775457
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeE
Q 015367 142 GLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILN 221 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~ 221 (408)
++|+++++||||.
T Consensus 69 ~~p~~~~~GNHD~------------------------------------------------------------------- 81 (214)
T cd07399 69 GIPYSVLAGNHDL------------------------------------------------------------------- 81 (214)
T ss_pred CCcEEEECCCCcc-------------------------------------------------------------------
Confidence 8999999999992
Q ss_pred EEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccccccc
Q 015367 222 LFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAV 301 (408)
Q Consensus 222 ~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~ 301 (408)
++.+|+. ++++|++||+++|++. +.+++||++|||+.... .+.......
T Consensus 82 ~~~ld~~-------------~~~~ql~WL~~~L~~~------------~~~~~iv~~H~p~~~~~-~~~~~~~~~----- 130 (214)
T cd07399 82 VLALEFG-------------PRDEVLQWANEVLKKH------------PDRPAILTTHAYLNCDD-SRPDSIDYD----- 130 (214)
T ss_pred hhhCCCC-------------CCHHHHHHHHHHHHHC------------CCCCEEEEecccccCCC-CcCcccccc-----
Confidence 1122331 4589999999998864 46789999999987432 221111000
Q ss_pred ccCCCChHHH-HHHHhcCCeEEEEeccCCCCC
Q 015367 302 ACSRVNSGVL-QTLVSLGDIKAVFVGHDHTND 332 (408)
Q Consensus 302 ~~~~~~~~~l-~~l~~~~~V~~v~~GH~H~n~ 332 (408)
.......+.+ +.+.++++|++|||||.|...
T Consensus 131 ~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~ 162 (214)
T cd07399 131 SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAG 162 (214)
T ss_pred cccccHHHHHHHHHhCCCCEEEEEccccCCCc
Confidence 0001223444 556677789999999999854
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-23 Score=191.35 Aligned_cols=208 Identities=15% Similarity=0.125 Sum_probs=123.9
Q ss_pred EEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc--------ccHHHHHHHHH
Q 015367 64 ILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST--------TDVAESMIQAF 135 (408)
Q Consensus 64 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~--------~~~~~~~~~~l 135 (408)
|+||||+|++...... .....+.+.+.+++.+||+||++||+++.... ...+..+.+.+
T Consensus 2 ~~~iSDlH~g~~~~~~-------------~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~ 68 (256)
T cd07401 2 FVHISDIHVSSFHPPN-------------RAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNIL 68 (256)
T ss_pred EEEecccccCCcCchh-------------hhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHH
Confidence 7999999999764211 00011456778888999999999999876532 11223444443
Q ss_pred hhhHh-cCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCC
Q 015367 136 GPAME-LGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHL 214 (408)
Q Consensus 136 ~~~~~-~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~ 214 (408)
..... ...|++.|+||||.++..+.....+++..+.. ...+ ...+|.....
T Consensus 69 ~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~---~~~~------------------~~~~~~~~~~------- 120 (256)
T cd07401 69 KESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSA---TGRD------------------GSFSFSHTTR------- 120 (256)
T ss_pred HHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhhe---ecCC------------------CccceEEEec-------
Confidence 32211 15899999999999754332222222221110 0000 1112222110
Q ss_pred CCcceeEEEEEeCCCCCCc-CCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCc
Q 015367 215 ANSSILNLFFLDSGDRETV-RGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNI 293 (408)
Q Consensus 215 ~~~~~~~~i~LDS~~~~~~-~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~ 293 (408)
...+++++|||..+... ......|.+.++|++||++.|++.+ ..+++||++|||+.......
T Consensus 121 --~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~~~L~~~~-----------~~~~~IV~~HhP~~~~~~~~---- 183 (256)
T cd07401 121 --FGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRLEKELEKST-----------NSNYTIWFGHYPTSTIISPS---- 183 (256)
T ss_pred --CCCEEEEEEcCccCCCCCCCCceeccCCHHHHHHHHHHHHhcc-----------cCCeEEEEEcccchhccCCC----
Confidence 12478999999754211 1112358899999999999988763 45689999999985421110
Q ss_pred ccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcc--cCCCCe
Q 015367 294 VGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFC--GNLNGI 340 (408)
Q Consensus 294 ~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~--~~~~gi 340 (408)
. ....++++.|.++ +|+++||||.|.++.. ..++|+
T Consensus 184 ~----------~~~~~~~~ll~~~-~v~~vl~GH~H~~~~~~p~h~~~~ 221 (256)
T cd07401 184 A----------KSSSKFKDLLKKY-NVTAYLCGHLHPLGGLEPVHYAGH 221 (256)
T ss_pred c----------chhHHHHHHHHhc-CCcEEEeCCccCCCcceeeeecCC
Confidence 0 1122477777776 5999999999996541 245665
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=7e-22 Score=186.71 Aligned_cols=239 Identities=18% Similarity=0.229 Sum_probs=144.9
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc-----HHHHHHHHHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD-----VAESMIQAFG 136 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~-----~~~~~~~~l~ 136 (408)
++|++++|.-.+.... .....+.+.+.+++.+|||||++||+++..+... ....+.+.+.
T Consensus 1 ~~f~~~gD~g~~~~~~---------------~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~ 65 (277)
T cd07378 1 LRFLALGDWGGGGTAG---------------QKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYS 65 (277)
T ss_pred CeEEEEeecCCCCCHH---------------HHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHcc
Confidence 4799999998652111 1234456667777789999999999986654311 1133444444
Q ss_pred hhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCC
Q 015367 137 PAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLAN 216 (408)
Q Consensus 137 ~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~ 216 (408)
.+ ..++|+|+|+||||........ ..+.. .+ ..+. ...+..+|++...... .
T Consensus 66 ~~-~~~~P~~~v~GNHD~~~~~~~~--~~~~~-~~-----~~~~--------------~~~~~~~y~~~~~~~~-----~ 117 (277)
T cd07378 66 AP-SLQVPWYLVLGNHDYSGNVSAQ--IDYTK-RP-----NSPR--------------WTMPAYYYRVSFPFPS-----S 117 (277)
T ss_pred ch-hhcCCeEEecCCcccCCCchhe--eehhc-cC-----CCCC--------------ccCcchheEEEeecCC-----C
Confidence 32 3689999999999997543221 00000 00 0111 1122346676554210 1
Q ss_pred cceeEEEEEeCCCCCCcCC------cCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCcccccc
Q 015367 217 SSILNLFFLDSGDRETVRG------VRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYY 290 (408)
Q Consensus 217 ~~~~~~i~LDS~~~~~~~~------~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~ 290 (408)
...++|++|||+.+..... ....+.+..+|++||+++|++.+ .+++||++|||++.......
T Consensus 118 ~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~------------~~~~iv~~H~P~~~~~~~~~ 185 (277)
T cd07378 118 DTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAAST------------ADWKIVVGHHPIYSSGEHGP 185 (277)
T ss_pred CCEEEEEEEeChhHcCccccccccccCcchhhHHHHHHHHHHHHHhcC------------CCeEEEEeCccceeCCCCCC
Confidence 2358999999986532110 12346799999999999987753 47899999999975422110
Q ss_pred CCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCC--CeEEEEeCCcCCCCCCC-------------
Q 015367 291 QNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLN--GIWFCYGGGIGYHGYGK------------- 355 (408)
Q Consensus 291 ~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~--gi~~~~~~~sg~~~~~~------------- 355 (408)
. +.....+.+.+.++ +|+++|+||.|.... ...+ |+.++.+++.|......
T Consensus 186 ~------------~~~~~~l~~l~~~~-~v~~vl~GH~H~~~~-~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ 251 (277)
T cd07378 186 T------------SCLVDRLLPLLKKY-KVDAYLSGHDHNLQH-IKDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGF 251 (277)
T ss_pred c------------HHHHHHHHHHHHHc-CCCEEEeCCccccee-eecCCCCcEEEEeCCCcccCCCCCccCccccccccc
Confidence 0 01123566666666 599999999998543 3444 88887777665421111
Q ss_pred CCCCCceEEEEEec
Q 015367 356 AGWPRRARIILAEA 369 (408)
Q Consensus 356 ~~~~~g~rv~~i~~ 369 (408)
.....|+.+++|+.
T Consensus 252 ~~~~~Gy~~i~v~~ 265 (277)
T cd07378 252 TSSGGGFAYLELTK 265 (277)
T ss_pred ccCCCCEEEEEEec
Confidence 12347888888873
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-22 Score=188.85 Aligned_cols=226 Identities=21% Similarity=0.206 Sum_probs=134.5
Q ss_pred EEEEeccCcCCCCc------cccCccc------------cccc---cccCChHHHHHHHHHHHHc--CCCEEEEcCCcCC
Q 015367 64 ILQVADMHYGMGKV------TRCRDVT------------ATEF---KYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIF 120 (408)
Q Consensus 64 i~~iSDlH~~~~~~------~~~~~~~------------~~~~---~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~ 120 (408)
|+||||+|+..... ..|+... ...| +|-....+++.+.+.+++. +|||||+|||++.
T Consensus 1 ~l~~sDiH~D~~Y~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~ 80 (296)
T cd00842 1 FLHISDIHYDPLYKVGSEYSANCHSPLCCRDESGDISPPAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVR 80 (296)
T ss_pred CEEeeccCCCCCCcCCCCCcCCCCCCCccCCCCCCCCCCCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCC
Confidence 68999999974331 2343321 1223 3335567778888888877 9999999999997
Q ss_pred CCCcccH--------HHHHHHHHhhhHhcCCCEEEEcCCCCCCCCC--C----HHHHHH-HHHHccCCccccCCCCCCCc
Q 015367 121 GSSTTDV--------AESMIQAFGPAMELGLPWAAVLGNHDQESTM--D----REELMY-FISLMDYSVAQVNPPAEDPS 185 (408)
Q Consensus 121 ~~~~~~~--------~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~--~----~~~~~~-~~~~~~~~~~~~~p~~~~~~ 185 (408)
....... ...+.+.++. ...++|++.++||||..... . .....+ +...+.. ..+...
T Consensus 81 h~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~----~l~~~~--- 152 (296)
T cd00842 81 HDVDEQTPETLVLISISNLTSLLKK-AFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKS----WLPEEA--- 152 (296)
T ss_pred CCchhhchhHHHHHHHHHHHHHHHH-hCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHh----hcCHHH---
Confidence 7653211 1122222222 12479999999999997531 1 111111 1111110 001000
Q ss_pred ccccCCccccccCccceEEEeeCCCCCCCCCcceeEEEEEeCCCCCCcCCcC--cCCCCcHHHHHHHHHHHHHHhhhhcc
Q 015367 186 NLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVR--TYGYIKESQLRWLHRVSEALQGQKQD 263 (408)
Q Consensus 186 ~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~~i~LDS~~~~~~~~~~--~~g~i~~~Ql~WL~~~L~~~~~~~~~ 263 (408)
.......++|+..+. ..+++|+|||..+....... ..+....+|++||+++|+++++
T Consensus 153 -------~~~~~~ggYY~~~~~----------~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~---- 211 (296)
T cd00842 153 -------EETFKKGGYYSVPVK----------PGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQ---- 211 (296)
T ss_pred -------HHHhhcceEEEEEcC----------CCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHH----
Confidence 001223456776542 25899999998654322111 1234668999999999999862
Q ss_pred cccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcCC-eEEEEeccCCCCCcccCC
Q 015367 264 SNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGD-IKAVFVGHDHTNDFCGNL 337 (408)
Q Consensus 264 ~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~-V~~v~~GH~H~n~~~~~~ 337 (408)
++..++|++|||+........ +....++.+.+.++++ |.++|+||+|..++...+
T Consensus 212 ------~~~~v~I~~HiPp~~~~~~~~-------------~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~~~ 267 (296)
T cd00842 212 ------AGEKVWIIGHIPPGVNSYDTL-------------ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRVFY 267 (296)
T ss_pred ------CCCeEEEEeccCCCCcccccc-------------hHHHHHHHHHHHHHHHhhheeeecccccceEEEEe
Confidence 457899999999975321110 0122367777777764 689999999997766544
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-19 Score=174.56 Aligned_cols=132 Identities=20% Similarity=0.333 Sum_probs=92.4
Q ss_pred CccceEEEeeCCCCCCCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEE
Q 015367 198 GFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAF 277 (408)
Q Consensus 198 g~~~y~~~v~~~~~~~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~ 277 (408)
|..||++.+.+ .+++|+|||.... + ...|.++++|++||+++|++. +.+++|||
T Consensus 290 G~~YYSFd~~g----------gvrfIvLDSt~~~---G-~~~G~L~eeQL~WLeqeLa~a------------~~k~VVVf 343 (496)
T TIGR03767 290 GTGYYTFDIAG----------GVRGISMDTTNRA---G-GDEGSLGQTQFKWIKDTLRAS------------SDTLFVLF 343 (496)
T ss_pred CCceEEEEeEC----------CEEEEEEeCCCcC---C-CcCCccCHHHHHHHHHHHhcC------------CCCCEEEE
Confidence 56789988433 3789999997431 1 246889999999999998764 46789999
Q ss_pred ecCCCCCccccccCCcc-cccccccccCCCC-hHHHHHHHhcCCeEEEEeccCCCCCcccCC---------CCeEEEEeC
Q 015367 278 FHIPIPETPQLYYQNIV-GQFQEAVACSRVN-SGVLQTLVSLGDIKAVFVGHDHTNDFCGNL---------NGIWFCYGG 346 (408)
Q Consensus 278 ~HhPl~~~~~~~~~~~~-g~~~e~~~~~~~~-~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~---------~gi~~~~~~ 346 (408)
+|||+......+.+... +. ...+ .++++.|.++++|.++||||.|.+.. ..+ .|+|-+.++
T Consensus 344 ~HHPp~s~g~~~~Dp~~pg~-------~~~n~~eLldLL~~ypnV~aVfsGHvH~n~i-~~~~~~~~~~p~~gfweI~Ta 415 (496)
T TIGR03767 344 SHHTSWSMVNELTDPVDPGE-------KRHLGTELVSLLLEHPNVLAWVNGHTHSNKI-TAHRRVEGVGKDKGFWEINTA 415 (496)
T ss_pred ECCCCccccccccccccccc-------cccCHHHHHHHHhcCCCceEEEECCcCCCcc-ccccCCCCCCCcCCeEEEecc
Confidence 99998765433332211 11 1223 47888898888999999999999753 322 245554442
Q ss_pred CcCCCCCCCCCCCCceEEEEEecC
Q 015367 347 GIGYHGYGKAGWPRRARIILAEAG 370 (408)
Q Consensus 347 ~sg~~~~~~~~~~~g~rv~~i~~~ 370 (408)
+ + .+++.-+|+|||..+
T Consensus 416 S-----l--vdfPq~~Ri~Ei~~n 432 (496)
T TIGR03767 416 S-----H--IDFPQQGRIIELADN 432 (496)
T ss_pred c-----c--ccCCCCceEEEEEeC
Confidence 1 2 367889999999854
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.9e-19 Score=162.64 Aligned_cols=215 Identities=16% Similarity=0.077 Sum_probs=120.8
Q ss_pred EEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 64 ILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 64 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|.++||+|++...... ++..++ ...+..+.+.+.++.. +||+||++||+++... .+ ...+.+..+...
T Consensus 1 ~~~~sDlHl~~~~~~~-~~~~g~-----~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~-~~---~~~~~l~~l~~l 70 (232)
T cd07393 1 IFAIADLHLNLDPTKP-MDVFGP-----EWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK-LE---EAKLDLAWIDAL 70 (232)
T ss_pred CeEEEeeccCCCCCCC-CcccCc-----cHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC-hH---HHHHHHHHHHhC
Confidence 4689999998543110 011111 0124556677776665 9999999999874432 22 222333322334
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeE
Q 015367 142 GLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILN 221 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~ 221 (408)
..|+|+|+||||++. .....+.+.+..... .. . .+..+.+. .+.
T Consensus 71 ~~~v~~V~GNHD~~~-~~~~~~~~~l~~~~~---~~--------------------~-~n~~~~~~-----------~i~ 114 (232)
T cd07393 71 PGTKVLLKGNHDYWW-GSASKLRKALEESRL---AL--------------------L-FNNAYIDD-----------DVA 114 (232)
T ss_pred CCCeEEEeCCccccC-CCHHHHHHHHHhcCe---EE--------------------e-ccCcEEEC-----------CEE
Confidence 568999999999853 223333322221000 00 0 01122111 244
Q ss_pred EEEEeCCCCCCcCC--------cCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCc
Q 015367 222 LFFLDSGDRETVRG--------VRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNI 293 (408)
Q Consensus 222 ~i~LDS~~~~~~~~--------~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~ 293 (408)
++.++...+...+. ....|.+..+|+.||++.|+++... ....++|+++|+|+.....
T Consensus 115 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~--------~~~~~~i~~~H~p~~~~~~------ 180 (232)
T cd07393 115 ICGTRGWDNPGNPWPPINETLKVEEDEKIFERELERLELSLKAAKKR--------EKEKIKIVMLHYPPANENG------ 180 (232)
T ss_pred EEEEEeeCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHhC--------CCCCCEEEEECCCCcCCCC------
Confidence 55554211110000 0123556788999999999887521 1225799999999864210
Q ss_pred ccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCc----ccCCCCeEEEEeCCcCCC
Q 015367 294 VGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDF----CGNLNGIWFCYGGGIGYH 351 (408)
Q Consensus 294 ~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~----~~~~~gi~~~~~~~sg~~ 351 (408)
....+...+.+. +|++++|||+|.... ....+|+.+..++++++.
T Consensus 181 ------------~~~~~~~~~~~~-~v~~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~~~ 229 (232)
T cd07393 181 ------------DDSPISKLIEEY-GVDICVYGHLHGVGRDRAINGERGGIRYQLVSADYLN 229 (232)
T ss_pred ------------CHHHHHHHHHHc-CCCEEEECCCCCCcccccccceECCEEEEEEcchhcC
Confidence 112466666776 599999999998543 234689988888877653
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-18 Score=167.49 Aligned_cols=264 Identities=18% Similarity=0.181 Sum_probs=165.7
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcc-cHHHHHHHHHhhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTT-DVAESMIQAFGPA 138 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~-~~~~~~~~~l~~~ 138 (408)
.+.+++++.|+-....... + +.......++|+|++.|||.+..... ..++.+.+.+++
T Consensus 146 ~~~~~~i~GDlG~~~~~~s-----------------~---~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp- 204 (452)
T KOG1378|consen 146 SPTRAAIFGDMGCTEPYTS-----------------T---LRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEP- 204 (452)
T ss_pred CceeEEEEccccccccccc-----------------h---HhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhh-
Confidence 5799999999976554311 1 11111233799999999999887766 478888888888
Q ss_pred HhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcc
Q 015367 139 MELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSS 218 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~ 218 (408)
+.+.+|++++.||||....... .| .++......|...+ .....-+|++++++
T Consensus 205 ~As~vPymv~~GNHE~d~~~~~----~F---~~y~~Rf~mP~~~s-----------~s~~~l~YSfd~G~---------- 256 (452)
T KOG1378|consen 205 IASYVPYMVCSGNHEIDWPPQP----CF---VPYSARFNMPGNSS-----------ESDSNLYYSFDVGG---------- 256 (452)
T ss_pred hhccCceEEecccccccCCCcc----cc---cccceeeccCCCcC-----------CCCCceeEEEeecc----------
Confidence 5889999999999999765322 01 11211112221100 01112378888775
Q ss_pred eeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccc
Q 015367 219 ILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQ 298 (408)
Q Consensus 219 ~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~ 298 (408)
++|++|+|-.+. + -....+|.+||+++|+++.+. +..++||++|.|++...... .++
T Consensus 257 -vhfv~lsse~~~---~----~~~~~~QY~WL~~dL~~v~r~---------~tPWlIv~~HrP~Y~S~~~~------~~r 313 (452)
T KOG1378|consen 257 -VHFVVLSTETYY---N----FLKGTAQYQWLERDLASVDRK---------KTPWLIVQGHRPMYCSSNDA------HYR 313 (452)
T ss_pred -EEEEEEeccccc---c----ccccchHHHHHHHHHHHhccc---------CCCeEEEEecccceecCCch------hhc
Confidence 789999995432 1 125689999999999998631 27899999999998654311 122
Q ss_pred cccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCC------------------CeEEEEeCCcCCCC----CCC-
Q 015367 299 EAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLN------------------GIWFCYGGGIGYHG----YGK- 355 (408)
Q Consensus 299 e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~------------------gi~~~~~~~sg~~~----~~~- 355 (408)
|+.. ......+-+.+.++ +|+++|.||.|.+++....- .+.+..+.+.+-.+ +.+
T Consensus 314 eG~~-~~~~~~LE~l~~~~-~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~ 391 (452)
T KOG1378|consen 314 EGEF-ESMREGLEPLFVKY-KVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQ 391 (452)
T ss_pred cCcc-hhhHHHHHHHHHHh-ceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCC
Confidence 3211 00112455556666 59999999999987654321 12333222211000 000
Q ss_pred ------CCCCCceEEEEEecCCCCCCccccceeEEEEEccCCCCCcccceeeeccC
Q 015367 356 ------AGWPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMC 405 (408)
Q Consensus 356 ------~~~~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~~~~ 405 (408)
....-|+-++++.- . ++...+|+|..+++.+++|.-+|....
T Consensus 392 p~~Sa~R~~dfG~~~L~v~N-~-------TH~~~~~~~~~d~~g~~~D~fwl~k~~ 439 (452)
T KOG1378|consen 392 PEWSAFREGDFGYTRLTAKN-G-------THAHVHWVRNSDASGVVIDSFWLIKDY 439 (452)
T ss_pred CcccccccccCCeEEEEEec-C-------ceEEEEEEeccCCCceEeeeEEEEccc
Confidence 12345888888862 2 378999999988877899998886643
|
|
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=165.56 Aligned_cols=201 Identities=24% Similarity=0.323 Sum_probs=124.1
Q ss_pred eEEEEEeccCcCC-CCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGM-GKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
+||+||||+|++. ... ....++.+.+.++..+||+||+||||.+. +..+.++.+.+.+.. ..
T Consensus 1 ~~i~~isD~H~~~~~~~---------------~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~-~~ 63 (301)
T COG1409 1 MRIAHISDLHLGALGVD---------------SEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLAR-LE 63 (301)
T ss_pred CeEEEEecCcccccccc---------------hHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhh-cc
Confidence 5899999999995 221 12345667777788899999999998765 445566777666652 35
Q ss_pred cCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCccee
Q 015367 141 LGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSIL 220 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~ 220 (408)
.+.|++++|||||............+ . ... .+...... ...+
T Consensus 64 ~~~~~~~vpGNHD~~~~~~~~~~~~~-----~-----~~~--------------------~~~~~~~~--------~~~~ 105 (301)
T COG1409 64 LPAPVIVVPGNHDARVVNGEAFSDQF-----F-----NRY--------------------AVLVGACS--------SGGW 105 (301)
T ss_pred CCCceEeeCCCCcCCchHHHHhhhhh-----c-----ccC--------------------cceEeecc--------CCce
Confidence 68899999999999765432211000 0 000 00100000 0246
Q ss_pred EEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCC-CCeEEEecCCCCCccccccCCccccccc
Q 015367 221 NLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQ-LPGLAFFHIPIPETPQLYYQNIVGQFQE 299 (408)
Q Consensus 221 ~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~-~~~iv~~HhPl~~~~~~~~~~~~g~~~e 299 (408)
+++.+||.... ...|.++.+|++||++.|++... .. ..++++.|||+.. ...+.....
T Consensus 106 ~~~~~d~~~~~-----~~~G~~~~~q~~~l~~~l~~~~~----------~~~~~~v~~~hh~~~~-~~~~~~~~~----- 164 (301)
T COG1409 106 RVIGLDSSVPG-----VPLGRLGAEQLDWLEEALAAAPE----------RAKDTVVVLHHHPLPS-PGTGVDRVA----- 164 (301)
T ss_pred EEEEecCCCCC-----CCCCEECHHHHHHHHHHHHhCcc----------ccCceEEEecCCCCCC-CCCccceee-----
Confidence 79999996432 25678999999999999887641 11 1344455555543 222111100
Q ss_pred ccccCCCC-hHHHHHHHhcCC-eEEEEeccCCCCC-cccCCCCeEEE
Q 015367 300 AVACSRVN-SGVLQTLVSLGD-IKAVFVGHDHTND-FCGNLNGIWFC 343 (408)
Q Consensus 300 ~~~~~~~~-~~~l~~l~~~~~-V~~v~~GH~H~n~-~~~~~~gi~~~ 343 (408)
..+ ..+...+...++ |+++++||.|... ......+..+.
T Consensus 165 -----l~~~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~~~ 206 (301)
T COG1409 165 -----LRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGTRLS 206 (301)
T ss_pred -----eecchhHHHHHHhcCCceEEEEeCcccccccccceeCCeeee
Confidence 122 356666777766 9999999999942 55566666555
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.7e-19 Score=163.65 Aligned_cols=232 Identities=16% Similarity=0.100 Sum_probs=114.6
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcC
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELG 142 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 142 (408)
||+++||+|+...... ....++.+.+.+++.+||+||++||+++.. ... ..+.+.+.++ .+
T Consensus 1 ki~~iSDlH~~~~~~~--------------~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~--~~~-~~~~~~l~~~--~~ 61 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFD--------------TEEMLETLAQYLKKQKIDHLHIAGDISNDF--QRS-LPFIEKLQEL--KG 61 (239)
T ss_pred CEEEEEeecCCCCCCC--------------HHHHHHHHHHHHHhcCCCEEEECCccccch--hhH-HHHHHHHHHh--cC
Confidence 6999999998632210 112345677777788999999999988643 122 2233333221 46
Q ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceE-EEeeCCCCCCCCCcceeE
Q 015367 143 LPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYD-LRVYGPPGSHLANSSILN 221 (408)
Q Consensus 143 ~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~-~~v~~~~~~~~~~~~~~~ 221 (408)
.|+++|+||||+.......++.+. . ............. .+. + .+.|.+.|+ ++. +............+
T Consensus 62 ~pv~~v~GNHD~~~~~~~~~~~~~---~--~~~~l~~~~~~~~---~~~-~-~~ig~~gw~d~~~-~~~~~~~~~~~~~~ 130 (239)
T TIGR03729 62 IKVTFNAGNHDMLKDLTYEEIESN---D--SPLYLHNRFIDIP---NTQ-W-RIIGNNGWYDYSF-SNDKTSKEILRWKK 130 (239)
T ss_pred CcEEEECCCCCCCCCCCHHHHHhc---c--chhhhcccccccC---CCc-e-EEEeeccceeccc-ccccCHHHHHHhhh
Confidence 899999999998644433322211 0 0000000000000 000 0 111211111 110 00000000000000
Q ss_pred EEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCcccc-ccCCcccccccc
Q 015367 222 LFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQL-YYQNIVGQFQEA 300 (408)
Q Consensus 222 ~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~-~~~~~~g~~~e~ 300 (408)
-+..++.. ......+.+.++|++||++.|+++ ..+++||++||||...... .... ..+..
T Consensus 131 d~~~~~~~----~~~~~~~~~~~~~l~~l~~~l~~~------------~~~~~ivvtH~pP~~~~~~~~~~~--~~~~~- 191 (239)
T TIGR03729 131 SFWFDRRI----KRPMSDPERTAIVLKQLKKQLNQL------------DNKQVIFVTHFVPHRDFIYVPMDH--RRFDM- 191 (239)
T ss_pred cEEeeccc----CCCCChHHHHHHHHHHHHHHHHhc------------CCCCEEEEEcccchHHHhcCCCCC--cchhh-
Confidence 01222211 000134568899999999998765 3578999999988531110 0000 00000
Q ss_pred cccCCCC-hHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEe
Q 015367 301 VACSRVN-SGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYG 345 (408)
Q Consensus 301 ~~~~~~~-~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~ 345 (408)
..+..+ +.+.+.+.++ +|++++|||.|........+|+.++..
T Consensus 192 -~~~~~~s~~l~~li~~~-~v~~~i~GH~H~~~~~~~i~~~~~~~~ 235 (239)
T TIGR03729 192 -FNAFLGSQHFGQLLVKY-EIKDVIFGHLHRRFGPLTIGGTTYHNR 235 (239)
T ss_pred -hhhccChHHHHHHHHHh-CCCEEEECCccCCCCCEEECCEEEEec
Confidence 001234 4566666666 799999999999422334578877654
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=161.97 Aligned_cols=132 Identities=18% Similarity=0.159 Sum_probs=84.1
Q ss_pred HHHHHHHcCCCEEEEcCCcCCCCCccc------HHHHHHHHHhhhHhcCCCEEEEcCCCCCCCCC--CHHHHHHHHHHcc
Q 015367 100 LKRIIEAEKPDFIAFTGDNIFGSSTTD------VAESMIQAFGPAMELGLPWAAVLGNHDQESTM--DREELMYFISLMD 171 (408)
Q Consensus 100 ~~~~i~~~~pD~vv~~GDli~~~~~~~------~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~--~~~~~~~~~~~~~ 171 (408)
...++...+||+||++||+++.+.... ++..+.+.+.+ .....|+++||||||..... .......|.+
T Consensus 37 ~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~-~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~--- 112 (257)
T cd08163 37 WRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDP-SPGRKMVESLPGNHDIGFGNGVVLPVRQRFEK--- 112 (257)
T ss_pred HHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcC-CCccceEEEeCCCcccCCCCCCCHHHHHHHHH---
Confidence 334445679999999999987654311 12333444332 12247999999999985432 1122222222
Q ss_pred CCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHH
Q 015367 172 YSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLH 251 (408)
Q Consensus 172 ~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~ 251 (408)
.+|..+|.+.+.+ ++|++|||..... ...+.+..+|++||+
T Consensus 113 ------------------------~Fg~~~~~~~~~~-----------~~fV~Lds~~l~~----~~~~~~~~~~~~~l~ 153 (257)
T cd08163 113 ------------------------YFGPTSRVIDVGN-----------HTFVILDTISLSN----KDDPDVYQPPREFLH 153 (257)
T ss_pred ------------------------HhCCCceEEEECC-----------EEEEEEccccccC----CcccccchhHHHHHH
Confidence 2233456665543 6799999964321 124568889999999
Q ss_pred HHHHHHhhhhcccccccCCCCCeEEEecCCCCCc
Q 015367 252 RVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPET 285 (408)
Q Consensus 252 ~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~ 285 (408)
+.++... ...++||++|||++..
T Consensus 154 ~~l~~~~-----------~~~p~ILl~H~Plyr~ 176 (257)
T cd08163 154 SFSAMKV-----------KSKPRILLTHVPLYRP 176 (257)
T ss_pred hhhhccC-----------CCCcEEEEeccccccC
Confidence 9876542 5789999999999753
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.9e-18 Score=161.76 Aligned_cols=250 Identities=14% Similarity=0.126 Sum_probs=140.3
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc-----ccHHHHHHHH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST-----TDVAESMIQA 134 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~-----~~~~~~~~~~ 134 (408)
+.++|+.+.|.--+... .....+.|.++.++.++||||.+||.+ ..+. +.....|.+.
T Consensus 25 ~~l~F~~vGDwG~g~~~----------------Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~v 87 (394)
T PTZ00422 25 AQLRFASLGNWGTGSKQ----------------QKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENV 87 (394)
T ss_pred CeEEEEEEecCCCCchh----------------HHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhhh
Confidence 46899999998643211 223345666777788999999999987 3332 1122334555
Q ss_pred HhhhHh--cCCCEEEEcCCCCCCCCCCHHHHHHHHHH---------ccCCcc-ccCCCCCCCcccccCCccccccCccce
Q 015367 135 FGPAME--LGLPWAAVLGNHDQESTMDREELMYFISL---------MDYSVA-QVNPPAEDPSNLAKGGVMEKIDGFGNY 202 (408)
Q Consensus 135 l~~~~~--~~~p~~~v~GNHD~~~~~~~~~~~~~~~~---------~~~~~~-~~~p~~~~~~~~~~~~~~~~~~g~~~y 202 (408)
... .. ..+|||.|+||||+.++...+ +....+. ..++.. ...| . +.+-.-+|
T Consensus 88 Y~~-~s~~L~~Pwy~vLGNHDy~Gn~~AQ-i~r~~~~y~~~~~~~~~~y~~~~~~~~--------R------W~mP~~yY 151 (394)
T PTZ00422 88 YSE-ESGDMQIPFFTVLGQADWDGNYNAE-LLKGQNVYLNGHGQTDIEYDSNNDIYP--------K------WIMPNYWY 151 (394)
T ss_pred ccC-cchhhCCCeEEeCCcccccCCchhh-hccccccccccccccccccccccccCC--------C------ccCCchhh
Confidence 543 23 578999999999997664332 2111000 000000 0001 0 11111233
Q ss_pred EE--EeeCCC----CCCCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEE
Q 015367 203 DL--RVYGPP----GSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLA 276 (408)
Q Consensus 203 ~~--~v~~~~----~~~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv 276 (408)
.+ ...... .........+.|+++||......- .+....++|++||+++|+... +...++||
T Consensus 152 ~~~~~f~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~---~~~~~~~~~w~~L~~~L~~a~----------k~a~WkIV 218 (394)
T PTZ00422 152 HYFTHFTDTSGPSLLKSGHKDMSVAFIFIDTWILSSSF---PYKKVSERAWQDLKATLEYAP----------KIADYIIV 218 (394)
T ss_pred eeeeeeecccccccccccCCCCEEEEEEEECchhcccC---CccccCHHHHHHHHHHHHhhc----------cCCCeEEE
Confidence 22 110000 000011234789999997543211 122357889999999986542 24579999
Q ss_pred EecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCC-
Q 015367 277 FFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGK- 355 (408)
Q Consensus 277 ~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~- 355 (408)
+.|||+++........ .....++..|.++ +|+++++||+|..++. ..+|+.++.+|+.|....+.
T Consensus 219 vGHhPIySsG~hg~~~------------~L~~~L~PLL~ky-~VdlYisGHDH~lq~i-~~~gt~yIvSGaGs~~~~~~~ 284 (394)
T PTZ00422 219 VGDKPIYSSGSSKGDS------------YLSYYLLPLLKDA-QVDLYISGYDRNMEVL-TDEGTAHINCGSGGNSGRKSI 284 (394)
T ss_pred EecCceeecCCCCCCH------------HHHHHHHHHHHHc-CcCEEEEccccceEEe-cCCCceEEEeCccccccCCCC
Confidence 9999999754321110 0112455555555 6999999999987664 45788887777655322211
Q ss_pred --------CCCCCceEEEEEec
Q 015367 356 --------AGWPRRARIILAEA 369 (408)
Q Consensus 356 --------~~~~~g~rv~~i~~ 369 (408)
.....|+-.++++.
T Consensus 285 ~~~~~s~F~~~~~GF~~~~l~~ 306 (394)
T PTZ00422 285 MKNSKSLFYSEDIGFCIHELNA 306 (394)
T ss_pred CCCCCcceecCCCCEEEEEEec
Confidence 01235777777763
|
|
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-17 Score=155.73 Aligned_cols=108 Identities=21% Similarity=0.216 Sum_probs=73.8
Q ss_pred HHHHHHHHhhhhc-eeeccccccccCCCCCCccccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHH
Q 015367 24 AIIFFVDKQILQK-LQISHDKIHLKKYPDLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKR 102 (408)
Q Consensus 24 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (408)
+.++.|+..++++ ++++++++.. +|..+ +++||+++||+|++.... ...++++.+
T Consensus 19 ~~~~~~~~~~e~~~~~v~~~~i~~-----~~~~~---~~~rI~~lSDlH~~~~~~----------------~~~l~~~v~ 74 (271)
T PRK11340 19 SSGFGYMHYWEPGWFELIRHRLAF-----FKDNA---APFKILFLADLHYSRFVP----------------LSLISDAIA 74 (271)
T ss_pred HhHhhHHhhhcCceEEEEEEEccC-----CCCCC---CCcEEEEEcccCCCCcCC----------------HHHHHHHHH
Confidence 4456666667766 5688888862 12222 369999999999875421 123466778
Q ss_pred HHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCCCC
Q 015367 103 IIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 103 ~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
.+++++||+|+++||+++.... ...+.+.+.++.+ ....|+|+|+||||+...
T Consensus 75 ~i~~~~pDlVli~GD~~d~~~~-~~~~~~~~~L~~L-~~~~pv~~V~GNHD~~~~ 127 (271)
T PRK11340 75 LGIEQKPDLILLGGDYVLFDMP-LNFSAFSDVLSPL-AECAPTFACFGNHDRPVG 127 (271)
T ss_pred HHHhcCCCEEEEccCcCCCCcc-ccHHHHHHHHHHH-hhcCCEEEecCCCCcccC
Confidence 8888999999999998863322 2234455566654 446899999999998643
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-17 Score=146.49 Aligned_cols=185 Identities=17% Similarity=0.171 Sum_probs=105.4
Q ss_pred EEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCC
Q 015367 64 ILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGL 143 (408)
Q Consensus 64 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~ 143 (408)
|+++||+|..... ++. ..+++.+||+||++||+++... .+.+..+ +. +...+.
T Consensus 1 i~~~sD~H~~~~~--------------------~~~--~~~~~~~~D~vv~~GDl~~~~~-~~~~~~~-~~---l~~~~~ 53 (188)
T cd07392 1 ILAISDIHGDVEK--------------------LEA--IILKAEEADAVIVAGDITNFGG-KEAAVEI-NL---LLAIGV 53 (188)
T ss_pred CEEEEecCCCHHH--------------------HHH--HHhhccCCCEEEECCCccCcCC-HHHHHHH-HH---HHhcCC
Confidence 6899999975321 122 4456789999999999876543 2233333 33 345589
Q ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeEEE
Q 015367 144 PWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLF 223 (408)
Q Consensus 144 p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~~i 223 (408)
|+++|+||||... ..+... +.. . ...+ ..+.+. .+.++
T Consensus 54 p~~~v~GNHD~~~------~~~~~~--~~~---~-----------------~~~~---~~~~~~-----------~~~~~ 91 (188)
T cd07392 54 PVLAVPGNCDTPE------ILGLLT--SAG---L-----------------NLHG---KVVEVG-----------GYTFV 91 (188)
T ss_pred CEEEEcCCCCCHH------HHHhhh--cCc---E-----------------ecCC---CEEEEC-----------CEEEE
Confidence 9999999999732 111100 000 0 0111 122221 25688
Q ss_pred EEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccccccccc
Q 015367 224 FLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVAC 303 (408)
Q Consensus 224 ~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~ 303 (408)
.+++...... ...+.++++|++|+ +.+.. ...++.|+++|+||... +.+.....
T Consensus 92 g~~~~~~~~~---~~~~~~~~~~l~~~-~~l~~------------~~~~~~ilv~H~pp~~~---~~d~~~~~------- 145 (188)
T cd07392 92 GIGGSNPTPF---NTPIELSEEEIVSD-GRLNN------------LLAKNLILVTHAPPYGT---AVDRVSGG------- 145 (188)
T ss_pred EeCCCCCCCC---CCccccCHHHHHHh-hhhhc------------cCCCCeEEEECCCCcCC---cccccCCC-------
Confidence 8887432111 12456889999998 33322 24678999999999652 11111100
Q ss_pred CCCC-hHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEE
Q 015367 304 SRVN-SGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCY 344 (408)
Q Consensus 304 ~~~~-~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~ 344 (408)
...+ ..+.+.+.+. +++++||||.|........++.++++
T Consensus 146 ~~~g~~~l~~li~~~-~~~~~l~GH~H~~~~~~~~~~~~~~n 186 (188)
T cd07392 146 FHVGSKAIRKFIEER-QPLLCICGHIHESRGVDKIGNTLVVN 186 (188)
T ss_pred CccCCHHHHHHHHHh-CCcEEEEeccccccceeeeCCeEEec
Confidence 0123 3455555555 58999999999942233455655544
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-17 Score=148.73 Aligned_cols=225 Identities=23% Similarity=0.249 Sum_probs=124.5
Q ss_pred CCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc-----HHHHHH
Q 015367 58 YDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD-----VAESMI 132 (408)
Q Consensus 58 ~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~-----~~~~~~ 132 (408)
+|++++|+++.|.-...... .......+.++-+..+.|||+-+||.++..+..+ ..+.|.
T Consensus 40 ~dgslsflvvGDwGr~g~~n---------------qs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~ 104 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGSFN---------------QSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFE 104 (336)
T ss_pred CCCceEEEEEcccccCCchh---------------HHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhh
Confidence 56899999999986222110 1111223444445689999999999998776422 233344
Q ss_pred HHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCC
Q 015367 133 QAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGS 212 (408)
Q Consensus 133 ~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~ 212 (408)
++... .....|||.|+||||+.++...+ +...++... ..++.|..+ -.....++....+
T Consensus 105 nIYT~-pSLQkpWy~vlGNHDyrGnV~AQ-ls~~l~~~d--~RW~c~rsf---------------~~~ae~ve~f~v~-- 163 (336)
T KOG2679|consen 105 NIYTA-PSLQKPWYSVLGNHDYRGNVEAQ-LSPVLRKID--KRWICPRSF---------------YVDAEIVEMFFVD-- 163 (336)
T ss_pred hcccC-cccccchhhhccCccccCchhhh-hhHHHHhhc--cceecccHH---------------hhcceeeeeeccc--
Confidence 43332 24567999999999999876543 232222221 112222110 0000001111000
Q ss_pred CCCCcceeEEEEEeCC-----CCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccc
Q 015367 213 HLANSSILNLFFLDSG-----DRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQ 287 (408)
Q Consensus 213 ~~~~~~~~~~i~LDS~-----~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~ 287 (408)
...+++|+- ......+....-.+-..++.||+..|++. ..+++||..|||+.+...
T Consensus 164 -------~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S------------~a~wkiVvGHh~i~S~~~ 224 (336)
T KOG2679|consen 164 -------TTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKAS------------RAKWKIVVGHHPIKSAGH 224 (336)
T ss_pred -------cccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHHh------------hcceEEEecccceehhhc
Confidence 111222221 00000011111224578899999998876 468999999999986543
Q ss_pred cccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccC-CCCeEEEEeCCcCC
Q 015367 288 LYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGN-LNGIWFCYGGGIGY 350 (408)
Q Consensus 288 ~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~-~~gi~~~~~~~sg~ 350 (408)
.+ ...| ...+++..|.+. +|+++++||+|..+.... .+||+++..|+...
T Consensus 225 HG------~T~e------L~~~LlPiL~~n-~VdlY~nGHDHcLQhis~~e~~iqf~tSGagSk 275 (336)
T KOG2679|consen 225 HG------PTKE------LEKQLLPILEAN-GVDLYINGHDHCLQHISSPESGIQFVTSGAGSK 275 (336)
T ss_pred cC------ChHH------HHHHHHHHHHhc-CCcEEEecchhhhhhccCCCCCeeEEeeCCccc
Confidence 32 2111 123455556555 699999999998765544 57898887765543
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-16 Score=152.76 Aligned_cols=133 Identities=16% Similarity=0.155 Sum_probs=79.7
Q ss_pred eEEEEEeCCCCCCcCC--cCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCc-cccccCCccc-
Q 015367 220 LNLFFLDSGDRETVRG--VRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPET-PQLYYQNIVG- 295 (408)
Q Consensus 220 ~~~i~LDS~~~~~~~~--~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~-~~~~~~~~~g- 295 (408)
+++|+|||..+....+ ....|.++++|++||+++|++.. ...+.+|++|||+... ....+.....
T Consensus 305 lrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-----------a~~p~VVV~hHpPi~t~gi~~md~w~~~ 373 (492)
T TIGR03768 305 LKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-----------ADGQLMIIAAHIPIAVSPIGSEMEWWLG 373 (492)
T ss_pred eEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-----------CCCceEEEEeCCCcccCCccchhhhccc
Confidence 4899999976432211 12568899999999999998763 3456566655544432 2211111110
Q ss_pred cc--ccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCC---------CCeEEEEeCCcCCCCCCCCCCCCceEE
Q 015367 296 QF--QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNL---------NGIWFCYGGGIGYHGYGKAGWPRRARI 364 (408)
Q Consensus 296 ~~--~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~---------~gi~~~~~~~sg~~~~~~~~~~~g~rv 364 (408)
.. .+.........++++.|.++++|.++||||.|.+. ...+ .|.|.+.+. ...+++.-+|+
T Consensus 374 ~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~-v~a~~~p~~~~pe~gFWeveTa-------Sl~DfPQq~R~ 445 (492)
T TIGR03768 374 AADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT-VKAFPSPDPARPEYGFWQVETA-------SLRDFPQQFRT 445 (492)
T ss_pred cccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc-ccccCCCCCCCCcCceEEEeeh-------hhccchhhceE
Confidence 00 01111011224788899999999999999999853 2221 234443332 12478899999
Q ss_pred EEEecCC
Q 015367 365 ILAEAGK 371 (408)
Q Consensus 365 ~~i~~~~ 371 (408)
|||.-+.
T Consensus 446 ~Ei~~n~ 452 (492)
T TIGR03768 446 FEIYLNS 452 (492)
T ss_pred EEEEeCC
Confidence 9998543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-17 Score=144.03 Aligned_cols=79 Identities=32% Similarity=0.450 Sum_probs=53.1
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|||+++||+|++..... . ....+.......+||+||++||+++.....................
T Consensus 1 ~ri~~isD~H~~~~~~~---------------~-~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 64 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDS---------------D-AFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNP 64 (200)
T ss_dssp EEEEEEEBBTTTHHHHC---------------H-HHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEcCCCCCCcchh---------------H-HHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhc
Confidence 79999999999865320 1 1245566667789999999999987765322222111012233567
Q ss_pred CCCEEEEcCCCCCCC
Q 015367 142 GLPWAAVLGNHDQES 156 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~ 156 (408)
..|+++++||||+..
T Consensus 65 ~~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 65 KIPVYFILGNHDYYS 79 (200)
T ss_dssp TTTEEEEE-TTSSHH
T ss_pred cccccccccccccce
Confidence 899999999999964
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=144.68 Aligned_cols=90 Identities=27% Similarity=0.368 Sum_probs=60.9
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc-ccHHHHHHHHHhhhHhc
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST-TDVAESMIQAFGPAMEL 141 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~-~~~~~~~~~~l~~~~~~ 141 (408)
||+|+||+|++......... ........+++.+.+.+++.+||+||++||+++.... ......+.+.+..+...
