Query 015368
Match_columns 408
No_of_seqs 307 out of 3279
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 11:23:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f8u_A Protein disulfide-isome 100.0 1.4E-48 4.7E-53 379.6 32.2 340 57-405 2-368 (481)
2 3us3_A Calsequestrin-1; calciu 100.0 4.8E-48 1.7E-52 361.2 33.6 315 54-380 11-351 (367)
3 2r2j_A Thioredoxin domain-cont 100.0 1.1E-48 3.7E-53 368.2 26.1 321 56-390 5-344 (382)
4 1sji_A Calsequestrin 2, calseq 100.0 5.1E-47 1.7E-51 353.0 33.5 313 55-380 10-349 (350)
5 2b5e_A Protein disulfide-isome 100.0 1.5E-45 5.2E-50 359.9 23.2 332 54-405 12-374 (504)
6 3apo_A DNAJ homolog subfamily 100.0 2.3E-35 7.9E-40 302.7 31.7 312 54-380 114-545 (780)
7 3apo_A DNAJ homolog subfamily 100.0 7.6E-34 2.6E-38 291.4 31.2 308 56-378 440-768 (780)
8 3ed3_A Protein disulfide-isome 100.0 1.7E-32 6E-37 247.9 23.3 221 54-275 15-279 (298)
9 2h8l_A Protein disulfide-isome 100.0 1.4E-30 4.7E-35 230.6 19.0 230 158-397 2-251 (252)
10 3idv_A Protein disulfide-isome 100.0 9.6E-30 3.3E-34 224.3 24.3 208 54-267 13-239 (241)
11 3ec3_A Protein disulfide-isome 100.0 1.8E-30 6.3E-35 229.3 17.9 225 159-396 3-248 (250)
12 4f9z_D Endoplasmic reticulum r 99.9 2E-26 6.9E-31 200.5 19.5 210 162-379 9-227 (227)
13 3uem_A Protein disulfide-isome 99.9 3E-26 1E-30 214.1 18.4 241 156-404 11-264 (361)
14 3q6o_A Sulfhydryl oxidase 1; p 99.9 1.6E-23 5.5E-28 184.5 24.1 201 55-261 11-236 (244)
15 2ppt_A Thioredoxin-2; thiredox 99.9 5.6E-24 1.9E-28 173.5 16.8 136 27-162 18-153 (155)
16 3zzx_A Thioredoxin; oxidoreduc 99.9 1.7E-23 5.7E-28 158.3 14.5 96 62-159 7-104 (105)
17 3p2a_A Thioredoxin 2, putative 99.9 1.6E-23 5.4E-28 169.9 15.4 136 27-162 9-144 (148)
18 2ywm_A Glutaredoxin-like prote 99.9 1E-22 3.6E-27 177.7 20.8 192 64-263 9-218 (229)
19 1a8l_A Protein disulfide oxido 99.9 6.2E-23 2.1E-27 178.8 19.1 193 64-262 10-223 (226)
20 3uem_A Protein disulfide-isome 99.9 7.1E-21 2.4E-25 177.7 32.7 302 56-376 17-356 (361)
21 2qsi_A Putative hydrogenase ex 99.9 4.4E-23 1.5E-27 160.4 13.1 105 56-160 15-122 (137)
22 2qgv_A Hydrogenase-1 operon pr 99.9 3.4E-23 1.2E-27 161.6 11.1 108 57-164 18-128 (140)
23 3gnj_A Thioredoxin domain prot 99.9 3.2E-22 1.1E-26 153.7 15.9 106 56-161 4-110 (111)
24 3h79_A Thioredoxin-like protei 99.9 1.3E-22 4.6E-27 159.8 13.8 106 54-159 13-126 (127)
25 2voc_A Thioredoxin; electron t 99.9 2E-22 6.9E-27 155.1 14.2 105 58-163 3-107 (112)
26 3t58_A Sulfhydryl oxidase 1; o 99.9 2.1E-21 7.1E-26 187.3 24.4 202 55-262 11-237 (519)
27 3tco_A Thioredoxin (TRXA-1); d 99.9 5.3E-22 1.8E-26 151.8 15.1 105 56-160 4-108 (109)
28 3qfa_C Thioredoxin; protein-pr 99.9 2.4E-22 8.4E-27 155.6 13.1 105 54-160 10-116 (116)
29 2av4_A Thioredoxin-like protei 99.9 1.6E-22 5.4E-27 159.4 11.9 103 58-160 23-138 (160)
30 3die_A Thioredoxin, TRX; elect 99.9 6.7E-22 2.3E-26 150.5 14.7 104 56-160 3-106 (106)
31 2dj1_A Protein disulfide-isome 99.9 7.3E-22 2.5E-26 158.4 15.4 112 54-166 15-129 (140)
32 2trx_A Thioredoxin; electron t 99.9 8.7E-22 3E-26 150.5 14.9 105 56-160 2-107 (108)
33 1nsw_A Thioredoxin, TRX; therm 99.9 6.8E-22 2.3E-26 150.2 14.2 103 58-160 2-104 (105)
34 1w4v_A Thioredoxin, mitochondr 99.9 1.8E-21 6.1E-26 151.5 15.1 111 51-161 8-119 (119)
35 3hz4_A Thioredoxin; NYSGXRC, P 99.9 1.4E-21 5E-26 156.6 14.4 107 55-161 5-112 (140)
36 2yzu_A Thioredoxin; redox prot 99.9 2E-21 7E-26 148.5 14.6 105 57-161 2-106 (109)
37 1x5d_A Protein disulfide-isome 99.9 1.9E-21 6.6E-26 154.5 14.5 107 55-161 6-117 (133)
38 1t00_A Thioredoxin, TRX; redox 99.9 3.3E-21 1.1E-25 148.3 15.2 106 56-161 5-111 (112)
39 3f3q_A Thioredoxin-1; His TAG, 99.9 3.8E-21 1.3E-25 147.1 15.5 102 57-160 8-109 (109)
40 3apq_A DNAJ homolog subfamily 99.9 1.1E-21 3.9E-26 168.5 13.9 116 54-169 95-210 (210)
41 2i4a_A Thioredoxin; acidophIle 99.9 3E-21 1E-25 147.1 14.5 104 56-159 2-106 (107)
42 3uvt_A Thioredoxin domain-cont 99.9 2.8E-21 9.4E-26 148.4 14.0 103 56-159 5-110 (111)
43 1thx_A Thioredoxin, thioredoxi 99.9 5E-21 1.7E-25 147.9 15.5 106 56-161 7-113 (115)
44 2e0q_A Thioredoxin; electron t 99.9 3.9E-21 1.3E-25 145.6 14.6 103 58-161 1-103 (104)
45 1v98_A Thioredoxin; oxidoreduc 99.9 2.8E-21 9.4E-26 155.0 14.1 132 28-161 7-138 (140)
46 2o8v_B Thioredoxin 1; disulfid 99.9 2.1E-21 7.3E-26 152.9 13.2 105 56-160 22-127 (128)
47 1dby_A Chloroplast thioredoxin 99.9 4.3E-21 1.5E-25 146.3 14.2 104 57-160 2-106 (107)
48 1x5e_A Thioredoxin domain cont 99.9 3.8E-21 1.3E-25 151.3 14.0 110 55-167 6-116 (126)
49 4euy_A Uncharacterized protein 99.9 6E-22 2.1E-26 150.5 8.7 97 63-160 8-104 (105)
50 1gh2_A Thioredoxin-like protei 99.9 9.4E-21 3.2E-25 144.4 14.9 102 58-161 3-107 (107)
51 1r26_A Thioredoxin; redox-acti 99.9 1.2E-20 4.2E-25 147.8 15.7 104 56-161 19-123 (125)
52 1fb6_A Thioredoxin M; electron 99.9 9.8E-21 3.3E-25 143.7 14.7 103 58-160 2-105 (105)
53 2l5l_A Thioredoxin; structural 99.9 1E-20 3.5E-25 150.9 15.3 107 55-162 8-127 (136)
54 1ep7_A Thioredoxin CH1, H-type 99.9 1.2E-20 4E-25 145.2 14.9 104 57-161 3-111 (112)
55 2dml_A Protein disulfide-isome 99.9 5E-21 1.7E-25 151.5 13.1 107 54-160 15-123 (130)
56 3hxs_A Thioredoxin, TRXP; elec 99.9 6.5E-21 2.2E-25 153.1 13.6 108 53-161 19-139 (141)
57 1mek_A Protein disulfide isome 99.9 1.2E-21 4E-26 152.7 8.9 109 55-163 6-119 (120)
58 1syr_A Thioredoxin; SGPP, stru 99.9 1.1E-20 3.9E-25 145.2 14.3 103 56-160 9-111 (112)
59 2i1u_A Thioredoxin, TRX, MPT46 99.9 8.6E-21 2.9E-25 148.1 13.6 107 54-160 10-117 (121)
60 2pu9_C TRX-F, thioredoxin F-ty 99.9 1.7E-20 5.7E-25 144.1 14.7 104 55-160 4-110 (111)
61 3ga4_A Dolichyl-diphosphooligo 99.8 8.8E-21 3E-25 155.1 13.0 111 55-165 17-157 (178)
62 3aps_A DNAJ homolog subfamily 99.8 5.4E-21 1.9E-25 149.5 11.4 107 56-162 3-114 (122)
63 2vlu_A Thioredoxin, thioredoxi 99.8 2.8E-20 9.4E-25 145.4 15.4 104 56-161 13-120 (122)
64 3d6i_A Monothiol glutaredoxin- 99.8 1.7E-20 5.9E-25 144.2 13.9 102 58-160 2-108 (112)
65 1xwb_A Thioredoxin; dimerizati 99.8 2.6E-20 8.8E-25 141.6 14.7 101 58-159 2-105 (106)
66 3gix_A Thioredoxin-like protei 99.8 7.8E-21 2.7E-25 153.6 12.4 100 61-160 9-120 (149)
67 3ul3_B Thioredoxin, thioredoxi 99.8 2.8E-21 9.5E-26 152.4 9.3 98 61-158 30-127 (128)
68 3m9j_A Thioredoxin; oxidoreduc 99.8 3E-20 1E-24 141.0 14.6 97 62-160 7-105 (105)
69 3dxb_A Thioredoxin N-terminall 99.8 1.9E-20 6.5E-25 162.2 14.9 112 52-163 8-120 (222)
70 3qou_A Protein YBBN; thioredox 99.8 1.5E-20 5.2E-25 169.7 14.8 107 55-161 6-114 (287)
71 2xc2_A Thioredoxinn; oxidoredu 99.8 3.1E-20 1.1E-24 144.0 14.2 101 57-160 14-117 (117)
72 2oe3_A Thioredoxin-3; electron 99.8 2.6E-20 8.8E-25 143.5 13.5 100 57-158 13-113 (114)
73 3emx_A Thioredoxin; structural 99.8 1.2E-20 4E-25 150.2 11.7 105 55-163 15-128 (135)
74 2l57_A Uncharacterized protein 99.8 1.2E-20 4.1E-25 148.4 11.3 96 68-163 21-119 (126)
75 1oaz_A Thioredoxin 1; immune s 99.8 4.2E-21 1.4E-25 150.0 8.2 105 56-160 3-122 (123)
76 3bj5_A Protein disulfide-isome 99.8 1.2E-20 4E-25 151.3 10.8 133 259-395 7-147 (147)
77 1xfl_A Thioredoxin H1; AT3G510 99.8 7.5E-20 2.6E-24 143.2 15.1 104 55-160 15-123 (124)
78 2l6c_A Thioredoxin; oxidoreduc 99.8 2E-20 6.8E-25 143.3 11.5 103 58-162 5-107 (110)
79 2vim_A Thioredoxin, TRX; thior 99.8 8.5E-20 2.9E-24 138.2 14.9 100 59-160 2-104 (104)
80 1zma_A Bacterocin transport ac 99.8 1.3E-20 4.3E-25 146.4 10.3 102 56-157 12-117 (118)
81 2wz9_A Glutaredoxin-3; protein 99.8 8.6E-20 2.9E-24 148.5 15.5 105 56-162 12-119 (153)
82 1faa_A Thioredoxin F; electron 99.8 9.5E-20 3.2E-24 142.8 15.1 103 56-160 18-123 (124)
83 2djj_A PDI, protein disulfide- 99.8 7E-21 2.4E-25 148.6 8.4 107 54-163 5-119 (121)
84 2es7_A Q8ZP25_salty, putative 99.8 9.8E-21 3.3E-25 151.1 8.7 111 57-168 18-132 (142)
85 2dj0_A Thioredoxin-related tra 99.8 4.6E-21 1.6E-25 153.1 5.4 104 56-159 7-119 (137)
86 2j23_A Thioredoxin; immune pro 99.8 1E-19 3.4E-24 141.9 12.5 104 56-160 15-120 (121)
87 1qgv_A Spliceosomal protein U5 99.8 7.4E-20 2.5E-24 146.6 11.8 99 62-160 10-120 (142)
88 3evi_A Phosducin-like protein 99.8 1.5E-19 5.2E-24 139.0 12.6 100 56-159 3-112 (118)
89 2f51_A Thioredoxin; electron t 99.8 2.4E-19 8.1E-24 139.1 13.7 105 57-163 4-115 (118)
90 2vm1_A Thioredoxin, thioredoxi 99.8 4.3E-19 1.5E-23 137.7 15.0 105 56-162 6-115 (118)
91 3d22_A TRXH4, thioredoxin H-ty 99.8 4.2E-19 1.5E-23 142.0 15.4 106 55-162 23-133 (139)
92 2dj3_A Protein disulfide-isome 99.8 1.3E-20 4.5E-25 149.7 6.3 110 55-164 6-121 (133)
93 1ti3_A Thioredoxin H, PTTRXH1; 99.8 2.7E-19 9.1E-24 137.7 12.7 103 56-160 4-111 (113)
94 2hls_A Protein disulfide oxido 99.8 1.4E-18 4.7E-23 152.2 18.4 189 64-264 15-225 (243)
95 3cxg_A Putative thioredoxin; m 99.8 2.6E-19 8.8E-24 141.9 11.3 104 55-161 19-129 (133)
96 3idv_A Protein disulfide-isome 99.8 6.6E-19 2.3E-23 154.7 14.8 108 56-164 130-240 (241)
97 3f8u_A Protein disulfide-isome 99.8 9.2E-17 3.1E-21 155.6 30.8 307 56-380 110-464 (481)
98 2dbc_A PDCL2, unnamed protein 99.8 7.7E-19 2.6E-23 139.5 12.4 102 55-160 9-120 (135)
99 2kuc_A Putative disulphide-iso 99.8 9.1E-19 3.1E-23 138.4 11.2 105 59-163 9-123 (130)
100 1a8l_A Protein disulfide oxido 99.8 3E-18 1E-22 149.0 13.9 103 58-160 118-225 (226)
101 3fk8_A Disulphide isomerase; A 99.8 1.9E-18 6.5E-23 137.1 10.6 93 68-160 24-132 (133)
102 2yj7_A LPBCA thioredoxin; oxid 99.6 3E-20 1E-24 141.2 0.0 102 58-159 3-105 (106)
103 2c0g_A ERP29 homolog, windbeut 99.8 9.8E-18 3.4E-22 145.5 14.5 119 55-178 15-149 (248)
104 2fwh_A Thiol:disulfide interch 99.8 2.8E-18 9.5E-23 136.2 9.9 100 61-161 17-128 (134)
105 3iv4_A Putative oxidoreductase 99.7 1.2E-17 4.1E-22 124.3 10.4 98 57-156 7-111 (112)
106 2djk_A PDI, protein disulfide- 99.7 1.1E-17 3.7E-22 132.5 10.3 123 262-390 2-130 (133)
107 1a0r_P Phosducin, MEKA, PP33; 99.7 1.5E-17 5.1E-22 144.2 11.3 105 54-160 110-225 (245)
108 1fo5_A Thioredoxin; disulfide 99.7 6E-18 2E-22 122.9 7.4 83 74-160 3-85 (85)
109 2trc_P Phosducin, MEKA, PP33; 99.7 6.1E-18 2.1E-22 144.9 8.6 103 55-159 98-211 (217)
110 2qc7_A ERP31, ERP28, endoplasm 99.7 5E-17 1.7E-21 140.6 14.3 101 56-160 5-118 (240)
111 3f9u_A Putative exported cytoc 99.7 5.5E-18 1.9E-22 140.7 8.0 101 60-160 30-165 (172)
112 1nho_A Probable thioredoxin; b 99.7 8.3E-18 2.8E-22 122.1 7.3 82 75-160 3-84 (85)
113 2b5x_A YKUV protein, TRXY; thi 99.7 7.9E-17 2.7E-21 130.0 13.8 103 59-161 15-145 (148)
114 1wmj_A Thioredoxin H-type; str 99.7 1.1E-18 3.6E-23 137.9 2.1 105 56-162 14-123 (130)
115 1lu4_A Soluble secreted antige 99.7 3.3E-17 1.1E-21 130.2 10.4 101 58-160 9-135 (136)
116 1wou_A Thioredoxin -related pr 99.7 2.2E-17 7.5E-22 128.9 9.0 101 57-158 6-122 (123)
117 2ju5_A Thioredoxin disulfide i 99.7 5.8E-17 2E-21 131.8 11.4 97 64-161 38-152 (154)
118 2djk_A PDI, protein disulfide- 99.7 4.3E-17 1.5E-21 129.0 10.2 106 57-164 7-118 (133)
119 1zzo_A RV1677; thioredoxin fol 99.7 7.3E-17 2.5E-21 128.2 11.1 102 57-160 9-134 (136)
120 3dml_A Putative uncharacterize 99.7 1.1E-17 3.9E-22 126.4 5.8 89 72-160 17-109 (116)
121 3or5_A Thiol:disulfide interch 99.7 1.5E-16 5.1E-21 131.0 12.0 105 57-161 18-151 (165)
122 2lst_A Thioredoxin; structural 99.5 1.8E-18 6.3E-23 136.6 0.0 99 63-161 9-116 (130)
123 3lor_A Thiol-disulfide isomera 99.7 3.6E-16 1.2E-20 128.0 13.4 102 61-162 18-156 (160)
124 3kp8_A Vkorc1/thioredoxin doma 99.7 2.5E-17 8.7E-22 124.4 5.8 77 71-158 10-92 (106)
125 3qcp_A QSOX from trypanosoma b 99.7 8.7E-18 3E-22 157.8 3.6 97 55-151 22-130 (470)
126 4f9z_D Endoplasmic reticulum r 99.7 5.9E-15 2E-19 128.0 21.2 196 57-262 10-222 (227)
127 2f9s_A Thiol-disulfide oxidore 99.7 1.6E-16 5.6E-21 128.8 10.6 92 72-163 25-140 (151)
128 2ywm_A Glutaredoxin-like prote 99.7 1.9E-16 6.6E-21 137.8 11.5 101 57-161 119-220 (229)
129 3eyt_A Uncharacterized protein 99.7 3E-16 1E-20 128.2 11.8 92 71-162 26-153 (158)
130 2h30_A Thioredoxin, peptide me 99.7 1.8E-16 6.3E-21 130.3 10.5 105 57-161 22-156 (164)
131 3raz_A Thioredoxin-related pro 99.7 2E-16 6.8E-21 128.3 10.5 93 71-163 22-142 (151)
132 3erw_A Sporulation thiol-disul 99.7 1.7E-16 5.8E-21 127.6 8.6 85 72-156 33-144 (145)
133 1sen_A Thioredoxin-like protei 99.7 3.2E-17 1.1E-21 134.6 4.2 97 64-160 37-147 (164)
134 2hls_A Protein disulfide oxido 99.7 1E-15 3.4E-20 134.0 13.8 100 61-164 125-229 (243)
135 2lja_A Putative thiol-disulfid 99.7 2.7E-16 9.3E-21 127.6 9.1 106 58-163 15-145 (152)
136 3hcz_A Possible thiol-disulfid 99.7 2.1E-16 7.1E-21 127.5 8.2 103 58-160 16-145 (148)
137 2b5e_A Protein disulfide-isome 99.7 2.1E-14 7.1E-19 139.8 23.8 297 57-380 124-470 (504)
138 3ia1_A THIO-disulfide isomeras 99.6 5.5E-16 1.9E-20 126.1 10.6 104 58-164 16-147 (154)
139 2l5o_A Putative thioredoxin; s 99.6 7E-16 2.4E-20 125.3 10.2 104 58-161 13-141 (153)
140 3eur_A Uncharacterized protein 99.6 5.6E-16 1.9E-20 124.2 9.5 98 58-158 16-142 (142)
141 4evm_A Thioredoxin family prot 99.6 1E-15 3.6E-20 121.5 10.0 89 71-159 20-137 (138)
142 3gl3_A Putative thiol:disulfid 99.6 1.9E-15 6.6E-20 122.5 11.7 93 71-163 26-144 (152)
143 2lrt_A Uncharacterized protein 99.6 1.6E-15 5.3E-20 123.1 11.0 101 57-157 19-144 (152)
144 2lrn_A Thiol:disulfide interch 99.6 9.3E-16 3.2E-20 124.4 9.7 87 72-161 28-141 (152)
145 3fkf_A Thiol-disulfide oxidore 99.6 9.2E-16 3.2E-20 123.7 9.1 86 72-160 32-145 (148)
146 1ilo_A Conserved hypothetical 99.6 1.3E-15 4.6E-20 108.1 8.9 74 76-156 2-76 (77)
147 1z6n_A Hypothetical protein PA 99.6 8.9E-16 3E-20 125.6 9.0 96 60-158 40-140 (167)
148 3lwa_A Secreted thiol-disulfid 99.6 1.7E-15 5.9E-20 126.9 11.0 103 58-160 42-180 (183)
149 3ewl_A Uncharacterized conserv 99.6 7.2E-16 2.5E-20 123.5 8.3 98 60-160 14-140 (142)
150 2b1k_A Thiol:disulfide interch 99.6 1.1E-15 3.9E-20 126.1 9.2 109 46-160 24-159 (168)
151 3hdc_A Thioredoxin family prot 99.6 1.9E-15 6.3E-20 123.5 10.3 105 58-162 26-153 (158)
152 3ira_A Conserved protein; meth 99.6 7.9E-16 2.7E-20 125.9 7.8 83 60-142 26-120 (173)
153 1kng_A Thiol:disulfide interch 99.6 1.7E-15 5.8E-20 123.3 9.5 95 64-160 33-151 (156)
154 3kh7_A Thiol:disulfide interch 99.6 2.7E-15 9.1E-20 124.8 10.6 111 44-160 30-166 (176)
155 3kcm_A Thioredoxin family prot 99.6 3E-15 1E-19 121.6 9.9 103 59-161 14-143 (154)
156 3ph9_A Anterior gradient prote 99.6 1.2E-15 4E-20 122.4 7.0 95 65-160 36-144 (151)
157 3fw2_A Thiol-disulfide oxidore 99.6 6E-15 2.1E-19 119.3 11.0 100 58-160 16-147 (150)
158 3ha9_A Uncharacterized thiored 99.6 5.2E-15 1.8E-19 121.8 9.9 100 58-160 22-163 (165)
159 2hyx_A Protein DIPZ; thioredox 99.6 1.3E-14 4.5E-19 132.9 11.8 101 60-160 69-198 (352)
160 1jfu_A Thiol:disulfide interch 99.6 1.8E-14 6.1E-19 121.0 11.5 106 58-163 45-182 (186)
161 4fo5_A Thioredoxin-like protei 99.6 7.2E-15 2.5E-19 117.8 8.5 84 71-157 30-141 (143)
162 1sji_A Calsequestrin 2, calseq 99.6 1.2E-13 4.1E-18 127.9 17.7 198 164-380 13-228 (350)
163 3ed3_A Protein disulfide-isome 99.5 4.9E-13 1.7E-17 120.5 20.2 204 162-378 17-268 (298)
164 2ywi_A Hypothetical conserved 99.5 1.5E-14 5.1E-19 122.6 9.7 103 60-162 32-175 (196)
165 3us3_A Calsequestrin-1; calciu 99.5 1.5E-13 5.2E-18 127.8 16.8 199 163-380 14-230 (367)
166 2cvb_A Probable thiol-disulfid 99.5 1.8E-14 6.1E-19 121.2 9.2 103 60-162 20-160 (188)
167 1i5g_A Tryparedoxin II; electr 99.5 2.2E-14 7.6E-19 115.1 9.3 87 57-143 12-126 (144)
168 3s9f_A Tryparedoxin; thioredox 99.5 2E-14 7E-19 118.1 8.8 85 58-143 34-146 (165)
169 2fgx_A Putative thioredoxin; N 99.5 2.9E-14 9.8E-19 106.3 8.2 77 75-156 30-106 (107)
170 1o8x_A Tryparedoxin, TRYX, TXN 99.5 2.4E-14 8.2E-19 115.2 7.9 85 58-143 14-126 (146)
171 1ttz_A Conserved hypothetical 99.5 2.6E-14 8.8E-19 103.0 6.9 74 77-160 3-76 (87)
172 1o73_A Tryparedoxin; electron 99.5 5.4E-14 1.8E-18 112.8 8.6 73 71-143 26-126 (144)
173 3u5r_E Uncharacterized protein 99.5 9.7E-14 3.3E-18 119.5 10.7 106 57-162 42-188 (218)
174 3drn_A Peroxiredoxin, bacterio 99.5 1.2E-13 4.1E-18 113.0 10.6 90 58-147 13-131 (161)
175 2ggt_A SCO1 protein homolog, m 99.5 8.1E-14 2.8E-18 114.4 9.0 89 72-160 22-160 (164)
176 2rli_A SCO2 protein homolog, m 99.5 1E-13 3.5E-18 114.6 9.7 90 72-161 25-164 (171)
177 2vup_A Glutathione peroxidase- 99.5 1.7E-13 5.8E-18 115.4 10.6 105 57-161 32-185 (190)
178 2v1m_A Glutathione peroxidase; 99.5 1.2E-13 4E-18 114.0 8.7 103 58-160 16-166 (169)
179 3cmi_A Peroxiredoxin HYR1; thi 99.5 8.4E-14 2.9E-18 115.2 7.7 102 59-161 18-168 (171)
180 2h8l_A Protein disulfide-isome 99.5 5.4E-12 1.8E-16 111.1 19.6 197 57-264 7-229 (252)
181 2p5q_A Glutathione peroxidase 99.5 1.1E-13 3.9E-18 114.2 7.9 104 58-161 17-168 (170)
182 2ls5_A Uncharacterized protein 99.2 5.7E-15 1.9E-19 120.7 0.0 102 58-160 18-147 (159)
183 3dwv_A Glutathione peroxidase- 99.4 3.4E-13 1.2E-17 113.2 10.0 105 57-161 30-183 (187)
184 2p31_A CL683, glutathione pero 99.4 1.2E-13 4.3E-18 115.2 6.9 103 58-160 34-180 (181)
185 2f8a_A Glutathione peroxidase 99.4 2.7E-13 9.2E-18 115.6 8.0 90 71-160 45-206 (208)
186 2k6v_A Putative cytochrome C o 99.4 1.5E-13 5.1E-18 113.7 6.2 88 72-159 34-171 (172)
187 1xvw_A Hypothetical protein RV 99.4 5.1E-13 1.8E-17 109.1 8.8 100 59-158 21-157 (160)
188 3kij_A Probable glutathione pe 99.4 6E-13 2.1E-17 111.0 9.1 104 57-160 22-169 (180)
189 2obi_A PHGPX, GPX-4, phospholi 99.4 3.3E-13 1.1E-17 112.9 7.3 102 58-159 32-182 (183)
190 1we0_A Alkyl hydroperoxide red 99.4 3.2E-13 1.1E-17 113.4 7.2 89 72-160 30-156 (187)
191 2gs3_A PHGPX, GPX-4, phospholi 99.4 4E-13 1.4E-17 112.6 7.5 102 58-159 34-184 (185)
192 2lus_A Thioredoxion; CR-Trp16, 99.1 2.5E-14 8.5E-19 114.6 0.0 86 58-143 9-125 (143)
193 1zof_A Alkyl hydroperoxide-red 99.4 3.4E-13 1.2E-17 114.4 6.9 89 72-160 32-160 (198)
194 2bmx_A Alkyl hydroperoxidase C 99.4 7.4E-13 2.5E-17 111.9 8.7 90 72-161 44-170 (195)
195 2dlx_A UBX domain-containing p 99.4 1.8E-12 6.1E-17 103.9 10.3 90 70-160 39-135 (153)
196 3ec3_A Protein disulfide-isome 99.4 8E-11 2.7E-15 103.4 21.5 196 57-264 7-227 (250)
197 3kp9_A Vkorc1/thioredoxin doma 99.4 1.8E-12 6.1E-17 114.5 10.0 82 65-159 191-278 (291)
198 2r2j_A Thioredoxin domain-cont 99.4 1.6E-11 5.5E-16 114.9 16.2 199 163-380 6-221 (382)
199 2e7p_A Glutaredoxin; thioredox 99.3 3.9E-13 1.3E-17 103.4 3.9 87 65-159 12-106 (116)
200 1qmv_A Human thioredoxin perox 99.3 3.8E-12 1.3E-16 107.7 9.7 89 72-160 33-162 (197)
201 2jsy_A Probable thiol peroxida 99.3 7.4E-12 2.5E-16 103.0 10.9 102 58-160 29-166 (167)
202 2i3y_A Epididymal secretory gl 99.3 1.1E-11 3.8E-16 105.7 10.6 104 57-161 39-211 (215)
203 1uul_A Tryparedoxin peroxidase 99.3 5.5E-12 1.9E-16 107.2 8.5 89 72-160 35-164 (202)
204 1zye_A Thioredoxin-dependent p 99.3 3.8E-12 1.3E-16 109.5 7.5 89 72-160 55-184 (220)
205 1nm3_A Protein HI0572; hybrid, 99.3 6E-11 2.1E-15 103.7 15.3 143 72-235 32-224 (241)
206 2i81_A 2-Cys peroxiredoxin; st 99.3 7.1E-12 2.4E-16 107.2 8.9 89 72-160 51-179 (213)
207 2h01_A 2-Cys peroxiredoxin; th 99.3 4.4E-12 1.5E-16 106.8 7.5 89 72-160 30-158 (192)
208 1xzo_A BSSCO, hypothetical pro 99.3 8.5E-12 2.9E-16 103.3 8.9 103 59-161 19-172 (174)
209 2b7k_A SCO1 protein; metalloch 99.3 9.6E-12 3.3E-16 105.4 9.4 104 57-160 25-178 (200)
210 2l4c_A Endoplasmic reticulum r 99.3 1E-11 3.4E-16 95.8 8.3 103 158-264 15-123 (124)
211 3gkn_A Bacterioferritin comigr 99.3 1E-11 3.5E-16 101.6 8.7 101 58-158 20-159 (163)
212 1wjk_A C330018D20RIK protein; 99.3 1E-11 3.5E-16 92.4 7.4 80 72-160 14-95 (100)
213 3ztl_A Thioredoxin peroxidase; 99.3 1.1E-11 3.6E-16 106.9 8.1 87 72-158 68-195 (222)
214 1xvq_A Thiol peroxidase; thior 99.2 1.2E-11 4E-16 102.5 7.5 84 72-157 43-161 (175)
215 2r37_A Glutathione peroxidase 99.2 1.8E-11 6.2E-16 103.9 8.8 102 58-160 22-192 (207)
216 4g2e_A Peroxiredoxin; redox pr 99.2 4.5E-12 1.5E-16 103.0 4.5 109 47-158 7-155 (157)
217 1hyu_A AHPF, alkyl hydroperoxi 99.2 5.8E-11 2E-15 115.7 13.0 96 59-159 102-198 (521)
218 2k8s_A Thioredoxin; dimer, str 99.2 8.7E-12 3E-16 88.8 4.5 63 76-140 3-66 (80)
219 4gqc_A Thiol peroxidase, perox 99.2 1.3E-11 4.5E-16 101.0 4.7 111 47-160 8-159 (164)
220 2c0d_A Thioredoxin peroxidase 99.2 4.7E-11 1.6E-15 102.5 8.4 89 72-160 55-183 (221)
221 1ego_A Glutaredoxin; electron 99.2 7.9E-11 2.7E-15 84.8 8.3 76 76-160 2-83 (85)
222 3me7_A Putative uncharacterize 99.2 1.4E-10 4.9E-15 95.4 10.5 105 58-162 13-163 (170)
223 2a4v_A Peroxiredoxin DOT5; yea 99.2 9.1E-11 3.1E-15 95.5 9.1 77 73-151 35-141 (159)
224 1n8j_A AHPC, alkyl hydroperoxi 99.2 1.4E-10 4.7E-15 97.0 10.1 89 72-160 29-155 (186)
225 1psq_A Probable thiol peroxida 99.1 1.3E-10 4.6E-15 94.9 9.2 99 59-158 28-162 (163)
226 3ixr_A Bacterioferritin comigr 99.1 2.1E-10 7E-15 95.3 9.6 102 57-158 35-175 (179)
227 2pn8_A Peroxiredoxin-4; thiore 99.1 1.4E-10 4.8E-15 99.0 8.1 89 72-160 47-176 (211)
228 1eej_A Thiol:disulfide interch 99.1 2.3E-10 7.8E-15 98.0 8.7 82 72-160 85-210 (216)
229 3qpm_A Peroxiredoxin; oxidored 99.1 2.2E-10 7.6E-15 99.6 8.6 88 72-159 76-204 (240)
230 3gyk_A 27KDA outer membrane pr 99.1 6.3E-10 2.1E-14 92.1 10.3 83 72-160 21-172 (175)
231 3a2v_A Probable peroxiredoxin; 99.1 2.9E-10 1E-14 98.7 8.3 94 67-160 27-161 (249)
232 2yzh_A Probable thiol peroxida 99.1 2.1E-10 7.3E-15 94.5 6.9 86 72-159 46-170 (171)
233 3p7x_A Probable thiol peroxida 99.0 3.5E-10 1.2E-14 92.7 7.8 108 46-158 22-165 (166)
234 1q98_A Thiol peroxidase, TPX; 99.0 4.3E-10 1.5E-14 92.1 8.0 85 60-145 30-148 (165)
235 2wfc_A Peroxiredoxin 5, PRDX5; 99.0 6.1E-10 2.1E-14 91.2 8.8 75 72-146 30-142 (167)
236 3uma_A Hypothetical peroxiredo 99.0 1.1E-09 3.9E-14 90.9 9.3 86 72-157 55-182 (184)
237 3tjj_A Peroxiredoxin-4; thiore 99.0 4.5E-10 1.6E-14 98.3 6.7 87 72-158 90-217 (254)
238 4hde_A SCO1/SENC family lipopr 99.0 2.3E-09 8E-14 88.1 10.6 104 57-160 16-169 (170)
239 1tp9_A Peroxiredoxin, PRX D (t 99.0 1.5E-09 5E-14 88.6 9.1 75 72-146 34-146 (162)
240 3mng_A Peroxiredoxin-5, mitoch 99.0 1.5E-09 5E-14 89.3 9.0 98 60-157 29-171 (173)
241 1t3b_A Thiol:disulfide interch 99.0 1.2E-09 4E-14 93.2 8.0 80 72-158 85-208 (211)
242 3zrd_A Thiol peroxidase; oxido 99.0 1.8E-09 6.1E-14 91.2 9.0 97 45-145 53-183 (200)
243 2pwj_A Mitochondrial peroxired 99.0 2.4E-09 8.3E-14 88.0 9.4 76 71-146 42-154 (171)
244 2l4c_A Endoplasmic reticulum r 98.9 3.9E-08 1.3E-12 75.6 12.8 95 57-159 22-122 (124)
245 3h93_A Thiol:disulfide interch 98.9 6.9E-09 2.3E-13 87.1 9.2 87 72-160 24-183 (192)
246 3q6o_A Sulfhydryl oxidase 1; p 98.9 1.3E-07 4.3E-12 82.6 17.6 198 162-376 12-239 (244)
247 1h75_A Glutaredoxin-like prote 98.9 3E-09 1E-13 75.6 5.8 71 77-159 3-76 (81)
248 1v58_A Thiol:disulfide interch 98.9 1.1E-08 3.6E-13 89.1 10.4 85 73-160 97-232 (241)
249 1prx_A HORF6; peroxiredoxin, h 98.9 1.8E-08 6E-13 86.6 11.5 86 75-160 34-168 (224)
250 1r7h_A NRDH-redoxin; thioredox 98.8 1.7E-08 5.9E-13 70.4 8.8 68 77-156 3-73 (75)
251 2v2g_A Peroxiredoxin 6; oxidor 98.8 1.6E-08 5.4E-13 87.2 9.5 86 74-159 30-163 (233)
252 3hd5_A Thiol:disulfide interch 98.8 1.6E-08 5.5E-13 85.1 9.0 43 72-114 24-66 (195)
253 1xcc_A 1-Cys peroxiredoxin; un 98.8 1.4E-08 4.8E-13 86.9 8.7 85 75-159 34-164 (220)
254 1kte_A Thioltransferase; redox 98.8 4.7E-09 1.6E-13 78.7 4.9 70 65-141 4-80 (105)
255 3t58_A Sulfhydryl oxidase 1; o 98.7 3.8E-07 1.3E-11 88.0 17.8 181 163-359 13-221 (519)
256 3zzx_A Thioredoxin; oxidoreduc 98.7 3.9E-08 1.3E-12 73.5 8.1 96 164-264 2-105 (105)
257 2cq9_A GLRX2 protein, glutared 98.7 1.9E-08 6.4E-13 78.5 6.0 87 63-159 17-113 (130)
258 3keb_A Probable thiol peroxida 98.7 8.2E-08 2.8E-12 81.5 9.5 109 45-160 23-175 (224)
259 2hze_A Glutaredoxin-1; thiored 98.6 6.9E-09 2.3E-13 79.1 1.3 62 75-141 19-87 (114)
260 2ht9_A Glutaredoxin-2; thiored 98.6 3.9E-08 1.3E-12 78.1 4.9 86 63-158 39-134 (146)
261 3hz8_A Thiol:disulfide interch 98.5 5.3E-07 1.8E-11 75.5 10.1 42 72-113 23-64 (193)
262 3ga4_A Dolichyl-diphosphooligo 98.5 1.1E-06 3.9E-11 71.6 11.5 117 256-380 8-156 (178)
263 2znm_A Thiol:disulfide interch 98.5 3.4E-07 1.2E-11 76.8 8.6 42 72-113 21-62 (195)
264 2qc7_A ERP31, ERP28, endoplasm 98.5 8.5E-07 2.9E-11 76.5 10.9 97 163-264 6-118 (240)
265 3h79_A Thioredoxin-like protei 98.5 1.1E-06 3.6E-11 68.1 10.5 99 161-263 14-126 (127)
266 3sbc_A Peroxiredoxin TSA1; alp 98.5 3.9E-07 1.3E-11 76.7 7.9 110 45-159 24-179 (216)
267 3ic4_A Glutaredoxin (GRX-1); s 98.4 5E-07 1.7E-11 65.6 7.3 70 76-157 13-91 (92)
268 3gv1_A Disulfide interchange p 98.4 4.1E-07 1.4E-11 72.2 7.2 81 72-161 13-139 (147)
269 1z6m_A Conserved hypothetical 98.4 1.5E-06 5.3E-11 71.4 10.5 81 72-157 26-174 (175)
270 3tco_A Thioredoxin (TRXA-1); d 98.4 6.5E-07 2.2E-11 67.1 7.4 104 265-376 3-108 (109)
271 2dml_A Protein disulfide-isome 98.4 1.9E-06 6.4E-11 67.0 10.1 103 267-377 18-124 (130)
272 3c1r_A Glutaredoxin-1; oxidize 98.4 3.2E-07 1.1E-11 70.0 5.2 70 64-140 16-93 (118)
273 1x5e_A Thioredoxin domain cont 98.4 1.4E-06 4.6E-11 67.4 8.8 105 266-380 7-113 (126)
274 3hxs_A Thioredoxin, TRXP; elec 98.4 1.2E-06 4.2E-11 69.1 8.8 88 283-378 51-140 (141)
275 3die_A Thioredoxin, TRX; elect 98.4 1.1E-06 3.8E-11 65.4 8.0 101 267-376 4-106 (106)
276 3gnj_A Thioredoxin domain prot 98.4 7.8E-07 2.7E-11 66.9 7.0 102 268-377 6-110 (111)
277 4f82_A Thioredoxin reductase; 98.4 2E-06 6.9E-11 70.0 9.6 81 66-146 41-158 (176)
278 3hz4_A Thioredoxin; NYSGXRC, P 98.4 5.3E-07 1.8E-11 71.3 5.9 115 266-388 6-125 (140)
279 2yan_A Glutaredoxin-3; oxidore 98.4 1.1E-06 3.9E-11 65.5 7.4 67 64-140 8-83 (105)
280 4dvc_A Thiol:disulfide interch 98.4 2.1E-06 7.4E-11 71.0 10.0 87 72-160 20-181 (184)
281 1thx_A Thioredoxin, thioredoxi 98.3 2.7E-06 9.3E-11 64.3 9.7 104 267-378 8-114 (115)
282 2o8v_B Thioredoxin 1; disulfid 98.3 2.4E-06 8.2E-11 66.3 9.5 102 268-377 24-128 (128)
283 2trx_A Thioredoxin; electron t 98.3 4.8E-06 1.6E-10 62.2 10.8 102 267-376 3-107 (108)
284 2c0g_A ERP29 homolog, windbeut 98.3 2.1E-06 7.3E-11 74.2 9.9 98 162-265 16-132 (248)
285 3l9v_A Putative thiol-disulfid 98.3 7.3E-07 2.5E-11 74.4 6.8 41 73-113 14-57 (189)
286 2klx_A Glutaredoxin; thioredox 98.3 8.2E-07 2.8E-11 64.0 6.2 56 76-139 7-65 (89)
287 3feu_A Putative lipoprotein; a 98.3 1.1E-06 3.7E-11 73.0 7.6 84 73-160 22-183 (185)
288 2rem_A Disulfide oxidoreductas 98.3 3.8E-06 1.3E-10 70.2 11.1 41 73-113 25-65 (193)
289 1un2_A DSBA, thiol-disulfide i 98.3 1.9E-07 6.5E-12 78.3 2.8 45 72-116 112-159 (197)
290 1v98_A Thioredoxin; oxidoreduc 98.3 2.2E-06 7.5E-11 67.6 8.8 106 266-379 33-140 (140)
291 2lqo_A Putative glutaredoxin R 98.3 2.6E-06 8.9E-11 61.4 8.2 76 76-162 5-85 (92)
292 2djj_A PDI, protein disulfide- 98.3 8E-06 2.8E-10 62.4 11.7 103 266-379 7-119 (121)
293 3p2a_A Thioredoxin 2, putative 98.3 2.4E-06 8.3E-11 68.0 9.0 104 267-378 39-144 (148)
294 2yzu_A Thioredoxin; redox prot 98.3 2E-06 6.7E-11 64.3 8.0 103 268-378 3-107 (109)
295 2l5l_A Thioredoxin; structural 98.3 2.4E-06 8.3E-11 67.0 8.8 103 268-378 11-127 (136)
296 2voc_A Thioredoxin; electron t 98.3 2.4E-06 8E-11 64.5 8.2 102 268-378 3-106 (112)
297 2ec4_A FAS-associated factor 1 98.3 6.5E-06 2.2E-10 67.3 11.1 90 71-160 53-167 (178)
298 3nzn_A Glutaredoxin; structura 98.3 3.4E-06 1.2E-10 62.6 8.6 72 74-156 21-101 (103)
299 2dj3_A Protein disulfide-isome 98.3 9.5E-06 3.3E-10 63.1 11.6 108 265-380 6-121 (133)
300 1mek_A Protein disulfide isome 98.3 2.4E-06 8.2E-11 65.1 7.9 107 267-378 8-118 (120)
301 1nsw_A Thioredoxin, TRX; therm 98.3 2.5E-06 8.6E-11 63.4 7.8 101 268-376 2-104 (105)
302 1fov_A Glutaredoxin 3, GRX3; a 98.3 3.1E-06 1.1E-10 59.8 7.8 68 77-158 3-74 (82)
303 2ppt_A Thioredoxin-2; thiredox 98.3 2.5E-06 8.7E-11 68.6 8.0 104 268-379 49-154 (155)
304 1dby_A Chloroplast thioredoxin 98.3 2.8E-06 9.6E-11 63.4 7.7 102 268-377 3-107 (107)
305 2i4a_A Thioredoxin; acidophIle 98.2 7.7E-06 2.6E-10 60.8 10.1 101 267-375 3-106 (107)
306 1x5d_A Protein disulfide-isome 98.2 3.7E-06 1.3E-10 65.5 8.5 105 267-379 8-119 (133)
307 4eo3_A Bacterioferritin comigr 98.2 2.9E-06 9.8E-11 76.8 8.9 100 58-160 9-138 (322)
308 3qfa_C Thioredoxin; protein-pr 98.2 7.2E-06 2.5E-10 62.3 9.9 96 162-262 11-114 (116)
309 1fb6_A Thioredoxin M; electron 98.2 3.3E-06 1.1E-10 62.6 7.8 101 268-376 2-105 (105)
310 3qmx_A Glutaredoxin A, glutare 98.2 3.6E-06 1.2E-10 61.9 7.6 59 73-139 14-77 (99)
311 2qsi_A Putative hydrogenase ex 98.2 3.5E-06 1.2E-10 65.3 7.7 100 269-376 18-122 (137)
312 2wz9_A Glutaredoxin-3; protein 98.2 4E-06 1.4E-10 67.2 8.4 114 161-279 11-139 (153)
313 2qgv_A Hydrogenase-1 operon pr 98.2 6.3E-06 2.1E-10 64.1 9.0 103 157-264 12-124 (140)
314 1w4v_A Thioredoxin, mitochondr 98.2 3E-06 1E-10 64.7 7.3 103 266-376 13-118 (119)
315 3aps_A DNAJ homolog subfamily 98.2 2E-06 7E-11 65.9 6.3 103 268-378 5-114 (122)
316 1t00_A Thioredoxin, TRX; redox 98.2 4.8E-06 1.6E-10 62.7 8.2 103 267-377 6-111 (112)
317 3rhb_A ATGRXC5, glutaredoxin-C 98.2 3.1E-06 1.1E-10 64.0 7.0 67 64-140 10-84 (113)
318 2dj1_A Protein disulfide-isome 98.2 3.9E-06 1.3E-10 66.0 7.9 108 267-380 18-127 (140)
319 3m9j_A Thioredoxin; oxidoreduc 98.2 5.4E-06 1.8E-10 61.5 8.2 94 164-262 2-103 (105)
320 1r26_A Thioredoxin; redox-acti 98.2 8.1E-06 2.8E-10 62.9 9.0 94 164-262 21-120 (125)
321 3uvt_A Thioredoxin domain-cont 98.2 4.7E-06 1.6E-10 62.5 7.5 104 267-375 6-110 (111)
322 3msz_A Glutaredoxin 1; alpha-b 98.2 9.9E-06 3.4E-10 58.1 8.9 74 75-160 4-86 (89)
323 2oe3_A Thioredoxin-3; electron 98.2 8.7E-06 3E-10 61.6 9.0 96 162-262 12-113 (114)
324 1ep7_A Thioredoxin CH1, H-type 98.2 6.6E-06 2.3E-10 61.8 8.3 96 162-262 2-108 (112)
325 4euy_A Uncharacterized protein 98.2 6E-06 2.1E-10 61.4 7.7 96 272-376 7-104 (105)
326 3bj5_A Protein disulfide-isome 98.2 4.8E-05 1.6E-09 60.2 13.3 110 56-165 14-131 (147)
327 3dxb_A Thioredoxin N-terminall 98.2 8.1E-06 2.8E-10 69.9 9.5 107 266-380 12-121 (222)
328 2l6c_A Thioredoxin; oxidoreduc 98.2 1.7E-05 5.7E-10 59.6 10.1 97 165-266 5-107 (110)
329 2khp_A Glutaredoxin; thioredox 98.1 5.9E-06 2E-10 59.8 7.2 56 76-139 7-66 (92)
330 2i1u_A Thioredoxin, TRX, MPT46 98.1 6.2E-06 2.1E-10 63.0 7.7 106 265-378 11-119 (121)
331 3f3q_A Thioredoxin-1; His TAG, 98.1 1.1E-05 3.9E-10 60.4 8.8 95 164-263 8-108 (109)
332 2vim_A Thioredoxin, TRX; thior 98.1 1.2E-05 4E-10 59.5 8.7 93 165-262 2-102 (104)
333 2e0q_A Thioredoxin; electron t 98.1 9.1E-06 3.1E-10 60.0 8.1 101 268-377 1-103 (104)
334 2j23_A Thioredoxin; immune pro 98.1 1.3E-05 4.4E-10 61.3 9.1 97 162-263 15-119 (121)
335 1gh2_A Thioredoxin-like protei 98.1 1E-05 3.5E-10 60.3 8.3 95 163-262 2-104 (107)
336 3tue_A Tryparedoxin peroxidase 98.1 1.8E-05 6.2E-10 66.7 10.5 111 44-159 26-183 (219)
337 3apq_A DNAJ homolog subfamily 98.1 7.7E-06 2.6E-10 69.4 8.4 107 266-380 97-205 (210)
338 1syr_A Thioredoxin; SGPP, stru 98.1 1.7E-05 5.8E-10 59.7 9.0 97 162-263 8-110 (112)
339 1oaz_A Thioredoxin 1; immune s 98.1 1.3E-05 4.4E-10 61.6 8.3 96 163-263 4-121 (123)
340 2av4_A Thioredoxin-like protei 98.1 1.1E-05 3.8E-10 63.6 7.9 102 268-378 23-140 (160)
341 3l9s_A Thiol:disulfide interch 98.1 7.5E-06 2.6E-10 68.2 7.3 41 73-113 21-64 (191)
342 1xwb_A Thioredoxin; dimerizati 98.1 1.9E-05 6.5E-10 58.5 8.6 100 268-376 2-106 (106)
343 3ul3_B Thioredoxin, thioredoxi 98.1 1.1E-05 3.6E-10 62.5 7.4 102 265-374 24-127 (128)
344 3d6i_A Monothiol glutaredoxin- 98.0 2.9E-05 9.9E-10 58.3 9.6 94 164-262 2-106 (112)
345 2es7_A Q8ZP25_salty, putative 98.0 6.8E-06 2.3E-10 64.8 6.2 105 267-380 18-128 (142)
346 3h8q_A Thioredoxin reductase 3 98.0 1.1E-05 3.6E-10 61.1 6.9 66 64-139 8-80 (114)
347 2l57_A Uncharacterized protein 98.0 2E-05 7E-10 60.6 8.2 102 269-378 7-118 (126)
348 1xfl_A Thioredoxin H1; AT3G510 97.9 3.9E-05 1.3E-09 58.9 8.8 96 162-262 16-121 (124)
349 3iv4_A Putative oxidoreductase 97.9 1.8E-05 6.3E-10 58.6 6.3 96 162-260 6-111 (112)
350 1fo5_A Thioredoxin; disulfide 97.9 7.5E-05 2.6E-09 52.7 9.5 79 286-376 6-85 (85)
351 3qou_A Protein YBBN; thioredox 97.9 2.7E-05 9.2E-10 69.4 8.5 107 265-379 6-116 (287)
352 2fwh_A Thiol:disulfide interch 97.9 8.1E-05 2.8E-09 58.0 10.2 100 161-263 10-126 (134)
353 2vlu_A Thioredoxin, thioredoxi 97.9 2E-05 6.9E-10 60.2 6.5 104 265-378 12-121 (122)
354 2pu9_C TRX-F, thioredoxin F-ty 97.9 5.2E-05 1.8E-09 56.8 8.7 103 266-377 5-111 (111)
355 3evi_A Phosducin-like protein 97.9 3.1E-05 1.1E-09 58.8 7.0 96 163-263 4-112 (118)
356 2xc2_A Thioredoxinn; oxidoredu 97.9 2.8E-05 9.7E-10 58.9 6.8 98 268-376 15-117 (117)
357 3gix_A Thioredoxin-like protei 97.9 6.7E-05 2.3E-09 59.6 9.3 95 164-262 5-118 (149)
358 1zma_A Bacterocin transport ac 97.9 6.3E-05 2.2E-09 57.1 8.6 95 163-262 13-118 (118)
359 1ti3_A Thioredoxin H, PTTRXH1; 97.9 3.7E-05 1.3E-09 57.7 7.2 96 162-262 4-109 (113)
360 3ctg_A Glutaredoxin-2; reduced 97.9 8.7E-06 3E-10 63.0 3.5 70 64-140 28-105 (129)
361 2vm1_A Thioredoxin, thioredoxi 97.8 6.4E-05 2.2E-09 56.9 8.3 97 162-263 6-112 (118)
362 1nho_A Probable thioredoxin; b 97.8 6.2E-05 2.1E-09 53.2 7.3 79 286-376 5-84 (85)
363 1wik_A Thioredoxin-like protei 97.8 4.3E-05 1.5E-09 57.2 6.7 66 64-139 6-80 (109)
364 1faa_A Thioredoxin F; electron 97.7 8.2E-05 2.8E-09 56.9 7.5 104 265-377 17-124 (124)
365 3d22_A TRXH4, thioredoxin H-ty 97.7 9E-05 3.1E-09 58.0 7.6 98 161-263 23-130 (139)
366 3gha_A Disulfide bond formatio 97.7 0.0003 1E-08 58.9 10.7 87 72-163 28-194 (202)
367 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.0019 6.6E-08 62.5 17.8 171 73-263 18-198 (521)
368 2yj7_A LPBCA thioredoxin; oxid 96.8 6.7E-06 2.3E-10 60.9 0.0 100 268-375 3-105 (106)
369 2f51_A Thioredoxin; electron t 97.6 0.00012 4.1E-09 55.5 7.1 101 162-266 3-114 (118)
370 1wmj_A Thioredoxin H-type; str 97.6 7.8E-05 2.7E-09 57.5 5.7 98 162-264 14-121 (130)
371 2dbc_A PDCL2, unnamed protein 97.6 0.00017 6E-09 56.1 7.2 98 162-264 10-120 (135)
372 2dj0_A Thioredoxin-related tra 97.5 8.7E-05 3E-09 58.0 5.1 98 163-262 8-118 (137)
373 1qgv_A Spliceosomal protein U5 97.5 0.00037 1.3E-08 54.8 8.7 98 273-379 11-123 (142)
374 2trc_P Phosducin, MEKA, PP33; 97.5 0.0002 6.8E-09 60.7 7.6 98 163-264 100-212 (217)
375 3cxg_A Putative thioredoxin; m 97.5 0.00039 1.3E-08 53.9 8.3 96 163-263 21-127 (133)
376 3f4s_A Alpha-DSBA1, putative u 97.5 0.00066 2.3E-08 57.9 10.3 91 72-162 38-212 (226)
377 2kuc_A Putative disulphide-iso 97.4 0.00019 6.6E-09 55.3 5.8 103 271-379 11-123 (130)
378 1a0r_P Phosducin, MEKA, PP33; 97.4 0.0012 4.1E-08 56.9 10.8 98 163-264 113-225 (245)
379 3emx_A Thioredoxin; structural 97.4 0.00055 1.9E-08 53.2 7.6 96 163-266 17-127 (135)
380 3l4n_A Monothiol glutaredoxin- 97.3 0.00025 8.4E-09 54.4 5.3 70 64-138 5-79 (127)
381 1xiy_A Peroxiredoxin, pfaop; a 97.3 0.0013 4.4E-08 53.9 9.9 87 72-158 42-179 (182)
382 3fk8_A Disulphide isomerase; A 97.3 0.00051 1.7E-08 53.2 6.5 91 283-376 29-132 (133)
383 1wou_A Thioredoxin -related pr 97.3 0.00035 1.2E-08 53.4 5.4 101 267-374 6-122 (123)
384 1zzo_A RV1677; thioredoxin fol 97.2 0.0018 6E-08 49.9 9.2 90 282-377 24-135 (136)
385 2b5x_A YKUV protein, TRXY; thi 97.2 0.0017 5.8E-08 50.8 8.9 92 282-378 28-146 (148)
386 1lu4_A Soluble secreted antige 97.1 0.0052 1.8E-07 47.2 10.5 89 282-376 23-135 (136)
387 2wci_A Glutaredoxin-4; redox-a 97.0 0.00091 3.1E-08 51.8 5.4 67 64-139 26-100 (135)
388 3kp8_A Vkorc1/thioredoxin doma 96.9 0.00089 3.1E-08 49.6 4.6 73 181-262 13-92 (106)
389 3raz_A Thioredoxin-related pro 96.9 0.01 3.5E-07 46.7 11.2 97 282-380 23-143 (151)
390 3bci_A Disulfide bond protein 96.8 0.01 3.5E-07 48.7 10.9 39 72-110 10-51 (186)
391 2lst_A Thioredoxin; structural 95.9 0.00017 6E-09 55.6 0.0 93 281-379 17-118 (130)
392 3qcp_A QSOX from trypanosoma b 96.8 0.00068 2.3E-08 63.9 3.7 108 267-379 24-154 (470)
393 2lja_A Putative thiol-disulfid 96.7 0.011 3.9E-07 46.3 10.1 93 283-379 30-145 (152)
394 2f9s_A Thiol-disulfide oxidore 96.7 0.0095 3.3E-07 46.8 9.4 93 283-380 26-141 (151)
395 2ju5_A Thioredoxin disulfide i 96.7 0.0035 1.2E-07 49.8 6.8 90 283-378 47-153 (154)
396 1ilo_A Conserved hypothetical 96.7 0.0088 3E-07 40.8 8.0 69 184-260 3-76 (77)
397 1aba_A Glutaredoxin; electron 96.7 0.0047 1.6E-07 43.7 6.7 56 77-139 2-75 (87)