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRD-----RRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEA 75 (223)
T ss_pred CeEEeccccCCccccCcCcc-----cchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHC
Confidence 69999999999754321000 0001123456677777788899999999999876542 22345556666654446
Q ss_pred CCCEEEEcCCCCCCCC
Q 015367 142 GLPWAAVLGNHDQEST 157 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~~ 157 (408)
++|+++++||||....
T Consensus 76 ~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 76 GIPVFIIAGNHDSPSR 91 (223)
T ss_pred CCCEEEecCCCCCccc
Confidence 8999999999998754
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-17 Score=140.81 Aligned_cols=68 Identities=21% Similarity=0.148 Sum_probs=44.3
Q ss_pred EEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCC
Q 015367 64 ILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGL 143 (408)
Q Consensus 64 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~ 143 (408)
|+++||+|++..... ..+.+.+.+.+||+|+++||+++.... ..... +........
T Consensus 1 ~~~iSDlH~~~~~~~-------------------~~~~~~~~~~~~d~li~~GDi~~~~~~-~~~~~----~~~~~~~~~ 56 (166)
T cd07404 1 IQYLSDLHLEFEDNL-------------------ADLLNFPIAPDADILVLAGDIGYLTDA-PRFAP----LLLALKGFE 56 (166)
T ss_pred CceEccccccCcccc-------------------ccccccCCCCCCCEEEECCCCCCCcch-HHHHH----HHHhhcCCc
Confidence 579999998764321 112133456789999999998765432 11111 122245578
Q ss_pred CEEEEcCCCCCC
Q 015367 144 PWAAVLGNHDQE 155 (408)
Q Consensus 144 p~~~v~GNHD~~ 155 (408)
|+++|+||||+.
T Consensus 57 ~v~~v~GNHD~~ 68 (166)
T cd07404 57 PVIYVPGNHEFY 68 (166)
T ss_pred cEEEeCCCcceE
Confidence 999999999985
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.2e-15 Score=127.98 Aligned_cols=79 Identities=27% Similarity=0.293 Sum_probs=53.3
Q ss_pred EEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCC
Q 015367 64 ILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGL 143 (408)
Q Consensus 64 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~ 143 (408)
|+|+||+|++........ .....++.+.+.+++.+||+|+++||+++... .+.+..+.+.++.+.....
T Consensus 1 il~isD~Hl~~~~~~~~~----------~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~~~~l~~~~~ 69 (144)
T cd07400 1 ILHLSDLHFGPERKPELL----------ALLSLLDRLLAEIKALDPDLVVITGDLTQRGL-PEEFEEAREFLDALPAPLE 69 (144)
T ss_pred CeEeCccCCCCCcchhHH----------HHHHHHHHHHHHHhccCCCEEEECCCCCCCCC-HHHHHHHHHHHHHccccCC
Confidence 689999999976532100 00111345677777889999999999886654 3445556666665432236
Q ss_pred CEEEEcCCCC
Q 015367 144 PWAAVLGNHD 153 (408)
Q Consensus 144 p~~~v~GNHD 153 (408)
|+++|+||||
T Consensus 70 ~~~~v~GNHD 79 (144)
T cd07400 70 PVLVVPGNHD 79 (144)
T ss_pred cEEEeCCCCe
Confidence 9999999998
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-14 Score=128.53 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=50.2
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
..||+.+||+|-. ...++.+.+.+++.++|+||++||+++.....+.+..+.+ .+..
T Consensus 4 ~~kIl~iSDiHgn--------------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~---~l~~ 60 (224)
T cd07388 4 VRYVLATSNPKGD--------------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFR---ILGE 60 (224)
T ss_pred eeEEEEEEecCCC--------------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHH---HHHh
Confidence 4799999999932 1345667676677899999999998765422333333333 3334
Q ss_pred cCCCEEEEcCCCCC
Q 015367 141 LGLPWAAVLGNHDQ 154 (408)
Q Consensus 141 ~~~p~~~v~GNHD~ 154 (408)
.+.|+++|+||||.
T Consensus 61 l~~pv~~V~GNhD~ 74 (224)
T cd07388 61 AHLPTFYVPGPQDA 74 (224)
T ss_pred cCCceEEEcCCCCh
Confidence 47899999999996
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-14 Score=131.97 Aligned_cols=79 Identities=32% Similarity=0.368 Sum_probs=58.0
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
++||+++||+|++.... ...++.+.+.+++.+||+|+++||+++...... ..+.+.++. +.
T Consensus 1 ~~~i~~~sDlH~~~~~~----------------~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~-l~ 61 (223)
T cd07385 1 GLRIAHLSDLHLGPFVS----------------RERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKK-LK 61 (223)
T ss_pred CCEEEEEeecCCCccCC----------------HHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhc-cC
Confidence 48999999999986532 123567777888889999999999887654321 344455544 34
Q ss_pred cCCCEEEEcCCCCCCCCC
Q 015367 141 LGLPWAAVLGNHDQESTM 158 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~~~ 158 (408)
...|+++++||||+....
T Consensus 62 ~~~~v~~v~GNHD~~~~~ 79 (223)
T cd07385 62 APLGVYAVLGNHDYYSGD 79 (223)
T ss_pred CCCCEEEECCCcccccCc
Confidence 578999999999997653
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.5e-14 Score=139.17 Aligned_cols=294 Identities=18% Similarity=0.173 Sum_probs=158.4
Q ss_pred cccCCCCeEEEEEeccCcCCCCc----c------ccCcc---------ccccccc---c-CChHHHHHHHHHHHH-c-CC
Q 015367 55 RFRYDGTFKILQVADMHYGMGKV----T------RCRDV---------TATEFKY---C-SDLNTTRFLKRIIEA-E-KP 109 (408)
Q Consensus 55 ~~~~~~~~ri~~iSDlH~~~~~~----~------~~~~~---------~~~~~~~---~-~~~~~~~~~~~~i~~-~-~p 109 (408)
...++..+||+||||+|...... . .||.- ...-|+. | ....+++.+.+.|++ . ++
T Consensus 132 p~~~~p~~rvlhltDiH~D~~Y~~gs~a~c~~p~ccr~s~~~p~~~~~~Ag~wG~y~~CD~P~~lies~L~~ike~~~~i 211 (577)
T KOG3770|consen 132 PLKNNPTFRVLHLTDIHLDPDYSEGSDADCDCPMCCRNSDGTPSGTKVAAGPWGDYGKCDSPKRLIESALDHIKENHKDI 211 (577)
T ss_pred CCCCCCceeEEEeeccccCcccccCCcccccCccccccCCCCCCCccccCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 33334569999999999975431 1 12211 1122433 3 445566666666665 3 48
Q ss_pred CEEEEcCCcCCCCCccc----H---HHHHHHHHhhhHhcCCCEEEEcCCCCCCCC-------CCHHH----H-HHHHHHc
Q 015367 110 DFIAFTGDNIFGSSTTD----V---AESMIQAFGPAMELGLPWAAVLGNHDQEST-------MDREE----L-MYFISLM 170 (408)
Q Consensus 110 D~vv~~GDli~~~~~~~----~---~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~-------~~~~~----~-~~~~~~~ 170 (408)
|+|+.|||.+....... . ...+.+.+... -.++|+|...||||.... ..... + ..+...+
T Consensus 212 D~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~-FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~~wly~~~~~~W 290 (577)
T KOG3770|consen 212 DYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEY-FPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQLWLYKHLAGAW 290 (577)
T ss_pred CEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHh-CCCCceeeecccCCCCcHhhcCCCCCcchhhhhHHHHHHHhhh
Confidence 99999999887653211 1 12222222221 248999999999998642 11110 0 0111111
Q ss_pred cCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeEEEEEeCCCCCCcCCc-CcCCCCcHHHHHH
Q 015367 171 DYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGV-RTYGYIKESQLRW 249 (408)
Q Consensus 171 ~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~~i~LDS~~~~~~~~~-~~~g~i~~~Ql~W 249 (408)
. ..-|.. ..+.+...++|...+. .++++|.||+......... -....-..+|++|
T Consensus 291 ~----~wlp~e----------~~~t~~kga~Y~~~~~----------~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqW 346 (577)
T KOG3770|consen 291 S----TWLPAE----------AKETFLKGAYYLVLVI----------DGLRLISLNTNYCSAPNFWLYANQTDPIDQLQW 346 (577)
T ss_pred h----ccCCHH----------HHhhhhcCcEEEEeec----------CCceEEEeccccccccceeeeecCCCchHHhhH
Confidence 1 111110 0002222345665544 2578999999753322211 1123346778999
Q ss_pred HHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcC-CeEEEEeccC
Q 015367 250 LHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLG-DIKAVFVGHD 328 (408)
Q Consensus 250 L~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~-~V~~v~~GH~ 328 (408)
|..+|++++ .++..+-++.|+|+..... .++ -...+...+.++. .|...|.||.
T Consensus 347 f~~~L~~ae----------~~GekVhil~HIPpG~~~c----------~~~-----ws~~f~~iv~r~~~tI~gqf~GH~ 401 (577)
T KOG3770|consen 347 FVDQLQEAE----------SAGEKVHILGHIPPGDGVC----------LEG-----WSINFYRIVNRFRSTIAGQFYGHT 401 (577)
T ss_pred HHHHHHHHH----------hcCCEEEEEEeeCCCCcch----------hhh-----hhHHHHHHHHHHHHhhhhhccccC
Confidence 999999987 3588899999999974211 010 1123444444443 4688999999
Q ss_pred CCCCcccCCCC---eEEEEeC-CcCCCCCCCCCCCCceEEEEEecCCCCCCccccceeEEEEEccCCCCCcccceeeecc
Q 015367 329 HTNDFCGNLNG---IWFCYGG-GIGYHGYGKAGWPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEM 404 (408)
Q Consensus 329 H~n~~~~~~~g---i~~~~~~-~sg~~~~~~~~~~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~~~ 404 (408)
|.+++...++- ..+..+. +++...|- ..-+++|++.++.. +.++ +-++.||+++-.....-- +++-|+.
T Consensus 402 h~d~f~v~yde~~~~p~~v~~i~~svtty~--~~~p~yr~y~~~~~---~~~~-~~d~~ty~~Nlt~an~~~-e~p~W~~ 474 (577)
T KOG3770|consen 402 HIDEFRVFYDEETGHPIAVAYIGPSVTTYY--NKNPGYRIYAVDST---ISFS-VPDHRTYFYNLTSANLQP-ESPEWEL 474 (577)
T ss_pred cceeEEEEeccccCCceeeeeccccceehh--ccCCCceecccCcc---ccee-cccceEEEEehhhhcCCC-CCCchHh
Confidence 99887654432 1211111 11111121 23579999999821 1122 467889988644321111 5555554
Q ss_pred C
Q 015367 405 C 405 (408)
Q Consensus 405 ~ 405 (408)
+
T Consensus 475 ~ 475 (577)
T KOG3770|consen 475 L 475 (577)
T ss_pred h
Confidence 3
|
|
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.4e-14 Score=133.18 Aligned_cols=112 Identities=25% Similarity=0.295 Sum_probs=73.1
Q ss_pred HHHHHHHHhhhhc-eeeccccccccCCCCCCccccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHH
Q 015367 24 AIIFFVDKQILQK-LQISHDKIHLKKYPDLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKR 102 (408)
Q Consensus 24 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (408)
.+.+.++..+++. +.+..+++.. ++.+..+ .++||+|+||+|+..... ...+.+ .
T Consensus 12 ~~~~~~~~~~~~~~l~~~~~~i~~---~~~~~~~---~~~~iv~lSDlH~~~~~~-----------------~~~~~~-~ 67 (284)
T COG1408 12 IALASYAHLLEPGWLRVVKLTILT---PKLPASL---QGLKIVQLSDLHSLPFRE-----------------EKLALL-I 67 (284)
T ss_pred HHHHHHHHhcccceEEEEEEEeec---CCCCccc---CCeEEEEeehhhhchhhH-----------------HHHHHH-H
Confidence 3444444555555 3455555543 2234344 379999999999986541 122333 4
Q ss_pred HHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHH
Q 015367 103 IIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDRE 161 (408)
Q Consensus 103 ~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~ 161 (408)
.+..+.||+|++|||+++... ......+.+.+++ +.++.|+|+|.||||+.....+.
T Consensus 68 ~i~~~~~DlivltGD~~~~~~-~~~~~~~~~~L~~-L~~~~gv~av~GNHd~~~~~~~~ 124 (284)
T COG1408 68 AIANELPDLIVLTGDYVDGDR-PPGVAALALFLAK-LKAPLGVFAVLGNHDYGVDRSNV 124 (284)
T ss_pred HHHhcCCCEEEEEeeeecCCC-CCCHHHHHHHHHh-hhccCCEEEEecccccccccccc
Confidence 445567799999999998522 2345666667776 57789999999999998765443
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.4e-12 Score=124.41 Aligned_cols=90 Identities=23% Similarity=0.363 Sum_probs=59.0
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcc-cHHHHHHHHHhh-
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTT-DVAESMIQAFGP- 137 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~-~~~~~~~~~l~~- 137 (408)
+.+||+|+||+|+|.......+. .....+++.+.+.+.+++||+||++||+++..... .....+.+.++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~--------~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~ 73 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRG--------DDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLY 73 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhh--------hhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHh
Confidence 47999999999999643221111 01134567777777889999999999988765432 122222333322
Q ss_pred --------------------------------hHhcCCCEEEEcCCCCCCCC
Q 015367 138 --------------------------------AMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 138 --------------------------------~~~~~~p~~~v~GNHD~~~~ 157 (408)
.+..++|+|+|.||||....
T Consensus 74 ~~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~~ 125 (405)
T TIGR00583 74 CLGDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPSG 125 (405)
T ss_pred hccCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCccc
Confidence 00147999999999999654
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.9e-12 Score=113.46 Aligned_cols=66 Identities=30% Similarity=0.373 Sum_probs=45.4
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
+||+++||+|..... ...+.+++.+||+|+++||+++.. ..+.+.+ .+.
T Consensus 1 ~rIa~isDiHg~~~~----------------------~~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l---~~l 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL----------------------EDIKALHLLQPDLVLFVGDFGNES------VQLVRAI---SSL 49 (238)
T ss_pred CEEEEEecCCCCchH----------------------HHHHHHhccCCCEEEECCCCCcCh------HHHHHHH---HhC
Confidence 589999999954221 123466778999999999986421 2222222 234
Q ss_pred CCCEEEEcCCCCCCCCC
Q 015367 142 GLPWAAVLGNHDQESTM 158 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~~~ 158 (408)
+.|+++|+||||++...
T Consensus 50 ~~p~~~V~GNHD~~~~~ 66 (238)
T cd07397 50 PLPKAVILGNHDAWYDA 66 (238)
T ss_pred CCCeEEEcCCCcccccc
Confidence 68999999999997653
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-11 Score=119.43 Aligned_cols=86 Identities=21% Similarity=0.202 Sum_probs=57.4
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc--HHHHHHH-HHhhh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD--VAESMIQ-AFGPA 138 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~-~l~~~ 138 (408)
|||+|+||+|+|....... ... .....++++.+.+.+.+||+|+++||+++...... ....+.+ .+..+
T Consensus 1 MKilhiSD~HLG~~~~~~~---~~~-----~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L 72 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPW---FQN-----YQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLL 72 (340)
T ss_pred CeEEEEeeecCCCcCCChh---hHH-----HHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 6999999999996542210 000 01234567777778899999999999987753222 2222333 34444
Q ss_pred HhcCCCEEEEcCCCCCC
Q 015367 139 MELGLPWAAVLGNHDQE 155 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~ 155 (408)
.+.++|+++++||||..
T Consensus 73 ~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 73 KEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHCCCeEEEEccCCCcc
Confidence 45689999999999974
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-11 Score=122.34 Aligned_cols=88 Identities=23% Similarity=0.280 Sum_probs=58.6
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHH-HHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVA-ESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~-~~~~~~l~~~~~ 140 (408)
|||+|+||+|+|....+..+. . .....++++.+.+++.+||+||++||+++........ ..+.+.+..+..
T Consensus 1 mkilh~SDlHlG~~~~~~~~~---~-----~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~ 72 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRA---A-----EHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ 72 (407)
T ss_pred CEEEEEcccCCCCcccCcccH---H-----HHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh
Confidence 699999999998643221000 0 0112246677888889999999999988765432222 334455555555
Q ss_pred cCCCEEEEcCCCCCCCC
Q 015367 141 LGLPWAAVLGNHDQEST 157 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~~ 157 (408)
.++|+++|+||||....
T Consensus 73 ~~~~v~~I~GNHD~~~~ 89 (407)
T PRK10966 73 TGCQLVVLAGNHDSVAT 89 (407)
T ss_pred cCCcEEEEcCCCCChhh
Confidence 68999999999998643
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.5e-13 Score=114.51 Aligned_cols=74 Identities=19% Similarity=0.163 Sum_probs=49.9
Q ss_pred CCCeEEEecCCCCCccccccCCcccccccccccCCCChH-HHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcC
Q 015367 271 QLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSG-VLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIG 349 (408)
Q Consensus 271 ~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~-~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg 349 (408)
....++++|.++.... .... +...+. ..+++++++||.|.. .....+|+.+++.|+.+
T Consensus 80 ~~~~i~~~H~~~~~~~-------------------~~~~~~~~~~~-~~~~~~~~~GH~H~~-~~~~~~~~~~~~~Gs~~ 138 (156)
T PF12850_consen 80 DGFKILLSHGHPYDVQ-------------------WDPAELREILS-RENVDLVLHGHTHRP-QVFKIGGIHVINPGSIG 138 (156)
T ss_dssp TTEEEEEESSTSSSST-------------------TTHHHHHHHHH-HTTSSEEEESSSSSE-EEEEETTEEEEEE-GSS
T ss_pred cCCeEEEECCCCcccc-------------------cChhhhhhhhc-ccCCCEEEcCCcccc-eEEEECCEEEEECCcCC
Confidence 3568999999776421 1122 334444 456999999999994 44557899999888877
Q ss_pred CCCCCCCCCCCceEEEEEe
Q 015367 350 YHGYGKAGWPRRARIILAE 368 (408)
Q Consensus 350 ~~~~~~~~~~~g~rv~~i~ 368 (408)
....+ + ++++-+++++
T Consensus 139 ~~~~~--~-~~~~~i~~~~ 154 (156)
T PF12850_consen 139 GPRHG--D-QSGYAILDIE 154 (156)
T ss_dssp S-SSS--S-SEEEEEEEET
T ss_pred CCCCC--C-CCEEEEEEEe
Confidence 65443 2 6789998886
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.3e-11 Score=106.03 Aligned_cols=85 Identities=20% Similarity=0.257 Sum_probs=51.1
Q ss_pred EEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc--HHHHHHHHHhhhHh--
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD--VAESMIQAFGPAME-- 140 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~~l~~~~~-- 140 (408)
++|||+|++....... ...+. .+....+.+.+++++.+||+|+++||+++...... .+..+...+..+..
T Consensus 1 ~~isD~HL~~~~~~~~----l~~~~--~~~~~~~~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (156)
T cd08165 1 MFLADTHLLGSILGHW----LDKLR--REWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHP 74 (156)
T ss_pred CccccchhcCCcccHH----HHHHh--hhHHHHHHHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccC
Confidence 4689999965432210 00000 12234456778888999999999999987543211 12222222333222
Q ss_pred cCCCEEEEcCCCCCC
Q 015367 141 LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~ 155 (408)
.++|+++|+||||..
T Consensus 75 ~~~~i~~v~GNHD~~ 89 (156)
T cd08165 75 PDLPLHVVVGNHDIG 89 (156)
T ss_pred CCCeEEEEcCCCCcC
Confidence 268999999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.8e-11 Score=119.00 Aligned_cols=89 Identities=26% Similarity=0.355 Sum_probs=62.6
Q ss_pred eEEEEEeccCcCC-CCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc-ccHHHHHHHHHhhhH
Q 015367 62 FKILQVADMHYGM-GKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST-TDVAESMIQAFGPAM 139 (408)
Q Consensus 62 ~ri~~iSDlH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~-~~~~~~~~~~l~~~~ 139 (408)
|||+|+||+|+|. ......|. ....+++..+.+.+.+.++|+||++||+++.... ......+.+.+..+.
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~--------~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~ 72 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRL--------EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLK 72 (390)
T ss_pred CeeEEecccccchhhccCccch--------HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhc
Confidence 6999999999994 32221110 0112345666677778899999999998877543 234556667777766
Q ss_pred hcCCCEEEEcCCCCCCCCC
Q 015367 140 ELGLPWAAVLGNHDQESTM 158 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~~ 158 (408)
..++|+|+++||||.....
T Consensus 73 ~~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 73 DAGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred cCCCcEEEecCCCCchhcc
Confidence 6789999999999986543
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.8e-10 Score=97.72 Aligned_cols=72 Identities=31% Similarity=0.411 Sum_probs=50.2
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcC--CCCCcccHHHHHHHHHhhh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNI--FGSSTTDVAESMIQAFGPA 138 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli--~~~~~~~~~~~~~~~l~~~ 138 (408)
.|||+++||+|-.... ++++..++...++|+++++||++ .-+. ......... +..+
T Consensus 3 ~mkil~vtDlHg~~~~--------------------~~k~~~~~~~~~~D~lviaGDlt~~~~~~-~~~~~~~~~-~e~l 60 (226)
T COG2129 3 KMKILAVTDLHGSEDS--------------------LKKLLNAAADIRADLLVIAGDLTYFHFGP-KEVAEELNK-LEAL 60 (226)
T ss_pred cceEEEEeccccchHH--------------------HHHHHHHHhhccCCEEEEecceehhhcCc-hHHHHhhhH-HHHH
Confidence 6999999999976542 35666776777999999999977 3332 222222111 4445
Q ss_pred HhcCCCEEEEcCCCCC
Q 015367 139 MELGLPWAAVLGNHDQ 154 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~ 154 (408)
....+|+++||||=|-
T Consensus 61 ~~~~~~v~avpGNcD~ 76 (226)
T COG2129 61 KELGIPVLAVPGNCDP 76 (226)
T ss_pred HhcCCeEEEEcCCCCh
Confidence 5679999999999775
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.7e-10 Score=99.61 Aligned_cols=55 Identities=22% Similarity=0.311 Sum_probs=36.6
Q ss_pred HHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEe
Q 015367 310 VLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAE 368 (408)
Q Consensus 310 ~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~ 368 (408)
.+..+.+..+++++++||+|. .+....+|+.+++.|+.+-...+ + .+++-+++++
T Consensus 97 ~l~~~~~~~~~d~vi~GHtH~-~~~~~~~~~~~iNpGs~~~~~~~--~-~~~~~il~~~ 151 (158)
T TIGR00040 97 VLEYLAKELGVDVLIFGHTHI-PVAEELRGILLINPGSLTGPRNG--N-TPSYAILDVD 151 (158)
T ss_pred HHHHHHhccCCCEEEECCCCC-CccEEECCEEEEECCccccccCC--C-CCeEEEEEec
Confidence 344454445689999999999 45566788888877665532211 1 4578888875
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.5e-10 Score=98.16 Aligned_cols=65 Identities=15% Similarity=0.221 Sum_probs=44.2
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcC
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELG 142 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 142 (408)
+|+++||+|++.... ...+.+.+.+++.++|.|+++||+++ ....+.+.. ..
T Consensus 1 ~i~viSDtHl~~~~~-----------------~~~~~~~~~~~~~~~d~iih~GDi~~--------~~~~~~l~~---~~ 52 (178)
T cd07394 1 LVLVIGDLHIPHRAS-----------------DLPAKFKKLLVPGKIQHVLCTGNLCS--------KETYDYLKT---IA 52 (178)
T ss_pred CEEEEEecCCCCCch-----------------hhHHHHHHHhccCCCCEEEECCCCCC--------HHHHHHHHh---hC
Confidence 489999999886431 12245667776678999999999763 122222222 13
Q ss_pred CCEEEEcCCCCCC
Q 015367 143 LPWAAVLGNHDQE 155 (408)
Q Consensus 143 ~p~~~v~GNHD~~ 155 (408)
.|+++|.||||..
T Consensus 53 ~~~~~V~GN~D~~ 65 (178)
T cd07394 53 PDVHIVRGDFDEN 65 (178)
T ss_pred CceEEEECCCCcc
Confidence 4799999999974
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.4e-11 Score=109.88 Aligned_cols=74 Identities=23% Similarity=0.319 Sum_probs=49.4
Q ss_pred EEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH--cCCCEEEEcCCcCCCC----CcccHHHHHHHHHhhh
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA--EKPDFIAFTGDNIFGS----STTDVAESMIQAFGPA 138 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~pD~vv~~GDli~~~----~~~~~~~~~~~~l~~~ 138 (408)
+++||+|++.... ...+.+.+.+++ .+||+|+++||+++.. ......+.+.+.++.+
T Consensus 2 ~~iSDlHl~~~~~-----------------~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L 64 (231)
T TIGR01854 2 LFISDLHLSPERP-----------------DITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQV 64 (231)
T ss_pred eEEEecCCCCCCh-----------------hHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHH
Confidence 7999999986531 112334444443 3799999999988732 1122234555666665
Q ss_pred HhcCCCEEEEcCCCCCC
Q 015367 139 MELGLPWAAVLGNHDQE 155 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~ 155 (408)
.+.++|+|+|+||||+.
T Consensus 65 ~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 65 SDQGVPCYFMHGNRDFL 81 (231)
T ss_pred HHCCCeEEEEcCCCchh
Confidence 55579999999999984
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.2e-11 Score=107.08 Aligned_cols=74 Identities=28% Similarity=0.387 Sum_probs=45.9
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHH------------
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAE------------ 129 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~------------ 129 (408)
=||+.+||+|-. .+.++++.+++.+.+||+|+++||++-.....+.|+
T Consensus 6 ~kilA~s~~~g~--------------------~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~ 65 (255)
T PF14582_consen 6 RKILAISNFRGD--------------------FELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKS 65 (255)
T ss_dssp -EEEEEE--TT---------------------HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----TH
T ss_pred hhheeecCcchH--------------------HHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchh
Confidence 479999999842 355788999999999999999999875443222222
Q ss_pred -----------HHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 130 -----------SMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 130 -----------~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
.+.+.+..+-..++|+++||||||-.
T Consensus 66 ~i~~e~~~~~e~~~~ff~~L~~~~~p~~~vPG~~Dap 102 (255)
T PF14582_consen 66 EINEEECYDSEALDKFFRILGELGVPVFVVPGNMDAP 102 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-SEEEEE--TTS-S
T ss_pred hhhhhhhhhHHHHHHHHHHHHhcCCcEEEecCCCCch
Confidence 23355555556799999999999975
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=98.29 Aligned_cols=86 Identities=20% Similarity=0.275 Sum_probs=52.3
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHH-HHHHc-CCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKR-IIEAE-KPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~-~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
|+|-.|||+|+..... +.++.+.+.|..+. ++|.+ ..... .-|.|++.||+......++..+.+. .+.
T Consensus 1 M~iyaiaDLHLa~~~p-KpM~vFGe~W~gh~-----ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea~~Dl~-~i~--- 70 (230)
T COG1768 1 MRIYAIADLHLALGVP-KPMEVFGEPWSGHH-----EKIKKHWRSKVSPEDIVLLPGDISWAMRLEEAEEDLR-FIG--- 70 (230)
T ss_pred CceeeeehhhHhhCCC-CceeecCCcccCch-----HHHHHHHHhcCChhhEEEecccchhheechhhhhhhh-hhh---
Confidence 5788999999987654 44555555563322 22322 22222 2389999999765554433333332 222
Q ss_pred hcCCCEEEEcCCCCCCCC
Q 015367 140 ELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~ 157 (408)
..+---|.+.|||||+..
T Consensus 71 ~LPG~K~m~rGNHDYWw~ 88 (230)
T COG1768 71 DLPGTKYMIRGNHDYWWS 88 (230)
T ss_pred cCCCcEEEEecCCccccc
Confidence 335557899999999876
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.2e-10 Score=94.41 Aligned_cols=61 Identities=20% Similarity=0.294 Sum_probs=39.9
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcC
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELG 142 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 142 (408)
||+++||+|.... .++..+||+|+++||+++... ...++.+.+.+. +.+
T Consensus 1 ~i~~isD~H~~~~---------------------------~~~~~~~D~vi~~GD~~~~~~-~~~~~~~~~~l~---~~~ 49 (135)
T cd07379 1 RFVCISDTHSRHR---------------------------TISIPDGDVLIHAGDLTERGT-LEELQKFLDWLK---SLP 49 (135)
T ss_pred CEEEEeCCCCCCC---------------------------cCcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHH---hCC
Confidence 5899999995422 123468999999999875543 223334444433 334
Q ss_pred CC-EEEEcCCCCC
Q 015367 143 LP-WAAVLGNHDQ 154 (408)
Q Consensus 143 ~p-~~~v~GNHD~ 154 (408)
.| +++|+||||.
T Consensus 50 ~~~~~~v~GNHD~ 62 (135)
T cd07379 50 HPHKIVIAGNHDL 62 (135)
T ss_pred CCeEEEEECCCCC
Confidence 44 5789999995
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.8e-11 Score=109.93 Aligned_cols=88 Identities=22% Similarity=0.244 Sum_probs=60.3
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccH-HHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDV-AESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~-~~~~~~~l~~~~~ 140 (408)
|||+|+||+|++.......+. . .....++++.+.+.+++||+|+++||+++....... ...+.+.+..+.+
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~---~-----~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~ 72 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRL---A-----EQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSD 72 (253)
T ss_pred CEEEEEhhhcCCCccCCCChH---H-----HHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 689999999999754321110 0 011345677777788899999999998876643222 2345566666555
Q ss_pred cC-CCEEEEcCCCCCCCC
Q 015367 141 LG-LPWAAVLGNHDQEST 157 (408)
Q Consensus 141 ~~-~p~~~v~GNHD~~~~ 157 (408)
.. +|+++|+||||....
T Consensus 73 ~~~i~v~~i~GNHD~~~~ 90 (253)
T TIGR00619 73 ANPIPIVVISGNHDSAQR 90 (253)
T ss_pred cCCceEEEEccCCCChhh
Confidence 55 999999999998543
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.8e-10 Score=94.69 Aligned_cols=48 Identities=21% Similarity=0.367 Sum_probs=34.4
Q ss_pred CCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEec
Q 015367 318 GDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEA 369 (408)
Q Consensus 318 ~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~~ 369 (408)
.+++++++||+|.. .....+|+.+++.|+.+.... ...+++.+++++.
T Consensus 101 ~~~d~vi~GHtH~~-~~~~~~~~~~inpGs~~~~~~---~~~~~~~i~~~~~ 148 (155)
T cd00841 101 GGADVVLYGHTHIP-VIEKIGGVLLLNPGSLSLPRG---GGPPTYAILEIDD 148 (155)
T ss_pred cCCCEEEECcccCC-ccEEECCEEEEeCCCccCcCC---CCCCeEEEEEecC
Confidence 35899999999994 555678888888777664321 2246888888863
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.3e-09 Score=96.68 Aligned_cols=215 Identities=17% Similarity=0.238 Sum_probs=106.3
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccH--HHHHHHHHhhh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDV--AESMIQAFGPA 138 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~--~~~~~~~l~~~ 138 (408)
++|+|++|+| ..... .... ..+...+..+.+.+++++|| +++.+||++........ -+...+.++
T Consensus 1 ~~il~~nd~~-~~~~~-~~~~--------~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~-- 68 (257)
T cd07406 1 FTILHFNDVY-EIAPL-DGGP--------VGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLN-- 68 (257)
T ss_pred CeEEEEccce-eeccc-CCCC--------cCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHH--
Confidence 5899999999 22211 0000 12344556666666677888 99999998865432111 122333333
Q ss_pred HhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCcc--ccCCCCCCCcccccCCccccccCccce-EEEeeCCCCCCCC
Q 015367 139 MELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVA--QVNPPAEDPSNLAKGGVMEKIDGFGNY-DLRVYGPPGSHLA 215 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~g~~~y-~~~v~~~~~~~~~ 215 (408)
..+.. ++++||||+..+ .+.+.++++....... .+.... .+. .......| .+.+.+
T Consensus 69 -~l~~d-~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~-------~~~---~~~~~~~~~i~~~~g------- 127 (257)
T cd07406 69 -ALGVD-LACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDAT-------GGG---PLPNGKESAIIERAG------- 127 (257)
T ss_pred -hcCCc-EEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECC-------CCc---ccCCCCCeEEEEECC-------
Confidence 22443 668999998544 3344444443322110 000000 000 11111223 333332
Q ss_pred CcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccc
Q 015367 216 NSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVG 295 (408)
Q Consensus 216 ~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g 295 (408)
..+.++.+-+............+..-.+-.+.+++.++++++ ....-+|++.|-+....
T Consensus 128 --~kIgviG~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~---------~~~D~iVvl~H~g~~~d---------- 186 (257)
T cd07406 128 --VKIGLLGLVEEEWLETLTIDPEYVRYRDYVETARELVDELRE---------QGADLIIALTHMRLPND---------- 186 (257)
T ss_pred --eEEEEEEEecccccccccCCCCcceEcCHHHHHHHHHHHHHh---------CCCCEEEEEeccCchhh----------
Confidence 235677776643210000001121122344555565545542 24566788888765310
Q ss_pred ccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeC
Q 015367 296 QFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGG 346 (408)
Q Consensus 296 ~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~ 346 (408)
..+ +.+.+.|++|+.||.|.. .....+|..++.++
T Consensus 187 ------------~~l---a~~~~~iD~IlgGH~H~~-~~~~~~~t~vv~~g 221 (257)
T cd07406 187 ------------KRL---AREVPEIDLILGGHDHEY-ILVQVGGTPIVKSG 221 (257)
T ss_pred ------------HHH---HHhCCCCceEEeccccee-EeeeECCEEEEeCC
Confidence 112 233467999999999984 45556676666554
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-08 Score=96.51 Aligned_cols=97 Identities=28% Similarity=0.355 Sum_probs=51.8
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEE-cCCcCCCCCcccHH--------HHHH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAF-TGDNIFGSSTTDVA--------ESMI 132 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~-~GDli~~~~~~~~~--------~~~~ 132 (408)
++|++++|+|-..... .|..... ....+...+..+.+.+++.+||.+++ +||++++....... ....
T Consensus 1 l~il~t~D~Hg~~~~~-~~~~~~~---~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~ 76 (277)
T cd07410 1 LRILATSDLHGNLLPY-DYYTDKP---DASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMI 76 (277)
T ss_pred CeEEEEeccccceeCc-cccCCCc---CCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHH
Confidence 5899999999432211 1100000 00123444566666667778998887 99987654311111 1223
Q ss_pred HHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 133 QAFGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 133 ~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
+.++ ..++. ++++||||+..+ .+.+.+..+
T Consensus 77 ~~ln---~~g~d-~~~lGNHe~d~g--~~~l~~~~~ 106 (277)
T cd07410 77 AAMN---ALGYD-AGTLGNHEFNYG--LDYLDKVIK 106 (277)
T ss_pred HHHH---hcCCC-EEeecccCcccC--HHHHHHHHH
Confidence 3332 33554 667899998643 334444443
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-09 Score=90.12 Aligned_cols=69 Identities=26% Similarity=0.402 Sum_probs=46.2
Q ss_pred EEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCC
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLP 144 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p 144 (408)
+++||+|.+...... ........+.+||+||++||+++...... ...+.. +........|
T Consensus 1 ~~~gD~h~~~~~~~~------------------~~~~~~~~~~~~~~vi~~GD~~~~~~~~~-~~~~~~-~~~~~~~~~~ 60 (131)
T cd00838 1 AVISDIHGNLEALEA------------------VLEAALAAAEKPDFVLVLGDLVGDGPDPE-EVLAAA-LALLLLLGIP 60 (131)
T ss_pred CeeecccCCccchHH------------------HHHHHHhcccCCCEEEECCcccCCCCCch-HHHHHH-HHHhhcCCCC
Confidence 478999998664210 01134455689999999999987665432 222221 2334567899
Q ss_pred EEEEcCCCC
Q 015367 145 WAAVLGNHD 153 (408)
Q Consensus 145 ~~~v~GNHD 153 (408)
+++++||||
T Consensus 61 ~~~~~GNHD 69 (131)
T cd00838 61 VYVVPGNHD 69 (131)
T ss_pred EEEeCCCce
Confidence 999999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.2e-08 Score=94.85 Aligned_cols=91 Identities=24% Similarity=0.293 Sum_probs=52.7
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCccc--HHHHHHHHHhhh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTD--VAESMIQAFGPA 138 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~--~~~~~~~~l~~~ 138 (408)
++|+++||+| +.... |. ...+...++.+.+.+++.+|| +++.+||+++.....+ ....+.+.+.
T Consensus 1 l~i~~~sD~h-g~~~~--~~--------~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~-- 67 (252)
T cd00845 1 LTILHTNDLH-GHFEP--AG--------GVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMN-- 67 (252)
T ss_pred CEEEEecccc-cCccc--cC--------CcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHH--
Confidence 5899999999 43211 00 001334556677777777888 8899999987654321 1122333332
Q ss_pred HhcCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 139 MELGLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
..+ ..++++||||+.... +.+.+....
T Consensus 68 -~~g-~d~~~~GNHe~d~g~--~~l~~~~~~ 94 (252)
T cd00845 68 -ALG-YDAVTIGNHEFDYGL--DALAELYKD 94 (252)
T ss_pred -hcC-CCEEeeccccccccH--HHHHHHHHh
Confidence 223 456788999986443 334444443
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.1e-10 Score=100.50 Aligned_cols=74 Identities=23% Similarity=0.267 Sum_probs=52.4
Q ss_pred EEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCC--CEEEEcCCcCCCCCc----ccHHHHHHHHHhhh
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKP--DFIAFTGDNIFGSST----TDVAESMIQAFGPA 138 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p--D~vv~~GDli~~~~~----~~~~~~~~~~l~~~ 138 (408)
++|||+|++.... ...+.+.+.++...+ |.+.+.||+++.-.. ++...++.+.+..+
T Consensus 1 lFISDlHL~~~~p-----------------~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~ 63 (237)
T COG2908 1 LFISDLHLGPKRP-----------------ALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL 63 (237)
T ss_pred CeeeccccCCCCc-----------------HHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH
Confidence 4799999996643 123567777776655 999999998865432 22334455555555
Q ss_pred HhcCCCEEEEcCCCCCC
Q 015367 139 MELGLPWAAVLGNHDQE 155 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~ 155 (408)
.+.+.|+|+++||||+-
T Consensus 64 a~~G~~v~~i~GN~Dfl 80 (237)
T COG2908 64 ARKGTRVYYIHGNHDFL 80 (237)
T ss_pred HhcCCeEEEecCchHHH
Confidence 67789999999999963
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.8e-10 Score=101.34 Aligned_cols=74 Identities=23% Similarity=0.203 Sum_probs=45.1
Q ss_pred EEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH---HcCCCEEEEcCCcCCCCCc-----ccHHHHHHHHHh
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE---AEKPDFIAFTGDNIFGSST-----TDVAESMIQAFG 136 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pD~vv~~GDli~~~~~-----~~~~~~~~~~l~ 136 (408)
++|||+|++...... ...+...+. ..+||.||++||+++.... ..........+.
T Consensus 1 ~~iSDlHlg~~~~~~-----------------~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAA-----------------DFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCH-----------------HHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHH
Confidence 479999999765321 112222222 2599999999998864211 111222212222
Q ss_pred hhHhcCCCEEEEcCCCCCC
Q 015367 137 PAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 137 ~~~~~~~p~~~v~GNHD~~ 155 (408)
.....+.++++|+||||..
T Consensus 64 ~~~~~~~~v~~v~GNHD~~ 82 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFL 82 (217)
T ss_pred HHHHCCCeEEEECCCchHH
Confidence 3356789999999999984
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-09 Score=101.24 Aligned_cols=77 Identities=21% Similarity=0.265 Sum_probs=52.7
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH--HcCCCEEEEcCCcCCCCC----cccHHHHHHHHH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE--AEKPDFIAFTGDNIFGSS----TTDVAESMIQAF 135 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~pD~vv~~GDli~~~~----~~~~~~~~~~~l 135 (408)
||+++|||+|++.... ...+.+.+.++ +.+||+|+++||+++... .......+.+.+
T Consensus 1 M~i~~iSDlHl~~~~~-----------------~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l 63 (241)
T PRK05340 1 MPTLFISDLHLSPERP-----------------AITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAAL 63 (241)
T ss_pred CcEEEEeecCCCCCCh-----------------hHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHH
Confidence 6899999999986532 11233444443 368999999999886421 112334556666
Q ss_pred hhhHhcCCCEEEEcCCCCCC
Q 015367 136 GPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 136 ~~~~~~~~p~~~v~GNHD~~ 155 (408)
+.+.+.++|+++|+||||+.
T Consensus 64 ~~l~~~g~~v~~v~GNHD~~ 83 (241)
T PRK05340 64 KALSDSGVPCYFMHGNRDFL 83 (241)
T ss_pred HHHHHcCCeEEEEeCCCchh
Confidence 66556679999999999974
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.1e-09 Score=85.87 Aligned_cols=37 Identities=35% Similarity=0.368 Sum_probs=25.0
Q ss_pred HcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCC
Q 015367 106 AEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHD 153 (408)
Q Consensus 106 ~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD 153 (408)
..++|+|+++||+. . +... .+..+ .+.|+++|.||||
T Consensus 20 ~~~~d~ii~~GD~~-~----~~~~----~~~~~--~~~~~~~V~GN~D 56 (129)
T cd07403 20 LEGVDLILSAGDLP-K----EYLE----YLVTM--LNVPVYYVHGNHD 56 (129)
T ss_pred CCCCCEEEECCCCC-h----HHHH----HHHHH--cCCCEEEEeCCCc
Confidence 57899999999953 1 1111 12221 3678999999998
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=3e-09 Score=93.65 Aligned_cols=100 Identities=16% Similarity=0.123 Sum_probs=59.5
Q ss_pred EEEeccCcCCCCccccC-ccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhh-----
Q 015367 65 LQVADMHYGMGKVTRCR-DVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPA----- 138 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~----- 138 (408)
+++||.|+-........ .|. .+|. .+....+....+++..+||+|+++||+++.+.... .+.+.+.++.+
T Consensus 1 llvADPqllg~~~~~~~~~~~-~~~~--~D~yl~r~~~~a~~~l~PD~Vi~lGDL~D~G~~~~-~~e~~e~l~Rf~~If~ 76 (195)
T cd08166 1 LLVADPQILGYQNENFGLGWI-ARWD--SDRYLKKTYHLALNFVQPDIVIFLGDLMDEGSIAN-DDEYYSYVQRFINIFE 76 (195)
T ss_pred CcccCccccCCCCCCccccHH-HHHH--HHHHHHHHHHHHHhccCCCEEEEeccccCCCCCCC-HHHHHHHHHHHHHHhc
Confidence 46889998765432110 011 1221 33344566677788889999999999998876422 22222222222
Q ss_pred HhcCCCEEEEcCCCCCCCC---CCHHHHHHHHH
Q 015367 139 MELGLPWAAVLGNHDQEST---MDREELMYFIS 168 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~~~---~~~~~~~~~~~ 168 (408)
....+|+++|+||||.+.. ...+.+.+|.+
T Consensus 77 ~~~~~~~~~VpGNHDIG~~~~~~~~~~v~RF~~ 109 (195)
T cd08166 77 VPNGTKIIYLPGDNDIGGEEEDPIESKIRRFEK 109 (195)
T ss_pred CCCCCcEEEECCCCCcCCCCCCcCHHHHHHHHH
Confidence 1347899999999999864 33444455533
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.3e-09 Score=92.90 Aligned_cols=86 Identities=24% Similarity=0.292 Sum_probs=54.4
Q ss_pred EEEeccCcCCCCccccCc-cccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHH-HhhhHhcC
Q 015367 65 LQVADMHYGMGKVTRCRD-VTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQA-FGPAMELG 142 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~-l~~~~~~~ 142 (408)
+++||+|+|......... ..|. ....++++++.+.+++.+||.||++||+++...... ....... +..+...+
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~----~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~-~~~~~~~~~~~~~~~~ 75 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPR----GQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLS-RQEFEEVAFLRLLAKD 75 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCc----ccHHHHHHHHHHHHHhcCCCEEEEeCcccccccccC-HHHHHHHHHHHhccCC
Confidence 579999999754321111 1111 122356778888888999999999999986544222 1111111 22234568
Q ss_pred CCEEEEcCCCCCC
Q 015367 143 LPWAAVLGNHDQE 155 (408)
Q Consensus 143 ~p~~~v~GNHD~~ 155 (408)
+|+++|+||||..
T Consensus 76 ~~v~~i~GNHD~~ 88 (172)
T cd07391 76 VDVILIRGNHDGG 88 (172)
T ss_pred CeEEEEcccCccc
Confidence 8999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.4e-07 Score=82.84 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=52.4
Q ss_pred eEEEEEeccCcCCCCccccC-cc-ccccccccCChHHHHHHHHHHHHc-CCCEE-EEcCCcCCCCCcccHHHHHHHHHhh
Q 015367 62 FKILQVADMHYGMGKVTRCR-DV-TATEFKYCSDLNTTRFLKRIIEAE-KPDFI-AFTGDNIFGSSTTDVAESMIQAFGP 137 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~i~~~-~pD~v-v~~GDli~~~~~~~~~~~~~~~l~~ 137 (408)
++|++++|+|-......... .. .+......-+...++.+.+.+++. +||.+ +.+||+++.... .....-...+..
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ 79 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVDA 79 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHHH
Confidence 47999999998644321000 00 000001112444556666666667 89977 569998865432 111111122222
Q ss_pred hHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 138 AMELGLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
+ . .+++.++.||||+..+. +.+.++.+.
T Consensus 80 l-~-~~g~da~~GNHefd~g~--~~l~~~~~~ 107 (264)
T cd07411 80 L-N-ALGVDAMVGHWEFTYGP--ERVRELFGR 107 (264)
T ss_pred H-H-hhCCeEEecccccccCH--HHHHHHHhh
Confidence 2 2 25555555999986542 334444443
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.3e-09 Score=90.84 Aligned_cols=91 Identities=27% Similarity=0.305 Sum_probs=56.0
Q ss_pred EEEeccCcCCCCccccCccccccc-cccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc--HHHHHHHHHhhhHh-
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEF-KYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD--VAESMIQAFGPAME- 140 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~~l~~~~~- 140 (408)
+.+||+|++.......+.+..... ....+....+.+..++++.+||+||++||+++...... .+....+.+..+..
T Consensus 1 llvaDpql~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~ 80 (171)
T cd07384 1 LLVADPQILDETSYPPRPKIALRLTRFYTDAYMRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFL 80 (171)
T ss_pred CcccCccccCCCCCCCCchhhhHHHHHhHHHHHHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcc
Confidence 468999999765433222100000 01133345577778888899999999999987654321 23333333333221
Q ss_pred -----cCCCEEEEcCCCCCC
Q 015367 141 -----LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 -----~~~p~~~v~GNHD~~ 155 (408)
..+|+++|+||||..
T Consensus 81 ~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 81 PSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred cccccCCceEEEECCccccC
Confidence 268999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-07 Score=91.52 Aligned_cols=109 Identities=20% Similarity=0.128 Sum_probs=61.8
Q ss_pred eccccccccCCCCCCccccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCc
Q 015367 39 ISHDKIHLKKYPDLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDN 118 (408)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDl 118 (408)
+.+.+...+.. .+++..+||+.+||.|+-.......-.-.-.+|. .|....+.......-.+||.+++.|||
T Consensus 32 ~~c~Wp~~~~~------~~~~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~--~D~~lrr~f~~~~~~lkPdvvffLGDL 103 (410)
T KOG3662|consen 32 FQCQWPGKKQW------ASNENSTKILLVADPQILGNWPKKFLVSWLDKYG--NDWYLRRSFDMSQWRLKPDVVFFLGDL 103 (410)
T ss_pred ccccCCccccc------cCCCCceEEEEecCchhcCCCCCccccchHHhhh--hHHHHHHHHHHHHhccCCCEEEEeccc
Confidence 56777754321 1224689999999999976332110000000111 122222222233334799999999999
Q ss_pred CCCCCc--ccH----HHHHHHHHhhhHhcCCCEEEEcCCCCCCCC
Q 015367 119 IFGSST--TDV----AESMIQAFGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 119 i~~~~~--~~~----~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
+|++.. .++ ++++.+++. .+..+|+..++||||.+..
T Consensus 104 fDeG~~~~~eEf~~~~~RfkkIf~--~k~~~~~~~i~GNhDIGf~ 146 (410)
T KOG3662|consen 104 FDEGQWAGDEEFKKRYERFKKIFG--RKGNIKVIYIAGNHDIGFG 146 (410)
T ss_pred cccCccCChHHHHHHHHHHHHhhC--CCCCCeeEEeCCccccccc
Confidence 986643 122 233333333 2358999999999999755
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=98.78 E-value=2e-07 Score=94.34 Aligned_cols=204 Identities=17% Similarity=0.260 Sum_probs=89.0
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc----------------
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST---------------- 124 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~---------------- 124 (408)
.+||++.|+-+...... ..+..+++..+|||+|++||.|+.+..
T Consensus 105 ~~r~a~~SC~~~~~~~~--------------------~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~ 164 (453)
T PF09423_consen 105 PFRFAFGSCQNYEDGYF--------------------PAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPE 164 (453)
T ss_dssp -EEEEEE----CCC-----------------------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S-----
T ss_pred ceEEEEECCCCcccChH--------------------HHHHhhhccCCCcEEEEeCCeeeccCCcccccccccccccccc
Confidence 59999999998753321 223333333689999999999998742
Q ss_pred ----ccHHHHHH---------HHHhhhHhcCCCEEEEcCCCCCCCCCC--H--------HHHH--------HHHHHccCC
Q 015367 125 ----TDVAESMI---------QAFGPAMELGLPWAAVLGNHDQESTMD--R--------EELM--------YFISLMDYS 173 (408)
Q Consensus 125 ----~~~~~~~~---------~~l~~~~~~~~p~~~v~GNHD~~~~~~--~--------~~~~--------~~~~~~~~~ 173 (408)
....+.+. ..++. +.+.+|+++++-.||+.++.. . .... .|+...|..
T Consensus 165 p~~~~~~l~~yR~~y~~~~~~p~l~~-~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r 243 (453)
T PF09423_consen 165 PAHEAETLDDYRRRYRQYRSDPDLRR-LHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVR 243 (453)
T ss_dssp SSSS--SHHHHHHHHHHHHT-HHHHH-HHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---
T ss_pred cccccccHHHHHHHHHHHcCCHHHHH-HhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcCcc
Confidence 01111111 12222 235789999999999976543 0 0010 111111110
Q ss_pred ccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeEEEEEeCCCCCCcCC------------cCcCCC
Q 015367 174 VAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRG------------VRTYGY 241 (408)
Q Consensus 174 ~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~~i~LDS~~~~~~~~------------~~~~g~ 241 (408)
... +. .....-++.+.++. .+.+++||+..+..... ......
T Consensus 244 ~~~--~~--------------~~~~~~y~~~~~G~----------~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~m 297 (453)
T PF09423_consen 244 NPD--PP--------------GDQGRIYRSFRYGD----------LVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTM 297 (453)
T ss_dssp GGG---B--------------TTB----EEEEETT----------TEEEEE--SSSS----CCCSSEE--HHHH-TT--S
T ss_pred CCC--cc--------------CCCCceEEEEecCC----------ceeEEEEechhccccccccccccccccccCCccCc
Confidence 000 00 00111245566553 36799999987643211 123456
Q ss_pred CcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccc--------cCCcccccccccccCCCChHHHHH
Q 015367 242 IKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLY--------YQNIVGQFQEAVACSRVNSGVLQT 313 (408)
Q Consensus 242 i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~--------~~~~~g~~~e~~~~~~~~~~~l~~ 313 (408)
++++|++||++.|++. ...+.||..-.|+....... .+...|. +....++++.
T Consensus 298 LG~~Q~~wL~~~L~~s------------~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~-------~~er~~Ll~~ 358 (453)
T PF09423_consen 298 LGEEQWDWLEDWLASS------------QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGY-------PAERQRLLDF 358 (453)
T ss_dssp S-HHHHHHHHHHHHH--------------SSEEEEE-SS--S---SS-SS-S--EETTSGGGS-------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcC------------CCcEEEEEeCCceecccccccccccccCCCchhhC-------HHHHHHHHHH
Confidence 9999999999998775 36788888877765432211 1111111 1233478888
Q ss_pred HHhcCCe--EEEEeccCCCC
Q 015367 314 LVSLGDI--KAVFVGHDHTN 331 (408)
Q Consensus 314 l~~~~~V--~~v~~GH~H~n 331 (408)
|.+.+ + .++|+|-.|..
T Consensus 359 l~~~~-~~~vV~LSGDvH~~ 377 (453)
T PF09423_consen 359 LRESG-IRNVVFLSGDVHAS 377 (453)
T ss_dssp HHHTT----EEEEE-SSSSE
T ss_pred HHhhC-CCCEEEEecCcchh
Confidence 87764 5 48999999984
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.4e-07 Score=84.11 Aligned_cols=92 Identities=20% Similarity=0.263 Sum_probs=50.9
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccH--HHHHHHHHhhhH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDV--AESMIQAFGPAM 139 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~--~~~~~~~l~~~~ 139 (408)
++|+++||+|........ ...+...+..+.+.+++.++++++.+||++.+...... .+...+.+ .
T Consensus 1 i~il~~~D~H~~~~~~~~----------~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l---n 67 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN----------NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIM---N 67 (257)
T ss_pred CEEEEeccCcccccCCCC----------ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHH---H
Confidence 589999999965432100 01233344455555554467899999998865431110 11222332 2
Q ss_pred hcCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 140 ELGLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
..++.+ +++||||+..+ .+.+.++.+.
T Consensus 68 ~~g~d~-~~~GNHefd~G--~~~l~~~~~~ 94 (257)
T cd07408 68 AVGYDA-VTPGNHEFDYG--LDRLKELSKE 94 (257)
T ss_pred hcCCcE-EccccccccCC--HHHHHHHHhh
Confidence 346665 56899998643 3444444443
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.8e-07 Score=77.99 Aligned_cols=65 Identities=28% Similarity=0.314 Sum_probs=45.4
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
.+||+++||+|..... .....+.....++|+||++||.+.... ...+...
T Consensus 1 ~m~ilviSDtH~~~~~--------------------~~~~~~~~~~~~~d~vih~GD~~~~~~----~~~l~~~------ 50 (172)
T COG0622 1 MMKILVISDTHGPLRA--------------------IEKALKIFNLEKVDAVIHAGDSTSPFT----LDALEGG------ 50 (172)
T ss_pred CcEEEEEeccCCChhh--------------------hhHHHHHhhhcCCCEEEECCCcCCccc----hHHhhcc------
Confidence 3799999999976531 134555556789999999999775432 1222211
Q ss_pred cCCCEEEEcCCCCCC
Q 015367 141 LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~ 155 (408)
...++++|.||.|..
T Consensus 51 ~~~~i~~V~GN~D~~ 65 (172)
T COG0622 51 LAAKLIAVRGNCDGE 65 (172)
T ss_pred cccceEEEEccCCCc
Confidence 257899999999985
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.4e-06 Score=81.08 Aligned_cols=86 Identities=21% Similarity=0.244 Sum_probs=45.7
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccHH---HHHHHHHhh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDVA---ESMIQAFGP 137 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~~---~~~~~~l~~ 137 (408)
++|++++|+|-.-... .+.. . ....+...+..+.+.+++..|+ +++.+||++......... +...+.+
T Consensus 1 i~il~tnD~Hg~~~~~-~~~~--~---~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~-- 72 (288)
T cd07412 1 VQILAINDFHGRLEPP-GKVV--T---VPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEAL-- 72 (288)
T ss_pred CeEEEEeccccCccCC-CCcc--c---cccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHH--
Confidence 4799999999432211 1000 0 0012334445555555656665 899999987543311111 1222222
Q ss_pred hHhcCCCEEEEcCCCCCCCC
Q 015367 138 AMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~~ 157 (408)
...++. ++++||||+..+
T Consensus 73 -n~~g~D-a~t~GNHefd~G 90 (288)
T cd07412 73 -NAMGVD-ASAVGNHEFDEG 90 (288)
T ss_pred -HhhCCe-eeeecccccccC
Confidence 233555 467799998654
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.1e-08 Score=87.57 Aligned_cols=71 Identities=18% Similarity=0.301 Sum_probs=48.0
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc---cc--HHHHHHHHHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST---TD--VAESMIQAFG 136 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~---~~--~~~~~~~~l~ 136 (408)
|||++|||+|... ..++.+.+.+++.+||.|+++||+++.... +. ....+.+.+
T Consensus 1 mri~viSD~Hg~~--------------------~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l- 59 (182)
T PRK09453 1 MKLMFASDTHGSL--------------------PATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELL- 59 (182)
T ss_pred CeEEEEEeccCCH--------------------HHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHH-
Confidence 6899999999431 124567777777899999999998864321 00 112233333
Q ss_pred hhHhcCCCEEEEcCCCCCC
Q 015367 137 PAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 137 ~~~~~~~p~~~v~GNHD~~ 155 (408)
.+.+.++++|.||||..
T Consensus 60 --~~~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 60 --NAYADKIIAVRGNCDSE 76 (182)
T ss_pred --HhcCCceEEEccCCcch
Confidence 33457899999999963
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-05 Score=75.73 Aligned_cols=93 Identities=20% Similarity=0.278 Sum_probs=46.7
Q ss_pred eEEEEEeccCcCCCCccccCcccc-ccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccH--HHHHHHHHhh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTA-TEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDV--AESMIQAFGP 137 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~--~~~~~~~l~~ 137 (408)
++|++.+|+|-............. .......+...+..+.+.+++..|+ +++.+||++.+...... -+...+.+
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~l-- 78 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFM-- 78 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHH--
Confidence 579999999965432110000000 0000012334445555555566787 45559998765432110 12222332
Q ss_pred hHhcCCCEEEEcCCCCCCCCC
Q 015367 138 AMELGLPWAAVLGNHDQESTM 158 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~~~ 158 (408)
...++.+. ++||||+..+.
T Consensus 79 -n~~g~D~~-~lGNHefd~G~ 97 (281)
T cd07409 79 -NLLGYDAM-TLGNHEFDDGV 97 (281)
T ss_pred -HhcCCCEE-EeccccccCCH
Confidence 23466654 67999997553
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.3e-08 Score=88.12 Aligned_cols=87 Identities=14% Similarity=0.006 Sum_probs=55.9
Q ss_pred eEEEEEeccCcCCCCccccCcc-ccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDV-TATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
-+.+++||+|+|.......+.. .|. .+..++++++.+.+++.+||.|+++||+.........+..+.+.++.
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~----~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~--- 87 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPG----FQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEV--- 87 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCCh----hHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHh---
Confidence 4689999999997543211111 111 11224567777788888999999999987544321334444444432
Q ss_pred cCCCEEEEcCCCCCC
Q 015367 141 LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~ 155 (408)
...++++|+||||..
T Consensus 88 ~~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 88 TFRDLILIRGNHDAL 102 (225)
T ss_pred cCCcEEEECCCCCCc
Confidence 346999999999964
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.2e-06 Score=94.78 Aligned_cols=218 Identities=17% Similarity=0.172 Sum_probs=109.3
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEE-cCCcCCCCCcccH--HHHHHHHHh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAF-TGDNIFGSSTTDV--AESMIQAFG 136 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~-~GDli~~~~~~~~--~~~~~~~l~ 136 (408)
..++|++++|+|-.... ...+..+.+.+++.+||.+++ +||++.+...... .....+.+.
T Consensus 659 ~~l~Il~~nD~Hg~l~g-----------------~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln 721 (1163)
T PRK09419 659 WELTILHTNDFHGHLDG-----------------AAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMK 721 (1163)
T ss_pred eEEEEEEEeecccCCCC-----------------HHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHh
Confidence 35999999999933211 123455566666778998877 9998865421110 012222222
Q ss_pred hhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHc--------------cCCccccCCCCCCCcccccCCccccccCccce
Q 015367 137 PAMELGLPWAAVLGNHDQESTMDREELMYFISLM--------------DYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNY 202 (408)
Q Consensus 137 ~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~--------------~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y 202 (408)
..++ -++++||||+..+. +.+.++.... |.-...+.... -+. .......|
T Consensus 722 ---~lg~-d~~~~GNHEfd~g~--~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~-------~~~---~~~~~~py 785 (1163)
T PRK09419 722 ---EMGY-DASTFGNHEFDWGP--DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKK-------TGK---LVSWAKPY 785 (1163)
T ss_pred ---CcCC-CEEEecccccccCh--HHHHHHHHhcccccccccccCCCCCEEEEEEEeCC-------CCc---cccccCCE
Confidence 2233 35699999996553 3344444321 11000000000 000 00011123
Q ss_pred E-EEeeCCCCCCCCCcceeEEEEEeCCCCC--CcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEec
Q 015367 203 D-LRVYGPPGSHLANSSILNLFFLDSGDRE--TVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFH 279 (408)
Q Consensus 203 ~-~~v~~~~~~~~~~~~~~~~i~LDS~~~~--~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~H 279 (408)
. +.+.+ ..+.++.+-+.... ..+.. ..|.-=.+..+.+++..++++++ ....-+|++.|
T Consensus 786 ~I~e~~G---------~kIgiiGltt~~~~~~~~p~~-~~~l~f~d~~e~~~~~v~~Lr~~--------~~~D~VV~LsH 847 (1163)
T PRK09419 786 ILVEVNG---------KKVGFIGLTTPETAYKTSPGN-VKNLEFKDPAEAAKKWVKELKEK--------EKVDAIIALTH 847 (1163)
T ss_pred EEEEECC---------EEEEEEEecccccccccCCCC-cCCcEEcCHHHHHHHHHHHHHhh--------cCCCEEEEEec
Confidence 3 23322 23556666543211 11110 01221223455666766667521 24677889999
Q ss_pred CCCCCccccccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeC
Q 015367 280 IPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGG 346 (408)
Q Consensus 280 hPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~ 346 (408)
........ .+ ..+..+...+.++|++++.||.|.. .....+|+.++.++
T Consensus 848 ~G~~~d~~------~~-----------~~~~~~lA~~v~gIDvIigGHsH~~-~~~~v~~~~ivqag 896 (1163)
T PRK09419 848 LGSNQDRT------TG-----------EITGLELAKKVKGVDAIISAHTHTL-VDKVVNGTPVVQAY 896 (1163)
T ss_pred CCcccccc------cc-----------ccHHHHHHHhCCCCCEEEeCCCCcc-ccccCCCEEEEeCC
Confidence 87643110 00 0123444555678999999999984 44455777666553
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.60 E-value=4e-06 Score=93.96 Aligned_cols=98 Identities=27% Similarity=0.323 Sum_probs=51.8
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEE-cCCcCCCCCcccH-----------H
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAF-TGDNIFGSSTTDV-----------A 128 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~-~GDli~~~~~~~~-----------~ 128 (408)
.++|++.+|+|-.-.......+. + ....+...+..+.+.++++.|+.+++ +||++.+....+. .
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~-~---~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~ 116 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDK-E---TTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKT 116 (1163)
T ss_pred EEEEEEEecccccccccccccCC-C---CCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCc
Confidence 59999999999764321100000 0 00123444555666666677876665 9998865431110 0
Q ss_pred HHHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 129 ESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 129 ~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
....+++ ...++- ++++||||+..+. +.+.+..+
T Consensus 117 ~~~i~~m---N~lgyD-a~~lGNHEFd~G~--~~L~~~~~ 150 (1163)
T PRK09419 117 HPMIKAM---NALGYD-AGTLGNHEFNYGL--DFLDGTIK 150 (1163)
T ss_pred CHHHHHH---hhcCcc-EEeecccccccCH--HHHHHHHh
Confidence 1122222 233554 4579999996543 33444443
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.1e-07 Score=88.10 Aligned_cols=76 Identities=17% Similarity=0.283 Sum_probs=49.9
Q ss_pred EEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc-----CCCEEEEcCCcCCCCCc----c---------c
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE-----KPDFIAFTGDNIFGSST----T---------D 126 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~pD~vv~~GDli~~~~~----~---------~ 126 (408)
++|||+|++..... ...++.+.+.++.. +||.||++||+++.... . +
T Consensus 2 ~~iSDlHl~~~~~~---------------~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~ 66 (243)
T cd07386 2 VFISDVHVGSKTFL---------------EDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYE 66 (243)
T ss_pred EEecccCCCchhhh---------------HHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHH
Confidence 78999999865321 12345677777654 56999999999875311 0 1
Q ss_pred HHHHHHHHHhhhHhcCCCEEEEcCCCCCCC
Q 015367 127 VAESMIQAFGPAMELGLPWAAVLGNHDQES 156 (408)
Q Consensus 127 ~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~ 156 (408)
....+.+.++. +..++|+++++||||...
T Consensus 67 ~~~~~~~~l~~-L~~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 67 QYEEAAEYLSD-VPSHIKIIIIPGNHDAVR 95 (243)
T ss_pred HHHHHHHHHHh-cccCCeEEEeCCCCCccc
Confidence 12334444444 244799999999999864
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.5e-07 Score=93.20 Aligned_cols=82 Identities=16% Similarity=0.232 Sum_probs=56.2
Q ss_pred CCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH---------HcCCCEEEEcCCcCCCCCc-c---
Q 015367 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE---------AEKPDFIAFTGDNIFGSST-T--- 125 (408)
Q Consensus 59 ~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---------~~~pD~vv~~GDli~~~~~-~--- 125 (408)
+..++|+++||+|++..... ...++.+.+.++ +.+||.||++||+++..+. +
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~---------------~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~ 305 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFL---------------EDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQE 305 (504)
T ss_pred CCccEEEEEcccCCCCcchh---------------HHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccch
Confidence 35799999999999875321 123456667776 6789999999999875321 0
Q ss_pred ---------cHHHHHHHHHhhhHhcCCCEEEEcCCCCCCC
Q 015367 126 ---------DVAESMIQAFGPAMELGLPWAAVLGNHDQES 156 (408)
Q Consensus 126 ---------~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~ 156 (408)
..+..+.+.+.. +...+|+++++||||...
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~-L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 306 EELEIVDIYEQYEAAAEYLKQ-IPEDIKIIISPGNHDAVR 344 (504)
T ss_pred hhccchhhHHHHHHHHHHHHh-hhcCCeEEEecCCCcchh
Confidence 112344445544 345789999999999854
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.2e-06 Score=76.65 Aligned_cols=89 Identities=17% Similarity=0.234 Sum_probs=43.3
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChH-HHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccH----HHHHHHH
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLN-TTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDV----AESMIQA 134 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~----~~~~~~~ 134 (408)
.++|+|.+|+|-....... .......+ .... ..+.+.+..++.+|+ +++..||.+.+...... -....++
T Consensus 5 ~ltILhtnD~Hg~l~~~~~-~~~~~~~~---gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~ 80 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLN-DPNYSADW---GDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPI 80 (282)
T ss_pred eEEEEEEcccccCCcCcCC-cccccCCH---HHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHH
Confidence 6999999999954321100 00000001 1111 112232333344666 66779998865432111 1222333
Q ss_pred HhhhHhcCCCEEEEcCCCCCCCC
Q 015367 135 FGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 135 l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
+. ..++. ++++||||+...
T Consensus 81 mN---~mgyD-a~tlGNHEFd~g 99 (282)
T cd07407 81 FR---MMPYD-LLTIGNHELYNY 99 (282)
T ss_pred HH---hcCCc-EEeecccccCcc
Confidence 32 23444 568899999643
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.46 E-value=3e-05 Score=82.45 Aligned_cols=74 Identities=20% Similarity=0.287 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcCCeEEEEec
Q 015367 247 LRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVG 326 (408)
Q Consensus 247 l~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~G 326 (408)
++-+++...+++++ ...-+|++.|--+...... .+ ..++.. .+.+.++|++|+.|
T Consensus 230 veaa~~~v~~Lr~~---------GaDvIIaLsH~G~~~d~~~-----~~---------~ena~~--~l~~v~gID~IlgG 284 (780)
T PRK09418 230 VETAKKMVPKMKAE---------GADVIVALAHSGVDKSGYN-----VG---------MENASY--YLTEVPGVDAVLMG 284 (780)
T ss_pred HHHHHHHHHHHHhc---------CCCEEEEEeccCccccccc-----cc---------chhhhH--HHhcCCCCCEEEEC
Confidence 44455665566532 4567888999876531100 00 012211 14566789999999
Q ss_pred cCCCCCcccCCCCeEEEEeC
Q 015367 327 HDHTNDFCGNLNGIWFCYGG 346 (408)
Q Consensus 327 H~H~n~~~~~~~gi~~~~~~ 346 (408)
|.|. .+....+|+.++.++
T Consensus 285 HsH~-~~~~~ingv~vvqaG 303 (780)
T PRK09418 285 HSHT-EVKDVFNGVPVVMPG 303 (780)
T ss_pred CCCC-cccccCCCEEEEEcC
Confidence 9999 466667888777664
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.1e-07 Score=82.76 Aligned_cols=70 Identities=24% Similarity=0.269 Sum_probs=46.3
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
||+++|||+|.. . ..++.+.+.++.. ..|.|+++||+++.+.. ..+.+...+. +.
T Consensus 1 m~~~~IsDIHG~-~-------------------~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~--s~~v~~~l~~-~~ 57 (235)
T PHA02239 1 MAIYVVPDIHGE-Y-------------------QKLLTIMDKINNERKPEETIVFLGDYVDRGKR--SKDVVNYIFD-LM 57 (235)
T ss_pred CeEEEEECCCCC-H-------------------HHHHHHHHHHhhcCCCCCEEEEecCcCCCCCC--hHHHHHHHHH-Hh
Confidence 589999999932 1 2245566666443 35999999999986643 2333333332 33
Q ss_pred hcCCCEEEEcCCCCC
Q 015367 140 ELGLPWAAVLGNHDQ 154 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~ 154 (408)
..+.++++++||||.
T Consensus 58 ~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 58 SNDDNVVTLLGNHDD 72 (235)
T ss_pred hcCCCeEEEECCcHH
Confidence 446789999999995
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.6e-05 Score=72.23 Aligned_cols=83 Identities=20% Similarity=0.212 Sum_probs=43.8
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc----CC-CEEEEcCCcCCCCCcccH--HHHHHHH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE----KP-DFIAFTGDNIFGSSTTDV--AESMIQA 134 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~p-D~vv~~GDli~~~~~~~~--~~~~~~~ 134 (408)
++|++.+|+|-.-...... ..+...+..+.+.+++. +| -+++-+||++.+...... .....+.
T Consensus 1 ltIl~tnD~Hg~l~~~~~~----------~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~ 70 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTG----------EYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRG 70 (285)
T ss_pred CEEEEEcccccccccCCCC----------CccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHH
Confidence 5799999999764331100 01233334444444432 34 488999997744321110 0111222
Q ss_pred HhhhHhcCCCEEEEcCCCCCCCCC
Q 015367 135 FGPAMELGLPWAAVLGNHDQESTM 158 (408)
Q Consensus 135 l~~~~~~~~p~~~v~GNHD~~~~~ 158 (408)
+ ...++-+. ++||||+..+.
T Consensus 71 ~---n~~g~Da~-~~GNHEfD~G~ 90 (285)
T cd07405 71 M---NLVGYDAM-AVGNHEFDNPL 90 (285)
T ss_pred H---HhhCCcEE-eecccccccCH
Confidence 2 23366655 66999997653
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=3e-05 Score=80.40 Aligned_cols=84 Identities=20% Similarity=0.232 Sum_probs=43.7
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc----CC-CEEEEcCCcCCCCCcccHH--HHHHH
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE----KP-DFIAFTGDNIFGSSTTDVA--ESMIQ 133 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~p-D~vv~~GDli~~~~~~~~~--~~~~~ 133 (408)
.++|++++|+|-....... . +.+...+..+.+.++++ +| -+++.+||.+.+....... ....+
T Consensus 34 ~ltil~tnD~Hg~~~~~~~---------~-~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~ 103 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEY---------G-EYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR 103 (551)
T ss_pred EEEEEEecccCCCcccccc---------C-CccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHH
Confidence 5999999999976432110 0 01223333344443322 33 5788999977543211100 11122
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCCCC
Q 015367 134 AFGPAMELGLPWAAVLGNHDQESTM 158 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~~~ 158 (408)
.+ ...++-+. ++||||+..+.
T Consensus 104 ~m---N~~g~Da~-tlGNHEFD~G~ 124 (551)
T PRK09558 104 GM---NLIGYDAM-AVGNHEFDNPL 124 (551)
T ss_pred HH---hcCCCCEE-cccccccCcCH
Confidence 22 23356544 66999997663
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.8e-05 Score=75.71 Aligned_cols=93 Identities=24% Similarity=0.397 Sum_probs=61.4
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcc-cHHHHHHHHH---
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTT-DVAESMIQAF--- 135 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~-~~~~~~~~~l--- 135 (408)
+.+||++.||.|+|.......+. .....+++.+.....+.+.|+|+++|||+...... .......+.|
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg--------~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~lLRry 83 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRG--------DDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLELLRRY 83 (646)
T ss_pred cceEEEEeecCccccccCCcccc--------cchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHHHHHH
Confidence 67999999999999876432221 12345677788888889999999999988655421 1111111111
Q ss_pred ------------------------------hhhHhcCCCEEEEcCCCCCCCCCCH
Q 015367 136 ------------------------------GPAMELGLPWAAVLGNHDQESTMDR 160 (408)
Q Consensus 136 ------------------------------~~~~~~~~p~~~v~GNHD~~~~~~~ 160 (408)
.+.+.-.+|||.|-||||...+...
T Consensus 84 ClgdkP~~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDpSG~~~ 138 (646)
T KOG2310|consen 84 CLGDKPVQLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDPSGDGR 138 (646)
T ss_pred ccCCCceeeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCCccccc
Confidence 1122347899999999999876543
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.8e-06 Score=80.49 Aligned_cols=194 Identities=16% Similarity=0.204 Sum_probs=106.7
Q ss_pred HHHHHHHcCCCEEEEcCCcCCCCCccc----------------------HHHHH---------HHHHhhhHhcCCCEEEE
Q 015367 100 LKRIIEAEKPDFIAFTGDNIFGSSTTD----------------------VAESM---------IQAFGPAMELGLPWAAV 148 (408)
Q Consensus 100 ~~~~i~~~~pD~vv~~GDli~~~~~~~----------------------~~~~~---------~~~l~~~~~~~~p~~~v 148 (408)
+-+.+.+++|||||+.||.|+.++... ..+++ ...|+. ..+.+||++.
T Consensus 160 aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqa-ahA~~Pwi~~ 238 (522)
T COG3540 160 AYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQA-AHAAFPWIVQ 238 (522)
T ss_pred HHHHHHhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHH-hhccCCEEEE
Confidence 445667789999999999998775310 01111 122222 2468999999
Q ss_pred cCCCCCCCCCCHHH-------------------HHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCC
Q 015367 149 LGNHDQESTMDREE-------------------LMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGP 209 (408)
Q Consensus 149 ~GNHD~~~~~~~~~-------------------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~ 209 (408)
+-.||..++.+... ...|++.+|.......+ .+.-|-.+.++
T Consensus 239 WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~-----------------~~~lYR~~tyG-- 299 (522)
T COG3540 239 WDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPT-----------------DGRLYRSFTYG-- 299 (522)
T ss_pred eccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCc-----------------cceeeeeeccc--
Confidence 99999987642211 01122223322111110 01112233322
Q ss_pred CCCCCCCcceeEEEEEeCCCCCCcC----Cc---------CcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEE
Q 015367 210 PGSHLANSSILNLFFLDSGDRETVR----GV---------RTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLA 276 (408)
Q Consensus 210 ~~~~~~~~~~~~~i~LDS~~~~~~~----~~---------~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv 276 (408)
+.+.+.+||+..|.... +. .....++++|.+||+..|... +..+.|+
T Consensus 300 --------~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~S------------katWnVi 359 (522)
T COG3540 300 --------PLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGAS------------KATWNVI 359 (522)
T ss_pred --------cccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhc------------chhhhhh
Confidence 34679999998775211 11 123468999999999998775 4677777
Q ss_pred EecCCCCCcccccc---CCcccccccccccCCCChHHHHHHHhcCCe--EEEEeccCCCCCccc
Q 015367 277 FFHIPIPETPQLYY---QNIVGQFQEAVACSRVNSGVLQTLVSLGDI--KAVFVGHDHTNDFCG 335 (408)
Q Consensus 277 ~~HhPl~~~~~~~~---~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V--~~v~~GH~H~n~~~~ 335 (408)
..-.|+........ ....-+....-.-+....+++.-|...+ + .++|.|-+|. .+..
T Consensus 360 a~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~-~~N~V~LtgDvH~-~wA~ 421 (522)
T COG3540 360 AQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRK-IRNTVVLTGDVHY-SWAH 421 (522)
T ss_pred hhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcC-CCCcEEEechhHH-HHHh
Confidence 77777643221111 0000000000111234457888777664 5 4899999997 4444
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-06 Score=76.33 Aligned_cols=78 Identities=22% Similarity=0.290 Sum_probs=45.6
Q ss_pred EEEeccCcCCCCccccCccccccccccCC-hHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEFKYCSD-LNTTRFLKRIIEAE--KPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
.++||+|+|......... + .... ....+.+.+.+++. ++|.|+++||+++..... ...+.++ +.
T Consensus 2 ~~isD~Hlg~~~~~~~~~--~----~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~----~~~~~l~---~~ 68 (168)
T cd07390 2 YFTSDTHFGHANILRFCN--R----PFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAG----TELELLS---RL 68 (168)
T ss_pred eEecccccCCHHHHccCC--C----CCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChH----HHHHHHH---hC
Confidence 479999999864321000 0 0001 11234455555553 789999999987654321 1122322 34
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
+.|+++|+||||..
T Consensus 69 ~~~~~~v~GNHD~~ 82 (168)
T cd07390 69 NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCeEEEeCCCCch
Confidence 67899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.1e-05 Score=79.74 Aligned_cols=230 Identities=22% Similarity=0.208 Sum_probs=112.9
Q ss_pred CCeEEEEEeccCcCCCCcc-ccCccccccccccCChHHHHHHHHHHHHcC-CCEEEEcCCcCCCCCcccH---HHHHHHH
Q 015367 60 GTFKILQVADMHYGMGKVT-RCRDVTATEFKYCSDLNTTRFLKRIIEAEK-PDFIAFTGDNIFGSSTTDV---AESMIQA 134 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-pD~vv~~GDli~~~~~~~~---~~~~~~~ 134 (408)
..++|+|.+|+|-...... .++... ..+......+++.++++. ..++|-+||++++...... .....+.
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~------~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~ 98 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDT------DGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDL 98 (517)
T ss_pred eeEEEEEeccccccceeccccccCcc------cccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHH
Confidence 3699999999998765211 111000 012233344555555544 4689999999876432111 1222333
Q ss_pred HhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHH--ccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCC
Q 015367 135 FGPAMELGLPWAAVLGNHDQESTMDREELMYFISL--MDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGS 212 (408)
Q Consensus 135 l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~ 212 (408)
|. ..++- +.+.||||+..+. +.+.++... +|.-...+..... .+ ......|..+.+.+
T Consensus 99 mN---~m~yD-a~tiGNHEFd~g~--~~l~~~~~~~~fp~l~aNv~~~~~------~~----~~~~~Py~I~~~~g---- 158 (517)
T COG0737 99 LN---ALGYD-AMTLGNHEFDYGL--EALARLLDEAKFPVLSANVYDKNS------TG----PPFFKPYAIKEVGG---- 158 (517)
T ss_pred Hh---hcCCc-EEeecccccccCH--HHHHHHHhccCCceEEeeeEecCC------CC----ccCcCCeEEEecCC----
Confidence 33 22444 5577999997653 334444332 2321111111100 00 01111233333332
Q ss_pred CCCCcceeEEEEEeCCCCCCcCCc-CcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccC
Q 015367 213 HLANSSILNLFFLDSGDRETVRGV-RTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQ 291 (408)
Q Consensus 213 ~~~~~~~~~~i~LDS~~~~~~~~~-~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~ 291 (408)
..+.++.+-+......... ...++.=.+..+++++.+.+++++ ...-+|++.|-++........
T Consensus 159 -----~KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~---------~vD~iI~LsH~G~~~d~~~~~- 223 (517)
T COG0737 159 -----VKIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGE---------GVDVIIALSHLGIEDDLELAS- 223 (517)
T ss_pred -----eEEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhc---------CCCEEEEEeccCcCccccccc-
Confidence 3466777765221111100 112333346788888888888732 256789999988864322110
Q ss_pred CcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCC----CcccCCCCeEEEEeC
Q 015367 292 NIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTN----DFCGNLNGIWFCYGG 346 (408)
Q Consensus 292 ~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n----~~~~~~~gi~~~~~~ 346 (408)
...+. ..... +.+++++.||.|.. ......+|+.++.++
T Consensus 224 ~~~~~-----------~~~~~-----~~iD~i~~GH~H~~~~~~~~~~~~~~t~ivqag 266 (517)
T COG0737 224 EVPGD-----------VDVAV-----PGIDLIIGGHSHTVFPGGDKPGTVNGTPIVQAG 266 (517)
T ss_pred ccccc-----------ccccc-----cCcceEeccCCcccccCCcccCccCCEEEEccC
Confidence 00000 00000 34999999999962 111234566676664
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.4e-06 Score=75.22 Aligned_cols=91 Identities=22% Similarity=0.233 Sum_probs=56.2
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc--ccHHHHHHHHHhhh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST--TDVAESMIQAFGPA 138 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~--~~~~~~~~~~l~~~ 138 (408)
.-+.+++||+|+|......-+...-.. ++-..+.+.+.+.++..+|+-||+.||+-.+.+. ..++..+...++.
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~---~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~- 94 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPR---YQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLEL- 94 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCc---hhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHH-
Confidence 357999999999976543211111111 1222344556668888999999999997655443 2233444444432
Q ss_pred HhcCCCEEEEcCCCCCCC
Q 015367 139 MELGLPWAAVLGNHDQES 156 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~~ 156 (408)
.+.. -|.+|.||||.+.
T Consensus 95 ~~~~-evi~i~GNHD~~i 111 (235)
T COG1407 95 LDER-EVIIIRGNHDNGI 111 (235)
T ss_pred hccC-cEEEEeccCCCcc
Confidence 2222 5999999999864
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00018 Score=76.84 Aligned_cols=98 Identities=26% Similarity=0.374 Sum_probs=51.4
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccHH-----------
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDVA----------- 128 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~~----------- 128 (408)
.++|++.+|+|-.-.......+ .+. ...+...+..+++.++++.++ ++|..||++.+....+..
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~-~~~---~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~ 190 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQD-KPS---QTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQ 190 (814)
T ss_pred EEEEEEEEeecCCccccccccc-Ccc---ccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcc
Confidence 5899999999976433211000 000 011333344455555555554 788999988654321110
Q ss_pred HHHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 129 ESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 129 ~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
....++|. ..++. ..++||||+..+. +.+.++..
T Consensus 191 ~P~i~amN---~LGyD-A~tLGNHEFDyG~--d~L~~~l~ 224 (814)
T PRK11907 191 HPMYAALE---ALGFD-AGTLGNHEFNYGL--DYLEKVIA 224 (814)
T ss_pred hHHHHHHh---ccCCC-EEEechhhcccCH--HHHHHHHH
Confidence 01223332 33555 5588999997653 33444444
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00013 Score=69.90 Aligned_cols=88 Identities=23% Similarity=0.304 Sum_probs=46.7
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc----CC-CEEEEcCCcCCCCCcccH---------
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE----KP-DFIAFTGDNIFGSSTTDV--------- 127 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~p-D~vv~~GDli~~~~~~~~--------- 127 (408)
++|+|.+|+|-...... +...+..+.+.+++. .+ -+++.+||++.+......
T Consensus 1 l~IlhtnD~Hg~~~~~g--------------g~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~ 66 (313)
T cd08162 1 LQLLHTSDGESGLLAED--------------DAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGD 66 (313)
T ss_pred CeEEEecccccCccccC--------------CHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhcccccccc
Confidence 47999999997643211 122333444444433 33 489999997754321100
Q ss_pred -HHHHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 128 -AESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 128 -~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
-....+++. ..++. ++++||||+..+ .+.+.++.+.
T Consensus 67 ~G~~~i~~mN---~~g~D-a~tlGNHEFD~G--~~~L~~~~~~ 103 (313)
T cd08162 67 PGRADILILN---ALGVQ-AIALGNHEFDLG--TDELADLIRP 103 (313)
T ss_pred CChHHHHHHh---ccCCc-EEeccccccccC--HHHHHHHHHh
Confidence 011222222 33555 457899998654 3445555444
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00012 Score=75.65 Aligned_cols=98 Identities=17% Similarity=0.220 Sum_probs=47.9
Q ss_pred eEEEEEeccCcCCCCccc----cCccccccccccCChHHHHHHHHHHHHcCC-CEEEEcCCcCCCCCcccHH--HHHHHH
Q 015367 62 FKILQVADMHYGMGKVTR----CRDVTATEFKYCSDLNTTRFLKRIIEAEKP-DFIAFTGDNIFGSSTTDVA--ESMIQA 134 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p-D~vv~~GDli~~~~~~~~~--~~~~~~ 134 (408)
++|+|++|+|-.-..... +.+. ...+..+...+..+.+.+++..| -+++.+||.+.+....... +...+.
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~---~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~ 77 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQ---LKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAAL 77 (550)
T ss_pred CEEEEEccccccccCcccccccCCCc---cccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHH
Confidence 579999999965332110 0000 00011233333444444444445 5888999987543211111 111222
Q ss_pred HhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 135 FGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 135 l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
+. ..++- ++++||||+..+. +.+.++..
T Consensus 78 ~N---~~g~D-a~~lGNHEFd~G~--~~l~~~~~ 105 (550)
T TIGR01530 78 MN---AAGFD-FFTLGNHEFDAGN--EGLKEFLE 105 (550)
T ss_pred Hh---ccCCC-EEEeccccccCCH--HHHHHHHH
Confidence 22 23444 6688999997553 33444443
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00026 Score=74.26 Aligned_cols=98 Identities=24% Similarity=0.267 Sum_probs=50.9
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCC-CEEEEcCCcCCCCCcccHH----------H
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKP-DFIAFTGDNIFGSSTTDVA----------E 129 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p-D~vv~~GDli~~~~~~~~~----------~ 129 (408)
.++|++.+|+|-.-.......+ .+. .+.+...+..+++.++++.+ -++|-.||++.+....+.. .
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~-~~~---~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~ 77 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKD-KPT---DKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMH 77 (626)
T ss_pred eEEEEEEcCCccCccCCcccCC-CCC---CCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcC
Confidence 4899999999976443211000 000 01233444455555554444 4788999988654321110 1
Q ss_pred HHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 130 SMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 130 ~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
...++|. ..++- ..++||||+..+. +.+.++..
T Consensus 78 p~~~~mN---~lgyD-a~tlGNHEFd~G~--~~L~~~~~ 110 (626)
T TIGR01390 78 PVYKAMN---LLKYD-VGNLGNHEFNYGL--PFLKQAIA 110 (626)
T ss_pred hHHHHHh---hcCcc-EEecccccccccH--HHHHHHHH
Confidence 1222222 33555 4688999987553 33444444
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00022 Score=74.95 Aligned_cols=98 Identities=24% Similarity=0.298 Sum_probs=51.1
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCC-CEEEEcCCcCCCCCcccHHH----------
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKP-DFIAFTGDNIFGSSTTDVAE---------- 129 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p-D~vv~~GDli~~~~~~~~~~---------- 129 (408)
.++|++.+|+|-.-.......+ .+. ...++..+..+++.++++.+ -++|-.||++.+....+...
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~-~~~---~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~ 100 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKD-KPT---EKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVH 100 (649)
T ss_pred eEEEEEEcccccCccCCccccC-Ccc---cccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcc
Confidence 5999999999976433211000 000 01233344555555555555 47889999886543211110
Q ss_pred HHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 130 SMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 130 ~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
...+++. ..++- ..++||||+..+. +.+.+...
T Consensus 101 p~i~amN---~lgyD-a~tlGNHEFd~G~--~~L~~~~~ 133 (649)
T PRK09420 101 PVYKAMN---TLDYD-VGNLGNHEFNYGL--DYLKKALA 133 (649)
T ss_pred hHHHHHH---hcCCc-EEeccchhhhcCH--HHHHHHHh
Confidence 1222322 33555 5588999986543 33444433
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00018 Score=67.04 Aligned_cols=48 Identities=17% Similarity=0.177 Sum_probs=30.1
Q ss_pred cCCCEEEEcCCcCCCCCccc-----------HHHHHHHHHhhhHhcCCCEEEEcCCCCC
Q 015367 107 EKPDFIAFTGDNIFGSSTTD-----------VAESMIQAFGPAMELGLPWAAVLGNHDQ 154 (408)
Q Consensus 107 ~~pD~vv~~GDli~~~~~~~-----------~~~~~~~~l~~~~~~~~p~~~v~GNHD~ 154 (408)
.++|+||++||+-......+ ....+.+.+......++|+++|.||||.
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~ 85 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEA 85 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCC
Confidence 47999999999643322111 1122333333334468889999999995
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=6.6e-06 Score=77.15 Aligned_cols=67 Identities=24% Similarity=0.268 Sum_probs=43.6
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH-HcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE-AEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
|++++|||+|-... .++.+.+.++ ..++|.++++||+|+.+. +..+.+. .+. +
T Consensus 1 M~~~vIGDIHG~~~--------------------~l~~ll~~~~~~~~~D~li~lGDlVdrGp--~s~~vl~-~l~---~ 54 (275)
T PRK00166 1 MATYAIGDIQGCYD--------------------ELQRLLEKIDFDPAKDTLWLVGDLVNRGP--DSLEVLR-FVK---S 54 (275)
T ss_pred CcEEEEEccCCCHH--------------------HHHHHHHhcCCCCCCCEEEEeCCccCCCc--CHHHHHH-HHH---h
Confidence 57999999994322 2333444333 246899999999997664 3333332 222 2
Q ss_pred cCCCEEEEcCCCCC
Q 015367 141 LGLPWAAVLGNHDQ 154 (408)
Q Consensus 141 ~~~p~~~v~GNHD~ 154 (408)
.+.++++|.||||.
T Consensus 55 l~~~~~~VlGNHD~ 68 (275)
T PRK00166 55 LGDSAVTVLGNHDL 68 (275)
T ss_pred cCCCeEEEecChhH
Confidence 35678999999997
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.3e-05 Score=72.31 Aligned_cols=65 Identities=20% Similarity=0.135 Sum_probs=40.8
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH-cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
||++|||+|-.. ..++.+.+.+.. .++|.|+++||+++.+.. ..+.+ +.+ ..
T Consensus 2 ri~~isDiHg~~--------------------~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~--~~~~~-~~l----~~ 54 (207)
T cd07424 2 RDFVVGDIHGHY--------------------SLLQKALDAVGFDPARDRLISVGDLIDRGPE--SLACL-ELL----LE 54 (207)
T ss_pred CEEEEECCCCCH--------------------HHHHHHHHHcCCCCCCCEEEEeCCcccCCCC--HHHHH-HHH----hc
Confidence 689999999321 123334443332 368999999999876542 22222 222 22
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
.++++|.||||..
T Consensus 55 -~~~~~v~GNhe~~ 67 (207)
T cd07424 55 -PWFHAVRGNHEQM 67 (207)
T ss_pred -CCEEEeECCChHH
Confidence 4689999999964
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0028 Score=58.81 Aligned_cols=61 Identities=23% Similarity=0.414 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 99 FLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 99 ~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
.+.+..++.++|+++..||...+..... ....+. +...++.++ +.|||++... ++.+++..
T Consensus 20 ~l~~lk~~~~~D~vi~NgEn~~gg~gl~--~~~~~~---L~~~G~D~i-TlGNH~fD~g----el~~~l~~ 80 (255)
T cd07382 20 HLPKLKKEYKIDFVIANGENAAGGKGIT--PKIAKE---LLSAGVDVI-TMGNHTWDKK----EILDFIDE 80 (255)
T ss_pred HHHHHHHHCCCCEEEECCccccCCCCCC--HHHHHH---HHhcCCCEE-EecccccCcc----hHHHHHhc
Confidence 3444445678999999999876542211 222222 345577766 4599998655 34555443
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.1e-05 Score=69.84 Aligned_cols=49 Identities=16% Similarity=0.038 Sum_probs=30.5
Q ss_pred cCCCEEEEcCCcCCCCCcccHH-HHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 107 EKPDFIAFTGDNIFGSSTTDVA-ESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 107 ~~pD~vv~~GDli~~~~~~~~~-~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
.+.|.++++||+++.+...... +.+.+.-....+.+.++++++||||..