398 3erw_A Sporulation thiol-disul 96.6 0.0058 2E-07 47.5 7.7 86 282-373 33-145 (145)
399 1nm3_A Protein HI0572; hybrid, 96.6 0.0079 2.7E-07 51.7 9.1 58 74-139 169-229 (241)
400 3or5_A Thiol:disulfide interch 96.6 0.016 5.5E-07 46.1 10.3 95 282-380 33-154 (165)
401 3gmf_A Protein-disulfide isome 96.6 0.021 7.2E-07 47.7 11.1 36 121-161 162-197 (205)
402 2axo_A Hypothetical protein AT 96.6 0.0026 8.9E-08 55.0 5.4 80 74-160 43-142 (270)
403 2xhf_A Peroxiredoxin 5; oxidor 96.6 0.0076 2.6E-07 48.6 7.8 75 72-146 41-152 (171)
404 3zyw_A Glutaredoxin-3; metal b 96.5 0.0042 1.4E-07 46.3 5.4 64 65-138 8-80 (111)
405 3ha9_A Uncharacterized thiored 96.5 0.015 5.2E-07 46.4 9.3 90 282-378 36-165 (165)
406 3ipz_A Monothiol glutaredoxin- 96.5 0.0077 2.6E-07 44.7 6.8 65 65-139 10-83 (109)
407 2h30_A Thioredoxin, peptide me 96.4 0.0061 2.1E-07 48.7 6.4 83 179-264 37-155 (164)
408 1t1v_A SH3BGRL3, SH3 domain-bi 96.4 0.0083 2.9E-07 43.0 6.3 55 77-139 4-70 (93)
409 2ct6_A SH3 domain-binding glut 96.3 0.0096 3.3E-07 44.3 6.5 56 76-139 9-82 (111)
410 3gx8_A Monothiol glutaredoxin- 96.3 0.019 6.6E-07 43.3 8.1 66 65-139 8-84 (121)
411 2l5o_A Putative thioredoxin; s 96.2 0.028 9.5E-07 44.1 9.4 94 283-380 28-144 (153)
412 3f9u_A Putative exported cytoc 96.2 0.0091 3.1E-07 48.2 6.6 82 178-262 45-163 (172)
413 3ia1_A THIO-disulfide isomeras 96.1 0.011 3.6E-07 46.7 6.4 89 284-379 31-146 (154)
414 3lwa_A Secreted thiol-disulfid 96.1 0.03 1E-06 45.6 9.0 94 283-378 59-182 (183)
415 4evm_A Thioredoxin family prot 96.1 0.055 1.9E-06 41.1 10.2 88 283-375 22-137 (138)
416 3dml_A Putative uncharacterize 96.0 0.0084 2.9E-07 44.8 4.7 80 179-262 17-107 (116)
417 1sen_A Thioredoxin-like protei 95.9 0.0063 2.2E-07 48.9 4.3 93 281-378 44-149 (164)
418 3c7m_A Thiol:disulfide interch 95.9 0.013 4.5E-07 48.3 6.2 42 73-114 17-59 (195)
419 3fkf_A Thiol-disulfide oxidore 95.9 0.1 3.5E-06 40.3 11.1 89 283-378 33-147 (148)
420 3kzq_A Putative uncharacterize 95.9 0.11 3.6E-06 43.4 11.7 41 120-160 162-202 (208)
421 2wem_A Glutaredoxin-related pr 95.8 0.016 5.5E-07 43.6 5.8 66 64-139 11-86 (118)
422 3gl3_A Putative thiol:disulfid 95.7 0.09 3.1E-06 41.0 10.2 93 283-379 28-144 (152)
423 2lrn_A Thiol:disulfide interch 95.7 0.1 3.6E-06 40.7 10.5 91 283-380 29-144 (152)
424 3kcm_A Thioredoxin family prot 95.6 0.058 2E-06 42.2 8.7 93 282-379 27-145 (154)
425 3lor_A Thiol-disulfide isomera 95.4 0.075 2.6E-06 41.9 8.7 92 283-378 30-156 (160)
426 1jfu_A Thiol:disulfide interch 95.2 0.11 3.8E-06 42.2 9.5 95 283-380 60-183 (186)
427 3eyt_A Uncharacterized protein 95.2 0.062 2.1E-06 42.3 7.6 92 283-378 28-153 (158)
428 1kng_A Thiol:disulfide interch 95.2 0.043 1.5E-06 43.1 6.6 80 180-262 42-149 (156)
429 1t4y_A Adaptive-response senso 95.1 0.47 1.6E-05 34.0 10.8 82 76-158 13-96 (105)
430 3hcz_A Possible thiol-disulfid 95.0 0.11 3.8E-06 40.2 8.3 85 283-375 31-141 (148)
431 2ywi_A Hypothetical conserved 94.9 0.069 2.4E-06 43.9 7.3 91 286-380 49-177 (196)
432 2fgx_A Putative thioredoxin; N 94.7 0.05 1.7E-06 39.9 5.1 74 286-372 32-106 (107)
433 3ph9_A Anterior gradient prote 94.6 0.055 1.9E-06 42.6 5.6 75 173-250 37-120 (151)
434 2cvb_A Probable thiol-disulfid 94.5 0.14 4.8E-06 41.7 8.1 93 283-380 33-162 (188)
435 3hdc_A Thioredoxin family prot 94.3 0.24 8.1E-06 39.0 8.9 87 283-373 41-148 (158)
436 2in3_A Hypothetical protein; D 94.3 0.078 2.7E-06 44.4 6.3 45 116-160 165-209 (216)
437 3ira_A Conserved protein; meth 94.2 0.13 4.3E-06 41.5 7.0 84 155-241 13-115 (173)
438 2dlx_A UBX domain-containing p 94.1 0.19 6.3E-06 39.6 7.7 89 283-378 42-137 (153)
439 1ttz_A Conserved hypothetical 94.1 0.17 5.7E-06 35.5 6.6 72 184-264 3-76 (87)
440 2b1k_A Thiol:disulfide interch 93.7 0.11 3.8E-06 41.3 6.0 88 282-377 50-160 (168)
441 3kh7_A Thiol:disulfide interch 93.7 0.087 3E-06 42.6 5.3 80 180-262 58-164 (176)
442 3ewl_A Uncharacterized conserv 93.5 0.33 1.1E-05 37.1 8.3 88 283-376 27-140 (142)
443 3kp9_A Vkorc1/thioredoxin doma 93.3 0.13 4.3E-06 45.3 6.0 81 171-262 190-277 (291)
444 3u5r_E Uncharacterized protein 93.2 0.33 1.1E-05 40.7 8.3 91 286-380 62-190 (218)
445 2hyx_A Protein DIPZ; thioredox 93.2 0.22 7.5E-06 45.2 7.6 92 283-378 82-200 (352)
446 3gn3_A Putative protein-disulf 92.9 0.14 4.8E-06 41.7 5.4 42 72-113 13-55 (182)
447 1z6n_A Hypothetical protein PA 92.7 0.23 7.7E-06 39.8 6.2 78 179-261 53-139 (167)
448 1u6t_A SH3 domain-binding glut 92.7 0.43 1.5E-05 35.7 7.2 59 76-138 1-73 (121)
449 2wul_A Glutaredoxin related pr 92.5 0.26 8.9E-06 36.7 5.8 67 63-138 10-85 (118)
450 2ggt_A SCO1 protein homolog, m 92.4 0.61 2.1E-05 36.6 8.4 90 283-377 23-161 (164)
451 3fw2_A Thiol-disulfide oxidore 92.3 1.9 6.5E-05 33.2 11.2 88 283-377 33-148 (150)
452 2jad_A Yellow fluorescent prot 92.2 0.11 3.9E-06 46.8 4.2 68 66-138 254-327 (362)
453 1i5g_A Tryparedoxin II; electr 92.1 0.58 2E-05 35.9 7.8 68 283-355 28-121 (144)
454 3tdg_A DSBG, putative uncharac 91.9 0.13 4.5E-06 44.4 4.1 29 73-101 147-175 (273)
455 1o8x_A Tryparedoxin, TRYX, TXN 91.7 0.68 2.3E-05 35.6 7.9 68 283-355 28-121 (146)
456 1un2_A DSBA, thiol-disulfide i 91.5 0.23 7.7E-06 41.0 5.0 95 116-213 39-153 (197)
457 3s9f_A Tryparedoxin; thioredox 91.5 0.73 2.5E-05 36.5 8.0 72 283-357 48-143 (165)
458 3dwv_A Glutathione peroxidase- 91.0 1.2 4.2E-05 36.0 9.0 94 283-379 46-185 (187)
459 2v1m_A Glutathione peroxidase; 90.8 0.95 3.3E-05 35.6 8.1 95 283-379 31-169 (169)
460 2rli_A SCO2 protein homolog, m 90.7 1.5 5.1E-05 34.6 9.2 92 283-377 26-164 (171)
461 2kok_A Arsenate reductase; bru 90.3 1.5 5E-05 32.7 8.1 43 77-125 7-56 (120)
462 2x8g_A Thioredoxin glutathione 90.2 0.37 1.3E-05 47.3 6.0 67 64-140 9-82 (598)
463 2e7p_A Glutaredoxin; thioredox 90.2 0.23 7.7E-06 36.7 3.5 84 172-263 12-106 (116)
464 2imf_A HCCA isomerase, 2-hydro 90.1 1.8 6.2E-05 35.5 9.4 36 120-160 160-195 (203)
465 2p5q_A Glutathione peroxidase 90.0 1.9 6.5E-05 33.9 9.2 94 283-378 32-169 (170)
466 3cmi_A Peroxiredoxin HYR1; thi 89.8 2 7E-05 33.9 9.2 90 283-377 32-168 (171)
467 2lrt_A Uncharacterized protein 89.6 1.7 5.7E-05 33.7 8.4 89 283-378 35-146 (152)
468 1o73_A Tryparedoxin; electron 89.6 0.92 3.2E-05 34.6 6.8 68 283-355 28-121 (144)
469 3eur_A Uncharacterized protein 89.0 1.8 6.3E-05 32.9 8.1 84 284-373 32-141 (142)
470 1wjk_A C330018D20RIK protein; 88.7 2.4 8.2E-05 30.2 8.0 76 180-264 15-95 (100)
471 2bmx_A Alkyl hydroperoxidase C 88.6 1.5 5.3E-05 35.6 7.8 96 283-380 45-173 (195)
472 1xzo_A BSSCO, hypothetical pro 87.7 2.2 7.7E-05 33.6 8.2 97 283-379 33-174 (174)
473 2vup_A Glutathione peroxidase- 87.4 2.1 7.3E-05 34.6 7.9 92 283-378 48-186 (190)
474 1we0_A Alkyl hydroperoxide red 87.3 2.8 9.7E-05 33.7 8.6 93 283-377 31-157 (187)
475 2obi_A PHGPX, GPX-4, phospholi 86.8 1.2 4.2E-05 35.7 6.1 41 283-325 47-89 (183)
476 3kij_A Probable glutathione pe 86.5 3.8 0.00013 32.7 8.9 94 283-378 38-171 (180)
477 3drn_A Peroxiredoxin, bacterio 86.1 5.4 0.00019 31.0 9.5 90 286-377 32-149 (161)
478 2p31_A CL683, glutathione pero 85.4 4.4 0.00015 32.4 8.7 92 283-376 49-180 (181)
479 2ls5_A Uncharacterized protein 85.3 0.17 6E-06 39.7 0.0 87 289-379 40-150 (159)
480 1z3e_A Regulatory protein SPX; 85.0 0.94 3.2E-05 34.5 4.2 34 77-116 3-36 (132)
481 3gn3_A Putative protein-disulf 84.7 0.7 2.4E-05 37.4 3.6 37 118-156 145-181 (182)
482 2g2q_A Glutaredoxin-2; thiored 83.8 2.1 7.3E-05 31.1 5.2 37 74-114 2-38 (124)
483 3kgk_A Arsenical resistance op 83.2 3.6 0.00012 29.9 6.3 50 105-157 40-99 (110)
484 4fo5_A Thioredoxin-like protei 82.9 2.4 8.2E-05 32.2 5.9 86 283-374 32-142 (143)
485 2gs3_A PHGPX, GPX-4, phospholi 82.5 4.5 0.00015 32.4 7.7 41 283-325 49-91 (185)
486 2k6v_A Putative cytochrome C o 81.7 2.1 7.3E-05 33.6 5.3 82 180-262 35-170 (172)
487 3c7m_A Thiol:disulfide interch 81.0 0.66 2.3E-05 37.8 2.0 42 117-160 152-193 (195)
488 1xvw_A Hypothetical protein RV 81.0 6.1 0.00021 30.5 7.8 89 285-375 38-158 (160)
489 1zof_A Alkyl hydroperoxide-red 80.5 2.8 9.6E-05 34.1 5.8 105 283-391 33-173 (198)
490 3ztl_A Thioredoxin peroxidase; 80.5 2.9 9.8E-05 34.9 5.9 109 282-392 68-211 (222)
491 2lus_A Thioredoxion; CR-Trp16, 80.9 0.37 1.3E-05 36.9 0.0 67 287-355 31-120 (143)
492 3ktb_A Arsenical resistance op 79.4 6.2 0.00021 28.4 6.4 63 92-157 26-102 (106)
493 2f8a_A Glutathione peroxidase 79.2 8.1 0.00028 31.7 8.2 41 283-325 47-89 (208)
494 2jsy_A Probable thiol peroxida 79.1 7.3 0.00025 30.4 7.7 90 283-376 44-166 (167)
495 2b7k_A SCO1 protein; metalloch 78.7 8.4 0.00029 31.3 8.1 109 283-394 41-197 (200)
496 1rw1_A Conserved hypothetical 78.5 1.6 5.6E-05 32.1 3.3 34 77-116 2-35 (114)
497 1ego_A Glutaredoxin; electron 77.2 3.2 0.00011 28.1 4.4 78 287-376 4-83 (85)
498 3fys_A Protein DEGV; fatty aci 75.7 2.3 7.7E-05 37.8 3.9 156 113-283 45-205 (315)
499 2k8s_A Thioredoxin; dimer, str 74.7 1.8 6E-05 29.2 2.4 50 184-236 4-61 (80)
500 1t3b_A Thiol:disulfide interch 72.4 4.5 0.00015 33.4 4.8 39 217-263 171-209 (211)
No 1
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=1.4e-48 Score=379.60 Aligned_cols=340 Identities=21% Similarity=0.335 Sum_probs=301.1
Q ss_pred CcEEcChhhHHHHHcCC---CcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 57 DVVSLNGKNFSEFMGKN---RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~---~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
.+..|+.++|+..+.++ ++++|+|||+||++|+++.|.|+++++.+++.+.++.|||++++++|++|+|+++||+++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~ 81 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKI 81 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 57889999999999777 999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEEEEecCCCCcCHHHHHHHh-ccCCceeEE
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFY 212 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~a-~~~~~~~f~ 212 (408)
|++|+.+.+|.|.++.+.|.+|+.+.+++++..+.+.++++.+++.++.++|+||.++++.....|..+| .+++++.|+
T Consensus 82 ~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~~~~~~F~ 161 (481)
T 3f8u_A 82 FRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFA 161 (481)
T ss_dssp EETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHHTTTSCEE
T ss_pred EeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHhccCceEE
Confidence 9999888999999999999999999999999999999999999999999999999988899999999988 788999999
Q ss_pred EecCHhHHhhcCCCCCCCCCeEEEee------cCCCcccccC-CcCCHHHHHHHHhcCCCCceEeeccccccccccCCcc
Q 015368 213 QTTSADVAEFFHIHPKSKRPALIFLH------LEAGKATPFR-HQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRK 285 (408)
Q Consensus 213 ~~~~~~l~~~~~i~~~~~~p~l~~~~------~~~~~~~~y~-g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~ 285 (408)
.+.+.+++++++++. +.+++|+ ..++.+..|+ |.++.++|.+||..++.|+++++|.+|+..++.. +
T Consensus 162 ~~~~~~~~~~~~v~~----~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~--~ 235 (481)
T 3f8u_A 162 HTNVESLVNEYDDNG----EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--D 235 (481)
T ss_dssp EECCHHHHHHHCSSS----EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTTS--S
T ss_pred EECCHHHHHHhCCCC----CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcCC--C
Confidence 999999999999984 5688888 4455778998 7899999999999999999999999999998865 4
Q ss_pred EEEEEeeCC--Cc----hHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCC--CCCCcEEEEEccCCccc
Q 015368 286 QLWLFAPAY--GS----DKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVS--GNAPRVIAYSARDAKKY 357 (408)
Q Consensus 286 ~~i~f~~~~--~~----~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~--~~~~p~i~i~~~~~~~y 357 (408)
++++|...+ .. +.+...++++|++++++.+.+.|+++|+... .+.++.||++ ....|.+++.+.++++|
T Consensus 236 ~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~---~~~l~~~gl~~~~~~~P~~~i~~~~~~ky 312 (481)
T 3f8u_A 236 LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF---SHELSDFGLESTAGEIPVVAIRTAKGEKF 312 (481)
T ss_dssp EEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT---HHHHGGGTCCCCTTCSCEEEEECSSSCEE
T ss_pred ceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHH---HHHHHHcCCCcccCCCcEEEEEcCCCccc
Confidence 455554432 22 2257789999999987544599999997753 3567899998 34689999998778899
Q ss_pred cCCCCCChH--HHHHHHHHHhcCcc--ccccccCchh----hhcCccCCccceeee
Q 015368 358 VLNGELTLS--SIKSFGEEFLEDKL--LNQSDQISET----ILKLPSQSRASYQLR 405 (408)
Q Consensus 358 ~~~~~~~~~--~i~~Fi~~~~~gk~--~~kse~iP~~----~~~~~~~~~~~~~~~ 405 (408)
.|+++++.+ .|.+|++++++|++ +.+|+++|+. +..+++++|++.+..
T Consensus 313 ~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~ 368 (481)
T 3f8u_A 313 VMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN 368 (481)
T ss_dssp ECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC
T ss_pred CCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc
Confidence 999999999 99999999999999 8999999965 777888888877654
No 2
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=4.8e-48 Score=361.17 Aligned_cols=315 Identities=14% Similarity=0.208 Sum_probs=278.5
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhh------HHHHHHHHHhcC-CcEEEEEeCcccHhHHHHcCCC
Q 015368 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLA------PEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL 126 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~------p~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~ 126 (408)
..+.+..|+.++|+..+.++++++|+||||||+||+... |.++++++.+++ ++.+++|||++++++|++|+|+
T Consensus 11 ~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~ 90 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLT 90 (367)
T ss_dssp CCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCC
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCC
Confidence 345799999999999998899999999999999974433 789999999987 6999999999999999999999
Q ss_pred cCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhc-cCCeEEEEEecCCCCcCHHHHHHHh-c
Q 015368 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESEELAAAS-K 204 (408)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~-~~~~~vi~f~~~~~~~~~~~~~~~a-~ 204 (408)
++||+++|++|+. ..|.|.++.+.|.+|+.+.+++++..+.+.++++.++. .++.++|+||.+++++.++.|..+| .
T Consensus 91 ~~PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~~~A~~ 169 (367)
T 3us3_A 91 EEDSIYVFKEDEV-IEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFKEAAEE 169 (367)
T ss_dssp STTEEEEEETTEE-EECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHHHHHHH
T ss_pred cCceEEEEECCcE-EEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHHHHHHh
Confidence 9999999999954 69999999999999999999999999999999999998 6788999999999999999999988 6
Q ss_pred cCCceeEEEecCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCc-CCHHHHHHHHhcCCCCceEeeccccccccccCC
Q 015368 205 LHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (408)
Q Consensus 205 ~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~-~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~ 283 (408)
+++++.|+.+.+..++++++++ .|+|++|+..++.+..|+|. ++.++|.+||..++.|++.++|.+++..++..+
T Consensus 170 ~~~~~~F~~~~~~~~~~~~~v~----~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~ 245 (367)
T 3us3_A 170 FHPYIPFFATFDSKVAKKLTLK----LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDD 245 (367)
T ss_dssp HTTTSCEEEECCHHHHHHHTCC----TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSC
T ss_pred hcCCcEEEEECCHHHHHHcCCC----CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhc
Confidence 8889999999999999999998 39999999877788999995 899999999999999999999999988877653
Q ss_pred --ccEEEEEeeCCC--chHHHHHHHHHHHHhcC--CcceEEEEEEEcCCcccccch----hhhccCCCCCCcEEEEEcc-
Q 015368 284 --RKQLWLFAPAYG--SDKVILTFEEVAKALKG--KVNMLLHVYVEMNSEGVGRRV----SQEFGVSGNAPRVIAYSAR- 352 (408)
Q Consensus 284 --~~~~i~f~~~~~--~~~~~~~~~~vA~~~~~--~~~~i~f~~vd~~~~~~~~~l----~~~~~i~~~~~p~i~i~~~- 352 (408)
.+++++|.+..+ .+++...++++|+++++ + +.|+|+|+.... +. .+.||++ ...|++++.+.
T Consensus 246 ~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~k---i~F~~id~~~~~---~~l~~~~~~fgl~-~~~P~~~i~~~~ 318 (367)
T 3us3_A 246 MDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPD---LSIIWIDPDDFP---LLVPYWEKTFDID-LSAPQIGVVNVT 318 (367)
T ss_dssp BTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTT---CCEEEECGGGCT---TTHHHHHHHHTCC-TTSCEEEEEETT
T ss_pred cCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCc---eEEEEECCccch---hHHHHHHHhcCCC-CCCCeEEEEecc
Confidence 256777877544 57888899999999998 7 999999987642 33 3459997 45899999987
Q ss_pred CC--ccccCCC---CCChHHHHHHHHHHhcCcc
Q 015368 353 DA--KKYVLNG---ELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 353 ~~--~~y~~~~---~~~~~~i~~Fi~~~~~gk~ 380 (408)
++ ++|.+.+ .++.++|.+|++++++|++
T Consensus 319 ~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl 351 (367)
T 3us3_A 319 DADSVWMEMDDEEDLPSAEELEDWLEDVLEGEI 351 (367)
T ss_dssp TCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSS
T ss_pred cccceeecCCcccccCCHHHHHHHHHHHHcCCc
Confidence 44 5777764 7999999999999999999
No 3
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=368.19 Aligned_cols=321 Identities=20% Similarity=0.291 Sum_probs=251.2
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhc------CCcEEEEEeCcccHhHHHHcCCCcCc
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK------GEADLVMVDAYLEKDLAKEYNILAYP 129 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~------~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (408)
+.+..|++++|+..+.++++++|+|||+||+||+++.|.|+++++.++ +++.++.|||++++++|++|+|+++|
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 468889999999988889999999999999999999999999999984 36999999999999999999999999
Q ss_pred EEEEEeCCeEeE-EeeCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEEEEecCCCCcCHHHHHHHh-ccCC
Q 015368 130 TLYLFVAGVRQF-QFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHS 207 (408)
Q Consensus 130 t~~~~~~g~~~~-~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~a-~~~~ 207 (408)
|+++|++|+.+. .|.|.++.+.|.+|+.+.+++++..+.+.++++. +..++.++|+||.+.+.+.++.|..+| .+++
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~~~~~ 163 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHD 163 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHHHhhc
Confidence 999999997766 5999999999999999999999999988888888 677788899999988888888899888 6888
Q ss_pred ceeEEEecCHhHHhhcCCCCCCCCCeEEEeecC--CCcccccCCcC-CHHHHHHHHhcCCCCceEeeccccccccccCCc
Q 015368 208 DVNFYQTTSADVAEFFHIHPKSKRPALIFLHLE--AGKATPFRHQF-TRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPR 284 (408)
Q Consensus 208 ~~~f~~~~~~~l~~~~~i~~~~~~p~l~~~~~~--~~~~~~y~g~~-~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~ 284 (408)
++.|+.+.+ ++.+.++++ +.| + +|+.. ......|+|.+ +.++|.+||..++.|++.++|.+++..++..+.
T Consensus 164 ~~~F~~~~~-~~~~~~~v~---~~p-i-~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~ 237 (382)
T 2r2j_A 164 DCAFLSAFG-DVSKPERYS---GDN-I-IYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGL 237 (382)
T ss_dssp TCEEEEEES-CC-----------CE-E-EEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHTTCC
T ss_pred cceEEEEeh-hhHHhhCCC---CCc-e-EECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhcCCC
Confidence 999998877 678888887 467 4 45554 23568899998 889999999999999999999999999998888
Q ss_pred cEEEEEeeCCC---chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCccccC--
Q 015368 285 KQLWLFAPAYG---SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVL-- 359 (408)
Q Consensus 285 ~~~i~f~~~~~---~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~-- 359 (408)
+++++|....+ .+.+...+.++|.+++++ +.|+|+|+... .++++.||++....|++++.+. ++.|.|
T Consensus 238 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~---i~f~~id~~~~---~~~~~~~gl~~~~~P~i~i~~~-~~~y~~~~ 310 (382)
T 2r2j_A 238 PFLILFHMKEDTESLEIFQNEVARQLISEKGT---INFLHADCDKF---RHPLLHIQKTPADCPVIAIDSF-RHMYVFGD 310 (382)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTGGGTTT---SEEEEEETTTT---HHHHHHTTCCGGGCSEEEEECS-SCEEECCC
T ss_pred cEEEEEecCCchHHHHHHHHHHHHHHHHhCCe---eEEEEEchHHh---HHHHHHcCCCccCCCEEEEEcc-hhcCCCCc
Confidence 88888876544 334555666777788888 99999998753 3678999998767899999875 334544
Q ss_pred -CCCCChHHHHHHHHHHhcCcc--ccccccCchh
Q 015368 360 -NGELTLSSIKSFGEEFLEDKL--LNQSDQISET 390 (408)
Q Consensus 360 -~~~~~~~~i~~Fi~~~~~gk~--~~kse~iP~~ 390 (408)
++.++.+.|.+|++++++|++ ++||||+|++
T Consensus 311 ~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~ 344 (382)
T 2r2j_A 311 FKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTD 344 (382)
T ss_dssp SGGGGSTTHHHHHHHHHHHTTTSSCC--------
T ss_pred cccccCHHHHHHHHHHHHCCCccccccCCCCCCC
Confidence 345678999999999999999 9999999987
No 4
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=5.1e-47 Score=353.00 Aligned_cols=313 Identities=19% Similarity=0.245 Sum_probs=277.5
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHH-------HHHHHHHhcC-CcEEEEEeCcccHhHHHHcCCC
Q 015368 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPE-------FAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL 126 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~-------~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~ 126 (408)
.+.+..|+.++|+..+.++++++|+||||||+ |+.++|. |+++++.+++ ++.++.|||++++++|++|+|+
T Consensus 10 ~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 35689999999999998899999999999999 9999999 9999999987 6999999999999999999999
Q ss_pred cCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhc-cCCeEEEEEecCCCCcCHHHHHHHh-c
Q 015368 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMESEELAAAS-K 204 (408)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~-~~~~~vi~f~~~~~~~~~~~~~~~a-~ 204 (408)
++||+++|++|+ +.+|.|.++.+.|.+|+.+.+++++..+.+.++++.++. .++.++|+||.+++++.++.|..+| .
T Consensus 89 ~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~~ 167 (350)
T 1sji_A 89 EEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAEH 167 (350)
T ss_dssp STTEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ccceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHHh
Confidence 999999999996 679999999999999999999999999999999999998 7788999999998888899999988 6
Q ss_pred cCCceeEEEecCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCc-CCHHHHHHHHhcCCCCceEeeccccccccccCC
Q 015368 205 LHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-FTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (408)
Q Consensus 205 ~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~-~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~ 283 (408)
+++++.|+.+.+.+++++++++ .|++++|+..++.+..|+|. ++.++|.+||..++.|++.++|.+++..+++.+
T Consensus 168 ~~~~~~f~~~~~~~~~~~~~v~----~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~ 243 (350)
T 1sji_A 168 FQPYIKFFATFDKGVAKKLSLK----MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDD 243 (350)
T ss_dssp TTTTSEEEEECCHHHHHHHTCC----TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHSC
T ss_pred hccCcEEEEECCHHHHHHcCCC----CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcCC
Confidence 7799999999999999999997 69999999877788899997 899999999999999999999999999998865
Q ss_pred c-c-EEEEEeeCCC--chHHHHHHHHHHHHhcC--CcceEEEEEEEcCCcccccchh----hhccCCCCCCcEEEEEcc-
Q 015368 284 R-K-QLWLFAPAYG--SDKVILTFEEVAKALKG--KVNMLLHVYVEMNSEGVGRRVS----QEFGVSGNAPRVIAYSAR- 352 (408)
Q Consensus 284 ~-~-~~i~f~~~~~--~~~~~~~~~~vA~~~~~--~~~~i~f~~vd~~~~~~~~~l~----~~~~i~~~~~p~i~i~~~- 352 (408)
. + .+++|....+ +.++...++++|+++++ + +.|+|+|+... ..++ +.||++. ..|++++++.
T Consensus 244 ~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~---~~f~~id~~~~---~~~~~~~~~~~gi~~-~~P~~~i~~~~ 316 (350)
T 1sji_A 244 LNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPD---LSIVWIDPDDF---PLLVAYWEKTFKIDL-FKPQIGVVNVT 316 (350)
T ss_dssp SSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSS---CCEEEECGGGC---HHHHHHHHHHCCSCT-TSCEEEEEESS
T ss_pred CCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCc---eEEEEECchhh---HHHHHHHHhhcCCCc-cCCcEEEEecc
Confidence 4 3 3444655433 46889999999999986 7 99999998753 3556 7899973 4699999987
Q ss_pred CCcccc--CC---CCCChHHHHHHHHHHhcCcc
Q 015368 353 DAKKYV--LN---GELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 353 ~~~~y~--~~---~~~~~~~i~~Fi~~~~~gk~ 380 (408)
++.+|. +. +.++.++|.+|++++++|++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 317 DADSVWMEIPDDDDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp SSCEEESCSSCCSCCCCHHHHHHHHHHHHTSCC
T ss_pred cccccccCCCcccccCCHHHHHHHHHHHhcCcc
Confidence 555665 43 48999999999999999986
No 5
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=1.5e-45 Score=359.93 Aligned_cols=332 Identities=19% Similarity=0.267 Sum_probs=292.7
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
..+.+..|+.++|+..+.++++++|+||||||+||+++.|.|+++++.+++ ++.++.|||++++++|++|+|+++||++
T Consensus 12 ~~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 91 (504)
T 2b5e_A 12 EDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLK 91 (504)
T ss_dssp TTSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 346799999999999998899999999999999999999999999999988 5999999999999999999999999999
Q ss_pred EEeCCeE--eEEeeCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhccCC--eEEEEEecCCCCcCHHHHHHHh-ccCC
Q 015368 133 LFVAGVR--QFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVES--KLVLGFLHDLEGMESEELAAAS-KLHS 207 (408)
Q Consensus 133 ~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~--~~vi~f~~~~~~~~~~~~~~~a-~~~~ 207 (408)
+|++|+. +.+|.|.++.+.|.+|+.+.+++++..+++ ++.+++..+ ..+|+||.+.++.....|..+| .+++
T Consensus 92 ~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~A~~~~~ 168 (504)
T 2b5e_A 92 IFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHFN 168 (504)
T ss_dssp EEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHHHHHHHHHTTT
T ss_pred EEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHHHHHHHHHhhc
Confidence 9999976 889999999999999999999999999987 888887777 8888899887777888899888 7889
Q ss_pred ceeEEEecCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCc-C---CHHHHHHHHhcCCCCceEeeccccccccccCC
Q 015368 208 DVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQ-F---TRLAIANFVTHTKHPLVVTLTIHNAQFVFQDP 283 (408)
Q Consensus 208 ~~~f~~~~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~-~---~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~ 283 (408)
++.|+.+. +++++++++ +++|+..+ .+..|+|+ + +.++|.+||..++.|++.++|.+++..++..+
T Consensus 169 ~~~F~~~~--~~~~~~~~~-------i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~ 238 (504)
T 2b5e_A 169 DYDFVSAE--NADDDFKLS-------IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESG 238 (504)
T ss_dssp TCEEEEEE--CTTSCCEEE-------EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHTT
T ss_pred CcEEEEEH--HHHHhcCCe-------EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcCC
Confidence 99999887 566666652 77787755 77889998 7 88999999999999999999999999999988
Q ss_pred ccEEEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEcc-CCccccCC-
Q 015368 284 RKQLWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLN- 360 (408)
Q Consensus 284 ~~~~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~-~~~~y~~~- 360 (408)
.++++++....+ .+.+...++++|++++++ +.|+|+|+... .++++.||+ ....|++++++. ++.+|.+.
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~---i~F~~id~~~~---~~~~~~~gl-~~~~P~v~i~~~~~~~ky~~~~ 311 (504)
T 2b5e_A 239 LPLGYLFYNDEEELEEYKPLFTELAKKNRGL---MNFVSIDARKF---GRHAGNLNM-KEQFPLFAIHDMTEDLKYGLPQ 311 (504)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHHTTTT---CEEEEEEHHHH---TTHHHHTTC-CSCSSEEEEEETTTTEEEECCC
T ss_pred CcEEEEEecCcccHHHHHHHHHHHHHhcCCe---eEEEEEehhhh---HHHHHHcCC-cccCCEEEEEeCCcCcccCCCC
Confidence 888877765422 467888999999999999 99999998753 478899999 667899999988 77788886
Q ss_pred -CC-----------CChHHHHHHHHHHhcCcc--ccccccCchh----hhcCccCCccceeee
Q 015368 361 -GE-----------LTLSSIKSFGEEFLEDKL--LNQSDQISET----ILKLPSQSRASYQLR 405 (408)
Q Consensus 361 -~~-----------~~~~~i~~Fi~~~~~gk~--~~kse~iP~~----~~~~~~~~~~~~~~~ 405 (408)
++ ++.+.|.+|+.+++.|++ +.+|+++|+. +..+.++||++.+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~ 374 (504)
T 2b5e_A 312 LSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVND 374 (504)
T ss_dssp CCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHC
T ss_pred CccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhcc
Confidence 55 899999999999999999 8999999964 677888998876654
No 6
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=2.3e-35 Score=302.65 Aligned_cols=312 Identities=16% Similarity=0.242 Sum_probs=254.5
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
....+..|+.++|+..+.++++++|+|||+||++|+++.|.|+++++.+++.+.++.|||++++++|++|+|.++||+++
T Consensus 114 ~~~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 193 (780)
T 3apo_A 114 DDPEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 193 (780)
T ss_dssp TCTTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEEEE
T ss_pred CCcceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEE
Confidence 34578999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHhCCCcccccCh---hHHHHHhccCCeEEEEEecCCCC-cCHHHHHHHh-ccC--
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITTT---DEAERILTVESKLVLGFLHDLEG-MESEELAAAS-KLH-- 206 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~---~~~~~~~~~~~~~vi~f~~~~~~-~~~~~~~~~a-~~~-- 206 (408)
|++|+.+.+|.|.++.+.|.+|+.+.+++.+..+.+. ++++.++..+.+.+++|+..... +....+..++ .+.
T Consensus 194 ~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~ 273 (780)
T 3apo_A 194 FRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGL 273 (780)
T ss_dssp ECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHHTTTT
T ss_pred EeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHHhhcc
Confidence 9999878999999999999999999999999999887 68888887777888888765431 2222222222 111
Q ss_pred --------------------------------------------------------------------------------
Q 015368 207 -------------------------------------------------------------------------------- 206 (408)
Q Consensus 207 -------------------------------------------------------------------------------- 206 (408)
T Consensus 274 ~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~ 353 (780)
T 3apo_A 274 VNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHR 353 (780)
T ss_dssp EEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSE
T ss_pred ceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhccCC
Confidence
Q ss_pred ---------------------------CceeEEEe---cCHhHHhhcCCCCCCCCCeEEEeecCC-CcccccCCcCCHHH
Q 015368 207 ---------------------------SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEA-GKATPFRHQFTRLA 255 (408)
Q Consensus 207 ---------------------------~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~~~~~-~~~~~y~g~~~~~~ 255 (408)
..+.|+.+ .+..+++.++++ .|++++++..+ +.+..|.|+.+.++
T Consensus 354 ~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~----~p~i~l~~~~~~e~~~~~~g~~~~~~ 429 (780)
T 3apo_A 354 WLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVF----QPSLAVFKGQGTKEYEIHHGKKILYD 429 (780)
T ss_dssp EEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCC----SCEEEEEESSTTSSEEECCSCCCHHH
T ss_pred eEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhcccc----CChhhhccCCCcceeeecccHhhHHH
Confidence 23445544 455688888887 39999998866 45788999999999
Q ss_pred HHHHHhcCCCCceEeeccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccch
Q 015368 256 IANFVTHTKHPLVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRV 333 (408)
Q Consensus 256 i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l 333 (408)
|.+|+..+..|.+.++|.+++..+ .+.++++ ++.+|+. |....+.++++|++++++ +.|+.+|++.. ..+
T Consensus 430 i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~---v~~~~vd~~~~---~~~ 501 (780)
T 3apo_A 430 ILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ---LKVGTLDCTIH---EGL 501 (780)
T ss_dssp HHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHH
T ss_pred HHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEeCCCC---HHH
Confidence 999999999999999999999887 4445544 5556776 889999999999999988 99999999864 478
Q ss_pred hhhccCCCCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCcc
Q 015368 334 SQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 334 ~~~~~i~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
++.||+.. .|.+++++. ++++.+.|..+.++|.+|+++++++.+
T Consensus 502 ~~~~~v~~--~Pt~~~~~~-g~~~~~~g~~~~~~l~~fi~~~~~~~v 545 (780)
T 3apo_A 502 CNMYNIQA--YPTTVVFNQ-SSIHEYEGHHSAEQILEFIEDLRNPSV 545 (780)
T ss_dssp HHHTTCCS--SSEEEEEET-TEEEEECSCSCHHHHHHHHHHHHSCSE
T ss_pred HHHcCCCc--CCeEEEEcC-CceeeecCcccHHHHHHHHHhhcccce
Confidence 89999965 788888864 666888999999999999999999776
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=7.6e-34 Score=291.41 Aligned_cols=308 Identities=19% Similarity=0.241 Sum_probs=259.5
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
+.+..++.++|+.. .+++++|+|||+||++|++++|.++++++.+++++.|+.|||++++.+|+.|||.++||+++++
T Consensus 440 ~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 517 (780)
T 3apo_A 440 SHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFN 517 (780)
T ss_dssp SCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEEc
Confidence 45778888888776 7889999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhcc---CCeEEEEEecCCCCc---CHHHHHHHh-ccCCc
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTV---ESKLVLGFLHDLEGM---ESEELAAAS-KLHSD 208 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~---~~~~vi~f~~~~~~~---~~~~~~~~a-~~~~~ 208 (408)
+|+. .+|.|.++.+.|.+|+++.+.+++..++ .++++.++.. +..+++.|+.+||++ ..+.+..+| .+.++
T Consensus 518 ~g~~-~~~~g~~~~~~l~~fi~~~~~~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~ 595 (780)
T 3apo_A 518 QSSI-HEYEGHHSAEQILEFIEDLRNPSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL 595 (780)
T ss_dssp TTEE-EEECSCSCHHHHHHHHHHHHSCSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred CCce-eeecCcccHHHHHHHHHhhcccceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC
Confidence 9854 8899999999999999999999998885 6788888864 457899999999887 455677777 57778
Q ss_pred eeEEEe---cCHhHHhhcCCCCCCCCCeEEEeecCCC---cccccCC-cCCHHHHHHHHhcCCCCceEeeccccccc-cc
Q 015368 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAG---KATPFRH-QFTRLAIANFVTHTKHPLVVTLTIHNAQF-VF 280 (408)
Q Consensus 209 ~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~~~~~~---~~~~y~g-~~~~~~i~~fi~~~~~p~v~~lt~~~~~~-~~ 280 (408)
+.|+.+ .+..+++.++++ ++|++++|+.++. .+..|+| .++.++|.+|+.....|.+.+++.+++.. +.
T Consensus 596 v~~~~vd~~~~~~l~~~~~v~---~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~ 672 (780)
T 3apo_A 596 INVGSVDCGQYHSFCTQENVQ---RYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKVL 672 (780)
T ss_dssp SEEEEEETTTTHHHHHHTTCC---SSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHTT
T ss_pred eEEEEEECcchHHHHHHcCCC---CCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHHh
Confidence 999876 456788999998 5999999987654 3677999 78999999999999999999999999865 55
Q ss_pred cCCccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCcccc
Q 015368 281 QDPRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYV 358 (408)
Q Consensus 281 ~~~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~ 358 (408)
..+.++++. +.+||. |+...+.+.++|++++++ +.|+.+|++.. ..+++.||+. ..|.++++..+.....
T Consensus 673 ~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~---~~~~~vd~~~~---~~~~~~~~v~--~~Pt~~~~~~g~~~~~ 744 (780)
T 3apo_A 673 QGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK---VRAGKVDCQAY---PQTCQKAGIK--AYPSVKLYQYERAKKS 744 (780)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTC---HHHHHHTTCC--SSSEEEEEEEETTTTE
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---ceEEEEECCCC---HHHHHhcCCC--cCCEEEEEcCCCcccc
Confidence 555666554 456776 899999999999999988 99999999764 4788999995 3688877754333333
Q ss_pred CCC----CCChHHHHHHHHHHhcC
Q 015368 359 LNG----ELTLSSIKSFGEEFLED 378 (408)
Q Consensus 359 ~~~----~~~~~~i~~Fi~~~~~g 378 (408)
+.| ..+.+.|.+||++.+..