T Consensus 31 ~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 31 GGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 3689999999999776432211 112111111123467899999999974
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.9e-05 Score=71.47 Aligned_cols=69 Identities=17% Similarity=0.087 Sum_probs=42.5
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH----H------cCCCEEEEcCCcCCCCCcccHHHHH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE----A------EKPDFIAFTGDNIFGSSTTDVAESM 131 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~------~~pD~vv~~GDli~~~~~~~~~~~~ 131 (408)
+||+++||+|-... .++.+.+.+. + .+.|.++++||+|+.+.. ..+.+
T Consensus 1 ~~i~vigDIHG~~~--------------------~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~--s~evl 58 (234)
T cd07423 1 GPFDIIGDVHGCYD--------------------ELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD--SPEVL 58 (234)
T ss_pred CCeEEEEECCCCHH--------------------HHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC--HHHHH
Confidence 47999999996432 2333444331 1 136899999999987643 22333
Q ss_pred HHHHhhhHhcCCCEEEEcCCCCC
Q 015367 132 IQAFGPAMELGLPWAAVLGNHDQ 154 (408)
Q Consensus 132 ~~~l~~~~~~~~p~~~v~GNHD~ 154 (408)
+.+..+ .....+++|.||||.
T Consensus 59 -~~l~~l-~~~~~~~~v~GNHE~ 79 (234)
T cd07423 59 -RLVMSM-VAAGAALCVPGNHDN 79 (234)
T ss_pred -HHHHHH-hhCCcEEEEECCcHH
Confidence 333332 223468899999996
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00012 Score=64.58 Aligned_cols=57 Identities=23% Similarity=0.193 Sum_probs=35.4
Q ss_pred HHHHHHHcCCCEEEEcCCcCCCCCccc-----HHHHHHHHHhhhHh---------------cCCCEEEEcCCCCCCC
Q 015367 100 LKRIIEAEKPDFIAFTGDNIFGSSTTD-----VAESMIQAFGPAME---------------LGLPWAAVLGNHDQES 156 (408)
Q Consensus 100 ~~~~i~~~~pD~vv~~GDli~~~~~~~-----~~~~~~~~l~~~~~---------------~~~p~~~v~GNHD~~~ 156 (408)
...+....+||.|+++|||++..-..+ ...++.+.+-.-.. .++|++.|+||||...
T Consensus 36 ~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 36 VSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 334445689999999999997643211 12333333311000 1489999999999964
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=6.3e-05 Score=69.67 Aligned_cols=42 Identities=19% Similarity=0.005 Sum_probs=27.9
Q ss_pred CCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCC
Q 015367 109 PDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQ 154 (408)
Q Consensus 109 pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~ 154 (408)
-|.+|++||+||.+. ++.+.+.-+ ..+ ....+++++.||||.
T Consensus 37 ~d~li~lGDliDRGp--~S~~vl~~~-~~~-~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 37 QRKLAFVGDLTDRGP--HSLRMIEIV-WEL-VEKKAAYYVPGNHCN 78 (245)
T ss_pred CCEEEEECcccCCCc--ChHHHHHHH-HHH-hhCCCEEEEeCccHH
Confidence 479999999998764 333333322 222 234579999999984
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=5.1e-05 Score=68.98 Aligned_cols=65 Identities=25% Similarity=0.140 Sum_probs=41.5
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH-cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
-|+.+|||+|-... .++.+.+.++. .+.|.++++||+|+.+.. ..+.+. .+. +
T Consensus 17 ~ri~vigDIHG~~~--------------------~L~~lL~~i~~~~~~D~li~lGDlvDrGp~--s~~vl~-~l~---~ 70 (218)
T PRK11439 17 RHIWLVGDIHGCFE--------------------QLMRKLRHCRFDPWRDLLISVGDLIDRGPQ--SLRCLQ-LLE---E 70 (218)
T ss_pred CeEEEEEcccCCHH--------------------HHHHHHHhcCCCcccCEEEEcCcccCCCcC--HHHHHH-HHH---c
Confidence 48999999996432 23334444432 257999999999987643 333332 221 1
Q ss_pred cCCCEEEEcCCCCC
Q 015367 141 LGLPWAAVLGNHDQ 154 (408)
Q Consensus 141 ~~~p~~~v~GNHD~ 154 (408)
..+++|.||||.
T Consensus 71 --~~~~~v~GNHE~ 82 (218)
T PRK11439 71 --HWVRAVRGNHEQ 82 (218)
T ss_pred --CCceEeeCchHH
Confidence 246789999995
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=6.9e-05 Score=68.12 Aligned_cols=65 Identities=20% Similarity=0.217 Sum_probs=41.2
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH-HcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE-AEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
-||++|||+|-.. ..++.+.+.+. ..+.|.++++||+++.+.. ..+.+. .+ .
T Consensus 15 ~ri~visDiHg~~--------------------~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~--~~~~l~-~l----~ 67 (218)
T PRK09968 15 RHIWVVGDIHGEY--------------------QLLQSRLHQLSFCPETDLLISVGDNIDRGPE--SLNVLR-LL----N 67 (218)
T ss_pred CeEEEEEeccCCH--------------------HHHHHHHHhcCCCCCCCEEEECCCCcCCCcC--HHHHHH-HH----h
Confidence 3899999999532 12333333333 2468999999999976643 223332 22 1
Q ss_pred cCCCEEEEcCCCCC
Q 015367 141 LGLPWAAVLGNHDQ 154 (408)
Q Consensus 141 ~~~p~~~v~GNHD~ 154 (408)
. ..+++|.||||.
T Consensus 68 ~-~~~~~v~GNHE~ 80 (218)
T PRK09968 68 Q-PWFISVKGNHEA 80 (218)
T ss_pred h-CCcEEEECchHH
Confidence 1 247899999996
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.60 E-value=7.4e-05 Score=68.08 Aligned_cols=55 Identities=20% Similarity=0.083 Sum_probs=34.8
Q ss_pred HHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 98 RFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 98 ~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
..+.+.+...++|.+|++||+++.+.. ..+.+. .+..+...+.+++++.||||..
T Consensus 14 ~~~l~~~~~~~~d~li~lGD~vdrg~~--~~~~l~-~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 14 LRLLEKIGFPPNDKLIFLGDYVDRGPD--SVEVID-LLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred HHHHHHhCCCCCCEEEEECCEeCCCCC--cHHHHH-HHHHhcCCCCcEEEEccCchhh
Confidence 445555544678999999999987643 222222 2222211156899999999974
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.56 E-value=9.4e-05 Score=68.66 Aligned_cols=65 Identities=25% Similarity=0.261 Sum_probs=41.3
Q ss_pred EEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH-cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCC
Q 015367 65 LQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGL 143 (408)
Q Consensus 65 ~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~ 143 (408)
.+|+|+|-... .++.+.+.+.. .+.|.++++||+|+.+. +..+.+. .+. +.+.
T Consensus 2 yvIGDIHG~~~--------------------~L~~LL~~i~~~~~~D~Li~lGDlVdRGp--~s~evl~-~l~---~l~~ 55 (257)
T cd07422 2 YAIGDIQGCYD--------------------ELQRLLEKINFDPAKDRLWLVGDLVNRGP--DSLETLR-FVK---SLGD 55 (257)
T ss_pred EEEECCCCCHH--------------------HHHHHHHhcCCCCCCCEEEEecCcCCCCc--CHHHHHH-HHH---hcCC
Confidence 57999995422 23444444432 35799999999998764 3333333 222 2235
Q ss_pred CEEEEcCCCCCC
Q 015367 144 PWAAVLGNHDQE 155 (408)
Q Consensus 144 p~~~v~GNHD~~ 155 (408)
.+.+|.||||..
T Consensus 56 ~v~~VlGNHD~~ 67 (257)
T cd07422 56 SAKTVLGNHDLH 67 (257)
T ss_pred CeEEEcCCchHH
Confidence 789999999973
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00019 Score=67.15 Aligned_cols=70 Identities=17% Similarity=0.141 Sum_probs=42.3
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH------cCCCEEEEcCCcCCCCCcccHHHHHHHHHh
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA------EKPDFIAFTGDNIFGSSTTDVAESMIQAFG 136 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~pD~vv~~GDli~~~~~~~~~~~~~~~l~ 136 (408)
++++|+|+|-... .++.+.+.|.+ ...+.+|++||+|+.+.. ..+.+ +.+.
T Consensus 3 ~iyaIGDIHG~~d--------------------~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPd--S~eVl-d~L~ 59 (304)
T cd07421 3 VVICVGDIHGYIS--------------------KLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPE--TRKVI-DFLI 59 (304)
T ss_pred eEEEEEeccCCHH--------------------HHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCC--HHHHH-HHHH
Confidence 6899999995432 23445444442 235789999999987653 22222 2222
Q ss_pred hhHhcC--CCEEEEcCCCCCC
Q 015367 137 PAMELG--LPWAAVLGNHDQE 155 (408)
Q Consensus 137 ~~~~~~--~p~~~v~GNHD~~ 155 (408)
.+.... ..++++.||||..
T Consensus 60 ~l~~~~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 60 SLPEKHPKQRHVFLCGNHDFA 80 (304)
T ss_pred HhhhcccccceEEEecCChHH
Confidence 222211 2578999999953
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00014 Score=66.32 Aligned_cols=43 Identities=23% Similarity=0.227 Sum_probs=28.8
Q ss_pred CCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCC
Q 015367 108 KPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQ 154 (408)
Q Consensus 108 ~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~ 154 (408)
..|.+|++||+|+.+. +..+.+.. +..+. ....+++|.||||.
T Consensus 33 ~~d~lvflGD~IDRGp--~S~~vl~~-l~~l~-~~~~~~~l~GNHE~ 75 (222)
T cd07413 33 PERQVVFLGDLIDRGP--EIRELLEI-VKSMV-DAGHALAVMGNHEF 75 (222)
T ss_pred CCCEEEEeCcccCCCC--CHHHHHHH-HHHhh-cCCCEEEEEccCcH
Confidence 4689999999998765 33333332 32222 23479999999996
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00015 Score=67.59 Aligned_cols=67 Identities=25% Similarity=0.268 Sum_probs=42.6
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH-HcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE-AEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
|++.+|+|+|-... .++.+.+.++ ....|.++++||+|+.+.. ..+.+. .+. +
T Consensus 1 m~~YvIGDIHGc~d--------------------aL~~LL~~i~f~~~~D~l~~lGDlVdRGP~--slevL~-~l~---~ 54 (279)
T TIGR00668 1 MATYLIGDLHGCYD--------------------ELQALLERVEFDPGQDTLWLTGDLVARGPG--SLEVLR-YVK---S 54 (279)
T ss_pred CcEEEEEcccCCHH--------------------HHHHHHHHhCcCCCCCEEEEeCCccCCCCC--HHHHHH-HHH---h
Confidence 35789999996432 2344555554 2457999999999987653 333332 222 2
Q ss_pred cCCCEEEEcCCCCC
Q 015367 141 LGLPWAAVLGNHDQ 154 (408)
Q Consensus 141 ~~~p~~~v~GNHD~ 154 (408)
.+..+..|.||||.
T Consensus 55 l~~~~~~VlGNHD~ 68 (279)
T TIGR00668 55 LGDAVRLVLGNHDL 68 (279)
T ss_pred cCCCeEEEEChhHH
Confidence 23346789999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.012 Score=54.74 Aligned_cols=72 Identities=17% Similarity=0.226 Sum_probs=43.2
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHH-HHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRF-LKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
|||+++.|+=-... ...++. +.+..++.++|++|..||...++.... ....+ .+.+
T Consensus 1 m~ilfiGDi~G~~G------------------r~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~--~~~~~---~L~~ 57 (266)
T TIGR00282 1 IKFLFIGDVYGKAG------------------RKIVKNNLPQLKSKYQADLVIANGENTTHGKGLT--LKIYE---FLKQ 57 (266)
T ss_pred CeEEEEEecCCHHH------------------HHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCC--HHHHH---HHHh
Confidence 68999999952111 122333 333334568999999999875542111 22222 2346
Q ss_pred cCCCEEEEcCCCCCCCC
Q 015367 141 LGLPWAAVLGNHDQEST 157 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~~ 157 (408)
.++-++.+ |||.+...
T Consensus 58 ~GvDviT~-GNH~~Dkg 73 (266)
T TIGR00282 58 SGVNYITM-GNHTWFQK 73 (266)
T ss_pred cCCCEEEc-cchhccCc
Confidence 68887766 99998654
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0014 Score=54.72 Aligned_cols=83 Identities=23% Similarity=0.283 Sum_probs=46.4
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChH-HHHHH-HHHHHHcCC-CEEEEcCCcCCCCCcccHHHHHHHHHhhh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLN-TTRFL-KRIIEAEKP-DFIAFTGDNIFGSSTTDVAESMIQAFGPA 138 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~ 138 (408)
-.+-++||+|++.......+. +...+ .-+.+ .+..+-.+| |.+.+.||++........+..+ ++.
T Consensus 4 ~mmyfisDtHfgh~nvi~~~p--------fsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~I---ler- 71 (186)
T COG4186 4 TMMYFISDTHFGHKNVISMRP--------FSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLI---LER- 71 (186)
T ss_pred eEEEEecccccCCcceeecCC--------CCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHH---HHH-
Confidence 357789999999765432111 11111 01122 223333455 7899999988766533233333 332
Q ss_pred HhcCCCEEEEcCCCCCCCCC
Q 015367 139 MELGLPWAAVLGNHDQESTM 158 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~~~~ 158 (408)
.+--...|+||||-....
T Consensus 72 --LnGrkhlv~GNhDk~~~~ 89 (186)
T COG4186 72 --LNGRKHLVPGNHDKCHPM 89 (186)
T ss_pred --cCCcEEEeeCCCCCCccc
Confidence 244568899999985443
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.001 Score=61.57 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=53.0
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc-----------CCCEEEEcCCcCCCCCc-------
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE-----------KPDFIAFTGDNIFGSST------- 124 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------~pD~vv~~GDli~~~~~------- 124 (408)
+|+++||+|+|..... ...++.+.+.|..+ +...+|++||.++....
T Consensus 1 ~i~~vSgL~ig~~~~~---------------~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~ 65 (257)
T cd07387 1 YIALVSGLGLGGNAES---------------SLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTK 65 (257)
T ss_pred CEEEEcccccCCCccc---------------hHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhh
Confidence 3899999999987421 13446677777632 33479999999975431
Q ss_pred ------------ccHHHHHHHHHhhhHhcCCCEEEEcCCCCCCCC
Q 015367 125 ------------TDVAESMIQAFGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 125 ------------~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
.+.++.+...+.. +...+|+...|||||-...
T Consensus 66 ~~~~~~~~~~~~~~~~~~ld~~l~~-l~~~i~V~imPG~~Dp~~~ 109 (257)
T cd07387 66 ARYLTKKSSAASVEAVKELDNFLSQ-LASSVPVDLMPGEFDPANH 109 (257)
T ss_pred hhccccccchhhHHHHHHHHHHHHh-hhcCCeEEECCCCCCcccc
Confidence 1123445555554 3568999999999998654
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00098 Score=65.70 Aligned_cols=82 Identities=15% Similarity=0.243 Sum_probs=53.3
Q ss_pred CCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH-----cCCCEEEEcCCcCCCCCc---------
Q 015367 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-----EKPDFIAFTGDNIFGSST--------- 124 (408)
Q Consensus 59 ~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~~pD~vv~~GDli~~~~~--------- 124 (408)
+.++++++|||+|.|...-.. +....+.+.++. .+...++++||.+++-+.
T Consensus 223 ~e~v~v~~isDih~GSk~F~~---------------~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~ 287 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLE---------------DEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELV 287 (481)
T ss_pred CcceEEEEEeeeecccHHHHH---------------HHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccc
Confidence 357899999999998764210 122344455543 245789999999985432
Q ss_pred ----ccHHHHHHHHHhhhHhcCCCEEEEcCCCCCCC
Q 015367 125 ----TDVAESMIQAFGPAMELGLPWAAVLGNHDQES 156 (408)
Q Consensus 125 ----~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~ 156 (408)
.+.++.+.+.|.. +-..+-++..|||||...
T Consensus 288 i~di~~qy~~~A~~L~~-vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 288 IADIYEQYEELAEFLDQ-VPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred cccchHHHHHHHHHHhh-CCCCceEEEecCCCCccc
Confidence 1234555555543 334677999999999854
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0032 Score=59.07 Aligned_cols=72 Identities=15% Similarity=0.119 Sum_probs=44.3
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
.++++++|+|-... .+.++.+.+.....+-+++.||+++.+.. ..+.+.-.+.-....
T Consensus 28 ~~i~vvGDiHG~~~--------------------~l~~ll~~~~~~~~~~~vfLGD~VDrG~~--s~e~l~~l~~lk~~~ 85 (271)
T smart00156 28 APVTVCGDIHGQFD--------------------DLLRLFDLNGPPPDTNYVFLGDYVDRGPF--SIEVILLLFALKILY 85 (271)
T ss_pred CCEEEEEeCcCCHH--------------------HHHHHHHHcCCCCCceEEEeCCccCCCCC--hHHHHHHHHHHHhcC
Confidence 46899999995432 12333333333456889999999986643 333333222211233
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
+-.++.+.||||..
T Consensus 86 p~~v~llrGNHE~~ 99 (271)
T smart00156 86 PNRVVLLRGNHESR 99 (271)
T ss_pred CCCEEEEeccccHH
Confidence 55689999999984
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.005 Score=58.77 Aligned_cols=71 Identities=14% Similarity=0.063 Sum_probs=43.6
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcC
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELG 142 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 142 (408)
++++++|+|-... .+.++.+.+.....+-+++.||++|.+. ...+.+...+.-.+..+
T Consensus 44 ~i~ViGDIHG~~~--------------------dL~~l~~~~g~~~~~~ylFLGDyVDRG~--~s~Evi~lL~~lki~~p 101 (305)
T cd07416 44 PVTVCGDIHGQFY--------------------DLLKLFEVGGSPANTRYLFLGDYVDRGY--FSIECVLYLWALKILYP 101 (305)
T ss_pred CEEEEEeCCCCHH--------------------HHHHHHHhcCCCCCceEEEECCccCCCC--ChHHHHHHHHHHHhhcC
Confidence 5899999995432 1223334333344589999999998764 33344433332112334
Q ss_pred CCEEEEcCCCCCC
Q 015367 143 LPWAAVLGNHDQE 155 (408)
Q Consensus 143 ~p~~~v~GNHD~~ 155 (408)
.-++.+.||||..
T Consensus 102 ~~v~lLRGNHE~~ 114 (305)
T cd07416 102 KTLFLLRGNHECR 114 (305)
T ss_pred CCEEEEeCCCcHH
Confidence 5689999999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.014 Score=54.43 Aligned_cols=92 Identities=15% Similarity=0.087 Sum_probs=56.8
Q ss_pred eeeccccccccCCCCCCccccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--------C
Q 015367 37 LQISHDKIHLKKYPDLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--------K 108 (408)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~ 108 (408)
..+++|++.++++ +...+|+++||+|+.... +++.+.+++... .
T Consensus 12 ~~~~~~~~~~~~~---------~~~~~~VilSDV~LD~p~-------------------tl~~L~kvf~~y~~~~~~~~~ 63 (291)
T PTZ00235 12 KEVEEYEIIVRKN---------DKRHNWIIMHDVYLDSPY-------------------TFEVLDKMLSLYVNTYPENEL 63 (291)
T ss_pred cccceEEEEEecC---------CCceEEEEEEeeccCCHH-------------------HHHHHHHHHHHhhccCcccCC
Confidence 3477888877653 246899999999998653 345555554432 3
Q ss_pred CCEEEEcCCcCCCC-----CcccHHHHHHHHHhhh-------HhcCCCEEEEcCCCCCCC
Q 015367 109 PDFIAFTGDNIFGS-----STTDVAESMIQAFGPA-------MELGLPWAAVLGNHDQES 156 (408)
Q Consensus 109 pD~vv~~GDli~~~-----~~~~~~~~~~~~l~~~-------~~~~~p~~~v~GNHD~~~ 156 (408)
|-.+|+.|+.+... .....+..-.+.|+.+ +....-+++|||-.|-+.
T Consensus 64 P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 64 PVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLILEHCYLIFIPGINDPCA 123 (291)
T ss_pred CeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHHhcCeEEEECCCCCCCc
Confidence 88999999977553 1111122222222221 233566899999999854
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0071 Score=57.38 Aligned_cols=71 Identities=14% Similarity=0.057 Sum_probs=42.5
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcC
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELG 142 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 142 (408)
.+++++|+|-... .+..+.+.......+-+|+.||+++.+.. ..+.+.-.+.-....+
T Consensus 51 ~i~viGDIHG~~~--------------------~L~~l~~~~~~~~~~~~lfLGDyVDRG~~--s~e~i~ll~~lk~~~p 108 (293)
T cd07414 51 PLKICGDIHGQYY--------------------DLLRLFEYGGFPPESNYLFLGDYVDRGKQ--SLETICLLLAYKIKYP 108 (293)
T ss_pred ceEEEEecCCCHH--------------------HHHHHHHhcCCCCcceEEEEeeEecCCCC--cHHHHHHHHHhhhhCC
Confidence 4889999995322 12233333333455789999999987643 2333332222112334
Q ss_pred CCEEEEcCCCCCC
Q 015367 143 LPWAAVLGNHDQE 155 (408)
Q Consensus 143 ~p~~~v~GNHD~~ 155 (408)
-.++.+.||||..
T Consensus 109 ~~i~llrGNHE~~ 121 (293)
T cd07414 109 ENFFLLRGNHECA 121 (293)
T ss_pred CcEEEEecccchh
Confidence 4589999999985
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.007 Score=57.17 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=42.0
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcC
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELG 142 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 142 (408)
.+.+++|+|-... .+..+.+.......+-+|++||++|.+. ...+.+.-.+.-....+
T Consensus 43 ~i~vvGDIHG~~~--------------------dL~~ll~~~~~~~~~~~lfLGDyVDRG~--~s~evl~ll~~lk~~~p 100 (285)
T cd07415 43 PVTVCGDIHGQFY--------------------DLLELFRVGGDPPDTNYLFLGDYVDRGY--YSVETFLLLLALKVRYP 100 (285)
T ss_pred CEEEEEeCCCCHH--------------------HHHHHHHHcCCCCCCeEEEEeEECCCCc--CHHHHHHHHHHHhhcCC
Confidence 4889999995322 1222333332334578999999997764 23333332221112334
Q ss_pred CCEEEEcCCCCCC
Q 015367 143 LPWAAVLGNHDQE 155 (408)
Q Consensus 143 ~p~~~v~GNHD~~ 155 (408)
-.++.+.||||..
T Consensus 101 ~~v~llrGNHE~~ 113 (285)
T cd07415 101 DRITLLRGNHESR 113 (285)
T ss_pred CcEEEEecccchH
Confidence 5699999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.008 Score=57.59 Aligned_cols=70 Identities=19% Similarity=0.133 Sum_probs=42.6
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--C--CCEEEEcCCcCCCCCcccHHHHHHHHHhh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--K--PDFIAFTGDNIFGSSTTDVAESMIQAFGP 137 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~--pD~vv~~GDli~~~~~~~~~~~~~~~l~~ 137 (408)
-++++++|+|-... .+.+.++.. . .+..+++||++|.+. ...+.+.-.+.-
T Consensus 51 ~~~~vvGDiHG~~~-----------------------dL~~il~~~g~~~~~~~~lFLGDyVDRG~--~s~Evl~ll~~l 105 (321)
T cd07420 51 KQVTICGDLHGKLD-----------------------DLFLIFYKNGLPSPENPYVFNGDFVDRGK--RSIEILIILFAF 105 (321)
T ss_pred CCeEEEEeCCCCHH-----------------------HHHHHHHHcCCCCccceEEEeccccCCCC--CcHHHHHHHHHH
Confidence 36899999995432 233334332 2 268999999998764 233444333321
Q ss_pred hHhcCCCEEEEcCCCCCCC
Q 015367 138 AMELGLPWAAVLGNHDQES 156 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~ 156 (408)
....+-.++.+.||||...
T Consensus 106 k~~~p~~v~llRGNHE~~~ 124 (321)
T cd07420 106 FLVYPNEVHLNRGNHEDHI 124 (321)
T ss_pred hhcCCCcEEEecCchhhhh
Confidence 1223445899999999853
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0087 Score=53.87 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=42.1
Q ss_pred EEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH----HcCCCEEEEcCCcCCCCCcc----------cHHH
Q 015367 64 ILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE----AEKPDFIAFTGDNIFGSSTT----------DVAE 129 (408)
Q Consensus 64 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~~pD~vv~~GDli~~~~~~----------~~~~ 129 (408)
|+++||+|++.... ..+.+.+.+. +.+|+.+|++|++++..... ....
T Consensus 1 Iv~~Sg~~~~~~~~------------------~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~ 62 (209)
T PF04042_consen 1 IVFASGPFLDSDNL------------------SLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEE 62 (209)
T ss_dssp EEEEES--CTTT-H------------------HHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHH
T ss_pred CEEEecCccCCCHh------------------HHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccH
Confidence 78999999985532 2344555554 56799999999998754321 1111
Q ss_pred ----HHHHHHhhhHhcCCCEEEEcCCCCCCCC
Q 015367 130 ----SMIQAFGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 130 ----~~~~~l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
.+.+.+.. +...+++..|||+||....
T Consensus 63 ~~~~~~~~~~~~-i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 63 DFLKELDSFLES-ILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHHCHHHHCC-CHCCSEEEEE--TTCTT-S
T ss_pred HHHHHHHHHHhh-cccccEEEEeCCCcccccc
Confidence 12222222 2357899999999998654
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.011 Score=57.56 Aligned_cols=72 Identities=19% Similarity=0.199 Sum_probs=41.7
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCC-CEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKP-DFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
-++.+++|+|-... .+..+.+.+.-... +.+|+.||++|.+. ...+.+.-.+.-...
T Consensus 66 ~~i~VvGDIHG~~~--------------------dL~~ll~~~g~~~~~~~ylFLGDyVDRGp--~SlEvl~lL~~lki~ 123 (377)
T cd07418 66 CEVVVVGDVHGQLH--------------------DVLFLLEDAGFPDQNRFYVFNGDYVDRGA--WGLETFLLLLSWKVL 123 (377)
T ss_pred CCEEEEEecCCCHH--------------------HHHHHHHHhCCCCCCceEEEeccccCCCC--ChHHHHHHHHHHhhc
Confidence 46999999995432 12223332221222 45999999997664 333444322221123
Q ss_pred cCCCEEEEcCCCCCC
Q 015367 141 LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~ 155 (408)
.+--++.+.||||..
T Consensus 124 ~p~~v~lLRGNHE~~ 138 (377)
T cd07418 124 LPDRVYLLRGNHESK 138 (377)
T ss_pred cCCeEEEEeeecccc
Confidence 345589999999975
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.01 Score=56.77 Aligned_cols=71 Identities=14% Similarity=0.048 Sum_probs=41.8
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcC
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELG 142 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 142 (408)
++++++|+|-... .+..+.+.......+-.|+.||+++.+.. ..+.+.-.+.-.+..+
T Consensus 60 ~i~vvGDIHG~~~--------------------dL~~l~~~~g~~~~~~ylfLGDyVDRG~~--s~evl~ll~~lki~~p 117 (320)
T PTZ00480 60 PLKICGDVHGQYF--------------------DLLRLFEYGGYPPESNYLFLGDYVDRGKQ--SLETICLLLAYKIKYP 117 (320)
T ss_pred CeEEEeecccCHH--------------------HHHHHHHhcCCCCcceEEEeceecCCCCC--cHHHHHHHHHhcccCC
Confidence 4889999995322 12223333333345678999999987642 2333332222112234
Q ss_pred CCEEEEcCCCCCC
Q 015367 143 LPWAAVLGNHDQE 155 (408)
Q Consensus 143 ~p~~~v~GNHD~~ 155 (408)
-.++.+.||||..
T Consensus 118 ~~v~llRGNHE~~ 130 (320)
T PTZ00480 118 ENFFLLRGNHECA 130 (320)
T ss_pred CceEEEecccchh
Confidence 4689999999984
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.03 Score=51.53 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccc-ccc---CCc--ccccccccccCCCCh-HHHHHHHhcCC
Q 015367 247 LRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQ-LYY---QNI--VGQFQEAVACSRVNS-GVLQTLVSLGD 319 (408)
Q Consensus 247 l~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~-~~~---~~~--~g~~~e~~~~~~~~~-~~l~~l~~~~~ 319 (408)
+-||+..|.... ..++|+++|.|+--..+.. .|. ..+ .|. .+..-.|.... .++..+ +-+|
T Consensus 255 lpwlk~dl~~~a----------adgrpv~LfqhyGwdtfsteawdpAsrT~Dd~Gs-gaphww~a~er~all~~l-qGYN 322 (392)
T COG5555 255 LPWLKVDLIYSA----------ADGRPVYLFQHYGWDTFSTEAWDPASRTLDDTGS-GAPHWWPAPERGALLFFL-QGYN 322 (392)
T ss_pred Ccceeccceeec----------cCCCceeehhhhCccceeccccCchhcccccCCC-CCCCCCCCCCcchHHHhh-cCce
Confidence 459998877654 3689999999994322211 121 111 111 11122233333 344444 4468
Q ss_pred eEEEEeccCCCCC
Q 015367 320 IKAVFVGHDHTND 332 (408)
Q Consensus 320 V~~v~~GH~H~n~ 332 (408)
|...|+||.|...
T Consensus 323 vvg~fhGhkhd~~ 335 (392)
T COG5555 323 VVGTFHGHKHDFN 335 (392)
T ss_pred eEEeccccccccc
Confidence 9999999999853
|
|
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.42 Score=43.37 Aligned_cols=53 Identities=19% Similarity=0.338 Sum_probs=35.5
Q ss_pred HHcCCCEEEEcCCcCCCCCc------------------ccHHHHHHHH---------HhhhHhcCCCEEEEcCCCCCCCC
Q 015367 105 EAEKPDFIAFTGDNIFGSST------------------TDVAESMIQA---------FGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 105 ~~~~pD~vv~~GDli~~~~~------------------~~~~~~~~~~---------l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
.+.+||++|++||.|+.+.. ....+.+.+. ++. +.+.+|++.++-+||+..+
T Consensus 26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~-~~~~~p~~~iwDDHDi~~n 104 (228)
T cd07389 26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQR-LLAQVPTIGIWDDHDIGDN 104 (228)
T ss_pred cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHH-HhhcCCEEEeccccccccc
Confidence 47899999999999988742 1111111111 222 2457899999999999866
Q ss_pred C
Q 015367 158 M 158 (408)
Q Consensus 158 ~ 158 (408)
.
T Consensus 105 ~ 105 (228)
T cd07389 105 W 105 (228)
T ss_pred c
Confidence 4
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.01 Score=56.33 Aligned_cols=70 Identities=14% Similarity=0.049 Sum_probs=40.7
Q ss_pred EEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCC
Q 015367 64 ILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGL 143 (408)
Q Consensus 64 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~ 143 (408)
+.+++|+|-... .+..+.+.+.....+-+++.||+++.+.. ..+.+...+.-.+..+.
T Consensus 54 ~~ViGDIHG~~~--------------------~L~~l~~~~~~~~~~~~lfLGDyVDRG~~--s~evl~ll~~lk~~~p~ 111 (294)
T PTZ00244 54 VRVCGDTHGQYY--------------------DLLRIFEKCGFPPYSNYLFLGDYVDRGKH--SVETITLQFCYKIVYPE 111 (294)
T ss_pred ceeeccCCCCHH--------------------HHHHHHHHcCCCCcccEEEeeeEecCCCC--HHHHHHHHHHHhhccCC
Confidence 778999995432 12223333322344578899999987642 33333322211122355
Q ss_pred CEEEEcCCCCCC
Q 015367 144 PWAAVLGNHDQE 155 (408)
Q Consensus 144 p~~~v~GNHD~~ 155 (408)
.++.+.||||..
T Consensus 112 ~v~llrGNHE~~ 123 (294)
T PTZ00244 112 NFFLLRGNHECA 123 (294)
T ss_pred eEEEEecccchH
Confidence 699999999974
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.025 Score=54.20 Aligned_cols=72 Identities=18% Similarity=0.123 Sum_probs=42.1
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc-CCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE-KPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
-++.+++|+|-... .+.++.+.+.-. .-|-++++||++|.+. ...+.+...+.-.+.
T Consensus 60 ~~~~VvGDIHG~~~--------------------dL~~ll~~~g~~~~~~~ylFLGDyVDRG~--~S~Evl~ll~~lki~ 117 (316)
T cd07417 60 EKITVCGDTHGQFY--------------------DLLNIFELNGLPSETNPYLFNGDFVDRGS--FSVEVILTLFAFKLL 117 (316)
T ss_pred ceeEEeecccCCHH--------------------HHHHHHHhcCCCCccCeEEEEeeEecCCC--ChHHHHHHHHHhhhc
Confidence 47999999995432 122233322211 2257999999998764 334444433321123
Q ss_pred cCCCEEEEcCCCCCC
Q 015367 141 LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~ 155 (408)
.+--++.+.||||..
T Consensus 118 ~p~~v~lLRGNHE~~ 132 (316)
T cd07417 118 YPNHFHLNRGNHETD 132 (316)
T ss_pred cCCceEEEeeccchH
Confidence 345588999999973
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.024 Score=48.17 Aligned_cols=44 Identities=16% Similarity=0.086 Sum_probs=32.7
Q ss_pred cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCC
Q 015367 107 EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHD 153 (408)
Q Consensus 107 ~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD 153 (408)
.+.|++++.||+...... ...+.+.+....+.++|+|++-|||+
T Consensus 25 gpFd~~ic~Gdff~~~~~---~~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 25 GPFDALLCVGDFFGDDED---DEELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CCeeEEEEecCccCCccc---hhhHHHHhcCCccCCCCEEEECCCCC
Confidence 578999999997644332 24555555555678999999999997
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.02 Score=54.57 Aligned_cols=71 Identities=15% Similarity=0.068 Sum_probs=41.5
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcC
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELG 142 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~ 142 (408)
.+.+++|+|-... .+..+.+.+.....+-+++.||+++.+. ...+.+...+.-....+
T Consensus 44 ~i~vvGDIHG~~~--------------------~L~~l~~~~~~~~~~~~lfLGDyVDRG~--~s~evl~ll~~lk~~~p 101 (303)
T PTZ00239 44 PVNVCGDIHGQFY--------------------DLQALFKEGGDIPNANYIFIGDFVDRGY--NSVETMEYLLCLKVKYP 101 (303)
T ss_pred CEEEEEeCCCCHH--------------------HHHHHHHhcCCCCCceEEEeeeEcCCCC--CHHHHHHHHHHhhhcCC
Confidence 3888999995432 1222333222234578999999998764 23333333222112224
Q ss_pred CCEEEEcCCCCCC
Q 015367 143 LPWAAVLGNHDQE 155 (408)
Q Consensus 143 ~p~~~v~GNHD~~ 155 (408)
--++.+.||||..
T Consensus 102 ~~v~llrGNHE~~ 114 (303)
T PTZ00239 102 GNITLLRGNHESR 114 (303)
T ss_pred CcEEEEecccchH
Confidence 4589999999974
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.44 Score=43.73 Aligned_cols=73 Identities=11% Similarity=0.052 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCC-ChHHHHHHHhcCCeEEEE
Q 015367 246 QLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRV-NSGVLQTLVSLGDIKAVF 324 (408)
Q Consensus 246 Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~-~~~~l~~l~~~~~V~~v~ 324 (408)
..+-+++.++++++ ....+|+.+|-..... .. |.. ...+-..+.+. ++++|+
T Consensus 160 ~~~~~~~~i~~lr~----------~~D~vIv~~H~G~e~~------~~----------p~~~~~~la~~l~~~-G~D~Ii 212 (239)
T cd07381 160 DLERIAADIAEAKK----------KADIVIVSLHWGVEYS------YY----------PTPEQRELARALIDA-GADLVI 212 (239)
T ss_pred CHHHHHHHHHHHhh----------cCCEEEEEecCcccCC------CC----------CCHHHHHHHHHHHHC-CCCEEE
Confidence 34556666666652 3566888888533210 00 011 12344455554 499999
Q ss_pred eccCCCCCcccCCCCeEEEEe
Q 015367 325 VGHDHTNDFCGNLNGIWFCYG 345 (408)
Q Consensus 325 ~GH~H~n~~~~~~~gi~~~~~ 345 (408)
.||.|...-+..++|..++|+
T Consensus 213 G~H~Hv~q~~E~~~~~~I~YS 233 (239)
T cd07381 213 GHHPHVLQGIEIYKGKLIFYS 233 (239)
T ss_pred cCCCCcCCCeEEECCEEEEEc
Confidence 999998654445677777765
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.12 Score=52.50 Aligned_cols=61 Identities=20% Similarity=0.224 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcCCeEE-E
Q 015367 245 SQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKA-V 323 (408)
Q Consensus 245 ~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~-v 323 (408)
.|.+|-.+.++.. ...-++++.|.|.... ..| .....+....++++.. |
T Consensus 212 ~~~~~~~~m~~~~------------~idlii~lgH~~~~~~-~e~-----------------~~~~~~ir~~~p~t~Iqv 261 (602)
T KOG4419|consen 212 TQSEWEQDMVNTT------------DIDLIIALGHSPVRDD-DEW-----------------KSLHAEIRKVHPNTPIQV 261 (602)
T ss_pred hccchHHHHhhcc------------CccEEEEecccccccc-hhh-----------------hhHHHHHhhhCCCCceEE
Confidence 3566776765442 4667888888887531 111 0123334445678888 9
Q ss_pred EeccCCCCCccc
Q 015367 324 FVGHDHTNDFCG 335 (408)
Q Consensus 324 ~~GH~H~n~~~~ 335 (408)
|-||.|.+++..
T Consensus 262 iGGHshird~a~ 273 (602)
T KOG4419|consen 262 IGGHSHIRDFAV 273 (602)
T ss_pred ECchhhhhhhhh
Confidence 999999988765
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.068 Score=51.26 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=26.8
Q ss_pred EEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 111 FIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 111 ~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
-+|+.||++|.+. ...+.+.-.+.-....+.-++.+.||||..
T Consensus 85 ~~vfLGDyVDRGp--~s~evl~ll~~lk~~~p~~v~lLRGNHE~~ 127 (311)
T cd07419 85 DYLFLGDYVDRGS--NSLETICLLLALKVKYPNQIHLIRGNHEDR 127 (311)
T ss_pred eEEEECCccCCCC--ChHHHHHHHHHhhhcCCCcEEEeccccchH
Confidence 4789999997764 333433332221122355689999999974
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.26 E-value=1 Score=41.00 Aligned_cols=80 Identities=25% Similarity=0.382 Sum_probs=48.6
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHH-HHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTT-RFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
|||++|.|+=-.... +.+ +.+-....+.++|||+..|-...++..- ..+.+. .+++
T Consensus 1 mriLfiGDvvGk~Gr------------------~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Gi-t~k~y~----~l~~ 57 (266)
T COG1692 1 MRILFIGDVVGKPGR------------------KAVKEHLPQLKSKYKIDFVIVNGENAAGGFGI-TEKIYK----ELLE 57 (266)
T ss_pred CeEEEEecccCcchH------------------HHHHHHhHHHHHhhcCcEEEEcCccccCCcCC-CHHHHH----HHHH
Confidence 689999998543322 222 3344455568999999999976655421 122232 2356
Q ss_pred cCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 141 LGLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
+++.++ +.|||-.. +.++.++...
T Consensus 58 ~G~dvi-T~GNH~wd----~~ei~~~i~~ 81 (266)
T COG1692 58 AGADVI-TLGNHTWD----QKEILDFIDN 81 (266)
T ss_pred hCCCEE-eccccccc----chHHHHHhhc
Confidence 688765 78999653 3445555443
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.59 Score=42.98 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEe
Q 015367 309 GVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYG 345 (408)
Q Consensus 309 ~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~ 345 (408)
++-..+.+. +|++|+.||.|...-+..++|..++|+
T Consensus 196 ~~A~~l~~~-G~DvIiG~H~H~~~~~e~~~~~~I~Ys 231 (239)
T smart00854 196 ELAHALIDA-GADVVIGHHPHVLQPIEIYKGKLIAYS 231 (239)
T ss_pred HHHHHHHHc-CCCEEEcCCCCcCCceEEECCEEEEEc
Confidence 455556555 499999999998655455677777665
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.26 Score=41.04 Aligned_cols=77 Identities=19% Similarity=0.242 Sum_probs=47.9
Q ss_pred HHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCC---CCCCCceEEEEEecCCCCCCccccceeEEE
Q 015367 309 GVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGK---AGWPRRARIILAEAGKGENGWMEVEMIKTW 385 (408)
Q Consensus 309 ~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~---~~~~~g~rv~~i~~~~~~~~~~~~~~~~tw 385 (408)
+-+..|.+.=+|+..+.||+|..+. ...+|-.+ ..|+|.-+++.. +...+.+-+++|.. ..+.+|
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~A-ye~eg~ff-vnPGSaTGAfn~~~t~~~~PSFvLmDiqg----------~~~v~Y 164 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEA-YEHEGKFF-VNPGSATGAFNVSDTDIIVPSFVLMDIQG----------STVVTY 164 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEE-EEeCCcEE-eCCCcccCCCcccccCCCCCceEEEEecC----------CEEEEE
Confidence 4555565555799999999998543 33445333 445444444432 23567888888874 346777
Q ss_pred -EEccCCCCCcccc
Q 015367 386 -KRLDDQRLSKIDE 398 (408)
Q Consensus 386 -~r~~~~~~~~~~~ 398 (408)
.|+-+|. +..|+
T Consensus 165 vY~lidge-VkVdk 177 (183)
T KOG3325|consen 165 VYRLIDGE-VKVDK 177 (183)
T ss_pred EeeeeCCc-EEEEE
Confidence 7788877 45554
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=93.79 E-value=2.4 Score=38.95 Aligned_cols=159 Identities=21% Similarity=0.247 Sum_probs=74.2
Q ss_pred HHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccC-
Q 015367 100 LKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVN- 178 (408)
Q Consensus 100 ~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~- 178 (408)
+-+..++.++||||..|....++.... ..... .+.+.++.++ +.|||=+.. .++.+++...+.-+.-.+
T Consensus 19 Lp~L~~~~~~DfVIaNgENaa~G~Git-~~~~~----~L~~~GvDvi-T~GNH~wdk----kei~~~i~~~~~ilRPaN~ 88 (253)
T PF13277_consen 19 LPELKEEYGIDFVIANGENAAGGFGIT-PKIAE----ELFKAGVDVI-TMGNHIWDK----KEIFDFIDKEPRILRPANY 88 (253)
T ss_dssp HHHHGG--G-SEEEEE-TTTTTTSS---HHHHH----HHHHHT-SEE-E--TTTTSS----TTHHHHHHH-SSEE--TTS
T ss_pred HHHHHhhcCCCEEEECCcccCCCCCCC-HHHHH----HHHhcCCCEE-ecCcccccC----cHHHHHHhcCCCcEECCCC
Confidence 334445679999999999876554311 12222 2345688866 789997643 345556555443222111
Q ss_pred CCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHh
Q 015367 179 PPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQ 258 (408)
Q Consensus 179 p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~ 258 (408)
|+ ...|.|+..+...+ ..+-++|--.....+ .+. .-...+++.|++++
T Consensus 89 p~--------------~~pG~G~~i~~~~g-----------~kv~ViNl~Gr~fm~------~~~-~PF~~~d~~l~~l~ 136 (253)
T PF13277_consen 89 PP--------------GTPGRGYRIFEKNG-----------KKVAVINLMGRVFMP------PID-CPFRAADRLLEELK 136 (253)
T ss_dssp -T--------------T-SSBSEEEEEETT-----------EEEEEEEEE--TTS---------S--HHHHHHHHHHH--
T ss_pred CC--------------CCCcCcEEEEEECC-----------EEEEEEECcccccCC------CCC-ChHHHHHHHHHhcc
Confidence 22 35677777776643 234444432111111 122 33566777777764
Q ss_pred hhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCc
Q 015367 259 GQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDF 333 (408)
Q Consensus 259 ~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~ 333 (408)
.....++|=+|---.+ | ..-+-...+ +.|.+|+-=|+|....
T Consensus 137 ----------~~~~~iiVDFHAEaTS--------------E--------K~A~g~~lD-GrvsaV~GTHTHVqTa 178 (253)
T PF13277_consen 137 ----------EETDIIIVDFHAEATS--------------E--------KQAMGWYLD-GRVSAVVGTHTHVQTA 178 (253)
T ss_dssp -------------SEEEEEEE-S-HH--------------H--------HHHHHHHHB-TTBSEEEEESSSS-BS
T ss_pred ----------ccCCEEEEEeecCcHH--------------H--------HHHHHHHhC-CcEEEEEeCCCCccCc
Confidence 2456778888831110 0 012222333 5699999999998543
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=90.88 E-value=11 Score=34.67 Aligned_cols=76 Identities=12% Similarity=0.091 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcCCeEEE
Q 015367 244 ESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAV 323 (408)
Q Consensus 244 ~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v 323 (408)
..+++.+.+.+++++ .....+||++|--.. + ..... ....++-..+.+.+ +++|
T Consensus 167 ~~~~~~i~~~i~~~r----------~~~D~vIv~~HwG~e-~-----~~~p~---------~~q~~~a~~lidaG-aDiI 220 (250)
T PF09587_consen 167 RPGIERIKEDIREAR----------KKADVVIVSLHWGIE-Y-----ENYPT---------PEQRELARALIDAG-ADII 220 (250)
T ss_pred cchHHHHHHHHHHHh----------cCCCEEEEEeccCCC-C-----CCCCC---------HHHHHHHHHHHHcC-CCEE
Confidence 445678888888876 246778999996321 0 00000 11235666777775 9999
Q ss_pred EeccCCCCCcccCCCCeEEEEe
Q 015367 324 FVGHDHTNDFCGNLNGIWFCYG 345 (408)
Q Consensus 324 ~~GH~H~n~~~~~~~gi~~~~~ 345 (408)
+.+|-|.-.-...++|-.++|+
T Consensus 221 iG~HpHv~q~~E~y~~~~I~YS 242 (250)
T PF09587_consen 221 IGHHPHVIQPVEIYKGKPIFYS 242 (250)
T ss_pred EeCCCCcccceEEECCEEEEEe
Confidence 9999998655555677777665
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=88.28 E-value=0.76 Score=43.97 Aligned_cols=49 Identities=16% Similarity=0.133 Sum_probs=31.1
Q ss_pred cCCCEEEEcCCcCCCCCc--------ccHHHHHHHH---HhhhHhcCCCEEEEcCCCCCC
Q 015367 107 EKPDFIAFTGDNIFGSST--------TDVAESMIQA---FGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 107 ~~pD~vv~~GDli~~~~~--------~~~~~~~~~~---l~~~~~~~~p~~~v~GNHD~~ 155 (408)
.+.|+++++||+-.-... +..+..+... .+.-..+++|.++|-|||+..
T Consensus 29 tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHEAs 88 (456)
T KOG2863|consen 29 TKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHEAS 88 (456)
T ss_pred CCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchHHH
Confidence 388999999995322221 1223333333 333356789999999999863
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=83.95 E-value=1.8 Score=37.90 Aligned_cols=31 Identities=23% Similarity=0.386 Sum_probs=24.2
Q ss_pred CeEEEEeccCCCCCcccCCCCeEEEEeCCcCC
Q 015367 319 DIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGY 350 (408)
Q Consensus 319 ~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~ 350 (408)
+++++++||+|. .+....+|..++..|+.|.
T Consensus 118 ~~d~vi~GHtH~-p~~~~~~~~~~iNpGs~~~ 148 (182)
T PRK09453 118 DGDVLVYGHTHI-PVAEKQGGIILFNPGSVSL 148 (182)
T ss_pred CCCEEEECCCCC-CcceEECCEEEEECCCccc
Confidence 478999999998 4556678888887776664
|
|
| >KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=83.59 E-value=3.6 Score=40.55 Aligned_cols=79 Identities=15% Similarity=0.163 Sum_probs=50.1
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHH---HHcCCCEEEEcCCcCCCCCcccHHHHHHHHHh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRII---EAEKPDFIAFTGDNIFGSSTTDVAESMIQAFG 136 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~ 136 (408)
..-+||++||+|+.... .++.+.+.+ +...|-+||+.|-.............+.+.+.
T Consensus 281 ~d~~fVfLSdV~LD~~~-------------------vm~aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~s~~~~k~~f~ 341 (525)
T KOG3818|consen 281 TDTSFVFLSDVFLDDKK-------------------VMEALRKIFQGYKDAPPTAIILCGSFTSSPRQTSSSDQLKDGFR 341 (525)
T ss_pred cCceEEEEehhccccHH-------------------HHHHHHHHHhhccCCCCeEEEEeccccccccccchHHHHHHHHH
Confidence 35789999999997553 334444444 44678899999997644332233344444444
Q ss_pred hhHh---------cCCCEEEEcCCCCCCCC
Q 015367 137 PAME---------LGLPWAAVLGNHDQEST 157 (408)
Q Consensus 137 ~~~~---------~~~p~~~v~GNHD~~~~ 157 (408)
.+.. .+.-+++|||=.|-+..
T Consensus 342 ~LA~~l~~~~~~~ekT~fIFVPGP~Dp~~~ 371 (525)
T KOG3818|consen 342 WLAAQLTCFRKDYEKTQFIFVPGPNDPWVD 371 (525)
T ss_pred HHHhhccccccccccceEEEecCCCCCCcC
Confidence 3211 24568999999998764
|
|
| >COG2949 SanA Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.62 E-value=11 Score=33.43 Aligned_cols=44 Identities=18% Similarity=0.287 Sum_probs=26.4
Q ss_pred HHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCE
Q 015367 97 TRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPW 145 (408)
Q Consensus 97 ~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~ 145 (408)
.+...++.++.+.+.++++||.-.. +.++...+.+ .+.+.++|-
T Consensus 82 i~aA~~ly~~gKV~~LLlSGDN~~~--sYnEp~tM~k---dL~~~GVp~ 125 (235)
T COG2949 82 IDAAIALYKAGKVNYLLLSGDNATV--SYNEPRTMRK---DLIAAGVPA 125 (235)
T ss_pred HHHHHHHHhcCCeeEEEEecCCCcc--cccchHHHHH---HHHHcCCCH
Confidence 3445555667899999999995432 2222333333 345668874
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=82.35 E-value=1.7 Score=41.87 Aligned_cols=72 Identities=22% Similarity=0.255 Sum_probs=41.3
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
-|.++.|+|-.... .+ ++....-...|+ -.|++||++|.+.. ..+.+.-.++--...
T Consensus 60 PV~i~GDiHGq~~D-------------------Ll-rlf~~~g~~pp~~~ylFLGDYVDRG~~--slE~i~LL~a~Ki~y 117 (331)
T KOG0374|consen 60 PVKIVGDIHGQFGD-------------------LL-RLFDLLGSFPPDQNYVFLGDYVDRGKQ--SLETICLLFALKIKY 117 (331)
T ss_pred CEEEEccCcCCHHH-------------------HH-HHHHhcCCCCCcccEEEecccccCCcc--ceEEeehhhhhhhhC
Confidence 48889999965331 11 222322212254 48999999987753 222222112111234
Q ss_pred CCCEEEEcCCCCCCC
Q 015367 142 GLPWAAVLGNHDQES 156 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~ 156 (408)
+--++...|||+...
T Consensus 118 p~~~~lLRGNHE~~~ 132 (331)
T KOG0374|consen 118 PENVFLLRGNHECAS 132 (331)
T ss_pred CceEEEecccccccc
Confidence 566999999999864
|
|
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.44 E-value=1.6 Score=40.39 Aligned_cols=69 Identities=14% Similarity=0.158 Sum_probs=42.4
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
+..|++.|||+|--... +. +-..-|+.+++||... -+..++...+.+.+..+
T Consensus 60 ~~~r~VcisdtH~~~~~-----------------------i~---~~p~gDvlihagdfT~-~g~~~ev~~fn~~~gsl- 111 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD-----------------------IN---DIPDGDVLIHAGDFTN-LGLPEEVIKFNEWLGSL- 111 (305)
T ss_pred CceEEEEecCcccccCc-----------------------cc---cCCCCceEEeccCCcc-ccCHHHHHhhhHHhccC-
Confidence 46899999999954332 11 2345699999999653 33334445555544332
Q ss_pred hcCCCEEEEcCCCCCCCC
Q 015367 140 ELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~ 157 (408)
-... -++|.|||+..-.
T Consensus 112 ph~y-KIVIaGNHELtFd 128 (305)
T KOG3947|consen 112 PHEY-KIVIAGNHELTFD 128 (305)
T ss_pred ccee-eEEEeeccceeec
Confidence 1111 3679999998644
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 408 | |||
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 3e-18 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 1e-16 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 5e-11 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 2e-10 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-07 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 1e-04 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 4e-04 |
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 85.2 bits (210), Expect = 3e-18
Identities = 47/285 (16%), Positives = 85/285 (29%), Gaps = 44/285 (15%)
Query: 59 DGTFKILQVADMHYGMGKVT-------RCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDF 111
D ++ D+HY +T + + SD T FL +E++K D
Sbjct: 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFL-ADVESKKTDV 95
Query: 112 IAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMD 171
+ +GD T E + + + G V GNHD + R+ F
Sbjct: 96 LIISGDLTNNGEKTS-HEELAKKLTQVEKNGTQVFVVPGNHDINNPWARK----FEKDKQ 150
Query: 172 YSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDS---G 228
++P D S + E + L P S + L LD+
Sbjct: 151 LPTDTISP--TDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVW------LLMLDTAIYK 202
Query: 229 DRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQL 288
T G + L W+ S + + K+ + H + + +
Sbjct: 203 TNMQQGNPTTEGGLTAGTLDWIKESSA----LAKKNGAKL------IPVLHHNLTDHNDV 252
Query: 289 YYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDF 333
+ + + ++ G + GH HT +
Sbjct: 253 IQKGYT----------INYNQQVIDALTEGAMDFSLSGHIHTQNI 287
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 79.2 bits (194), Expect = 1e-16
Identities = 54/305 (17%), Positives = 83/305 (27%), Gaps = 46/305 (15%)
Query: 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDN 118
D F +AD+ Y + T + Y + R E+ + GD
Sbjct: 3 DPVFTFGLIADVQYADIEDGENYLRTRRRY-YRGSADLLRDAVLQWRRERVQCVVQLGDI 61
Query: 119 IFGSSTTDVA--ESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQ 176
I G + A ++ + V GNH+ + L ++ +
Sbjct: 62 IDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTD 121
Query: 177 VNPPAEDPSN------LAKGGVMEKIDGFGNYDLRVYGPPGSH--------LANSSILNL 222
A +D YDL V G + NL
Sbjct: 122 TGSDLIGDDIYAYEFSPAPNFRFVLLDA---YDLSVIGREEESEKHTHSWRILTQHNHNL 178
Query: 223 FFLDSGDRET---VRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFH 279
L+ R V+ G E QL+WL V +++ L F H
Sbjct: 179 QDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQE----------RVLIFSH 228
Query: 280 IPIPETPQLYYQNIVGQFQEAVACSRVNSG-VLQTLVSLGDIKAVFVGHDHTNDFCGNLN 338
+P+ C N VL L S + GHDH C + +
Sbjct: 229 LPVHP------------CAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS 276
Query: 339 GIWFC 343
G
Sbjct: 277 GAQHI 281
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 5e-11
Identities = 50/298 (16%), Positives = 89/298 (29%), Gaps = 89/298 (29%)
Query: 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-----EKPDFIAFT 115
+ +L ++D H + + + ++ L ++E +PD I FT
Sbjct: 25 DYVLLHISDTH-----------LIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFT 73
Query: 116 GDNI--FGSSTT-DVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDY 172
GD + G +++ F +LG V+GNHD + + + L S
Sbjct: 74 GD-LADKGEPAAYRKLRGLVEPFAA--QLGAELVWVMGNHDDRAELRKFLLDEAPS---- 126
Query: 173 SVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRET 232
+ + G L + LD+ +
Sbjct: 127 ------------------------MAPLDRVCMIDG-----------LRIIVLDT----S 147
Query: 233 VRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQN 292
V G +G I+ SQL WL E L D + H P +
Sbjct: 148 VPG-HHHGEIRASQLGWLA---EELATPAPD---------GTILALHHPPIPSVLDMAVT 194
Query: 293 IVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGY 350
+ + + L ++ D++A+ GH H + GI Y
Sbjct: 195 VELR----------DQAALGRVLRGTDVRAILAGHLHYS-TNATFVGIPVSVASATCY 241
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 2e-10
Identities = 37/288 (12%), Positives = 72/288 (25%), Gaps = 86/288 (29%)
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-----EKPDFIAFTGD 117
+ ++D H + K ++ ++ E+PD + +GD
Sbjct: 2 LLAHISDTH-----------FRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGD 50
Query: 118 NI-FGSSTT-DVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVA 175
+ G VA ++ L P + GNHD ++ L
Sbjct: 51 IVNCGRPEEYQVARQILG------SLNYPLYLIPGNHDDKALFLEYLQPLCPQLGS---- 100
Query: 176 QVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRG 235
+ + L F+DS + G
Sbjct: 101 --------------------DANNMRCAVDDFA-----------TRLLFIDS----SRAG 125
Query: 236 VRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVG 295
+ G++ + + WL ++ G P F H P I
Sbjct: 126 -TSKGWLTDETISWL------------EAQLFEGGDKPATIFMHHPPLPLGNAQMDPIAC 172
Query: 296 QFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFC 343
+ +L + + +F GH+H+
Sbjct: 173 ENGHR---------LLALVERFPSLTRIFCGHNHSL-TMTQYRQALIS 210
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 54.7 bits (131), Expect = 2e-08
Identities = 52/346 (15%), Positives = 93/346 (26%), Gaps = 86/346 (24%)
Query: 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDN 118
+ + V D F ++ + + ++ DFI GDN
Sbjct: 4 TPILRFVAVGDWGGV----------PNAPFHTAREMANAKAIATTVKTLGADFILSLGDN 53
Query: 119 IFGSSTTDV-----AESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYS 173
+ + D E+ F +PW + GNHD +
Sbjct: 54 FYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVS-------------- 99
Query: 174 VAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSG----- 228
AQ+ N+ Y ++ + +F LD+
Sbjct: 100 -AQIAYSKISK--------------RWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGN 144
Query: 229 --DRETVRGVRTYG-YIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPET 285
D + + R + +QL W+ + L K+D L H
Sbjct: 145 SDDFVSQQPERPRNLALARTQLAWI---KKQLAAAKEDYV---------LVAGH------ 186
Query: 286 PQLYYQNIVGQFQEAVACSRVNSGVLQTLVSL---GDIKAVFVGHDHTNDFCGNLNGIWF 342
++A +++ L+ L + A GHDH + + NG+ F
Sbjct: 187 ----------YPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGF 236
Query: 343 ---CYGGGIGYHGYGKAGWPRRARIILAEAGKGENGWMEVEMIKTW 385
G + P A G+ VE+
Sbjct: 237 VLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKE 282
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 7e-07
Identities = 55/400 (13%), Positives = 112/400 (28%), Gaps = 110/400 (27%)
Query: 66 QVADMHYGMGKVTRCRDVTAT---------EFKYCSDLNTTRFLKRIIEAEKPDFIAFTG 116
+ + Y +D+ + + K D K I+ E+ D I +
Sbjct: 10 ETGEHQYQ------YKDILSVFEDAFVDNFDCKDVQD-----MPKSILSKEEIDHIIMSK 58
Query: 117 DNIFGS-----STTDVAESMIQAF-GPAMELGLPW-AAVLGNHDQESTMDREELMYFISL 169
D + G+ + E M+Q F + + + + + ++ +M +I
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM---YIE- 114
Query: 170 MDYSVAQVNPPAEDPSNLAKGGV--MEKIDGFGN--YDLR------VYGPPG---SHLAN 216
Q + D AK V ++ +LR + G G + +A
Sbjct: 115 ------QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168
Query: 217 SSILN----------LFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNR 266
L+ +F+L+ + + V ++ Q SN
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETV-----LEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 267 K-----VGAQLPGLAFFHIPIPETPQL------YYQNIVGQFQEAVACSRVNSGVLQTLV 315
K + A+L L P L F ++C + L+
Sbjct: 224 KLRIHSIQAELRRL-LKSKPYENC--LLVLLNVQNAKAWNAF--NLSC--------KILL 270
Query: 316 SLGDIKAV-FVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGK---AGW--------PRRAR 363
+ + F+ T + + + K + PR
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTL-------TPDEVKSLLLKYLDCRPQDLPREVL 323
Query: 364 II--LAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVL 401
+ E+ + WK ++ +L+ I E L
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 1e-04
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 7/26 (26%)
Query: 30 DKQILQKLQISHDKIHLKKY-PD-LP 53
+KQ L+KLQ S LK Y D P
Sbjct: 18 EKQALKKLQAS-----LKLYADDSAP 38
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 4e-04
Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 24/102 (23%)
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGS 122
IL ++ DL ++ D IA G+ + +
Sbjct: 7 YILATSNPM--------------------GDLEALEKFVKLAPDTGADAIALIGNLMPKA 46
Query: 123 STTDVAESMIQAFGPAMELGLPWAAVLGNHD-QESTMDREEL 163
+ + + + E LP A V G D RE
Sbjct: 47 AKSRDYAAFFRILS---EAHLPTAYVPGPQDAPIWEYLREAA 85
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 408 | |||
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.94 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.93 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.93 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.92 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.91 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.9 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.89 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.88 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.72 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.71 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.7 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.69 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.61 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.61 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.54 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.54 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.52 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.51 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.5 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.48 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.47 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.47 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.44 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.43 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.37 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.36 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.3 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.96 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.94 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.88 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.82 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.77 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.76 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.73 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.56 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.55 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.49 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.41 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.17 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 98.1 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 98.07 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.05 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.86 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.6 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.57 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.53 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 97.49 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 97.36 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.32 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 97.31 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 97.28 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 97.23 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 97.16 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 97.13 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.95 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 96.91 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 94.73 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 87.17 |
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-25 Score=211.69 Aligned_cols=233 Identities=19% Similarity=0.182 Sum_probs=152.0
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH--cCCCEEEEcCCcCCCCCcccHHHHHHHHHhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA--EKPDFIAFTGDNIFGSSTTDVAESMIQAFGP 137 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~ 137 (408)
.+|||+++||+|++........ .......++.+.+.+++ .+||+||++||+++... .+.+..+.+.++.
T Consensus 24 ~~~ri~~iSD~H~~~~~~~~~~--------~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~ 94 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRRLYG--------AVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-PAAYRKLRGLVEP 94 (330)
T ss_dssp CSEEEEEECCCCBCSSSCCBTT--------TBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-HHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCccCCCCccccc--------ccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHH
Confidence 4799999999999865432110 01123445667777776 79999999999886654 4456666777766
Q ss_pred hH-hcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCC
Q 015367 138 AM-ELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLAN 216 (408)
Q Consensus 138 ~~-~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~ 216 (408)
+. ..++|+++|+||||+. ..+.+.+. .. . ...+..+|.+.+.
T Consensus 95 l~~~~~~pv~~v~GNHD~~-----~~~~~~~~---~~------~--------------~~~~~~~~~~~~~--------- 137 (330)
T 3ib7_A 95 FAAQLGAELVWVMGNHDDR-----AELRKFLL---DE------A--------------PSMAPLDRVCMID--------- 137 (330)
T ss_dssp HHHHHTCEEEECCCTTSCH-----HHHHHHHH---CC------C--------------CCCSCCCEEEEET---------
T ss_pred HHhhcCCCEEEeCCCCCCH-----HHHHHHhc---cc------c--------------cccCCcceEEEeC---------
Confidence 53 3489999999999973 11222111 10 0 1112335666554
Q ss_pred cceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccc
Q 015367 217 SSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQ 296 (408)
Q Consensus 217 ~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~ 296 (408)
.+++++||+..+. ...|.+.++|++||++.|++. .....|+++|||+......+....
T Consensus 138 --~~~~i~lds~~~~-----~~~~~~~~~q~~wl~~~l~~~------------~~~~~iv~~Hh~p~~~~~~~~~~~--- 195 (330)
T 3ib7_A 138 --GLRIIVLDTSVPG-----HHHGEIRASQLGWLAEELATP------------APDGTILALHHPPIPSVLDMAVTV--- 195 (330)
T ss_dssp --TEEEEECCCCCTT-----CCSBCCCHHHHHHHHHHTTSC------------CTTCEEEECSSCSSCCSSGGGGGG---
T ss_pred --CEEEEEecCCCCC-----CCCCccCHHHHHHHHHHHHhc------------ccCCeEEEEECCCCCCCccccccc---
Confidence 3789999996532 145779999999999987654 344589999999875432221111
Q ss_pred cccccccCCCCh-HHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCC--------CCCCCCceEEEEE
Q 015367 297 FQEAVACSRVNS-GVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYG--------KAGWPRRARIILA 367 (408)
Q Consensus 297 ~~e~~~~~~~~~-~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~--------~~~~~~g~rv~~i 367 (408)
...+. .+.+.+.+ .+|+++||||+|.. .....+|+.++..+++++.... ..+.++|++++++
T Consensus 196 -------~~~~~~~l~~~l~~-~~v~~v~~GH~H~~-~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i 266 (330)
T 3ib7_A 196 -------ELRDQAALGRVLRG-TDVRAILAGHLHYS-TNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHV 266 (330)
T ss_dssp -------SBSCHHHHHHHHTT-SSEEEEEECSSSSC-EEEEETTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEE
T ss_pred -------cccCHHHHHHHHhc-cCceEEEECCCCCc-ccceECCEEEEecCcceeccCCCCCCcceeccCCCCceEEEEE
Confidence 12344 45555544 47999999999995 4567789999999988853111 0133568999999
Q ss_pred ec
Q 015367 368 EA 369 (408)
Q Consensus 368 ~~ 369 (408)
+.
T Consensus 267 ~~ 268 (330)
T 3ib7_A 267 YP 268 (330)
T ss_dssp CS
T ss_pred EC
Confidence 84
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-25 Score=209.09 Aligned_cols=271 Identities=19% Similarity=0.179 Sum_probs=155.3
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcc--cHHHHHHHHHhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTT--DVAESMIQAFGP 137 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l~~ 137 (408)
..|||++|||+|++...........+.++. ......++.+.+.+++.+||+||++||+++..... ...+.+...++.
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYY-RGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECT-THHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHH-HHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 479999999999987532110000000000 00113345555666678999999999998754311 012333333333
Q ss_pred hHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCc
Q 015367 138 AMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANS 217 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~ 217 (408)
+.+.++|+++|+||||... ..... +...+........+. .+... ...+..+|.+...+
T Consensus 83 l~~~~~p~~~v~GNHD~~~-~~~~~---~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~y~~~~~~--------- 140 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYN-FSRPS---LLSSRLNSAQRTGTD--------TGSDL-IGDDIYAYEFSPAP--------- 140 (322)
T ss_dssp HHTTCSEEEECCCHHHHHH-CCHHH---HHTSTTCCCC--------------CEEC-GGGTCCCEEEEEET---------
T ss_pred HHhcCCcEEEecCCCCccc-CCHHH---HhhhhCCcccccccc--------ccccc-CCCCceEEEEecCC---------
Confidence 3345789999999999842 22222 212121100000000 00000 00234567765521
Q ss_pred ceeEEEEEeCCCCCCcC--------------------C-----------------cCcCCCCcHHHHHHHHHHHHHHhhh
Q 015367 218 SILNLFFLDSGDRETVR--------------------G-----------------VRTYGYIKESQLRWLHRVSEALQGQ 260 (408)
Q Consensus 218 ~~~~~i~LDS~~~~~~~--------------------~-----------------~~~~g~i~~~Ql~WL~~~L~~~~~~ 260 (408)
.+++++||+..++... . ....|.+.++|++||++.|++..+
T Consensus 141 -~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~- 218 (322)
T 2nxf_A 141 -NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH- 218 (322)
T ss_dssp -TEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-
T ss_pred -CEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-
Confidence 3789999997542100 0 012367899999999999988752
Q ss_pred hcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCC-hHHHHHHHhcCCeEEEEeccCCCCCcccCCCC
Q 015367 261 KQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVN-SGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNG 339 (408)
Q Consensus 261 ~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~-~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~g 339 (408)
..+++||++|||+...... . .+ ...+ ..+.+.+.++++|+++||||+|.+......+|
T Consensus 219 ---------~~~~~iv~~H~p~~~~~~~---~-~~--------~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g 277 (322)
T 2nxf_A 219 ---------KQERVLIFSHLPVHPCAAD---P-IC--------LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSG 277 (322)
T ss_dssp ---------HTCEEEEEESSCCCTTSSC---G-GG--------SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTS
T ss_pred ---------cCCcEEEEEccCCCCCCCC---c-cc--------cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCC
Confidence 2568999999999764321 1 00 0123 35667777776799999999999755443789
Q ss_pred eEEEEeCCcCCCCCCCCCCCCceEEEEEecCCCCCCccccceeEEEEEc
Q 015367 340 IWFCYGGGIGYHGYGKAGWPRRARIILAEAGKGENGWMEVEMIKTWKRL 388 (408)
Q Consensus 340 i~~~~~~~sg~~~~~~~~~~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~ 388 (408)
+.++..+++.-.. ....++++++++.+. -.++.|-|.
T Consensus 278 ~~~i~~~~~~~~~----~~~~~y~~v~~~~~~--------~~~~~~~~~ 314 (322)
T 2nxf_A 278 AQHITLEGVIETP----PHSHAFATAYLYEDR--------MVMKGRGRV 314 (322)
T ss_dssp CEEEECCCGGGCC----TTSCEEEEEEECSSE--------EEEEEEETS
T ss_pred ceEEEecchhhCC----CCCCcEEEEEEECCe--------EEEEecccc
Confidence 9888777663221 235799999998422 456666443
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-24 Score=201.24 Aligned_cols=234 Identities=15% Similarity=0.215 Sum_probs=144.5
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
|||+++||+|++....... +.......++.+.+.+++. +||+||++||+++... ...++.+.+.++.
T Consensus 1 mri~~iSD~H~~~~~~~~~--------g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~-- 69 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLY--------GFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGS-- 69 (274)
T ss_dssp CEEEEECCCCBCSTTCCBT--------TTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTT--
T ss_pred CEEEEEecCCcCCCCcccc--------cccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHh--
Confidence 6899999999986422100 0001123445556666654 6899999999886543 3334455555543
Q ss_pred hcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcce
Q 015367 140 ELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSI 219 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~ 219 (408)
.++|+++|+||||... .+.+.+... + . .. +. . .+..+|.+... .
T Consensus 70 -l~~p~~~v~GNHD~~~-----~~~~~~~~~-~-~-~~-~~--------------~-~~~~~~~~~~~-----------~ 113 (274)
T 3d03_A 70 -LNYPLYLIPGNHDDKA-----LFLEYLQPL-C-P-QL-GS--------------D-ANNMRCAVDDF-----------A 113 (274)
T ss_dssp -CSSCEEEECCTTSCHH-----HHHHHHGGG-S-G-GG-CS--------------C-GGGCCEEECSS-----------S
T ss_pred -cCCCEEEECCCCCCHH-----HHHHHhhhh-h-c-Cc-cc--------------C-CCceEEEEEeC-----------C
Confidence 3789999999999842 111111110 0 0 00 00 0 02234555332 3
Q ss_pred eEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccccc
Q 015367 220 LNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQE 299 (408)
Q Consensus 220 ~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e 299 (408)
+++++|||..+.. ..+.+.++|++||++.|++. +..++|+++|||+......+.+...
T Consensus 114 ~~~i~ld~~~~~~-----~~~~~~~~~~~wl~~~l~~~------------~~~~~iv~~H~p~~~~~~~~~~~~~----- 171 (274)
T 3d03_A 114 TRLLFIDSSRAGT-----SKGWLTDETISWLEAQLFEG------------GDKPATIFMHHPPLPLGNAQMDPIA----- 171 (274)
T ss_dssp SEEEECCCCCTTC-----SSBCCCHHHHHHHHHHHHHH------------TTSCEEEEESSCSSCCSCTTTGGGS-----
T ss_pred EEEEEEeCCCCCC-----CCCeeCHHHHHHHHHHHHhC------------CCCCEEEEECCCCcccCCcccCccc-----
Confidence 7899999965421 35679999999999998875 3578999999999764322211110
Q ss_pred ccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCC-C-------CCCCCCceEEEEEec
Q 015367 300 AVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGY-G-------KAGWPRRARIILAEA 369 (408)
Q Consensus 300 ~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~-~-------~~~~~~g~rv~~i~~ 369 (408)
......+.+.+.++++|+++||||+|.. ....++|+.++.+|+++.... . ....++|+++++++.
T Consensus 172 ----~~~~~~l~~~l~~~~~v~~vl~GH~H~~-~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~~ 244 (274)
T 3d03_A 172 ----CENGHRLLALVERFPSLTRIFCGHNHSL-TMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVG 244 (274)
T ss_dssp ----BTTTHHHHHHHHHCTTEEEEEECSSSSC-EEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEET
T ss_pred ----CcCHHHHHHHHHhCCCceEEEeCCCCCc-hhheECCEEEEEcCCcceeeccCCCccccccccCCCceEEEEEeC
Confidence 0123456677777757999999999995 445668887777777654211 0 013467999999984
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-24 Score=213.38 Aligned_cols=261 Identities=16% Similarity=0.165 Sum_probs=148.7
Q ss_pred ccCCCCeEEEEEeccCcCCCCccccCcccc--ccccc----cCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHH
Q 015367 56 FRYDGTFKILQVADMHYGMGKVTRCRDVTA--TEFKY----CSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAE 129 (408)
Q Consensus 56 ~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~ 129 (408)
+.+++.+||+|+||+|++............ ..+.. ......++.+.+.+++.+||+||++||+++... ...+.
T Consensus 34 ~~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~ 112 (443)
T 2xmo_A 34 IEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGE-KTSHE 112 (443)
T ss_dssp BCSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCC-HHHHH
T ss_pred ccCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-HHHHH
Confidence 344568999999999997542100000000 00000 001234566666777789999999999886654 33455
Q ss_pred HHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHH------------HHHHHHHHccCCccccCCCCCCCcccccCCcccccc
Q 015367 130 SMIQAFGPAMELGLPWAAVLGNHDQESTMDRE------------ELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKID 197 (408)
Q Consensus 130 ~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~------------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 197 (408)
.+.+.++.+...++|+++|+||||+.....+. ....|...+.. .+.. .......
T Consensus 113 ~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-------~~~~~~~ 178 (443)
T 2xmo_A 113 ELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSD-------FGYE-------DAISSDE 178 (443)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCC-------CCCT-------TCSEECS
T ss_pred HHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhh-------cChh-------hhhccCC
Confidence 56666666544589999999999997543210 00111111110 0000 0000000
Q ss_pred CccceEEEeeCCCCCCCCCcceeEEEEEeCCCCCCc---CCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCe
Q 015367 198 GFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETV---RGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPG 274 (408)
Q Consensus 198 g~~~y~~~v~~~~~~~~~~~~~~~~i~LDS~~~~~~---~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~ 274 (408)
....|.+... ..+++++|||..+... ......|.+.++|++||++.|++++. .+.++
T Consensus 179 ~~~~y~~~~~----------~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~----------~~~~~ 238 (443)
T 2xmo_A 179 FSLSYLAAPS----------SKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK----------NGAKL 238 (443)
T ss_dssp SSSCEEECSB----------SSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH----------TTCEE
T ss_pred CCceEEEecC----------CCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH----------cCCeE
Confidence 0123333211 2478999999764321 00123477999999999999988752 35678
Q ss_pred EEEecCCCCCccccccCCcccccccccccCCCCh-HHHHHHHhcCCeEEEEeccCCCCCccc--CCCC--eEEEEeCCcC
Q 015367 275 LAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNS-GVLQTLVSLGDIKAVFVGHDHTNDFCG--NLNG--IWFCYGGGIG 349 (408)
Q Consensus 275 iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~-~~l~~l~~~~~V~~v~~GH~H~n~~~~--~~~g--i~~~~~~~sg 349 (408)
||++|||+......+..... ..+. .+.+.+.++ +|+++||||+|.+.... ..+| +..+.+++.+
T Consensus 239 Iv~~H~p~~~~~~~~~~~~~----------~~~~~~l~~ll~~~-~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~ 307 (443)
T 2xmo_A 239 IPVLHHNLTDHNDVIQKGYT----------INYNQQVIDALTEG-AMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALS 307 (443)
T ss_dssp EEECSSBSSCSSCC--CCSB----------CTTHHHHHHHHHHT-TCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTT
T ss_pred EEEECCCCcccccccccccc----------cccHHHHHHHHHHc-CCeEEEECCcccCchhhcccCCCCceEEEEcCccc
Confidence 99999999764333321111 1233 566777776 69999999999965432 1233 4444444322
Q ss_pred CCCCCCCCCCCceEEEEEec
Q 015367 350 YHGYGKAGWPRRARIILAEA 369 (408)
Q Consensus 350 ~~~~~~~~~~~g~rv~~i~~ 369 (408)
. .+.++++++++.
T Consensus 308 ~-------~p~~y~il~i~~ 320 (443)
T 2xmo_A 308 V-------FPHKYGNITYSA 320 (443)
T ss_dssp S-------TTCEEEEEEEET
T ss_pred c-------CCCCeEEEEEeC
Confidence 1 256999999984
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-24 Score=201.21 Aligned_cols=269 Identities=17% Similarity=0.222 Sum_probs=155.9
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc-HHHHHHHHHhhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD-VAESMIQAFGPA 138 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~-~~~~~~~~l~~~ 138 (408)
+.+||+++||+|++....... .......+.+.+.+++.+||+||++||+++..+... ....+.+.+..+
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~ 74 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHT----------AREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDV 74 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSC----------HHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTT
T ss_pred CceEEEEEcccCCCCCccccC----------chHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHH
Confidence 479999999999986421100 001133455666677889999999999876543211 111333334332
Q ss_pred H---hc-CCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCC
Q 015367 139 M---EL-GLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHL 214 (408)
Q Consensus 139 ~---~~-~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~ 214 (408)
+ .. ++|+++|+||||+....... ..+ . ..... ......+|.+.+.-..
T Consensus 75 ~~~~~l~~~p~~~v~GNHD~~~~~~~~--~~~------~--~~~~~--------------~~~~~~~y~~~~~~~~---- 126 (313)
T 1ute_A 75 FSDPSLRNVPWHVLAGNHDHLGNVSAQ--IAY------S--KISKR--------------WNFPSPYYRLRFKIPR---- 126 (313)
T ss_dssp SCSGGGTTCCEEECCCHHHHHSCHHHH--HHG------G--GTSTT--------------EECCSSSEEEEEECTT----
T ss_pred cCchhhcCCCEEEECCCCccCCCcccc--ccc------c--ccCCC--------------ccCcccceEEEEecCC----
Confidence 2 24 79999999999986542211 111 0 00000 1112235555443111
Q ss_pred CCcceeEEEEEeCCCCCCc--------CCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCcc
Q 015367 215 ANSSILNLFFLDSGDRETV--------RGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETP 286 (408)
Q Consensus 215 ~~~~~~~~i~LDS~~~~~~--------~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~ 286 (408)
....+++++|||..+... +.....+.+.++|++||++.|++. ..+++||++|||+....
T Consensus 127 -~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~------------~~~~~iv~~H~p~~~~~ 193 (313)
T 1ute_A 127 -SNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA------------KEDYVLVAGHYPVWSIA 193 (313)
T ss_dssp -SSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC------------CCSEEEEECSSCSSCCS
T ss_pred -CCceEEEEEEEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhC------------CCCeEEEEECCCCccCC
Confidence 012588999999642110 000123557899999999998775 34789999999997643
Q ss_pred ccccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCC------------
Q 015367 287 QLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYG------------ 354 (408)
Q Consensus 287 ~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~------------ 354 (408)
... ... .....+.+.|.++ +|+++||||+|...+....+|+.++.+++.|.....
T Consensus 194 ~~~------~~~------~~~~~l~~~l~~~-~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~ 260 (313)
T 1ute_A 194 EHG------PTH------CLVKQLLPLLTTH-KVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYL 260 (313)
T ss_dssp SSC------CCH------HHHHHTHHHHHHT-TCSEEEECSSSSEEEEECTTCCEEEEECBSSCCCCCCTTGGGSCTTCE
T ss_pred CCC------CcH------HHHHHHHHHHHHc-CCcEEEECChhhhhhccCCCCceEEEECCCcCcCccccccccCCCccc
Confidence 211 000 0112455566666 599999999998666555789988888776642111
Q ss_pred -----CCCCCCceEEEEEecCCCCCCccccceeEEEEEccCCCCCcccceeeecc
Q 015367 355 -----KAGWPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEM 404 (408)
Q Consensus 355 -----~~~~~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~~~ 404 (408)
......|+.+++++.+ .-..++... +|. ++|+..|...
T Consensus 261 ~~~~~~~~~~~gy~~l~v~~~---------~~~~~~~~~-~g~--~~~~~~l~~~ 303 (313)
T 1ute_A 261 RFHFGAENSLGGFAYVEITPK---------EMSVTYIEA-SGK--SLFKTKLPRR 303 (313)
T ss_dssp EEEECCTTSCCEEEEEEECSS---------CEEEEEEET-TSC--EEEEEEECCC
T ss_pred ceeccCcCCCCceEEEEEEcC---------EEEEEEEcC-CCc--EEEEEEeccc
Confidence 0012369999999732 112233334 443 6777666554
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=200.77 Aligned_cols=259 Identities=15% Similarity=0.153 Sum_probs=157.2
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCc----ccHHHHHHH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIFGSST----TDVAESMIQ 133 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~----~~~~~~~~~ 133 (408)
.++||+++||+|.+.. ..+.+ +.+.+. +||+||++||+++..+. ...+..+.+
T Consensus 125 ~~~~f~~~gD~~~~~~--------------------~~~~l-~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~ 183 (426)
T 1xzw_A 125 VPYVFGLIGDIGQTHD--------------------SNTTL-THYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGR 183 (426)
T ss_dssp CCEEEEEECSCTTBHH--------------------HHHHH-HHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCc--------------------hHHHH-HHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHH
Confidence 5799999999997521 11223 334444 89999999999875432 123455666
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCCCCC---HHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCC
Q 015367 134 AFGPAMELGLPWAAVLGNHDQESTMD---REELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPP 210 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~ 210 (408)
.++++ ...+|+++|+||||+..... ......+...+. .|... . ...+..+|++.+.+
T Consensus 184 ~l~~l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~------~p~~~------~-----~~~~~~~ys~~~g~-- 243 (426)
T 1xzw_A 184 FSERS-VAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYP------TPHEA------S-----GSGDPLWYAIKRAS-- 243 (426)
T ss_dssp HHHHH-HTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSC------CCCGG------G-----TCSSTTSEEEEETT--
T ss_pred HHHHH-HhcCCEEEeccccccccCCccccccCChhheEEEe------CCccc------C-----CCCCCCeEEEEECC--
Confidence 66653 55899999999999975310 001112222221 11100 0 11233467776643
Q ss_pred CCCCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCcccccc
Q 015367 211 GSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYY 290 (408)
Q Consensus 211 ~~~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~ 290 (408)
++|++|||... ++ ...+|++||++.|++..+ ...+++||++|+|++......
T Consensus 244 ---------~~~i~Ldt~~~--------~~-~~~~Q~~WL~~~L~~~~~---------~~~~w~Iv~~H~P~~~~~~~~- 295 (426)
T 1xzw_A 244 ---------AHIIVLSSYSG--------FV-KYSPQYKWFTSELEKVNR---------SETPWLIVLVHAPLYNSYEAH- 295 (426)
T ss_dssp ---------EEEEECCTTSC--------CS-TTSHHHHHHHHHHHHCCT---------TTCCEEEEECSSCSSCCBSTT-
T ss_pred ---------EEEEEeeCccc--------CC-CCHHHHHHHHHHHHhhhh---------cCCCEEEEEeccCceeCCCcc-
Confidence 78999999531 11 468999999999987631 135679999999997543210
Q ss_pred CCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccC------------------CCCeEEEEeCCcCCC-
Q 015367 291 QNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGN------------------LNGIWFCYGGGIGYH- 351 (408)
Q Consensus 291 ~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~------------------~~gi~~~~~~~sg~~- 351 (408)
.+ ++. .....+...|.++ +|+++|+||+|.+++... .+|+.++..|+.|..
T Consensus 296 ---~~---~~~---~~r~~l~~ll~~~-~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~ 365 (426)
T 1xzw_A 296 ---YM---EGE---AMRAIFEPYFVYY-KVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSE 365 (426)
T ss_dssp ---TT---TTH---HHHHHHHHHHHHT-TCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTT
T ss_pred ---cC---CCH---HHHHHHHHHHHHh-CCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCcccc
Confidence 00 100 0123566666666 599999999999764331 245555555554431
Q ss_pred ----CCC--CCCC------CCceEEEEEecCCCCCCccccceeEEEEEccCCCCCcccceeeeccC
Q 015367 352 ----GYG--KAGW------PRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEMC 405 (408)
Q Consensus 352 ----~~~--~~~~------~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~~~~ 405 (408)
.+. .++| ..|+-.+++.- + .+...+|++.++|+.+++|+.+|....
T Consensus 366 ~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n-~-------t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 366 GLASEMTQPQPSYSAFREASFGHGIFDIKN-R-------THAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp CCCCCBCSSCCTTEEEEECCCEEEEEEECS-S-------SEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred ccccccCCCCCCceeEEecCCCeEEEEEEc-C-------CeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 111 0111 35777777752 2 145678899989887799999987654
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-23 Score=198.52 Aligned_cols=254 Identities=13% Similarity=0.054 Sum_probs=141.2
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhh--
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPA-- 138 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~-- 138 (408)
++||++++|+|.+... .....+.|.+.+++.+|||||++||+++.+........+.+.+..+
T Consensus 3 ~l~f~~igD~g~g~~~----------------q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~ 66 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKG----------------QILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYS 66 (342)
T ss_dssp CEEEEECCSCBSCCHH----------------HHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSC
T ss_pred eEEEEEEecCCCCCch----------------HHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhh
Confidence 6999999999986432 1234567778888899999999999998742111112233333322
Q ss_pred ---HhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccc----cCCCCCCCcccccCCccccccCccceEE----Eee
Q 015367 139 ---MELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQ----VNPPAEDPSNLAKGGVMEKIDGFGNYDL----RVY 207 (408)
Q Consensus 139 ---~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~~~~~g~~~y~~----~v~ 207 (408)
...++|||+|+||||+..+... ++ ++...+ +.... +........... +.....+|++ ++.
T Consensus 67 ~~~~~~~~P~~~vlGNHD~~~~~~a-q~-~~~~~~-~~~~~~~~~~~~~~~~~~~~r------w~~P~~yY~~~~~f~~~ 137 (342)
T 3tgh_A 67 EEKGDMYMPFFTVLGTRDWTGNYNA-QL-LKGQGI-YIEKNGETSIEKDADATNYPK------WIMPNYWYHYFTHFTVS 137 (342)
T ss_dssp CGGGTTCSEEEECCCHHHHTSCHHH-HH-HHHHC----------------CCCSSCE------EECSSSSEEEEEEEEEC
T ss_pred hhhhhhCCCEEEeCCCCccCCCchH-hh-hhhhcc-cccccccccccccccccCCCC------ccCCcceEEEEEEeecc
Confidence 2357999999999999865322 11 111100 00000 000000000000 2222224443 211
Q ss_pred CCCCCC---CCCcceeEEEEEeCCCCCCcCCc-CcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCC
Q 015367 208 GPPGSH---LANSSILNLFFLDSGDRETVRGV-RTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIP 283 (408)
Q Consensus 208 ~~~~~~---~~~~~~~~~i~LDS~~~~~~~~~-~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~ 283 (408)
. .... ......++|++|||+........ ...+...++|++||+++|+. .+++||++|||++
T Consensus 138 ~-~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~--------------~~~~IV~~HhP~~ 202 (342)
T 3tgh_A 138 S-GPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI--------------ADFIIVVGDQPIY 202 (342)
T ss_dssp ----------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH--------------CSEEEEECSSCSS
T ss_pred c-cccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc--------------CCcEEEEECCCCC
Confidence 0 0000 00012478999999754321000 00112457999999999832 4699999999998
Q ss_pred CccccccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCC---CC----
Q 015367 284 ETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYG---KA---- 356 (408)
Q Consensus 284 ~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~---~~---- 356 (408)
..... +... .....++..|.++ +|+++||||+|.+++ ...+|+.++.+|+.|..... ..
T Consensus 203 ~~~~~------~~~~------~l~~~l~~ll~~~-~VdlvlsGH~H~~~~-~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~ 268 (342)
T 3tgh_A 203 SSGYS------RGSS------YLAYYLLPLLKDA-EVDLYISGHDNNMEV-IEDNDMAHITCGSGSMSQGKSGMKNSKSL 268 (342)
T ss_dssp CSSTT------CCCH------HHHHHTHHHHHHT-TCCEEEECSSSSEEE-EEETTEEEEEECCSSCCCCCCSSCCTTEE
T ss_pred CCCCC------CCcH------HHHHHHHHHHHHc-CCCEEEECCCcceeE-EeeCCcEEEEeCccccccccCCCCCCcce
Confidence 65321 1000 0113566667676 699999999999654 34578888777766542211 10
Q ss_pred --CCCCceEEEEEe
Q 015367 357 --GWPRRARIILAE 368 (408)
Q Consensus 357 --~~~~g~rv~~i~ 368 (408)
..+.|+.+++++
T Consensus 269 f~~~~~Gf~~l~v~ 282 (342)
T 3tgh_A 269 FFSSDIGFCVHELS 282 (342)
T ss_dssp EEECSSEEEEEEEE
T ss_pred eecCCCcEEEEEEE
Confidence 135799999997
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=193.63 Aligned_cols=258 Identities=15% Similarity=0.183 Sum_probs=151.5
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--CCCEEEEcCCcCCCCCc----ccHHHHHHH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--KPDFIAFTGDNIFGSST----TDVAESMIQ 133 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~pD~vv~~GDli~~~~~----~~~~~~~~~ 133 (408)
.++||+++||+|.+... .+.+ +.+.+. +||+||++||+++.... ...++.+.+
T Consensus 118 ~~~~f~~igD~~~~~~~--------------------~~~l-~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~ 176 (424)
T 2qfp_A 118 VPYTFGLIGDLGQSFDS--------------------NTTL-SHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGR 176 (424)
T ss_dssp CCEEEEEECSCTTBHHH--------------------HHHH-HHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCCh--------------------HHHH-HHHHhCCCCCCEEEEcCccccccccccccchHHHHHHH
Confidence 57999999999976321 1223 334443 89999999999976532 123455566
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCCCCCHH---HHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCC
Q 015367 134 AFGPAMELGLPWAAVLGNHDQESTMDRE---ELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPP 210 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~ 210 (408)
.++++ ...+|+++|+||||+....... ....+...+. .|... ....+..+|++.+++
T Consensus 177 ~l~~~-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~------~P~~~-----------~~~~~~~~ys~~~g~-- 236 (424)
T 2qfp_A 177 FTERS-VAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYH------VPYEA-----------SQSTSPFWYSIKRAS-- 236 (424)
T ss_dssp HHHHH-HTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCC------CCGGG-----------GTCSSTTSEEEEETT--
T ss_pred HHHHH-HhcCCeEeecCCcccccCCcccccccchhhhhhcc------CCccc-----------cCCCCCcEEEEEECC--
Confidence 66653 5579999999999986421000 0112222221 11100 011233477777642
Q ss_pred CCCCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCcccccc
Q 015367 211 GSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYY 290 (408)
Q Consensus 211 ~~~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~ 290 (408)
++|++|||... ++ ...+|++||++.|++..+ ...+++||++|+|++......