T Consensus 745 ~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 745 IWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp EEEEEECCCCHHHHHHHHHHHTTC
T ss_pred ccCcccCCcCHHHHHHHHHHHHHH
Confidence 333 68999999999999864
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=247.89 Aligned_cols=221 Identities=20% Similarity=0.333 Sum_probs=190.5
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc--ccHhHHHHcCCCcCcE
Q 015368 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPT 130 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~i~~~Pt 130 (408)
....+++|+.++|++.+ ..+++++|+|||+||++|+++.|.|+++++.+++.+.++.|||+ +++++|++|+|.++||
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt 94 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPT 94 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSE
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccce
Confidence 44688999999999988 56789999999999999999999999999999888999999998 6899999999999999
Q ss_pred EEEEeCCe-----------------EeEEeeCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEEEEecCCCC
Q 015368 131 LYLFVAGV-----------------RQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEG 193 (408)
Q Consensus 131 ~~~~~~g~-----------------~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~ 193 (408)
+++|++|+ ....|.|.++.+.|.+|+.+.+++.+..+.+.++++.++..++...+++|.. .+
T Consensus 95 ~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~-~~ 173 (298)
T 3ed3_A 95 LMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSK-QD 173 (298)
T ss_dssp EEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEES-SS
T ss_pred EEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcC-CC
Confidence 99999885 3688999999999999999999999999999999999998754444445543 45
Q ss_pred cCHHHHHHHh-ccCCceeEEEecCHhHHhhcCC-----C---------------CCCCCCeEEEeecCCCcccccCC-cC
Q 015368 194 MESEELAAAS-KLHSDVNFYQTTSADVAEFFHI-----H---------------PKSKRPALIFLHLEAGKATPFRH-QF 251 (408)
Q Consensus 194 ~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~i-----~---------------~~~~~p~l~~~~~~~~~~~~y~g-~~ 251 (408)
.....|..+| .+.+++.|+.+.+.+++..+++ + .....|+|++|+...+.+..|.| .+
T Consensus 174 ~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~ 253 (298)
T 3ed3_A 174 KISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSI 253 (298)
T ss_dssp SCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSC
T ss_pred cchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccC
Confidence 6778899888 7889999999988877644421 0 00147999999988889999996 68
Q ss_pred CHHHHHHHHh--cCCCCceEeecccc
Q 015368 252 TRLAIANFVT--HTKHPLVVTLTIHN 275 (408)
Q Consensus 252 ~~~~i~~fi~--~~~~p~v~~lt~~~ 275 (408)
+.++|.+||. .+..|++.+||..+
T Consensus 254 ~~~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 254 NKNDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp CHHHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred CHHHHHHHHHhhcCCCCCcCCCchHH
Confidence 9999999999 89999999999765
No 9
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.4e-30 Score=230.63 Aligned_cols=230 Identities=15% Similarity=0.235 Sum_probs=182.7
Q ss_pred hHhCCCcccccChhHHHHHhccCCeEEEEEecCCCCcCHHHHHHHh-ccCCceeEEEecCHhHHhhcCCCCCCCCCeEEE
Q 015368 158 EKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (408)
Q Consensus 158 ~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~~ 236 (408)
++.+|++..|++.++++.+++.++.++|+||.++++..++.|..+| .+++++.|+.+.+.+++++++++ .|+|++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~----~p~i~~ 77 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDN----GEGIIL 77 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSS----SEEEEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCC----CCcEEE
Confidence 4678999999999999999999999999999999999999999988 67799999999999999999998 399999
Q ss_pred eecC------CCccccc-CCcCCHHHHHHHHhcCCCCceEeeccccccccccCCccEEEEEeeC--CC----chHHHHHH
Q 015368 237 LHLE------AGKATPF-RHQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRKQLWLFAPA--YG----SDKVILTF 303 (408)
Q Consensus 237 ~~~~------~~~~~~y-~g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~i~f~~~--~~----~~~~~~~~ 303 (408)
|++. ++....| +|+++.++|.+||..++.|++.++|.+|+..++.. |++++|... .. .+.+...+
T Consensus 78 fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T 2h8l_A 78 FRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRV 155 (252)
T ss_dssp ECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSS--SEEEEEECCBTTTBHHHHHHHHHHH
T ss_pred EcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcCC--CeEEEEeecchhhcchhHHHHHHHH
Confidence 9852 3567889 99999999999999999999999999999998654 455555432 11 23588889
Q ss_pred HHHHHHhcCCcceEEEEEEEcCCcccccchhhhccC--CCCCCcEEEEEccCCccccCCCCCChHH--HHHHHHHHhcCc
Q 015368 304 EEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGV--SGNAPRVIAYSARDAKKYVLNGELTLSS--IKSFGEEFLEDK 379 (408)
Q Consensus 304 ~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i--~~~~~p~i~i~~~~~~~y~~~~~~~~~~--i~~Fi~~~~~gk 379 (408)
+++|++++++.+.+.|+|+|+... . ++++.||+ +....|++++.+.++++|.|++.++.+. |.+|++++++|+
T Consensus 156 ~~vA~~~~~k~~~~~F~~~d~~~~--~-~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~~~i~~F~~~~~~Gk 232 (252)
T 2h8l_A 156 MMVAKKFLDAGHKLNFAVASRKTF--S-HELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGN 232 (252)
T ss_dssp HHHHHHHHHTTCCCEEEEEETTTT--H-HHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTSHHHHHHHHHHHHTC
T ss_pred HHHHHHccccCceEEEEEEchHHH--H-HHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcchHHHHHHHHHHHCCC
Confidence 999999986434599999998753 3 57899999 5567899999987788999988999999 999999999999
Q ss_pred c--ccccccCchhhhcCccC
Q 015368 380 L--LNQSDQISETILKLPSQ 397 (408)
Q Consensus 380 ~--~~kse~iP~~~~~~~~~ 397 (408)
+ ++||||||++ +.++++
T Consensus 233 l~~~~kSe~iPe~-~~~pV~ 251 (252)
T 2h8l_A 233 LKRYLKSEPIPES-NDGAAA 251 (252)
T ss_dssp SCCCC---------------
T ss_pred ccccccCCCCCCC-CCCCCC
Confidence 9 8999999998 777664
No 10
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.97 E-value=9.6e-30 Score=224.30 Aligned_cols=208 Identities=23% Similarity=0.411 Sum_probs=178.3
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCC---cEEEEEeCcccHhHHHHcCCCcCcE
Q 015368 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE---ADLVMVDAYLEKDLAKEYNILAYPT 130 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (408)
..+.+..+++++|+..+.++++++|+|||+||++|+++.|.|+++++.+++. +.++.|||++++++|++|+|+++||
T Consensus 13 ~~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 92 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPT 92 (241)
T ss_dssp EETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSE
T ss_pred cCCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCE
Confidence 3568999999999999999999999999999999999999999999999874 9999999999999999999999999
Q ss_pred EEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCCC------cccccChhHHHHHhccCCeEEEEEecCCCCcC---HHHHHH
Q 015368 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLG------TYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAA 201 (408)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~------~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~---~~~~~~ 201 (408)
+++|++|+.+ +|.|.++.+.+.+|+.+...+. .....+.++++.++..++.+++.|+++||.++ .+.+..
T Consensus 93 ~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~ 171 (241)
T 3idv_A 93 IKILKKGQAV-DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEK 171 (241)
T ss_dssp EEEEETTEEE-ECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHH
T ss_pred EEEEcCCCcc-cccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHH
Confidence 9999999655 7999999999999999988653 22334678899999888999999999999874 456666
Q ss_pred Hh-ccC---CceeEEEe---cCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCCCCc
Q 015368 202 AS-KLH---SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPL 267 (408)
Q Consensus 202 ~a-~~~---~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~ 267 (408)
++ ++. ..+.|+.+ .+.+++++|++. ++|++++|+.+ ....|.|..+.++|.+||....-|.
T Consensus 172 ~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~---~~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 172 AAKELSKRSPPIPLAKVDATAETDLAKRFDVS---GYPTLKIFRKG--RPYDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp HHHHHHTSSSCCCEEEEETTTCHHHHHHTTCC---SSSEEEEEETT--EEEECCSCCSHHHHHHHHHHHTTCT
T ss_pred HHHHHhccCCcEEEEEEECCCCHHHHHHcCCc---ccCEEEEEECC--eEEEecCCCCHHHHHHHHHhhhCCC
Confidence 65 343 33777765 467899999999 59999999864 5667999999999999999876653
No 11
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.97 E-value=1.8e-30 Score=229.31 Aligned_cols=225 Identities=17% Similarity=0.226 Sum_probs=182.2
Q ss_pred HhCCCcccccChhHHHHHhcc-CCeEEEEEecCCCCcCHHHHHHHh-ccCCceeEEEecCHhHHhhcCCCCCCCCCeEEE
Q 015368 159 KMTLGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEELAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (408)
Q Consensus 159 ~~~~~~~~i~~~~~~~~~~~~-~~~~vi~f~~~~~~~~~~~~~~~a-~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~~ 236 (408)
+.+|++..|++.++++.+++. ++.++|+||.++++..++.|..+| .+++++.|+.+.+.+++++++++. |+|++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~----p~ivl 78 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSL----GKLVL 78 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCS----SEEEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCC----CeEEE
Confidence 468999999999999999998 999999999999999999999998 688999999999999999999983 99999
Q ss_pred eecC------CCcccccC--CcCCHHHHHHHHhcCCCCceEeeccccccccccCCccEEEEEeeCC-------CchHHHH
Q 015368 237 LHLE------AGKATPFR--HQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRKQLWLFAPAY-------GSDKVIL 301 (408)
Q Consensus 237 ~~~~------~~~~~~y~--g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~i~f~~~~-------~~~~~~~ 301 (408)
|++. ++....|+ |.++.++|.+||..++.|++.++|.+|+..++. +.|++++|...+ +.+.++.
T Consensus 79 fk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~ 157 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRN 157 (250)
T ss_dssp ECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHH
T ss_pred EecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHH
Confidence 9963 45678888 478999999999999999999999999998884 567777766421 1356888
Q ss_pred HHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC-CcEEEEEccCCccccCC-CCCChHHHHHHHHHHhcCc
Q 015368 302 TFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA-PRVIAYSARDAKKYVLN-GELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 302 ~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~-~p~i~i~~~~~~~y~~~-~~~~~~~i~~Fi~~~~~gk 379 (408)
.++++|++++ + ++|+|+|+.+. . +.++.||++... +|.+++.+.++++|.+. +.++.++|.+|++++++|+
T Consensus 158 ~~~~vAk~~k-k---i~F~~~d~~~~--~-~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 230 (250)
T 3ec3_A 158 KVLEVAKDFP-E---YTFAIADEEDY--A-TEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFKKGK 230 (250)
T ss_dssp HHHHHHTTCT-T---SEEEEEETTTT--H-HHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhc-c---eeEEEEcHHHH--H-HHHHHcCCCccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHHCCC
Confidence 9999999999 8 99999998653 3 456899998643 56777777788899987 6899999999999999999
Q ss_pred c--ccccccCchhhhcCcc
Q 015368 380 L--LNQSDQISETILKLPS 396 (408)
Q Consensus 380 ~--~~kse~iP~~~~~~~~ 396 (408)
+ ++||||||++ +.+++
T Consensus 231 l~p~~kSepiPe~-~~~pV 248 (250)
T 3ec3_A 231 LKPVIKSQPVPKN-NKGAA 248 (250)
T ss_dssp CCCCC--------------
T ss_pred ccceeecCCCCCC-CCCCC
Confidence 9 9999999998 55544
No 12
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.95 E-value=2e-26 Score=200.53 Aligned_cols=210 Identities=17% Similarity=0.252 Sum_probs=182.4
Q ss_pred CCcccccChhHHHHHhccCCeEEEEEecCCCCcCHHHHHHHhccCCceeEEEecCHhHHhhcCCCCCCCCCeEEEeecCC
Q 015368 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEA 241 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~~~~~~~ 241 (408)
..+.+|.+.++++.+++.++.++|+||.++|+..++.|..+|....++.|+++.+.+++++++++ + |+|++|+..+
T Consensus 9 ~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~---~-p~i~lfk~~~ 84 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNIT---G-NTICLFRLVD 84 (227)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCC---S-SEEEEEETTT
T ss_pred CCCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCC---C-CeEEEEEecC
Confidence 45678899999999999999999999999999999999999954469999999999999999998 3 9999999876
Q ss_pred CcccccCC----cCCHHHHHHHHhcCCCCceEeeccccccccccCCccEE-EEEeeC-C-CchHHHHHHHHHHHHhcCCc
Q 015368 242 GKATPFRH----QFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPRKQL-WLFAPA-Y-GSDKVILTFEEVAKALKGKV 314 (408)
Q Consensus 242 ~~~~~y~g----~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~~~~-i~f~~~-~-~~~~~~~~~~~vA~~~~~~~ 314 (408)
..+..|+| .++.++|.+||..++.|++.++|.+|+..++..+.|.+ ++|.+. + +++++...++++|++++++
T Consensus 85 ~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~- 163 (227)
T 4f9z_D 85 NEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK- 163 (227)
T ss_dssp TEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-
Confidence 67778885 78999999999999999999999999999998887655 456553 2 4778899999999999999
Q ss_pred ceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEcc-CCccccCC-CCCChHHHHHHHHHHhcCc
Q 015368 315 NMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLN-GELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 315 ~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~-~~~~y~~~-~~~~~~~i~~Fi~~~~~gk 379 (408)
+.|+|+|+++..+. ++++.||++....|.+++++. ++++|.+. +.++.++|.+|++++++||
T Consensus 164 --i~F~~vd~~~~~~~-~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 164 --ILFILVDSGMKENG-KVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp --CEEEEEETTSGGGH-HHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred --EEEEEeCCccHhHH-HHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 99999999755533 567999998667899999987 55678775 6899999999999999996
No 13
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.94 E-value=3e-26 Score=214.14 Aligned_cols=241 Identities=21% Similarity=0.368 Sum_probs=207.6
Q ss_pred HHhHhCCCcccccChhHHHHHhccCCeEEEEEecCCCCcCHHHHHHHhccCCceeEEEecCHhHHhhcCCCCCCCCCeEE
Q 015368 156 VREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALI 235 (408)
Q Consensus 156 i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~ 235 (408)
+.....+.+..|.+.++++.+++.++.++|+||.+.++..++.|..+|....++.|+.+++.+++++++++ .|+++
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~~~~f~~~A~~~~~~~F~~t~~~~v~~~~~v~----~~~i~ 86 (361)
T 3uem_A 11 FQGPGSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLD----KDGVV 86 (361)
T ss_dssp TSCCCCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHHHHHHHHHHHHCSSSCEEEECCHHHHHHTTCS----SSEEE
T ss_pred ecCCccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchHHHHHHHHHhcCCCceEEEECcHHHHHHhCCC----CCeEE
Confidence 33344567788999999999999999999999998888899999999954489999999999999999998 39999
Q ss_pred EeecCCCcccccCCcCCHHHHHHHHhcCCCCceEeeccccccccccCCc-cEEEEEee-CCC-chHHHHHHHHHHHHhcC
Q 015368 236 FLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLTIHNAQFVFQDPR-KQLWLFAP-AYG-SDKVILTFEEVAKALKG 312 (408)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt~~~~~~~~~~~~-~~~i~f~~-~~~-~~~~~~~~~~vA~~~~~ 312 (408)
+|+..++.+..|+|+++.++|.+||..+..|++.+++.+++..++..+. +++++|+. ++. ++++...|+++|+++++
T Consensus 87 lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~ 166 (361)
T 3uem_A 87 LFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG 166 (361)
T ss_dssp EEESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT
T ss_pred EEEecCCCccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccC
Confidence 9998777889999999999999999999999999999999999998876 44555554 554 89999999999999999
Q ss_pred CcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEcc--CCccccCC-CCCChHHHHHHHHHHhcCcc--ccccccC
Q 015368 313 KVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR--DAKKYVLN-GELTLSSIKSFGEEFLEDKL--LNQSDQI 387 (408)
Q Consensus 313 ~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~--~~~~y~~~-~~~~~~~i~~Fi~~~~~gk~--~~kse~i 387 (408)
+ +.|+++|++..+ .+++++.||+.....|.+++++. ...+|.+. +.++.+.|.+|++++++|++ +.+|+++
T Consensus 167 ~---i~f~~vd~~~~~-~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~ 242 (361)
T 3uem_A 167 K---ILFIFIDSDHTD-NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQEL 242 (361)
T ss_dssp T---CEEEEECTTSGG-GHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCC
T ss_pred c---eEEEEecCChHH-HHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCC
Confidence 9 999999998433 45888999998766889988886 34678765 68999999999999999999 8999999
Q ss_pred chh-----hhcCccCCccceee
Q 015368 388 SET-----ILKLPSQSRASYQL 404 (408)
Q Consensus 388 P~~-----~~~~~~~~~~~~~~ 404 (408)
|+. +..+.+++|++.++
T Consensus 243 p~~~~~~~v~~l~~~~f~~~~~ 264 (361)
T 3uem_A 243 PEDWDKQPVKVLVGKNFEDVAF 264 (361)
T ss_dssp CTTTTTSSSEEECTTTHHHHHT
T ss_pred CcccccCCcEEeecCchhhhcc
Confidence 976 66677888887664
No 14
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.92 E-value=1.6e-23 Score=184.54 Aligned_cols=201 Identities=18% Similarity=0.275 Sum_probs=148.0
Q ss_pred CCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC---CcEEEEEeC--cccHhHHHHcCCCcC
Q 015368 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDA--YLEKDLAKEYNILAY 128 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~v~~~~v~~--~~~~~~~~~~~i~~~ 128 (408)
...+..+++++|+..+ .++++++|+|||+||++|+++.|.|+++++.+++ ++.|+.||| ++++++|++|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 4678999999999877 5569999999999999999999999999999987 899999999 678999999999999
Q ss_pred cEEEEEeCCe-----EeEEeeCCCCHHHHHHHHHhHhCCCcc---------cccChhHHHHHhcc--CCeEEEEEecCCC
Q 015368 129 PTLYLFVAGV-----RQFQFFGERTRDVISAWVREKMTLGTY---------SITTTDEAERILTV--ESKLVLGFLHDLE 192 (408)
Q Consensus 129 Pt~~~~~~g~-----~~~~~~g~~~~~~l~~~i~~~~~~~~~---------~i~~~~~~~~~~~~--~~~~vi~f~~~~~ 192 (408)
||+++|++|+ ...++.| .+.+.|.++|.+.+..... ...+.+++..++.. ....+++|... .
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~-~ 168 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXG-G 168 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECT-T
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEEC-C
Confidence 9999999642 2235666 6999999999998854331 23356778877743 34444544433 3
Q ss_pred CcCHHHHHHHhccCCceeEEEecC--HhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcC-CHHHHHHHHh
Q 015368 193 GMESEELAAASKLHSDVNFYQTTS--ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIANFVT 261 (408)
Q Consensus 193 ~~~~~~~~~~a~~~~~~~f~~~~~--~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~-~~~~i~~fi~ 261 (408)
......+.........+.+..+.+ ..++++|+++ ++|+++++..++ +...++... +.+.+..+++
T Consensus 169 ~~~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~---~~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l~ 236 (244)
T 3q6o_A 169 SYLAREVALDLSQHKGVAVRRVLNTEANVVRKFGVT---DFPSCYLLFRNG-SVSRVPVLMESRSFYTAYLQ 236 (244)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCC---CSSEEEEEETTS-CEEECCCSSSSHHHHHHHHH
T ss_pred cchHHHHHHHhccCCceEEEEEeCchHHHHHHcCCC---CCCeEEEEeCCC-CeEeeccccccHHHHHHHHH
Confidence 322222222112335566666544 8999999999 599999888754 666666443 3456666664
No 15
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.92 E-value=5.6e-24 Score=173.46 Aligned_cols=136 Identities=21% Similarity=0.306 Sum_probs=124.1
Q ss_pred CCccccccChhhhhhhccCCCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCc
Q 015368 27 QSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEA 106 (408)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v 106 (408)
.+|...+++++........|+......-...+.++++.+|+..+.++++++|+|||+||++|+.+.|.|+++++.+++++
T Consensus 18 ~~c~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v 97 (155)
T 2ppt_A 18 LACGQANKVPSDRLAAGPKCGICGAGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQV 97 (155)
T ss_dssp TTTCCEEEEEGGGTTSCCBCTTTCCBSCCSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccccccccCCcccccCCCCCCcCCccccCCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCE
Confidence 36788899998888888888886665556788999999999988788999999999999999999999999999998889
Q ss_pred EEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 107 DLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 107 ~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
.|+.||++++++++++|+|+++||+++|++|+.+.++.|..+.++|.+||++.++.
T Consensus 98 ~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 98 RLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEEEETTTSTHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999988754
No 16
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.91 E-value=1.7e-23 Score=158.29 Aligned_cols=96 Identities=23% Similarity=0.437 Sum_probs=88.3
Q ss_pred ChhhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeE
Q 015368 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (408)
Q Consensus 62 ~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~ 139 (408)
+.++|++.+. ++++++|+|||+||+||+.+.|.++++++.++ ++.|+.||++++++++++|+|+++||+++|++|+.
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~ 85 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQK 85 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCeecEEEEEECCEE
Confidence 4578988773 47899999999999999999999999999987 69999999999999999999999999999999999
Q ss_pred eEEeeCCCCHHHHHHHHHhH
Q 015368 140 QFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 140 ~~~~~g~~~~~~l~~~i~~~ 159 (408)
+.++.| .+.++|.++|+++
T Consensus 86 v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 86 LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEES-CCHHHHHHHHHHH
T ss_pred EEEEeC-cCHHHHHHHHHhc
Confidence 999999 5899999999875
No 17
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.91 E-value=1.6e-23 Score=169.86 Aligned_cols=136 Identities=19% Similarity=0.350 Sum_probs=123.2
Q ss_pred CCccccccChhhhhhhccCCCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCc
Q 015368 27 QSHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEA 106 (408)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v 106 (408)
.+|...++++.........|+..........+..+++++|+..+.++++++|+||++||++|+.+.|.|+++++.+++++
T Consensus 9 ~~c~~~n~~p~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~ 88 (148)
T 3p2a_A 9 TACMATNRLPEERIDDGAKCGRCGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKV 88 (148)
T ss_dssp TTTCCEEEEESSCSCSCCBCTTTCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTC
T ss_pred cccccccCCCCcccccCCcchhcCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCce
Confidence 35666777887777777777776666667789999999999999889999999999999999999999999999998899
Q ss_pred EEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 107 DLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 107 ~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
.|+.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.|.+||++.+..
T Consensus 89 ~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 89 RFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEEEEECcCCHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999988754
No 18
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.91 E-value=1e-22 Score=177.68 Aligned_cols=192 Identities=11% Similarity=0.149 Sum_probs=152.0
Q ss_pred hhHHHHH--cCCCcEEEEEe-----cCCChhHHhhhHHHHHHHHHh--cCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 64 KNFSEFM--GKNRNVMVMFY-----ANWCYWSKKLAPEFAAAAKML--KGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 64 ~~~~~~~--~~~~~~~v~f~-----a~wC~~C~~~~p~~~~~~~~~--~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+.++..+ ...++++|.|| +|||++|+.+.|.|.++++.+ .+++.++.|||++++++|++|+|+++||+++|
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~ 88 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE 88 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE
Confidence 3455555 33456665555 999999999999999999888 55899999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhHhC--CCcccccChhHHHHHhccCCeE-EEEEecCCCCcCHH---HHHHHhccCCc
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTVESKL-VLGFLHDLEGMESE---ELAAASKLHSD 208 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~~~~~-vi~f~~~~~~~~~~---~~~~~a~~~~~ 208 (408)
++|....+|.|.++.+++..|+...+. ..+..+ +.+.++.+...+..+ ++.|+++||.++.. .+..++...++
T Consensus 89 ~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~ 167 (229)
T 2ywm_A 89 GDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQL-SEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDY 167 (229)
T ss_dssp SSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSC-CHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTT
T ss_pred CCCcccceecCCccHHHHHHHHHHHHhccCCccCC-CHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCC
Confidence 977788999999999999999988753 344455 567788777665555 67799999998544 45555533367
Q ss_pred eeEEEe---cCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 209 VNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 209 ~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
+.++.+ .+.+++++|++. ++|++++ ++ ....|.|..+.+++.+|+...
T Consensus 168 v~~~~vd~~~~~~l~~~~~v~---~~Pt~~~--~G--~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 168 ITSKVIDASENQDLAEQFQVV---GVPKIVI--NK--GVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp EEEEEEEGGGCHHHHHHTTCC---SSSEEEE--GG--GTEEEESCCCHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHHcCCc---ccCEEEE--CC--EEEEeeCCCCHHHHHHHHHHH
Confidence 887765 467899999998 5999997 32 345589999999999999753
No 19
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.91 E-value=6.2e-23 Score=178.77 Aligned_cols=193 Identities=13% Similarity=0.178 Sum_probs=153.3
Q ss_pred hhHHHHH---cCCCcEEEEEecC-CChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc--cHhHHHHcCCCcCcEEEEEeCC
Q 015368 64 KNFSEFM---GKNRNVMVMFYAN-WCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--EKDLAKEYNILAYPTLYLFVAG 137 (408)
Q Consensus 64 ~~~~~~~---~~~~~~~v~f~a~-wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~~g 137 (408)
++++..+ .++++++|.||++ ||++|+++.|.++++++. .+++.++.|||++ ++++|++|||.++||+++|++|
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g 88 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDG 88 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCC
Confidence 4455555 2456778999999 999999999999999865 4589999999999 9999999999999999999988
Q ss_pred eEe-EEeeCCCCHHHHHHHHHhHhC--CCcccccChhHHHHHhccCCeE-EEEEecCCCCcCHH---HHHHHh-ccC---
Q 015368 138 VRQ-FQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTVESKL-VLGFLHDLEGMESE---ELAAAS-KLH--- 206 (408)
Q Consensus 138 ~~~-~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~~~~~-vi~f~~~~~~~~~~---~~~~~a-~~~--- 206 (408)
+.. .+|.|..+.+.+..|+...+. .....+ +.+.++.+...++.+ ++.|+++||.++.. .+..++ .+.
T Consensus 89 ~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~ 167 (226)
T 1a8l_A 89 KDFGVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAG 167 (226)
T ss_dssp BCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTT
T ss_pred ceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhccccc
Confidence 654 789999999999999988652 233344 556777776665656 88899999998544 455555 333
Q ss_pred -CceeEEEe---cCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 207 -SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 207 -~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
+++.++.+ .+.+++++|++. ++|++++++.+. ....|.|..+.+++.+||..
T Consensus 168 ~~~v~~~~vd~~~~~~l~~~~~v~---~~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 223 (226)
T 1a8l_A 168 KGKILGDMVEAIEYPEWADQYNVM---AVPKIVIQVNGE-DRVEFEGAYPEKMFLEKLLS 223 (226)
T ss_dssp CCCEEEEEEEGGGCHHHHHHTTCC---SSCEEEEEETTE-EEEEEESCCCHHHHHHHHHH
T ss_pred CCcEEEEEEEcccCHHHHHhCCCc---ccCeEEEEeCCc-eeEEEcCCCCHHHHHHHHHH
Confidence 47777766 567799999998 599999997543 45678899999999999975
No 20
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.90 E-value=7.1e-21 Score=177.66 Aligned_cols=302 Identities=17% Similarity=0.235 Sum_probs=231.9
Q ss_pred CCcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+.+..+ +.+++++++..++.++|.|+.+-+..+ ...|.++|+.+ +++.|+.++ +.++|+++++.. |++++|
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t~---~~~v~~~~~v~~-~~i~lf 88 (361)
T 3uem_A 17 EFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGITS---NSDVFSKYQLDK-DGVVLF 88 (361)
T ss_dssp SSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEEC---CHHHHHHTTCSS-SEEEEE
T ss_pred ccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEEC---cHHHHHHhCCCC-CeEEEE
Confidence 456667 558899999888999999998876654 46899999988 578888665 789999999998 999999
Q ss_pred eC-CeEeEEeeCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhcc-CCeEEEEEecCCCCcC---HHHHHHHh-ccCCc
Q 015368 135 VA-GVRQFQFFGERTRDVISAWVREKMTLGTYSITTTDEAERILTV-ESKLVLGFLHDLEGME---SEELAAAS-KLHSD 208 (408)
Q Consensus 135 ~~-g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~-~~~~vi~f~~~~~~~~---~~~~~~~a-~~~~~ 208 (408)
++ ......|.|..+.+.|.+||.....+.+.+++. +.+..+... .+.+++.|+.+||.+. .+.+..+| ++.++
T Consensus 89 k~f~~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~-~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~ 167 (361)
T 3uem_A 89 KKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK 167 (361)
T ss_dssp ESSTTSEEECCSCCCHHHHHHHHHHHSSCSEEECST-TTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT
T ss_pred EecCCCccccCCcCCHHHHHHHHHHcCCCcceecCc-ccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc
Confidence 84 224568899999999999999999999988854 566666654 4566777888888764 45577777 67888
Q ss_pred eeEEEec-----CHhHHhhcCCCCCCCCCeEEEeecCCCcccccC---CcCCHHHHHHHHhcCC----------------
Q 015368 209 VNFYQTT-----SADVAEFFHIHPKSKRPALIFLHLEAGKATPFR---HQFTRLAIANFVTHTK---------------- 264 (408)
Q Consensus 209 ~~f~~~~-----~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~---g~~~~~~i~~fi~~~~---------------- 264 (408)
+.|+.+. ...+++.|+++. .++|++++++.++ ....|. |.++.++|.+|+....
T Consensus 168 i~f~~vd~~~~~~~~~~~~fgi~~-~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~ 245 (361)
T 3uem_A 168 ILFIFIDSDHTDNQRILEFFGLKK-EECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 245 (361)
T ss_dssp CEEEEECTTSGGGHHHHHHTTCCT-TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTT
T ss_pred eEEEEecCChHHHHHHHHHcCCCc-cCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcc
Confidence 9998763 457899999972 1389999998743 333443 7899999999998631
Q ss_pred --CCceEeecccccccccc-CCccE-EEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccC
Q 015368 265 --HPLVVTLTIHNAQFVFQ-DPRKQ-LWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGV 339 (408)
Q Consensus 265 --~p~v~~lt~~~~~~~~~-~~~~~-~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i 339 (408)
...+..++..++..+.. .+.++ +.++.+||. |+...+.|.++|.+++++ .++.|+.+|++... ++.+++
T Consensus 246 ~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~-~~v~~~~vd~~~~~-----~~~~~v 319 (361)
T 3uem_A 246 WDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH-ENIVIAKMDSTANE-----VEAVKV 319 (361)
T ss_dssp TTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTTCB-----CSSCCC
T ss_pred cccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC-CcEEEEEEECCccc-----hhhcCC
Confidence 12377888888887663 44444 446677887 999999999999999864 24999999988643 577888
Q ss_pred CCCCCcEEEEEccC--CccccCCCCCChHHHHHHHHHHh
Q 015368 340 SGNAPRVIAYSARD--AKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 340 ~~~~~p~i~i~~~~--~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
.. .|.++++..+ .....+.|..+.+.|.+||++..
T Consensus 320 ~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 320 HS--FPTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp CS--SSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTS
T ss_pred cc--cCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcC
Confidence 53 6888888653 34567899999999999998654
No 21
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.90 E-value=4.4e-23 Score=160.36 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=97.8
Q ss_pred CCcEEcChhhHHHHHcCCC-cEEEEEecCCC--hhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 56 KDVVSLNGKNFSEFMGKNR-NVMVMFYANWC--YWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~-~~~v~f~a~wC--~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
.....+|+++|++.+.+++ +++|+|||+|| ++|+.+.|.+++++++|.+++.|++||.|++++++.+|+|+++||++
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 3566899999998886555 99999999999 99999999999999999989999999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+|++|+.+.+..|..+.+++.++|++.+
T Consensus 95 lFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999999998876
No 22
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.89 E-value=3.4e-23 Score=161.60 Aligned_cols=108 Identities=6% Similarity=0.096 Sum_probs=100.2
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCC--ChhHHhhhHHHHHHHHHhcCC-cEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW--CYWSKKLAPEFAAAAKMLKGE-ADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~w--C~~C~~~~p~~~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
.+..+++++|++.+.++++++|+|||+| |++|+.+.|.+++++++|.++ +.|++||+|++++++.+|||+++||+++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlil 97 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLV 97 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEE
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEE
Confidence 5678999999988888889999999999 999999999999999999988 9999999999999999999999999999
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHhCCCc
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGT 164 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (408)
|++|+.+.+..|..+.+.+.+||++.+..+.
T Consensus 98 Fk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~ 128 (140)
T 2qgv_A 98 FTGGNYRGVLNGIHPWAELINLMRGLVEPQQ 128 (140)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHHC---
T ss_pred EECCEEEEEEecCCCHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998885443
No 23
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.89 E-value=3.2e-22 Score=153.68 Aligned_cols=106 Identities=17% Similarity=0.323 Sum_probs=100.5
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
..+..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||+++|
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 83 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYF 83 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEE
Confidence 367899999999988 7889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++|+.+.++.|..+.+.+.+||++.++
T Consensus 84 ~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 84 KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 999999999999999999999998764
No 24
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.89 E-value=1.3e-22 Score=159.84 Aligned_cols=106 Identities=17% Similarity=0.328 Sum_probs=95.9
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhc-----CCcEEEEEeCcccHhHHHHcCCCc
Q 015368 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-----GEADLVMVDAYLEKDLAKEYNILA 127 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~-----~~v~~~~v~~~~~~~~~~~~~i~~ 127 (408)
....+..|++++|+..+ .++++++|+|||+||++|+.+.|.|+++++.+. +++.++.|||++++++|++|+|.+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 34688999999999888 468999999999999999999999999998764 379999999999999999999999
Q ss_pred CcEEEEEeCCeEe--EEeeCCCCHHHHHHHHHhH
Q 015368 128 YPTLYLFVAGVRQ--FQFFGERTRDVISAWVREK 159 (408)
Q Consensus 128 ~Pt~~~~~~g~~~--~~~~g~~~~~~l~~~i~~~ 159 (408)
+||+++|++|+.. .+|.|.++.+.|.+||.++
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999977543 6899999999999999875
No 25
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.89 E-value=2e-22 Score=155.09 Aligned_cols=105 Identities=21% Similarity=0.367 Sum_probs=99.6
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCC
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (408)
+..++.++|++.+ ++++++|+|||+||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++|++|
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 81 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDG 81 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEETT
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCC
Confidence 5688999999888 889999999999999999999999999999988899999999999999999999999999999999
Q ss_pred eEeEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 138 VRQFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
+.+.++.|..+.+++.+|+.+.++++
T Consensus 82 ~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 82 EVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999988655
No 26
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.89 E-value=2.1e-21 Score=187.32 Aligned_cols=202 Identities=15% Similarity=0.242 Sum_probs=149.7
Q ss_pred CCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC---CcEEEEEeCc--ccHhHHHHcCCCcC
Q 015368 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAY--LEKDLAKEYNILAY 128 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~v~~~~v~~~--~~~~~~~~~~i~~~ 128 (408)
...+..+++++|+..+ .++++++|+|||+||++|++++|.|+++++++++ ++.|+.|||+ +++++|++|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 4578999999999877 5679999999999999999999999999999987 7999999995 58999999999999
Q ss_pred cEEEEEe----CCeEeEEeeCCCCHHHHHHHHHhHhCCCc----------ccccChhHHHHHhccC--CeEEEEEecCCC
Q 015368 129 PTLYLFV----AGVRQFQFFGERTRDVISAWVREKMTLGT----------YSITTTDEAERILTVE--SKLVLGFLHDLE 192 (408)
Q Consensus 129 Pt~~~~~----~g~~~~~~~g~~~~~~l~~~i~~~~~~~~----------~~i~~~~~~~~~~~~~--~~~vi~f~~~~~ 192 (408)
||+++|+ +|+....+.|..+.+.+.++|.+.+.... ..+ +.++++.++... ...+++|. +..
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~i-t~~~l~~~l~~~~~~~vallF~-~~~ 168 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPA-KLNDIDGFFTRNKADYLALVFE-RED 168 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBC-CHHHHTTGGGSCCCSEEEEEEE-CTT
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcC-CHHHHHHHhccCCCCeEEEEec-CCc
Confidence 9999999 45556778888999999999999885322 333 557788877543 34445444 433
Q ss_pred CcCHHHHHHHhccCCceeEEEe--cCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCH-HHHHHHHhc
Q 015368 193 GMESEELAAASKLHSDVNFYQT--TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTR-LAIANFVTH 262 (408)
Q Consensus 193 ~~~~~~~~~~a~~~~~~~f~~~--~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~-~~i~~fi~~ 262 (408)
......+...-.....+.+..+ .+..++++|+|+ ++|+++++..++ +...++...+. ..+..++..
T Consensus 169 s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~---~~Pslvl~~~nG-k~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 169 SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVT---DFPSCYLLLRNG-SVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCC---CSSEEEEEETTS-CEEECCCSSCSHHHHHHHHTT
T ss_pred hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCC---CCCeEEEEeCCC-ceeecccccccHHHHHHHHHH
Confidence 3332222222233345666554 446899999999 489999998764 44344433322 556677664
No 27
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.88 E-value=5.3e-22 Score=151.85 Aligned_cols=105 Identities=25% Similarity=0.424 Sum_probs=100.4
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
+.+..+++++|+..+.++++++|+||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++.
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 83 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFV 83 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEc
Confidence 57789999999999988999999999999999999999999999999989999999999999999999999999999999
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+|+.+.++.|..+.+.+.++|++.+
T Consensus 84 ~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 84 NGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCcEEEeeeccCCHHHHHHHHHHHh
Confidence 9999999999999999999998765
No 28
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.88 E-value=2.4e-22 Score=155.56 Aligned_cols=105 Identities=24% Similarity=0.330 Sum_probs=96.2
Q ss_pred cCCCcEEcChhhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEE
Q 015368 54 YAKDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (408)
........+.++|++.+. ++++++|+|||+||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++||+
T Consensus 10 ~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 10 HGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp --CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEE
Confidence 345666788999999887 899999999999999999999999999999985 99999999999999999999999999
Q ss_pred EEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+++++|+.+.++.|. +.+.|.++|++.+
T Consensus 89 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEESSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEeCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999999999999999 9999999998753
No 29
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.88 E-value=1.6e-22 Score=159.42 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=92.7
Q ss_pred cEEcC-hhhHHHHH--cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 58 VVSLN-GKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 58 ~~~l~-~~~~~~~~--~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+..++ ..+|++.+ .++++|+|.|||+||+||+.+.|.++++++++++++.|++||+|++++++++|+|+++||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 55564 58898766 3678999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEe--E-------EeeCCCC-HHHHHHHHHhHh
Q 015368 135 VAGVRQ--F-------QFFGERT-RDVISAWVREKM 160 (408)
Q Consensus 135 ~~g~~~--~-------~~~g~~~-~~~l~~~i~~~~ 160 (408)
++|+.+ . +..|..+ .++|.++|+..+
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999776 4 7889887 999999998776
No 30
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.88 E-value=6.7e-22 Score=150.52 Aligned_cols=104 Identities=21% Similarity=0.367 Sum_probs=98.3
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
..+..++.++|+..+ ++++++|+||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++++
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFK 81 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEe
Confidence 367889999999988 8899999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+|+.+.++.|..+.+++.++|++.+
T Consensus 82 ~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 82 DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 9999999999999999999998753
No 31
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.88 E-value=7.3e-22 Score=158.45 Aligned_cols=112 Identities=31% Similarity=0.512 Sum_probs=103.9
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCC---cEEEEEeCcccHhHHHHcCCCcCcE
Q 015368 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE---ADLVMVDAYLEKDLAKEYNILAYPT 130 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (408)
....+..+++++|+..+.++++++|+||++||++|+.+.|.|.++++.+++. +.++.||++++.+++++|+|.++||
T Consensus 15 ~~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPT 94 (140)
T ss_dssp EETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSE
T ss_pred CCCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCe
Confidence 4567899999999999988999999999999999999999999999999874 9999999999999999999999999
Q ss_pred EEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCCCccc
Q 015368 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLGTYS 166 (408)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~ 166 (408)
+++|++|+ +.++.|..+.+.|.+||.+.+.+....
T Consensus 95 ~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 95 IKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEETTE-EEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred EEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 99999997 788999999999999999999766543
No 32
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.88 E-value=8.7e-22 Score=150.47 Aligned_cols=105 Identities=21% Similarity=0.402 Sum_probs=98.2
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+.+..+++++|+..+ .++++++|+||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 467889999999655 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++|+.+.++.|..+.+.+.+|+++.+
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 99999999999999999999998875
No 33
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.88 E-value=6.8e-22 Score=150.24 Aligned_cols=103 Identities=21% Similarity=0.420 Sum_probs=97.0
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCC
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (408)
+..+++++|+..+.++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++++|
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 81 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGG 81 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeCC
Confidence 56889999998888899999999999999999999999999999988899999999999999999999999999999999
Q ss_pred eEeEEeeCCCCHHHHHHHHHhHh
Q 015368 138 VRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+.+.++.|..+.+.+.+++.+.+
T Consensus 82 ~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 82 RPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEEEEEESCCCHHHHHHHTTTTT
T ss_pred eEEEEEecCCCHHHHHHHHHHHh
Confidence 98899999999999999987654
No 34
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.87 E-value=1.8e-21 Score=151.48 Aligned_cols=111 Identities=24% Similarity=0.354 Sum_probs=100.9
Q ss_pred CCccCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCc
Q 015368 51 PLLYAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (408)
Q Consensus 51 ~~~~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (408)
+....+.+..+++++|++.+ .++++++|+||++||++|+.+.|.+.++++.+++++.++.||++++++++++|+|.++|
T Consensus 8 ~~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~P 87 (119)
T 1w4v_A 8 HHHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVP 87 (119)
T ss_dssp --CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSS
T ss_pred ccCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCccc
Confidence 34455788899999999765 67899999999999999999999999999999888999999999999999999999999
Q ss_pred EEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++++|++|+.+.++.|..+.+.|.+||++.++
T Consensus 88 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 88 TVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 99999999988999999999999999988763
No 35
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.87 E-value=1.4e-21 Score=156.57 Aligned_cols=107 Identities=21% Similarity=0.371 Sum_probs=100.6
Q ss_pred CCCcEEcChhhHH-HHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 55 AKDVVSLNGKNFS-EFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 55 ~~~~~~l~~~~~~-~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
...+..+++++|. ..+.++++++|+||++||++|+.+.|.+.++++.+++++.|+.||++++++++++|+|.++||+++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 3578899999999 566778999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
|++|+.+.++.|..+.+.|.+||.+.+.
T Consensus 85 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999998874
No 36
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.87 E-value=2e-21 Score=148.53 Aligned_cols=105 Identities=24% Similarity=0.438 Sum_probs=99.0
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeC
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~ 136 (408)
.+..+++++|+..+.++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|++.++|++++|++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKD 81 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeC
Confidence 57789999999888889999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 137 GVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
|+.+.++.|..+.+.+.+|+.+.++
T Consensus 82 g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 82 GQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp TEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred CcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 9888999999999999999998764
No 37
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=1.9e-21 Score=154.50 Aligned_cols=107 Identities=36% Similarity=0.584 Sum_probs=100.0
Q ss_pred CCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhc----CCcEEEEEeCcccHhHHHHcCCCcCc
Q 015368 55 AKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYP 129 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~----~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (408)
...+..++.++|+..+ .++++++|+|||+||++|+.+.|.+.++++.++ +++.|+.||++++++++++|+|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 4578899999999876 678999999999999999999999999999997 68999999999999999999999999
Q ss_pred EEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
|+++|++|+.+.++.|..+.+.+.+|+.+.+.
T Consensus 86 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 86 TIKIFQKGESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 99999999888999999999999999998874
No 38
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.87 E-value=3.3e-21 Score=148.27 Aligned_cols=106 Identities=19% Similarity=0.390 Sum_probs=98.3
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
..+..+++++|...+ .++++++|.||++||++|+.+.|.+.++++.+++++.++.||++++++++++|+|.++||++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 84 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY 84 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE
Confidence 467889999998655 6789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++|+.+.++.|..+.+.+.+++++.+.
T Consensus 85 ~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 85 QGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999988763
No 39
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.87 E-value=3.8e-21 Score=147.07 Aligned_cols=102 Identities=25% Similarity=0.364 Sum_probs=94.5
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeC
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~ 136 (408)
.....+.++|+..+.++++++|+|||+||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||++++++
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 86 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELGDVAQKNEVSAMPTLLLFKN 86 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCccCEEEEEEC
Confidence 44567889999999999999999999999999999999999999997 59999999999999999999999999999999
Q ss_pred CeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 137 GVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
|+.+.++.|. +.+.|.++|++++
T Consensus 87 G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 87 GKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CEEEEEEeCC-CHHHHHHHHHhhC
Confidence 9999999999 7799999998753
No 40
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.87 E-value=1.1e-21 Score=168.52 Aligned_cols=116 Identities=20% Similarity=0.418 Sum_probs=108.1
Q ss_pred cCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 54 YAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
....+..+++++|+..+.++++++|+|||+||++|+.+.|.|+++++.+++++.|+.|||++++++|++|+|.++||+++
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 174 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFI 174 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEE
Confidence 34578899999999988889999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHhCCCcccccC
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSITT 169 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~ 169 (408)
|.+|+.+.++.|..+.+.|.+||.+.+.+.+.+|++
T Consensus 175 ~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~~i~~ 210 (210)
T 3apq_A 175 FRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELST 210 (210)
T ss_dssp ECTTSCCEECCSCCCHHHHHHHHHHHHHCCSSCC--
T ss_pred EECCCceeEecCCCCHHHHHHHHHHhCcccceecCC
Confidence 999988999999999999999999999988888753
No 41
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.87 E-value=3e-21 Score=147.12 Aligned_cols=104 Identities=21% Similarity=0.400 Sum_probs=97.4
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+.+..+++++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++|++++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 468899999999765 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhH
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
++|+.+.++.|..+.+.+.+||++.
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 82 RDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred eCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9999899999999999999999875
No 42
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.87 E-value=2.8e-21 Score=148.39 Aligned_cols=103 Identities=28% Similarity=0.524 Sum_probs=96.8
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC---CcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
+.+..+++++|++.+. +++++|+||++||++|+.+.|.+.++++.+.. ++.++.||++++++++++|+|.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEE
Confidence 5788999999999887 78999999999999999999999999998753 7999999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhH
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
++++|+.+.++.|..+.+.|.+||+++
T Consensus 84 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 84 LFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 999999999999999999999999875
No 43
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.87 E-value=5e-21 Score=147.92 Aligned_cols=106 Identities=19% Similarity=0.330 Sum_probs=99.6
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+.+..+++++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++|+++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 86 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLV 86 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEE
Confidence 468899999999765 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++|+.+.++.|..+.+.+.+|+++.++
T Consensus 87 ~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 87 KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 999988999999999999999998875
No 44
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.87 E-value=3.9e-21 Score=145.56 Aligned_cols=103 Identities=24% Similarity=0.448 Sum_probs=97.1
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCC
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (408)
+..+++++|++.+.++++++|.||++||++|+.+.|.++++++.+++ +.++.||++++++++++|++.++||++++++|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g 79 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKDG 79 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEETT
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEECC
Confidence 45789999999888899999999999999999999999999999986 99999999999999999999999999999999
Q ss_pred eEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 138 VRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+.+.++.|..+.+.+.+|+++.++
T Consensus 80 ~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 80 EPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHT
T ss_pred eEhhhccCCCCHHHHHHHHHHHhc
Confidence 888999999999999999998764
No 45
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.86 E-value=2.8e-21 Score=155.01 Aligned_cols=132 Identities=21% Similarity=0.249 Sum_probs=84.9
Q ss_pred CccccccChhhhhhhccCCCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcE
Q 015368 28 SHEDLKAEPDELELTNLNNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEAD 107 (408)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~ 107 (408)
+|...+.++.........++.+.+.. +.+..+++++|+..+.+++.++|+||++||++|+.+.|.++++++.+++++.
T Consensus 7 ~~~~~~~~~~~r~~~~~~~~~c~~~~--~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~ 84 (140)
T 1v98_A 7 KCGAKNRLGTPPPGQVPVCGACKTPL--PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLK 84 (140)
T ss_dssp --------------------------------------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEE
T ss_pred cccccccCCcccccCCcccccccCCC--CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceE
Confidence 34555666655554444444433322 6788999999998875554599999999999999999999999999988899
Q ss_pred EEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 108 LVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 108 ~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
|+.||++++++++++|+|.++||+++|++|+.+.++.|..+.+.+.+||.+.+.
T Consensus 85 ~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 85 VVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999999999999999999999999989999999999999999998874
No 46
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.86 E-value=2.1e-21 Score=152.91 Aligned_cols=105 Identities=21% Similarity=0.405 Sum_probs=98.4
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
..+..++.++|+..+ .++++++|+||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||+++|
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 468899999999654 6789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++|+.+.++.|..+.++|.+||++.+
T Consensus 102 ~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 102 KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 99998999999999999999998875
No 47
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.86 E-value=4.3e-21 Score=146.27 Aligned_cols=104 Identities=23% Similarity=0.383 Sum_probs=96.8
Q ss_pred CcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 57 DVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 57 ~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
.+..+++++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 36788999999765 67899999999999999999999999999999888999999999999999999999999999999
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+|+.+.++.|..+.+.+.+++++.+
T Consensus 82 ~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 82 GGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9988899999999999999998765
No 48
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=3.8e-21 Score=151.27 Aligned_cols=110 Identities=25% Similarity=0.424 Sum_probs=99.6
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
...+..+++++|++.+.+ .++|+|||+||++|+.+.|.++++++.+++ ++.|+.||++++++++++|+|.++||+++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 83 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYH 83 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEE
Confidence 357889999999987743 399999999999999999999999999986 89999999999999999999999999999
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHhCCCcccc
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKMTLGTYSI 167 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i 167 (408)
|++|+ +.++.|..+.+.|.+||.+.+...+..+
T Consensus 84 ~~~G~-~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 116 (126)
T 1x5e_A 84 CKDGE-FRRYQGPRTKKDFINFISDKEWKSIEPV 116 (126)
T ss_dssp EETTE-EEECCSCCCHHHHHHHHHTCGGGGSCEE
T ss_pred EeCCe-EEEeecCCCHHHHHHHHHHHhhccCCCc
Confidence 99996 6889999999999999999887665554
No 49
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.86 E-value=6e-22 Score=150.52 Aligned_cols=97 Identities=9% Similarity=0.116 Sum_probs=79.9
Q ss_pred hhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEE
Q 015368 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQ 142 (408)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~ 142 (408)
.++|++.+.++++++|+|||+||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++||+++|++|+.+.+
T Consensus 8 ~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~ 86 (105)
T 4euy_A 8 IEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEILR 86 (105)
T ss_dssp --CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEEETTEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEEEE
Confidence 45566666788999999999999999999999999999985 79999999999999999999999999999999999999
Q ss_pred eeCCCCHHHHHHHHHhHh
Q 015368 143 FFGERTRDVISAWVREKM 160 (408)
Q Consensus 143 ~~g~~~~~~l~~~i~~~~ 160 (408)
+.|..+.++|.+++++.+
T Consensus 87 ~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 87 ESRFISLENLERTIQLFE 104 (105)
T ss_dssp EESSCCHHHHHHHHHTTC
T ss_pred EeCCcCHHHHHHHHHHhh
Confidence 999999999999998764
No 50
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.86 E-value=9.4e-21 Score=144.41 Aligned_cols=102 Identities=23% Similarity=0.286 Sum_probs=91.1
Q ss_pred cEEc-ChhhHHHHH--cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 58 VVSL-NGKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 58 ~~~l-~~~~~~~~~--~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+..+ +.++|++.+ .++++++|+|||+||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||++++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 3444 568899888 578999999999999999999999999999994 799999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++|+.+.++.|.. .++|.+||++.++
T Consensus 82 ~~G~~~~~~~G~~-~~~l~~~l~~~lg 107 (107)
T 1gh2_A 82 RNKVRIDQYQGAD-AVGLEEKIKQHLE 107 (107)
T ss_dssp ETTEEEEEEESSC-HHHHHHHHHHHHC
T ss_pred ECCeEEEEEeCCC-HHHHHHHHHHhcC
Confidence 9999899999964 4569999988763
No 51
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.86 E-value=1.2e-20 Score=147.77 Aligned_cols=104 Identities=18% Similarity=0.306 Sum_probs=96.8
Q ss_pred CCcEEcCh-hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l~~-~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
..+..++. ++|++.+.++++++|+|||+||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||++++
T Consensus 19 ~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 19 PSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFIIA 97 (125)
T ss_dssp SCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 45889998 9999999889999999999999999999999999999985 799999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++|+.+.++.| .+.+.|.++|.+.+.
T Consensus 98 ~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 98 RSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp ETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred eCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99998899999 688999999988763
No 52
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.86 E-value=9.8e-21 Score=143.73 Aligned_cols=103 Identities=26% Similarity=0.462 Sum_probs=95.8
Q ss_pred cEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeC
Q 015368 58 VVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (408)
Q Consensus 58 ~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~ 136 (408)
+..+++++|+..+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKN 81 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeC
Confidence 5678999999866 567899999999999999999999999999998889999999999999999999999999999999
Q ss_pred CeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 137 GVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
|+.+.++.|..+.+.+.++|++.+
T Consensus 82 g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 82 GERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp TEEEEEEEECCCHHHHHHHHHHHC
T ss_pred CeEEEEEecCCCHHHHHHHHHhhC
Confidence 999999999999999999998753
No 53
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.86 E-value=1e-20 Score=150.85 Aligned_cols=107 Identities=23% Similarity=0.369 Sum_probs=97.8
Q ss_pred CCCcEEcChhhHHHHHc------------CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHH
Q 015368 55 AKDVVSLNGKNFSEFMG------------KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKE 122 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~------------~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~ 122 (408)
...+..++.++|...+. ++++++|+|||+||++|+.+.|.++++++.+++++.++.||++++++++++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence 34688999999998774 468999999999999999999999999999988899999999999999999
Q ss_pred cCCCcCcEEEEE-eCCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 123 YNILAYPTLYLF-VAGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 123 ~~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
|+|.++||+++| .+|+.+ ++.|..+.+.|.+||++.++.