T Consensus 237 ---------~~~i~Ldt~~~--------~~-~~~~Q~~WL~~~L~~~~~---------~~~~~~Iv~~H~P~~~~~~~~- 288 (424)
T 2qfp_A 237 ---------AHIIVLSSYSA--------YG-RGTPQYTWLKKELRKVKR---------SETPWLIVLMHSPLYNSYNHH- 288 (424)
T ss_dssp ---------EEEEECCTTSC--------CS-TTSHHHHHHHHHHHHCCT---------TTCCEEEEECSSCSSCCBSTT-
T ss_pred ---------EEEEEecCCcc--------CC-CcHHHHHHHHHHHhhhcc---------cCCCEEEEEeCcCceecCccc-
Confidence 78999999531 22 235899999999987631 135689999999998642110
Q ss_pred CCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCC------------------CCeEEEEeCCcCCC-
Q 015367 291 QNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNL------------------NGIWFCYGGGIGYH- 351 (408)
Q Consensus 291 ~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~------------------~gi~~~~~~~sg~~- 351 (408)
+.++. .....+...|.++ +|+++|+||+|.+++.... +|..++..|+.|..
T Consensus 289 ------~~~~~---~~r~~l~~ll~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~ 358 (424)
T 2qfp_A 289 ------FMEGE---AMRTKFEAWFVKY-KVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG 358 (424)
T ss_dssp ------TTTTH---HHHHHHHHHHHHT-TCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTS
T ss_pred ------ccccH---HHHHHHHHHHHHh-CCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCcc
Confidence 00100 0123455666665 6999999999996544321 23444444443321
Q ss_pred ----CCCC--CCC------CCceEEEEEecCCCCCCccccceeEEEEEccCCCCCcccceeeecc
Q 015367 352 ----GYGK--AGW------PRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEM 404 (408)
Q Consensus 352 ----~~~~--~~~------~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~~~ 404 (408)
.+.. ++| ..|+-.+++.. + .+...+|++..+|...+.|+-+|...
T Consensus 359 ~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n-~-------t~~~~~~~~~~~g~~~~~D~~~i~~~ 415 (424)
T 2qfp_A 359 VIDSNMIQPQPEYSAFREASFGHGMFDIKN-R-------THAHFSWNRNQDGVAVEADSVWFFNR 415 (424)
T ss_dssp CCCCCBCSSCCTTEEEEECCCEEEEEEECS-S-------SEEEEEEEETTSCTTCCSEEEEEECT
T ss_pred ccCccCCCCCCCcceEEecCCCEEEEEEEc-C-------cEEEEEEEECCCCCEEeeeEEEEEec
Confidence 1111 112 34777777752 2 14556789988888667899888765
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-17 Score=150.02 Aligned_cols=72 Identities=19% Similarity=0.172 Sum_probs=51.6
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
.+||+++||+|.+.. .++.+.+.+++.+||+||++||+++.....+.+..+ ++.+.+
T Consensus 5 ~mri~~iSD~H~~~~--------------------~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~---~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDLE--------------------ALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAF---FRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHH--------------------HHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHH---HHHHGG
T ss_pred eEEEEEEeeccCCHH--------------------HHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHH---HHHHHh
Confidence 589999999997521 235566667777999999999988665333323333 333334
Q ss_pred cCCCEEEEcCCCCCC
Q 015367 141 LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~ 155 (408)
.+.|+++|+||||..
T Consensus 62 ~~~pv~~v~GNHD~~ 76 (228)
T 1uf3_A 62 AHLPTAYVPGPQDAP 76 (228)
T ss_dssp GCSCEEEECCTTSCS
T ss_pred cCCcEEEECCCCCch
Confidence 478999999999985
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=156.51 Aligned_cols=234 Identities=15% Similarity=0.110 Sum_probs=123.1
Q ss_pred CCCccccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc-ccHHH
Q 015367 51 DLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST-TDVAE 129 (408)
Q Consensus 51 ~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~-~~~~~ 129 (408)
.+|..+. +|||+|+||+|++...... ..+. ......++.+.+.+++.+||+||++||+++.... .....
T Consensus 13 ~~~~~~~---~mrilhiSD~Hlg~~~~~~-----~~r~--~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~ 82 (386)
T 3av0_A 13 GLVPRGS---HMMFVHIADNHLGYRQYNL-----DDRE--KDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALR 82 (386)
T ss_dssp -----CC---CCEEEEECCCCBTCCGGGC-----HHHH--HHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHH
T ss_pred ccccCCC---CeEEEEEccCCCCccccCc-----chhh--HHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHH
Confidence 3554543 7999999999998643210 0000 0001235566667777899999999998866532 22334
Q ss_pred HHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCC
Q 015367 130 SMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGP 209 (408)
Q Consensus 130 ~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~ 209 (408)
.+.+.+..+...++|+++|+||||............. +.... ...+...+. +.+
T Consensus 83 ~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~---l~~~v--------------------~~l~~~~v~--~~~- 136 (386)
T 3av0_A 83 IAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLAL---LKDYV--------------------KILDGKDVI--NVN- 136 (386)
T ss_dssp HHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGG---GTTTC--------------------EECSEEEEE--EET-
T ss_pred HHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHH---HHHHe--------------------EEcCCCcEE--EeC-
Confidence 5566666654557999999999998653211000000 00000 111111111 111
Q ss_pred CCCCCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccc
Q 015367 210 PGSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLY 289 (408)
Q Consensus 210 ~~~~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~ 289 (408)
...+.++.++.... ....+..+||+..-.+.. ...+.|+++|+|+..+.+
T Consensus 137 -------~~~v~i~gl~~~~~----------~~~~~~~~~l~~l~~~~~-----------~~~~~Ill~H~~~~~~~~-- 186 (386)
T 3av0_A 137 -------GEEIFICGTYYHKK----------SKREEMLDKLKNFESEAK-----------NYKKKILMLHQGINPYIP-- 186 (386)
T ss_dssp -------TEEEEEEEECCCCS----------TTHHHHHHHHHHHHHHHH-----------TCSSEEEEECCCCTTTSS--
T ss_pred -------CCCEEEEeCCCCCH----------HHHHHHHHHHHHhhhhcc-----------cCCCEEEEECcCccccCC--
Confidence 12356777776321 122333444433211121 357899999999864311
Q ss_pred cCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCC----CCCceEEE
Q 015367 290 YQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAG----WPRRARII 365 (408)
Q Consensus 290 ~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~----~~~g~rv~ 365 (408)
+.+. .. +...++++++++||+|.. .....++..++|.|++....++..+ .++|+.++
T Consensus 187 -----~~~~-------~~------~~~l~~~d~v~~GH~H~~-~~~~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv 247 (386)
T 3av0_A 187 -----LDYE-------LE------HFDLPKFSYYALGHIHKR-ILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLV 247 (386)
T ss_dssp -----SSCS-------SC------GGGSCCCSEEEECSCCSC-EEEECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEE
T ss_pred -----CCcc-------cC------HHHhhhCCeEEccCCCCC-ccccCCCceEEECCcccccCcchhccccCCCCEEEEE
Confidence 1100 00 011224899999999984 4344567778888777432222110 24688888
Q ss_pred EEec
Q 015367 366 LAEA 369 (408)
Q Consensus 366 ~i~~ 369 (408)
+++.
T Consensus 248 ~i~~ 251 (386)
T 3av0_A 248 DFSG 251 (386)
T ss_dssp ECCS
T ss_pred EEec
Confidence 8863
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-16 Score=150.21 Aligned_cols=246 Identities=13% Similarity=0.042 Sum_probs=121.9
Q ss_pred CCeEEEEEeccCcCCC----CccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCC-cCCCCCccc-HHHHHHH
Q 015367 60 GTFKILQVADMHYGMG----KVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGD-NIFGSSTTD-VAESMIQ 133 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GD-li~~~~~~~-~~~~~~~ 133 (408)
.+|||+|+||+|+|.. ..+..+ . ......++.+.+.+++.+||+||++|| +++...... ....+.+
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r------~--~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~ 88 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDR------R--EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLD 88 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEEC------H--HHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcCh------h--HHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHH
Confidence 3799999999999932 111000 0 001244677777888899999999999 876554322 2345566
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCC
Q 015367 134 AFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSH 213 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~ 213 (408)
.+..+.+. +|+++|+||||... . ....++.........-.... ....++. ..
T Consensus 89 ~l~~L~~~-~pv~~i~GNHD~~~-~--~~~~~~l~~~g~nv~v~~~~--------------------~~~~~~~-~~--- 140 (336)
T 2q8u_A 89 YLKRMMRT-APVVVLPGNHDWKG-L--KLFGNFVTSISSDITFVMSF--------------------EPVDVEA-KR--- 140 (336)
T ss_dssp HHHHHHHH-SCEEECCC-------C--HHHHHHHHHHCSSEEECCSS--------------------SCEEEEC-TT---
T ss_pred HHHHHHhc-CCEEEECCCCCccc-c--ccHHHHHHhcCCEEEEEecc--------------------cccCceE-Ee---
Confidence 66665444 89999999999865 2 22223322211000000000 0000000 00
Q ss_pred CCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCc
Q 015367 214 LANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNI 293 (408)
Q Consensus 214 ~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~ 293 (408)
...+.++.++........ ...+....+|++|+.+.+..... ....+.|+++|+|+...........
T Consensus 141 ---~~~v~i~glp~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~Ill~H~~~~~~~~~~~~~~ 206 (336)
T 2q8u_A 141 ---GQKVRILPFPYPDESEAL--RKNEGDFRFFLESRLNKLYEEAL---------KKEDFAIFMGHFTVEGLAGYAGIEQ 206 (336)
T ss_dssp ---SCEEEEEEECCC---------CCSSHHHHHHHHHHHHHHHHHH---------TCSSEEEEEEESEETTCC-------
T ss_pred ---CCCEEEEECCCCCHHHHH--HHhhHHHHHHHHHHHHHHHHhcc---------CCCCCEEEEECccccCCCCCCCccc
Confidence 013556666542211000 01123446788888877654210 1467899999999864321100000
Q ss_pred ccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEec
Q 015367 294 VGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEA 369 (408)
Q Consensus 294 ~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~~ 369 (408)
. ..+. +-..+.+. +++++++||+|..... . .+..++|.|+.....++..+.++|+-+++++.
T Consensus 207 ~--~~~~---------v~~~l~~~-~~d~v~~GH~H~~~~~-~-~~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~~ 268 (336)
T 2q8u_A 207 G--REII---------INRALIPS-VVDYAALGHIHSFREI-Q-KQPLTIYPGSLIRIDFGEEADEKGAVFVELKR 268 (336)
T ss_dssp ---CCCE---------ECGGGSCT-TSSEEEEESCSSCEEE-E-ETTEEEECCCSSCCSGGGTTCCCEEEEEEEET
T ss_pred h--hhcc---------cCHHHccc-cCCEEEEccccCceEe-C-CCccEEECCCCcCCCccccCCCCEEEEEEEeC
Confidence 0 0000 00112232 5999999999985332 2 23456666655222233223467999999984
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-16 Score=146.29 Aligned_cols=75 Identities=21% Similarity=0.309 Sum_probs=52.1
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccH-------------
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDV------------- 127 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~------------- 127 (408)
++||+++||+|.+.. .++.+.+.++..+||+||++||+++.......
T Consensus 5 ~mri~~iSDlH~~~~--------------------~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~ 64 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD--------------------LLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 64 (260)
T ss_dssp CCEEEEEECCTTCGG--------------------GHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCT
T ss_pred eEEEEEEeecCCChH--------------------HHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccch
Confidence 589999999998642 13456666677899999999998765421000
Q ss_pred ----------HHHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 128 ----------AESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 128 ----------~~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
.+.+.+.++.+.+.++|+++|+||||..
T Consensus 65 ~~~~~~~~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~ 102 (260)
T 2yvt_A 65 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAP 102 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCCcEEEEcCCCCch
Confidence 0234444554444478999999999985
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-14 Score=140.93 Aligned_cols=243 Identities=15% Similarity=0.129 Sum_probs=125.4
Q ss_pred eEEEEEeccCcCCC----CccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcC-CCCCc-ccHHHHHHHHH
Q 015367 62 FKILQVADMHYGMG----KVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNI-FGSST-TDVAESMIQAF 135 (408)
Q Consensus 62 ~ri~~iSDlH~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli-~~~~~-~~~~~~~~~~l 135 (408)
|||+|+||+|++.. ..+..+ . ......++.+.+.+++.+||+||++||++ +.... ......+.+.+
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~------~--~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l 72 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDR------R--EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYL 72 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEEC------H--HHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcCh------h--HHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHH
Confidence 69999999999876 211100 0 00123456677777788999999999988 54332 23345666777
Q ss_pred hhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCC
Q 015367 136 GPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLA 215 (408)
Q Consensus 136 ~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~ 215 (408)
..+... +|+++|+||||... ..........++...... .....+.+ ....+
T Consensus 73 ~~l~~~-~~v~~i~GNHD~~~---~~~~~~~~~~~~~~~~~~-------------------~~~~~v~l--~~~~G---- 123 (379)
T 3tho_B 73 KRMMRT-APVVVLPGNQDWKG---LKLFGNFVTSISSDITFV-------------------MSFEPVDV--EAKRG---- 123 (379)
T ss_dssp HHHHHH-SCEEECCCTTSCTT---HHHHHHHHHTTCSSEEEC-------------------CSSCCEEE--ECTTC----
T ss_pred HHHHhC-CCEEEEcCCCcccc---CccccccccccCCcceee-------------------cccceEEE--EcCCC----
Confidence 766555 99999999999532 111111111111110000 00011121 11111
Q ss_pred CcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccc-cccCCcc
Q 015367 216 NSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQ-LYYQNIV 294 (408)
Q Consensus 216 ~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~-~~~~~~~ 294 (408)
..+.++.+.-..... .......++.+|+.+.++++-.+. .....+.|+++|.++..... .......
T Consensus 124 --~~v~i~glp~~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~------~~~~~~~I~l~H~~v~g~~~~~~se~~~ 190 (379)
T 3tho_B 124 --QKVRILPFPYPDESE-----ALRKNEGDFRFFLESRLNKLYEEA------LKKEDFAIFMGHFTVEGLAGYAGIEQGR 190 (379)
T ss_dssp --CEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHH------HTCSSEEEEEEESCBSCCCC-------C
T ss_pred --CEEEEEECCCCCHHH-----HhhhhccchHHHHHHHHHHHHHHh------cCCCCCeEEEEeccccCCccCCCCcccc
Confidence 123444443321100 111245678899998887432110 12567789999998864321 1100000
Q ss_pred cccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEec
Q 015367 295 GQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAEA 369 (408)
Q Consensus 295 g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~~ 369 (408)
.. ... ..+.. .+++++++||.|.... . .++..+.|.|+.....++..+.+.|+-+++++.
T Consensus 191 ---~~-----~v~----~~~~~-~~~dyvalGH~H~~q~-~-~~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~ 250 (379)
T 3tho_B 191 ---EI-----IIN----RALIP-SVVDYAALGHIHSFRE-I-QKQPLTIYPGSLIRIDFGEEADEKGAVFVELKR 250 (379)
T ss_dssp ---SC-----CBC----GGGSC-TTSSEEEEESCSSCEE-E-EETTEEEECCCSSCCSGGGSSSCCEEEEEECCS
T ss_pred ---cc-----ccC----HHHcC-cCCCEEEcccccCCeE-e-CCCCcEEecCCCCCCCcccccCCCEEEEEEEcC
Confidence 00 001 11222 3589999999998422 1 122467777766322233223457888888874
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-14 Score=144.48 Aligned_cols=212 Identities=12% Similarity=0.135 Sum_probs=121.4
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc-------------
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD------------- 126 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~------------- 126 (408)
.++||+++||.+...... ... +.+.+.+|||||++||+|+.+....
T Consensus 115 ~~~rfa~~sc~~~~~g~~-----------------~~~----~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~ 173 (527)
T 2yeq_A 115 PQMTFAFASCQQYEHGYY-----------------TAY----KHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNS 173 (527)
T ss_dssp CCEEEEEECCCCGGGCCC-----------------HHH----HHHTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSS
T ss_pred CCeEEEEEecCCCCCCcc-----------------HHH----HHHHhcCCCEEEecCCcccCCCCCcccccccccccCCc
Confidence 479999999998743211 122 2233479999999999998764210
Q ss_pred ----HHHHHHHH---------HhhhHhcCCCEEEEcCCCCCCCCCCHH-----------------HHHHHHHHccCCccc
Q 015367 127 ----VAESMIQA---------FGPAMELGLPWAAVLGNHDQESTMDRE-----------------ELMYFISLMDYSVAQ 176 (408)
Q Consensus 127 ----~~~~~~~~---------l~~~~~~~~p~~~v~GNHD~~~~~~~~-----------------~~~~~~~~~~~~~~~ 176 (408)
....+... ++. +.+.+|+++++||||+.++.... ....|+..+|.....
T Consensus 174 ~e~~tl~~yr~~y~~~~~dp~lq~-~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~ 252 (527)
T 2yeq_A 174 AEIITLQDYRNRHAQYRSDANLKA-AHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISS 252 (527)
T ss_dssp SSCCSHHHHHHHHHHHHTCHHHHH-HHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGG
T ss_pred ccccCHHHHHHHHHHHhCCHHHHH-HHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCccc
Confidence 11222211 222 24579999999999997653210 111222222321100
Q ss_pred cCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcceeEEEEEeCCCCCCcCC-------------cCcCCCCc
Q 015367 177 VNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRG-------------VRTYGYIK 243 (408)
Q Consensus 177 ~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~~~i~LDS~~~~~~~~-------------~~~~g~i~ 243 (408)
.|.+ ....-+|++.+++ .+.|++||+..|..... .+....++
T Consensus 253 -~p~~--------------~~~~~y~sf~~G~----------lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG 307 (527)
T 2yeq_A 253 -LPNG--------------PDMQLYRHFTYGN----------LASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLG 307 (527)
T ss_dssp -CCBT--------------TBCCCCEEEEETT----------TEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSC
T ss_pred -CCCC--------------CCceEEEEEEcCC----------cceEEEEeccccccccccccccccccccccCCcccccC
Confidence 0110 0112367777653 26899999986543211 01224578
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccc-cccCCCChHHHHHHHhcCCe--
Q 015367 244 ESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEA-VACSRVNSGVLQTLVSLGDI-- 320 (408)
Q Consensus 244 ~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~-~~~~~~~~~~l~~l~~~~~V-- 320 (408)
.+|++||++.|++. ...+.||+.|+|+............ ...|. ...+....+++..|.+++ |
T Consensus 308 ~~Q~~WL~~~L~~s------------~a~W~Iv~s~~p~~~~~~~~g~~~~-~~~D~W~g~~~~R~~Ll~~l~~~~-v~n 373 (527)
T 2yeq_A 308 KEQEQWLFNNLGSS------------TAHWNVLAQQIFFAKWNFGTSASPI-YSMDSWDGYPAQRERVINFIKSKN-LNN 373 (527)
T ss_dssp HHHHHHHHHHHHHC------------CSSEEEEECSSCCSCCCSSCSSSCC-EETTSGGGSHHHHHHHHHHHHHTT-CCC
T ss_pred HHHHHHHHHHHhcC------------CCCeEEEEeCCcccccccCCCcccc-cCccchhccHHHHHHHHHHHHHhC-CCC
Confidence 99999999998763 4679999999999764321000000 00010 001122346888887764 7
Q ss_pred EEEEeccCCCCC
Q 015367 321 KAVFVGHDHTND 332 (408)
Q Consensus 321 ~~v~~GH~H~n~ 332 (408)
.++|+||+|...
T Consensus 374 ~vvLsGDvH~~~ 385 (527)
T 2yeq_A 374 VVVLTGDVHASW 385 (527)
T ss_dssp EEEEECSSSSEE
T ss_pred EEEEEcchHHHh
Confidence 599999999964
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.54 E-value=5.8e-14 Score=137.29 Aligned_cols=93 Identities=20% Similarity=0.325 Sum_probs=59.3
Q ss_pred cCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcc-cHHHHHHHHH
Q 015367 57 RYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTT-DVAESMIQAF 135 (408)
Q Consensus 57 ~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~-~~~~~~~~~l 135 (408)
.+.+++||+|+||+|++.......+. .....+++.+.+.+++.+||+||++||+++..... .....+.+.+
T Consensus 9 ~~~~~mrilhiSDlHLg~~~~~~~~~--------~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~l 80 (417)
T 4fbw_A 9 HNENTIRILISSDPHVGYGEKDPVRG--------NDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSL 80 (417)
T ss_dssp -CTTCEEEEEECCCCBTTTTTCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHH
T ss_pred CCCCCeEEEEEEcCCCCCcccccccc--------hhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHH
Confidence 34468999999999999754321110 01124567777888889999999999988765432 2223333333
Q ss_pred hh------------hH---------------------hcCCCEEEEcCCCCCCCC
Q 015367 136 GP------------AM---------------------ELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 136 ~~------------~~---------------------~~~~p~~~v~GNHD~~~~ 157 (408)
.. +. ..++|+|+|.||||....
T Consensus 81 r~~~~g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~ 135 (417)
T 4fbw_A 81 RLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG 135 (417)
T ss_dssp HHHHBSSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC---
T ss_pred HHhcccCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccc
Confidence 32 11 248999999999998643
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.7e-15 Score=137.25 Aligned_cols=105 Identities=6% Similarity=-0.064 Sum_probs=59.5
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCCh-HHHHHHHhcC
Q 015367 240 GYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNS-GVLQTLVSLG 318 (408)
Q Consensus 240 g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~-~~l~~l~~~~ 318 (408)
+.++++|++||++....... ......++++|+++... .. .... +..+. .+.+.+.+.+
T Consensus 108 ~~l~~~~~~~L~~lp~~~~~---------~~~~~~i~~~H~~p~~~--~~-~~~~---------~~~~~~~l~~~~~~~~ 166 (252)
T 1nnw_A 108 EKLGHEGREYLRDLPIYLVD---------KIGGNEVFGVYGSPINP--FD-GEVL---------AEQPTSYYEAIMRPVK 166 (252)
T ss_dssp HHHHHHHHHHHHTSCSCEEE---------EETTEEEEEESSCSSCT--TT-CCCC---------SSCCHHHHHHHHGGGT
T ss_pred HHCCHHHHHHHHhCCceEEE---------eeCCcEEEEEcCCCCCC--cc-cccC---------CCCCHHHHHHHHhcCC
Confidence 34678899998763211110 01235799999987321 11 0000 01222 4445555553
Q ss_pred CeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEe
Q 015367 319 DIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAE 368 (408)
Q Consensus 319 ~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~ 368 (408)
++++++|||+|. ......+|+.++..|+.|....+ +...++.+++++
T Consensus 167 ~~~~vi~GHtH~-~~~~~~~~~~~in~Gs~~~~~~~--~~~~~y~il~~~ 213 (252)
T 1nnw_A 167 DYEMLIVASPMY-PVDAMTRYGRVVCPGSVGFPPGK--EHKATFALVDVD 213 (252)
T ss_dssp TSSEEEESTTCS-EEEEEETTEEEEEECCSSSCSSS--SCCEEEEEEETT
T ss_pred CCCEEEECCccc-cceEecCCeEEEECCCccCCCCC--CCcceEEEEECC
Confidence 699999999999 45556788888887777653222 123456665543
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-13 Score=134.71 Aligned_cols=90 Identities=23% Similarity=0.393 Sum_probs=61.8
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc-ccHHHHHHHHHhhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST-TDVAESMIQAFGPA 138 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~-~~~~~~~~~~l~~~ 138 (408)
+.|||+|+||+|++.......+.. ....+++.+.+.+++.+||+||++||+++.... ......+.+.+..+
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~--------d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~ 102 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGN--------DTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKY 102 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTT--------HHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeccCCCCcccccchhh--------hHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHH
Confidence 579999999999997653221110 012345677777888999999999998876543 22344445555432
Q ss_pred H---------------------------------hcCCCEEEEcCCCCCCCC
Q 015367 139 M---------------------------------ELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 139 ~---------------------------------~~~~p~~~v~GNHD~~~~ 157 (408)
. ..++|+|+|.||||....
T Consensus 103 ~~~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g 154 (431)
T 3t1i_A 103 CMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTG 154 (431)
T ss_dssp HBCSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBT
T ss_pred hccCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCccc
Confidence 1 347999999999998753
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.51 E-value=7.2e-13 Score=127.18 Aligned_cols=88 Identities=24% Similarity=0.309 Sum_probs=59.1
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc-ccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST-TDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~-~~~~~~~~~~l~~~~~ 140 (408)
|||+|+||+|++...... +... ......++.+.+.+++.+||+||++||+++.... ......+.+.+..+..
T Consensus 1 mkilh~sD~Hlg~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~ 73 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHK-----PQRE--EEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKE 73 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-----HHHH--HHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHT
T ss_pred CEEEEEcccCCCCcccCC-----chhh--HHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 689999999998643110 0000 0001234566677778899999999998876432 2234555666666545
Q ss_pred cCCCEEEEcCCCCCCC
Q 015367 141 LGLPWAAVLGNHDQES 156 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~ 156 (408)
.++|+++|+||||...
T Consensus 74 ~~~~v~~v~GNHD~~~ 89 (333)
T 1ii7_A 74 HSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp TTCCEEEECCTTTCCS
T ss_pred CCCcEEEeCCcCCCcc
Confidence 5799999999999864
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.6e-13 Score=133.70 Aligned_cols=92 Identities=21% Similarity=0.338 Sum_probs=60.9
Q ss_pred CCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcc-cHHHHHHHHHh
Q 015367 58 YDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTT-DVAESMIQAFG 136 (408)
Q Consensus 58 ~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~-~~~~~~~~~l~ 136 (408)
+.+.|||+|+||+|++.......+. ......++.+.+.+++.+||+||++||+++..... .....+.+.+.
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~--------~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr 144 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRG--------NDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLR 144 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecccCCCcccCcccc--------hhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHH
Confidence 3467999999999999764321110 01123567778888889999999999988766432 12223333333
Q ss_pred h------------h---------------------HhcCCCEEEEcCCCCCCCC
Q 015367 137 P------------A---------------------MELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 137 ~------------~---------------------~~~~~p~~~v~GNHD~~~~ 157 (408)
. + ...++|+|+|.||||....
T Consensus 145 ~~~~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~ 198 (472)
T 4fbk_A 145 LNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG 198 (472)
T ss_dssp HHHBSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC
T ss_pred HhcccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccc
Confidence 2 1 1348999999999999654
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-13 Score=121.14 Aligned_cols=74 Identities=27% Similarity=0.279 Sum_probs=45.4
Q ss_pred CCCCCccccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHH
Q 015367 49 YPDLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVA 128 (408)
Q Consensus 49 ~~~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~ 128 (408)
++.+|..|. +.+||+++||+|. .. ..++.+.+.+++.+||+|+++||+++.
T Consensus 15 ~~~~~~~~~--g~m~i~~iSD~Hg-~~-------------------~~l~~~l~~~~~~~~D~ii~~GDl~~~------- 65 (190)
T 1s3l_A 15 PTTENLYFQ--GHMKIGIMSDTHD-HL-------------------PNIRKAIEIFNDENVETVIHCGDFVSL------- 65 (190)
T ss_dssp -------------CEEEEECCCTT-CH-------------------HHHHHHHHHHHHSCCSEEEECSCCCST-------
T ss_pred CcccChhhc--CCeEEEEEeeCCC-CH-------------------HHHHHHHHHHhhcCCCEEEECCCCCCH-------
Confidence 566787776 3399999999992 11 234556666777899999999998641
Q ss_pred HHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 129 ESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 129 ~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
...+.+. +.+.|+++|+||||..
T Consensus 66 -~~~~~l~---~l~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 66 -FVIKEFE---NLNANIIATYGNNDGE 88 (190)
T ss_dssp -HHHHHGG---GCSSEEEEECCTTCCC
T ss_pred -HHHHHHH---hcCCCEEEEeCCCcch
Confidence 1222222 3367999999999985
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=7.2e-13 Score=123.75 Aligned_cols=73 Identities=16% Similarity=0.125 Sum_probs=48.6
Q ss_pred CCCccccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHH
Q 015367 51 DLPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAES 130 (408)
Q Consensus 51 ~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~ 130 (408)
++|..+ +.+||++|||+|..... + +-.++|+||++||+++.+. .+..+.
T Consensus 52 ~~p~~~---~~mri~~iSD~H~~~~~-----------------------l----~i~~~D~vi~aGDl~~~g~-~~e~~~ 100 (296)
T 3rl5_A 52 DTPKPA---GHTRFVCISDTRSRTDG-----------------------I----QMPYGDILLHTGDFTELGL-PSEVKK 100 (296)
T ss_dssp TSCCCT---TEEEEEEEBCCTTCCTT-----------------------C----CCCSCSEEEECSCCSSSCC-HHHHHH
T ss_pred CCCCCC---CCeEEEEEeeCCCCcch-----------------------h----ccCCCCEEEECCcccCCCC-HHHHHH
Confidence 355554 37999999999976431 1 1147999999999876543 333444
Q ss_pred HHHHHhhhHhcCCCEEEEcCCCCCCC
Q 015367 131 MIQAFGPAMELGLPWAAVLGNHDQES 156 (408)
Q Consensus 131 ~~~~l~~~~~~~~p~~~v~GNHD~~~ 156 (408)
+.+.++.+ ...++++|+||||+..
T Consensus 101 ~~~~L~~l--~~~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 101 FNDWLGNL--PYEYKIVIAGNHELTF 124 (296)
T ss_dssp HHHHHHTS--CCSEEEECCCTTCGGG
T ss_pred HHHHHHhC--CCCeEEEEcCCccccc
Confidence 44444432 1245899999999864
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-12 Score=115.42 Aligned_cols=68 Identities=18% Similarity=0.190 Sum_probs=44.6
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
+.+||+++||+|.+..... ..+.+.+.+++.++|+|+++||+++ ....+.+.
T Consensus 9 ~mm~i~~iSD~H~~~~~~~-----------------~~~~l~~~~~~~~~d~ii~~GDl~~--------~~~~~~l~--- 60 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNS-----------------LPAKFKKLLVPGKIQHILCTGNLCT--------KESYDYLK--- 60 (192)
T ss_dssp --CEEEEECCCCBTTTCSS-----------------CCHHHHTTCCTTSCSEEEECSCCBS--------HHHHHHHH---
T ss_pred cceEEEEEecCCCCccchh-----------------HHHHHHHHhccCCCCEEEEcCCCCC--------HHHHHHHH---
Confidence 4689999999998643211 0134555555678999999999873 11222222
Q ss_pred hcCCCEEEEcCCCCCC
Q 015367 140 ELGLPWAAVLGNHDQE 155 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~ 155 (408)
+...|+++|+||||..
T Consensus 61 ~~~~~~~~v~GNhD~~ 76 (192)
T 1z2w_A 61 TLAGDVHIVRGDFDEN 76 (192)
T ss_dssp HHCSEEEECCCTTCCC
T ss_pred hcCCCEEEEcCCcCcc
Confidence 2356899999999975
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.3e-13 Score=126.65 Aligned_cols=203 Identities=15% Similarity=0.108 Sum_probs=111.3
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
...||++|||+|... ..++.+.+.++..++|.|+++||+++.+..+ ..+.+.+..
T Consensus 10 ~~~~i~~iSDiHg~~--------------------~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~-- 64 (270)
T 3qfm_A 10 DMTKIALLSDIHGNT--------------------TALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQ-- 64 (270)
T ss_dssp -CEEEEEECCCTTCH--------------------HHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHT--
T ss_pred cccEEEEEecCCCCH--------------------HHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHc--
Confidence 479999999999321 2345666777778999999999998765432 223333322
Q ss_pred hcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcce
Q 015367 140 ELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSI 219 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~ 219 (408)
..|+++|+||||... .+... ... ..... . ..+.
T Consensus 65 --~~~~~~v~GNhD~~~-------~~~~~---~~~-~~~~~--------------~----~~~~---------------- 97 (270)
T 3qfm_A 65 --LPITARVLGNWEDSL-------WHGVR---KEL-DSTRP--------------S----QRYL---------------- 97 (270)
T ss_dssp --SCEEEECCCHHHHHH-------HHHHT---TCS-CTTSH--------------H----HHHH----------------
T ss_pred --cCCEEEEcCChHHHH-------HHhhc---ccc-CCCcH--------------H----HHHH----------------
Confidence 237899999999631 11100 000 00000 0 0000
Q ss_pred eEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccccc
Q 015367 220 LNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQE 299 (408)
Q Consensus 220 ~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e 299 (408)
-....+ ....+++++++||++....+.- .-....++++|..+... +.....
T Consensus 98 -----~~~~~~-------~~~~L~~~~~~~L~~LP~~~~~---------~~~g~~i~lvHg~p~~~---~~~~~~----- 148 (270)
T 3qfm_A 98 -----LRQCQY-------VLEEISLEEIEVLHNQPLQIHR---------QFGDLTVGISHHLPDKN---WGRELI----- 148 (270)
T ss_dssp -----HHHHHH-------HHTTSCHHHHHHHHSCCSEEEE---------EETTEEEEEESSBTTBS---SSSTTS-----
T ss_pred -----HHHHHH-------HHHHcCHHHHHHHHhCCCceEE---------EECCcEEEEEECCCCCC---CCceec-----
Confidence 000000 1234789999999873221110 01334678999765421 101110
Q ss_pred ccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccC-CCCeEEEEeCCcCCCCCCCC----CCCCceEEEEEe
Q 015367 300 AVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGN-LNGIWFCYGGGIGYHGYGKA----GWPRRARIILAE 368 (408)
Q Consensus 300 ~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~-~~gi~~~~~~~sg~~~~~~~----~~~~g~rv~~i~ 368 (408)
+......+..+.+..++++++|||+|.. +... .+|+.++..|+.|....+.+ +...++-+++++
T Consensus 149 ----~~~~~~~l~~~~~~~~~d~~i~GHtH~~-~~~~~~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~ 217 (270)
T 3qfm_A 149 ----HTGKQEEFDRLVTHPPCDIAVYGHIHQQ-LLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFD 217 (270)
T ss_dssp ----TTCCHHHHHHTTTTTTCSEEECCSSCSE-EEEECTTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEE
T ss_pred ----CCCcHHHHHHHhcccCCCEEEECCcCch-HheeccCCEEEEECCCccCCCCCCccccCCCCCEEEEEEec
Confidence 1223344554444446999999999984 4433 47888888888886543311 123467777776
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.5e-12 Score=116.99 Aligned_cols=68 Identities=13% Similarity=0.233 Sum_probs=45.9
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
++||+++||+|.+..... ..+.+.+.+++.++|+|+++||+++ ....+.++ +
T Consensus 25 ~m~i~~iSD~H~~~~~~~-----------------l~~~l~~~~~~~~~D~vi~~GDl~~--------~~~l~~l~---~ 76 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKE-----------------LPSNFRELLATDKINYVLCTGNVCS--------QEYVEMLK---N 76 (215)
T ss_dssp CEEEEEECCCCTTTTCSS-----------------CCGGGHHHHHCTTCCEEEECSCCCC--------HHHHHHHH---H
T ss_pred CcEEEEEecCCCCCChHH-----------------HHHHHHHHHhcCCCCEEEECCCCCC--------HHHHHHHH---H
Confidence 489999999998753210 0123445556678999999999874 11222222 3
Q ss_pred cCCCEEEEcCCCCCCC
Q 015367 141 LGLPWAAVLGNHDQES 156 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~ 156 (408)
.+.|+++|+||||...
T Consensus 77 ~~~~v~~V~GNHD~~~ 92 (215)
T 2a22_A 77 ITKNVYIVSGDLDSAI 92 (215)
T ss_dssp HCSCEEECCCTTCCSC
T ss_pred cCCCEEEecCCCcCcc
Confidence 3579999999999853
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=119.62 Aligned_cols=67 Identities=21% Similarity=0.238 Sum_probs=42.9
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
+.|||+++||+|... ..++.+.+.+. ++|.|+++||+++.+... ....+.+..+
T Consensus 2 ~~mri~~isDiHg~~--------------------~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~---~~~~~~l~~~- 55 (246)
T 3rqz_A 2 NAMRILIISDVHANL--------------------VALEAVLSDAG--RVDDIWSLGDIVGYGPRP---RECVELVRVL- 55 (246)
T ss_dssp CCCCEEEECCCTTCH--------------------HHHHHHHHHHC--SCSEEEECSCCSSSSSCH---HHHHHHHHHH-
T ss_pred CCcEEEEEeecCCCH--------------------HHHHHHHHhcc--CCCEEEECCCcCCCCCCH---HHHHHHHHhc-
Confidence 369999999999311 12233444433 899999999998665422 2333333322
Q ss_pred hcCCCEEEEcCCCCCC
Q 015367 140 ELGLPWAAVLGNHDQE 155 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~ 155 (408)
+ ++++|+||||..
T Consensus 56 --~-~~~~v~GNhD~~ 68 (246)
T 3rqz_A 56 --A-PNISVIGNHDWA 68 (246)
T ss_dssp --C-SSEECCCHHHHH
T ss_pred --C-CCEEEeCchHHH
Confidence 2 369999999963
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.36 E-value=7.2e-13 Score=117.21 Aligned_cols=81 Identities=14% Similarity=0.127 Sum_probs=50.5
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH--cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA--EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
|||+++||+|++.......+ . +. ......+.+.+.+++ .+||+|+++||+++.... ...+.+.++.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~-~----~~--~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~---~~~~~~~l~~-- 69 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLN-P----EV--RFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND---KNEYLRIWKA-- 69 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHS-T----TT--CCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC---TTSHHHHHHH--
T ss_pred cEEEEEeccccCCCcccccc-C----CC--CHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchh---HHHHHHHHHH--
Confidence 78999999999865321100 0 00 001234566677766 489999999998865311 1223333333
Q ss_pred hcCCCEEEEcCCCCCC
Q 015367 140 ELGLPWAAVLGNHDQE 155 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~ 155 (408)
.+.|+++|+||||..
T Consensus 70 -l~~~~~~v~GNhD~~ 84 (195)
T 1xm7_A 70 -LPGRKILVMGNHDKD 84 (195)
T ss_dssp -SSSEEEEECCTTCCC
T ss_pred -CCCCEEEEeCCCCCc
Confidence 246899999999974
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.9e-11 Score=103.58 Aligned_cols=74 Identities=11% Similarity=-0.111 Sum_probs=48.1
Q ss_pred CeEEEecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCC
Q 015367 273 PGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHG 352 (408)
Q Consensus 273 ~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~ 352 (408)
..++++|+|+.... . ....+.+.+.+. +++++++||+|.. .....+|+.++..|+.+...
T Consensus 78 ~~i~~~Hg~~~~~~-------~-----------~~~~l~~~~~~~-~~d~vi~GHtH~~-~~~~~~~~~~inpGs~~~~~ 137 (176)
T 3ck2_A 78 TKIIQTHGHLFDIN-------F-----------NFQKLDYWAQEE-EAAICLYGHLHVP-SAWLEGKILFLNPGSISQPR 137 (176)
T ss_dssp EEEEEECSGGGTTT-------T-----------CSHHHHHHHHHT-TCSEEECCSSCCE-EEEEETTEEEEEECCSSSCC
T ss_pred eEEEEECCCccCCC-------C-----------CHHHHHHHHHhc-CCCEEEECCcCCC-CcEEECCEEEEECCCCCcCC
Confidence 36889999875311 0 112344445554 5999999999984 44556888888877766432
Q ss_pred CCCCCCCCceEEEEEe
Q 015367 353 YGKAGWPRRARIILAE 368 (408)
Q Consensus 353 ~~~~~~~~g~rv~~i~ 368 (408)
.+ ...+++.+++++
T Consensus 138 ~~--~~~~~y~il~~~ 151 (176)
T 3ck2_A 138 GT--IRECLYARVEID 151 (176)
T ss_dssp TT--CCSCCEEEEEEC
T ss_pred CC--CCCCeEEEEEEc
Confidence 22 112689999987
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-08 Score=103.61 Aligned_cols=96 Identities=18% Similarity=0.155 Sum_probs=54.9
Q ss_pred CeEEEEEeccCcCCCCc---cccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccH--HHHHHHH
Q 015367 61 TFKILQVADMHYGMGKV---TRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDV--AESMIQA 134 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~--~~~~~~~ 134 (408)
.++|+|+||+|...... ..|.. .+..+...++.+.+.+++++|| +++.+||++++...... .....+.
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~------~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ 102 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEK------TPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYF 102 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSE------EEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHH
T ss_pred eEEEEEEcccccCcccccccCcccc------cccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHH
Confidence 69999999999653321 01100 0012334556677777778898 89999998865321110 1122233
Q ss_pred HhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 135 FGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 135 l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
+. ..+.. ++++||||+..+ .+.+.++++
T Consensus 103 ln---~lg~d-~~~lGNHEfd~g--~~~l~~~l~ 130 (552)
T 2z1a_A 103 MH---RLRYR-AMALGNHEFDLG--PGPLADFLK 130 (552)
T ss_dssp HH---HTTCC-EEECCGGGGTTC--HHHHHHHHT
T ss_pred HH---hcCCC-ccccccccccCC--HHHHHHHHh
Confidence 32 33444 778999999753 444555543
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.94 E-value=6.9e-08 Score=97.91 Aligned_cols=92 Identities=21% Similarity=0.173 Sum_probs=50.9
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc----CC-CEEEEcCCcCCCCCccc--HHHHHHH
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE----KP-DFIAFTGDNIFGSSTTD--VAESMIQ 133 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~p-D~vv~~GDli~~~~~~~--~~~~~~~ 133 (408)
.++|+|+||+|........ .+.+...++.+.+.++++ +| +++|.+||++.+..... ..+...+
T Consensus 8 ~l~Il~~~D~H~~~~~~~~----------~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~ 77 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEY----------GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR 77 (516)
T ss_dssp EEEEEEECCCTTCCSCCTT----------SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHH
T ss_pred EEEEEEecccccCccCCCC----------CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHH
Confidence 5999999999976432110 011333344455544433 46 79999999875432100 0123333
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 134 AFGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
.|.. .+.. ++++||||+..+ .+.+.++.+
T Consensus 78 ~ln~---lg~d-~~~~GNHEfd~g--~~~l~~~~~ 106 (516)
T 1hp1_A 78 GMNL---VGYD-AMAIGNHEFDNP--LTVLRQQEK 106 (516)
T ss_dssp HHHH---HTCC-EEECCGGGGSSC--HHHHHHHHH
T ss_pred HHhc---cCCC-EEeeccccccCC--HHHHHHHHh
Confidence 4433 3544 779999999654 344444444
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.7e-08 Score=101.17 Aligned_cols=242 Identities=13% Similarity=0.073 Sum_probs=112.8
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccHHHH----HHHH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDVAES----MIQA 134 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~----~~~~ 134 (408)
..++|+|+||+|....... +.... -.+..+...++.+.+.+++..|+ ++|.+||++++......... -...
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~-~~~~~---~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~ 93 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTD-FTSRN---QYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPL 93 (527)
T ss_dssp CEEEEEEECCCTTCCSSCC-SSSTT---CCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHH
T ss_pred CcEEEEEEeccCCCccCcc-cccCC---CcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchH
Confidence 4699999999996543211 00000 00112344555666666667777 67789998764321110100 0122
Q ss_pred HhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCC
Q 015367 135 FGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHL 214 (408)
Q Consensus 135 l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~ 214 (408)
+..+...++. ++++||||+..+ .+.+.++.+........ .+. ... +. ...+..+..+.+.+
T Consensus 94 ~~~ln~lg~D-~~t~GNHefd~G--~~~l~~~~~~~~~p~l~---aNv--~~~--g~---p~~~~py~i~e~~G------ 154 (527)
T 3qfk_A 94 VDFYNRMAFD-FGTLGNHEFNYG--LPYLKDTLRRLNYPVLC---ANI--YEN--DS---TLTDNGVKYFQVGD------ 154 (527)
T ss_dssp HHHHHHTCCC-EECCCGGGGTTC--HHHHHHHHHHCSSCBCC---SSE--EET--TE---ESSSCSEEEEEETT------
T ss_pred HHHHHhcCCc-EEeccccccccC--HHHHHHHHHhCCCCEEE---eEe--eeC--CC---CccCCCEEEEEECC------
Confidence 2222334655 567999998644 34455555443221100 000 000 00 01111122233322
Q ss_pred CCcceeEEEEEeCCCCCCcCC-cCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCc
Q 015367 215 ANSSILNLFFLDSGDRETVRG-VRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNI 293 (408)
Q Consensus 215 ~~~~~~~~i~LDS~~~~~~~~-~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~ 293 (408)
..+.++.+.+........ ....|..-....+.+++.+++++. ....+|+++|.+......
T Consensus 155 ---~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~~----------~~D~iIvl~H~G~~~d~~------ 215 (527)
T 3qfk_A 155 ---QTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKR----------HADIIVVCYHGGFEKDLE------ 215 (527)
T ss_dssp ---EEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHHH----------HCSEEEEEEECCCSBCTT------
T ss_pred ---EEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHHh----------CCCEEEEEeCcCcccccc------
Confidence 246677777642111000 000122223345666666666652 245688888876542110
Q ss_pred ccccccccccCCCCh-HHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCC
Q 015367 294 VGQFQEAVACSRVNS-GVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGG 347 (408)
Q Consensus 294 ~g~~~e~~~~~~~~~-~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~ 347 (408)
.|...|... ..... ++.+.+ . ++|+++++||.|. ......+|+.++.++.
T Consensus 216 ~~~~~~~~~-~e~~~~~la~~~-~-~giDlIlgGHtH~-~~~~~v~~~~ivqag~ 266 (527)
T 3qfk_A 216 SGTPTEVLT-GENEGYAMLEAF-S-KDIDIFITGHQHR-QIAERFKQTAVIQPGT 266 (527)
T ss_dssp TCCBSSCCS-SSCCHHHHHHHH-G-GGCSEEECCSSCC-EEEEEETTEEEEEECS
T ss_pred cCccccccc-cchHHHHHHHhc-C-CCCcEEEECCCCc-ccceEECCEEEeccCh
Confidence 011000000 00111 233222 1 5699999999998 3444567777776643
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.1e-07 Score=97.21 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=41.3
Q ss_pred ChHHHHHHHHHHHHc--C--CC-EEEEcCCcCCCCCcccH--HHHHHHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHH
Q 015367 93 DLNTTRFLKRIIEAE--K--PD-FIAFTGDNIFGSSTTDV--AESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMY 165 (408)
Q Consensus 93 ~~~~~~~~~~~i~~~--~--pD-~vv~~GDli~~~~~~~~--~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~ 165 (408)
+...++.+.+.+++. + || ++|.+||++++...... .+...+.++ ..+++++ + ||||+..+ .+.+.+
T Consensus 103 G~arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln---~lg~d~~-~-GNHEfd~G--~~~l~~ 175 (562)
T 2wdc_A 103 GMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQN---LVGVDHM-V-SHWEWTLG--RERVEE 175 (562)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSHHHHHHTTHHHHHHHH---HHTCCEE-C-CSGGGGGC--HHHHHH
T ss_pred CHHHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcchhhhhhCCHHHHHHHH---hhCCcEE-e-cchhcccC--HHHHHH
Confidence 444555666666655 4 99 99999998865421110 022333333 3477765 7 99998543 455555
Q ss_pred HHHHc
Q 015367 166 FISLM 170 (408)
Q Consensus 166 ~~~~~ 170 (408)
+.+..
T Consensus 176 ~l~~~ 180 (562)
T 2wdc_A 176 LLGLF 180 (562)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 55543
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.77 E-value=2.9e-09 Score=94.88 Aligned_cols=77 Identities=16% Similarity=0.310 Sum_probs=49.0
Q ss_pred cccCCCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcc---c--HHH
Q 015367 55 RFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTT---D--VAE 129 (408)
Q Consensus 55 ~~~~~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~---~--~~~ 129 (408)
.|.+.+.+||+++||+|... ..++.+.+.+++.++|+|+++||+++..... . ...
T Consensus 19 ~~~~~~mmki~~iSD~H~~~--------------------~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~ 78 (208)
T 1su1_A 19 YFQSNAMMKLMFASDIHGSL--------------------PATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPA 78 (208)
T ss_dssp ------CCEEEEECCCTTBH--------------------HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHH
T ss_pred eecccccEEEEEEEcCCCCH--------------------HHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHH
Confidence 34444568999999999631 2345666777777999999999988654311 1 123
Q ss_pred HHHHHHhhhHhcCCCEEEEcCCCCC
Q 015367 130 SMIQAFGPAMELGLPWAAVLGNHDQ 154 (408)
Q Consensus 130 ~~~~~l~~~~~~~~p~~~v~GNHD~ 154 (408)
.+.+.+.. .+.|+++|+||||.
T Consensus 79 ~~~~~l~~---~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 79 KVVERLNE---VAHKVIAVRGNCDS 100 (208)
T ss_dssp HHHHHHHT---TGGGEEECCCTTCC
T ss_pred HHHHHHHh---cCCceEEEECCCch
Confidence 33444333 24689999999997
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=6e-08 Score=98.94 Aligned_cols=88 Identities=20% Similarity=0.321 Sum_probs=50.2
Q ss_pred CeEEEEEeccCcCCCCcc----ccCccccccccccCChHHHHHHHHHHHHcCC-CEEEEcCCcCCCCCcccH--HHHHHH
Q 015367 61 TFKILQVADMHYGMGKVT----RCRDVTATEFKYCSDLNTTRFLKRIIEAEKP-DFIAFTGDNIFGSSTTDV--AESMIQ 133 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p-D~vv~~GDli~~~~~~~~--~~~~~~ 133 (408)
.++|+|+||+|....... .|.. .-.+.-+...+..+.+.+++++| +++|.+||++++...... .....+
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~----~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~ 100 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVD----ASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAH 100 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSS----GGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHH
T ss_pred EEEEEEecccccCCcccccccccccc----cccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHH
Confidence 599999999996533211 1100 00011244555666677777777 599999998865421110 122233
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCC
Q 015367 134 AFGPAMELGLPWAAVLGNHDQES 156 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~ 156 (408)
.|. ..++. ++++||||+..
T Consensus 101 ~ln---~lg~d-~~~~GNHEfd~ 119 (546)
T 4h2g_A 101 FMN---ALRYD-AMALGNHEFDN 119 (546)
T ss_dssp HHH---HHTCS-EEECCGGGGTT
T ss_pred HHH---hcCCc-EEeccCccccc
Confidence 332 33655 57899999854
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=3.9e-07 Score=92.09 Aligned_cols=99 Identities=15% Similarity=0.214 Sum_probs=54.1
Q ss_pred CeEEEEEeccCcCCCCccc-cCccccccccccCChHHHHHHHHHHHHcCCCEEEE-cCCcCCCCCccc--HHHHHHHHHh
Q 015367 61 TFKILQVADMHYGMGKVTR-CRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAF-TGDNIFGSSTTD--VAESMIQAFG 136 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~-~GDli~~~~~~~--~~~~~~~~l~ 136 (408)
.++|+++||+|-....... +.+ ..-.+..+...++.+.+.+++++|+.+++ +||++.+..... ..+...+.+.
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~---~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln 82 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIA---DGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMN 82 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSG---GGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHT
T ss_pred EEEEEEEccccCCccCccccccc---CCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHH
Confidence 5999999999954332110 000 00001124455666777777789998877 999886421100 0122333332
Q ss_pred hhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 137 PAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 137 ~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
..++. ++++||||+..+ .+.+.+++.
T Consensus 83 ---~lg~D-~~tlGNHEfd~G--~~~l~~~l~ 108 (509)
T 3ive_A 83 ---TMPFD-AVTIGNHEFDHG--WDNTLLQLS 108 (509)
T ss_dssp ---TSCCS-EECCCGGGGTTC--HHHHHHHHT
T ss_pred ---hcCCc-EEeecccccccC--HHHHHHHHh
Confidence 23444 667899998654 344555443
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=3.5e-07 Score=93.85 Aligned_cols=98 Identities=14% Similarity=0.179 Sum_probs=53.7
Q ss_pred CeEEEEEeccCcCCCCcc-----ccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCccc--HHHHHH
Q 015367 61 TFKILQVADMHYGMGKVT-----RCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTD--VAESMI 132 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~--~~~~~~ 132 (408)
.++|+|++|+|....... .|.+ .-.+.-+...+..+.+.+++..|+ ++|.+||++.+..... ..+...
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~----~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~ 87 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQ----TKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADA 87 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEE----EEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcc----cccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHH
Confidence 599999999995433211 0100 000112344556666677777777 8999999886541100 012223
Q ss_pred HHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHH
Q 015367 133 QAFGPAMELGLPWAAVLGNHDQESTMDREELMYFIS 168 (408)
Q Consensus 133 ~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~ 168 (408)
+.|. ..++. ++++||||+..+ .+.+.++++
T Consensus 88 ~~ln---~lg~D-~~tlGNHEfd~G--~~~l~~~~~ 117 (579)
T 3ztv_A 88 AVMN---AGNFH-YFTLGNHEFDAG--NEGLLKLLE 117 (579)
T ss_dssp HHHH---HHTCS-EEECCSGGGTTH--HHHHHHHHT
T ss_pred HHHH---hcCcC-eeeccccccccC--HHHHHHHHH
Confidence 3332 33555 468999998543 344555544
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.55 E-value=5.2e-08 Score=84.50 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=30.0
Q ss_pred CCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEe
Q 015367 318 GDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAE 368 (408)
Q Consensus 318 ~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~ 368 (408)
.+++++++||+|.. .....+|+.+++.|+.+. +++.+++++
T Consensus 127 ~~~d~vi~GHtH~~-~~~~~~~~~~iNpGS~~~---------~sy~il~~~ 167 (178)
T 2kkn_A 127 EKPQVILFGHTHEP-EDTVKAGVRFLNPGSLAE---------GSYAVLELD 167 (178)
T ss_dssp SCCSEEECCSCSSC-CEEEETTEEEECCCCTTT---------TEEEEEEEE
T ss_pred cCCCEEEECccCCC-CeEEeCCEEEEECCCCCC---------CeEEEEEEC
Confidence 35899999999984 445567877776655442 478888887
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.49 E-value=8.1e-06 Score=77.97 Aligned_cols=102 Identities=21% Similarity=0.146 Sum_probs=54.2
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccHHHHH--------
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDVAESM-------- 131 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~-------- 131 (408)
.++|++.+|+|-...... +....+ .+..+...+..+.+.++++.|+ ++|.+||++.+..........
T Consensus 11 ~l~Il~tnD~Hg~~~~~~-~~~~~~---~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~ 86 (341)
T 3gve_A 11 HLSILATTDIHANMMDYD-YYSDKE---TADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISG 86 (341)
T ss_dssp EEEEEEECCCTTCCSSEE-TTTTEE---CSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEeccCCCccCcc-ccCCCc---cccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHHHHHhhhccccccccc
Confidence 599999999996544321 100000 0112444556666666667776 667899987543211111110
Q ss_pred ---HHHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 132 ---IQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 132 ---~~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
...+.-+...++-+ +++||||+..+ .+.+.+++..
T Consensus 87 g~~~~~~~~ln~lg~Da-~tlGNHEfd~G--~~~L~~~~~~ 124 (341)
T 3gve_A 87 TKTHPIISVMNALKYDA-GTLGNHEFNYG--LDFLDGTIKG 124 (341)
T ss_dssp SSCCHHHHHHHHTTCCB-EECCGGGGTTC--HHHHHHHHHT
T ss_pred ccccHHHHHHHhhCCCe-eeccchhhccC--HHHHHHHHHh
Confidence 01122223345554 57899998754 3445555554
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.9e-06 Score=80.05 Aligned_cols=101 Identities=22% Similarity=0.199 Sum_probs=54.2
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccHHHHHH-------
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDVAESMI------- 132 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~------- 132 (408)
.++|++.+|+|-.........+ .+ ....+...+..+.+.++++.|+ ++|..||++.+.. ...+....
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~-~~---~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~-~~~~~~~~~~~~g~~ 82 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKD-AA---TEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSP-LGDYMAAKGLKEGDV 82 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTT-EE---CSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSH-HHHHHHHHCCCTTCC
T ss_pred eEEEEEEeeCCCCcccccccCC-Cc---cccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCch-hHHhhhhcccccccc
Confidence 5899999999975433210000 00 0113445556666777777776 7789999885432 11111100
Q ss_pred -HHHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 133 -QAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 133 -~~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
..+..+...++. ++++||||+..+ .+.+.+++..
T Consensus 83 ~p~~~~mn~lg~D-~~t~GNHEfd~G--~~~l~~~~~~ 117 (339)
T 3jyf_A 83 HPVYKAMNTLNYA-VGNLGNHEFNYG--LDFLHKALAG 117 (339)
T ss_dssp CHHHHHHTTSCCS-EEECCGGGGTTC--HHHHHHHHHT
T ss_pred hHHHHHHHhcCCC-EEecchhhhhcc--HHHHHHHHHh
Confidence 112222233555 457899998654 3445555554
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=1.8e-05 Score=80.45 Aligned_cols=87 Identities=13% Similarity=0.123 Sum_probs=46.0
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH----HcCCC-EEEEcCCcCCCCCccc----HHHH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE----AEKPD-FIAFTGDNIFGSSTTD----VAES 130 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~~pD-~vv~~GDli~~~~~~~----~~~~ 130 (408)
..++|+|++|+|..........+ +. .+.--+.++.+.++ +.+|| ++|.+||++.+..... .-+.
T Consensus 14 ~~l~ILhtnD~Hg~~~~~~~~~~-----~~--~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~ 86 (557)
T 3c9f_A 14 NDINFVHTTDTHGWYSGHINQPL-----YH--ANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLK 86 (557)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGG-----GC--CCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTT
T ss_pred eEEEEEEEcccccCccCcccccc-----cc--cccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHH
Confidence 47999999999986443210000 00 01111233444443 46788 5799999885432100 0011
Q ss_pred HHHHHhhhHhcCCCEEEEcCCCCCCCC
Q 015367 131 MIQAFGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 131 ~~~~l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
..+.|. ..++. ++++||||+..+
T Consensus 87 ~~~~ln---~lg~D-a~tlGNHEfD~G 109 (557)
T 3c9f_A 87 STPIFI---KQDYD-LLTIGNHELYLW 109 (557)
T ss_dssp THHHHT---TSCCS-EECCCGGGSSSH
T ss_pred HHHHHH---hcCCC-EEeecchhcccc
Confidence 223332 33555 568899999754
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.10 E-value=5.2e-05 Score=76.94 Aligned_cols=94 Identities=17% Similarity=0.246 Sum_probs=48.0
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccH--HHHHHHHHhh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDV--AESMIQAFGP 137 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~--~~~~~~~l~~ 137 (408)
.++|+|++|+|-.-.............-.+.-+...+..+.+.+++.+|+ ++|.+||++.+...... -+...++|.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN- 81 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMN- 81 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHH-
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHh-
Confidence 38999999999543321100000000000112344455555666666776 66779998855321100 011222222
Q ss_pred hHhcCCCEEEEcCCCCCCCCC
Q 015367 138 AMELGLPWAAVLGNHDQESTM 158 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~~~ 158 (408)
..++- ++++||||+..+.
T Consensus 82 --~lgyD-a~~lGNHEFd~G~ 99 (530)
T 4h1s_A 82 --ALRYD-AMALGNHEFDNGV 99 (530)
T ss_dssp --HTTCC-EEECCGGGGTTTT
T ss_pred --ccCCC-EEEEchhhhccCH
Confidence 33555 5688999997653
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=98.07 E-value=2.1e-06 Score=79.10 Aligned_cols=65 Identities=25% Similarity=0.283 Sum_probs=42.4
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCC-CEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKP-DFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
.||+++||+|- .. ..++.+.+.+...++ |.||++||+++.+. ...+.+ +.+. .
T Consensus 19 ~~i~visDiHg-~~-------------------~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~--~~~~~l-~~l~---~ 72 (262)
T 2qjc_A 19 GRVIIVGDIHG-CR-------------------AQLEDLLRAVSFKQGSDTLVAVGDLVNKGP--DSFGVV-RLLK---R 72 (262)
T ss_dssp SCEEEECCCTT-CH-------------------HHHHHHHHHHTCCTTTSEEEECSCCSSSSS--CHHHHH-HHHH---H
T ss_pred CeEEEEeCCCC-CH-------------------HHHHHHHHHHhccCCCCEEEEecCCCCCCC--CHHHHH-HHHH---H
Confidence 49999999992 11 223445555544555 99999999987653 222322 2222 1
Q ss_pred cCCCEEEEcCCCCC
Q 015367 141 LGLPWAAVLGNHDQ 154 (408)
Q Consensus 141 ~~~p~~~v~GNHD~ 154 (408)
.++++|+||||.
T Consensus 73 --~~~~~v~GNHd~ 84 (262)
T 2qjc_A 73 --LGAYSVLGNHDA 84 (262)
T ss_dssp --HTCEECCCHHHH
T ss_pred --CCCEEEeCcChH
Confidence 379999999996
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.05 E-value=2.2e-06 Score=76.72 Aligned_cols=66 Identities=24% Similarity=0.164 Sum_probs=42.8
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH-cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
.+||+++||+|-.. ..++.+.+.+.. .++|.|+++||+++.+.. ..+ .+..+
T Consensus 12 ~~~i~visDiHg~~--------------------~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~--~~~----~~~~l- 64 (221)
T 1g5b_A 12 YRNIWVVGDLHGCY--------------------TNLMNKLDTIGFDNKKDLLISVGDLVDRGAE--NVE----CLELI- 64 (221)
T ss_dssp CSCEEEECCCTTCH--------------------HHHHHHHHHHTCCTTTCEEEECSCCSSSSSC--HHH----HHGGG-
T ss_pred CceEEEEEcCCCCH--------------------HHHHHHHHHccCCCCCCEEEEeCCccCCCCC--hHH----HHHHH-
Confidence 58999999999311 123344444433 368999999999876532 222 22222
Q ss_pred hcCCCEEEEcCCCCC
Q 015367 140 ELGLPWAAVLGNHDQ 154 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~ 154 (408)
. ..++++|.||||.
T Consensus 65 ~-~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 65 T-FPWFRAVRGNHEQ 78 (221)
T ss_dssp G-STTEEECCCHHHH
T ss_pred h-cCCEEEEccCcHH
Confidence 2 3589999999996
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.86 E-value=3.8e-06 Score=78.02 Aligned_cols=68 Identities=24% Similarity=0.264 Sum_probs=42.7
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH-cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
|||+++||+|... ..++.+.+.+.. .++|.+|++||+++.+. ...+.+ +.+..
T Consensus 1 M~i~vigDiHG~~--------------------~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~--~s~~~l-~~l~~--- 54 (280)
T 2dfj_A 1 MATYLIGDVHGCY--------------------DELIALLHKVEFTPGKDTLWLTGDLVARGP--GSLDVL-RYVKS--- 54 (280)
T ss_dssp -CEEEECCCCSCH--------------------HHHHHHHHHTTCCTTTCEEEECSCCSSSSS--CHHHHH-HHHHH---
T ss_pred CeEEEEecCCCCH--------------------HHHHHHHHHhCCCCCCCEEEEeCCcCCCCC--ccHHHH-HHHHh---
Confidence 5799999999421 123344444433 46899999999997654 222322 22222
Q ss_pred cCCCEEEEcCCCCCC
Q 015367 141 LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~ 155 (408)
.+.++++|.||||..
T Consensus 55 l~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 55 LGDSVRLVLGNHDLH 69 (280)
T ss_dssp TGGGEEECCCHHHHH
T ss_pred CCCceEEEECCCcHH
Confidence 234799999999963
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00087 Score=61.74 Aligned_cols=73 Identities=15% Similarity=0.177 Sum_probs=44.2
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH-HcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE-AEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
.+||++++|+|-... ...++...+.+. +.++|++++.||.+.++.... ....+. +.
T Consensus 4 ~m~ilf~GDv~G~~G------------------~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~--~~~~~~---ln 60 (281)
T 1t71_A 4 SIKFIFLGDVYGKAG------------------RNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS--LKHYEF---LK 60 (281)
T ss_dssp CCEEEEECEEBHHHH------------------HHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC--HHHHHH---HH
T ss_pred eEEEEEECCcCChHH------------------HHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcC--HHHHHH---HH
Confidence 599999999993311 122233333333 347899999999776553221 222222 33
Q ss_pred hcCCCEEEEcCCCCCCCC
Q 015367 140 ELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~ 157 (408)
..++.+. +.|||++...
T Consensus 61 ~~G~Da~-TlGNHefD~g 77 (281)
T 1t71_A 61 EAGVNYI-TMGNHTWFQK 77 (281)
T ss_dssp HHTCCEE-ECCTTTTCCG
T ss_pred hcCCCEE-EEccCcccCC
Confidence 4577765 6699999765
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.57 E-value=5.6e-05 Score=70.93 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=45.0
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhh-Hh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPA-ME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~-~~ 140 (408)
.+|++++|+|-.. ..+..+.+.+....++.++++||+++.+.. ..+.+.- +..+ ..
T Consensus 50 ~~i~viGDIHG~~--------------------~~L~~ll~~~~~~~~~~~vflGD~VDRG~~--s~evl~l-L~~lk~~ 106 (309)
T 2ie4_C 50 CPVTVCGDVHGQF--------------------HDLMELFRIGGKSPDTNYLFMGDYVDRGYY--SVETVTL-LVALKVR 106 (309)
T ss_dssp SSEEEECCCTTCH--------------------HHHHHHHHHHCCTTTSCEEECSCCSSSSTT--HHHHHHH-HHHHHHH
T ss_pred CCEEEEecCCCCH--------------------HHHHHHHHHcCCCCCCEEEEeCCccCCCCC--hHHHHHH-HHHHHhh
Confidence 6799999999321 122334444434467889999999977643 3333322 2222 22
Q ss_pred cCCCEEEEcCCCCCCC
Q 015367 141 LGLPWAAVLGNHDQES 156 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~ 156 (408)
.+-.++++.||||...
T Consensus 107 ~p~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 107 YRERITILRGNHESRQ 122 (309)
T ss_dssp CTTTEEECCCTTSSTT
T ss_pred CCCcEEEEeCCCCHHH
Confidence 3456999999999853
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.53 E-value=7.4e-05 Score=71.39 Aligned_cols=73 Identities=21% Similarity=0.196 Sum_probs=44.3
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc--------CCCEEEEcCCcCCCCCcccHHHHH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE--------KPDFIAFTGDNIFGSSTTDVAESM 131 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~pD~vv~~GDli~~~~~~~~~~~~ 131 (408)
..+||+++||+|-.. ..+..+.+.+... ++|.+|++||+++.+.. ..+.+
T Consensus 69 ~~~~i~vigDiHG~~--------------------~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~--s~evl 126 (342)
T 2z72_A 69 GIKKVVALSDVHGQY--------------------DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQ--VNEVL 126 (342)
T ss_dssp CCCEEEEECCCTTCH--------------------HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSC--HHHHH
T ss_pred CCCCEEEEECCCCCH--------------------HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCC--HHHHH
Confidence 358999999999321 1122333332211 47999999999976643 22222
Q ss_pred HHHHhhhH----hcCCCEEEEcCCCCCC
Q 015367 132 IQAFGPAM----ELGLPWAAVLGNHDQE 155 (408)
Q Consensus 132 ~~~l~~~~----~~~~p~~~v~GNHD~~ 155 (408)
..+..+. ..+.+++++.||||..
T Consensus 127 -~~l~~l~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 127 -WFMYQLDQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp -HHHHHHHHHHHHTTCEEEECCCHHHHH
T ss_pred -HHHHHHHHHHhhCCCeEEEEecCCcHH
Confidence 2222221 3456799999999973
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.49 E-value=8.4e-05 Score=70.29 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=44.5
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
.+|.+++|+|-.. ..+..+.+.+.....|-+|++||+|+.+. ...+.+.-++.--...
T Consensus 57 ~~i~viGDIHG~~--------------------~~L~~ll~~~g~~~~~~~vflGD~VDRG~--~s~evl~lL~~lk~~~ 114 (330)
T 1fjm_A 57 APLKICGDIHGQY--------------------YDLLRLFEYGGFPPESNYLFLGDYVDRGK--QSLETICLLLAYKIKY 114 (330)
T ss_dssp SSEEEECBCTTCH--------------------HHHHHHHHHHCSTTSSCEEECSCCSSSSS--CHHHHHHHHHHHHHHS
T ss_pred CceEEecCCCCCH--------------------HHHHHHHHHhCCCCcceEEeCCCcCCCCC--ChHHHHHHHHHhhhhc
Confidence 5799999999432 12233444443345688999999998764 3333333222211233
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
+-.++++.||||..
T Consensus 115 p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 115 PENFFLLRGNHECA 128 (330)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCceEEecCCchHh
Confidence 55699999999974
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00031 Score=65.33 Aligned_cols=72 Identities=14% Similarity=0.046 Sum_probs=44.6
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
.+|++++|+|-... .+..+.+.+.....+.+|++||+++.+.. ..+.+.-.+.-....
T Consensus 56 ~~i~viGDIHG~~~--------------------~L~~ll~~~g~~~~~~~vfLGD~VDrG~~--s~evl~lL~~lk~~~ 113 (299)
T 3e7a_A 56 APLKICGDIHGQYY--------------------DLLRLFEYGGFPPESNYLFLGDYVDRGKQ--SLETICLLLAYKIKY 113 (299)
T ss_dssp SSEEEECBCTTCHH--------------------HHHHHHHHHCSTTSSCEEECSCCSSSSSC--HHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCCHH--------------------HHHHHHHHhCCCCCccEEeCCcccCCCCC--cHHHHHHHHHHHhhC
Confidence 46999999995421 22334444333456889999999987653 333333222211234
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
+-.++.+.||||..
T Consensus 114 p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 114 PENFFLLRGNHECA 127 (299)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCcEEEEecCchhh
Confidence 55699999999974
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0068 Score=54.79 Aligned_cols=81 Identities=19% Similarity=0.240 Sum_probs=46.8
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|||+++.|+=-.. +...++.+.+.+.+.. |++++-|.-..++.... ....+. +...
T Consensus 1 m~ilfiGDi~g~~------------------G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~~~~~~---l~~~ 56 (252)
T 2z06_A 1 MRVLFIGDVMAEP------------------GLRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--RRSYRL---LREA 56 (252)
T ss_dssp CEEEEECCBCHHH------------------HHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--HHHHHH---HHHH
T ss_pred CEEEEEEecCCcc------------------cHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--HHHHHH---HHhC
Confidence 6899999983221 1123344555555556 98877766554443221 222222 3455
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHcc
Q 015367 142 GLPWAAVLGNHDQESTMDREELMYFISLMD 171 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~ 171 (408)
++.++ +.|||++... ++.++....+
T Consensus 57 G~D~~-T~GNHefD~~----~l~~~l~~~~ 81 (252)
T 2z06_A 57 GVDLV-SLGNHAWDHK----EVYALLESEP 81 (252)
T ss_dssp TCCEE-ECCTTTTSCT----THHHHHHHSS
T ss_pred CCCEE-EeccEeeECc----hHHHHhccCC
Confidence 88876 7799999764 3556665443
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00027 Score=66.82 Aligned_cols=74 Identities=20% Similarity=0.124 Sum_probs=44.2
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCC-CEEEEcCCcCCCCCcccHHHHHHHHHhhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKP-DFIAFTGDNIFGSSTTDVAESMIQAFGPA 138 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~ 138 (408)
..+||++++|+|-... .+..+.+.+..... +.+|++||+++.+.. ..+.+.-++.--
T Consensus 62 ~~~ri~viGDIHG~~~--------------------~L~~ll~~~g~~~~~~~~vflGD~VDRG~~--s~evl~lL~~lk 119 (335)
T 3icf_A 62 PDVKISVCGDTHGQFY--------------------DVLNLFRKFGKVGPKHTYLFNGDFVDRGSW--SCEVALLFYCLK 119 (335)
T ss_dssp TTCEEEEECCCTTCHH--------------------HHHHHHHHHCCCBTTEEEEECSCCSSSSTT--HHHHHHHHHHHH
T ss_pred cCceEEEEecCCCCHH--------------------HHHHHHHHcCCCCCCcEEEEeCCccCCCcC--hHHHHHHHHHHh
Confidence 3689999999995421 12233333322223 469999999987643 333333222211
Q ss_pred HhcCCCEEEEcCCCCCC
Q 015367 139 MELGLPWAAVLGNHDQE 155 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~ 155 (408)
...+-.++.+.||||..
T Consensus 120 ~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 120 ILHPNNFFLNRGNHESD 136 (335)
T ss_dssp HHCTTTEEECCCTTSSH
T ss_pred hhCCCcEEEecCchhhh
Confidence 23455699999999964
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00028 Score=66.18 Aligned_cols=70 Identities=26% Similarity=0.270 Sum_probs=42.8
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH---c-CCCEEEEcCCcCCCCCcccHHHHHHHHHh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA---E-KPDFIAFTGDNIFGSSTTDVAESMIQAFG 136 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~-~pD~vv~~GDli~~~~~~~~~~~~~~~l~ 136 (408)
..||++++|+|-.. ..+.++++. . ..+.+|++||+++.+.. ..+.+.-.+.
T Consensus 59 ~~ri~viGDIHG~~-----------------------~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~--s~evl~lL~~ 113 (315)
T 3h63_A 59 TEKITVCGDTHGQF-----------------------YDLLNIFELNGLPSETNPYIFNGDFVDRGSF--SVEVILTLFG 113 (315)
T ss_dssp TCEEEEECCCTTCH-----------------------HHHHHHHHHHCCCBTTBCEEEESCCSSSSTT--HHHHHHHHHH
T ss_pred CceEEEEecCCCCH-----------------------HHHHHHHHHhCCCCCCCEEEEeCCccCCCcC--hHHHHHHHHH
Confidence 58999999999432 123333332 2 23469999999987643 3333332222
Q ss_pred hhHhcCCCEEEEcCCCCCC
Q 015367 137 PAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 137 ~~~~~~~p~~~v~GNHD~~ 155 (408)
-....+-.++.+.||||..
T Consensus 114 lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 114 FKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp HHHHSTTTEEEECCTTSSH
T ss_pred hhhhcCCcEEEEecCcccc
Confidence 1123355699999999964
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00029 Score=70.42 Aligned_cols=73 Identities=21% Similarity=0.193 Sum_probs=44.3
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcC-CCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEK-PDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
.+||++++|+|-.. ..+..+.+.+.... .|.+|++||+++.+.. ..+.+.-.+.-..
T Consensus 212 ~~~~~vigDiHG~~--------------------~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~--s~e~~~~l~~l~~ 269 (477)
T 1wao_1 212 TEKITVCGDTHGQF--------------------YDLLNIFELNGLPSETNPYIFNGDFVDRGSF--SVEVILTLFGFKL 269 (477)
T ss_dssp SCEEEEECBCTTCH--------------------HHHHHHHHHHCCCBTTBCEEEESCCSSSSTT--HHHHHHHHHHHHH
T ss_pred CcceEEEeCCCCCH--------------------HHHHHHHHHcCCCCCcCeEEEeccccCCCcc--hHHHHHHHHHHHh
Confidence 58999999999321 11223333332222 3579999999977642 3333333222113
Q ss_pred hcCCCEEEEcCCCCCC
Q 015367 140 ELGLPWAAVLGNHDQE 155 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~ 155 (408)
..+..++.+.||||..
T Consensus 270 ~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 270 LYPDHFHLLRGNHETD 285 (477)
T ss_dssp HSTTTEEEECCTTSSH
T ss_pred hCCCceEeecCCccHH
Confidence 4467899999999963
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00033 Score=66.56 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=44.6
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
.+|++++|+|-... .+..+.+.......|.++++||+++.+.. ..+.+.-.+.--...
T Consensus 70 ~pi~ViGDIHG~~~--------------------dL~~ll~~~g~~~~~~~vfLGD~VDRG~~--s~Evl~lL~~lk~~~ 127 (357)
T 3ll8_A 70 APVTVCGDIHGQFF--------------------DLMKLFEVGGSPANTRYLFLGDYVDRGYF--SIECVLYLWALKILY 127 (357)
T ss_dssp SSEEEECCCTTCHH--------------------HHHHHHHHHCCTTTCCEEECSCCSSSSTT--HHHHHHHHHHHHHHC
T ss_pred ccceeeccCCCCHH--------------------HHHHHHHhcCCCCCcEEEECCCccCCCcC--hHHHHHHHHHhhhhc
Confidence 46999999995421 12334443334566899999999987643 333333222211234
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
+-.++.+.||||..
T Consensus 128 p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 128 PKTLFLLRGNHECR 141 (357)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCcEEEEeCchhhh
Confidence 55699999999974
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0015 Score=64.28 Aligned_cols=83 Identities=16% Similarity=0.218 Sum_probs=55.0
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHH-----------HcCCCEEEEcCCcCCCCCc-c--
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE-----------AEKPDFIAFTGDNIFGSST-T-- 125 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----------~~~pD~vv~~GDli~~~~~-~-- 125 (408)
...+|+++||+|+|..... ....++.+.+.+. +.+...+|++||+++.-.. .
T Consensus 199 ~~~~ialVSGL~igs~~~~--------------~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~ 264 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGE--------------SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDS 264 (476)
T ss_dssp SCCEEEEECCCCBTSSCHH--------------HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------
T ss_pred CCCEEEEECCcccCCCccc--------------chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchh
Confidence 4679999999999976311 0123455656554 2467899999999976421 0
Q ss_pred ----------------cHHHHHHHHHhhhHhcCCCEEEEcCCCCCCCC
Q 015367 126 ----------------DVAESMIQAFGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 126 ----------------~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
+.++.+.+.|.. +...+|+...|||||-...
T Consensus 265 ~~~~~y~~~~~~~~~~~~~~~ld~~L~~-l~~~i~V~lmPG~~DP~~~ 311 (476)
T 3e0j_A 265 INKAKYLTKKTQAASVEAVKMLDEILLQ-LSASVPVDVMPGEFDPTNY 311 (476)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHH-HHTTSCEEEECCTTSSSCS
T ss_pred hhhhhccccccchhhHHHHHHHHHHHHh-cccCceEEecCCCCCcccc
Confidence 123445555555 3568999999999998643
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00063 Score=67.45 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=43.0
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
.+|++++|+|-... .+..+.+.......|.+|++||+++.+.. ..+.+.-++.--...
T Consensus 83 ~pI~VIGDIHGq~~--------------------dL~~LL~~~g~p~~d~yVFLGDyVDRGp~--S~Evl~lL~aLk~~~ 140 (521)
T 1aui_A 83 APVTVCGDIHGQFF--------------------DLMKLFEVGGSPANTRYLFLGDYVDRGYF--SIECVLYLWALKILY 140 (521)
T ss_dssp SSEEEECCCTTCHH--------------------HHHHHHHHHCCTTTCCEEECSCCSSSSSC--HHHHHHHHHHHHHHS
T ss_pred cceeeccCCCCCHH--------------------HHHHHHHhcCCCCcceEEEcCCcCCCCCC--HHHHHHHHHHHhhhC
Confidence 57999999994321 12333332212345899999999987643 333333222211233
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
+-.++.+.||||..
T Consensus 141 P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 141 PKTLFLLRGNHECR 154 (521)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCeEEEecCCccHH
Confidence 45699999999974
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.02 Score=51.90 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=47.0
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|||+++.|+= |.. +...++.+.+.+.+.. |++++.|+.+.++.... ....+. +...
T Consensus 1 m~ilf~GDv~-g~~-----------------G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~--~~~~~~---l~~~ 56 (255)
T 1t70_A 1 MRVLFIGDVF-GQP-----------------GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH--RDAARG---ALEA 56 (255)
T ss_dssp CEEEEECCBB-HHH-----------------HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC--HHHHHH---HHHH
T ss_pred CEEEEEeccC-ChH-----------------HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC--HHHHHH---HHhC
Confidence 6899999995 211 1123344455555555 99988888675553221 122222 3455
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHcc
Q 015367 142 GLPWAAVLGNHDQESTMDREELMYFISLMD 171 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~ 171 (408)
++.++ +.|||++... ++.++....+
T Consensus 57 G~Da~-TlGNHefD~~----~l~~~l~~~~ 81 (255)
T 1t70_A 57 GAGCL-TLGNHAWHHK----DIYPMLSEDT 81 (255)
T ss_dssp TCSEE-ECCTTTTSST----THHHHHHTTC
T ss_pred CCCEE-EeccccccCc----hHHHHHhhCC
Confidence 77766 5599999753 4556655443
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.73 E-value=0.072 Score=52.18 Aligned_cols=82 Identities=15% Similarity=0.213 Sum_probs=54.3
Q ss_pred CCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHc-CCCEEEEcCCcCCCCCc-------------
Q 015367 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAE-KPDFIAFTGDNIFGSST------------- 124 (408)
Q Consensus 59 ~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~pD~vv~~GDli~~~~~------------- 124 (408)
+.+++|++.|..+.....- +.+.+..+.+.+++. +||.+|++|.++|....
T Consensus 145 ~~~l~ivvAsGPyT~sdnl---------------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~ 209 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNF---------------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 209 (460)
T ss_dssp SSCEEEEEEESCCSCSSCC---------------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTC
T ss_pred CCCcEEEEEeCCccCCCcc---------------ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccc
Confidence 3579999999999776532 123445566666554 89999999999876531
Q ss_pred ---ccH-HHHHHHHHhhhHh---cCCCEEEEcCCCCCC
Q 015367 125 ---TDV-AESMIQAFGPAME---LGLPWAAVLGNHDQE 155 (408)
Q Consensus 125 ---~~~-~~~~~~~l~~~~~---~~~p~~~v~GNHD~~ 155 (408)
... .+.|.+.+.+.++ ..+-++.|||+||..
T Consensus 210 ~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 210 KTQPKTLDELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp SSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred cccccCHHHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 111 2334444443332 346699999999985
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=87.17 E-value=0.48 Score=40.13 Aligned_cols=65 Identities=15% Similarity=0.048 Sum_probs=40.7
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
.+||+++||+|....... ++.+.+.+. .++|+|+++||+++. ...+.+. +
T Consensus 22 mmri~~iSD~Hg~~~~~~------------------l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~---~ 71 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMAS------------------LPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLE---K 71 (178)
T ss_dssp CEEEEEECCCCBTTTTCC------------------CCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHH---H
T ss_pred ceEEEEEecccCCCCHHH------------------HHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHH---h
Confidence 589999999994222110 011222222 689999999998741 2222232 2
Q ss_pred cCCCEEEEcCCCCCC
Q 015367 141 LGLPWAAVLGNHDQE 155 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~ 155 (408)
...|+++|+||||..
T Consensus 72 ~~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 72 FSKEFYGVHGNMDYP 86 (178)
T ss_dssp HTSSEEECCCSSSCG
T ss_pred cCCCEEEEECCCCcH
Confidence 247999999999974
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 408 | ||||
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 4e-17 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 2e-09 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 8e-08 | |
| d1ii7a_ | 333 | d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus | 1e-05 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 4e-05 | |
| d3c9fa2 | 322 | d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sug | 2e-04 |
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 79.4 bits (194), Expect = 4e-17
Identities = 39/290 (13%), Positives = 72/290 (24%), Gaps = 18/290 (6%)
Query: 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDN 118
D F +AD+ Y + + Y + R E+ + GD
Sbjct: 1 DPVFTFGLIADVQYADIE-DGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDI 59
Query: 119 IFGSSTTD--VAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQ 176
I G + ++ + V GNH+ + L ++ +
Sbjct: 60 IDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTD 119
Query: 177 VNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFLDSGDRETVRGV 236
A F D G + + + + + ++ +
Sbjct: 120 TGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDL 179
Query: 237 RTYGYIKESQLRWLHR----VSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQN 292
+ R++ + LQ Q L F H+P+
Sbjct: 180 NLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICL 239
Query: 293 IVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWF 342
VL L S + GHDH C + +G
Sbjct: 240 AWNHEA-----------VLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQH 278
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 56.0 bits (133), Expect = 2e-09
Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 16/119 (13%)
Query: 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-----EKPDFIA 113
+ +L ++D H G V + L ++E +PD I
Sbjct: 2 RPDYVLLHISDTHLIGGDRRLYGAV-----------DADDRLGELLEQLNQSGLRPDAIV 50
Query: 114 FTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDY 172
FTGD + A +LG V+GNHD + + + L S+
Sbjct: 51 FTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPL 109
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 50.9 bits (120), Expect = 8e-08
Identities = 49/337 (14%), Positives = 87/337 (25%), Gaps = 70/337 (20%)
Query: 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDN 118
+ + V D F ++ + + ++ DFI GDN
Sbjct: 2 TPILRFVAVGDWGGV----------PNAPFHTAREMANAKAIATTVKTLGADFILSLGDN 51
Query: 119 IFGSSTTDVAESMIQA-----FGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYS 173
+ + D + Q F +PW + GNHD + +
Sbjct: 52 FYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSA----------QIA 101
Query: 174 VAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILN---LFFLDSGDR 230
++++ PS Y LR P + +L+ L
Sbjct: 102 YSKISKRWNFPSP--------------YYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFV 147
Query: 231 ETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYY 290
+ +QL W+ + A + +A +
Sbjct: 148 SQQPERPRNLALARTQLAWIKKQLAAAKEDYVL-----------VAGHYPVWSIAEHGPT 196
Query: 291 QNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGY 350
+V Q + +V A GHDH + + NG+ F G +
Sbjct: 197 HCLVKQLLPLLTTHKV--------------TAYLCGHDHNLQYLQDENGLGFVLSGAGNF 242
Query: 351 HGYGKA---GWPRRARIILAEAGKGENGWMEVEMIKT 384
K P A G+ VE+
Sbjct: 243 MDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPK 279
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 44.7 bits (104), Expect = 1e-05
Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 17/154 (11%)
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIE---AEKPDFIAFTGDNI 119
K +AD+H G + + + K +E E DFI GD +
Sbjct: 2 KFAHLADIHLGYEQFHKPQREEEFA----------EAFKNALEIAVQENVDFILIAGD-L 50
Query: 120 FGSSTTDVA--ESMIQAFGPAMELGLPWAAVLGNHDQESTMDRE-ELMYFISLMDYSVAQ 176
F SS + I E +P A+ GNHD+ L+ L+ +
Sbjct: 51 FHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGPSVLNLLEDFGLVYVIGMR 110
Query: 177 VNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPP 210
+ + G E + DL ++G
Sbjct: 111 KEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMK 144
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 42.8 bits (99), Expect = 4e-05
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 20/115 (17%)
Query: 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-----EKPDFIAFTGD 117
+ ++D H+ + + ++ E+PD + +GD
Sbjct: 2 LLAHISDTHFRSRGEKLYGFI-----------DVNAANADVVSQLNALRERPDAVVVSGD 50
Query: 118 NIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDY 172
+ + A L P + GNHD ++ L
Sbjct: 51 IVNCGRPEE----YQVARQILGSLNYPLYLIPGNHDDKALFLEYLQPLCPQLGSD 101
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Score = 40.9 bits (95), Expect = 2e-04
Identities = 26/181 (14%), Positives = 47/181 (25%), Gaps = 12/181 (6%)
Query: 52 LPLRFRYDGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDF 111
P R + D H A + S T ++RI + D
Sbjct: 2 FPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFIS---FTTHMRRIAHSRNQDL 58
Query: 112 IAF-TGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLM 170
+ +GD G+ +D+ P +GNH E + + +++
Sbjct: 59 LLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQDYDLLTIGNH--ELYLWENSKQEYETVV 116
Query: 171 D-----YSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSILNLFFL 225
+ Y + V+ D G+ K +RV
Sbjct: 117 NHFQDKYVCSNVD-IRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVT 175
Query: 226 D 226
Sbjct: 176 P 176
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 408 | |||
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.96 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.96 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.94 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 99.91 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.89 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.78 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.77 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.68 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.45 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.33 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.28 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.23 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.96 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.58 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.47 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.25 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.07 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.91 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.63 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 94.58 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 94.28 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 93.58 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 93.04 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 89.25 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 88.12 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 85.31 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 84.77 |
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=1.6e-28 Score=225.61 Aligned_cols=233 Identities=19% Similarity=0.196 Sum_probs=145.6
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH--cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA--EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPA 138 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 138 (408)
.|||+||||+|+........+. ....+.++.+.+.+++ .+||+||++||+++.+ .++.++.+.+.+.++
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~--------~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g-~~~~~~~~~~~l~~~ 74 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGA--------VDADDRLGELLEQLNQSGLRPDAIVFTGDLADKG-EPAAYRKLRGLVEPF 74 (256)
T ss_dssp SEEEEEECCCCBC------------------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSC-CHHHHHHHHHHHHHH
T ss_pred CEEEEEEeeCccCCCCcccccC--------cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-ChhHHHHHHHHhhhh
Confidence 6999999999997654221100 0112334445555554 4799999999988654 345566777777655
Q ss_pred H-hcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCc
Q 015367 139 M-ELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANS 217 (408)
Q Consensus 139 ~-~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~ 217 (408)
. ..++|+++|+||||.. ..+. +.+.... ...+.-+|.+.+.
T Consensus 75 ~~~~~~p~~~v~GNHD~~-----~~~~---~~~~~~~--------------------~~~~~~~~~~~~~---------- 116 (256)
T d2hy1a1 75 AAQLGAELVWVMGNHDDR-----AELR---KFLLDEA--------------------PSMAPLDRVCMID---------- 116 (256)
T ss_dssp HHHHTCEEEECCCTTSCH-----HHHH---HHTTCCC--------------------CCCSCCCEEEEET----------
T ss_pred hhhcCCCEEEEcccccch-----hhhh---hhhcccc--------------------ccccccceEEEec----------
Confidence 4 4589999999999952 2222 2121110 1112224555443
Q ss_pred ceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccc
Q 015367 218 SILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQF 297 (408)
Q Consensus 218 ~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~ 297 (408)
.+++++|||..... ..|.+.++|++||++.|++. +.+++||++|||+......+....
T Consensus 117 -~~~~~~ldt~~~~~-----~~g~~~~~~~~wl~~~L~~~------------~~~~~iv~~Hhpp~~~~~~~~~~~---- 174 (256)
T d2hy1a1 117 -GLRIIVLDTSVPGH-----HHGEIRASQLGWLAEELATP------------APDGTILALHHPPIPSVLDMAVTV---- 174 (256)
T ss_dssp -TEEEEECCCBCTTC-----SSBCCCHHHHHHHHHHHTSC------------CTTCEEEECSSCSSCCSSHHHHTT----
T ss_pred -ccceeeeeeeecCC-----cCCcccHHHHHHHHHHHHhh------------hccCceeeeecCCccccccccccc----
Confidence 36799999964321 34678999999999987543 467899999999876433222111
Q ss_pred ccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCC-----C-C--CCCCCceEEEEEec
Q 015367 298 QEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGY-----G-K--AGWPRRARIILAEA 369 (408)
Q Consensus 298 ~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~-----~-~--~~~~~g~rv~~i~~ 369 (408)
...++..+..+.+.++|+++||||+|. .....++|+.++.+|++++... + . ...++|+++++++.
T Consensus 175 ------~~~~~~~~~~i~~~~~v~~~~~GH~H~-~~~~~~~gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~ 247 (256)
T d2hy1a1 175 ------ELRDQAALGRVLRGTDVRAILAGHLHY-STNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYP 247 (256)
T ss_dssp ------SBCCHHHHHHHHTTSSEEEEEECSSSS-CEEEEETTEEEEECCCCC-------------------CEEEEEECS
T ss_pred ------ccccHHHHHHHHhccCceEEEccccch-hhceEECCEEEEEcCCccccccccCCCCCcccccCCCCEEEEEEEC
Confidence 134565666666667899999999998 5667889999999998876311 1 0 13357899999974
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.96 E-value=1.5e-27 Score=221.20 Aligned_cols=232 Identities=17% Similarity=0.214 Sum_probs=148.4
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH--cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA--EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAM 139 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 139 (408)
|||+||||+|++.......+. ......++.+.+.+++ .+||+||++||+++.. ..+.++.+.+.+++
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~--------~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~-~~~~y~~~~~~l~~-- 69 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGF--------IDVNAANADVVSQLNALRERPDAVVVSGDIVNCG-RPEEYQVARQILGS-- 69 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTT--------BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC-CHHHHHHHHHHHTT--
T ss_pred CEEEEEecCcCCCCccccccC--------cCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCC-cchhHHHHHHHHhc--
Confidence 799999999998654321110 0011223444455543 4899999999988654 34556666666554
Q ss_pred hcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCcce
Q 015367 140 ELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSI 219 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~ 219 (408)
.++|+++|+||||.. ....++..... ..... ......|.+.. ..