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp TTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred cCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 999999999999 589665 889999999999999998754
No 54
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.86 E-value=1.2e-20 Score=145.16 Aligned_cols=104 Identities=24% Similarity=0.416 Sum_probs=95.5
Q ss_pred CcEEc-ChhhHHHHHcC----CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEE
Q 015368 57 DVVSL-NGKNFSEFMGK----NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 57 ~~~~l-~~~~~~~~~~~----~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (408)
.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||+
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 46667 57889988864 89999999999999999999999999999987899999999999999999999999999
Q ss_pred EEEeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 132 YLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+++++|+.+.++.|. +.+.+.++|++.+.
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 999999988999998 99999999988763
No 55
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=5e-21 Score=151.46 Aligned_cols=107 Identities=28% Similarity=0.466 Sum_probs=98.2
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
....+..++.++|+..+ .++++++|+||++||++|+.+.|.++++++.+++.+.|+.||++++++++++|+|.++||++
T Consensus 15 ~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 94 (130)
T 2dml_A 15 SSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIK 94 (130)
T ss_dssp TTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEE
T ss_pred CCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEE
Confidence 34678999999999855 67899999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeCCeE-eEEeeCCCCHHHHHHHHHhHh
Q 015368 133 LFVAGVR-QFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 133 ~~~~g~~-~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+|++|.. +.++.|..+.+.+.+|+.+.+
T Consensus 95 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp EESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 9996644 789999999999999999876
No 56
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.85 E-value=6.5e-21 Score=153.07 Aligned_cols=108 Identities=20% Similarity=0.404 Sum_probs=96.3
Q ss_pred ccCCCcEEcChhhHHHHHc------------CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHH
Q 015368 53 LYAKDVVSLNGKNFSEFMG------------KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA 120 (408)
Q Consensus 53 ~~~~~~~~l~~~~~~~~~~------------~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~ 120 (408)
.....+..++..+|...+. ++++++|+||++||++|+.+.|.+.++++.+++++.++.||++++++++
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 98 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELA 98 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHH
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHH
Confidence 3456889999999998875 3799999999999999999999999999999989999999999999999
Q ss_pred HHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 121 KEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 121 ~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++|+|.++||+++|+ +|+. .++.|..+.+.|.++|++.+.
T Consensus 99 ~~~~v~~~Pt~~~~~~~g~~-~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 99 RDFGIQSIPTIWFVPMKGEP-QVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHTTCCSSSEEEEECSSSCC-EEEESCCCHHHHHHHHHHTTC
T ss_pred HHcCCCCcCEEEEEeCCCCE-EEEeCCCCHHHHHHHHHHHHc
Confidence 999999999999996 7754 489999999999999998764
No 57
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.85 E-value=1.2e-21 Score=152.68 Aligned_cols=109 Identities=37% Similarity=0.623 Sum_probs=101.1
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC---CcEEEEEeCcccHhHHHHcCCCcCcEE
Q 015368 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (408)
.+.+..++.++|+..+.++++++|.||++||++|+.+.|.+.++++.+++ ++.++.||++++++++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp ETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 35788999999999998899999999999999999999999999999874 799999999999999999999999999
Q ss_pred EEEeCCeEe--EEeeCCCCHHHHHHHHHhHhCCC
Q 015368 132 YLFVAGVRQ--FQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 132 ~~~~~g~~~--~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
++|++|+.+ .++.|..+.+.|.+|+++.++++
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 999999766 89999999999999999988765
No 58
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.85 E-value=1.1e-20 Score=145.21 Aligned_cols=103 Identities=19% Similarity=0.377 Sum_probs=96.7
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
+....++.++|++.+.++++++|+||++||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++||+++++
T Consensus 9 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 87 (112)
T 1syr_A 9 MVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPTFKVYK 87 (112)
T ss_dssp CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSSSEEEEEE
T ss_pred eEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcccEEEEEE
Confidence 567789999999999899999999999999999999999999999987 6999999999999999999999999999999
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+|+.+.++.|. +.+.|.++|++.+
T Consensus 88 ~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 88 NGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred CCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 99988999999 9999999998754
No 59
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.85 E-value=8.6e-21 Score=148.07 Aligned_cols=107 Identities=20% Similarity=0.374 Sum_probs=98.1
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
....+..++.++|...+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 89 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 89 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 34578899999998654 67899999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++++|+.+.++.|..+.+.+.++|.+.+
T Consensus 90 ~~~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 90 LFKDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred EEECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 9999998899999999999999998765
No 60
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.85 E-value=1.7e-20 Score=144.06 Aligned_cols=104 Identities=21% Similarity=0.331 Sum_probs=94.9
Q ss_pred CCCcEEcChhhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc-ccHhHHHHcCCCcCcEE
Q 015368 55 AKDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTL 131 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~-~~~~~~~~~~i~~~Pt~ 131 (408)
...+..++.++|+..+. ++++++|+||++||++|+.+.|.++++++.++ ++.++.||++ ++++++++|+|.++||+
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~~~~~~~~v~~~Pt~ 82 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTF 82 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSBSSEE
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCcchHHHHHHcCCCeeeEE
Confidence 35788999999998885 58999999999999999999999999999987 5999999998 78999999999999999
Q ss_pred EEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 132 YLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+++++|+.+.++.|.. .+.|.++|++.+
T Consensus 83 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 83 KILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp EEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 8888998888999984 899999998764
No 61
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.85 E-value=8.8e-21 Score=155.13 Aligned_cols=111 Identities=11% Similarity=0.212 Sum_probs=97.4
Q ss_pred CCCcEEcChhhHHHHHcC--CCcEEEEEec-------CCChhHHhhhHHHHHHHHHhc-----CCcEEEEEeCcccHhHH
Q 015368 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYA-------NWCYWSKKLAPEFAAAAKMLK-----GEADLVMVDAYLEKDLA 120 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~--~~~~~v~f~a-------~wC~~C~~~~p~~~~~~~~~~-----~~v~~~~v~~~~~~~~~ 120 (408)
...++.||+.+|++.+.+ +.+++|.||| +||++|+.+.|+|+++++++. +++.|++||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 357899999999988753 4589999999 499999999999999999998 78999999999999999
Q ss_pred HHcCCCcCcEEEEEeCCeEe------------EEe---eC-CCCHHHHHHHHHhHhCCCcc
Q 015368 121 KEYNILAYPTLYLFVAGVRQ------------FQF---FG-ERTRDVISAWVREKMTLGTY 165 (408)
Q Consensus 121 ~~~~i~~~Pt~~~~~~g~~~------------~~~---~g-~~~~~~l~~~i~~~~~~~~~ 165 (408)
++|||+++||+++|++|... .+| .| .++++.|.+||.+.++..+.
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~ 157 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISIT 157 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCcc
Confidence 99999999999999977422 345 35 89999999999999986653
No 62
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.85 E-value=5.4e-21 Score=149.45 Aligned_cols=107 Identities=27% Similarity=0.448 Sum_probs=96.3
Q ss_pred CCcEEcChhhHHH-HHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSLNGKNFSE-FMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l~~~~~~~-~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+.+..++.++|.. .+.++++++|+|||+||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++||+++|
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 82 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLY 82 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEE
Confidence 4688999999964 557889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCeEeEEeeCC----CCHHHHHHHHHhHhCC
Q 015368 135 VAGVRQFQFFGE----RTRDVISAWVREKMTL 162 (408)
Q Consensus 135 ~~g~~~~~~~g~----~~~~~l~~~i~~~~~~ 162 (408)
++|..+.++.|. .+.+.|.+|+.+.+..
T Consensus 83 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 83 QYERAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEGGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred eCCCccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 865456777775 8999999999988743
No 63
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.85 E-value=2.8e-20 Score=145.42 Aligned_cols=104 Identities=22% Similarity=0.322 Sum_probs=96.0
Q ss_pred CCcEEcChhhHHHHHc----CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEE
Q 015368 56 KDVVSLNGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (408)
..+..++.++|+..+. ++++++|.||++||++|+.+.|.++++++.+++ +.|+.||++++++++++|+|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEE
Confidence 4567789999998774 589999999999999999999999999999985 99999999999999999999999999
Q ss_pred EEEeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 132 YLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+++++|+.+.++.|.. .+.+.+||++.+.
T Consensus 92 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 9999999899999999 9999999998774
No 64
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.7e-20 Score=144.22 Aligned_cols=102 Identities=16% Similarity=0.295 Sum_probs=89.8
Q ss_pred cEEcCh-hhHHHHHcC---CCcEEEEEecCCChhHHhhhHHHHHHHHHhc-CCcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 58 VVSLNG-KNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 58 ~~~l~~-~~~~~~~~~---~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~-~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
+..++. ++|++.+.+ +++++|+|||+||++|+.+.|.++++++.++ .++.++.||++++++++++|+|.++||++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 566776 899988865 8999999999999999999999999999963 37999999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++++|+.+.++.|.. .++|.++|++.+
T Consensus 82 ~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 108 (112)
T 3d6i_A 82 IIHKGTILKELSGAD-PKEYVSLLEDCK 108 (112)
T ss_dssp EEETTEEEEEECSCC-HHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCC-HHHHHHHHHHHH
Confidence 999999999999984 556999998775
No 65
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.85 E-value=2.6e-20 Score=141.64 Aligned_cols=101 Identities=22% Similarity=0.418 Sum_probs=92.9
Q ss_pred cEEcCh-hhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 58 VVSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 58 ~~~l~~-~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
+..++. ++|+..+. ++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|++.++||++++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 456766 88988886 789999999999999999999999999999977899999999999999999999999999999
Q ss_pred eCCeEeEEeeCCCCHHHHHHHHHhH
Q 015368 135 VAGVRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 135 ~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
++|+.+.++.| .+.+.+.++|++.
T Consensus 82 ~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 KNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred cCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 99998999999 7899999999865
No 66
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.85 E-value=7.8e-21 Score=153.61 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=92.8
Q ss_pred cChhhHHHHH--cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCe
Q 015368 61 LNGKNFSEFM--GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGV 138 (408)
Q Consensus 61 l~~~~~~~~~--~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~ 138 (408)
.+.++|+..+ .++++++|+|||+||++|+.+.|.++++++++++++.++.||++++++++++|+|.++||++++++|+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ 88 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe
Confidence 4678899877 56899999999999999999999999999999878999999999999999999999999999999998
Q ss_pred Ee---------EEeeC-CCCHHHHHHHHHhHh
Q 015368 139 RQ---------FQFFG-ERTRDVISAWVREKM 160 (408)
Q Consensus 139 ~~---------~~~~g-~~~~~~l~~~i~~~~ 160 (408)
.+ .++.| ..+.++|.+++++..
T Consensus 89 ~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 89 HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp EEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred EEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 88 89999 899999999998775
No 67
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.85 E-value=2.8e-21 Score=152.45 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=89.5
Q ss_pred cChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEe
Q 015368 61 LNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQ 140 (408)
Q Consensus 61 l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~ 140 (408)
++++.++....++++++|+|||+||++|+++.|.++++++.+++++.++.||++++++++++|+|.++||++++++|+.+
T Consensus 30 ~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 30 NGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 34444445556789999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred EEeeCCCCHHHHHHHHHh
Q 015368 141 FQFFGERTRDVISAWVRE 158 (408)
Q Consensus 141 ~~~~g~~~~~~l~~~i~~ 158 (408)
.++.|..+.++|.+||++
T Consensus 110 ~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 110 ARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEESSCCCHHHHHHHHTT
T ss_pred EEecCCCCHHHHHHHHHh
Confidence 999999999999999875
No 68
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.85 E-value=3e-20 Score=141.05 Aligned_cols=97 Identities=25% Similarity=0.387 Sum_probs=90.5
Q ss_pred ChhhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeE
Q 015368 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (408)
Q Consensus 62 ~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~ 139 (408)
+.++|+..+. ++++++|.||++||++|+.+.|.++++++.+++ +.++.||++++++++++|+|.++||++++++|+.
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 85 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQK 85 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeE
Confidence 5678888886 789999999999999999999999999999975 9999999999999999999999999999999999
Q ss_pred eEEeeCCCCHHHHHHHHHhHh
Q 015368 140 QFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 140 ~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+.++.|. +.+.+.+++++.+
T Consensus 86 ~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 86 VGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEeCC-CHHHHHHHHHHhC
Confidence 9999999 9999999998753
No 69
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.84 E-value=1.9e-20 Score=162.22 Aligned_cols=112 Identities=20% Similarity=0.361 Sum_probs=103.4
Q ss_pred CccCCCcEEcChhhHHHH-HcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcE
Q 015368 52 LLYAKDVVSLNGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (408)
Q Consensus 52 ~~~~~~~~~l~~~~~~~~-~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (408)
......+..+|.++|+.. +.++++++|+|||+||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++||
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPT 87 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSE
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCE
Confidence 345578899999999975 5788999999999999999999999999999999889999999999999999999999999
Q ss_pred EEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
++++++|+.+.++.|..+.+.+.+|+++.+...
T Consensus 88 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 88 LLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred EEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 999999999999999999999999999998543
No 70
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.84 E-value=1.5e-20 Score=169.72 Aligned_cols=107 Identities=22% Similarity=0.405 Sum_probs=101.0
Q ss_pred CCCcEEcChhhHHHHHcC--CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~--~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
.+.+..+|.++|+..+.. +++++|+|||+||++|+.+.|.++++++++++++.|+.|||+++++++++|+|.++||++
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 85 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVY 85 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEE
Confidence 357899999999998854 799999999999999999999999999999988999999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+|++|+.+.++.|..+.+.+..|+.+.++
T Consensus 86 ~~~~G~~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 86 LFQNGQPVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred EEECCEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 99999999999999999999999998874
No 71
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.84 E-value=3.1e-20 Score=143.98 Aligned_cols=101 Identities=26% Similarity=0.448 Sum_probs=93.1
Q ss_pred CcEEcCh-hhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 57 DVVSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 57 ~~~~l~~-~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
.+..++. ++|+..+. ++++++|.|||+||++|+.+.|.++++++.+ ++.++.||++++++++++|+|.++||+++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 3778887 89998886 7899999999999999999999999999988 79999999999999999999999999999
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+++|+.+.++.| .+.+.+.++|++.+
T Consensus 92 ~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 92 IKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 999999999999 68899999998753
No 72
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.84 E-value=2.6e-20 Score=143.55 Aligned_cols=100 Identities=23% Similarity=0.401 Sum_probs=90.6
Q ss_pred CcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 57 ~~~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
.+..+ +.++|+..+.++++++|+||++||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++||+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 91 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLGK 91 (114)
T ss_dssp GSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEEE
T ss_pred heeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEEe
Confidence 33444 4567788888899999999999999999999999999999985 999999999999999999999999999999
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHh
Q 015368 136 AGVRQFQFFGERTRDVISAWVRE 158 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~ 158 (408)
+|+.+.++.|.. .+.|.++|++
T Consensus 92 ~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 92 DGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp TTEEEEEEESSC-HHHHHHHHHT
T ss_pred CCeEEEEEeCCC-HHHHHHHHHh
Confidence 999999999998 9999999875
No 73
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.84 E-value=1.2e-20 Score=150.21 Aligned_cols=105 Identities=14% Similarity=0.197 Sum_probs=96.1
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC---------cccHhHHHHcCC
Q 015368 55 AKDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA---------YLEKDLAKEYNI 125 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~---------~~~~~~~~~~~i 125 (408)
...+..++.++|+..+.+ +++|+|||+||++|+.+.|.++++++.++ +.|+.||+ +++++++++|+|
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v 90 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGV 90 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCC
Confidence 356888999999998866 99999999999999999999999999986 99999999 889999999999
Q ss_pred CcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 126 LAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 126 ~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
.++||++++++|+.+.++.|..+.+.+.+++++.+.++
T Consensus 91 ~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 91 EGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp CSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred ceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999988654
No 74
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.84 E-value=1.2e-20 Score=148.35 Aligned_cols=96 Identities=17% Similarity=0.222 Sum_probs=89.5
Q ss_pred HHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEe--CcccHhHHHHcCCCcCcEEEEEe-CCeEeEEee
Q 015368 68 EFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--AYLEKDLAKEYNILAYPTLYLFV-AGVRQFQFF 144 (408)
Q Consensus 68 ~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~--~~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~ 144 (408)
....++++++|+||++||++|+.+.|.++++++.+++++.++.|| ++++.+++++|+|.++||+++++ +|+.+.++.
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~ 100 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQ 100 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEE
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEec
Confidence 445678999999999999999999999999999997789999999 99999999999999999999999 999889999
Q ss_pred CCCCHHHHHHHHHhHhCCC
Q 015368 145 GERTRDVISAWVREKMTLG 163 (408)
Q Consensus 145 g~~~~~~l~~~i~~~~~~~ 163 (408)
|..+.+.|.++|++.+.+.
T Consensus 101 G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 101 GLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp SCCCHHHHHHHHHHHCCCC
T ss_pred CCCCHHHHHHHHHHHhccc
Confidence 9999999999999988654
No 75
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.84 E-value=4.2e-21 Score=150.03 Aligned_cols=105 Identities=21% Similarity=0.402 Sum_probs=91.4
Q ss_pred CCcEEcChhhHHHHH-cCCCcEEEEEecCCCh--------------hHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHH
Q 015368 56 KDVVSLNGKNFSEFM-GKNRNVMVMFYANWCY--------------WSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA 120 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~--------------~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~ 120 (408)
+.+..+++++|+..+ .++++++|+|||+||+ +|+.+.|.++++++.+++++.++.||++++++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 467889999998554 7789999999999999 9999999999999999878999999999999999
Q ss_pred HHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 121 ~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++|+|.++||+++|++|+.+.++.|..+.+++.+||++.+
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999998999999999999999998765
No 76
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=151.33 Aligned_cols=133 Identities=27% Similarity=0.422 Sum_probs=105.2
Q ss_pred HHhcCCCCceEeeccccccccccCCccEEEE-EeeCC--CchHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhh
Q 015368 259 FVTHTKHPLVVTLTIHNAQFVFQDPRKQLWL-FAPAY--GSDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQ 335 (408)
Q Consensus 259 fi~~~~~p~v~~lt~~~~~~~~~~~~~~~i~-f~~~~--~~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~ 335 (408)
-+.+++.|+|.++|.+|+..++..+.+.+++ |.... +.+.+...++++|++++++ +.|+++|.....+ .+.++
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk---i~Fv~vd~~~~~~-~~~l~ 82 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK---ILFAFIDSDHTDN-QRILE 82 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT---CEEEEECTTCGGG-HHHHH
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc---eEEEEEecchHhH-HHHHH
Confidence 3567899999999999999999998877654 66433 2667899999999999999 9999999854443 35779
Q ss_pred hccCCCCCCcEEEEEcc--CCccccCC-CCCChHHHHHHHHHHhcCcc--ccccccCchhhhcCc
Q 015368 336 EFGVSGNAPRVIAYSAR--DAKKYVLN-GELTLSSIKSFGEEFLEDKL--LNQSDQISETILKLP 395 (408)
Q Consensus 336 ~~~i~~~~~p~i~i~~~--~~~~y~~~-~~~~~~~i~~Fi~~~~~gk~--~~kse~iP~~~~~~~ 395 (408)
.||++.+..|+++|.+. ++++|.+. ++++.+.|.+|++++++|++ ++||||||++|+.++
T Consensus 83 ~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~wn~~p 147 (147)
T 3bj5_A 83 FFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQP 147 (147)
T ss_dssp HTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGGC---
T ss_pred HcCCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCCcCCCC
Confidence 99998777899999875 57889976 79999999999999999999 999999999987653
No 77
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.84 E-value=7.5e-20 Score=143.19 Aligned_cols=104 Identities=25% Similarity=0.369 Sum_probs=94.2
Q ss_pred CCCcEEc-ChhhHHHHHc----CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCc
Q 015368 55 AKDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (408)
Q Consensus 55 ~~~~~~l-~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (408)
...+..+ +.++|+..+. ++++++|+||++||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++|
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~P 93 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAMP 93 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSSS
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCccC
Confidence 3467777 7789987774 48999999999999999999999999999987 7999999999999999999999999
Q ss_pred EEEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
|++++++|+.+.++.| .+.+.+.++|++.+
T Consensus 94 t~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 94 TFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp EEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 9999999998899999 58999999998765
No 78
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.84 E-value=2e-20 Score=143.29 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=92.8
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCC
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (408)
+..++.++| +.+.++++++|+||++||++|+.+.|.++++++.+. ++.++.||++++++++++|+|.++||+++|++|
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 82 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFIRDG 82 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESS
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEEECC
Confidence 345778889 677788999999999999999999999999999886 799999999999999999999999999999999
Q ss_pred eEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 138 VRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
+.+.++.|..+.++|.+++.+..++
T Consensus 83 ~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 83 KVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SEEEEEESCCCHHHHHHHHHTC---
T ss_pred EEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 9999999999999999999877643
No 79
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.83 E-value=8.5e-20 Score=138.23 Aligned_cols=100 Identities=24% Similarity=0.437 Sum_probs=91.2
Q ss_pred EEcCh-hhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 59 VSLNG-KNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 59 ~~l~~-~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
..++. ++|++.+. ++++++|.||++||++|+.+.|.+.++++.++ ++.++.||++++++++++|+|.++||+++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 34555 88988886 78999999999999999999999999999987 7999999999999999999999999999999
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+|+.+.++.| .+.+.+.+++++.+
T Consensus 81 ~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 81 DGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred CCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 9998899999 68999999998753
No 80
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.83 E-value=1.3e-20 Score=146.41 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=88.9
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC----cccHhHHHHcCCCcCcEE
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA----YLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~----~~~~~~~~~~~i~~~Pt~ 131 (408)
..+..++.++++..+.++++++|+|||+||++|+.+.|.++++++.++..+.++.++. ++.++++++|+|.++||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~ 91 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGF 91 (118)
T ss_dssp TTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEE
T ss_pred hhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeE
Confidence 4677889999999998899999999999999999999999999998875666553332 334678999999999999
Q ss_pred EEEeCCeEeEEeeCCCCHHHHHHHHH
Q 015368 132 YLFVAGVRQFQFFGERTRDVISAWVR 157 (408)
Q Consensus 132 ~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (408)
+++++|+.+.++.|..+.+.|.+||+
T Consensus 92 ~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 92 VHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEECCEEEEEecCCCCHHHHHHHhh
Confidence 99999999999999999999999985
No 81
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.83 E-value=8.6e-20 Score=148.51 Aligned_cols=105 Identities=19% Similarity=0.303 Sum_probs=95.8
Q ss_pred CCcEEcC-hhhHHHHHcC--CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 56 KDVVSLN-GKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 56 ~~~~~l~-~~~~~~~~~~--~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
..+..++ .++|+..+.+ +++++|+||++||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++||++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 90 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSVPTFL 90 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 4677776 6899988866 8999999999999999999999999999985 7999999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
+|++|+.+.++.|. +.++|.++|.+.+..
T Consensus 91 ~~~~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 91 FFKNSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred EEECCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 99999888899995 788899999999854
No 82
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.83 E-value=9.5e-20 Score=142.78 Aligned_cols=103 Identities=20% Similarity=0.327 Sum_probs=94.4
Q ss_pred CCcEEcChhhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc-ccHhHHHHcCCCcCcEEE
Q 015368 56 KDVVSLNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~-~~~~~~~~~~i~~~Pt~~ 132 (408)
..+..++.++|+..+. ++++++|.||++||++|+.+.|.+++++++++ ++.++.||++ ++++++++|+|.++||++
T Consensus 18 ~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~ 96 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPTFK 96 (124)
T ss_dssp TSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSSSSEEE
T ss_pred CceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCcchHHHHHHcCCCeeeEEE
Confidence 5788999999998775 68999999999999999999999999999987 6999999998 689999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++++|+.+.++.|.. .+++.+++++..
T Consensus 97 ~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 97 ILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 999999889999986 899999998754
No 83
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.83 E-value=7e-21 Score=148.59 Aligned_cols=107 Identities=25% Similarity=0.505 Sum_probs=95.0
Q ss_pred cCCCcEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-----CcEEEEEeCcccHhHHHHcCCCc
Q 015368 54 YAKDVVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-----EADLVMVDAYLEKDLAKEYNILA 127 (408)
Q Consensus 54 ~~~~~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-----~v~~~~v~~~~~~~~~~~~~i~~ 127 (408)
....+..+++++|+..+ .++++++|+|||+||++|+.+.|.|+++++.+++ ++.++.||+++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 45678999999999875 6789999999999999999999999999999986 7999999999876 665 9999
Q ss_pred CcEEEEEeCCeE--eEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 128 YPTLYLFVAGVR--QFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 128 ~Pt~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
+||+++|++|.. +.++.|..+.+.|.+||.+.+...
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 999999996644 788999999999999999887543
No 84
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.83 E-value=9.8e-21 Score=151.08 Aligned_cols=111 Identities=9% Similarity=0.131 Sum_probs=83.2
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCC--ChhHHhhhHHHHHHHHHhcCCcE--EEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANW--CYWSKKLAPEFAAAAKMLKGEAD--LVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~w--C~~C~~~~p~~~~~~~~~~~~v~--~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
.+..++.++|++.+.+++.++|.||++| |++|+.+.|.++++++++ +++. |+.||++++++++++|+|+++||++
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~ 96 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPATL 96 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEEE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeEE
Confidence 5678899999999887788999999988 999999999999999999 7788 9999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHhCCCccccc
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKMTLGTYSIT 168 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~ 168 (408)
+|++|+.+.++.|..+.++|.++|++.+..+...+.
T Consensus 97 ~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~~~~~ 132 (142)
T 2es7_A 97 VFTDGKLRGALSGIHPWAELLTLMRSIVDTPAAQET 132 (142)
T ss_dssp EESCC----CEESCCCHHHHHHHHHHHHC-------
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHhcccccCCC
Confidence 999999999999999999999999999977766554
No 85
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=4.6e-21 Score=153.07 Aligned_cols=104 Identities=21% Similarity=0.322 Sum_probs=94.3
Q ss_pred CCcEEcChhhHHHHHcCC--CcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccHhHHHHcCCC------
Q 015368 56 KDVVSLNGKNFSEFMGKN--RNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEYNIL------ 126 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~--~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~i~------ 126 (408)
..+..++.++|+..+.++ ++++|+|||+||++|+.+.|.|+++++++++ ++.|+.||++++++++++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 468899999999888544 4999999999999999999999999999986 8999999999999999999999
Q ss_pred cCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhH
Q 015368 127 AYPTLYLFVAGVRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 127 ~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
++||+++|++|+.+.++.|..+.+.+.+|+.+.
T Consensus 87 ~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 87 QLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp CSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred CCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 999999999999999999999888877776544
No 86
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.82 E-value=1e-19 Score=141.92 Aligned_cols=104 Identities=23% Similarity=0.419 Sum_probs=94.9
Q ss_pred CCcEEcCh-hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCC-cEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 56 KDVVSLNG-KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGE-ADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 56 ~~~~~l~~-~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
..+..++. ++|++.+.++++++|.||++||++|+.+.|.++++++.+++. +.++.||++++++++++|+|.++||+++
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEE
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEE
Confidence 45556654 899999988999999999999999999999999999988764 9999999999999999999999999999
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+++|+.+.++.|. +.+.|.++|++.+
T Consensus 95 ~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 95 FKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9999989999999 9999999998765
No 87
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.82 E-value=7.4e-20 Score=146.57 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=86.3
Q ss_pred ChhhHHHHHc--CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeE
Q 015368 62 NGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVR 139 (408)
Q Consensus 62 ~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~ 139 (408)
+.++|+..+. ++++++|+|||+||++|+.+.|.++++++++++++.|+.||++++++++++|+|.++||+++|++|+.
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcE
Confidence 5788886663 58999999999999999999999999999998789999999999999999999999999999999977
Q ss_pred eE---------EeeCCCC-HHHHHHHHHhHh
Q 015368 140 QF---------QFFGERT-RDVISAWVREKM 160 (408)
Q Consensus 140 ~~---------~~~g~~~-~~~l~~~i~~~~ 160 (408)
+. +..|..+ .+++.++|++.+
T Consensus 90 v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 90 IMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp EEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred EEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 65 3455554 788888887665
No 88
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.82 E-value=1.5e-19 Score=138.95 Aligned_cols=100 Identities=13% Similarity=0.205 Sum_probs=87.2
Q ss_pred CCcEEcChhhHHHHHc-CCC--cEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 56 KDVVSLNGKNFSEFMG-KNR--NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~-~~~--~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
..+.+++.++|.+.+. .++ +++|+|||+||++|+.+.|.++++++++. ++.|++||+++. +++|+|+++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCCCEEE
Confidence 3577889999998774 333 89999999999999999999999999987 699999999986 5899999999999
Q ss_pred EEeCCeEeEEeeCCC-------CHHHHHHHHHhH
Q 015368 133 LFVAGVRQFQFFGER-------TRDVISAWVREK 159 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~-------~~~~l~~~i~~~ 159 (408)
+|++|+.+.++.|.. +.+++..+|.+.
T Consensus 79 ~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 79 VYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999999999864 678888887654
No 89
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.82 E-value=2.4e-19 Score=139.07 Aligned_cols=105 Identities=19% Similarity=0.278 Sum_probs=91.3
Q ss_pred CcEEc--ChhhHHH-HHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEE
Q 015368 57 DVVSL--NGKNFSE-FMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYL 133 (408)
Q Consensus 57 ~~~~l--~~~~~~~-~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 133 (408)
.+..+ +..+|++ +..++++++|+||++||++|+.+.|.++++++.+ +++.|+.||++++++++++|+|.++||+++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALFF 82 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 46666 5788884 4467899999999999999999999999999999 689999999999999999999999999999
Q ss_pred EeC----CeEeEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 134 FVA----GVRQFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 134 ~~~----g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
|++ |+.+.++.|..+. +|.+.+.++..++
T Consensus 83 ~~~~~~~G~~~~~~~G~~~~-~l~~~~~~~~~~~ 115 (118)
T 2f51_A 83 VKKEGNEIKTLDQFVGADVS-RIKADIEKFKHHH 115 (118)
T ss_dssp EEEETTEEEEEEEEESCCHH-HHHHHHHHHC---
T ss_pred EeCCCCcceEEEeecCCCHH-HHHHHHHHhhhcc
Confidence 998 9888999998654 5999998887543
No 90
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.81 E-value=4.3e-19 Score=137.68 Aligned_cols=105 Identities=29% Similarity=0.409 Sum_probs=94.4
Q ss_pred CCcEEc-ChhhHHHHHcC----CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcE
Q 015368 56 KDVVSL-NGKNFSEFMGK----NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (408)
Q Consensus 56 ~~~~~l-~~~~~~~~~~~----~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (408)
..+..+ +.++|+..+.. +++++|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|++.++||
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt 84 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMPT 84 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBSE
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCcE
Confidence 356677 57889887744 8999999999999999999999999999987 79999999999999999999999999
Q ss_pred EEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
++++++|+.+.++.| .+.+.+.++|.+.+..
T Consensus 85 ~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 999999998889999 5899999999988754
No 91
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.81 E-value=4.2e-19 Score=142.02 Aligned_cols=106 Identities=16% Similarity=0.328 Sum_probs=95.2
Q ss_pred CCCcEEc-ChhhHHHHH----cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCc
Q 015368 55 AKDVVSL-NGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (408)
Q Consensus 55 ~~~~~~l-~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (408)
...+..+ +.++|++.+ .++++++|+||++||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|.++|
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 101 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKATP 101 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEES
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCccc
Confidence 3456666 478998776 358999999999999999999999999999985 7999999999999999999999999
Q ss_pred EEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 130 TLYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 130 t~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
|++++++|+.+.++.|. +.+++.++|.+.+..
T Consensus 102 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 102 TFFFLRDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp EEEEEETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred EEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 99999999999999998 899999999988754
No 92
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=1.3e-20 Score=149.66 Aligned_cols=110 Identities=25% Similarity=0.508 Sum_probs=96.9
Q ss_pred CCCcEEcChhhHHHHHc-CCCcEEEEEecCCChhHHhhhHHHHHHHHHhc--CCcEEEEEeCcccHhHHHHcCCCcCcEE
Q 015368 55 AKDVVSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~--~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (408)
...+..+++++|+..+. ++++++|+|||+||++|+.+.|.|+++++.++ +++.++.||++++..++++|+|.++||+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEE
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEE
Confidence 45789999999997774 58999999999999999999999999999997 4799999999999999999999999999
Q ss_pred EEEeCCeEe--EEee-CCCCHHHHHHHHHhHhCCCc
Q 015368 132 YLFVAGVRQ--FQFF-GERTRDVISAWVREKMTLGT 164 (408)
Q Consensus 132 ~~~~~g~~~--~~~~-g~~~~~~l~~~i~~~~~~~~ 164 (408)
++|++|..+ .+|. |..+.+.|.+||.+.+....
T Consensus 86 ~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 86 YFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 999976433 3677 56899999999999986553
No 93
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.81 E-value=2.7e-19 Score=137.70 Aligned_cols=103 Identities=26% Similarity=0.395 Sum_probs=93.2
Q ss_pred CCcEEc-ChhhHHHHHc----CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcE
Q 015368 56 KDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (408)
Q Consensus 56 ~~~~~l-~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (408)
..+..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|++.++||
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMPT 82 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTTE
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCcccE
Confidence 356667 6789988774 48999999999999999999999999999987 79999999999999999999999999
Q ss_pred EEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 131 LYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++++++|+.+.++.| .+.+.+.++|++.+
T Consensus 83 ~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999999998889999 68899999998765
No 94
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.81 E-value=1.4e-18 Score=152.23 Aligned_cols=189 Identities=12% Similarity=0.100 Sum_probs=144.8
Q ss_pred hhHHHHHc-CCCcEEEEEecCC--ChhHHhhhHHHHHHHHHh---cCC--cEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 64 KNFSEFMG-KNRNVMVMFYANW--CYWSKKLAPEFAAAAKML---KGE--ADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 64 ~~~~~~~~-~~~~~~v~f~a~w--C~~C~~~~p~~~~~~~~~---~~~--v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
++++..+. -.++++|.||++| |++|+.+.|.++++++.+ +++ +.|+.+|+++++++|++|||+++||+.++
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 45556663 3479999999999 999999999999999985 333 99999999999999999999999999999
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHhC--CCcccccChhHHHHHhcc-CCeEEEEEecCCCCcCHHH---HHHHh-ccC--
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKMT--LGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEE---LAAAS-KLH-- 206 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~--~~~~~i~~~~~~~~~~~~-~~~~vi~f~~~~~~~~~~~---~~~~a-~~~-- 206 (408)
+| ..+|.|..+.+.+..|+...+. .....+ +.+..+.+.+. .+..++.|+++||.++... +..++ .+.
T Consensus 94 ~g--~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~ 170 (243)
T 2hls_A 94 GG--EVRWTGIPAGEEIRALVEVIMRLSEDESGL-EDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ 170 (243)
T ss_dssp TT--TEEEESCCCTTHHHHHHHHHHHHHTTCCCC-CHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT
T ss_pred CC--ceeEcCCCcHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc
Confidence 67 7889999888889999887652 222223 44555554433 4566778999999986544 44455 331
Q ss_pred --CceeEEEe---cCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCC
Q 015368 207 --SDVNFYQT---TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (408)
Q Consensus 207 --~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (408)
.++.+..+ .+.+++++|++. ++|++++ + + . ..|.|..+.++|.+||....
T Consensus 171 ~~~~v~~~~vd~~~~~~~~~~~~V~---~vPt~~i--~-G-~-~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 171 GNPVILSEAVEAYENPDIADKYGVM---SVPSIAI--N-G-Y-LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp TCCCEEEEEEETTTCHHHHHHTTCC---SSSEEEE--T-T-E-EEEESCCCHHHHHHHHHHHH
T ss_pred cCCcEEEEEEECccCHHHHHHcCCe---eeCeEEE--C-C-E-EEEeCCCCHHHHHHHHHHHh
Confidence 56777665 567889999998 6999987 2 2 3 35999999999999998654
No 95
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.80 E-value=2.6e-19 Score=141.94 Aligned_cols=104 Identities=18% Similarity=0.281 Sum_probs=92.4
Q ss_pred CCCcEEcCh-hhHHHHHcC--CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEE
Q 015368 55 AKDVVSLNG-KNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 55 ~~~~~~l~~-~~~~~~~~~--~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (408)
...+..++. ++|+..+.. +++++|+|||+||++|+.+.|.++++++.+ ++.++.||++++++++++|+|.++||+
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 96 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALPTF 96 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCCEE
Confidence 456778875 888888854 579999999999999999999999998887 599999999999999999999999999
Q ss_pred EEEe--CCe--EeEEeeCCCCHHHHHHHHHhHhC
Q 015368 132 YLFV--AGV--RQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 132 ~~~~--~g~--~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++|+ +|+ .+.++.|. +.++|.++|.+.+.
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9996 887 78889998 89999999998764
No 96
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.80 E-value=6.6e-19 Score=154.72 Aligned_cols=108 Identities=36% Similarity=0.550 Sum_probs=100.0
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC---CcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG---EADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
..+..++.++|+..+.++++++|+|||+||++|+.+.|.+.++++.+++ ++.++.||++++++++++|+|.++||++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 209 (241)
T 3idv_A 130 EVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLK 209 (241)
T ss_dssp CSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 4678899999999998889999999999999999999999999999976 4999999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHhCCCc
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKMTLGT 164 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (408)
+|++|+.+. |.|.++.++|.+||.+.+++.+
T Consensus 210 ~~~~g~~~~-~~g~~~~~~l~~~l~~~~~~~~ 240 (241)
T 3idv_A 210 IFRKGRPYD-YNGPREKYGIVDYMIEQSGAAA 240 (241)
T ss_dssp EEETTEEEE-CCSCCSHHHHHHHHHHHTTCTT
T ss_pred EEECCeEEE-ecCCCCHHHHHHHHHhhhCCCC
Confidence 999996654 9999999999999999987654
No 97
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.80 E-value=9.2e-17 Score=155.63 Aligned_cols=307 Identities=16% Similarity=0.234 Sum_probs=226.7
Q ss_pred CCcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 56 KDVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 56 ~~~~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
..+..+ +.++++..+..++.++|.|+.++|..| .+.|.++++.+++++.|+.++ +.+++++|++...| +++|
T Consensus 110 ~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~~~~F~~~~---~~~~~~~~~v~~~~-i~~~ 182 (481)
T 3f8u_A 110 PASVPLRTEEEFKKFISDKDASIVGFFDDSFSEA---HSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNGEG-IILF 182 (481)
T ss_dssp CSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHH---HHHHHHHHHHHTTTSCEEEEC---CHHHHHHHCSSSEE-EEEE
T ss_pred cCceecCCHHHHHHHHhcCCcEEEEEECCCccch---HHHHHHHHHHhccCceEEEEC---CHHHHHHhCCCCCc-EEEE
Confidence 345566 667888888888999999999987765 568999999998899999775 67899999999866 7777
Q ss_pred e------C-CeEeEEee-CCCCHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEEEEecCCCCcC-------HHHH
Q 015368 135 V------A-GVRQFQFF-GERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGME-------SEEL 199 (408)
Q Consensus 135 ~------~-g~~~~~~~-g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~-------~~~~ 199 (408)
+ + +.....|. |..+.+.|.+||..+..+.+.+++. +.+..+.. ...+++|+....... ...+
T Consensus 183 ~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~-~n~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~ 259 (481)
T 3f8u_A 183 RPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLIQG--KDLLIAYYDVDYEKNAKGSNYWRNRV 259 (481)
T ss_dssp CCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECT-TTHHHHTT--SSEEEEEECCCTTTCHHHHHHHHHHH
T ss_pred ecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccCh-hHHHHhcC--CCceEEEEecccccchhhHHHHHHHH
Confidence 6 1 22456788 8899999999999999999988854 55555543 334455554322221 2335
Q ss_pred HHHh-ccCCc---eeEEEecC---HhHHhhcCCCCC-CCCCeEEEeecCCCcccccCCcCCHH--HHHHHHhcCC-----
Q 015368 200 AAAS-KLHSD---VNFYQTTS---ADVAEFFHIHPK-SKRPALIFLHLEAGKATPFRHQFTRL--AIANFVTHTK----- 264 (408)
Q Consensus 200 ~~~a-~~~~~---~~f~~~~~---~~l~~~~~i~~~-~~~p~l~~~~~~~~~~~~y~g~~~~~--~i~~fi~~~~----- 264 (408)
..+| ++.++ +.|+.+.. ....+.||++.. ...|.++++.. ++..+.+++.++.+ .|.+|+....
T Consensus 260 ~~vA~~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~~~~~~P~~~i~~~-~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~ 338 (481)
T 3f8u_A 260 MMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDGNLK 338 (481)
T ss_dssp HHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCTTCSCEEEEECS-SSCEEECCSCCCTTSHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcCCCceEEEEEEcHHHHHHHHHHcCCCcccCCCcEEEEEcC-CCcccCCCcccCccHHHHHHHHHHHhcCCcc
Confidence 5666 55555 88887643 346678898731 24799998873 34566777888888 9999987411
Q ss_pred ------------CCceEeeccccccccccC-CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCccc
Q 015368 265 ------------HPLVVTLTIHNAQFVFQD-PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGV 329 (408)
Q Consensus 265 ------------~p~v~~lt~~~~~~~~~~-~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~ 329 (408)
...+..++..++..+... +.++++ ++.+||. |+...+.+.++++++.++ +++.|+.+|++..
T Consensus 339 ~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~~v~~~~id~~~~-- 415 (481)
T 3f8u_A 339 RYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD-PNIVIAKMDATAN-- 415 (481)
T ss_dssp CCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTSS--
T ss_pred cccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccC-CCEEEEEEECCch--
Confidence 124677888888876655 445444 5667887 999999999999999873 2399999998763
Q ss_pred ccchhhhccCCCCCCcEEEEEccCCc--cccCCCCCChHHHHHHHHHHhcCcc
Q 015368 330 GRRVSQEFGVSGNAPRVIAYSARDAK--KYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 330 ~~~l~~~~~i~~~~~p~i~i~~~~~~--~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
.+.+.|++. ..|.+++++.+++ ...+.|..+.+.+.+||++......
T Consensus 416 --~~~~~~~v~--~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~ 464 (481)
T 3f8u_A 416 --DVPSPYEVR--GFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPP 464 (481)
T ss_dssp --CCCTTCCCC--SSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCC
T ss_pred --hhHhhCCCc--ccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCcc
Confidence 566788885 3689888887554 5678999999999999999887766
No 98
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=7.7e-19 Score=139.51 Aligned_cols=102 Identities=13% Similarity=0.175 Sum_probs=90.8
Q ss_pred CCCcEEcChhhHHHHHcC---CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEE
Q 015368 55 AKDVVSLNGKNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~---~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~ 131 (408)
...+..++.++|...+.+ +++++|+|||+||++|+.+.|.|+++++++. ++.|+.||+++.. ++|+|.++||+
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt~ 84 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPTI 84 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCEE
Confidence 357888999999987743 3699999999999999999999999999986 6999999999875 78999999999
Q ss_pred EEEeCCeEeEEeeCCC-------CHHHHHHHHHhHh
Q 015368 132 YLFVAGVRQFQFFGER-------TRDVISAWVREKM 160 (408)
Q Consensus 132 ~~~~~g~~~~~~~g~~-------~~~~l~~~i~~~~ 160 (408)
++|++|+.+.++.|.. +.++|.++|.+..
T Consensus 85 ~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 85 FVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 9999999899999975 7899999998774
No 99
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=9.1e-19 Score=138.36 Aligned_cols=105 Identities=19% Similarity=0.327 Sum_probs=91.5
Q ss_pred EEcChhhHHHHH----cCCCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeCc--ccHhHHHHcCCCcCc
Q 015368 59 VSLNGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYP 129 (408)
Q Consensus 59 ~~l~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~i~~~P 129 (408)
..++..+|++.+ .++++++|+||++||++|+.+.|.+ +.+.+.++.++.++.||++ .+..++++|+|.++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~P 88 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYP 88 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSC
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCC
Confidence 345666777655 4689999999999999999999999 7777777668999999998 578999999999999
Q ss_pred EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 130 TLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 130 t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
++++++ +|+++.++.|..+.+.|.++|++.+.+.
T Consensus 89 t~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 89 TLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp EEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 999995 9988899999999999999999988654
No 100
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.77 E-value=3e-18 Score=148.96 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=93.9
Q ss_pred cEEcChhhHHHHHcCCCcE-EEEEecCCChhHHhhhHHHHHHHHHhc----CCcEEEEEeCcccHhHHHHcCCCcCcEEE
Q 015368 58 VVSLNGKNFSEFMGKNRNV-MVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYPTLY 132 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~-~v~f~a~wC~~C~~~~p~~~~~~~~~~----~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~ 132 (408)
...+++++++.+...++++ +|+|||+||++|+++.|.++++++.++ +++.++.||++++++++++|+|.++||++
T Consensus 118 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 197 (226)
T 1a8l_A 118 ETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIV 197 (226)
T ss_dssp CCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEE
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEE
Confidence 4467788888776666677 999999999999999999999999997 58999999999999999999999999999
Q ss_pred EEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 133 LFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 133 ~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++++|+...++.|..+.+.|.+||.+.+
T Consensus 198 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 198 IQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 9999988899999999999999998765
No 101
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.77 E-value=1.9e-18 Score=137.06 Aligned_cols=93 Identities=15% Similarity=0.276 Sum_probs=84.8
Q ss_pred HHHcCCCcEEEEEecCCChhHHhhhHHHH--HHHHHhcCCcEEEEEeC---cccHhHHHHcCC---CcCcEEEEEe-CCe
Q 015368 68 EFMGKNRNVMVMFYANWCYWSKKLAPEFA--AAAKMLKGEADLVMVDA---YLEKDLAKEYNI---LAYPTLYLFV-AGV 138 (408)
Q Consensus 68 ~~~~~~~~~~v~f~a~wC~~C~~~~p~~~--~~~~~~~~~v~~~~v~~---~~~~~~~~~~~i---~~~Pt~~~~~-~g~ 138 (408)
....++++++|+|||+||++|+.+.|.+. ++++.+++++.++.||+ +++++++++|+| .++||+++++ +|+
T Consensus 24 ~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~ 103 (133)
T 3fk8_A 24 AGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGK 103 (133)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSC
T ss_pred HHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCC
Confidence 34467899999999999999999999999 99999877899999999 999999999999 9999999995 999
Q ss_pred EeEEeeC-------CCCHHHHHHHHHhHh
Q 015368 139 RQFQFFG-------ERTRDVISAWVREKM 160 (408)
Q Consensus 139 ~~~~~~g-------~~~~~~l~~~i~~~~ 160 (408)
.+.++.| ..+.+++.+|+++..
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 104 VRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 9999999 789999999998653
No 102
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.63 E-value=3e-20 Score=141.20 Aligned_cols=102 Identities=25% Similarity=0.480 Sum_probs=93.4
Q ss_pred cEEcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeC
Q 015368 58 VVSLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVA 136 (408)
Q Consensus 58 ~~~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~ 136 (408)
+..++.++|...+ .++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|++.++|+++++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKN 82 (106)
Confidence 5578888888544 678999999999999999999999999999998789999999999999999999999999999999
Q ss_pred CeEeEEeeCCCCHHHHHHHHHhH
Q 015368 137 GVRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 137 g~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
|+.+.++.|..+.+.+.+++++.
T Consensus 83 g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 83 GQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 98888999999999999998764
No 103
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.76 E-value=9.8e-18 Score=145.47 Aligned_cols=119 Identities=20% Similarity=0.252 Sum_probs=102.0
Q ss_pred CCCcEEcChhhHHHHHcCCCcEEEEEe--cCCChhHHhhhHHHHHHHHHhc---CCcEEEEEeCcc-----cHhHHHHcC
Q 015368 55 AKDVVSLNGKNFSEFMGKNRNVMVMFY--ANWCYWSKKLAPEFAAAAKMLK---GEADLVMVDAYL-----EKDLAKEYN 124 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~v~f~--a~wC~~C~~~~p~~~~~~~~~~---~~v~~~~v~~~~-----~~~~~~~~~ 124 (408)
...+..|++.+|+..+.++++++|.|| ||||+ +.|.|+++++.+. +++.|+.|||++ ++++|++|+
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 457889999999998888899999999 99998 9999999999984 389999999999 899999999
Q ss_pred CC--cCcEEEEEeCCeE--eEEe--eCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhc
Q 015368 125 IL--AYPTLYLFVAGVR--QFQF--FGERTRDVISAWVREKMTLGTYSITTTDEAERILT 178 (408)
Q Consensus 125 i~--~~Pt~~~~~~g~~--~~~~--~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~ 178 (408)
|+ ++||+++|. |+. +.+| .|.++.+.|.+||.+.++.....-...++++.++.
T Consensus 91 V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~~~~~g~i~~~d~l~~ 149 (248)
T 2c0g_A 91 VDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCIKEFNEVLK 149 (248)
T ss_dssp CCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCCCCCTTCCHHHHHHHT
T ss_pred CCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccccCCCCchHHHHHHHH
Confidence 99 999999999 962 6788 89999999999999998644333334455665554
No 104
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.75 E-value=2.8e-18 Score=136.23 Aligned_cols=100 Identities=23% Similarity=0.390 Sum_probs=86.6
Q ss_pred cChhhHHHHHc--CCCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeC----cccHhHHHHcCCCcCcEE
Q 015368 61 LNGKNFSEFMG--KNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA----YLEKDLAKEYNILAYPTL 131 (408)
Q Consensus 61 l~~~~~~~~~~--~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~----~~~~~~~~~~~i~~~Pt~ 131 (408)
.+.++++..+. ++++++|+|||+||++|+.+.|.+ .++++.++ ++.++.||+ +.+.+++++|+|.++||+
T Consensus 17 ~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~ 95 (134)
T 2fwh_A 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTI 95 (134)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEE
T ss_pred cCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEE
Confidence 35567776663 489999999999999999999999 99999987 599999999 667899999999999999
Q ss_pred EEEe-CCeEe--EEeeCCCCHHHHHHHHHhHhC
Q 015368 132 YLFV-AGVRQ--FQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 132 ~~~~-~g~~~--~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++++ +|+++ .++.|..+.++|.+++++..+
T Consensus 96 ~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 96 LFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp EEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred EEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 9995 99776 689999999999999987653
No 105
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.74 E-value=1.2e-17 Score=124.29 Aligned_cols=98 Identities=19% Similarity=0.240 Sum_probs=84.8
Q ss_pred CcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHh----HHHHcCCCc-CcE
Q 015368 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILA-YPT 130 (408)
Q Consensus 57 ~~~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~i~~-~Pt 130 (408)
....+ +.++|++++.++++++|.|+|+||++|+.+.|.++++++. .++.++.||++++++ ++.+|||++ .|+
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq 84 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQ 84 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSE
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCe
Confidence 34445 5678999998899999999999999999999999999985 489999999999977 799999995 999
Q ss_pred EEEEeCCeEeEE-eeCCCCHHHHHHHH
Q 015368 131 LYLFVAGVRQFQ-FFGERTRDVISAWV 156 (408)
Q Consensus 131 ~~~~~~g~~~~~-~~g~~~~~~l~~~i 156 (408)
+++|++|+.+.+ -.|..+.+.|.+.+
T Consensus 85 ~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 85 AFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEEECCEEEEEeeccccCHHHHHHhh
Confidence 999999987766 45788998887654
No 106
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.73 E-value=1.1e-17 Score=132.47 Aligned_cols=123 Identities=15% Similarity=0.230 Sum_probs=107.9
Q ss_pred cCCCCceEeeccccccccccCCccEEEEEeeCC-CchHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCC
Q 015368 262 HTKHPLVVTLTIHNAQFVFQDPRKQLWLFAPAY-GSDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVS 340 (408)
Q Consensus 262 ~~~~p~v~~lt~~~~~~~~~~~~~~~i~f~~~~-~~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~ 340 (408)
..+.|++.++|.+++..++..+.|+++.|...+ .++.+...++++|++|+++ +.|+++|.+.+ +++++.||+.