T Consensus 70 -l~~p~~~i~GNHD~~-----~~~~~~~~~~~---~~~~~----------------~~~~~~~~~~~-----------~~ 113 (271)
T d3d03a1 70 -LNYPLYLIPGNHDDK-----ALFLEYLQPLC---PQLGS----------------DANNMRCAVDD-----------FA 113 (271)
T ss_dssp -CSSCEEEECCTTSCH-----HHHHHHHGGGS---GGGCS----------------CGGGCCEEECS-----------SS
T ss_pred -cCCCEEEEecCccch-----HHHHHHhhhhh---hcccc----------------ccCcceEEEec-----------CC
Confidence 489999999999973 22222222111 01100 00111333322 23
Q ss_pred eEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccccc
Q 015367 220 LNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQE 299 (408)
Q Consensus 220 ~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e 299 (408)
+++++|||..... ..++++++|++||+++|++. +.++++|++|||+......+.+...
T Consensus 114 ~~~i~ldt~~~~~-----~~~~l~~~ql~wL~~~L~~~------------~~~~~iv~~Hh~p~~~~~~~~d~~~----- 171 (271)
T d3d03a1 114 TRLLFIDSSRAGT-----SKGWLTDETISWLEAQLFEG------------GDKPATIFMHHPPLPLGNAQMDPIA----- 171 (271)
T ss_dssp SEEEECCCCCTTC-----SSBCCCHHHHHHHHHHHHHH------------TTSCEEEEESSCSSCCSCTTTGGGS-----
T ss_pred eEEEecccccCCC-----CcceecHHHHHHHHHHHhhh------------ccceeEEEeccCccccCcccccccc-----
Confidence 6799999964321 34679999999999998875 4678999999998765443322211
Q ss_pred ccccCCCC-hHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCC-CCC-------CCCCCceEEEEEe
Q 015367 300 AVACSRVN-SGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHG-YGK-------AGWPRRARIILAE 368 (408)
Q Consensus 300 ~~~~~~~~-~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~-~~~-------~~~~~g~rv~~i~ 368 (408)
..+ .++++.|.++++|+++||||+|. .....++|++++.+|++++.- .+. .-.++|+++....
T Consensus 172 -----~~~~~~l~~~l~~~~~v~~vl~GH~H~-~~~~~~~g~~~~~~pst~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 243 (271)
T d3d03a1 172 -----CENGHRLLALVERFPSLTRIFCGHNHS-LTMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQV 243 (271)
T ss_dssp -----BTTTHHHHHHHHHCTTEEEEEECSSSS-CEEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEE
T ss_pred -----ccchHHHHHHHHhcCCeEEEEeCCcch-hhceEECCEEEEEcCCceeecccCCCCCCcccccCCCEEEEEEEe
Confidence 223 47888888888899999999998 566789999999999887531 110 0124588887765
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.94 E-value=4e-26 Score=213.20 Aligned_cols=256 Identities=18% Similarity=0.126 Sum_probs=149.4
Q ss_pred CeEEEEEeccCcCCCCccc-cCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCc--ccHHHHHHHHHhh
Q 015367 61 TFKILQVADMHYGMGKVTR-CRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSST--TDVAESMIQAFGP 137 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~--~~~~~~~~~~l~~ 137 (408)
-|||++|||+|++...... ........+. .....++.+.+.+++.+||+||++||+++.... ....+.+.+.++.
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~--~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~ 80 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYR--GSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 80 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTT--HHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhH--HHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHH
Confidence 4999999999998643211 0001111000 112334555566778999999999999875432 1233445555555
Q ss_pred hHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCcc---ceEEEeeCCCCCCC
Q 015367 138 AMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFG---NYDLRVYGPPGSHL 214 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~---~y~~~v~~~~~~~~ 214 (408)
+...++|+++++||||............ ............. ....+.. .+....
T Consensus 81 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~----~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~-------- 137 (320)
T d2nxfa1 81 LDACSVDVHHVWGNHEFYNFSRPSLLSS----RLNSAQRTGTDTG-----------SDLIGDDIYAYEFSPA-------- 137 (320)
T ss_dssp HHTTCSEEEECCCHHHHHHCCHHHHHTS----TTCCCC------C-----------EECGGGTCCCEEEEEE--------
T ss_pred HHHcCCCEEEecccCccccccchhcccc----cccchhhhccccc-----------ccccCCCCccceeecC--------
Confidence 4566899999999999854322111000 0000000000000 0000111 111111
Q ss_pred CCcceeEEEEEeCCCCCCcC-------------------------------------CcCcCCCCcHHHHHHHHHHHHHH
Q 015367 215 ANSSILNLFFLDSGDRETVR-------------------------------------GVRTYGYIKESQLRWLHRVSEAL 257 (408)
Q Consensus 215 ~~~~~~~~i~LDS~~~~~~~-------------------------------------~~~~~g~i~~~Ql~WL~~~L~~~ 257 (408)
..++++.+|+....... .....+.++++|++||+++|+++
T Consensus 138 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~ 214 (320)
T d2nxfa1 138 ---PNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLS 214 (320)
T ss_dssp ---TTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHH
T ss_pred ---CCeEEEEecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhh
Confidence 13567777764221100 01133568899999999999987
Q ss_pred hhhhcccccccCCCCCeEEEecCCCCCccccccCCcccccccccccCCCC-hHHHHHHHhcCCeEEEEeccCCCCCcccC
Q 015367 258 QGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVN-SGVLQTLVSLGDIKAVFVGHDHTNDFCGN 336 (408)
Q Consensus 258 ~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~-~~~l~~l~~~~~V~~v~~GH~H~n~~~~~ 336 (408)
++ ..+++|+++|||+......... ...+ .++++.|.++++|+++|+||+|.++++..
T Consensus 215 ~~----------~~~~viv~~H~p~~~~~~~~~~------------~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~ 272 (320)
T d2nxfa1 215 DH----------KQERVLIFSHLPVHPCAADPIC------------LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD 272 (320)
T ss_dssp HH----------HTCEEEEEESSCCCTTSSCGGG------------SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC
T ss_pred hh----------cCCceEEEECCCCccCCCCCcc------------chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeec
Confidence 63 4678999999999754322110 1223 46888888888899999999999888888
Q ss_pred CCCeEEEEeCCcCCCCCCCCCCCCceEEEEEecC
Q 015367 337 LNGIWFCYGGGIGYHGYGKAGWPRRARIILAEAG 370 (408)
Q Consensus 337 ~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~~~ 370 (408)
.+|+.++..++..-.. ....++++++|..+
T Consensus 273 ~~g~~~i~~~~~~~~~----~~~~~~~~~~v~~d 302 (320)
T d2nxfa1 273 SSGAQHITLEGVIETP----PHSHAFATAYLYED 302 (320)
T ss_dssp TTSCEEEECCCGGGCC----TTSCEEEEEEECSS
T ss_pred cCCCEEEECCeeecCC----CCCCCEEEEEEECC
Confidence 8999888776553222 22469999999853
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.91 E-value=1.2e-23 Score=198.15 Aligned_cols=260 Identities=15% Similarity=0.164 Sum_probs=152.6
Q ss_pred CCCeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHH-HHHcCCCEEEEcCCcCCCCCc----ccHHHHHHH
Q 015367 59 DGTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRI-IEAEKPDFIAFTGDNIFGSST----TDVAESMIQ 133 (408)
Q Consensus 59 ~~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~pD~vv~~GDli~~~~~----~~~~~~~~~ 133 (408)
+.++||++++|++.... ..+.+.+. ++..+|||||++||+++.... ...+..+.+
T Consensus 5 ~~p~~F~v~GD~g~~~~--------------------~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~ 64 (312)
T d2qfra2 5 DVPYTFGLIGDLGQSFD--------------------SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGR 64 (312)
T ss_dssp SCCEEEEEECSCCSBHH--------------------HHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHH
T ss_pred CCCEEEEEEeeCCCCCc--------------------hHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHH
Confidence 45799999999864321 12233332 345789999999998754332 224556667
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCCCCCH---HHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCC
Q 015367 134 AFGPAMELGLPWAAVLGNHDQESTMDR---EELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPP 210 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~ 210 (408)
.++++ .+.+|+++++||||+...... +....+...+.. |... ....+..+|++++.+
T Consensus 65 ~~~~~-~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~------P~~~-----------~~~~~~~~Ysf~~g~-- 124 (312)
T d2qfra2 65 FTERS-VAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHV------PYEA-----------SQSTSPFWYSIKRAS-- 124 (312)
T ss_dssp HHHHH-HTTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCCC------CGGG-----------GTCSSTTSEEEEETT--
T ss_pred HHHHH-hhcceEEEecccccccccccccccccccchhhhccC------Cccc-----------cCCCCCceEEEEECC--
Confidence 77663 567999999999997532110 011112122211 1100 011123478888764
Q ss_pred CCCCCCcceeEEEEEeCCCCCCcCCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCcccccc
Q 015367 211 GSHLANSSILNLFFLDSGDRETVRGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYY 290 (408)
Q Consensus 211 ~~~~~~~~~~~~i~LDS~~~~~~~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~ 290 (408)
++|++|||... .....+|++||+++|++.++ ...+++||++|||++.......
T Consensus 125 ---------v~fi~Lds~~~---------~~~~~~Q~~WL~~~L~~~~~---------~~~~w~iv~~H~P~y~~~~~~~ 177 (312)
T d2qfra2 125 ---------AHIIVLSSYSA---------YGRGTPQYTWLKKELRKVKR---------SETPWLIVLMHSPLYNSYNHHF 177 (312)
T ss_dssp ---------EEEEECCTTSC---------CSTTSHHHHHHHHHHHTCCT---------TTCCEEEEECSSCSSCCBSTTT
T ss_pred ---------EEEEEeecccc---------ccchHHHHHHHHHHHHHHhh---------cCCCEEEEEccccccccCCCCc
Confidence 68999999532 11456899999999987642 2455799999999986432110
Q ss_pred CCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccC------------------CCCeEEEEeCCcCCC-
Q 015367 291 QNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGN------------------LNGIWFCYGGGIGYH- 351 (408)
Q Consensus 291 ~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~------------------~~gi~~~~~~~sg~~- 351 (408)
. .+ + .....+..+|.++ +|+++|+||+|.+++... -.|...+..|+.|..
T Consensus 178 ~--~~---~-----~~r~~l~~l~~~~-~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~ 246 (312)
T d2qfra2 178 M--EG---E-----AMRTKFEAWFVKY-KVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG 246 (312)
T ss_dssp T--TT---H-----HHHHHHHHHHHHT-TCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTS
T ss_pred c--cc---h-----hHHHHHHHHHHHc-CcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECcCCCcc
Confidence 0 00 0 0112344455555 699999999998664321 124434444544521
Q ss_pred ----CCC--CCC------CCCceEEEEEecCCCCCCccccceeEEEEEccCCCCCcccceeeecc
Q 015367 352 ----GYG--KAG------WPRRARIILAEAGKGENGWMEVEMIKTWKRLDDQRLSKIDEQVLWEM 404 (408)
Q Consensus 352 ----~~~--~~~------~~~g~rv~~i~~~~~~~~~~~~~~~~tw~r~~~~~~~~~~~~~~~~~ 404 (408)
.+. .+. ...|+-++++. +. ++-..+|++..+|.....|+-+|...
T Consensus 247 ~~~~~~~~~~~~~s~~~~~~~G~~~l~v~-n~-------t~l~~~~~~~~d~~~~~~D~~~i~~~ 303 (312)
T d2qfra2 247 VIDSNMIQPQPEYSAFREASFGHGMFDIK-NR-------THAHFSWNRNQDGVAVEADSVWFFNR 303 (312)
T ss_dssp CCCCCBCSSCCTTEEEEECCCEEEEEEEC-SS-------SEEEEEEEESSSCTTCCSEEEEEECT
T ss_pred cccccccCCCCCeeEEEecCCCEEEEEEE-cC-------CeEEEEEEECCCCCEEeeeEEEEEeC
Confidence 111 111 22377777775 22 24567788888887555699888765
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=8e-23 Score=190.71 Aligned_cols=226 Identities=19% Similarity=0.237 Sum_probs=133.8
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCccc-HHHHHHHH----H
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTD-VAESMIQA----F 135 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~-~~~~~~~~----l 135 (408)
.+||++++|+|.+........ ......+.+.+.+++.+|||||++||+++..+... ....+.+. +
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~ 73 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTA----------REMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVF 73 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCH----------HHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTS
T ss_pred CeEEEEEecCCCCCCcccccH----------HHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHh
Confidence 699999999997765432100 01123356777788899999999999986544321 11122222 2
Q ss_pred hhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCC
Q 015367 136 GPAMELGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLA 215 (408)
Q Consensus 136 ~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~ 215 (408)
......++|+++++||||+........ .... . .+. ...+..+|.+......
T Consensus 74 ~~~~~~~~P~~~~~GNHD~~~~~~~~~---~~~~--~-----~~~--------------~~~~~~~~~~~~~~~~----- 124 (302)
T d1utea_ 74 SDPSLRNVPWHVLAGNHDHLGNVSAQI---AYSK--I-----SKR--------------WNFPSPYYRLRFKIPR----- 124 (302)
T ss_dssp CSGGGTTCCEEECCCHHHHHSCHHHHH---HGGG--T-----STT--------------EECCSSSEEEEEECTT-----
T ss_pred hhhhhcCCceEEeeccccccccccccc---chhh--c-----ccc--------------ccCCCcccceeecccC-----
Confidence 333456899999999999865432211 1000 0 000 1112234555443322
Q ss_pred CcceeEEEEEeCCCCC----Cc----CCcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccc
Q 015367 216 NSSILNLFFLDSGDRE----TV----RGVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQ 287 (408)
Q Consensus 216 ~~~~~~~i~LDS~~~~----~~----~~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~ 287 (408)
....+.++++|+.... .. +.......+.++|++||++.|++. +.++++|++|||++....
T Consensus 125 ~~~~~~~~~ldt~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~~------------~~~~~iv~~h~~~~~~~~ 192 (302)
T d1utea_ 125 SNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA------------KEDYVLVAGHYPVWSIAE 192 (302)
T ss_dssp SSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC------------CCSEEEEECSSCSSCCSS
T ss_pred CCCcEEEEEccceeEeecccccccccccccccchhHHHHHHHHHHHHHhh------------ccCceEEEEeccccccCC
Confidence 1235788999974210 00 001122336789999999998774 467899999999976432
Q ss_pred cccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCC
Q 015367 288 LYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGY 350 (408)
Q Consensus 288 ~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~ 350 (408)
.... . .....+.+.|.++ +|+++||||+|.+++....+++.++.+++.|.
T Consensus 193 ~~~~--~----------~~~~~~~~ll~~~-~v~~~~~GH~H~~~r~~~~~~~~~i~~g~g~~ 242 (302)
T d1utea_ 193 HGPT--H----------CLVKQLLPLLTTH-KVTAYLCGHDHNLQYLQDENGLGFVLSGAGNF 242 (302)
T ss_dssp SCCC--H----------HHHHHTHHHHHHT-TCSEEEECSSSSEEEEECTTCCEEEEECBSSC
T ss_pred CCCc--h----------hhhhhhhHHHHhc-CceEEEeCCCcceEEEecCCccEEEEeCCCCC
Confidence 1100 0 0112455555555 69999999999977666677887776665543
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.78 E-value=2.8e-19 Score=161.89 Aligned_cols=75 Identities=21% Similarity=0.318 Sum_probs=55.0
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccH-------------
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDV------------- 127 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~------------- 127 (408)
+.||++|||+|... +.++++.+.+++.+||+||++||+++.......
T Consensus 2 ~~ri~~isD~h~~~--------------------~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~ 61 (257)
T d2yvta1 2 PRKVLAIKNFKERF--------------------DLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 61 (257)
T ss_dssp CCEEEEEECCTTCG--------------------GGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCT
T ss_pred CcEEEEEeCCCCCH--------------------HHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhce
Confidence 47999999999532 235678888899999999999998865432111
Q ss_pred ----------HHHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 128 ----------AESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 128 ----------~~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
...+...+..+.+.++|+|+|+||||..
T Consensus 62 ~~~~~~~n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~ 99 (257)
T d2yvta1 62 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAP 99 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCC
T ss_pred eeeccccccchhhHHHHHHHHHhcCCcEEEEeCCCcch
Confidence 1233445555556789999999999974
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.77 E-value=1.5e-18 Score=154.44 Aligned_cols=212 Identities=13% Similarity=0.034 Sum_probs=119.4
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHh
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAME 140 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 140 (408)
.-+|+.+||+|-. .+.++.+.+.+++.+||+||++||+++.......+..+.+. +.+
T Consensus 5 ~~~i~~~sd~hg~--------------------~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~---L~~ 61 (228)
T d1uf3a_ 5 VRYILATSNPMGD--------------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRI---LSE 61 (228)
T ss_dssp CCEEEEEECCTTC--------------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHH---HGG
T ss_pred ccEEEEEeCCCCC--------------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhh---hcc
Confidence 4689999999943 24567888888889999999999998766543344444444 345
Q ss_pred cCCCEEEEcCCCCCCCCCCHHHHHHHHHHccCCccccCCCCCCCcccccCCccccccCccceEEEeeCCCCCCCCCccee
Q 015367 141 LGLPWAAVLGNHDQESTMDREELMYFISLMDYSVAQVNPPAEDPSNLAKGGVMEKIDGFGNYDLRVYGPPGSHLANSSIL 220 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~y~~~v~~~~~~~~~~~~~~ 220 (408)
.++|+++|+||||.................+.. .. ....+..... .+
T Consensus 62 ~~~pv~~i~GNHD~~~~~~~~~~~~~~~~~~~~--~~--------------------~~~~~~~~~~-----------~~ 108 (228)
T d1uf3a_ 62 AHLPTAYVPGPQDAPIWEYLREAANVELVHPEM--RN--------------------VHETFTFWRG-----------PY 108 (228)
T ss_dssp GCSCEEEECCTTSCSHHHHHHHHHHHHHHCTTE--EE--------------------CBTSEEEETT-----------TE
T ss_pred ccceEEEEecCCCchhhhhhhhhcccccccccc--cc--------------------cceeeeeccC-----------CE
Confidence 589999999999974321111111111111000 00 0001111111 12
Q ss_pred EEEEEeCCCCCCcC-CcCcCCCCcHHHHHHHHHHHHHHhhhhcccccccCCCCCeEEEecCCCCCccccccCCccccccc
Q 015367 221 NLFFLDSGDRETVR-GVRTYGYIKESQLRWLHRVSEALQGQKQDSNRKVGAQLPGLAFFHIPIPETPQLYYQNIVGQFQE 299 (408)
Q Consensus 221 ~~i~LDS~~~~~~~-~~~~~g~i~~~Ql~WL~~~L~~~~~~~~~~~~~~~~~~~~iv~~HhPl~~~~~~~~~~~~g~~~e 299 (408)
.++.+++....... ...........|..|+.+.++.. ...+.|+++|+|+..... .
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------~~~~~il~~H~p~~~~~~----~------- 165 (228)
T d1uf3a_ 109 LVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL------------KDYPKIFLFHTMPYHKGL----N------- 165 (228)
T ss_dssp EEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGS------------CSCCEEEEESSCBCBTTT----B-------
T ss_pred EEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhc------------cCCceEEEEeeeccCccc----c-------
Confidence 34444432111111 11123456788888888865443 466789999999863211 0
Q ss_pred ccccCCCCh-HHHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEe
Q 015367 300 AVACSRVNS-GVLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAE 368 (408)
Q Consensus 300 ~~~~~~~~~-~~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~ 368 (408)
..++ .+.+.+.+. ++++++|||+|.. . ...++.++++.|+.+- .++.++++.
T Consensus 166 -----~~~~~~~~~~~~~~-~~~lvl~GH~H~~-~-~~~g~~~~v~pG~~~~---------g~y~~i~~~ 218 (228)
T d1uf3a_ 166 -----EQGSHEVAHLIKTH-NPLLVLVAGKGQK-H-EMLGASWVVVPGDLSE---------GEYSLLDLR 218 (228)
T ss_dssp -----TTSBHHHHHHHHHH-CCSEEEECCSSCE-E-EEETTEEEEECCBGGG---------TEEEEEETT
T ss_pred -----ccccHHHHHHHHhc-CCcEEEEcccccc-h-hccCCEEEEECCcccc---------ceEEEEEcc
Confidence 0122 455555565 5999999999973 2 3345555555443321 256677776
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.68 E-value=5.5e-17 Score=152.42 Aligned_cols=90 Identities=23% Similarity=0.309 Sum_probs=61.7
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCC-cccHHHHHHHHHhhhHh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSS-TTDVAESMIQAFGPAME 140 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~-~~~~~~~~~~~l~~~~~ 140 (408)
|||+|+||+|+|...... +.+.. .-.+.++++.+.+.+.+||+||++||+++... .......+.+.+..+..
T Consensus 1 Mkilh~SDlHlG~~~~~~-----~~~~~--~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~ 73 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHK-----PQREE--EFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKE 73 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-----HHHHH--HHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHT
T ss_pred CEEEEEecCcCCCCCcCc-----hhHHH--HHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHh
Confidence 799999999998654211 00000 01234566666677889999999999987543 23344556666766666
Q ss_pred cCCCEEEEcCCCCCCCCC
Q 015367 141 LGLPWAAVLGNHDQESTM 158 (408)
Q Consensus 141 ~~~p~~~v~GNHD~~~~~ 158 (408)
.++|+++++||||.....
T Consensus 74 ~~i~v~~i~GNHD~~~~~ 91 (333)
T d1ii7a_ 74 HSIPVFAIEGNHDRTQRG 91 (333)
T ss_dssp TTCCEEEECCTTTCCSSS
T ss_pred cCCcEEEeCCCCccccch
Confidence 789999999999986543
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.45 E-value=4.9e-14 Score=126.66 Aligned_cols=83 Identities=5% Similarity=-0.124 Sum_probs=51.5
Q ss_pred CCCeEEEecCCCCCccccccCCcccccccccccCCCChHHHH-HHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcC
Q 015367 271 QLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQ-TLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIG 349 (408)
Q Consensus 271 ~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~-~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg 349 (408)
....++++|+++........ .+........ .+....++++++|||+|. ......++..++..++.|
T Consensus 129 ~~~~~~~~H~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~~~d~vv~GHtH~-~~~~~~~~~~~in~Gsvg 195 (251)
T d1nnwa_ 129 GGNEVFGVYGSPINPFDGEV------------LAEQPTSYYEAIMRPVKDYEMLIVASPMY-PVDAMTRYGRVVCPGSVG 195 (251)
T ss_dssp TTEEEEEESSCSSCTTTCCC------------CSSCCHHHHHHHHGGGTTSSEEEESTTCS-EEEEEETTEEEEEECCSS
T ss_pred CCCcEEEEecCccCcccchh------------hhhhHHHHHhhhcccccCceEEEEeccce-EEEEEeeeeecccccccc
Confidence 34578899987654221110 0122333333 344556789999999998 566677889999999998
Q ss_pred CCCCCCCCCCCceEEEEEe
Q 015367 350 YHGYGKAGWPRRARIILAE 368 (408)
Q Consensus 350 ~~~~~~~~~~~g~rv~~i~ 368 (408)
+...+ +....+-+++++
T Consensus 196 ~~~~g--~~~~~y~i~d~~ 212 (251)
T d1nnwa_ 196 FPPGK--EHKATFALVDVD 212 (251)
T ss_dssp SCSSS--SCCEEEEEEETT
T ss_pred ccCCC--CCCCeEEEEEcC
Confidence 76544 222356666653
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.33 E-value=6.9e-12 Score=107.38 Aligned_cols=55 Identities=13% Similarity=0.049 Sum_probs=37.7
Q ss_pred HHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCC--CCCCCCCCCceEEEEEec
Q 015367 313 TLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYH--GYGKAGWPRRARIILAEA 369 (408)
Q Consensus 313 ~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~--~~~~~~~~~g~rv~~i~~ 369 (408)
.+.+..+.++++|||+|. ......+|..++..|+.|.. +.+ .+..+.+-+++++.
T Consensus 101 ~~~~~~~~divi~GHTH~-p~~~~~~~~~~iNPGSv~~pr~~~~-~~~~~syaild~~~ 157 (182)
T d1z2wa1 101 LLQRQFDVDILISGHTHK-FEAFEHENKFYINPGSATGAYNALE-TNIIPSFVLMDIQA 157 (182)
T ss_dssp HHHHHHSSSEEECCSSCC-CEEEEETTEEEEECCCTTCCCCSSC-SCCCCEEEEEEEET
T ss_pred HHHhccCCCEEEECCcCc-ceEEEECCEEEEeCCCCCCCCCCCC-CCCCCEEEEEEEeC
Confidence 333334589999999999 46667789888887777643 221 13345788998883
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.28 E-value=1.6e-11 Score=103.42 Aligned_cols=63 Identities=25% Similarity=0.212 Sum_probs=46.0
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|||+++||+|-. ...++.+.+.+++.+||.|+++||++.. ..+. .+...
T Consensus 1 MkI~iiSDiHgn--------------------~~al~~vl~~~~~~~~D~ii~~GD~~~~-------~~~~----~l~~~ 49 (165)
T d1s3la_ 1 MKIGIMSDTHDH--------------------LPNIRKAIEIFNDENVETVIHCGDFVSL-------FVIK----EFENL 49 (165)
T ss_dssp CEEEEECCCTTC--------------------HHHHHHHHHHHHHSCCSEEEECSCCCST-------HHHH----HGGGC
T ss_pred CEEEEEEeCCCC--------------------HHHHHHHHHHHHhcCCCEEEECCCccCH-------HHHH----HHhhc
Confidence 799999999932 1334566677788899999999997632 1121 22345
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
..|+++|.||||..
T Consensus 50 ~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 50 NANIIATYGNNDGE 63 (165)
T ss_dssp SSEEEEECCTTCCC
T ss_pred CccEEEEccccccc
Confidence 78999999999974
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.23 E-value=8.3e-11 Score=101.60 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=39.3
Q ss_pred HHHHHHhcCCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCC--CCCCCceEEEEEec
Q 015367 310 VLQTLVSLGDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGK--AGWPRRARIILAEA 369 (408)
Q Consensus 310 ~l~~l~~~~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~--~~~~~g~rv~~i~~ 369 (408)
.+..+.+..++++++|||+|. .+....+|..++..|+.|.. ++. .+..+++-+++++.
T Consensus 110 ~l~~~~~~~~~dvvi~GHTH~-~~~~~~~g~~~iNPGSvg~p-r~~~~~~~~~syaild~~~ 169 (193)
T d2a22a1 110 SLEQWQRRLDCDILVTGHTHK-LRVFEKNGKLFLNPGTATGA-FSALTPDAPPSFMLMALQG 169 (193)
T ss_dssp HHHHHHHHHTCSEEEECSSCC-CEEEEETTEEEEECCCSSCC-CCTTSTTCCCEEEEEEEET
T ss_pred HHHHHHhhcCCCEEEEcCccC-ceEEEECCEEEEECCCCCcC-cCCCCCCCCCEEEEEEEEC
Confidence 344444344689999999999 46677889888887777632 211 13345788888873
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.96 E-value=1.3e-08 Score=85.73 Aligned_cols=48 Identities=15% Similarity=-0.024 Sum_probs=35.7
Q ss_pred CCeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEEe
Q 015367 318 GDIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILAE 368 (408)
Q Consensus 318 ~~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i~ 368 (408)
.+.+++++||+|. .+....+|+.++..|+.|..-.+ .....+-+++++
T Consensus 101 ~~~dvvi~GHTH~-p~~~~~~~~~~iNPGSvg~pr~~--~~~~syail~~~ 148 (173)
T d3ck2a1 101 EEAAICLYGHLHV-PSAWLEGKILFLNPGSISQPRGT--IRECLYARVEID 148 (173)
T ss_dssp TTCSEEECCSSCC-EEEEEETTEEEEEECCSSSCCTT--CCSCCEEEEEEC
T ss_pred cCCCEEEeCCcCc-ceEEEECCEEEEECCCCCCCCCC--CCCCEEEEEEEe
Confidence 4589999999998 46667789999988888754222 123478888886
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=2.8e-08 Score=84.30 Aligned_cols=73 Identities=18% Similarity=0.240 Sum_probs=49.3
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccH--HHHHHHHHhhhH
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDV--AESMIQAFGPAM 139 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~--~~~~~~~l~~~~ 139 (408)
|||++|||+|.. ...++++.+.+++.++|.||++||+++....... .....+.+..+.
T Consensus 2 Mki~iiSDiHg~--------------------~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~ 61 (184)
T d1su1a_ 2 MKLMFASDIHGS--------------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLN 61 (184)
T ss_dssp CEEEEECCCTTB--------------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHH
T ss_pred cEEEEEeecCCC--------------------HHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHH
Confidence 899999999921 1345677787888899999999998865432110 011112222233
Q ss_pred hcCCCEEEEcCCCCC
Q 015367 140 ELGLPWAAVLGNHDQ 154 (408)
Q Consensus 140 ~~~~p~~~v~GNHD~ 154 (408)
..+.++++|.||||.
T Consensus 62 ~~~~~~~~v~GNhD~ 76 (184)
T d1su1a_ 62 EVAHKVIAVRGNCDS 76 (184)
T ss_dssp TTGGGEEECCCTTCC
T ss_pred hcCCcEEEecCCCCc
Confidence 446789999999997
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.47 E-value=1.8e-06 Score=80.16 Aligned_cols=94 Identities=18% Similarity=0.190 Sum_probs=47.5
Q ss_pred CeEEEEEeccCcCCCCccccCccccccccccCChHH----HHHHHHHHHHcCCCE-EEEcCCcCCCCCccc--HHHHHHH
Q 015367 61 TFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNT----TRFLKRIIEAEKPDF-IAFTGDNIFGSSTTD--VAESMIQ 133 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~pD~-vv~~GDli~~~~~~~--~~~~~~~ 133 (408)
+++|+|++|+|-.-..... .. .+... ++.+++...+.+|+. ++.+||++.+..... ......+
T Consensus 8 ~ltILhtnD~Hg~l~~~~~-~~---------~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~ 77 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEY-GE---------YGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR 77 (337)
T ss_dssp EEEEEEECCCTTCCSCCTT-SC---------CCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHH
T ss_pred EEEEEEEeecccCCcCCCC-CC---------cCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHH
Confidence 4899999999943222100 00 11122 233333444567774 455999875432100 0122333
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCCCCCHHHHHHHHHHc
Q 015367 134 AFGPAMELGLPWAAVLGNHDQESTMDREELMYFISLM 170 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~ 170 (408)
.+. ..++-+ .++||||+..+ .+.+.++....
T Consensus 78 ~mn---~~g~Da-~~~GNHEfd~G--~~~l~~~~~~~ 108 (337)
T d1usha2 78 GMN---LVGYDA-MAIGNHEFDNP--LTVLRQQEKWA 108 (337)
T ss_dssp HHH---HHTCCE-EECCGGGGSSC--HHHHHHHHHHC
T ss_pred HHH---hcCCeE-EEechhhhccc--hHHHHHHHHhc
Confidence 333 335554 57899999654 34455555443
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.25 E-value=1.4e-06 Score=80.49 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=44.1
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChH-HHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccH----HHHHHH
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLN-TTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDV----AESMIQ 133 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~----~~~~~~ 133 (408)
+.++|+|.+|+|-.-.......+ ....|+ +.. ....+.+..++.+++ ++|.+||++++...... -....+
T Consensus 10 ~~l~iLhtnD~Hg~l~~~~~~~~-~~~~~g---g~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~ 85 (322)
T d3c9fa2 10 NDINFVHTTDTHGWYSGHINQPL-YHANWG---DFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTP 85 (322)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGG-GCCCHH---HHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHH
T ss_pred CEEEEEEEeccccCCCCcccccc-ccCccc---cHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHH
Confidence 47999999999954322110000 000110 111 122334444556787 45579998865321100 012223
Q ss_pred HHhhhHhcCCCEEEEcCCCCCCCC
Q 015367 134 AFGPAMELGLPWAAVLGNHDQEST 157 (408)
Q Consensus 134 ~l~~~~~~~~p~~~v~GNHD~~~~ 157 (408)
++. ..++. ++++||||+..+
T Consensus 86 ~mn---~lgyD-a~t~GNHEfd~g 105 (322)
T d3c9fa2 86 IFI---KQDYD-LLTIGNHELYLW 105 (322)
T ss_dssp HHT---TSCCS-EECCCGGGSSSH
T ss_pred HHh---ccCCc-EEeecceecccc
Confidence 332 22443 568899999654
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.07 E-value=4e-06 Score=71.00 Aligned_cols=79 Identities=14% Similarity=0.176 Sum_probs=47.6
Q ss_pred EEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH--cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 64 ILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA--EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 64 i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|-++||+|++.....+.|.. .... ...+.+.+..++ .+.|.|+++||+.......+. +.+.++. .
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f-----~~~~--~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~---~~~~l~~---L 70 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPE-----VRFK--GFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNE---YLRIWKA---L 70 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTT-----TCCT--THHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTS---HHHHHHH---S
T ss_pred EEEEeCcCCCCcchhhcCCC-----CCHH--HHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHH---HHHHHHH---C
Confidence 55799999997653221111 0011 223556666665 467999999997754433222 2333333 2
Q ss_pred CCCEEEEcCCCCCC
Q 015367 142 GLPWAAVLGNHDQE 155 (408)
Q Consensus 142 ~~p~~~v~GNHD~~ 155 (408)
+...+.|.||||..
T Consensus 71 ~g~~~lI~GNHD~~ 84 (188)
T d1xm7a_ 71 PGRKILVMGNHDKD 84 (188)
T ss_dssp SSEEEEECCTTCCC
T ss_pred CCceEEEecCCCch
Confidence 55689999999973
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.91 E-value=3.7e-05 Score=69.95 Aligned_cols=97 Identities=18% Similarity=0.128 Sum_probs=49.1
Q ss_pred CeEEEEEeccCcCCCCcc-ccCccccccccccCChHHHHHHHHHHHHcCCC-EEEEcCCcCCCCCcccHH--HHHHHHHh
Q 015367 61 TFKILQVADMHYGMGKVT-RCRDVTATEFKYCSDLNTTRFLKRIIEAEKPD-FIAFTGDNIFGSSTTDVA--ESMIQAFG 136 (408)
Q Consensus 61 ~~ri~~iSDlH~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD-~vv~~GDli~~~~~~~~~--~~~~~~l~ 136 (408)
+++|+|.+|+|-.-.... .+.+. ....-+...+..+.+.+++..|+ +++-+||++.+....... ....+.+.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~----~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~n 77 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGE----KTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMH 77 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSS----EEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred EEEEEEEcccccCcccccccccCC----ccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHhHhhhcchhHHHHHH
Confidence 378999999995432210 01000 00012333445555555555664 788899987543211110 11222222
Q ss_pred hhHhcCCCEEEEcCCCCCCCCCCHHHHHHHH
Q 015367 137 PAMELGLPWAAVLGNHDQESTMDREELMYFI 167 (408)
Q Consensus 137 ~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~ 167 (408)
..++- ..++||||+..+ .+.+.++.
T Consensus 78 ---~~gyD-a~~~GNHEfd~G--~~~l~~~~ 102 (302)
T d2z1aa2 78 ---RLRYR-AMALGNHEFDLG--PGPLADFL 102 (302)
T ss_dssp ---HTTCC-EEECCGGGGTTC--HHHHHHHH
T ss_pred ---hcccc-cccccchhhhcC--hhHHHHHh
Confidence 23444 668899999654 34444443
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.63 E-value=2e-05 Score=68.04 Aligned_cols=64 Identities=25% Similarity=0.234 Sum_probs=42.3
Q ss_pred EEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH-cCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 63 KILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA-EKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 63 ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
||.+|||+|-.. +.++.+.+.++. ...|.+|++||+++.+. +..+.+ +.+ .
T Consensus 14 rI~vIgDIHG~~--------------------~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp--~s~~vl-~~l-----~ 65 (219)
T d1g5ba_ 14 NIWVVGDLHGCY--------------------TNLMNKLDTIGFDNKKDLLISVGDLVDRGA--ENVECL-ELI-----T 65 (219)
T ss_dssp CEEEECCCTTCH--------------------HHHHHHHHHHTCCTTTCEEEECSCCSSSSS--CHHHHH-GGG-----G
T ss_pred eEEEEEecccCH--------------------HHHHHHHHHcCCCCCCCEEEEeCCccccCc--cHHHHH-HHh-----h
Confidence 799999999321 234455555542 45689999999998765 333332 222 2
Q ss_pred CCCEEEEcCCCCC
Q 015367 142 GLPWAAVLGNHDQ 154 (408)
Q Consensus 142 ~~p~~~v~GNHD~ 154 (408)
...+.+|.||||.
T Consensus 66 ~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 66 FPWFRAVRGNHEQ 78 (219)
T ss_dssp STTEEECCCHHHH
T ss_pred ccccccccCcHHH
Confidence 3468999999995
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.58 E-value=0.041 Score=48.49 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=30.3
Q ss_pred CEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 110 DFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 110 D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
.-.|+.||++|.+. ...+.+.-.+.-.+..+--++.+.||||..
T Consensus 73 ~~ylFLGDYVDRG~--~slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 73 TNYLFMGDYVDRGY--YSVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp SCEEECSCCCCSSS--SHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ceEEecCcccCCCC--cceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 45899999997764 344444444432245567799999999974
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=94.28 E-value=0.052 Score=47.92 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=29.9
Q ss_pred CEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 110 DFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 110 D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
.-.|++||++|.+. ...+.+.-.++-....+--++.+.||||..
T Consensus 80 ~~ylFLGDYVDRG~--~slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 80 SNYLFLGDYVDRGK--QSLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp SCEEECSCCSSSSS--CHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred ceEEeeccccCCCc--cchHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 45899999997764 344444433332245567799999999974
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.58 E-value=0.048 Score=48.82 Aligned_cols=69 Identities=25% Similarity=0.224 Sum_probs=43.8
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHH--cCCC--EEEEcCCcCCCCCcccHHHHHHHHHhh
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEA--EKPD--FIAFTGDNIFGSSTTDVAESMIQAFGP 137 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~pD--~vv~~GDli~~~~~~~~~~~~~~~l~~ 137 (408)
-.|.++.|+|-... -+.+.++. ..|+ -.|++||++|.+. ...+.+.-.+.-
T Consensus 60 ~pv~VvGDiHGq~~-----------------------DL~~if~~~g~p~~~~~ylFLGDYVDRG~--~slEvi~lL~~l 114 (324)
T d1s95a_ 60 EKITVCGDTHGQFY-----------------------DLLNIFELNGLPSETNPYIFNGDFVDRGS--FSVEVILTLFGF 114 (324)
T ss_dssp CEEEEECCCTTCHH-----------------------HHHHHHHHHCCCBTTBCEEEESCCSSSST--THHHHHHHHHHH
T ss_pred CCEEEEEECCCCHH-----------------------HHHHHHHHCCCCCCCCeEEEecccccCcC--cceeehHHHHHH
Confidence 36889999995421 23344333 2332 4899999997764 344554444432
Q ss_pred hHhcCCCEEEEcCCCCCC
Q 015367 138 AMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 138 ~~~~~~p~~~v~GNHD~~ 155 (408)
.+..+--++.+.||||..
T Consensus 115 Ki~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 115 KLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp HHHSTTTEEEECCTTSSH
T ss_pred HHhCCCcEEeccCCcccc
Confidence 244567799999999974
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.04 E-value=0.053 Score=50.81 Aligned_cols=44 Identities=16% Similarity=0.119 Sum_probs=29.1
Q ss_pred CEEEEcCCcCCCCCcccHHHHHHHHHhhhHhcCCCEEEEcCCCCCC
Q 015367 110 DFIAFTGDNIFGSSTTDVAESMIQAFGPAMELGLPWAAVLGNHDQE 155 (408)
Q Consensus 110 D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~~p~~~v~GNHD~~ 155 (408)
.-.|+.||+||.+. ...+.+.-++.-.+..+--++.+.||||..
T Consensus 98 ~~yLFLGDYVDRG~--~SlEvlllL~aLKi~yP~~V~LLRGNHE~~ 141 (473)
T d1auia_ 98 TRYLFLGDYVDRGY--FSIECVLYLWALKILYPKTLFLLRGNHECR 141 (473)
T ss_dssp CCEEECSCCSSSSS--CHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred ceEEecCccccCCc--ccHHHHHHHHHHHHhCCCeEEEeCCCCccH
Confidence 34789999997764 334444433332234567799999999963
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=89.25 E-value=0.59 Score=40.22 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=45.7
Q ss_pred CCeEEEEEeccCcCCCCccccCccccccccccCChHHH-HHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhh
Q 015367 60 GTFKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTT-RFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPA 138 (408)
Q Consensus 60 ~~~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 138 (408)
+.|||++|.|+=-... .+.+ +.+-+..++.++||||..|-...++.... .+...+ +
T Consensus 3 ~~MkILfiGDIvG~~G------------------R~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git-~k~~~e----L 59 (281)
T d1t71a_ 3 NSIKFIFLGDVYGKAG------------------RNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS-LKHYEF----L 59 (281)
T ss_dssp CCCEEEEECEEBHHHH------------------HHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC-HHHHHH----H
T ss_pred ccceEEEEEccCCHHH------------------HHHHHHHhHHHHHHhCCCEEEECCccCCCCcCCC-HHHHHH----H
Confidence 3799999999943221 1222 33455666789999999999876553221 122222 3
Q ss_pred HhcCCCEEEEcCCCCCC
Q 015367 139 MELGLPWAAVLGNHDQE 155 (408)
Q Consensus 139 ~~~~~p~~~v~GNHD~~ 155 (408)
++.++.++ +.|||=+.
T Consensus 60 ~~~GvDvI-T~GNH~wd 75 (281)
T d1t71a_ 60 KEAGVNYI-TMGNHTWF 75 (281)
T ss_dssp HHHTCCEE-ECCTTTTC
T ss_pred HHhCCcEE-EcCchhhh
Confidence 45688866 78999653
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=88.12 E-value=1.5 Score=36.91 Aligned_cols=79 Identities=20% Similarity=0.260 Sum_probs=45.5
Q ss_pred eEEEEEeccCcCCCCccccCccccccccccCChHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcccHHHHHHHHHhhhHhc
Q 015367 62 FKILQVADMHYGMGKVTRCRDVTATEFKYCSDLNTTRFLKRIIEAEKPDFIAFTGDNIFGSSTTDVAESMIQAFGPAMEL 141 (408)
Q Consensus 62 ~ri~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 141 (408)
|||++|.|+=-.. +.+.++.....+.+ +.||||..|....++.... .+...+ +++.
T Consensus 1 MkiLfiGDIvG~~------------------Gr~~v~~~Lp~Lk~-~~DfVIaNgENaa~G~Git-~k~~~~----L~~~ 56 (252)
T d2z06a1 1 MRVLFIGDVMAEP------------------GLRAVGLHLPDIRD-RYDLVIANGENAARGKGLD-RRSYRL----LREA 56 (252)
T ss_dssp CEEEEECCBCHHH------------------HHHHHHHHHHHHGG-GCSEEEEECTTTTTTSSCC-HHHHHH----HHHH
T ss_pred CeEEEEeccCCHH------------------HHHHHHHHhHHHHh-hCCEEEEeeeccCCCcCCC-HHHHHH----HHHh
Confidence 6899999984221 12333333333433 5799999999876553221 122222 3456
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q 015367 142 GLPWAAVLGNHDQESTMDREELMYFISL 169 (408)
Q Consensus 142 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~ 169 (408)
++.++ +.|||=+... ++.++...
T Consensus 57 GVDvI-T~GNH~wdkk----ei~~~i~~ 79 (252)
T d2z06a1 57 GVDLV-SLGNHAWDHK----EVYALLES 79 (252)
T ss_dssp TCCEE-ECCTTTTSCT----THHHHHHH
T ss_pred CCCEE-EcCcccccch----hhhhhhcc
Confidence 88866 7899976432 34455544
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=85.31 E-value=0.27 Score=40.11 Aligned_cols=47 Identities=15% Similarity=0.123 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCCCccccccCCcccccccccccCCCChHHHHHHHhcCCeEEEEeccCCCC
Q 015367 271 QLPGLAFFHIPIPETPQLYYQNIVGQFQEAVACSRVNSGVLQTLVSLGDIKAVFVGHDHTN 331 (408)
Q Consensus 271 ~~~~iv~~HhPl~~~~~~~~~~~~g~~~e~~~~~~~~~~~l~~l~~~~~V~~v~~GH~H~n 331 (408)
....++++|+|+...... ... .....+.....+ .++.++++||+|.+
T Consensus 105 ~g~~i~l~H~P~~~~~~~---~~~----------~~~~~~~~~~~~-~~~~~~lhGH~H~~ 151 (188)
T d1xm7a_ 105 KGKRILLSHYPAKDPITE---RYP----------DRQEMVREIYFK-ENCDLLIHGHVHWN 151 (188)
T ss_dssp TTEEEEEESSCSSCSSCC---SCH----------HHHHHHHHHHHH-TTCSEEEECCCCCC
T ss_pred CCeEEEEEeCCCcccccc---ccc----------cchhHHHHHHHh-cCceEEEEeeccCC
Confidence 345799999998642210 100 001123333344 45899999999974
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=84.77 E-value=0.41 Score=38.22 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=30.9
Q ss_pred CeEEEEeccCCCCCcccCCCCeEEEEeCCcCCCCCCCCCCCCceEEEEE
Q 015367 319 DIKAVFVGHDHTNDFCGNLNGIWFCYGGGIGYHGYGKAGWPRRARIILA 367 (408)
Q Consensus 319 ~V~~v~~GH~H~n~~~~~~~gi~~~~~~~sg~~~~~~~~~~~g~rv~~i 367 (408)
+.+++++||+|. ......+|+.++..|+.|.. .+ +..+.+-+++.
T Consensus 119 ~~d~vv~GHtH~-p~~~~~~~~~~iNpGS~~~p-r~--~~~~sy~il~~ 163 (184)
T d1su1a_ 119 QNDVLVYGHTHL-PVAEQRGEIFHFNPGSVSIP-KG--GNPASYGMLDN 163 (184)
T ss_dssp TTCEEECCSSCC-CEEEEETTEEEEECCCSSCC-CT--TCCCEEEEEET
T ss_pred CCCEEEECCccc-eeEEEECCEEEEECCCCCCC-CC--CCCCEEEEEEC
Confidence 358999999998 45567789888888777653 22 12345666653
|