T Consensus 2 ~c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk---~~f~~vd~d~~---~~~a~~~gi~ 75 (133)
T 2djk_A 2 PLGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGV---INFGTIDAKAF---GAHAGNLNLK 75 (133)
T ss_dssp CCSCCCSEECCHHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTT---SEEEEECTTTT---GGGTTTTTCC
T ss_pred CcccCceeccChHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCe---EEEEEEchHHh---HHHHHHcCCC
Confidence 357899999999999998877778887776544 4889999999999999999 99999998763 4788999998
Q ss_pred CCCCcEEEEEcc-CCccccCC--CCCChHHHHHHHHHHhcCcc--ccccccCchh
Q 015368 341 GNAPRVIAYSAR-DAKKYVLN--GELTLSSIKSFGEEFLEDKL--LNQSDQISET 390 (408)
Q Consensus 341 ~~~~p~i~i~~~-~~~~y~~~--~~~~~~~i~~Fi~~~~~gk~--~~kse~iP~~ 390 (408)
....|.+++++. ++++|.+. |.++.++|.+|++++++|++ ++||||||++
T Consensus 76 ~~~iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~ 130 (133)
T 2djk_A 76 TDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEK 130 (133)
T ss_dssp SSSSSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTT
T ss_pred cccCCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCc
Confidence 767899999985 67788886 89999999999999999999 9999999987
No 107
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.73 E-value=1.5e-17 Score=144.19 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=91.7
Q ss_pred cCCCcEEc-ChhhHHHHHc---CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCc
Q 015368 54 YAKDVVSL-NGKNFSEFMG---KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYP 129 (408)
Q Consensus 54 ~~~~~~~l-~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~P 129 (408)
....+..+ +.++|...+. ++++|+|+|||+||++|+.+.|.|.++++.+. ++.|+.||+++ .+++++|+|.++|
T Consensus 110 ~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~-~~l~~~~~I~~~P 187 (245)
T 1a0r_P 110 RYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIKASN-TGAGDRFSSDVLP 187 (245)
T ss_dssp CCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH-HCCTTSSCTTTCS
T ss_pred CCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc-HHHHHHCCCCCCC
Confidence 34578888 7899998884 37899999999999999999999999999997 59999999987 7799999999999
Q ss_pred EEEEEeCCeEeEEeeCC-------CCHHHHHHHHHhHh
Q 015368 130 TLYLFVAGVRQFQFFGE-------RTRDVISAWVREKM 160 (408)
Q Consensus 130 t~~~~~~g~~~~~~~g~-------~~~~~l~~~i~~~~ 160 (408)
|+++|++|+.+.++.|. .+.+.|..||.++.
T Consensus 188 Tll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 188 TLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 99999999888888775 35678888888764
No 108
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.73 E-value=6e-18 Score=122.88 Aligned_cols=83 Identities=17% Similarity=0.353 Sum_probs=77.2
Q ss_pred CcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHH
Q 015368 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (408)
Q Consensus 74 ~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (408)
.+++|.||++||++|+++.|.++++++++++++.++.||++++++++++|++.++||+++ +|+. ++.|..+.+++.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~ 78 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALV 78 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHH
Confidence 478999999999999999999999999998889999999999999999999999999988 8965 889999999999
Q ss_pred HHHHhHh
Q 015368 154 AWVREKM 160 (408)
Q Consensus 154 ~~i~~~~ 160 (408)
+++++.+
T Consensus 79 ~~l~~~l 85 (85)
T 1fo5_A 79 EAIKKRL 85 (85)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998753
No 109
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.73 E-value=6.1e-18 Score=144.92 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=92.2
Q ss_pred CCCcEEc-ChhhHHHHHcC---CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcE
Q 015368 55 AKDVVSL-NGKNFSEFMGK---NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (408)
Q Consensus 55 ~~~~~~l-~~~~~~~~~~~---~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (408)
...+..+ +.++|...+.. +++++|.|||+||++|+.+.|.|.++++.+. ++.|+.||++ ++.++++|+|.++||
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 4568888 89999988743 3899999999999999999999999999986 8999999999 888999999999999
Q ss_pred EEEEeCCeEeEEeeCCCCH-------HHHHHHHHhH
Q 015368 131 LYLFVAGVRQFQFFGERTR-------DVISAWVREK 159 (408)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~-------~~l~~~i~~~ 159 (408)
+++|++|+.+.++.|..+. ++|..||.++
T Consensus 176 l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9999999988999997764 8899998765
No 110
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.73 E-value=5e-17 Score=140.63 Aligned_cols=101 Identities=23% Similarity=0.398 Sum_probs=92.7
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEec--CCChhHHhhhHHHHHHHHHhcC--CcEEEEEe-----CcccHhHHHHcCCC
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYA--NWCYWSKKLAPEFAAAAKMLKG--EADLVMVD-----AYLEKDLAKEYNIL 126 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a--~wC~~C~~~~p~~~~~~~~~~~--~v~~~~v~-----~~~~~~~~~~~~i~ 126 (408)
..+..|++.+|+..+.++++++|.||| |||+ +.|.|+++++.+++ ++.|+.|| |++++++|++|+|+
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 468899999999988888999999999 9999 99999999999964 79999999 45589999999999
Q ss_pred --cCcEEEEEeCCe--EeEEeeCCCCHHHHHHHHHhHh
Q 015368 127 --AYPTLYLFVAGV--RQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 127 --~~Pt~~~~~~g~--~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++||+++|++|+ .+.+|.|.++.+.|.+||.+..
T Consensus 81 ~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999999999996 4789999999999999999885
No 111
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.73 E-value=5.5e-18 Score=140.71 Aligned_cols=101 Identities=13% Similarity=0.146 Sum_probs=83.2
Q ss_pred EcChhhHHHHH----cCCCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeCcccHhH-------------
Q 015368 60 SLNGKNFSEFM----GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLEKDL------------- 119 (408)
Q Consensus 60 ~l~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~~~~~~~------------- 119 (408)
..+..+|++.+ .++++++|+|||+||++|+.+.+.+ .++.+.+++++.++.||++++.++
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTER 109 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhh
Confidence 34455566544 6799999999999999999975444 556665555799999999877655
Q ss_pred -------------HHHcCCCcCcEEEEEe-CCeEeEEeeCCCC-HHHHHHHHHhHh
Q 015368 120 -------------AKEYNILAYPTLYLFV-AGVRQFQFFGERT-RDVISAWVREKM 160 (408)
Q Consensus 120 -------------~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~-~~~l~~~i~~~~ 160 (408)
+++|+|.++||+++++ +|+++.++.|..+ .+++.++|++.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 110 TLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 7999999999999996 9998899999998 999999998765
No 112
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.72 E-value=8.3e-18 Score=122.14 Aligned_cols=82 Identities=21% Similarity=0.390 Sum_probs=76.5
Q ss_pred cEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHH
Q 015368 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (408)
Q Consensus 75 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (408)
..+|.||++||++|+++.|.++++++++++++.++.||++++++++++|+|.++||+++ +|+. ++.|..+.+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~ 78 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFE 78 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHH
Confidence 46899999999999999999999999998889999999999999999999999999988 8865 8899999999999
Q ss_pred HHHhHh
Q 015368 155 WVREKM 160 (408)
Q Consensus 155 ~i~~~~ 160 (408)
++++.+
T Consensus 79 ~l~~~l 84 (85)
T 1nho_A 79 AINDEM 84 (85)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998765
No 113
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.72 E-value=7.9e-17 Score=129.97 Aligned_cols=103 Identities=17% Similarity=0.257 Sum_probs=91.7
Q ss_pred EEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc------------------------
Q 015368 59 VSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------ 114 (408)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~------------------------ 114 (408)
..++++.++....++++++|.||++||++|+.+.|.+.++++++++++.++.|+++
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPI 94 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCE
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcce
Confidence 56778777766667899999999999999999999999999999877999999964
Q ss_pred ---ccHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 115 ---LEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 115 ---~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
.+.++++.|+|.++|++++++ +|+++.++.|..+.+++.++|++.+.
T Consensus 95 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 95 FVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp EECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred EECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 456899999999999999996 99888999999999999999998764
No 114
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.72 E-value=1.1e-18 Score=137.92 Aligned_cols=105 Identities=27% Similarity=0.400 Sum_probs=93.7
Q ss_pred CCcEEc-ChhhHHHHHc----CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcE
Q 015368 56 KDVVSL-NGKNFSEFMG----KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPT 130 (408)
Q Consensus 56 ~~~~~l-~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt 130 (408)
..+..+ +.++|+..+. ++++++|.||++||++|+.+.|.++++++.++ ++.++.||++++++++++|+|.++||
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 92 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEAMPT 92 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCSSCC
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCccce
Confidence 456667 4688887774 48999999999999999999999999999987 79999999999999999999999999
Q ss_pred EEEEeCCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 131 LYLFVAGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 131 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
++++++|+.+.++.| .+.+.+.++|.+.+..
T Consensus 93 ~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 93 FLFIKDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp CCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred EEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 999999988888889 5888999999988754
No 115
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.71 E-value=3.3e-17 Score=130.23 Aligned_cols=101 Identities=17% Similarity=0.308 Sum_probs=86.3
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc----------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL---------------------- 115 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~---------------------- 115 (408)
+.+++++.++....++++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++.
T Consensus 9 l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 87 (136)
T 1lu4_A 9 ATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDA 87 (136)
T ss_dssp EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECT
T ss_pred eecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECC
Confidence 3344444444333468999999999999999999999999999998 89999999987
Q ss_pred cHhHHHHcCCCcCcEEEEEe-CCeEeEEee---CCCCHHHHHHHHHhHh
Q 015368 116 EKDLAKEYNILAYPTLYLFV-AGVRQFQFF---GERTRDVISAWVREKM 160 (408)
Q Consensus 116 ~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~---g~~~~~~l~~~i~~~~ 160 (408)
+.+++++|++.++|++++++ +|++. ++. |..+.+.+.++|++.+
T Consensus 88 ~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 88 DGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred chhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 67899999999999999997 89887 999 9999999999998754
No 116
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.71 E-value=2.2e-17 Score=128.90 Aligned_cols=101 Identities=14% Similarity=0.237 Sum_probs=87.0
Q ss_pred CcEEcChhhHHHHHcC--CCcEEEEEecC-------CChhHHhhhHHHHHHHHHhcCCcEEEEEeC-------cccHhHH
Q 015368 57 DVVSLNGKNFSEFMGK--NRNVMVMFYAN-------WCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------YLEKDLA 120 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~--~~~~~v~f~a~-------wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~-------~~~~~~~ 120 (408)
.+...+.++|+..+.+ +++++|+|||+ ||++|+.+.|.++++++.+++++.|+.||+ +.+.+++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 4556788999988855 89999999999 999999999999999999987999999999 7888999
Q ss_pred HHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHh
Q 015368 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (408)
Q Consensus 121 ~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (408)
++|+|.++||+++|++|.....+.| .+.+.+.++|.+
T Consensus 86 ~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 9999999999999998745444444 567888888864
No 117
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.71 E-value=5.8e-17 Score=131.75 Aligned_cols=97 Identities=15% Similarity=0.367 Sum_probs=83.2
Q ss_pred hhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeCccc-----------HhHHHHcCCCcC
Q 015368 64 KNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLE-----------KDLAKEYNILAY 128 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~~~~-----------~~~~~~~~i~~~ 128 (408)
+.+.....++++++|+|| |+||++|+.+.|.+ .++.+.++.++.++.||+++. .+++++|+|.++
T Consensus 38 ~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~ 117 (154)
T 2ju5_A 38 EALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF 117 (154)
T ss_dssp HHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC
Confidence 334444456899999999 99999999999999 788776655899999999765 489999999999
Q ss_pred cEEEEEe-CCeEeEEeeCCC--CHHHHHHHHHhHhC
Q 015368 129 PTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (408)
Q Consensus 129 Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (408)
||+++++ +|+++.++ |.. +.+.+.++|++.+.
T Consensus 118 Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 118 PELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp SEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 9999996 99888899 988 99999999988764
No 118
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.71 E-value=4.3e-17 Score=128.98 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=95.8
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCc--CcEEEEE
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILA--YPTLYLF 134 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~--~Pt~~~~ 134 (408)
.+.++|..+|+..+..+.+++|+|||+ |++|+.+.|.++++|+++++++.|+.||.++++++++.|||++ +||++++
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~ 85 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ 85 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEE
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEE
Confidence 477899999998888889999999999 8999999999999999999999999999999999999999999 9999999
Q ss_pred eC--CeEeEEee--CCCCHHHHHHHHHhHhCCCc
Q 015368 135 VA--GVRQFQFF--GERTRDVISAWVREKMTLGT 164 (408)
Q Consensus 135 ~~--g~~~~~~~--g~~~~~~l~~~i~~~~~~~~ 164 (408)
++ |+. .+.. |..+.+.|.+|+++.+...+
T Consensus 86 ~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 86 EVAKNQK-FPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp CTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred ecCcCcc-cCCCCccccCHHHHHHHHHHHHcCCc
Confidence 96 644 5665 99999999999998875443
No 119
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.70 E-value=7.3e-17 Score=128.16 Aligned_cols=102 Identities=18% Similarity=0.261 Sum_probs=87.4
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc---------------------
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------------------- 115 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~--------------------- 115 (408)
.+..++++.++.....+++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++.
T Consensus 9 ~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (136)
T 1zzo_A 9 SAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLA 87 (136)
T ss_dssp EEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEE
T ss_pred ccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEE
Confidence 34445555554333468999999999999999999999999999998 89999999854
Q ss_pred --cHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 116 --EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 116 --~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+..+++.|++.++|++++++ +|++. ++.|..+.+++.++|++.+
T Consensus 88 d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 88 DTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp CTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred cCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 56789999999999999997 89887 9999999999999998876
No 120
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.70 E-value=1.1e-17 Score=126.42 Aligned_cols=89 Identities=16% Similarity=0.163 Sum_probs=73.4
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhc--CCcEEEEEeCccc--HhHHHHcCCCcCcEEEEEeCCeEeEEeeCCC
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE--KDLAKEYNILAYPTLYLFVAGVRQFQFFGER 147 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~--~~v~~~~v~~~~~--~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~ 147 (408)
+...++|+|||+||++|+.+.+.+....+... ..+.+..||++++ .+++.+++|.++||+++|++|+++.+..|..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 45789999999999999999875543322210 0378899999886 5789999999999999999999999999999
Q ss_pred CHHHHHHHHHhHh
Q 015368 148 TRDVISAWVREKM 160 (408)
Q Consensus 148 ~~~~l~~~i~~~~ 160 (408)
..+.|..|+.+.+
T Consensus 97 ~~~~f~~~L~~~l 109 (116)
T 3dml_A 97 GEDFFWPMLARLI 109 (116)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998775
No 121
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.69 E-value=1.5e-16 Score=130.99 Aligned_cols=105 Identities=22% Similarity=0.338 Sum_probs=90.9
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccHhHHHHc------------
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKDLAKEY------------ 123 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~~~~~~~------------ 123 (408)
.+.+++++.++....++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+.+.+++|
T Consensus 18 ~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 97 (165)
T 3or5_A 18 SGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMM 97 (165)
T ss_dssp EEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEE
T ss_pred eeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEe
Confidence 344556665554444789999999999999999999999999999987 5999999999887777666
Q ss_pred ---------------CCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 124 ---------------NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 124 ---------------~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++.++|++++++ +|+++.++.|..+.+++.++|++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 98 ATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp CCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred cCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 899999999997 99888999999999999999998875
No 122
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.52 E-value=1.8e-18 Score=136.58 Aligned_cols=99 Identities=20% Similarity=0.331 Sum_probs=86.7
Q ss_pred hhhHHHHHcCCCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeCc--ccHhHHHHcCCCcCcEEEEE--e
Q 015368 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPTLYLF--V 135 (408)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~--~ 135 (408)
.+.+.....++++++|+|||+||++|+.+.|.+ .++++.+++++.++.||++ ++.+++++|+|.++||+++| +
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 344555556789999999999999999999999 9999988878999999994 66889999999999999999 4
Q ss_pred CCeE--eEEeeCCCCHHHHHHHHHhHhC
Q 015368 136 AGVR--QFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 136 ~g~~--~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+|+. +.++.|..+.+.|.++|++.+.
T Consensus 89 ~G~~~~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 89 AGAWEEVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 6877 7889999999999999988774
No 123
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.68 E-value=3.6e-16 Score=127.97 Aligned_cols=102 Identities=15% Similarity=0.234 Sum_probs=86.6
Q ss_pred cChhhHHHHHcCCCcEEEEEecCCChhHHhh-hHHHHHHHHHhcC-CcEEEEEeCc------------------------
Q 015368 61 LNGKNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EADLVMVDAY------------------------ 114 (408)
Q Consensus 61 l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~-~v~~~~v~~~------------------------ 114 (408)
++++.+...-.++++++|.||++||++|+.+ +|.+.++++++++ ++.++.|+++
T Consensus 18 ~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (160)
T 3lor_A 18 VNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFP 97 (160)
T ss_dssp SSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSC
T ss_pred cCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCc
Confidence 4555554333468999999999999999995 9999999999987 6999999862
Q ss_pred ----ccHh------HHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 115 ----LEKD------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 115 ----~~~~------~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
.... +++.|++.++|++++++ +|+++.++.|..+.+.+.++|++.+..
T Consensus 98 ~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 98 VAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp EEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 3334 89999999999999998 999999999999999999999988743
No 124
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.68 E-value=2.5e-17 Score=124.35 Aligned_cols=77 Identities=21% Similarity=0.287 Sum_probs=66.2
Q ss_pred cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc------ccHhHHHHcCCCcCcEEEEEeCCeEeEEee
Q 015368 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------LEKDLAKEYNILAYPTLYLFVAGVRQFQFF 144 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~------~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~ 144 (408)
..+++++|+|||+||++|+.+.|.|+++++.++ .|||+ +++++|++|+|+++||+++ +|+ .+.
T Consensus 10 ~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~---~~~ 78 (106)
T 3kp8_A 10 HLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYT 78 (106)
T ss_dssp HHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE---EEE
T ss_pred hcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE---Eec
Confidence 345778999999999999999999999997764 56666 6788999999999999777 885 389
Q ss_pred CCCCHHHHHHHHHh
Q 015368 145 GERTRDVISAWVRE 158 (408)
Q Consensus 145 g~~~~~~l~~~i~~ 158 (408)
|.++.++|.+|+.-
T Consensus 79 G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 79 GVRSLEALAVASGY 92 (106)
T ss_dssp SCCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHhCC
Confidence 99999999999753
No 125
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.68 E-value=8.7e-18 Score=157.78 Aligned_cols=97 Identities=28% Similarity=0.381 Sum_probs=83.5
Q ss_pred CCCcEEcChhhHHHHHcC--CCcEEEEEecCCChhHHhhhHHHHHHHHHhcC--------CcEEEEEeCcccHhHHHHcC
Q 015368 55 AKDVVSLNGKNFSEFMGK--NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--------EADLVMVDAYLEKDLAKEYN 124 (408)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~--~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~--------~v~~~~v~~~~~~~~~~~~~ 124 (408)
...+..++.++|+..+.+ +++++|+|||+||++|+.+.|.|+++++.+++ ++.|+.|||++++++|++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 467899999999988754 37999999999999999999999999999973 49999999999999999999
Q ss_pred CCcCcEEEEEeCC--eEeEEeeCCCCHHH
Q 015368 125 ILAYPTLYLFVAG--VRQFQFFGERTRDV 151 (408)
Q Consensus 125 i~~~Pt~~~~~~g--~~~~~~~g~~~~~~ 151 (408)
|.++||+++|++| ....+|.|.++.+.
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e~ 130 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLEH 130 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEEE
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHHH
Confidence 9999999999843 34567777655443
No 126
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.68 E-value=5.9e-15 Score=127.99 Aligned_cols=196 Identities=13% Similarity=0.176 Sum_probs=152.2
Q ss_pred CcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 57 ~~~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
.+..| +.++++..+.++++++|-|+++|| ....+.|.++|+.+. ++.|+.+. +.++|+++++++ |++++|+
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l~-~~~F~~t~---~~~v~~~~~v~~-p~i~lfk 81 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDLE---IPAVPILHSMVQKFP-GVSFGIST---DSEVLTHYNITG-NTICLFR 81 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCSC---STHHHHHHHHTTTCT-TSEEEEEC---CHHHHHHTTCCS-SEEEEEE
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCCC---chhHHHHHHHHHhCC-CceEEEEC---CHHHHHHcCCCC-CeEEEEE
Confidence 44455 668999999889999999999995 568999999999994 89998764 788999999998 9999999
Q ss_pred CC-eEeEEeeC----CCCHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEE-EEecCCCCc---CHHHHHHHh-cc
Q 015368 136 AG-VRQFQFFG----ERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVL-GFLHDLEGM---ESEELAAAS-KL 205 (408)
Q Consensus 136 ~g-~~~~~~~g----~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi-~f~~~~~~~---~~~~~~~~a-~~ 205 (408)
++ .....|.| .++.+.|.+||..+..|.+.++ +.+.+..+.....+.++ .|...++.. ..+.+..+| ++
T Consensus 82 ~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~-t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~ 160 (227)
T 4f9z_D 82 LVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEY-NPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLF 160 (227)
T ss_dssp TTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEEC-CHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHT
T ss_pred ecCcccccccccccCCCCHHHHHHHHHHhCCCceeec-CcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHh
Confidence 54 34567774 7999999999999999999998 56777777766544444 454555543 345677777 68
Q ss_pred CCceeEEEecC-----HhHHhhcCCCCCCCCCeEEEeecCCCccccc-CCcCCHHHHHHHHhc
Q 015368 206 HSDVNFYQTTS-----ADVAEFFHIHPKSKRPALIFLHLEAGKATPF-RHQFTRLAIANFVTH 262 (408)
Q Consensus 206 ~~~~~f~~~~~-----~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y-~g~~~~~~i~~fi~~ 262 (408)
++++.|+.+.. ..+.+.||++. .++|++++++..+.....+ .++++.+.|.+|++.
T Consensus 161 k~~i~F~~vd~~~~~~~~~l~~fgl~~-~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 161 QGKILFILVDSGMKENGKVISFFKLKE-SQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDG 222 (227)
T ss_dssp TTTCEEEEEETTSGGGHHHHHHTTCCG-GGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHH
T ss_pred hCCEEEEEeCCccHhHHHHHHHcCCCc-ccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHH
Confidence 88899987643 35788999973 2589999998665444444 378999999999975
No 127
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.68 E-value=1.6e-16 Score=128.76 Aligned_cols=92 Identities=23% Similarity=0.366 Sum_probs=83.3
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc----------------------cHhHHHHcCCCcC
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------EKDLAKEYNILAY 128 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------~~~~~~~~~i~~~ 128 (408)
++++++|.||++||++|+.+.|.+.++++.+++ ++.++.|+++. +..+++.|+|.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 679999999999999999999999999999987 79999999876 3478999999999
Q ss_pred cEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 129 PTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 129 Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
|++++++ +|+++.++.|..+.+.+.++|++.+...
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 9999996 9999999999999999999999887543
No 128
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.68 E-value=1.9e-16 Score=137.80 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=90.3
Q ss_pred CcEEcChhhHHHHHcCCCcE-EEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 57 DVVSLNGKNFSEFMGKNRNV-MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~-~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
.+..+++++|+.....++++ +|.|||+||++|+.+.|.++++++.+ +++.++.||++++++++++|+|.++||+++
T Consensus 119 ~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~-- 195 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQDLAEQFQVVGVPKIVI-- 195 (229)
T ss_dssp TCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCHHHHHHTTCCSSSEEEE--
T ss_pred CccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHHcCCcccCEEEE--
Confidence 45678889998877666666 88999999999999999999999998 489999999999999999999999999988
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+|+ +.++.|..+.+.|.+|+.+.+.
T Consensus 196 ~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 196 NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 886 6779999999999999988763
No 129
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.67 E-value=3e-16 Score=128.18 Aligned_cols=92 Identities=12% Similarity=0.156 Sum_probs=81.8
Q ss_pred cCCCcEEEEEecCCChhHHhh-hHHHHHHHHHhcC-CcEEEEEeCc----------------------------ccH---
Q 015368 71 GKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EADLVMVDAY----------------------------LEK--- 117 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~-~v~~~~v~~~----------------------------~~~--- 117 (408)
.++++++|+||++||++|+.+ +|.+.++++++++ ++.++.|+++ ...
T Consensus 26 ~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 26 LRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp GTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred hCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 368999999999999999996 9999999999985 7999999863 122
Q ss_pred --hHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhCC
Q 015368 118 --DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 118 --~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~ 162 (408)
.+++.|++.++|++++++ +|+++.++.|..+.+.+.+.|++.+..
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 589999999999999997 999999999999999999999988753
No 130
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.67 E-value=1.8e-16 Score=130.31 Aligned_cols=105 Identities=21% Similarity=0.270 Sum_probs=89.4
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeC----------------------
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDA---------------------- 113 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~---------------------- 113 (408)
.+.+++++.++....++++++|+||++||++|+.++|.+.+++++++. ++.++.|++
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 566777777776556789999999999999999999999999998754 677766654
Q ss_pred ------cccHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 114 ------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 114 ------~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+.+.+++++|+|.++|++++++ +|+++.++.|..+.+++.++|++.+.
T Consensus 102 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3456789999999999999996 99999999999999999999988764
No 131
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.67 E-value=2e-16 Score=128.28 Aligned_cols=93 Identities=18% Similarity=0.193 Sum_probs=82.7
Q ss_pred cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc------------------------cHhHHHHcC-
Q 015368 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------------EKDLAKEYN- 124 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~------------------------~~~~~~~~~- 124 (408)
.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|+++. ...+++.|+
T Consensus 22 ~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 22 LKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 3689999999999999999999999999999965 89999999973 345778899
Q ss_pred -CCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 125 -ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 125 -i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
+.++|++++++ +|+++.++.|..+.+++.++|++.....
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred ccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 99999999997 8999999999999999999999887543
No 132
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.66 E-value=1.7e-16 Score=127.56 Aligned_cols=85 Identities=27% Similarity=0.502 Sum_probs=78.8
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhc-CCcEEEEEeCcc-------------------------cHhHHHHcCC
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK-GEADLVMVDAYL-------------------------EKDLAKEYNI 125 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~-~~v~~~~v~~~~-------------------------~~~~~~~~~i 125 (408)
++++++|.||++||++|+.+.|.+.+++++++ .++.++.|+++. +..+++.|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 68999999999999999999999999999998 489999999964 5689999999
Q ss_pred CcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHH
Q 015368 126 LAYPTLYLFV-AGVRQFQFFGERTRDVISAWV 156 (408)
Q Consensus 126 ~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i 156 (408)
.++|++++++ +|+++.++.|..+.+.+.++|
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 9999999996 998889999999999999887
No 133
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.66 E-value=3.2e-17 Score=134.64 Aligned_cols=97 Identities=19% Similarity=0.309 Sum_probs=83.7
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHh-HHHHcCC--CcCcEEEEEe-CCeE
Q 015368 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD-LAKEYNI--LAYPTLYLFV-AGVR 139 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~-~~~~~~i--~~~Pt~~~~~-~g~~ 139 (408)
++++....++++++|+|||+||++|+.+.|.+.++++.+..++.|+.||++.+.+ ++..|++ .++||+++|+ +|++
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 5666677789999999999999999999999999877765568888899988877 8899998 6699999995 9988
Q ss_pred eEEeeCC----------CCHHHHHHHHHhHh
Q 015368 140 QFQFFGE----------RTRDVISAWVREKM 160 (408)
Q Consensus 140 ~~~~~g~----------~~~~~l~~~i~~~~ 160 (408)
+.++.|. .+.+.+.++|++.+
T Consensus 117 ~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 117 HPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp CTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred EEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 8888884 78999999998776
No 134
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.66 E-value=1e-15 Score=134.01 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=85.7
Q ss_pred cChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhc----CCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 61 LNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK----GEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 61 l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~----~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
++.+.++.+. ..++++++.||||||++|+.+.|.|++++..++ .++.+..||++++++++++|+|.++||+++
T Consensus 125 l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i-- 202 (243)
T 2hls_A 125 LEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI-- 202 (243)
T ss_dssp CCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--
T ss_pred CCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--
Confidence 4555555443 246678999999999999999999999999983 479999999999999999999999999988
Q ss_pred CCeEeEEeeCCCCHHHHHHHHHhHhCCCc
Q 015368 136 AGVRQFQFFGERTRDVISAWVREKMTLGT 164 (408)
Q Consensus 136 ~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (408)
+|+. .|.|.++.++|.++|.+.++...
T Consensus 203 ~G~~--~~~G~~~~~~l~~~l~~~~~~~~ 229 (243)
T 2hls_A 203 NGYL--VFVGVPYEEDFLDYVKSAAEGRL 229 (243)
T ss_dssp TTEE--EEESCCCHHHHHHHHHHHHTTCC
T ss_pred CCEE--EEeCCCCHHHHHHHHHHHhhccc
Confidence 8864 39999999999999999986543
No 135
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.65 E-value=2.7e-16 Score=127.55 Aligned_cols=106 Identities=18% Similarity=0.228 Sum_probs=90.0
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccH-------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK------------------- 117 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~------------------- 117 (408)
+..++++.+...-..+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+.
T Consensus 15 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 94 (152)
T 2lja_A 15 YPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHM 94 (152)
T ss_dssp EEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEEC
T ss_pred eecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeec
Confidence 44444444432223679999999999999999999999999999987 6999999998765
Q ss_pred ----hHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhCCC
Q 015368 118 ----DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLG 163 (408)
Q Consensus 118 ----~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~ 163 (408)
.+++.|++.++|++++++ +|+++.++.|..+.+.+.++|++.....
T Consensus 95 d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 95 GTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp SSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred CcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 789999999999999998 9988888999999999999999887544
No 136
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.65 E-value=2.1e-16 Score=127.54 Aligned_cols=103 Identities=13% Similarity=0.175 Sum_probs=85.8
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccHh------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKD------------------ 118 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~~------------------ 118 (408)
+..++++.+...-..+++++|.||++||++|+.+.|.+.++++.+++ ++.++.|+++.+.+
T Consensus 16 l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 3hcz_A 16 MTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVR 95 (148)
T ss_dssp CBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEE
T ss_pred EecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEe
Confidence 33445554443334789999999999999999999999999999987 59999999997766
Q ss_pred -------HHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 119 -------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 119 -------~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+++.|++.++|++++++ +|+++.++.|..+.+.+.+.+.+.+
T Consensus 96 d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 96 DSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred ccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 99999999999999996 9999999999877777777766543
No 137
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.65 E-value=2.1e-14 Score=139.82 Aligned_cols=297 Identities=15% Similarity=0.175 Sum_probs=215.7
Q ss_pred CcEEcChhhHHHHHcCCC--cEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 57 DVVSLNGKNFSEFMGKNR--NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~--~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
.+..++. ++.++..++ .++|.|+.++... ..+.|.+++..+++++.|+.++ ++++++++. ++++
T Consensus 124 ~v~~i~~--~~~~~~~~~~~~~~v~~f~~~~~~---~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~----i~l~ 189 (504)
T 2b5e_A 124 AVAVVAD--LPAYLANETFVTPVIVQSGKIDAD---FNATFYSMANKHFNDYDFVSAE-----NADDDFKLS----IYLP 189 (504)
T ss_dssp SEEECSC--HHHHHHHSCCSSCEEEEEESCCHH---HHHHHHHHHHHTTTTCEEEEEE-----CTTSCCEEE----EEET
T ss_pred cceeHHH--HHHHHhcCCCceEEEEEeCCCCch---HHHHHHHHHHHhhcCcEEEEEH-----HHHHhcCCe----EEec
Confidence 4555555 666665555 6677777776544 5678999999998899999887 467777765 6667
Q ss_pred eCCeEeEEeeCC-C---CHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEEEEecCCCC--cCHHHHHHHh-ccCC
Q 015368 135 VAGVRQFQFFGE-R---TRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEG--MESEELAAAS-KLHS 207 (408)
Q Consensus 135 ~~g~~~~~~~g~-~---~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~--~~~~~~~~~a-~~~~ 207 (408)
++......|.|. . +.+.|.+||.....|.+.++ +.+.+..+.......++.++...+. .....+..+| ++++
T Consensus 190 ~~~~~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~-t~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~ 268 (504)
T 2b5e_A 190 SAMDEPVVYNGKKADIADADVFEKWLQVEALPYFGEI-DGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRG 268 (504)
T ss_dssp TEEEEEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBC-CHHHHHHHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCcccccCCcccccCCHHHHHHHHHhcccCCcccC-CHhHHHHHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhcCC
Confidence 642255678898 6 99999999999998888888 5677888887777777766654222 1344566666 6788
Q ss_pred ceeEEEecCH---hHHhhcCCCCCCCCCeEEEeecCCCcccccC--Cc-----------CCHHHHHHHHhcCC-------
Q 015368 208 DVNFYQTTSA---DVAEFFHIHPKSKRPALIFLHLEAGKATPFR--HQ-----------FTRLAIANFVTHTK------- 264 (408)
Q Consensus 208 ~~~f~~~~~~---~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~--g~-----------~~~~~i~~fi~~~~------- 264 (408)
++.|+.+... .+++.||+ . ...|++++++..+...+.+. ++ ++.+.+.+|+....
T Consensus 269 ~i~F~~id~~~~~~~~~~~gl-~-~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~ 346 (504)
T 2b5e_A 269 LMNFVSIDARKFGRHAGNLNM-K-EQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPI 346 (504)
T ss_dssp TCEEEEEEHHHHTTHHHHTTC-C-SCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCC
T ss_pred eeEEEEEehhhhHHHHHHcCC-c-ccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChh
Confidence 8999887443 46788998 2 36899999987544444444 55 78899999987421
Q ss_pred -----C-----CceEeecccccccccc-CCccE-EEEEeeCCC-chHHHHHHHHHHHHhc-C--CcceEEEEEEEcCCcc
Q 015368 265 -----H-----PLVVTLTIHNAQFVFQ-DPRKQ-LWLFAPAYG-SDKVILTFEEVAKALK-G--KVNMLLHVYVEMNSEG 328 (408)
Q Consensus 265 -----~-----p~v~~lt~~~~~~~~~-~~~~~-~i~f~~~~~-~~~~~~~~~~vA~~~~-~--~~~~i~f~~vd~~~~~ 328 (408)
. ..+..++..++..... .+.++ +.++.+||. |+...+.+.++|.++. + + +.++.+|++...
T Consensus 347 ~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~---v~~~~vd~~~~~ 423 (504)
T 2b5e_A 347 VKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSD---VLIAKLDHTEND 423 (504)
T ss_dssp CCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSS---CEEEEEEGGGCC
T ss_pred hhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCc---EEEEEecCCccc
Confidence 1 2467888888887653 34455 446677887 9999999999999987 3 5 999999987543
Q ss_pred cccchhhhccCCCCCCcEEEEEccCCc--cccCCCCCChHHHHHHHHHHhcCcc
Q 015368 329 VGRRVSQEFGVSGNAPRVIAYSARDAK--KYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 329 ~~~~l~~~~~i~~~~~p~i~i~~~~~~--~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
..+ +++.. .|.++++..+.. ...+.|..+.+.+.+||++.....+
T Consensus 424 ----~~~-~~v~~--~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 424 ----VRG-VVIEG--YPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp ----CSS-CCCSS--SSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred ----ccc-CCcee--cCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCCC
Confidence 334 78843 688888854333 5678899999999999999877665
No 138
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.65 E-value=5.5e-16 Score=126.06 Aligned_cols=104 Identities=14% Similarity=0.245 Sum_probs=87.2
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC------------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA------------------------ 113 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~------------------------ 113 (408)
+..++++.++..-.+ ++++|.||++||++|+.+.|.+.++++++ ++.++.|++
T Consensus 16 l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 92 (154)
T 3ia1_A 16 LLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLA 92 (154)
T ss_dssp EECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBC
T ss_pred EECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCccccc
Confidence 334444443322234 89999999999999999999999999999 799999999
Q ss_pred ---cccHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhCCCc
Q 015368 114 ---YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMTLGT 164 (408)
Q Consensus 114 ---~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~~~~ 164 (408)
+....+++.|++.++|++++++ +|+++.++.|..+.+++.++|++.....-
T Consensus 93 d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 93 SDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADLE 147 (154)
T ss_dssp CSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC-
T ss_pred ccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCccc
Confidence 3667899999999999999997 99999999999999999999999886543
No 139
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.64 E-value=7e-16 Score=125.26 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=87.1
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeC-----------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDA----------------------- 113 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~----------------------- 113 (408)
+..++++.+.....++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+.
T Consensus 13 l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (153)
T 2l5o_A 13 LPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMY 92 (153)
T ss_dssp EECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEE
T ss_pred eecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEc
Confidence 34445544443333789999999999999999999999999999987 688887764
Q ss_pred cccHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 114 YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 114 ~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+.+..+++.|+|.++|++++++ +|+++.++.|..+.+.+.++|++.+.
T Consensus 93 d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 93 DADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp CSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3456789999999999999996 89888999999999999999998874
No 140
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.64 E-value=5.6e-16 Score=124.20 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=78.2
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHH---HHHHhcC-CcEEEEEeCcccHh---------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA---AAKMLKG-EADLVMVDAYLEKD--------------- 118 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~---~~~~~~~-~v~~~~v~~~~~~~--------------- 118 (408)
+...+++.+...-..+++++|+|||+||++|+.++|.+.+ +++++++ ++.++.|+.+.+.+
T Consensus 16 l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~ 95 (142)
T 3eur_A 16 YTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTN 95 (142)
T ss_dssp EEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEE
T ss_pred EEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhccccccc
Confidence 4444554443222357999999999999999999999999 9999976 89999999987643
Q ss_pred ---------HHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHh
Q 015368 119 ---------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVRE 158 (408)
Q Consensus 119 ---------~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~ 158 (408)
+++.|+|.++|++++++ +|+++.+..| .+++.++|++
T Consensus 96 ~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~e 142 (142)
T 3eur_A 96 GYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDAT---LQKVEQYLAE 142 (142)
T ss_dssp EECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEEC---HHHHHHHHHC
T ss_pred ccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCCC---HHHHHHHHhC
Confidence 46789999999999998 8988777654 6888888753
No 141
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.63 E-value=1e-15 Score=121.53 Aligned_cols=89 Identities=22% Similarity=0.291 Sum_probs=79.5
Q ss_pred cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC----------------------------cccHhHHHH
Q 015368 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA----------------------------YLEKDLAKE 122 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~----------------------------~~~~~~~~~ 122 (408)
.++++++|.||++||++|+.+.|.+.++++++++++.++.|++ +.+..++++
T Consensus 20 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 20 YKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp GTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 3689999999999999999999999999999877899999953 335578999
Q ss_pred cCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhH
Q 015368 123 YNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 123 ~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
|++.++|++++++ +|+++.++.|..+.+++.++|++.
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred cCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 9999999999996 999999999999999999998753
No 142
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.63 E-value=1.9e-15 Score=122.49 Aligned_cols=93 Identities=18% Similarity=0.291 Sum_probs=81.5
Q ss_pred cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccH----------------------hHHHHcCCCc
Q 015368 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK----------------------DLAKEYNILA 127 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~----------------------~~~~~~~i~~ 127 (408)
.++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++.+. .+++.|++.+
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 26 KTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp GTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred hCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 3689999999999999999999999999999987 5999999998665 6788999999
Q ss_pred CcEEEEEe-CCeEeEEeeCCC--CHHHHHHHHHhHhCCC
Q 015368 128 YPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMTLG 163 (408)
Q Consensus 128 ~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~~~ 163 (408)
+|++++++ +|+++.++.|.. +.+.+.++|++.+...
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 99999996 999989999864 5589999999887543
No 143
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.63 E-value=1.6e-15 Score=123.07 Aligned_cols=101 Identities=12% Similarity=0.030 Sum_probs=82.1
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccHh-----------------
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEKD----------------- 118 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~~----------------- 118 (408)
.+.+++++.++..-..+++++|.||++||++|+.++|.+.++++++++ ++.++.|+++...+
T Consensus 19 ~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~ 98 (152)
T 2lrt_A 19 QLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDA 98 (152)
T ss_dssp CEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECS
T ss_pred EEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECC
Confidence 344444444432223578999999999999999999999999999987 69999999987654
Q ss_pred ------HHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHH
Q 015368 119 ------LAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (408)
Q Consensus 119 ------~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (408)
+++.|++.++|++++++ +|+++.++.|..+.++...-+.
T Consensus 99 ~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 99 NGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIKDLDEAIKKLL 144 (152)
T ss_dssp SGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHHHHH
T ss_pred CCcchHHHHHcCcccCceEEEECCCCeEEEecCCHHHHHHHHHHHH
Confidence 88999999999999997 9999999999988777654443
No 144
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.63 E-value=9.3e-16 Score=124.42 Aligned_cols=87 Identities=22% Similarity=0.320 Sum_probs=76.4
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------------------------cHhHHHHcCC
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYNI 125 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------------------------~~~~~~~~~i 125 (408)
++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++. +..+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 679999999999999999999999999999987 69999999987 5789999999
Q ss_pred CcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 126 LAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 126 ~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
.++|++++++ +|+++.++. +.+++.++|++.+.
T Consensus 108 ~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp CSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred CcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 9999999996 998877763 44678888877663
No 145
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.62 E-value=9.2e-16 Score=123.69 Aligned_cols=86 Identities=22% Similarity=0.403 Sum_probs=76.7
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHh-cC-CcEEEEEeCccc-------------------------HhHHHHcC
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML-KG-EADLVMVDAYLE-------------------------KDLAKEYN 124 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~-~~-~v~~~~v~~~~~-------------------------~~~~~~~~ 124 (408)
++++++|.||++||++|+.+.|.+.++++++ ++ ++.++.|+++.. ..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 6899999999999999999999999999999 66 599999998873 47899999
Q ss_pred CCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 125 ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 125 i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+.++|++++++ +|+++.++. +.+.+.++|++.+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 145 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI---QGEALTGKLKELL 145 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC
T ss_pred CCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHH
Confidence 99999999996 897777665 8889999998765
No 146
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.62 E-value=1.3e-15 Score=108.09 Aligned_cols=74 Identities=22% Similarity=0.286 Sum_probs=66.4
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCC-CHHHHHH
Q 015368 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGER-TRDVISA 154 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~-~~~~l~~ 154 (408)
..|.|||+||++|+.+.|.++++++.+++++.++.|| +.+++++|+|.++||+++ +|+.+.+ |.. +.+++.+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~ 74 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKK 74 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHH
Confidence 4689999999999999999999999998889999998 788999999999999988 8966555 887 8999888
Q ss_pred HH
Q 015368 155 WV 156 (408)
Q Consensus 155 ~i 156 (408)
++
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 75
No 147
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.62 E-value=8.9e-16 Score=125.58 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=76.0
Q ss_pred EcChhhHHHHH-cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcC---CCcCcEEEEEe
Q 015368 60 SLNGKNFSEFM-GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYN---ILAYPTLYLFV 135 (408)
Q Consensus 60 ~l~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~---i~~~Pt~~~~~ 135 (408)
.+++..+..+. .++++++|+|||+||+||+.+.|.++++++.++ ++.|..||.+++++++++|+ +.++||+++++
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 35555555443 357899999999999999999999999999876 79999999999999999997 99999999999
Q ss_pred C-CeEeEEeeCCCCHHHHHHHHHh
Q 015368 136 A-GVRQFQFFGERTRDVISAWVRE 158 (408)
Q Consensus 136 ~-g~~~~~~~g~~~~~~l~~~i~~ 158 (408)
+ |+++.++ |.... .+.+.+.+
T Consensus 119 ~~G~~~~~~-g~~p~-~~~~~i~~ 140 (167)
T 1z6n_A 119 EEFNLLGRF-VERPQ-AVLDGGPQ 140 (167)
T ss_dssp TTCCEEEEE-ESSCH-HHHHHCHH
T ss_pred CCCCEEEEE-cCCCH-HHHHhHHH
Confidence 5 5776666 55443 33344443
No 148
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.62 E-value=1.7e-15 Score=126.91 Aligned_cols=103 Identities=15% Similarity=0.186 Sum_probs=85.4
Q ss_pred cEEc--ChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-Cc------EEEEEeCcc-cHhHHHHc----
Q 015368 58 VVSL--NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EA------DLVMVDAYL-EKDLAKEY---- 123 (408)
Q Consensus 58 ~~~l--~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v------~~~~v~~~~-~~~~~~~~---- 123 (408)
+..+ +++.+...-.++++++|.||++||++|+.++|.+.++++++++ ++ .|+.|+++. +++.+++|
T Consensus 42 l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~ 121 (183)
T 3lwa_A 42 GDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDN 121 (183)
T ss_dssp EEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHT
T ss_pred ccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHc
Confidence 4445 5554443334689999999999999999999999999999976 48 999999998 66666655
Q ss_pred ---------------------CCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 124 ---------------------NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 124 ---------------------~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++.++|++++++ +|+++.++.|..+.++|.++|++.+
T Consensus 122 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 122 GLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp TCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 689999999997 8999999999999999999998875
No 149
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.62 E-value=7.2e-16 Score=123.52 Aligned_cols=98 Identities=18% Similarity=0.290 Sum_probs=77.0
Q ss_pred EcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHH---HHHHhcC-CcEEEEEeCcccHhH----------------
Q 015368 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA---AAKMLKG-EADLVMVDAYLEKDL---------------- 119 (408)
Q Consensus 60 ~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~---~~~~~~~-~v~~~~v~~~~~~~~---------------- 119 (408)
.++++.+...-.++++++|+||++||++|+.++|.+.+ +++.+++ ++.++.|+++.+.+.
T Consensus 14 ~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 93 (142)
T 3ewl_A 14 TVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGW 93 (142)
T ss_dssp CTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceee
Confidence 34444433222368999999999999999999999998 8888865 799999999876543
Q ss_pred --------HHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 120 --------AKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 120 --------~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++.|+|.++|++++++ +|+++. +..+.+++.++|++..
T Consensus 94 d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 94 NKAGDIRTRQLYDIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CTTCHHHHTTCSCCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred CCccchhhHHHcCCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 3389999999999997 886654 5678999999998654
No 150
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.62 E-value=1.1e-15 Score=126.12 Aligned_cols=109 Identities=14% Similarity=0.244 Sum_probs=86.8
Q ss_pred CCCCCCCccCCCcEEc--ChhhHHHH-HcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC---------
Q 015368 46 NNHTWPLLYAKDVVSL--NGKNFSEF-MGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA--------- 113 (408)
Q Consensus 46 ~~~~~~~~~~~~~~~l--~~~~~~~~-~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~--------- 113 (408)
.|...|.. .+..+ +++.+... +.++++++|+||++||++|+.+.|.+++++++ ++.++.|++
T Consensus 24 ~G~~~P~f---~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~ 97 (168)
T 2b1k_A 24 IGKPVPKF---RLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAIS 97 (168)
T ss_dssp TTSBCCCC---EEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHH
T ss_pred cCCcCCCe---EeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHH
Confidence 34444443 44455 55555432 35789999999999999999999999999886 588888873
Q ss_pred --------------cccHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 114 --------------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 114 --------------~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+.+..++++|+|.++|++++++ +|+++.++.|..+.+.+.++|++.+
T Consensus 98 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 98 WLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp HHHHHCCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred HHHHcCCCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 4566789999999999888887 9988899999999999999888765
No 151
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.62 E-value=1.9e-15 Score=123.50 Aligned_cols=105 Identities=16% Similarity=0.315 Sum_probs=85.6
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------------------cH
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------EK 117 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------------------~~ 117 (408)
+..++++.+.....++++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++. +.
T Consensus 26 l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~ 105 (158)
T 3hdc_A 26 LPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATG 105 (158)
T ss_dssp EECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTS
T ss_pred eEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchH
Confidence 44455554443334689999999999999999999999999999985 89999999987 67
Q ss_pred hHHHHcCCCcCcEEEEEe-CCeEeEEeeCCC--CHHHHHHHHHhHhCC
Q 015368 118 DLAKEYNILAYPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMTL 162 (408)
Q Consensus 118 ~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~~ 162 (408)
++++.|++.++|++++++ +|+++.++.|.. +.+++.+.+.+..++
T Consensus 106 ~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 106 QVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred HHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 899999999999999997 999999999974 557777777665543
No 152
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.61 E-value=7.9e-16 Score=125.87 Aligned_cols=83 Identities=18% Similarity=0.274 Sum_probs=72.1
Q ss_pred EcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHH-H--HHHHHHhcCCcEEEEEeCcccHhHHHHc--------CCCcC
Q 015368 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPE-F--AAAAKMLKGEADLVMVDAYLEKDLAKEY--------NILAY 128 (408)
Q Consensus 60 ~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~-~--~~~~~~~~~~v~~~~v~~~~~~~~~~~~--------~i~~~ 128 (408)
...++.|+....++|+++|+|||+||++|+.+.|+ | .++++.+++++.++.||.++.+++++.| |+.++
T Consensus 26 ~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~ 105 (173)
T 3ira_A 26 PWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGW 105 (173)
T ss_dssp CSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCS
T ss_pred CcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCC
Confidence 34567888888899999999999999999999994 3 5677777668999999999999999988 99999
Q ss_pred cEEEEEe-CCeEeEE
Q 015368 129 PTLYLFV-AGVRQFQ 142 (408)
Q Consensus 129 Pt~~~~~-~g~~~~~ 142 (408)
|++++++ +|+.+..
T Consensus 106 Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 106 PLNIIMTPGKKPFFA 120 (173)
T ss_dssp SEEEEECTTSCEEEE
T ss_pred cceeeECCCCCceee
Confidence 9999998 8976654
No 153
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.61 E-value=1.7e-15 Score=123.34 Aligned_cols=95 Identities=18% Similarity=0.283 Sum_probs=80.3
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc-----------------------ccHhHH
Q 015368 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----------------------LEKDLA 120 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~-----------------------~~~~~~ 120 (408)
+.++.....+++++|.||++||++|+.+.|.+.+++++ +++.++.|+++ .+..++
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS 110 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH
Confidence 44543334689999999999999999999999999877 46888888864 345788
Q ss_pred HHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 121 KEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 121 ~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+.|++.++|++++++ +|+++.++.|..+.+.+.++|++.+
T Consensus 111 ~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 111 IEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp HHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred HhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999999988886 9988899999999999999988765
No 154
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.61 E-value=2.7e-15 Score=124.84 Aligned_cols=111 Identities=16% Similarity=0.282 Sum_probs=87.6
Q ss_pred cCCCCCCCCccCCCcEEcCh--hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC--------
Q 015368 44 LNNNHTWPLLYAKDVVSLNG--KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------- 113 (408)
Q Consensus 44 ~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~-------- 113 (408)
...|...|.+ .+..+++ ..+......+++++|+||++||++|+.++|.+.+++++ ++.++.|++
T Consensus 30 ~~~G~~~P~f---~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~ 103 (176)
T 3kh7_A 30 ALIGKPFPAF---DLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAI 103 (176)
T ss_dssp TTTTSBCCCC---EEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHH
T ss_pred cccCCcCCCc---EecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHH
Confidence 3344455543 3444444 33443334689999999999999999999999999887 588888885
Q ss_pred ---------------cccHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 114 ---------------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 114 ---------------~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+.+..+++.|++.++|++++++ +|+++.++.|..+.+.+.++|.+.+
T Consensus 104 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 104 KWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp HHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred HHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3445788999999999999997 9999999999999999999888765
No 155
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.60 E-value=3e-15 Score=121.62 Aligned_cols=103 Identities=20% Similarity=0.320 Sum_probs=84.3
Q ss_pred EEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc---------------------
Q 015368 59 VSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE--------------------- 116 (408)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~--------------------- 116 (408)
..++++.+...-.++++++|.||++||++|+.+.|.+.++++.+++ ++.++.|+++.+
T Consensus 14 ~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d 93 (154)
T 3kcm_A 14 NTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLD 93 (154)
T ss_dssp ECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEEC
T ss_pred EcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEec
Confidence 3344444432223689999999999999999999999999999987 899999999875
Q ss_pred --HhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCC--CHHHHHHHHHhHhC
Q 015368 117 --KDLAKEYNILAYPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (408)
Q Consensus 117 --~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (408)
..+++.|++.++|++++++ +|+++.++.|.. +.+++.++|++...
T Consensus 94 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 94 ADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp TTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred CchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 3488999999999999997 999989999985 66799999987653
No 156
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.60 E-value=1.2e-15 Score=122.37 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=69.4
Q ss_pred hHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHH---HHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe-CCeEe
Q 015368 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAA---KMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV-AGVRQ 140 (408)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~---~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~-~g~~~ 140 (408)
.+..+..++++++|+|||+||++|+.+.|.+.+.. +..+.++..+.|| ++..+++.++++.++||+++++ +|+++
T Consensus 36 al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~v 114 (151)
T 3ph9_A 36 GLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTVR 114 (151)
T ss_dssp HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCBC
T ss_pred HHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCEE
Confidence 34455578999999999999999999999998643 2222144444444 2445678899999999999999 99988
Q ss_pred EEeeCC-------CCH---HHHHHHHHhHh
Q 015368 141 FQFFGE-------RTR---DVISAWVREKM 160 (408)
Q Consensus 141 ~~~~g~-------~~~---~~l~~~i~~~~ 160 (408)
.+..|. +.. +.+.+.+++.+
T Consensus 115 ~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 115 ADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred EEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 888998 444 44555555443
No 157
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=6e-15 Score=119.33 Aligned_cols=100 Identities=17% Similarity=0.290 Sum_probs=81.7
Q ss_pred cEEcChhhHHHH--HcCCCcEEEEEecCCChh--HHhhhHHHHHHHHHh-cC-CcEEEEEeCcccH--------------
Q 015368 58 VVSLNGKNFSEF--MGKNRNVMVMFYANWCYW--SKKLAPEFAAAAKML-KG-EADLVMVDAYLEK-------------- 117 (408)
Q Consensus 58 ~~~l~~~~~~~~--~~~~~~~~v~f~a~wC~~--C~~~~p~~~~~~~~~-~~-~v~~~~v~~~~~~-------------- 117 (408)
+..++++.+... -.++++++|+||++||++ |+.++|.+.++++++ ++ ++.++.|+++..+
T Consensus 16 l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 95 (150)
T 3fw2_A 16 LPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDW 95 (150)
T ss_dssp EEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCS
T ss_pred eECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCc
Confidence 444444444322 236799999999999999 999999999999999 66 6999999998764
Q ss_pred -----------hHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 118 -----------DLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 118 -----------~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
.+++.|++.++|++++++ +|+++.++. +.+++.+.|++.+
T Consensus 96 ~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 147 (150)
T 3fw2_A 96 EQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIV 147 (150)
T ss_dssp EEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHH
T ss_pred eEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHH
Confidence 789999999999999997 998777764 7888888887654
No 158
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.58 E-value=5.2e-15 Score=121.76 Aligned_cols=100 Identities=13% Similarity=0.254 Sum_probs=82.6
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc------------------ccH--
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------LEK-- 117 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~------------------~~~-- 117 (408)
+..++++.+...-.++++++|.||++||++|+.++|.+.+++++++ ++.|+.|+++ +..
T Consensus 22 l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~ 100 (165)
T 3ha9_A 22 LTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEM 100 (165)
T ss_dssp EEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHH
T ss_pred eecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHH
Confidence 3344444443222367999999999999999999999999999998 8999999998 442
Q ss_pred --------------------hHHHHcCCCcCcEEEEEe-CCeEeEEeeCCC-CHHHHHHHHHhHh
Q 015368 118 --------------------DLAKEYNILAYPTLYLFV-AGVRQFQFFGER-TRDVISAWVREKM 160 (408)
Q Consensus 118 --------------------~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~-~~~~l~~~i~~~~ 160 (408)
++++.|+|.++|++++++ +|+++. .|.. +.+.+.+.|++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 101 FRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp HHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 789999999999999997 886655 8888 9999999998765
No 159
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.56 E-value=1.3e-14 Score=132.86 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=86.3
Q ss_pred EcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-----------------------
Q 015368 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------- 115 (408)
Q Consensus 60 ~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------- 115 (408)
..+++.+...-.++|+++|+||++||++|+.++|.+.++++++++ ++.++.|++++
T Consensus 69 d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv 148 (352)
T 2hyx_A 69 TPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPI 148 (352)
T ss_dssp SGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCE
T ss_pred CCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccE
Confidence 344444443334689999999999999999999999999999987 79999998753
Q ss_pred ----cHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 116 ----EKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 116 ----~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+..+++.|+|.++|++++++ +|+++.++.|..+.+.+.++|++.+
T Consensus 149 ~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 149 ALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp EECTTSHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred EeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 35789999999999999997 9999999999999999999998876
No 160
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.56 E-value=1.8e-14 Score=121.00 Aligned_cols=106 Identities=20% Similarity=0.273 Sum_probs=84.7
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc-----HhHHHHcCCC-----
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----KDLAKEYNIL----- 126 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~-----~~~~~~~~i~----- 126 (408)
+.+++++.++..-.++++++|+||++||++|+.++|.+.++++++++ ++.++.|+++.. ..+++++++.
T Consensus 45 l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 124 (186)
T 1jfu_A 45 FEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYF 124 (186)
T ss_dssp EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCE
T ss_pred eEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceE
Confidence 33444444432223689999999999999999999999999999974 899999999865 4567777774
Q ss_pred ------------------cCcEEEEEe-CCeEeEEeeCCCC--HHHHHHHHHhHhCCC
Q 015368 127 ------------------AYPTLYLFV-AGVRQFQFFGERT--RDVISAWVREKMTLG 163 (408)
Q Consensus 127 ------------------~~Pt~~~~~-~g~~~~~~~g~~~--~~~l~~~i~~~~~~~ 163 (408)
++|++++++ +|+++.++.|..+ .+++.++|++.+..+
T Consensus 125 ~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 125 NDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp ECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred ECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 899999997 9999899999865 789999999887543
No 161
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.56 E-value=7.2e-15 Score=117.82 Aligned_cols=84 Identities=14% Similarity=0.171 Sum_probs=71.4
Q ss_pred cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcccH--------------------------hHHHHc
Q 015368 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLEK--------------------------DLAKEY 123 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~~--------------------------~~~~~~ 123 (408)
.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|+++.+. .+++.|
T Consensus 30 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 30 QLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 3679999999999999999999999999999986 7999999988532 577899
Q ss_pred CCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHH
Q 015368 124 NILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVR 157 (408)
Q Consensus 124 ~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 157 (408)
+|.++|++++++ +|+++.+.. ..+++.+.++
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 141 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVIIAANV---TPEKLTEILK 141 (143)
T ss_dssp TGGGCCCEEEECTTSBEEEESC---CHHHHHHHHT
T ss_pred CCCCCCcEEEECCCCEEEEccC---CHHHHHHHHH
Confidence 999999999998 998777654 4677777664
No 162
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.56 E-value=1.2e-13 Score=127.95 Aligned_cols=198 Identities=15% Similarity=0.190 Sum_probs=153.7
Q ss_pred cccccChhHHHHHhccCCeEEEEEecCCCCc--CHHH-------HHHHh-ccCC-ceeEEEe---cCHhHHhhcCCCCCC
Q 015368 164 TYSITTTDEAERILTVESKLVLGFLHDLEGM--ESEE-------LAAAS-KLHS-DVNFYQT---TSADVAEFFHIHPKS 229 (408)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~--~~~~-------~~~~a-~~~~-~~~f~~~---~~~~l~~~~~i~~~~ 229 (408)
+..+ +.++++..+..++.++|.|+++||+. ..+. +..++ .+.+ .+.|+.+ .+.++++++++.
T Consensus 13 v~~l-~~~~f~~~i~~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~--- 88 (350)
T 1sji_A 13 VVSL-TEKNFKQVLKKYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD--- 88 (350)
T ss_dssp CEEE-CHHHHHHHHTTCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC---
T ss_pred cEEC-CHHHHHHHHhhCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC---
Confidence 4555 66889999988899999999999972 2233 66666 4544 5888876 567899999999
Q ss_pred CCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCCCCceEeec-ccccccccc-CCccEEEEEeeCCCchHHHHHHHHHH
Q 015368 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT-IHNAQFVFQ-DPRKQLWLFAPAYGSDKVILTFEEVA 307 (408)
Q Consensus 230 ~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt-~~~~~~~~~-~~~~~~i~f~~~~~~~~~~~~~~~vA 307 (408)
++|++++|+.+ ....|.|.++.+.|.+|+....-|.+.+++ .+++..+.. ...+.++.|.... +......|.++|
T Consensus 89 ~~Pt~~~~~~g--~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~-~~~~~~~~~~~A 165 (350)
T 1sji_A 89 EEGSLYVLKGD--RTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSE-ESEYYKAFEEAA 165 (350)
T ss_dssp STTEEEEEETT--EEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCT-TSHHHHHHHHHH
T ss_pred ccceEEEEECC--cEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCC-CcHHHHHHHHHH
Confidence 69999999765 367899999999999999999999999985 566777665 4445555555443 345568899999
Q ss_pred HHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEcc-CCccccCCCC-CChHHHHHHHHHHhcCcc
Q 015368 308 KALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLNGE-LTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 308 ~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~-~~~~y~~~~~-~~~~~i~~Fi~~~~~gk~ 380 (408)
..++++ +.|+.+. .+.+++.+|++ .|.++++.. +.....|+|. .+.+.|.+|+++..-+.+
T Consensus 166 ~~~~~~---~~f~~~~------~~~~~~~~~v~---~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v 228 (350)
T 1sji_A 166 EHFQPY---IKFFATF------DKGVAKKLSLK---MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTL 228 (350)
T ss_dssp HHTTTT---SEEEEEC------CHHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSE
T ss_pred HhhccC---cEEEEEC------CHHHHHHcCCC---CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccch
Confidence 999988 9999986 23678899996 578888876 4455567886 899999999999877666
No 163
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.55 E-value=4.9e-13 Score=120.46 Aligned_cols=204 Identities=11% Similarity=0.155 Sum_probs=151.4
Q ss_pred CCcccccChhHHHHHhc-cCCeEEEEEecCCCCcCH---HHHHHHh-ccCCceeEEEe-----cCHhHHhhcCCCCCCCC
Q 015368 162 LGTYSITTTDEAERILT-VESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT-----TSADVAEFFHIHPKSKR 231 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~-~~~~~vi~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~-----~~~~l~~~~~i~~~~~~ 231 (408)
..+..+ +.++++..+. .+.+++|.|+++||.++. +.+..++ .+.+.+.++.+ .+..++++|++. ++
T Consensus 17 ~~vv~l-t~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~---~~ 92 (298)
T 3ed3_A 17 PHISEL-TPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVN---GF 92 (298)
T ss_dssp TTCEEC-CHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCC---BS
T ss_pred CCeEEe-CHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCC---cc
Confidence 345566 6788988884 567899999999999854 4566666 56666777665 356899999999 59
Q ss_pred CeEEEeecCC----------------CcccccCCcCCHHHHHHHHhcCCCCceEeec-cccccccccCC-ccEEEEEeeC
Q 015368 232 PALIFLHLEA----------------GKATPFRHQFTRLAIANFVTHTKHPLVVTLT-IHNAQFVFQDP-RKQLWLFAPA 293 (408)
Q Consensus 232 p~l~~~~~~~----------------~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt-~~~~~~~~~~~-~~~~i~f~~~ 293 (408)
|++++|+.+. .....|.|.++.+.|.+|+....-|.+..++ .+++..+.... .+.+++|...
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~fs~~ 172 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSKQ 172 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEEESS
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEEcCC
Confidence 9999999764 1367899999999999999999989888885 45677766653 4777777544
Q ss_pred CCchHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchh--hhcc-----C-----------CCCCCcEEEEEcc-CC
Q 015368 294 YGSDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVS--QEFG-----V-----------SGNAPRVIAYSAR-DA 354 (408)
Q Consensus 294 ~~~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~--~~~~-----i-----------~~~~~p~i~i~~~-~~ 354 (408)
. .....|+.+|.+++++ +.|+.++..+. ..+. +.|+ + .....|.+++++. .+
T Consensus 173 ~---~~~~~f~~~A~~~~~~---~~F~~v~~~~~---a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~ 243 (298)
T 3ed3_A 173 D---KISPVYKSIALDWLGK---FDFYSISNKKL---KQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKD 243 (298)
T ss_dssp S---SCCHHHHHHHHHTBTT---EEEEEEEGGGC---CCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTT
T ss_pred C---cchHHHHHHHHHhhcC---cEEEEEcchHh---hhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCC
Confidence 3 2336789999999999 99999985432 1111 2233 2 1145799999987 66
Q ss_pred ccccCCC-CCChHHHHHHHHHHhcC
Q 015368 355 KKYVLNG-ELTLSSIKSFGEEFLED 378 (408)
Q Consensus 355 ~~y~~~~-~~~~~~i~~Fi~~~~~g 378 (408)
+.+.|.| .++.++|.+||.+-.+.
T Consensus 244 ~~~~y~g~~~~~~~i~~fi~~~~~~ 268 (298)
T 3ed3_A 244 KFWEYEGNSINKNDISKFLRDTFSI 268 (298)
T ss_dssp EEEECCCSSCCHHHHHHHHHHHHTC
T ss_pred ceEEeccccCCHHHHHHHHHhhcCC
Confidence 7777885 79999999999975543
No 164
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.54 E-value=1.5e-14 Score=122.55 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=84.3
Q ss_pred EcChhhHHHHHcCCC-cEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCc-----------------------
Q 015368 60 SLNGKNFSEFMGKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY----------------------- 114 (408)
Q Consensus 60 ~l~~~~~~~~~~~~~-~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~----------------------- 114 (408)
.++++.++..-..++ +++|+||++||++|+.++|.+.++++++++ ++.++.|+++
T Consensus 32 ~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~ 111 (196)
T 2ywi_A 32 VIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYP 111 (196)
T ss_dssp TTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCC
T ss_pred cCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCC
Confidence 344544442223566 599999999999999999999999999987 6999999984
Q ss_pred ------ccHhHHHHcCCCcCcEEEEEe-CCeEeEE---------eeCCCCHHHHHHHHHhHhCC
Q 015368 115 ------LEKDLAKEYNILAYPTLYLFV-AGVRQFQ---------FFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 115 ------~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~---------~~g~~~~~~l~~~i~~~~~~ 162 (408)
.+.++++.|++.++|++++++ +|+++.+ +.|..+.+++.+.|++.+..
T Consensus 112 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 112 FPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp SCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred ceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 355789999999999999997 8988777 45778899999999888743
No 165
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.54 E-value=1.5e-13 Score=127.84 Aligned_cols=199 Identities=13% Similarity=0.140 Sum_probs=154.4
Q ss_pred CcccccChhHHHHHhccCCeEEEEEecCCCCcC--HH-------HHHHHh-ccCC-ceeEEEe---cCHhHHhhcCCCCC
Q 015368 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME--SE-------ELAAAS-KLHS-DVNFYQT---TSADVAEFFHIHPK 228 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~--~~-------~~~~~a-~~~~-~~~f~~~---~~~~l~~~~~i~~~ 228 (408)
.+..+ +.++++..+..++.++|.|+++||++. .+ .+..++ .+.+ .+.|+.+ .+.+++++++|.
T Consensus 14 ~v~~l-t~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~-- 90 (367)
T 3us3_A 14 RVINV-NAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLT-- 90 (367)
T ss_dssp CCEEC-CTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCC--
T ss_pred ccEEC-CHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCC--
Confidence 35555 567888899889999999999999883 22 455666 4444 5888876 567899999999
Q ss_pred CCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCCCCceEeec-ccccccccc-CCccEEEEEeeCCCchHHHHHHHHH
Q 015368 229 SKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLT-IHNAQFVFQ-DPRKQLWLFAPAYGSDKVILTFEEV 306 (408)
Q Consensus 229 ~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt-~~~~~~~~~-~~~~~~i~f~~~~~~~~~~~~~~~v 306 (408)
++|++++|+.+ ....|.|.++.+.|.+|+.+...|.+..++ .+++..+.. ...+.++.|.... +......|.++
T Consensus 91 -~~PTl~~f~~G--~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~-~~~~~~~f~~~ 166 (367)
T 3us3_A 91 -EEDSIYVFKED--EVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNK-DSEHYKAFKEA 166 (367)
T ss_dssp -STTEEEEEETT--EEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCT-TCHHHHHHHHH
T ss_pred -cCceEEEEECC--cEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCC-CchHHHHHHHH
Confidence 69999999965 567999999999999999999999998886 467777766 3445555555432 34667789999
Q ss_pred HHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEcc-CCccccCCC-CCChHHHHHHHHHHhcCcc
Q 015368 307 AKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKKYVLNG-ELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 307 A~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~-~~~~y~~~~-~~~~~~i~~Fi~~~~~gk~ 380 (408)
|..++++ +.|+.+.. ..+++.+|++ .|.++++.. ......|.| ..+.+.|.+||+...-.-+
T Consensus 167 A~~~~~~---~~F~~~~~------~~~~~~~~v~---~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v 230 (367)
T 3us3_A 167 AEEFHPY---IPFFATFD------SKVAKKLTLK---LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTL 230 (367)
T ss_dssp HHHHTTT---SCEEEECC------HHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSE
T ss_pred HHhhcCC---cEEEEECC------HHHHHHcCCC---CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccce
Confidence 9999998 99999862 3677899996 377888776 455566788 5899999999998876655
No 166
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.53 E-value=1.8e-14 Score=121.24 Aligned_cols=103 Identities=19% Similarity=0.272 Sum_probs=81.8
Q ss_pred EcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc-------------------------
Q 015368 60 SLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------- 114 (408)
Q Consensus 60 ~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~------------------------- 114 (408)
.++++.+...-..+++++|.||++||++|+.++|.+.++++++++++.++.|+++
T Consensus 20 ~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~ 99 (188)
T 2cvb_A 20 DPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFP 99 (188)
T ss_dssp CTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSC
T ss_pred cCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCce
Confidence 3444443322236799999999999999999999999999999877999999983
Q ss_pred ----ccHhHHHHcCCCcCcEEEEEe-CCeEeEE--------eeCCCCHHHHHHHHHhHhCC
Q 015368 115 ----LEKDLAKEYNILAYPTLYLFV-AGVRQFQ--------FFGERTRDVISAWVREKMTL 162 (408)
Q Consensus 115 ----~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~--------~~g~~~~~~l~~~i~~~~~~ 162 (408)
.+.++++.|++.++|++++++ +|+++.+ +.|..+.++|.+.|++.+..
T Consensus 100 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 100 YLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp EEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred EEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 355789999999999999997 8977665 22334778999999888753
No 167
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.53 E-value=2.2e-14 Score=115.07 Aligned_cols=87 Identities=16% Similarity=0.214 Sum_probs=71.5
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhc--CCcEEEEEeCccc------------------
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------ 116 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~--~~v~~~~v~~~~~------------------ 116 (408)
.+..++++.++....++++++|+||++||++|+.++|.+.+++++++ .++.++.|+++..
T Consensus 12 ~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 12 NVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 34455555554333468999999999999999999999999999998 3899999998863
Q ss_pred ------HhHHHHcCCCcCcEEEEEe--CCeEeEEe
Q 015368 117 ------KDLAKEYNILAYPTLYLFV--AGVRQFQF 143 (408)
Q Consensus 117 ------~~~~~~~~i~~~Pt~~~~~--~g~~~~~~ 143 (408)
..++++|+|.++|++++++ +|+++.++
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcEEecc
Confidence 5789999999999999997 88766554
No 168
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.53 E-value=2e-14 Score=118.10 Aligned_cols=85 Identities=16% Similarity=0.230 Sum_probs=70.1
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC--CcEEEEEeCccc-------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG--EADLVMVDAYLE------------------- 116 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~v~~~~v~~~~~------------------- 116 (408)
+..+++ .+...-.++|+++|+|||+||++|++++|.+.++++++++ ++.++.|+++..
T Consensus 34 l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3s9f_A 34 LRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFA 112 (165)
T ss_dssp EEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTT
T ss_pred eecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccC
Confidence 344444 4432223689999999999999999999999999999985 899999998876
Q ss_pred -----HhHHHHcCCCcCcEEEEEe-C-CeEeEEe
Q 015368 117 -----KDLAKEYNILAYPTLYLFV-A-GVRQFQF 143 (408)
Q Consensus 117 -----~~~~~~~~i~~~Pt~~~~~-~-g~~~~~~ 143 (408)
..+++.|+|.++|++++++ + |+++.+.
T Consensus 113 ~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 113 NRNIVEALTKKYSVESIPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp CHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred chhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecc
Confidence 6789999999999999999 5 9776654
No 169
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.52 E-value=2.9e-14 Score=106.31 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=70.2
Q ss_pred cEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHH
Q 015368 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (408)
Q Consensus 75 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (408)
+.++.||++||++|+.+.|.+++++++++ +.+..||++++++++.+|+++ +|+++++.+|+.+ ..|..+.+.|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~~ 104 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIGA 104 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHHH
Confidence 67999999999999999999999999874 999999999999999999997 9999999999765 458889999988
Q ss_pred HH
Q 015368 155 WV 156 (408)
Q Consensus 155 ~i 156 (408)
||
T Consensus 105 ~L 106 (107)
T 2fgx_A 105 YL 106 (107)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 170
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.51 E-value=2.4e-14 Score=115.18 Aligned_cols=85 Identities=19% Similarity=0.243 Sum_probs=69.2
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhc--CCcEEEEEeCccc-------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------- 116 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~--~~v~~~~v~~~~~------------------- 116 (408)
+.++++ .+...-.++++++|+|||+||++|+.++|.+.+++++++ +++.++.|+++.+
T Consensus 14 l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 92 (146)
T 1o8x_A 14 LRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFA 92 (146)
T ss_dssp EEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGG
T ss_pred EEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccc
Confidence 334444 443222468999999999999999999999999999998 3899999998863
Q ss_pred -----HhHHHHcCCCcCcEEEEEe--CCeEeEEe
Q 015368 117 -----KDLAKEYNILAYPTLYLFV--AGVRQFQF 143 (408)
Q Consensus 117 -----~~~~~~~~i~~~Pt~~~~~--~g~~~~~~ 143 (408)
..++++|+|.++|++++++ +|+++.+.
T Consensus 93 ~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 93 QSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp GHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred hhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEec
Confidence 4789999999999999998 88766554
No 171
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.51 E-value=2.6e-14 Score=103.01 Aligned_cols=74 Identities=15% Similarity=0.138 Sum_probs=65.2
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHH
Q 015368 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (408)
Q Consensus 77 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (408)
++.||++||++|+.+.|.+++++.++ +..||++++++++++||++ +|++++ .+|+.+. |..+.+.|.++|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~~~~~~L~~~l 72 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WPFDAPRLRAWL 72 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SCCCHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CCCCHHHHHHHH
Confidence 78899999999999999999876543 6899999999999999998 999998 8886653 889999999999
Q ss_pred HhHh
Q 015368 157 REKM 160 (408)
Q Consensus 157 ~~~~ 160 (408)
.+.+
T Consensus 73 ~~~~ 76 (87)
T 1ttz_A 73 DAAP 76 (87)
T ss_dssp HTCC
T ss_pred HHHH
Confidence 8655
No 172
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.50 E-value=5.4e-14 Score=112.76 Aligned_cols=73 Identities=19% Similarity=0.297 Sum_probs=64.2
Q ss_pred cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhc--CCcEEEEEeCccc------------------------HhHHHHcC
Q 015368 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLK--GEADLVMVDAYLE------------------------KDLAKEYN 124 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~--~~v~~~~v~~~~~------------------------~~~~~~~~ 124 (408)
.++++++|+||++||++|+.++|.+.+++++++ .++.++.|+++.+ ..++++|+
T Consensus 26 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 26 LVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp GTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred hCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 367899999999999999999999999999998 4899999998863 46889999
Q ss_pred CCcCcEEEEEe--CCeEeEEe
Q 015368 125 ILAYPTLYLFV--AGVRQFQF 143 (408)
Q Consensus 125 i~~~Pt~~~~~--~g~~~~~~ 143 (408)
|.++|++++++ +|+++.+.
T Consensus 106 v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 106 VESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp CCSSSEEEEEETTTCCEEESC
T ss_pred CCCCCEEEEEECCCCeEEecc
Confidence 99999999999 88665544
No 173
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.49 E-value=9.7e-14 Score=119.49 Aligned_cols=106 Identities=18% Similarity=0.211 Sum_probs=82.9
Q ss_pred CcEEcChhhHHHHHcCCC-cEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCc--------------------
Q 015368 57 DVVSLNGKNFSEFMGKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY-------------------- 114 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~-~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~-------------------- 114 (408)
.+..++++.+...-..++ +++|.||++||++|+.++|.+.++++++++ ++.++.|+++
T Consensus 42 ~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~ 121 (218)
T 3u5r_E 42 VLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAY 121 (218)
T ss_dssp CEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHH
T ss_pred EeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHh
Confidence 444555555543333567 499999999999999999999999999987 6999999993
Q ss_pred ---------ccHhHHHHcCCCcCcEEEEEe-CCeEeEEee---------CCCCHHHHHHHHHhHhCC
Q 015368 115 ---------LEKDLAKEYNILAYPTLYLFV-AGVRQFQFF---------GERTRDVISAWVREKMTL 162 (408)
Q Consensus 115 ---------~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~---------g~~~~~~l~~~i~~~~~~ 162 (408)
.+..+++.|++.++|++++++ +|+++.+.. |..+.++|.+.|++.+..
T Consensus 122 ~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 122 GYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp TCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred CCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcC
Confidence 456789999999999999997 897654321 234578888888887743
No 174
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.49 E-value=1.2e-13 Score=113.01 Aligned_cols=90 Identities=16% Similarity=0.197 Sum_probs=74.0
Q ss_pred cEEcChhhHHHHHcCCCc-EEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCc--------------------
Q 015368 58 VVSLNGKNFSEFMGKNRN-VMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAY-------------------- 114 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~-~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~-------------------- 114 (408)
+..++++.+...-..+++ ++|.|| ++||++|+.++|.+.++++++++ ++.++.|++|
T Consensus 13 l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 92 (161)
T 3drn_A 13 GIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVS 92 (161)
T ss_dssp EEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEE
T ss_pred eecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEE
Confidence 344455444322235676 999999 99999999999999999999987 6999999987
Q ss_pred -ccHhHHHHcCCCc----CcEEEEEe-CCeEeEEeeCCC
Q 015368 115 -LEKDLAKEYNILA----YPTLYLFV-AGVRQFQFFGER 147 (408)
Q Consensus 115 -~~~~~~~~~~i~~----~Pt~~~~~-~g~~~~~~~g~~ 147 (408)
.+.++++.|++.+ +|++++++ +|+++..+.|..
T Consensus 93 d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 93 DPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp CTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSS
T ss_pred CCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCC
Confidence 4567899999999 99999998 999999999943
No 175
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.48 E-value=8.1e-14 Score=114.36 Aligned_cols=89 Identities=15% Similarity=0.213 Sum_probs=78.7
Q ss_pred CCCcEEEEEecCCChh-HHhhhHHHHHHHHHhcC-----CcEEEEEeCccc----------------------------H
Q 015368 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLKG-----EADLVMVDAYLE----------------------------K 117 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~-C~~~~p~~~~~~~~~~~-----~v~~~~v~~~~~----------------------------~ 117 (408)
.+++++|+||++||++ |+.++|.+.++++++++ ++.++.|++|.. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 6799999999999998 99999999999999863 899999998752 1
Q ss_pred hHHHHcCCCcCc---------------EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 118 DLAKEYNILAYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 118 ~~~~~~~i~~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
.+++.|++.+.| ++++++ +|+++.++.|..+.+++.+.|++.+
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 478899999999 888887 9999999999999999999998776
No 176
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.48 E-value=1e-13 Score=114.62 Aligned_cols=90 Identities=18% Similarity=0.248 Sum_probs=79.2
Q ss_pred CCCcEEEEEecCCChh-HHhhhHHHHHHHHHhc-----CCcEEEEEeCccc----------------------------H
Q 015368 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLK-----GEADLVMVDAYLE----------------------------K 117 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~-C~~~~p~~~~~~~~~~-----~~v~~~~v~~~~~----------------------------~ 117 (408)
.+++++|+||++||++ |+.++|.+.+++++++ .++.++.|+++.+ .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5799999999999998 9999999999999995 4899999998731 2
Q ss_pred hHHHHcCCCcCc---------------EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 118 DLAKEYNILAYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 118 ~~~~~~~i~~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
.+++.|++.+.| ++++++ +|+++.++.|..+.+++.+.|++.+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 578899999888 888887 99999999999999999999987763
No 177
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.48 E-value=1.7e-13 Score=115.39 Aligned_cols=105 Identities=15% Similarity=0.139 Sum_probs=82.7
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c----HhHH-HH-
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLA-KE- 122 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~-~~- 122 (408)
.+.+++++.+...-.++++++|+||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.+ ++
T Consensus 32 ~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~ 111 (190)
T 2vup_A 32 EVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKF 111 (190)
T ss_dssp CCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHH
T ss_pred EEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhc
Confidence 344455554443224689999999999999999999999999999987 69999999872 1 1222 22
Q ss_pred ----------------------------cCCCcCc------EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 123 ----------------------------YNILAYP------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 123 ----------------------------~~i~~~P------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+++.++| ++++++ +|+++.++.|..+.+.+.+.|++.+.
T Consensus 112 ~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 112 KAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 4788899 888887 99999999999999999999988763
No 178
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.47 E-value=1.2e-13 Score=113.99 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=78.6
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c----HhH-HHHc-
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDL-AKEY- 123 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~-~~~~- 123 (408)
+..++++.+...-.++++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . .+. .+++
T Consensus 16 l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 95 (169)
T 2v1m_A 16 VKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYG 95 (169)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHC
T ss_pred eecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcC
Confidence 33444444332223689999999999999999999999999999987 69999999863 1 122 1222
Q ss_pred ----------------------------C-----CCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 124 ----------------------------N-----ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 124 ----------------------------~-----i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+ |+++|++++++ +|+++.++.|..+.+.+.+.|++.+
T Consensus 96 ~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 96 VQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp CCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred CCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHh
Confidence 3 34458999997 9999999999999999999988765
No 179
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.46 E-value=8.4e-14 Score=115.18 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=78.9
Q ss_pred EEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c----HhHH------
Q 015368 59 VSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLA------ 120 (408)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~------ 120 (408)
.+++++.++..-.++++++|+|||+||++|+ ++|.+.++++++++ ++.++.|+++. . .+++
T Consensus 18 ~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~ 96 (171)
T 3cmi_A 18 VDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGV 96 (171)
T ss_dssp BBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CC
T ss_pred EcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCC
Confidence 3344444432223689999999999999999 99999999999987 69999998741 1 1122
Q ss_pred ------------------------HHcCCCcCc------EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 121 ------------------------KEYNILAYP------TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 121 ------------------------~~~~i~~~P------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+.|++.++| ++++++ +|+++.++.|..+.+.+.+.|++.+.
T Consensus 97 ~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 97 TFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred CceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 247888999 888887 99999999999999999999988763
No 180
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.46 E-value=5.4e-12 Score=111.09 Aligned_cols=197 Identities=16% Similarity=0.247 Sum_probs=145.0
Q ss_pred CcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 57 ~~~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
.+..| +.++++..+..+++++|-|+++|| ....+.|.++|+.+++++.|+.+. +.+++++|++.+ |++++|+
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~fk 79 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILFR 79 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEEC
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEEc
Confidence 56778 467788888888899999999984 457889999999998899999885 577999999997 9999998
Q ss_pred CC-------eEeEEe-eCCCCHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEEEEecCCCCc-------CHHHHH
Q 015368 136 AG-------VRQFQF-FGERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDLEGM-------ESEELA 200 (408)
Q Consensus 136 ~g-------~~~~~~-~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~-------~~~~~~ 200 (408)
.+ .....| .|.++.+.|.+||..+.-|.+.+++. +....+ ...+ .++.|+...... ....+.
T Consensus 80 ~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~-~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
T 2h8l_A 80 PSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLI-QGKD-LLIAYYDVDYEKNAKGSNYWRNRVM 156 (252)
T ss_dssp CGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECT-TTHHHH-SSSS-EEEEEECCBTTTBHHHHHHHHHHHH
T ss_pred chhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccc-ccHhhh-cCCC-eEEEEeecchhhcchhHHHHHHHHH
Confidence 42 245678 89999999999999999999999965 445555 3444 455555432221 123344
Q ss_pred HHh-ccCCc---eeEEEec---CHhHHhhcCCCC-CCCCCeEEEeecCCCcccccCCcCCHHH--HHHHHhcCC
Q 015368 201 AAS-KLHSD---VNFYQTT---SADVAEFFHIHP-KSKRPALIFLHLEAGKATPFRHQFTRLA--IANFVTHTK 264 (408)
Q Consensus 201 ~~a-~~~~~---~~f~~~~---~~~l~~~~~i~~-~~~~p~l~~~~~~~~~~~~y~g~~~~~~--i~~fi~~~~ 264 (408)
.+| +++++ +.|+.+. ...+.+.||+.. ....|.+++++.. +..+.+.++++.+. |.+|++...
T Consensus 157 ~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~-~~ky~~~~~~t~~~~~i~~F~~~~~ 229 (252)
T 2h8l_A 157 MVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAK-GEKFVMQEEFSRDGKALERFLQDYF 229 (252)
T ss_dssp HHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTT-SCEEECCSCCCTTSHHHHHHHHHHH
T ss_pred HHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCc-CcEecCCcccCcchHHHHHHHHHHH
Confidence 566 55555 8888763 345778899931 1258999988753 34455778888888 999998643
No 181
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.46 E-value=1.1e-13 Score=114.19 Aligned_cols=104 Identities=10% Similarity=0.120 Sum_probs=80.9
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c----HhHHH-Hc-
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAK-EY- 123 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~-~~- 123 (408)
+.+++++.++..-.++++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.++ ++
T Consensus 17 l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
T 2p5q_A 17 VKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFK 96 (170)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTC
T ss_pred EEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcC
Confidence 33444444432223689999999999999999999999999999987 69999999862 1 22333 33
Q ss_pred ----------------------------CC--CcCc---EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 124 ----------------------------NI--LAYP---TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 124 ----------------------------~i--~~~P---t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
++ .++| ++++++ +|+++.++.|..+.+.+.+.|++.+.
T Consensus 97 ~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 97 SEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 6678 888997 99999999999999999999988764
No 182
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.19 E-value=5.7e-15 Score=120.73 Aligned_cols=102 Identities=16% Similarity=0.109 Sum_probs=77.6
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHH-HHHHhc-C-CcEEEEEeCcccHhHHHHc-----------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAA-AAKMLK-G-EADLVMVDAYLEKDLAKEY----------- 123 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~-~~~~~~-~-~v~~~~v~~~~~~~~~~~~----------- 123 (408)
+..++++.++..-.++++++|.||++||++|+.++|.+.+ +++.++ + ++.++.|++++.++.+++|
T Consensus 18 l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 97 (159)
T 2ls5_A 18 ITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLG 97 (159)
Confidence 4445555555333467899999999999999999999998 888887 3 8999999988765544443
Q ss_pred -----------C--CCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 124 -----------N--ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 124 -----------~--i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+ +.++|++++++ +|+++.++.| .+.+++.+++++..
T Consensus 98 ~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 98 LDPGADIFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQIN 147 (159)
Confidence 3 67799999996 9988888877 46667777765543
No 183
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.44 E-value=3.4e-13 Score=113.17 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=81.7
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c-HhHHH----H-
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E-KDLAK----E- 122 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~-~~~~~----~- 122 (408)
.+.+++++.+...-.++|+++|+|||+||++|+.++|.+.++++++++ ++.++.|+++. . ..+.+ +
T Consensus 30 ~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~ 109 (187)
T 3dwv_A 30 EVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKF 109 (187)
T ss_dssp CCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCC
T ss_pred EEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhcc
Confidence 445556655543334789999999999999999999999999999987 69999998762 1 11111 1
Q ss_pred -------------------------------cCCCcCc---EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 123 -------------------------------YNILAYP---TLYLFV-AGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 123 -------------------------------~~i~~~P---t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+++.++| ++++++ +|+++.++.|..+.+.+.+.|++.+.
T Consensus 110 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 110 KAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred CCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 2344567 999997 99999999999999999999988874
No 184
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.44 E-value=1.2e-13 Score=115.25 Aligned_cols=103 Identities=13% Similarity=0.091 Sum_probs=79.2
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c----HhHHHH-c-
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKE-Y- 123 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~~-~- 123 (408)
+..++++.+...-.++++++|+||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.+++ +
T Consensus 34 l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~ 113 (181)
T 2p31_A 34 AVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYS 113 (181)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHC
T ss_pred eecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcC
Confidence 33444444432223689999999999999999999999999999987 69999999863 1 123333 2
Q ss_pred ----------------------CCCcCc-------EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 124 ----------------------NILAYP-------TLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 124 ----------------------~i~~~P-------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++.++| ++++++ +|+++.++.|..+.+++.+.|++.+
T Consensus 114 ~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 114 VSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp CCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred CCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 244678 888887 9999999999999999999998754
No 185
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.42 E-value=2.7e-13 Score=115.59 Aligned_cols=90 Identities=8% Similarity=-0.021 Sum_probs=73.6
Q ss_pred cCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc--------cHh---HHH------HcC--------
Q 015368 71 GKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------EKD---LAK------EYN-------- 124 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~--------~~~---~~~------~~~-------- 124 (408)
.++++++|+|||+||++|++++|.++++++++++ ++.++.|++++ ..+ .++ +++
T Consensus 45 ~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d 124 (208)
T 2f8a_A 45 LRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEK 124 (208)
T ss_dssp GTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred cCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEE
Confidence 3689999999999999999999999999999987 69999999861 122 222 333
Q ss_pred ---------------------------------------------CCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHh
Q 015368 125 ---------------------------------------------ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVRE 158 (408)
Q Consensus 125 ---------------------------------------------i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~ 158 (408)
|.+.|++++++ +|+++.++.|..+.++|.+.|++
T Consensus 125 ~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ 204 (208)
T 2f8a_A 125 CEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 204 (208)
T ss_dssp CCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred eecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 33348899998 99999999999999999998887
Q ss_pred Hh
Q 015368 159 KM 160 (408)
Q Consensus 159 ~~ 160 (408)
.+
T Consensus 205 ll 206 (208)
T 2f8a_A 205 LL 206 (208)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 186
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.42 E-value=1.5e-13 Score=113.69 Aligned_cols=88 Identities=14% Similarity=0.200 Sum_probs=76.0
Q ss_pred CCCcEEEEEecCCChh-HHhhhHHHHHHHHHhcC----CcEEEEEeCccc----------------------------Hh
Q 015368 72 KNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLKG----EADLVMVDAYLE----------------------------KD 118 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~-C~~~~p~~~~~~~~~~~----~v~~~~v~~~~~----------------------------~~ 118 (408)
++++++|+||++||++ |+.++|.+.++++++++ ++.++.|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 6799999999999997 99999999999999874 699999998743 35
Q ss_pred HHHHcCC---------------CcCcEEEEEeCCeEeEEeeCCC--CHHHHHHHHHhH
Q 015368 119 LAKEYNI---------------LAYPTLYLFVAGVRQFQFFGER--TRDVISAWVREK 159 (408)
Q Consensus 119 ~~~~~~i---------------~~~Pt~~~~~~g~~~~~~~g~~--~~~~l~~~i~~~ 159 (408)
+++.|++ .++|+++++++|+++.++.|.. +.+++.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 6666664 5789999999998889999988 899999998764
No 187
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.41 E-value=5.1e-13 Score=109.09 Aligned_cols=100 Identities=7% Similarity=0.135 Sum_probs=77.7
Q ss_pred EEcChhhHHHHHcCCC-cEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc--------------------
Q 015368 59 VSLNGKNFSEFMGKNR-NVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------- 115 (408)
Q Consensus 59 ~~l~~~~~~~~~~~~~-~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------------------- 115 (408)
...+++.+...-..++ +++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++.
T Consensus 21 ~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d 100 (160)
T 1xvw_A 21 RDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSD 100 (160)
T ss_dssp ECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEEC
T ss_pred EcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEec
Confidence 3344443332222566 9999998 99999999999999999999976 79999999864
Q ss_pred ---cHhHHHHcCCC----cCc--EEEEEe-CCeEeEEeeCCCC----HHHHHHHHHh
Q 015368 116 ---EKDLAKEYNIL----AYP--TLYLFV-AGVRQFQFFGERT----RDVISAWVRE 158 (408)
Q Consensus 116 ---~~~~~~~~~i~----~~P--t~~~~~-~g~~~~~~~g~~~----~~~l~~~i~~ 158 (408)
+..+++.|++. ++| ++++++ +|+++.++.|..+ .+++.+.+++
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 101 FWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred CCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 56789999999 999 888887 9999888988753 4555555543
No 188
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.41 E-value=6e-13 Score=110.97 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=80.1
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c----HhHHHH-c
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKE-Y 123 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~~-~ 123 (408)
.+.+++++.+...-.++++++|+|||+||++|+.++|.+.++++++++ ++.++.|+++. . .+++++ +
T Consensus 22 ~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~ 101 (180)
T 3kij_A 22 EVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNY 101 (180)
T ss_dssp EEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHH
T ss_pred EEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhc
Confidence 344555555543334789999999999999999999999999999988 69999998764 2 234555 4
Q ss_pred CCC--------------------------cCcE----EEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 124 NIL--------------------------AYPT----LYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 124 ~i~--------------------------~~Pt----~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++. ++|+ +++++ +|+++.++.|..+.+.+.+.|.+.+
T Consensus 102 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 102 GVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp CCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred CCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 432 2676 77887 9999999999998888887777665
No 189
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.40 E-value=3.3e-13 Score=112.88 Aligned_cols=102 Identities=13% Similarity=0.020 Sum_probs=76.8
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c----HhHHHHc--
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKEY-- 123 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~~~-- 123 (408)
+..++++.+...-.++++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . .+.++++
T Consensus 32 l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~ 111 (183)
T 2obi_A 32 AKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNV 111 (183)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTC
T ss_pred EEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCC
Confidence 34445544432223689999999999999999999999999999987 69999998862 1 1122222
Q ss_pred -----------------------------C-----CCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhH
Q 015368 124 -----------------------------N-----ILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 124 -----------------------------~-----i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
+ |+.+|++++++ +|+++.++.|..+.++|.++|++.
T Consensus 112 ~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 112 KFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp CSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred CceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 3 33359999997 999999999998888888777654
No 190
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.40 E-value=3.2e-13 Score=113.41 Aligned_cols=89 Identities=16% Similarity=0.252 Sum_probs=78.1
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------------------------cHhHHHHcC
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------------------------~~~~~~~~~ 124 (408)
.+++++|+|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 5799999999 99999999999999999999976 79999999874 346888999
Q ss_pred CC------cCcEEEEEe-CCeEeEEeeCCC----CHHHHHHHHHhHh
Q 015368 125 IL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (408)
Q Consensus 125 i~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (408)
+. ++|++++++ +|+++.++.|.. +.+++.+.|++..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 999999997 998888888864 6788888887765
No 191
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.40 E-value=4e-13 Score=112.57 Aligned_cols=102 Identities=13% Similarity=0.004 Sum_probs=77.0
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------c----HhHHHHcCC
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------E----KDLAKEYNI 125 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------~----~~~~~~~~i 125 (408)
+.+++++.++..-.++++++|.||++||++|+.++|.+.++++++++ ++.++.|+++. . .++++++++
T Consensus 34 l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~ 113 (185)
T 2gs3_A 34 AKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNV 113 (185)
T ss_dssp EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTC
T ss_pred eEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCC
Confidence 33444444432223679999999999999999999999999999987 69999999863 1 223333322
Q ss_pred -------------------------------C-----cCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhH
Q 015368 126 -------------------------------L-----AYPTLYLFV-AGVRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 126 -------------------------------~-----~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
. .+|++++++ +|+++.++.|..+.+++.+.|++.
T Consensus 114 ~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 114 KFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp CSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred CCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 2 258999997 999999999998888888887764
No 192
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.10 E-value=2.5e-14 Score=114.56 Aligned_cols=86 Identities=19% Similarity=0.271 Sum_probs=68.3
Q ss_pred cEEcChhhHHHHH-cCCC-cEEEEEecCCChhHHhhhHHHHHHHHHhc---CCcEEEEEeCccc----------------
Q 015368 58 VVSLNGKNFSEFM-GKNR-NVMVMFYANWCYWSKKLAPEFAAAAKMLK---GEADLVMVDAYLE---------------- 116 (408)
Q Consensus 58 ~~~l~~~~~~~~~-~~~~-~~~v~f~a~wC~~C~~~~p~~~~~~~~~~---~~v~~~~v~~~~~---------------- 116 (408)
+..++++.++..- .+++ +++|+||++||++|+.+.|.+.+++++++ .++.++.|++++.
T Consensus 9 l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~ 88 (143)
T 2lus_A 9 LVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWL 88 (143)
Confidence 3344555554322 3566 99999999999999999999999999983 3788888888755
Q ss_pred ---------HhHHHHcCCCcCcEEEEEe-CCeEeEEe
Q 015368 117 ---------KDLAKEYNILAYPTLYLFV-AGVRQFQF 143 (408)
Q Consensus 117 ---------~~~~~~~~i~~~Pt~~~~~-~g~~~~~~ 143 (408)
..++++|+|.++|++++++ +|+++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 89 AIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMN 125 (143)
Confidence 3688999999999999998 89766553
No 193
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.39 E-value=3.4e-13 Score=114.36 Aligned_cols=89 Identities=13% Similarity=0.247 Sum_probs=78.2
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc----------------------------cHhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (408)
++++++|+|| ++||++|+.++|.+.++++++++ ++.++.|+++. +.++++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 5789999999 99999999999999999999976 69999999874 357889
Q ss_pred HcCCC-----cCcEEEEEe-CCeEeEEeeCCC----CHHHHHHHHHhHh
Q 015368 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (408)
Q Consensus 122 ~~~i~-----~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (408)
.|++. ++|++++++ +|+++.++.|.. +.+++.+.|++..
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 999999998 998888888865 6788888887665
No 194
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.39 E-value=7.4e-13 Score=111.93 Aligned_cols=90 Identities=12% Similarity=0.181 Sum_probs=79.6
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------------------------cHhHHHHcC
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------------EKDLAKEYN 124 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------------------------~~~~~~~~~ 124 (408)
.+++++|+|| ++||++|+.++|.+.++++++++ ++.++.|+++. +..+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 5789999999 99999999999999999999987 79999999874 346788999
Q ss_pred CC-----cCcEEEEEe-CCeEeEEeeCCC----CHHHHHHHHHhHhC
Q 015368 125 IL-----AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKMT 161 (408)
Q Consensus 125 i~-----~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~~ 161 (408)
+. ++|++++++ +|+++.++.|.. +.+++.+.|++...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 99 999999997 998888888765 78999999988764
No 195
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.39 E-value=1.8e-12 Score=103.89 Aligned_cols=90 Identities=10% Similarity=0.080 Sum_probs=74.3
Q ss_pred HcCCCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeCcc--cHhHHHHcCCCcCcEEEEEe-C-CeEeEE
Q 015368 70 MGKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYL--EKDLAKEYNILAYPTLYLFV-A-GVRQFQ 142 (408)
Q Consensus 70 ~~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~-~-g~~~~~ 142 (408)
..++|+++|+||++||.+|+.+.... .++.+.++.++.++++|.+. ...++++|++.++|++++++ + |+.+..
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 35689999999999999999997655 55555555589999999865 34688999999999999998 5 767777
Q ss_pred eeCCCCHHHHHHHHHhHh
Q 015368 143 FFGERTRDVISAWVREKM 160 (408)
Q Consensus 143 ~~g~~~~~~l~~~i~~~~ 160 (408)
+.| .+++++.++|++.+
T Consensus 119 ~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 119 WHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp ESS-CCHHHHHHHHHHHH
T ss_pred cCC-CCHHHHHHHHHHHH
Confidence 666 89999999988776
No 196
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.38 E-value=8e-11 Score=103.36 Aligned_cols=196 Identities=14% Similarity=0.113 Sum_probs=143.1
Q ss_pred CcEEcC-hhhHHHHHcC-CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEE
Q 015368 57 DVVSLN-GKNFSEFMGK-NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLF 134 (408)
Q Consensus 57 ~~~~l~-~~~~~~~~~~-~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~ 134 (408)
.+..|+ .++++..+.. +++++|-|++++| ....+.|.++|+.+++++.|+.+. +.++++++++.+ |++++|
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~-p~ivlf 79 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL-GKLVLM 79 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS-SEEEEE
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC-CeEEEE
Confidence 566774 4788888877 8899999999985 567889999999998899999875 678999999998 999999
Q ss_pred eCC-------eEeEEee--CCCCHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEEEEecCC-CC--c-----CHH
Q 015368 135 VAG-------VRQFQFF--GERTRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVLGFLHDL-EG--M-----ESE 197 (408)
Q Consensus 135 ~~g-------~~~~~~~--g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~-~~--~-----~~~ 197 (408)
+.+ .....|. |..+.+.|.+||..+..|.+.+++.. ....... ..+.+++|+... .. . ...
T Consensus 80 k~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~-n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~ 157 (250)
T 3ec3_A 80 QPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTS-NDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRN 157 (250)
T ss_dssp CCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTT-THHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHH
T ss_pred ecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCcc-chhhhhc-cCccEEEEEecccccccchhHHHHHH
Confidence 842 2346778 57999999999999999999999654 4444444 455555565422 21 1 234
Q ss_pred HHHHHh-ccCCceeEEEec---CHhHHhhcCCCCCCCC-CeEEEeecCCCcccccC-CcCCHHHHHHHHhcCC
Q 015368 198 ELAAAS-KLHSDVNFYQTT---SADVAEFFHIHPKSKR-PALIFLHLEAGKATPFR-HQFTRLAIANFVTHTK 264 (408)
Q Consensus 198 ~~~~~a-~~~~~~~f~~~~---~~~l~~~~~i~~~~~~-p~l~~~~~~~~~~~~y~-g~~~~~~i~~fi~~~~ 264 (408)
.+..+| +++ ++.|+.+. .....+.||+... +. |.++++... +..+.+. ++++.+.|.+|++...
T Consensus 158 ~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~-~~~p~~~~~~~~-~~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 158 KVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSES-GGDVNAAILDES-GKKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSC-SCSCEEEEECTT-SCEEECCCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCcc-CCCcEEEEEcCC-CceecCCcccCCHHHHHHHHHHHH
Confidence 566777 566 88888763 2346778898742 23 577766643 3445555 6789999999998643
No 197
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.37 E-value=1.8e-12 Score=114.54 Aligned_cols=82 Identities=20% Similarity=0.301 Sum_probs=65.1
Q ss_pred hHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc------ccHhHHHHcCCCcCcEEEEEeCCe
Q 015368 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------LEKDLAKEYNILAYPTLYLFVAGV 138 (408)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~------~~~~~~~~~~i~~~Pt~~~~~~g~ 138 (408)
.+.+.+.+. .+|+|||+||+||+++.|.|++++++++ .|||+ +++++|++++|+++||+++ +|+
T Consensus 191 ~la~~l~~~--~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~ 260 (291)
T 3kp9_A 191 GLAAHLRQI--GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR 260 (291)
T ss_dssp HHHHHHHHT--TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE
T ss_pred HHHHHhCCC--CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE
Confidence 444444333 3689999999999999999999987653 45554 3789999999999999554 885
Q ss_pred EeEEeeCCCCHHHHHHHHHhH
Q 015368 139 RQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 139 ~~~~~~g~~~~~~l~~~i~~~ 159 (408)
++.|.++.+++.+|+...
T Consensus 261 ---~~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 261 ---TYTGVRSLEALAVASGYP 278 (291)
T ss_dssp ---EEESCCCHHHHHHHTCCC
T ss_pred ---EecCCCCHHHHHHHHCCC
Confidence 499999999999998543
No 198
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.35 E-value=1.6e-11 Score=114.91 Aligned_cols=199 Identities=18% Similarity=0.215 Sum_probs=133.1
Q ss_pred CcccccChhHHHHHhccCCeEEEEEecCCCCcC---HHHHHHHh-cc------CCceeEEEe---cCHhHHhhcCCCCCC
Q 015368 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGME---SEELAAAS-KL------HSDVNFYQT---TSADVAEFFHIHPKS 229 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~---~~~~~~~a-~~------~~~~~f~~~---~~~~l~~~~~i~~~~ 229 (408)
.+..+ +.++++..+..++.++|.|+++||.++ .+.+..++ .+ .+.+.|+.+ .+.++++++++.
T Consensus 6 ~v~~l-~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~--- 81 (382)
T 2r2j_A 6 EITSL-DTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRIS--- 81 (382)
T ss_dssp --CBC-CTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCC---
T ss_pred ceEEC-CHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCC---
Confidence 35555 457788888888999999999999985 44566666 44 345888876 467899999999
Q ss_pred CCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCCCCceEeecc-ccccccccCCccEEEEEeeCCCchHHHHHHHHHHH
Q 015368 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPLVVTLTI-HNAQFVFQDPRKQLWLFAPAYGSDKVILTFEEVAK 308 (408)
Q Consensus 230 ~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~v~~lt~-~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~vA~ 308 (408)
++|++++|+.+......|.|..+.+.|.+|+....-|.+..++. +.+.. +....+.++.|....+ ......|.++|.
T Consensus 82 ~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~-~~~~~~f~~~A~ 159 (382)
T 2r2j_A 82 KYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKD-SDNYRVFERVAN 159 (382)
T ss_dssp EESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSS-SHHHHHHHHHHH
T ss_pred cCCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCC-ChhHHHHHHHHH
Confidence 69999999865322226999999999999999988888888864 45666 4444455555554433 345678999999
Q ss_pred HhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEcc--CCccccCCCCC-ChHHHHHHHHHHhcCcc
Q 015368 309 ALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR--DAKKYVLNGEL-TLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 309 ~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~--~~~~y~~~~~~-~~~~i~~Fi~~~~~gk~ 380 (408)
.++++ +.|+.+.. .+.+.++++. .| +++... +.....|.|.+ +.+.|.+||+...-..+
T Consensus 160 ~~~~~---~~F~~~~~-------~~~~~~~v~~--~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v 221 (382)
T 2r2j_A 160 ILHDD---CAFLSAFG-------DVSKPERYSG--DN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLV 221 (382)
T ss_dssp HHTTT---CEEEEEES-------CC----------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSS
T ss_pred Hhhcc---ceEEEEeh-------hhHHhhCCCC--Cc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCce
Confidence 99998 99988874 1346677743 45 555544 23456688888 89999999998765544
No 199
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.34 E-value=3.9e-13 Score=103.42 Aligned_cols=87 Identities=15% Similarity=0.228 Sum_probs=65.9
Q ss_pred hHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc-----HhHHHHcCCCcCcEEEEEeCCeE
Q 015368 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-----KDLAKEYNILAYPTLYLFVAGVR 139 (408)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~-----~~~~~~~~i~~~Pt~~~~~~g~~ 139 (408)
.++..+. ++++++ ||++||++|+.+.|.+++++. .+.++.||.+.+ ..++++|++.++|++ |.+|+.
T Consensus 12 ~~~~~~~-~~~vv~-f~a~~C~~C~~~~~~l~~~~~----~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~ 83 (116)
T 2e7p_A 12 KAKELAS-SAPVVV-FSKTYCGYCNRVKQLLTQVGA----SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQ 83 (116)
T ss_dssp HHHHHHT-SSSEEE-EECTTCHHHHHHHHHHHHHTC----CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred HHHHHHc-CCCEEE-EECCCChhHHHHHHHHHHcCC----CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 3444554 456666 999999999999999988754 356666666655 569999999999999 558988
Q ss_pred eEEeeCCC---CHHHHHHHHHhH
Q 015368 140 QFQFFGER---TRDVISAWVREK 159 (408)
Q Consensus 140 ~~~~~g~~---~~~~l~~~i~~~ 159 (408)
+..+.|.. +.+.|.++|.+.
T Consensus 84 v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 84 IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EECHHHHHHHHHTTCHHHHHHHT
T ss_pred ECChHHHHHHHhCChHHHHHHHc
Confidence 77777655 666788888764
No 200
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.33 E-value=3.8e-12 Score=107.72 Aligned_cols=89 Identities=20% Similarity=0.360 Sum_probs=76.5
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc----------------------------cHhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (408)
.+++++|.|| ++||++|..++|.+.++++++++ ++.++.|+++. +.++++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 6789999999 99999999999999999999976 79999999874 236889
Q ss_pred HcCCC------cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
.|++. ++|++++++ +|+++..+.|. .+.+++.+.|+...
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 99998 899999997 89888888774 45788888887653
No 201
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.33 E-value=7.4e-12 Score=102.95 Aligned_cols=102 Identities=10% Similarity=0.117 Sum_probs=79.4
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCC-ChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc---------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANW-CYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------------------- 115 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~w-C~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~--------------------- 115 (408)
+...+++.++..-..+++++|.||++| |++|+.++|.+.++++++ .++.++.|++|.
T Consensus 29 l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d 107 (167)
T 2jsy_A 29 VLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSD 107 (167)
T ss_dssp EEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEG
T ss_pred EECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeC
Confidence 444555544422236789999999999 999999999999999999 689999998763
Q ss_pred --cHhHHHHcCCCc------CcEEEEEe-CCeEeEEeeCC-----CCHHHHHHHHHhHh
Q 015368 116 --EKDLAKEYNILA------YPTLYLFV-AGVRQFQFFGE-----RTRDVISAWVREKM 160 (408)
Q Consensus 116 --~~~~~~~~~i~~------~Pt~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~~~ 160 (408)
+.++++.|++.. .|++++++ +|+++.++.|. .+.+++.+.|++.+
T Consensus 108 ~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 108 HRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp GGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred CchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 346788899987 49999998 99888888763 24477877777653
No 202
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.30 E-value=1.1e-11 Score=105.67 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=80.0
Q ss_pred CcEEcC-hhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc--------c---HhHHH--
Q 015368 57 DVVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------E---KDLAK-- 121 (408)
Q Consensus 57 ~~~~l~-~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~--------~---~~~~~-- 121 (408)
.+.+++ ++.+...--++|+++|+|||+||++|+ ++|.+++++++|++ ++.++.|+|++ . .++++
T Consensus 39 ~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~ 117 (215)
T 2i3y_A 39 EAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYV 117 (215)
T ss_dssp EEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHT
T ss_pred EeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHHHhc
Confidence 344555 554443334789999999999999999 89999999999976 79999999862 1 33455
Q ss_pred ----HcCCC-------------------------------------------------cCcEEEEEe-CCeEeEEeeCCC
Q 015368 122 ----EYNIL-------------------------------------------------AYPTLYLFV-AGVRQFQFFGER 147 (408)
Q Consensus 122 ----~~~i~-------------------------------------------------~~Pt~~~~~-~g~~~~~~~g~~ 147 (408)
++++. ..|+.++++ +|+++.+|.|..
T Consensus 118 ~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~ 197 (215)
T 2i3y_A 118 RPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRA 197 (215)
T ss_dssp SSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTS
T ss_pred cchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCC
Confidence 55431 016889998 999999999999
Q ss_pred CHHHHHHHHHhHhC
Q 015368 148 TRDVISAWVREKMT 161 (408)
Q Consensus 148 ~~~~l~~~i~~~~~ 161 (408)
+.++|.+.|++.+.
T Consensus 198 ~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 198 TVSSVKTDILAYLK 211 (215)
T ss_dssp CHHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999987763
No 203
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.29 E-value=5.5e-12 Score=107.17 Aligned_cols=89 Identities=17% Similarity=0.268 Sum_probs=76.5
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc----------------------------cHhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (408)
.+++++|.|| ++||++|..++|.+.++++++++ ++.++.|++|. +.++++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 5789999999 99999999999999999999976 79999999874 346888
Q ss_pred HcCCC------cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
.|++. ++|++++++ +|++..++.|. .+.+++.+.|++..
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 99999 999999997 99888887764 45688888887654
No 204
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.29 E-value=3.8e-12 Score=109.54 Aligned_cols=89 Identities=18% Similarity=0.354 Sum_probs=76.3
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc----------------------------cHhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (408)
.+++++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++. +.++++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 5699999999 99999999999999999999975 79999998864 346889
Q ss_pred HcCCC------cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
.|++. ++|++++++ +|+++.++.|. .+.+++.+.|+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 99999 999999997 99888877765 46688888887655
No 205
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.29 E-value=6e-11 Score=103.67 Aligned_cols=143 Identities=12% Similarity=0.121 Sum_probs=98.0
Q ss_pred CCCcEEEEEe-cCCChhHH-hhhHHHHHHHHHhcC-Cc-EEEEEeCcc----------------------cHhHHHHcCC
Q 015368 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKMLKG-EA-DLVMVDAYL----------------------EKDLAKEYNI 125 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~-~~~p~~~~~~~~~~~-~v-~~~~v~~~~----------------------~~~~~~~~~i 125 (408)
++++++|+|| ++||++|. .++|.+.++++++++ ++ .++.|+.+. +..+++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 6789999999 99999999 999999999999875 79 899998763 2346778887
Q ss_pred C-----------cCcEEEEEeCCeEeEEeeCCC---------CHHHHHHHHHhHhCCCcccccChhHHHHHhccCCeEEE
Q 015368 126 L-----------AYPTLYLFVAGVRQFQFFGER---------TRDVISAWVREKMTLGTYSITTTDEAERILTVESKLVL 185 (408)
Q Consensus 126 ~-----------~~Pt~~~~~~g~~~~~~~g~~---------~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~vi 185 (408)
. ..|+++++++|++...+.|.. +.+++.+.+.... + ....++
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~----------------i--~~~~i~ 173 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH----------------Q--VQESIS 173 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS----------------C--CCCCEE
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc----------------c--ccceEE
Confidence 5 348877779998888887753 4455544443211 1 122355
Q ss_pred EEecCCCCcCHHHHHHHhccCCceeEEEec-C---HhHHhhcCCCCCCCCCeEE
Q 015368 186 GFLHDLEGMESEELAAASKLHSDVNFYQTT-S---ADVAEFFHIHPKSKRPALI 235 (408)
Q Consensus 186 ~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~-~---~~l~~~~~i~~~~~~p~l~ 235 (408)
+|..++|..+.+.-..+....-.+....+. + .++.+.++.. +.|.++
T Consensus 174 ly~~~~Cp~C~~a~~~L~~~~i~~~~~~i~~~~~~~~l~~~~g~~---~vP~~~ 224 (241)
T 1nm3_A 174 IFTKPGCPFCAKAKQLLHDKGLSFEEIILGHDATIVSVRAVSGRT---TVPQVF 224 (241)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCCCEEEETTTTCCHHHHHHHTCCS---SSCEEE
T ss_pred EEECCCChHHHHHHHHHHHcCCceEEEECCCchHHHHHHHHhCCC---CcCEEE
Confidence 688889988776655555433333333332 1 3466667765 478876
No 206
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.29 E-value=7.1e-12 Score=107.18 Aligned_cols=89 Identities=18% Similarity=0.313 Sum_probs=75.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc----------------------------cHhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (408)
++++++|.|| ++||++|+.++|.+.++++++++ ++.++.|++|. +.++++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 6789999999 99999999999999999999974 79999998764 346889
Q ss_pred HcCCC-----cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 122 ~~~i~-----~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
.|++. .+|++++++ +|+++..+.|. .+.+++.+.|+...
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99999 899999998 99888887764 35788888887654
No 207
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.29 E-value=4.4e-12 Score=106.84 Aligned_cols=89 Identities=20% Similarity=0.320 Sum_probs=75.5
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc----------------------------cHhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (408)
++++++|.|| ++||++|+.++|.+.++++++++ ++.++.|+++. +.++++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 6789999999 99999999999999999999964 79999998863 246889
Q ss_pred HcCCC-----cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 122 EYNIL-----AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 122 ~~~i~-----~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
.|++. ++|++++++ +|+++..+.|. .+.+++.+.|+...
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999 899999997 99888888774 34777877776554
No 208
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.28 E-value=8.5e-12 Score=103.27 Aligned_cols=103 Identities=18% Similarity=0.180 Sum_probs=77.5
Q ss_pred EEcChhhHHHHHcCCCcEEEEEecCCCh-hHHhhhHHHHHHHHHhcC---CcEEEEEeCcc---c---------------
Q 015368 59 VSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLKG---EADLVMVDAYL---E--------------- 116 (408)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~~v~f~a~wC~-~C~~~~p~~~~~~~~~~~---~v~~~~v~~~~---~--------------- 116 (408)
..++++.++..-..+++++|+||++||+ +|..++|.+.++++++++ ++.++.|+++. .
T Consensus 19 ~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~ 98 (174)
T 1xzo_A 19 QNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSF 98 (174)
T ss_dssp ECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCG
T ss_pred EcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3344443332223689999999999999 999999999999999875 39999999872 1
Q ss_pred ----------HhHHHH----------------cCCCcCcEEEEEe-CCeEeEEeeCCC--CHHHHHHHHHhHhC
Q 015368 117 ----------KDLAKE----------------YNILAYPTLYLFV-AGVRQFQFFGER--TRDVISAWVREKMT 161 (408)
Q Consensus 117 ----------~~~~~~----------------~~i~~~Pt~~~~~-~g~~~~~~~g~~--~~~~l~~~i~~~~~ 161 (408)
.++++. +++.+.|++++++ +|+++.++.|.. +.+++.+.|++.+.
T Consensus 99 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 99 DNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp GGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred cceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 112222 2456789999998 999999999976 58899999987763
No 209
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.28 E-value=9.6e-12 Score=105.44 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=77.8
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCChh-HHhhhHHHHHHHHHhc----CCcEEEEEeCcc----------------
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCYW-SKKLAPEFAAAAKMLK----GEADLVMVDAYL---------------- 115 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~~-C~~~~p~~~~~~~~~~----~~v~~~~v~~~~---------------- 115 (408)
.+.+.+++.++..-..+++++|+||++||++ |..++|.+.+++++++ +++.++.|++|.
T Consensus 25 ~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~ 104 (200)
T 2b7k_A 25 HLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFH 104 (200)
T ss_dssp EEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSC
T ss_pred EEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcC
Confidence 3444555544422236899999999999997 9999999999888775 379999998873
Q ss_pred ------------cHhHHHHcCCC-cCc---------------EEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 116 ------------EKDLAKEYNIL-AYP---------------TLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 116 ------------~~~~~~~~~i~-~~P---------------t~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
...+++.||+. +.| ++++++ +|+++..+.|..+.+.+.+.|.+.+
T Consensus 105 ~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l 178 (200)
T 2b7k_A 105 PSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHV 178 (200)
T ss_dssp TTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHH
T ss_pred CCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 13577888887 444 778887 9999889999888888888777766
No 210
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.28 E-value=1e-11 Score=95.80 Aligned_cols=103 Identities=16% Similarity=0.244 Sum_probs=91.7
Q ss_pred hHhCCCccc--ccChhHHHHHhccCCeEEEEEecCCCCcCHHHHHHHhccCCceeEEEecCHhHHhhcCCCCCCCCCeEE
Q 015368 158 EKMTLGTYS--ITTTDEAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALI 235 (408)
Q Consensus 158 ~~~~~~~~~--i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~ 235 (408)
+..+|+... |++.++++.+++.+++++|+||.+++++.++.|..+|....++.|+.+.+.+++++++++ .|+++
T Consensus 15 kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~----~~~vv 90 (124)
T 2l4c_A 15 DGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNIT----GNTIC 90 (124)
T ss_dssp CCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEEEECCHHHHHHTTCC----SSCEE
T ss_pred hccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhCCCceEEEEChHHHHHHcCCC----CCeEE
Confidence 556777655 999999999999999999999999999999999999943499999999999999999998 49999
Q ss_pred EeecCCCcccccCC----cCCHHHHHHHHhcCC
Q 015368 236 FLHLEAGKATPFRH----QFTRLAIANFVTHTK 264 (408)
Q Consensus 236 ~~~~~~~~~~~y~g----~~~~~~i~~fi~~~~ 264 (408)
+|++.++....|.| +++.++|.+||..++
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~ 123 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINS 123 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHHC
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHhc
Confidence 99998778888986 789999999998765
No 211
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.27 E-value=1e-11 Score=101.63 Aligned_cols=101 Identities=12% Similarity=0.165 Sum_probs=75.9
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEec-CCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc--------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-------------------- 115 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-------------------- 115 (408)
+...+++.+...-..+++++|.||+ +||++|..++|.+.++++++++ ++.++.|++|.
T Consensus 20 l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d 99 (163)
T 3gkn_A 20 LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSD 99 (163)
T ss_dssp EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEEC
T ss_pred ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEEC
Confidence 3334444443222357899999998 9999999999999999999976 79999998863
Q ss_pred -cHhHHHHcCCCc------------CcEEEEEe-CCeEeEEeeCCCC---HHHHHHHHHh
Q 015368 116 -EKDLAKEYNILA------------YPTLYLFV-AGVRQFQFFGERT---RDVISAWVRE 158 (408)
Q Consensus 116 -~~~~~~~~~i~~------------~Pt~~~~~-~g~~~~~~~g~~~---~~~l~~~i~~ 158 (408)
+.++++.|++.. .|++++++ +|+++..+.|... .+++.+.+++
T Consensus 100 ~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 100 GDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp TTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHH
T ss_pred CcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHH
Confidence 235678899887 99999998 9988888865433 3555555544
No 212
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.26 E-value=1e-11 Score=92.39 Aligned_cols=80 Identities=13% Similarity=0.146 Sum_probs=66.7
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc--ccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCH
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTR 149 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~ 149 (408)
...+.++.||++||++|+.+.|.++++++ ++.|..||++ ++++++++|| .++|++ +.+|+.. ..|..+.
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~--~~~g~~~ 84 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL--MMHRVNT 84 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE--EESSCCH
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE--EecCCCH
Confidence 34678999999999999999999887643 4899999999 7899999999 999976 4578554 4567899
Q ss_pred HHHHHHHHhHh
Q 015368 150 DVISAWVREKM 160 (408)
Q Consensus 150 ~~l~~~i~~~~ 160 (408)
+.|.++|.+.+
T Consensus 85 ~~l~~~l~~~~ 95 (100)
T 1wjk_A 85 SKLEKQLRKLS 95 (100)
T ss_dssp HHHHHHHHSSS
T ss_pred HHHHHHHHHHH
Confidence 99999998665
No 213
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.25 E-value=1.1e-11 Score=106.93 Aligned_cols=87 Identities=11% Similarity=0.353 Sum_probs=72.9
Q ss_pred CCCcEEEEEec-CCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc----------------------------cHhHHH
Q 015368 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL----------------------------EKDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~ 121 (408)
.+|+++|.||+ +||++|+.++|.+.++++++++ ++.++.|++|. +..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 67999999997 9999999999999999999987 69999999874 235778
Q ss_pred HcCCC------cCcEEEEEe-CCeEeEEeeCCC----CHHHHHHHHHh
Q 015368 122 EYNIL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVRE 158 (408)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~ 158 (408)
.|++. ++|++++++ +|+++..+.|.. ..+++.+.|+.
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 89998 899999998 998888887753 45666666653
No 214
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.24 E-value=1.2e-11 Score=102.55 Aligned_cols=84 Identities=11% Similarity=0.144 Sum_probs=67.4
Q ss_pred CCCcEEEEEecCC-ChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc----------------------cHhHHHHcCCCcC
Q 015368 72 KNRNVMVMFYANW-CYWSKKLAPEFAAAAKMLKGEADLVMVDAYL----------------------EKDLAKEYNILAY 128 (408)
Q Consensus 72 ~~~~~~v~f~a~w-C~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~----------------------~~~~~~~~~i~~~ 128 (408)
.+++++|+||++| |++|+.++|.+.+++++ .++.++.|+.|. +..+++.|++...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 6789999999999 99999999999999988 579999998872 2467889999887
Q ss_pred ---------cEEEEEe-CCeEeEEeeC--CCCHHHHHHHHH
Q 015368 129 ---------PTLYLFV-AGVRQFQFFG--ERTRDVISAWVR 157 (408)
Q Consensus 129 ---------Pt~~~~~-~g~~~~~~~g--~~~~~~l~~~i~ 157 (408)
|++++++ +|+++..+.| .....++.++++
T Consensus 121 ~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~ 161 (175)
T 1xvq_A 121 DGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALA 161 (175)
T ss_dssp SSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHH
T ss_pred ccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHH
Confidence 8999998 9988888864 223334444443
No 215
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.24 E-value=1.8e-11 Score=103.93 Aligned_cols=102 Identities=10% Similarity=-0.014 Sum_probs=77.6
Q ss_pred cEEcC-hhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-----------cHhHHH---
Q 015368 58 VVSLN-GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-----------EKDLAK--- 121 (408)
Q Consensus 58 ~~~l~-~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-----------~~~~~~--- 121 (408)
+.+++ ++.+...-.++|+++|+|||+||++| .++|.+.+++++|++ ++.++.|+|+. ..++++
T Consensus 22 l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~ 100 (207)
T 2r37_A 22 ALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVR 100 (207)
T ss_dssp EEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHHHTS
T ss_pred eeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHHHhcc
Confidence 34444 44443223478999999999999999 789999999999976 79999998752 123455
Q ss_pred ---HcCCC-------------------------------------------------cCcEEEEEe-CCeEeEEeeCCCC
Q 015368 122 ---EYNIL-------------------------------------------------AYPTLYLFV-AGVRQFQFFGERT 148 (408)
Q Consensus 122 ---~~~i~-------------------------------------------------~~Pt~~~~~-~g~~~~~~~g~~~ 148 (408)
++++. ..|+.++++ +|+++.+|.|..+
T Consensus 101 ~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~ 180 (207)
T 2r37_A 101 PGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTT 180 (207)
T ss_dssp SCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSC
T ss_pred hhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCC
Confidence 55431 016889998 9999999999999
Q ss_pred HHHHHHHHHhHh
Q 015368 149 RDVISAWVREKM 160 (408)
Q Consensus 149 ~~~l~~~i~~~~ 160 (408)
.+++.+.|++.+
T Consensus 181 ~~~l~~~I~~ll 192 (207)
T 2r37_A 181 VSNVKMDILSYM 192 (207)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999888776
No 216
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.23 E-value=4.5e-12 Score=103.05 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=72.6
Q ss_pred CCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc---------
Q 015368 47 NHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL--------- 115 (408)
Q Consensus 47 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~--------- 115 (408)
|..+|.+ .+.+.+++.++..-.++|+++|.|| ++||++|..++|.+.++++++++ ++.++.|+.|.
T Consensus 7 G~~aPdF---~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~ 83 (157)
T 4g2e_A 7 GELAPDF---ELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKE 83 (157)
T ss_dssp TSBCCCC---EEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHH
T ss_pred CCCCcCe---EeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHH
Confidence 4445544 2334444444322236899999999 99999999999999999998876 88999888764
Q ss_pred ------------cHhHHHHcCCC-----------cCcEEEEEe-CCeEeEEeeC-----CCCHHHHHHHHHh
Q 015368 116 ------------EKDLAKEYNIL-----------AYPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVRE 158 (408)
Q Consensus 116 ------------~~~~~~~~~i~-----------~~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~ 158 (408)
+.+++++||+. ..|++++++ +|++...+.| ..+.+++.+.|+.
T Consensus 84 ~~~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 84 HNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp HTTCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred HcCCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 23567788874 468899998 8987766643 3467778777753
No 217
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.23 E-value=5.8e-11 Score=115.66 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=82.4
Q ss_pred EEcChhhHHHHHc-CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCC
Q 015368 59 VSLNGKNFSEFMG-KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAG 137 (408)
Q Consensus 59 ~~l~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g 137 (408)
..++++.++.+.. .+++.++.||++||++|+.+.|.+++++..+. ++.+..||.+++++++++|+|.++|++++ +|
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g 178 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAVFV--NG 178 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEEEE--CC
Confidence 4566777766653 45677999999999999999999999999887 89999999999999999999999999977 88
Q ss_pred eEeEEeeCCCCHHHHHHHHHhH
Q 015368 138 VRQFQFFGERTRDVISAWVREK 159 (408)
Q Consensus 138 ~~~~~~~g~~~~~~l~~~i~~~ 159 (408)
+.+.. |..+.++|.+|+.+.
T Consensus 179 ~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 179 KEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEE--SCCCHHHHHHHHCCS
T ss_pred EEEec--CCCCHHHHHHHHhhc
Confidence 76544 999999999998654
No 218
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.21 E-value=8.7e-12 Score=88.79 Aligned_cols=63 Identities=17% Similarity=0.183 Sum_probs=51.2
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc-ccHhHHHHcCCCcCcEEEEEeCCeEe
Q 015368 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-LEKDLAKEYNILAYPTLYLFVAGVRQ 140 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~-~~~~~~~~~~i~~~Pt~~~~~~g~~~ 140 (408)
.++.||++||++|+.+.|.++++.++++..+.++.||.+ ++.+++++||++++|++++ +|+.+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~ 66 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAF 66 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEE
Confidence 367899999999999999999988776445566666654 5788999999999999877 88643
No 219
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.18 E-value=1.3e-11 Score=100.97 Aligned_cols=111 Identities=14% Similarity=0.257 Sum_probs=82.1
Q ss_pred CCCCCCccCCCcEEcChhh--HHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------
Q 015368 47 NHTWPLLYAKDVVSLNGKN--FSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------- 115 (408)
Q Consensus 47 ~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~------- 115 (408)
|..+|++ .+.+.+++. +.+...++|++++.|| ++||++|..++|.+.++++++++ ++.++.|+.|.
T Consensus 8 G~~aPdF---~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 84 (164)
T 4gqc_A 8 GEKAPDF---TLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKF 84 (164)
T ss_dssp TSBCCCC---EEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHH
T ss_pred CCCCcCc---EeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHH
Confidence 4455544 344455543 3455568899999998 99999999999999999999877 79999998753
Q ss_pred --------------cHhHHHHcCCC----------cCcEEEEEe-CCeEeEEeeC-----CCCHHHHHHHHHhHh
Q 015368 116 --------------EKDLAKEYNIL----------AYPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVREKM 160 (408)
Q Consensus 116 --------------~~~~~~~~~i~----------~~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~~~ 160 (408)
+.++++.||+. ..|++++++ +|++...+.+ ..+.+++.+.+++..
T Consensus 85 ~~~~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 85 KDENRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred HHhcCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 34577888874 368899998 9987776654 346778877776654
No 220
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.18 E-value=4.7e-11 Score=102.48 Aligned_cols=89 Identities=19% Similarity=0.344 Sum_probs=73.1
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc----------------------------HhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~ 121 (408)
++|+++|+|| ++||++|..++|.+.++++++++ ++.++.|++|.. ..+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 6789999999 99999999999999999999964 788888887531 24567
Q ss_pred HcCC-----CcCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 122 EYNI-----LAYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 122 ~~~i-----~~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
.|++ ...|++++++ +|+++..+.|. .+.+++.+.|++..
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 7888 3689999998 89888887663 56788888887654
No 221
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.18 E-value=7.9e-11 Score=84.84 Aligned_cols=76 Identities=21% Similarity=0.295 Sum_probs=62.2
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccH----hHHHHcC--CCcCcEEEEEeCCeEeEEeeCCCCH
Q 015368 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK----DLAKEYN--ILAYPTLYLFVAGVRQFQFFGERTR 149 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~----~~~~~~~--i~~~Pt~~~~~~g~~~~~~~g~~~~ 149 (408)
-++.||++||++|+.+.+.+++++++++ ++.+..+|+++++ +++++++ +.++|++ +.+|+.+. | .
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~---~---~ 72 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG---G---Y 72 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE---S---S
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE---C---H
Confidence 3678999999999999999999998876 6999999998764 7999999 9999998 34785542 3 2
Q ss_pred HHHHHHHHhHh
Q 015368 150 DVISAWVREKM 160 (408)
Q Consensus 150 ~~l~~~i~~~~ 160 (408)
+++.+++++.+
T Consensus 73 ~~l~~~~~~~~ 83 (85)
T 1ego_A 73 TDFAAWVKENL 83 (85)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 68888887754
No 222
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.17 E-value=1.4e-10 Score=95.45 Aligned_cols=105 Identities=9% Similarity=-0.023 Sum_probs=79.1
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEecCCCh-hHHhhhHHHHHHHHHhc---CCcEEEEEeCcc------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLK---GEADLVMVDAYL------------------ 115 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~a~wC~-~C~~~~p~~~~~~~~~~---~~v~~~~v~~~~------------------ 115 (408)
+.+.+++.++..-..+|+++|+||++||+ .|..++|.+.+++++++ .++.++.|.+|.
T Consensus 13 l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~ 92 (170)
T 3me7_A 13 LVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDG 92 (170)
T ss_dssp EEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCS
T ss_pred EEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 34444444432223589999999999997 69999999999999995 368888888751
Q ss_pred -------------cHhHHHHcCC---------CcCcEEEEEe-CCeEeEEeeCC-CCHHHHHHHHHhHhCC
Q 015368 116 -------------EKDLAKEYNI---------LAYPTLYLFV-AGVRQFQFFGE-RTRDVISAWVREKMTL 162 (408)
Q Consensus 116 -------------~~~~~~~~~i---------~~~Pt~~~~~-~g~~~~~~~g~-~~~~~l~~~i~~~~~~ 162 (408)
...+++.||+ ...|++++++ +|+++..+.|. .+.+++.+.|.+....
T Consensus 93 ~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 93 KGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp SSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTC
T ss_pred CCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 1235566553 3568899998 99888888886 7899999999888754
No 223
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.16 E-value=9.1e-11 Score=95.51 Aligned_cols=77 Identities=18% Similarity=0.162 Sum_probs=62.8
Q ss_pred CCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc---------------------cHhHHHHcCCCcCc
Q 015368 73 NRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------EKDLAKEYNILAYP 129 (408)
Q Consensus 73 ~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~---------------------~~~~~~~~~i~~~P 129 (408)
+++++|+|| ++||++|..++|.+.++++++++ + .++.|+++. +.++++.||+...|
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 347999987 99999999999999999999976 6 888888753 34578889999998
Q ss_pred -------EEEEEeCCeEeEEeeCCCCHHH
Q 015368 130 -------TLYLFVAGVRQFQFFGERTRDV 151 (408)
Q Consensus 130 -------t~~~~~~g~~~~~~~g~~~~~~ 151 (408)
++++ .+|++...+.|......
T Consensus 114 ~~g~~~~~~li-~~G~i~~~~~g~~~~~~ 141 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKFKRVKISPEVS 141 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEEEEESCCHHHH
T ss_pred cCCccceEEEE-cCCEEEEEEccCCcccc
Confidence 5555 99998888988765433
No 224
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.16 E-value=1.4e-10 Score=97.05 Aligned_cols=89 Identities=13% Similarity=0.185 Sum_probs=72.4
Q ss_pred CCCcEEEEEec-CCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc-------------------------HhHHHHcC
Q 015368 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------------KDLAKEYN 124 (408)
Q Consensus 72 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~-------------------------~~~~~~~~ 124 (408)
.+++++|+||+ +||++|..++|.+.++++++++ ++.++.|+++.. ..+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 57899999995 9999999999999999999875 789998887632 23566677
Q ss_pred CC------cCcEEEEEe-CCeEeEEeeCCC----CHHHHHHHHHhHh
Q 015368 125 IL------AYPTLYLFV-AGVRQFQFFGER----TRDVISAWVREKM 160 (408)
Q Consensus 125 i~------~~Pt~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~~ 160 (408)
+. ..|++++++ +|++...+.|.. +.+++.+.|++..
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 76 369999998 998888887754 5788888887654
No 225
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.14 E-value=1.3e-10 Score=94.94 Aligned_cols=99 Identities=8% Similarity=0.066 Sum_probs=72.9
Q ss_pred EEcChhhHHHHHcCCCcEEEEEec-CCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc----------------------
Q 015368 59 VSLNGKNFSEFMGKNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL---------------------- 115 (408)
Q Consensus 59 ~~l~~~~~~~~~~~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~---------------------- 115 (408)
...+++.++..-..+|+++|+||+ +||++|..++|.+.++++++ .++.++.|++|.
T Consensus 28 ~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~ 106 (163)
T 1psq_A 28 TTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDY 106 (163)
T ss_dssp ECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECT
T ss_pred EcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCC
Confidence 334444433222367899999995 99999999999999999988 678888887653
Q ss_pred -cHhHHHHcCCC----cC--cEEEEEe-CCeEeEEeeCC-----CCHHHHHHHHHh
Q 015368 116 -EKDLAKEYNIL----AY--PTLYLFV-AGVRQFQFFGE-----RTRDVISAWVRE 158 (408)
Q Consensus 116 -~~~~~~~~~i~----~~--Pt~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~ 158 (408)
+..+++.|++. ++ |++++++ +|+++..+.|. .+.+++.+.|++
T Consensus 107 ~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 107 FDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp TTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred chhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 23466777776 33 9999998 99888888763 334677776653
No 226
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.12 E-value=2.1e-10 Score=95.34 Aligned_cols=102 Identities=11% Similarity=0.054 Sum_probs=77.2
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc-------------------
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL------------------- 115 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~------------------- 115 (408)
.+.+.+++.+...-..+|+++|.|| ++||++|..++|.+.++++++++ ++.++.|++|.
T Consensus 35 ~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~ 114 (179)
T 3ixr_A 35 PLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVS 114 (179)
T ss_dssp CEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEE
T ss_pred eEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEE
Confidence 4556666655533346789999998 99999999999999999999977 78999998864
Q ss_pred --cHhHHHHcCCCc------------CcEEEEEe-CCeEeEEeeCCC---CHHHHHHHHHh
Q 015368 116 --EKDLAKEYNILA------------YPTLYLFV-AGVRQFQFFGER---TRDVISAWVRE 158 (408)
Q Consensus 116 --~~~~~~~~~i~~------------~Pt~~~~~-~g~~~~~~~g~~---~~~~l~~~i~~ 158 (408)
+.++++.|++.. .|++++++ +|+++..+.|.. ..+++.+.|++
T Consensus 115 D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 115 DSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp CTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHH
T ss_pred CCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 235678888854 58899998 998887776543 34555555554
No 227
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.11 E-value=1.4e-10 Score=98.95 Aligned_cols=89 Identities=12% Similarity=0.308 Sum_probs=73.1
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc----------------------------HhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~ 121 (408)
.+|+++|+|| ++||++|..++|.+.++++++++ ++.++.|++|.. ..+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 5789999999 99999999999999999999976 799998887532 24567
Q ss_pred HcCCC------cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 122 EYNIL------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
.|++. .+|++++++ +|+++..+.|. .+.+++.+.|+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 78884 699999998 89888877664 46788888877654
No 228
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.09 E-value=2.3e-10 Score=98.04 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=64.0
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEe---------------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVD--------------------------------------- 112 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~--------------------------------------- 112 (408)
+++++++.||++||++|++++|.++++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 457899999999999999999999998763 34444332
Q ss_pred -C----cccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 113 -A----YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 113 -~----~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
| +++.++++++||+++||+ ++.+|. .+.|..+.+.|.++|.+..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHHhh
Confidence 1 234568899999999998 566783 5689999999999997653
No 229
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.09 E-value=2.2e-10 Score=99.61 Aligned_cols=88 Identities=14% Similarity=0.313 Sum_probs=72.4
Q ss_pred CCCcEEEEEec-CCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc----------------------------HhHHH
Q 015368 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~ 121 (408)
.+++++|+||+ +||++|..++|.+.++++++++ ++.++.|++|.. .++++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 67899999999 9999999999999999999986 799999987642 24678
Q ss_pred HcCCC------cCcEEEEEe-CCeEeEEeeC----CCCHHHHHHHHHhH
Q 015368 122 EYNIL------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (408)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (408)
.||+. .+|++++++ +|++...+.| ..+.+++.+.|+..
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 88887 689999998 9988777665 34567777777554
No 230
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.07 E-value=6.3e-10 Score=92.05 Aligned_cols=83 Identities=13% Similarity=0.151 Sum_probs=67.1
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC--------------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~-------------------------------------- 113 (408)
.++++++.||++||++|+.+.|.+.++.+++++ +.+...+.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 467899999999999999999999999998775 55544442
Q ss_pred -------------------------------cccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 114 -------------------------------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 114 -------------------------------~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+.+..+++++||.|+||+++ +|+ .+.|..+.+.+.+.|.+.+
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~---~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA---LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE---EECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE---EeeCCCCHHHHHHHHHHHH
Confidence 22345678899999999987 773 6679999999999998765
No 231
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.06 E-value=2.9e-10 Score=98.74 Aligned_cols=94 Identities=15% Similarity=0.186 Sum_probs=75.9
Q ss_pred HHHHcCCCc-EEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc---------------------------cH
Q 015368 67 SEFMGKNRN-VMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL---------------------------EK 117 (408)
Q Consensus 67 ~~~~~~~~~-~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~---------------------------~~ 117 (408)
.+.+..++. +|+.||++||++|..++|.+.++++++++ ++.++.|++|. +.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 334435675 56689999999999999999999999976 79999999864 23
Q ss_pred hHHHHcCCC-------cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 118 DLAKEYNIL-------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 118 ~~~~~~~i~-------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
.+++.||+. ++|++++++ +|++...+.|. ++.+++.+.|+...
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 578889987 899999998 99887777665 47888888887654
No 232
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.06 E-value=2.1e-10 Score=94.52 Aligned_cols=86 Identities=15% Similarity=0.186 Sum_probs=67.9
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc-----------------------cHhHHHHcCCCc
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-----------------------EKDLAKEYNILA 127 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~-----------------------~~~~~~~~~i~~ 127 (408)
.+++++|.|| ++||++|..++|.+.++++++ .++.++.|++|. +..+ +.|++..
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~ 123 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLI 123 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBB
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEe
Confidence 5789999999 899999999999999999988 678888887753 2335 6666642
Q ss_pred ---------CcEEEEEe-CCeEeEEeeC-----CCCHHHHHHHHHhH
Q 015368 128 ---------YPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVREK 159 (408)
Q Consensus 128 ---------~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~~ 159 (408)
.|++++++ +|++...+.| ..+.+++.+.|++.
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 59999998 9988888864 34567787777653
No 233
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.05 E-value=3.5e-10 Score=92.74 Aligned_cols=108 Identities=9% Similarity=0.058 Sum_probs=75.9
Q ss_pred CCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc---------
Q 015368 46 NNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------- 115 (408)
Q Consensus 46 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~--------- 115 (408)
.|...|.+ .+.+++++.+...-..+++++|+|| ++||++|..++|.+.+++++ .++.++.|++|.
T Consensus 22 ~G~~aP~f---~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~ 96 (166)
T 3p7x_A 22 EGDFAPDF---TVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCA 96 (166)
T ss_dssp TTSBCCCC---EEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHH
T ss_pred CCCCCCCe---EEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHH
Confidence 33444443 3344445444322236789999999 78999999999999999887 578888888653
Q ss_pred --------------cHhHHHHcCCCc------CcEEEEEe-CCeEeEEeeC-----CCCHHHHHHHHHh
Q 015368 116 --------------EKDLAKEYNILA------YPTLYLFV-AGVRQFQFFG-----ERTRDVISAWVRE 158 (408)
Q Consensus 116 --------------~~~~~~~~~i~~------~Pt~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~ 158 (408)
+.++++.||+.. .|++++++ +|+++..+.+ ..+.+++.+.|++
T Consensus 97 ~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 97 SAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp HHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred HcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 235667788775 89999998 9988777543 3456777766653
No 234
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.04 E-value=4.3e-10 Score=92.06 Aligned_cols=85 Identities=7% Similarity=-0.031 Sum_probs=65.4
Q ss_pred EcChhhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc-----------------------
Q 015368 60 SLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL----------------------- 115 (408)
Q Consensus 60 ~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~----------------------- 115 (408)
..+++.+...-..+++++|+|| ++||++|..++|.+.++++++ .++.++.|++|.
T Consensus 30 ~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~ 108 (165)
T 1q98_A 30 GNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAKTVSTFR 108 (165)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTT
T ss_pred CCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccc
Confidence 3444433322236789999999 899999999999999999998 678888887642
Q ss_pred cHhHHHHcCCCc---------CcEEEEEe-CCeEeEEeeC
Q 015368 116 EKDLAKEYNILA---------YPTLYLFV-AGVRQFQFFG 145 (408)
Q Consensus 116 ~~~~~~~~~i~~---------~Pt~~~~~-~g~~~~~~~g 145 (408)
+..+++.|++.. .|++++++ +|+++..+.|
T Consensus 109 ~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 109 NHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred cchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeC
Confidence 345778888853 49999998 9988888865
No 235
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.04 E-value=6.1e-10 Score=91.17 Aligned_cols=75 Identities=11% Similarity=0.056 Sum_probs=60.3
Q ss_pred CCCcEEEEEe-cCCChhHHh-hhHHHHHHHHHhcC-Cc-EEEEEeCcc-----------------------cHhHHHHcC
Q 015368 72 KNRNVMVMFY-ANWCYWSKK-LAPEFAAAAKMLKG-EA-DLVMVDAYL-----------------------EKDLAKEYN 124 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~-~~p~~~~~~~~~~~-~v-~~~~v~~~~-----------------------~~~~~~~~~ 124 (408)
++++++|.|| ++||++|.. ++|.+.++++++++ ++ .++.|+.+. +.++++.||
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~g 109 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVD 109 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcC
Confidence 5778888886 999999999 99999999999865 79 999998753 234667788
Q ss_pred CCcC-----------cEEEEEeCCeEeEEeeCC
Q 015368 125 ILAY-----------PTLYLFVAGVRQFQFFGE 146 (408)
Q Consensus 125 i~~~-----------Pt~~~~~~g~~~~~~~g~ 146 (408)
+... |+++++++|++...+.+.
T Consensus 110 v~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~ 142 (167)
T 2wfc_A 110 MELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEP 142 (167)
T ss_dssp CEECCHHHHSSCEECCEEEEEETTEEEEEEECT
T ss_pred CccccccccCcccceEEEEEEeCCEEEEEEecC
Confidence 7653 888888999887777654
No 236
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.01 E-value=1.1e-09 Score=90.88 Aligned_cols=86 Identities=14% Similarity=0.101 Sum_probs=63.7
Q ss_pred CCC-cEEEEEecCCChhHHh-hhHHHHHHHHHhcC-CcE-EEEEeCcc-----------------------cHhHHHHcC
Q 015368 72 KNR-NVMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (408)
Q Consensus 72 ~~~-~~~v~f~a~wC~~C~~-~~p~~~~~~~~~~~-~v~-~~~v~~~~-----------------------~~~~~~~~~ 124 (408)
+++ ++++.||++||++|.. ++|.+.++++++++ ++. ++.|+.+. +.++++.||
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 134 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIG 134 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcC
Confidence 456 4566677999999999 79999999999976 788 88888764 234677888
Q ss_pred CC-----------cCcEEEEEeCCeEeEEeeCC----CCHHHHHHHHH
Q 015368 125 IL-----------AYPTLYLFVAGVRQFQFFGE----RTRDVISAWVR 157 (408)
Q Consensus 125 i~-----------~~Pt~~~~~~g~~~~~~~g~----~~~~~l~~~i~ 157 (408)
+. ..|+++++++|++...+.|. .+...+.+.++
T Consensus 135 v~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~ 182 (184)
T 3uma_A 135 MEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLE 182 (184)
T ss_dssp CEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHH
T ss_pred CceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHh
Confidence 75 35778888999888877653 33444444443
No 237
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.99 E-value=4.5e-10 Score=98.28 Aligned_cols=87 Identities=13% Similarity=0.318 Sum_probs=70.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc----------------------------HhHHH
Q 015368 72 KNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAK 121 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~ 121 (408)
.+|+++|+|| ++||++|..++|.+.++++++++ ++.++.|++|.. ..+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 6789999999 99999999999999999999976 799999988642 24677
Q ss_pred HcCCC------cCcEEEEEe-CCeEeEEeeC----CCCHHHHHHHHHh
Q 015368 122 EYNIL------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVRE 158 (408)
Q Consensus 122 ~~~i~------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~ 158 (408)
.||+. .+|++++++ +|++...+.+ ..+.+++.+.|+.
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 78875 579999998 9988777765 3456777776654
No 238
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.99 E-value=2.3e-09 Score=88.05 Aligned_cols=104 Identities=15% Similarity=0.202 Sum_probs=73.9
Q ss_pred CcEEcChhhHHHHHcCCCcEEEEEecCCCh-hHHhhhHHHHHHHHHhcC---CcEEEEEeCccc---H----hHHHHcC-
Q 015368 57 DVVSLNGKNFSEFMGKNRNVMVMFYANWCY-WSKKLAPEFAAAAKMLKG---EADLVMVDAYLE---K----DLAKEYN- 124 (408)
Q Consensus 57 ~~~~l~~~~~~~~~~~~~~~~v~f~a~wC~-~C~~~~p~~~~~~~~~~~---~v~~~~v~~~~~---~----~~~~~~~- 124 (408)
.+.+.+++.++..-.+||+++|+||++||+ +|...++.+.++.+.++. ++.++.|.+|.. + +.+++|+
T Consensus 16 ~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~ 95 (170)
T 4hde_A 16 QFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTE 95 (170)
T ss_dssp EEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCS
T ss_pred EEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCC
Confidence 455566665554444789999999999997 799999999998887743 788888887632 1 1222222
Q ss_pred -----------------------------------CCcCcEEEEEe-CCeEeEEeeCC--CCHHHHHHHHHhHh
Q 015368 125 -----------------------------------ILAYPTLYLFV-AGVRQFQFFGE--RTRDVISAWVREKM 160 (408)
Q Consensus 125 -----------------------------------i~~~Pt~~~~~-~g~~~~~~~g~--~~~~~l~~~i~~~~ 160 (408)
+...|++++++ +|+++..|.|. ...+.+.+-|++.+
T Consensus 96 ~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 96 DTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp CCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred CCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 22347889998 99888889874 45677877776554
No 239
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.99 E-value=1.5e-09 Score=88.58 Aligned_cols=75 Identities=11% Similarity=0.045 Sum_probs=61.8
Q ss_pred CCCcEEEEEe-cCCChhHH-hhhHHHHHHHHHhcC-CcE-EEEEeCcc-----------------------cHhHHHHcC
Q 015368 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYN 124 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~-~~~p~~~~~~~~~~~-~v~-~~~v~~~~-----------------------~~~~~~~~~ 124 (408)
++|+++|+|| ++||++|. .++|.+.++++++++ ++. ++.|+.+. +.++++.||
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALG 113 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcC
Confidence 6789999999 89999999 999999999999864 788 88887653 234677888
Q ss_pred CC------c-----CcEEEEEeCCeEeEEeeCC
Q 015368 125 IL------A-----YPTLYLFVAGVRQFQFFGE 146 (408)
Q Consensus 125 i~------~-----~Pt~~~~~~g~~~~~~~g~ 146 (408)
+. + .|+++++++|++...+.|.
T Consensus 114 v~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 114 LELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp CEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred cccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 76 2 7999999999887777765
No 240
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.98 E-value=1.5e-09 Score=89.28 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=67.7
Q ss_pred EcChhhHHHHH-cCCCcEEE-EEecCCChhHH-hhhHHHHHHHHHhcC-CcEEEE-EeCcc-------------------
Q 015368 60 SLNGKNFSEFM-GKNRNVMV-MFYANWCYWSK-KLAPEFAAAAKMLKG-EADLVM-VDAYL------------------- 115 (408)
Q Consensus 60 ~l~~~~~~~~~-~~~~~~~v-~f~a~wC~~C~-~~~p~~~~~~~~~~~-~v~~~~-v~~~~------------------- 115 (408)
..+++.++..- .++++++| .||++||++|. +++|.+.++++++++ ++.++. |..+.
T Consensus 29 ~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~ 108 (173)
T 3mng_A 29 GEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRL 108 (173)
T ss_dssp SSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEE
T ss_pred CCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEE
Confidence 34455444222 25665555 55699999999 599999999999976 677775 77653
Q ss_pred ----cHhHHHHcCCC-------------cCcEEEEEeCCeEeEEeeCC----CCHHHHHHHHH
Q 015368 116 ----EKDLAKEYNIL-------------AYPTLYLFVAGVRQFQFFGE----RTRDVISAWVR 157 (408)
Q Consensus 116 ----~~~~~~~~~i~-------------~~Pt~~~~~~g~~~~~~~g~----~~~~~l~~~i~ 157 (408)
+.++++.||+. ..|+++++++|++...+.++ ++..+..+.|.
T Consensus 109 l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~ 171 (173)
T 3mng_A 109 LADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIIS 171 (173)
T ss_dssp EECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHH
T ss_pred EECCChHHHHHhCCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHH
Confidence 23577888875 35999999999887777664 34455554443
No 241
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.97 E-value=1.2e-09 Score=93.18 Aligned_cols=80 Identities=11% Similarity=0.179 Sum_probs=62.9
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC--------------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~-------------------------------------- 113 (408)
+++++++.||++||++|+++.|.++++.+. ++.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 457899999999999999999999997653 344432211
Q ss_pred ------cccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHh
Q 015368 114 ------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (408)
Q Consensus 114 ------~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (408)
+++.++++++||+++||+++ .||+ .+.|..+.++|.++|.+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHh
Confidence 13456788999999999987 7884 56899999999999875
No 242
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.97 E-value=1.8e-09 Score=91.24 Aligned_cols=97 Identities=7% Similarity=0.014 Sum_probs=71.0
Q ss_pred CCCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc--------
Q 015368 45 NNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL-------- 115 (408)
Q Consensus 45 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~-------- 115 (408)
..|...|.+ .+.+.+++.++..-..+|+++|+|| ++||++|..++|.+.++++++ .++.++.|++|.
T Consensus 53 ~~G~~aPdf---~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~ 128 (200)
T 3zrd_A 53 QIGDKAKDF---TLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFC 128 (200)
T ss_dssp CTTCBCCCC---EEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCT
T ss_pred CCCCCCCCe---EEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHH
Confidence 344444543 3444555544432236899999999 689999999999999999999 678888888753
Q ss_pred ---------------cHhHHHHcCCC---------cCcEEEEEe-CCeEeEEeeC
Q 015368 116 ---------------EKDLAKEYNIL---------AYPTLYLFV-AGVRQFQFFG 145 (408)
Q Consensus 116 ---------------~~~~~~~~~i~---------~~Pt~~~~~-~g~~~~~~~g 145 (408)
+.++++.||+. ..|++++++ +|+++..+.+
T Consensus 129 ~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~ 183 (200)
T 3zrd_A 129 GAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELV 183 (200)
T ss_dssp TTTTCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred HHcCCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEec
Confidence 34567778875 269999998 9988777654
No 243
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.96 E-value=2.4e-09 Score=88.03 Aligned_cols=76 Identities=12% Similarity=0.072 Sum_probs=56.7
Q ss_pred cCCCcEEEEEecCCChhHHhh-hHHHHHHHHHhcC-CcE-EEEEeCccc-----------------------HhHHHHcC
Q 015368 71 GKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKG-EAD-LVMVDAYLE-----------------------KDLAKEYN 124 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~-~v~-~~~v~~~~~-----------------------~~~~~~~~ 124 (408)
..++++++.||++||++|..+ +|.+.++++++++ ++. ++.|+.+.. ..+++.||
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 121 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLE 121 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHT
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEEEECCccHHHHHhC
Confidence 333577889999999999999 9999999999865 788 888887531 23556666
Q ss_pred CCc-----------CcEEEEEeCCeEeEEeeCC
Q 015368 125 ILA-----------YPTLYLFVAGVRQFQFFGE 146 (408)
Q Consensus 125 i~~-----------~Pt~~~~~~g~~~~~~~g~ 146 (408)
+.. .|+.+++++|++...+.|.
T Consensus 122 v~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~ 154 (171)
T 2pwj_A 122 LTTDLSAGLLGIRSERWSAYVVDGKVKALNVEE 154 (171)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEEEEEEECS
T ss_pred CccccccccCCcccceeEEEEECCEEEEEEeec
Confidence 642 3455666699887777764
No 244
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.87 E-value=3.9e-08 Score=75.60 Aligned_cols=95 Identities=14% Similarity=0.192 Sum_probs=80.4
Q ss_pred CcEEc-ChhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEe
Q 015368 57 DVVSL-NGKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 57 ~~~~l-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 135 (408)
.+..| +.++++.++..+++++|-|+++||.+| .+.|.++|+.+ +++.|+.++ ++++++++++. .|++++|+
T Consensus 22 ~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~~~vvlfk 93 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-GNTICLFR 93 (124)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-SSCEEEEE
T ss_pred cceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-CCeEEEEE
Confidence 34445 457888888888999999999999998 67899999999 789999886 57899999999 79999999
Q ss_pred CC-eEeEEeeC----CCCHHHHHHHHHhH
Q 015368 136 AG-VRQFQFFG----ERTRDVISAWVREK 159 (408)
Q Consensus 136 ~g-~~~~~~~g----~~~~~~l~~~i~~~ 159 (408)
++ .....|.| ..+.+.|.+||..+
T Consensus 94 kfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 94 LVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp TTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred cCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 65 34567886 78999999999865
No 245
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.87 E-value=6.9e-09 Score=87.13 Aligned_cols=87 Identities=16% Similarity=0.218 Sum_probs=69.6
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc-------------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------------------------- 114 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~------------------------------------- 114 (408)
.++++++.||++||++|+.+.|.+.++.+.+.+++.|..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~~ 103 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHK 103 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 4688999999999999999999999999999877777765542
Q ss_pred ------------------------------------ccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHh
Q 015368 115 ------------------------------------LEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE 158 (408)
Q Consensus 115 ------------------------------------~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 158 (408)
.+...++++||.|+||+++ +|+......|..+.+.+.+.|+.
T Consensus 104 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~i~~ 181 (192)
T 3h93_A 104 KLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKLADY 181 (192)
T ss_dssp CCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHHHHH
Confidence 0112356789999999977 78666666688899999888876
Q ss_pred Hh
Q 015368 159 KM 160 (408)
Q Consensus 159 ~~ 160 (408)
.+
T Consensus 182 l~ 183 (192)
T 3h93_A 182 LI 183 (192)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 246
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.87 E-value=1.3e-07 Score=82.57 Aligned_cols=198 Identities=13% Similarity=0.064 Sum_probs=128.3
Q ss_pred CCcccccChhHHHHHh-ccCCeEEEEEecCCCCcCH---HHHHHHh-ccCC---ceeEEEec-----CHhHHhhcCCCCC
Q 015368 162 LGTYSITTTDEAERIL-TVESKLVLGFLHDLEGMES---EELAAAS-KLHS---DVNFYQTT-----SADVAEFFHIHPK 228 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~-~~~~~~vi~f~~~~~~~~~---~~~~~~a-~~~~---~~~f~~~~-----~~~l~~~~~i~~~ 228 (408)
.++..++ .++++..+ ..++.++|.|+++||.++. +.+..++ ++.+ .+.|+.+. +.++++++++.
T Consensus 12 ~~v~~l~-~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~-- 88 (244)
T 3q6o_A 12 DPLTLLQ-ADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIP-- 88 (244)
T ss_dssp SSSEEEC-TTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCC--
T ss_pred CCceeCC-hhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCC--
Confidence 3466664 46666655 5568899999999999854 4456666 3443 68887663 46799999999
Q ss_pred CCCCeEEEeecCCC----cccccCCcCCHHHHHHHHhc----CC------CCceEeeccccccccccCC--ccEEEEEee
Q 015368 229 SKRPALIFLHLEAG----KATPFRHQFTRLAIANFVTH----TK------HPLVVTLTIHNAQFVFQDP--RKQLWLFAP 292 (408)
Q Consensus 229 ~~~p~l~~~~~~~~----~~~~y~g~~~~~~i~~fi~~----~~------~p~v~~lt~~~~~~~~~~~--~~~~i~f~~ 292 (408)
++|++++|+.+.. ....+.| .+.+.|.+||.. +. .|.+...+..++..++... .+.+++|.+
T Consensus 89 -~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~ 166 (244)
T 3q6o_A 89 -GFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEX 166 (244)
T ss_dssp -SSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEEC
T ss_pred -ccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEE
Confidence 5999999996432 2336666 578888888764 22 1223344445555555332 366777776
Q ss_pred CCCchHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCccccCCC-CCChHHHHHH
Q 015368 293 AYGSDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNG-ELTLSSIKSF 371 (408)
Q Consensus 293 ~~~~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~~~-~~~~~~i~~F 371 (408)
... ...++++..+... +++.+..++..+ ..+++.||++. .|.+++++.+|+.-.++. .-+.+.+..+
T Consensus 167 ~~~-----~~~~~~~~d~~~~-~~i~v~~~~~~~----~~l~~~f~v~~--~Pslvl~~~~g~~~~~~~~~~~r~~~~~~ 234 (244)
T 3q6o_A 167 GGS-----YLAREVALDLSQH-KGVAVRRVLNTE----ANVVRKFGVTD--FPSCYLLFRNGSVSRVPVLMESRSFYTAY 234 (244)
T ss_dssp TTC-----CHHHHHHHHTTTC-TTEEEEEEETTC----HHHHHHHTCCC--SSEEEEEETTSCEEECCCSSSSHHHHHHH
T ss_pred CCc-----chHHHHHHHhccC-CceEEEEEeCch----HHHHHHcCCCC--CCeEEEEeCCCCeEeeccccccHHHHHHH
Confidence 543 2455677777632 128888888542 47889999964 689988887666555553 3445556666
Q ss_pred HHHHh
Q 015368 372 GEEFL 376 (408)
Q Consensus 372 i~~~~ 376 (408)
++.+.
T Consensus 235 l~~~~ 239 (244)
T 3q6o_A 235 LQRLS 239 (244)
T ss_dssp HHTC-
T ss_pred HHhCC
Confidence 66543
No 247
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.86 E-value=3e-09 Score=75.65 Aligned_cols=71 Identities=11% Similarity=0.174 Sum_probs=53.8
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHH---HcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHH
Q 015368 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK---EYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (408)
Q Consensus 77 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~---~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (408)
++.||++||++|++..+.+++. ++.+..+|+++++++.+ ++++.++|++ +.+|+. .|..+.+.|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~--~~~g~~----~~g~~~~~l~ 70 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPVV--IAGDLS----WSGFRPDMIN 70 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE--EETTEE----EESCCHHHHG
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCEE--EECCEE----EecCCHHHHH
Confidence 6779999999999999988763 47788899998766554 5899999998 347743 2345677777
Q ss_pred HHHHhH
Q 015368 154 AWVREK 159 (408)
Q Consensus 154 ~~i~~~ 159 (408)
+++.+.
T Consensus 71 ~~l~~~ 76 (81)
T 1h75_A 71 RLHPAP 76 (81)
T ss_dssp GGSCCC
T ss_pred HHHhcc
Confidence 666543
No 248
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.86 E-value=1.1e-08 Score=89.09 Aligned_cols=85 Identities=13% Similarity=0.217 Sum_probs=66.1
Q ss_pred CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC---------------------------------------
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA--------------------------------------- 113 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~--------------------------------------- 113 (408)
++.+++.|+.+||++|+++.|.+.++.+. ++|.+..+..
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 46789999999999999999999987765 3566654432
Q ss_pred -----------cccHhHHHHcCCCcCcEEEEEe-CCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 114 -----------YLEKDLAKEYNILAYPTLYLFV-AGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 114 -----------~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+.+.++++++||+++||+++.+ +|+ .....|..+.+.|.++|.+..
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHH
Confidence 1234567889999999999988 684 467889999999999887655
No 249
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.86 E-value=1.8e-08 Score=86.59 Aligned_cols=86 Identities=13% Similarity=0.078 Sum_probs=68.2
Q ss_pred cEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc-------------------------------HhHHHH
Q 015368 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-------------------------------KDLAKE 122 (408)
Q Consensus 75 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~-------------------------------~~~~~~ 122 (408)
.+|+.||++||++|..++|.+.++++++++ ++.++.|++|.. .++++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 566677999999999999999999999976 799999987642 235677
Q ss_pred cCCC------------cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhHh
Q 015368 123 YNIL------------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREKM 160 (408)
Q Consensus 123 ~~i~------------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~~ 160 (408)
||+. .+|++++++ +|++...+.|. ++.+++.+.|+...
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 7773 379999998 89888777653 57888888876543
No 250
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.83 E-value=1.7e-08 Score=70.38 Aligned_cols=68 Identities=12% Similarity=0.174 Sum_probs=53.9
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHH---HcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHH
Q 015368 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAK---EYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (408)
Q Consensus 77 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~---~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (408)
++.|+++||++|++..+.+++. ++.+..+|++.++++.+ ++++.++|++++ +|+. .|..+.+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~----~~g~~~~~l~ 70 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH----WSGFRPERIK 70 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE----EESCCHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE----EcCCCHHHHH
Confidence 5779999999999999988764 47788889988776655 899999999873 7743 3445778888
Q ss_pred HHH
Q 015368 154 AWV 156 (408)
Q Consensus 154 ~~i 156 (408)
+++
T Consensus 71 ~~l 73 (75)
T 1r7h_A 71 QLQ 73 (75)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 251
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.81 E-value=1.6e-08 Score=87.18 Aligned_cols=86 Identities=8% Similarity=0.036 Sum_probs=68.5
Q ss_pred CcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc-----------------------------HhHHHH
Q 015368 74 RNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE-----------------------------KDLAKE 122 (408)
Q Consensus 74 ~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~-----------------------------~~~~~~ 122 (408)
++++|.|| ++||++|..+++.+.++++++++ ++.++.|++|.. .++++.
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ 109 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVK 109 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHH
Confidence 48999998 99999999999999999999876 789998887642 235667
Q ss_pred cCCC------------cCcEEEEEe-CCeEeEEeeCC----CCHHHHHHHHHhH
Q 015368 123 YNIL------------AYPTLYLFV-AGVRQFQFFGE----RTRDVISAWVREK 159 (408)
Q Consensus 123 ~~i~------------~~Pt~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~ 159 (408)
||+. .+|++++++ +|++...+.|+ ++.+++.+.|+..
T Consensus 110 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 110 LGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp TTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7774 479999998 89887777543 5678888877654
No 252
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.79 E-value=1.6e-08 Score=85.08 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=39.1
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY 114 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~ 114 (408)
.++++++.||++||++|+.+.|.+.++.+.+.+++.|..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 4689999999999999999999999999999878888888874
No 253
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.79 E-value=1.4e-08 Score=86.91 Aligned_cols=85 Identities=9% Similarity=0.117 Sum_probs=67.4
Q ss_pred cEEEEEecCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCccc----------------------------HhHHHHcCC
Q 015368 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYLE----------------------------KDLAKEYNI 125 (408)
Q Consensus 75 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~~----------------------------~~~~~~~~i 125 (408)
.+|+.||++||++|..+++.+.++++++++ ++.++.|++|.. ..+++.||+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 455566999999999999999999999977 899999988642 245677887
Q ss_pred C------------cCcEEEEEe-CCeEeEEeeC----CCCHHHHHHHHHhH
Q 015368 126 L------------AYPTLYLFV-AGVRQFQFFG----ERTRDVISAWVREK 159 (408)
Q Consensus 126 ~------------~~Pt~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 159 (408)
. ..|++++++ +|++...+.| .++.+++.+.|+..
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 3 379999998 8987777654 36788888888654
No 254
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.79 E-value=4.7e-09 Score=78.73 Aligned_cols=70 Identities=14% Similarity=0.082 Sum_probs=50.2
Q ss_pred hHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc-------HhHHHHcCCCcCcEEEEEeCC
Q 015368 65 NFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-------KDLAKEYNILAYPTLYLFVAG 137 (408)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~-------~~~~~~~~i~~~Pt~~~~~~g 137 (408)
.+++.+..+ .++.|+++||++|+.+.+.++++...+. + +..+|++.+ ..+.+.+|+.++|++ |.+|
T Consensus 4 ~~~~~i~~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g 76 (105)
T 1kte_A 4 FVNSKIQPG--KVVVFIKPTCPFCRKTQELLSQLPFKEG-L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGK 76 (105)
T ss_dssp HHHHHCCTT--CEEEEECSSCHHHHHHHHHHHHSCBCTT-S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETT
T ss_pred HHHhhcccC--CEEEEEcCCCHhHHHHHHHHHHcCCCCC-c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECC
Confidence 455555444 3667999999999999999987654443 2 555676655 357888999999997 4478
Q ss_pred eEeE
Q 015368 138 VRQF 141 (408)
Q Consensus 138 ~~~~ 141 (408)
+.+.
T Consensus 77 ~~i~ 80 (105)
T 1kte_A 77 ECIG 80 (105)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
No 255
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.74 E-value=3.8e-07 Score=87.96 Aligned_cols=181 Identities=13% Similarity=0.096 Sum_probs=122.7
Q ss_pred CcccccChhHHHHHh-ccCCeEEEEEecCCCCcC---HHHHHHHh-ccCC---ceeEEEec-----CHhHHhhcCCCCCC
Q 015368 163 GTYSITTTDEAERIL-TVESKLVLGFLHDLEGME---SEELAAAS-KLHS---DVNFYQTT-----SADVAEFFHIHPKS 229 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~-~~~~~~vi~f~~~~~~~~---~~~~~~~a-~~~~---~~~f~~~~-----~~~l~~~~~i~~~~ 229 (408)
.+..+ +.++++..+ +.++.++|.|+++||.++ .+.+..++ ++.+ .+.|+.+. +.+++++|+|.
T Consensus 13 ~V~~L-t~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~--- 88 (519)
T 3t58_A 13 PLTLL-DADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIA--- 88 (519)
T ss_dssp SSEEE-CTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCC---
T ss_pred CcEEC-ChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCc---
Confidence 45566 446676655 556889999999999974 44566666 4444 68888764 56899999999
Q ss_pred CCCeEEEeecCC---CcccccCCcCCHHHHHHHHhc----CC------CCceEeeccccccccccCCc--cEEEEEeeCC
Q 015368 230 KRPALIFLHLEA---GKATPFRHQFTRLAIANFVTH----TK------HPLVVTLTIHNAQFVFQDPR--KQLWLFAPAY 294 (408)
Q Consensus 230 ~~p~l~~~~~~~---~~~~~y~g~~~~~~i~~fi~~----~~------~p~v~~lt~~~~~~~~~~~~--~~~i~f~~~~ 294 (408)
++|++++|+.+. .....+.|..+.++|.+||.+ +. .|.+..++..++..++.... +++++|.+.+
T Consensus 89 ~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~ 168 (519)
T 3t58_A 89 GFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFERED 168 (519)
T ss_dssp SBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTT
T ss_pred ccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCc
Confidence 699999999632 233455666788888888764 22 13345556667766665543 6777888664
Q ss_pred CchHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCccccC
Q 015368 295 GSDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVL 359 (408)
Q Consensus 295 ~~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~ 359 (408)
. ...++++..+... +++.+..++..+ ..+++.||++. .|.+++++.+|+.-.+
T Consensus 169 s-----~~~~~~~ldl~~~-~~v~v~~v~~~~----~~l~~kfgV~~--~Pslvl~~~nGk~~~~ 221 (519)
T 3t58_A 169 S-----YLGREVTLDLSQY-HAVAVRRVLNTE----SDLVNKFGVTD--FPSCYLLLRNGSVSRV 221 (519)
T ss_dssp C-----CHHHHHHHHTTTC-TTEEEEEEETTC----HHHHHHHTCCC--SSEEEEEETTSCEEEC
T ss_pred h-----HHHHHHHHHhhcc-CCeeEEEecCch----HHHHHHcCCCC--CCeEEEEeCCCceeec
Confidence 3 1456777777732 228888887542 47889999964 6898888876654433
No 256
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.72 E-value=3.9e-08 Score=73.54 Aligned_cols=96 Identities=20% Similarity=0.280 Sum_probs=74.9
Q ss_pred cccccChhHHHHHhcc--CCeEEEEEecCCCCcC---HHHHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeEE
Q 015368 164 TYSITTTDEAERILTV--ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (408)
Q Consensus 164 ~~~i~~~~~~~~~~~~--~~~~vi~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~ 235 (408)
+..|.|.+++++.+.. ++.+++.|+++||+++ .+.+..+++..+++.|+.+ .+.+++++|++. ++|+++
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~---~~PT~~ 78 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIA---CMPTFL 78 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCC---BSSEEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCC---eecEEE
Confidence 3567888999988854 5678888999999984 4456667766667888765 567899999999 599999
Q ss_pred EeecCCCcccccCCcCCHHHHHHHHhcCC
Q 015368 236 FLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (408)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (408)
+|+.+. ....+.| .+.++|.+||++|+
T Consensus 79 ~~~~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 79 FMKNGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp EEETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred EEECCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 998653 4456778 48899999998764
No 257
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=1.9e-08 Score=78.50 Aligned_cols=87 Identities=16% Similarity=0.149 Sum_probs=58.5
Q ss_pred hhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc---H----hHHHHcCCCcCcEEEEEe
Q 015368 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~---~----~~~~~~~i~~~Pt~~~~~ 135 (408)
.+.++..+..++ ++| |+++||++|+.+.+.++++. +.+..+|++.+ + .+++.+++.++|+++ .
T Consensus 17 ~~~~~~~i~~~~-vvv-f~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i 86 (130)
T 2cq9_A 17 VNQIQETISDNC-VVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 86 (130)
T ss_dssp HHHHHHHHHHSS-EEE-EECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--E
T ss_pred HHHHHHHHcCCc-EEE-EEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--E
Confidence 445666665553 433 99999999999999988753 44566777654 3 378889999999984 4
Q ss_pred CCeEeEEee---CCCCHHHHHHHHHhH
Q 015368 136 AGVRQFQFF---GERTRDVISAWVREK 159 (408)
Q Consensus 136 ~g~~~~~~~---g~~~~~~l~~~i~~~ 159 (408)
+|+.+..+. +......|.++|...
T Consensus 87 ~G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 87 NGTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp TTEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred CCEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 886554432 223344566666554
No 258
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.67 E-value=8.2e-08 Score=81.45 Aligned_cols=109 Identities=14% Similarity=0.102 Sum_probs=76.6
Q ss_pred CCCCCCCCccCCCcEEcChhhHHHHHcCCCcEEEEEecCC-ChhHH-----hhhHHHHHHHHHhcCCcEEEEEeCcc---
Q 015368 45 NNNHTWPLLYAKDVVSLNGKNFSEFMGKNRNVMVMFYANW-CYWSK-----KLAPEFAAAAKMLKGEADLVMVDAYL--- 115 (408)
Q Consensus 45 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~f~a~w-C~~C~-----~~~p~~~~~~~~~~~~v~~~~v~~~~--- 115 (408)
..|..+|.+ .+...+++.+...-..+++++|+||+.| |++|. .+++.|.+. + .++.++.|++|.
T Consensus 23 ~vG~~APdF---tL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~Ds~~~ 95 (224)
T 3keb_A 23 RKGDYLPSF---MLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITVDSPSS 95 (224)
T ss_dssp CTTCBCCCC---EEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEESSCHHH
T ss_pred CCCCCCCCe---EEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEECCCHHH
Confidence 344455544 2344444444322236789999999999 99999 888888777 4 468888887642
Q ss_pred --------------------cHhHHHHcCCCc---------CcEEEEEe-CCeEeEEee-----CCCCHHHHHHHHHhHh
Q 015368 116 --------------------EKDLAKEYNILA---------YPTLYLFV-AGVRQFQFF-----GERTRDVISAWVREKM 160 (408)
Q Consensus 116 --------------------~~~~~~~~~i~~---------~Pt~~~~~-~g~~~~~~~-----g~~~~~~l~~~i~~~~ 160 (408)
+..+++.||+.. .|++++++ +|++...+. +..+.+++.+.|+...
T Consensus 96 ~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 96 LARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp HHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 356888999874 79999998 997776554 3466788888776554
No 259
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.62 E-value=6.9e-09 Score=79.05 Aligned_cols=62 Identities=11% Similarity=0.055 Sum_probs=46.1
Q ss_pred cEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccH-------hHHHHcCCCcCcEEEEEeCCeEeE
Q 015368 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNILAYPTLYLFVAGVRQF 141 (408)
Q Consensus 75 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~-------~~~~~~~i~~~Pt~~~~~~g~~~~ 141 (408)
..++.|+++||++|+.+.+.++++...+. + +..+|++.++ ++.+.+|+.++|++++ +|+.+.
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ig 87 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKRG-A--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSIG 87 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCTT-S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEEE
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCcC-c--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEEe
Confidence 35777999999999999998876432211 1 7788888764 6888999999998743 786543
No 260
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.59 E-value=3.9e-08 Score=78.11 Aligned_cols=86 Identities=16% Similarity=0.163 Sum_probs=56.3
Q ss_pred hhhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc---H----hHHHHcCCCcCcEEEEEe
Q 015368 63 GKNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~---~----~~~~~~~i~~~Pt~~~~~ 135 (408)
...++..+..+ .++| |+++||++|+.+.+.++++. +.+..+|++.+ + .+++.+|+.++|+++ .
T Consensus 39 ~~~~~~~i~~~-~Vvv-f~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i 108 (146)
T 2ht9_A 39 VNQIQETISDN-CVVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 108 (146)
T ss_dssp HHHHHHHHHHC-SEEE-EECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--E
T ss_pred HHHHHHHhcCC-CEEE-EECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--E
Confidence 35566666555 3444 99999999999999988753 44556666654 3 378899999999984 4
Q ss_pred CCeEeEEee---CCCCHHHHHHHHHh
Q 015368 136 AGVRQFQFF---GERTRDVISAWVRE 158 (408)
Q Consensus 136 ~g~~~~~~~---g~~~~~~l~~~i~~ 158 (408)
+|+.+..+. +......|.++|..
T Consensus 109 ~G~~igG~d~l~~l~~~g~L~~~L~~ 134 (146)
T 2ht9_A 109 NGTFIGGATDTHRLHKEGKLLPLVHQ 134 (146)
T ss_dssp TTEEEESHHHHHHHHHTTCHHHHHHH
T ss_pred CCEEEeCchHHHHHHHcChHHHHHHH
Confidence 886543321 11223345555544
No 261
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.51 E-value=5.3e-07 Score=75.46 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=37.6
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~ 113 (408)
.+++++|.||+.||++|+.+.|.+.++.+.+.+++.|..+.+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 468899999999999999999999999999887788877765
No 262
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.51 E-value=1.1e-06 Score=71.56 Aligned_cols=117 Identities=14% Similarity=0.174 Sum_probs=89.7
Q ss_pred HHHHHhcCCCCceEeeccccccccccCCc--cEEEEEee--------CCC-chHHHHHHHHHHHHhc-----CCcceEEE
Q 015368 256 IANFVTHTKHPLVVTLTIHNAQFVFQDPR--KQLWLFAP--------AYG-SDKVILTFEEVAKALK-----GKVNMLLH 319 (408)
Q Consensus 256 i~~fi~~~~~p~v~~lt~~~~~~~~~~~~--~~~i~f~~--------~~~-~~~~~~~~~~vA~~~~-----~~~~~i~f 319 (408)
+.+++....-..+.++|.++|..+...+. ++++.|.. ||. |+.+...|+++|+++. ++ +.|
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~---v~f 84 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSL---NLF 84 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCC---EEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCC---EEE
Confidence 34455555556788999999998875433 67777776 776 9999999999999998 78 999
Q ss_pred EEEEcCCcccccchhhhccCCCCCCcEEEEEcc-CCcc-----------cc--CC-C-CCChHHHHHHHHHHhcCcc
Q 015368 320 VYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DAKK-----------YV--LN-G-ELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 320 ~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~-~~~~-----------y~--~~-~-~~~~~~i~~Fi~~~~~gk~ 380 (408)
+.+|.++ ++.+.+.|||.. .|.++++.. ++.. +. +. + ..+.+.|.+||.+-..-++
T Consensus 85 ~kvD~d~---~~~la~~~~I~s--iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i 156 (178)
T 3ga4_A 85 FTVDVNE---VPQLVKDLKLQN--VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISI 156 (178)
T ss_dssp EEEETTT---CHHHHHHTTCCS--SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCC
T ss_pred EEEECcc---CHHHHHHcCCCC--CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCc
Confidence 9999987 568999999954 688888876 2222 33 33 4 6888999999998776444
No 263
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.49 E-value=3.4e-07 Score=76.83 Aligned_cols=42 Identities=17% Similarity=0.322 Sum_probs=36.2
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~ 113 (408)
.++++++.||.+||++|+.+.|.+.++.+.+++++.+..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 467899999999999999999999999999877777766654
No 264
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.48 E-value=8.5e-07 Score=76.45 Aligned_cols=97 Identities=10% Similarity=0.205 Sum_probs=81.2
Q ss_pred CcccccChhHHHHHhccCCeEEEEEec--CCCCcCHHHHHHHh-ccC--CceeEEEec--------CHhHHhhcCCC--C
Q 015368 163 GTYSITTTDEAERILTVESKLVLGFLH--DLEGMESEELAAAS-KLH--SDVNFYQTT--------SADVAEFFHIH--P 227 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~vi~f~~--~~~~~~~~~~~~~a-~~~--~~~~f~~~~--------~~~l~~~~~i~--~ 227 (408)
.+..+ +.++++..+..+..++|.|+. +||+ ..+.|..++ .+. +++.|+.+. +.+++++|+|. .
T Consensus 6 ~v~~L-t~~nF~~~i~~~~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~ 83 (240)
T 2qc7_A 6 GALPL-DTVTFYKVIPKSKFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKES 83 (240)
T ss_dssp TCEEC-CTTHHHHHGGGCSEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGG
T ss_pred CceEC-CHHHHHHHHcCCCCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCC
Confidence 35556 457888888888899999999 9999 888888887 443 578898876 67899999998 6
Q ss_pred CCCCCeEEEeecCC-CcccccCCcCCHHHHHHHHhcCC
Q 015368 228 KSKRPALIFLHLEA-GKATPFRHQFTRLAIANFVTHTK 264 (408)
Q Consensus 228 ~~~~p~l~~~~~~~-~~~~~y~g~~~~~~i~~fi~~~~ 264 (408)
+|++++|+.+. .....|.|..+.++|.+||..+.
T Consensus 84 ---~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 84 ---YPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp ---CSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred ---CCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 89999999875 35779999999999999999886
No 265
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.48 E-value=1.1e-06 Score=68.14 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=75.7
Q ss_pred CCCcccccChhHHHHHhc-cCCeEEEEEecCCCCcCH---HHHHHHhc------cCCceeEEEe---cCHhHHhhcCCCC
Q 015368 161 TLGTYSITTTDEAERILT-VESKLVLGFLHDLEGMES---EELAAASK------LHSDVNFYQT---TSADVAEFFHIHP 227 (408)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~-~~~~~vi~f~~~~~~~~~---~~~~~~a~------~~~~~~f~~~---~~~~l~~~~~i~~ 227 (408)
...+..+ +.++++..+. .++.++|.|+++||.++. +.+..+++ ..+.+.|+.+ .+.++++++++.
T Consensus 14 ~~~v~~l-~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~- 91 (127)
T 3h79_A 14 PSRVVEL-TDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVS- 91 (127)
T ss_dssp CCCCEEC-CTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCC-
T ss_pred CCceEEC-ChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCc-
Confidence 3456666 5577887774 588999999999998743 44555542 3456888776 467899999999
Q ss_pred CCCCCeEEEeecCCCc-ccccCCcCCHHHHHHHHhcC
Q 015368 228 KSKRPALIFLHLEAGK-ATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 228 ~~~~p~l~~~~~~~~~-~~~y~g~~~~~~i~~fi~~~ 263 (408)
++|++++|+.++.. +..|.|..+.++|.+||.++
T Consensus 92 --~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 92 --GFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp --SSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred --cCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 69999999877543 37899999999999999864
No 266
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=98.46 E-value=3.9e-07 Score=76.68 Aligned_cols=110 Identities=18% Similarity=0.239 Sum_probs=79.3
Q ss_pred CCCCCCCCccCCC-----cEEcChhhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc--
Q 015368 45 NNNHTWPLLYAKD-----VVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL-- 115 (408)
Q Consensus 45 ~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~-- 115 (408)
..|+.+|++.-.. ...++-.+| .+|++++.|| +.||+.|..+++.|.+.+++++. ++.++.|++|.
T Consensus 24 ~VG~~APdF~l~a~~d~~~~~vsLsd~-----~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~ 98 (216)
T 3sbc_A 24 QVQKQAPTFKKTAVVDGVFDEVSLDKY-----KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEY 98 (216)
T ss_dssp CTTSBCCCCCEEEEETTEEEEECGGGG-----TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHH
T ss_pred hcCCcCCCCCCcceECCCCcEEehHHh-----CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchh
Confidence 4556777764222 223333322 5789999999 99999999999999999999976 89999998863
Q ss_pred --------------------------cHhHHHHcCCC------cCcEEEEEe-CCeEeEEe--e--CCCCHHHHHHHHHh
Q 015368 116 --------------------------EKDLAKEYNIL------AYPTLYLFV-AGVRQFQF--F--GERTRDVISAWVRE 158 (408)
Q Consensus 116 --------------------------~~~~~~~~~i~------~~Pt~~~~~-~g~~~~~~--~--g~~~~~~l~~~i~~ 158 (408)
+.++++.||+- ..+.+++++ +|.+.... . -.++.+++.+.|+.
T Consensus 99 sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 99 SLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEA 178 (216)
T ss_dssp HHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 24678889873 368899998 88654322 2 34688888877754
Q ss_pred H
Q 015368 159 K 159 (408)
Q Consensus 159 ~ 159 (408)
.
T Consensus 179 l 179 (216)
T 3sbc_A 179 F 179 (216)
T ss_dssp H
T ss_pred h
Confidence 3
No 267
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.45 E-value=5e-07 Score=65.64 Aligned_cols=70 Identities=9% Similarity=0.081 Sum_probs=52.2
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc-----cc----HhHHHHcCCCcCcEEEEEeCCeEeEEeeCC
Q 015368 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----LE----KDLAKEYNILAYPTLYLFVAGVRQFQFFGE 146 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~-----~~----~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~ 146 (408)
.++.|+++||++|++..+.++++. +.+-.+|++ +. .++.+.+++.++|++++ +|+ +.|.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~----~i~G 80 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK----HVLG 80 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE----EEES
T ss_pred eEEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE----EEeC
Confidence 366799999999999998887753 344455555 33 56778899999999976 773 2344
Q ss_pred CCHHHHHHHHH
Q 015368 147 RTRDVISAWVR 157 (408)
Q Consensus 147 ~~~~~l~~~i~ 157 (408)
.+.+.|.+++.
T Consensus 81 ~~~~~l~~~l~ 91 (92)
T 3ic4_A 81 YNEEKLKELIR 91 (92)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHhc
Confidence 68999998875
No 268
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.44 E-value=4.1e-07 Score=72.19 Aligned_cols=81 Identities=16% Similarity=0.237 Sum_probs=62.7
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC--------------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA-------------------------------------- 113 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~-------------------------------------- 113 (408)
+++.+++.|..++|++|+++.+.++++ . ++.+.....
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~-~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T-DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C-SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C-ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 468899999999999999999998754 2 444443321
Q ss_pred --------cccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 114 --------YLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 114 --------~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+++.++++++||+++||+++ .+|+ .+.|..+.+.|.++|.+...
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHHHHHHHHTSC
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHHHHHHHHHHH
Confidence 11345788999999999988 7784 47899999999999987653
No 269
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.42 E-value=1.5e-06 Score=71.40 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=61.6
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHh--cCCcEEEEEeCcc----------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML--KGEADLVMVDAYL---------------------------------- 115 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~--~~~v~~~~v~~~~---------------------------------- 115 (408)
.++++++.|+..|||+|+.+.|.+.++.+++ .+++.+......-
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~ 105 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 105 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcC
Confidence 4578899999999999999999999998888 5566666544310
Q ss_pred --------------------------------cHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHH
Q 015368 116 --------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (408)
Q Consensus 116 --------------------------------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (408)
+..+++++||.|+||+++ +|+ .+.|..+.+.|.+.|.
T Consensus 106 ~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~a~~~gv~gtPt~vv--ng~---~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 106 DEWGNLTLEEVATYAEKNLGLKEQKDATLVSAVIAEANAAHIQFVPTIII--GEY---IFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCCCCHHHHHHHHHHHHHHTCCSSCEEEE--TTE---EECTTCCHHHHHHHHT
T ss_pred hhhccCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHcCCCCcCeEEE--CCE---EccCCCCHHHHHHHhc
Confidence 112356789999999654 785 4579899999888774
No 270
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.41 E-value=6.5e-07 Score=67.08 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=83.3
Q ss_pred CCceEeeccccccccccCCccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCC
Q 015368 265 HPLVVTLTIHNAQFVFQDPRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGN 342 (408)
Q Consensus 265 ~p~v~~lt~~~~~~~~~~~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 342 (408)
.+.+..++.+++......+.+.++. +.+++. |....+.+.+++.++.++ +.|+.+|++.. +.+++.|++..
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~i~~- 75 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK---AVFGRLNVDEN---QKIADKYSVLN- 75 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTC---HHHHHHTTCCS-
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC---ceEEEEccccC---HHHHHhcCccc-
Confidence 3567889999999888777766554 555665 899999999999999988 99999998864 57889999954
Q ss_pred CCcEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 343 APRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 343 ~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
.|.++++..+.....+.|..+.+++.+|+++++
T Consensus 76 -~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 76 -IPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp -SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred -CCEEEEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 688887744444455788889999999999875
No 271
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.40 E-value=1.9e-06 Score=66.97 Aligned_cols=103 Identities=21% Similarity=0.198 Sum_probs=82.1
Q ss_pred ceEeeccccccc-cccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 267 LVVTLTIHNAQF-VFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 267 ~v~~lt~~~~~~-~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
.+..++.+++.. +...+.++++ ++.+||. |+...+.+.++++++.++ +.|+.+|++.. ..+++.|++. .
T Consensus 18 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~---~~l~~~~~v~--~ 89 (130)
T 2dml_A 18 DVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV---VKVGAVNADKH---QSLGGQYGVQ--G 89 (130)
T ss_dssp SSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT---SEEEEEETTTC---HHHHHHHTCC--S
T ss_pred CcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc---eEEEEEeCCCC---HHHHHHcCCC--c
Confidence 467888888887 4444555555 5556776 999999999999999988 99999998864 4788999995 4
Q ss_pred CcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhc
Q 015368 344 PRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 344 ~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
.|.+++++.++. ...+.|..+.+++.+|+.+.+.
T Consensus 90 ~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 90 FPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp SSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 789999887555 6678899999999999988764
No 272
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.38 E-value=3.2e-07 Score=70.05 Aligned_cols=70 Identities=11% Similarity=0.256 Sum_probs=50.5
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHHhh-hHHHHHHHHHhcCCcEEEEEeCcccH-------hHHHHcCCCcCcEEEEEe
Q 015368 64 KNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~~v~~~~v~~~~~~-------~~~~~~~i~~~Pt~~~~~ 135 (408)
+.+++.+..++ ++.|+++||++|+.. .+.+++... ..+.+..+|++.++ ++.+.+|+.++|++ |.
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi 88 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YI 88 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 34555665443 555999999999998 777765431 13788888888764 58888999999987 55
Q ss_pred CCeEe
Q 015368 136 AGVRQ 140 (408)
Q Consensus 136 ~g~~~ 140 (408)
+|+.+
T Consensus 89 ~g~~i 93 (118)
T 3c1r_A 89 NGKHI 93 (118)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88554
No 273
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=1.4e-06 Score=67.40 Aligned_cols=105 Identities=14% Similarity=0.079 Sum_probs=83.0
Q ss_pred CceEeeccccccccccCCccEEEEEeeCCC-chHHHHHHHHHHHHhcC-CcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 266 PLVVTLTIHNAQFVFQDPRKQLWLFAPAYG-SDKVILTFEEVAKALKG-KVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 266 p~v~~lt~~~~~~~~~~~~~~~i~f~~~~~-~~~~~~~~~~vA~~~~~-~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
..+..++.+++..+.... .++.++.++|. |......+.++++++.+ + +.|+.+|++.. ..+++.|++..
T Consensus 7 ~~v~~l~~~~f~~~~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~---v~~~~vd~~~~---~~~~~~~~v~~-- 77 (126)
T 1x5e_A 7 GNVRVITDENWRELLEGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLE---VNIAKVDVTEQ---PGLSGRFIINA-- 77 (126)
T ss_dssp CSEEECCTTTHHHHTSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGT---CEEEEEETTTC---HHHHHHTTCCS--
T ss_pred CccEEecHHHHHHHhCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCC---eEEEEEECcCC---HHHHHHcCCcc--
Confidence 457788999988876553 44556667776 99999999999999985 6 99999998864 47889999953
Q ss_pred CcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCcc
Q 015368 344 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 344 ~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
.|.++++. +|+...+.|..+.+++.+|+++.+...+
T Consensus 78 ~Pt~~~~~-~G~~~~~~G~~~~~~l~~~l~~~~~~~~ 113 (126)
T 1x5e_A 78 LPTIYHCK-DGEFRRYQGPRTKKDFINFISDKEWKSI 113 (126)
T ss_dssp SSEEEEEE-TTEEEECCSCCCHHHHHHHHHTCGGGGS
T ss_pred cCEEEEEe-CCeEEEeecCCCHHHHHHHHHHHhhccC
Confidence 68888874 4566678899999999999998876554
No 274
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.38 E-value=1.2e-06 Score=69.09 Aligned_cols=88 Identities=20% Similarity=0.346 Sum_probs=71.9
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCccccCC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLN 360 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~~ 360 (408)
+.++++ ++.+||. |......+.+++.++.++ +.|+.+|++.. ..+++.||+. ..|.+++++.+++...+.
T Consensus 51 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~--~~Pt~~~~~~~g~~~~~~ 122 (141)
T 3hxs_A 51 DKPAIVDFYADWCGPCKMVAPILEELSKEYAGK---IYIYKVNVDKE---PELARDFGIQ--SIPTIWFVPMKGEPQVNM 122 (141)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHHHHHTTCC--SSSEEEEECSSSCCEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc---eEEEEEECCCC---HHHHHHcCCC--CcCEEEEEeCCCCEEEEe
Confidence 445554 5566776 999999999999999988 99999999864 5888999995 478999987766656778
Q ss_pred CCCChHHHHHHHHHHhcC
Q 015368 361 GELTLSSIKSFGEEFLED 378 (408)
Q Consensus 361 ~~~~~~~i~~Fi~~~~~g 378 (408)
|..+.++|.+||+.++..
T Consensus 123 G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 123 GALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp SCCCHHHHHHHHHHTTC-
T ss_pred CCCCHHHHHHHHHHHHcc
Confidence 889999999999998764
No 275
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.38 E-value=1.1e-06 Score=65.42 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=79.6
Q ss_pred ceEeeccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 267 LVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 267 ~v~~lt~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
.+.+++.+++.... .+.+.++ ++.+++. |....+.+.++++++.++ +.|+.+|++.. +.+++.|++.. .
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~--~ 74 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK---ADILKLDVDEN---PSTAAKYEVMS--I 74 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHHHHHTTCCS--B
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEECCcC---HHHHHhCCCcc--c
Confidence 46778999988887 5555555 5556666 899999999999999998 99999998864 57889999954 6
Q ss_pred cEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 345 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
|.+++++.+.....+.|..+.+++.+|+++++
T Consensus 75 Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 75 PTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred CEEEEEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 88888864434456788889999999998753
No 276
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.37 E-value=7.8e-07 Score=66.95 Aligned_cols=102 Identities=18% Similarity=0.246 Sum_probs=80.2
Q ss_pred eEeeccccccccc-cCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 268 VVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 268 v~~lt~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
+..++.+++.... ..+.+.++ ++.+++. |....+.+.++++++.++ +.|+.+|++.. +.+++.|++.. .
T Consensus 6 v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~---v~~~~vd~~~~---~~l~~~~~v~~--~ 77 (111)
T 3gnj_A 6 LEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES---FGFYYVDVEEE---KTLFQRFSLKG--V 77 (111)
T ss_dssp SEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTTC---HHHHHHTTCCS--S
T ss_pred ceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc---eEEEEEECCcC---hhHHHhcCCCc--C
Confidence 5677888888877 55555555 4556666 899999999999999988 99999999874 57889999954 6
Q ss_pred cEEEEEccCCccccCCCCCChHHHHHHHHHHhc
Q 015368 345 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
|.++++..+.....+.|..+.+.+.+|+++.+.
T Consensus 78 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 78 PQILYFKDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp CEEEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 888887543344457888899999999998864
No 277
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.36 E-value=2e-06 Score=69.97 Aligned_cols=81 Identities=10% Similarity=0.105 Sum_probs=60.3
Q ss_pred HHHHHcCCCcEEEEEecCCChhHHh-hhHHHHHHHHHhcC-Cc-EEEEEeCcc-----------------------cHhH
Q 015368 66 FSEFMGKNRNVMVMFYANWCYWSKK-LAPEFAAAAKMLKG-EA-DLVMVDAYL-----------------------EKDL 119 (408)
Q Consensus 66 ~~~~~~~~~~~~v~f~a~wC~~C~~-~~p~~~~~~~~~~~-~v-~~~~v~~~~-----------------------~~~~ 119 (408)
+.+.+..++.+|+.||+.||+.|.. ++|.|.+.+++++. ++ .++.|.+|. +.++
T Consensus 41 Lsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~v 120 (176)
T 4f82_A 41 VRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAF 120 (176)
T ss_dssp HHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHH
T ss_pred HHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCchHH
Confidence 4444444445677888999999999 99999999999976 78 888888753 3457
Q ss_pred HHHcCCC-----------cCcEEEEEeCCeEeEEeeCC
Q 015368 120 AKEYNIL-----------AYPTLYLFVAGVRQFQFFGE 146 (408)
Q Consensus 120 ~~~~~i~-----------~~Pt~~~~~~g~~~~~~~g~ 146 (408)
++.||+. ..|+++++++|++...+.++
T Consensus 121 a~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~ 158 (176)
T 4f82_A 121 THALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEA 158 (176)
T ss_dssp HHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECC
T ss_pred HHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcC
Confidence 7888773 24777777999877666643
No 278
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.35 E-value=5.3e-07 Score=71.25 Aligned_cols=115 Identities=14% Similarity=0.224 Sum_probs=87.8
Q ss_pred CceEeecccccc-ccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCC
Q 015368 266 PLVVTLTIHNAQ-FVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGN 342 (408)
Q Consensus 266 p~v~~lt~~~~~-~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 342 (408)
+.+..++.+++. .+...+.++++ ++.+||. |....+.+.++++++.++ +.|+.+|++.. ..+++.|++..
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~---~~l~~~~~v~~- 78 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS---AVFGRINIATN---PWTAEKYGVQG- 78 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTC---HHHHHHHTCCE-
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc---eEEEEEECCcC---HhHHHHCCCCc-
Confidence 457888989888 55555666555 4556676 999999999999999998 99999999864 58889999954
Q ss_pred CCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCcc--ccccccCc
Q 015368 343 APRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL--LNQSDQIS 388 (408)
Q Consensus 343 ~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk~--~~kse~iP 388 (408)
.|.++++..+.....+.|..+.+.|.+||+.++.... ..++.++.
T Consensus 79 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~~~~~~~ 125 (140)
T 3hz4_A 79 -TPTFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQHGEECIRKSTPVG 125 (140)
T ss_dssp -ESEEEEEETTEEEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSBC--
T ss_pred -CCEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhcccccCcccccccC
Confidence 6788888544444467888899999999999987655 44455443
No 279
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.35 E-value=1.1e-06 Score=65.50 Aligned_cols=67 Identities=22% Similarity=0.369 Sum_probs=49.6
Q ss_pred hhHHHHHcCCCcEEEEEec-----CCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHh----HHHHcCCCcCcEEEEE
Q 015368 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLF 134 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a-----~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~i~~~Pt~~~~ 134 (408)
+.++..+..+ .++| |++ +||++|++..+.+.+. ++.+..+|++++++ +.+.+|+.++|++ |
T Consensus 8 ~~~~~~i~~~-~vvv-f~~g~~~~~~C~~C~~~~~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~ 77 (105)
T 2yan_A 8 ERLKVLTNKA-SVML-FMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL--Y 77 (105)
T ss_dssp HHHHHHHTSS-SEEE-EESBCSSSBCTTHHHHHHHHHHHH------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--E
T ss_pred HHHHHHhccC-CEEE-EEecCCCCCCCccHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE--E
Confidence 4456666555 4554 676 9999999999988775 37788899988766 4556899999998 4
Q ss_pred eCCeEe
Q 015368 135 VAGVRQ 140 (408)
Q Consensus 135 ~~g~~~ 140 (408)
.+|+.+
T Consensus 78 i~g~~i 83 (105)
T 2yan_A 78 VKGELV 83 (105)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 578543
No 280
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.35 E-value=2.1e-06 Score=71.05 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=67.1
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc--c----------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--L---------------------------------- 115 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~--~---------------------------------- 115 (408)
.+++++|.|+.-.||+|+++.|.+.++.+++.+++.+..+... .
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~~~ 99 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTL 99 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999998876666654421 0
Q ss_pred ---------------------------------------cHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHH
Q 015368 116 ---------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (408)
Q Consensus 116 ---------------------------------------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (408)
+...++++||+|+||+++ ||+.+....|..+.+++.+.|
T Consensus 100 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 100 RKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYFDLV 177 (184)
T ss_dssp CCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHHHHH
Confidence 113457789999999876 886555556678888888888
Q ss_pred HhHh
Q 015368 157 REKM 160 (408)
Q Consensus 157 ~~~~ 160 (408)
+.++
T Consensus 178 ~~Ll 181 (184)
T 4dvc_A 178 NYLL 181 (184)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7654
No 281
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.35 E-value=2.7e-06 Score=64.31 Aligned_cols=104 Identities=15% Similarity=0.180 Sum_probs=79.9
Q ss_pred ceEeeccccccccc-cCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 267 LVVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 267 ~v~~lt~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
.+..++.+++.... ..+.+.++ ++.+++. |....+.+.+++.++.++ +.|+.+|++.. +.+++.|++..
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~---~~~~~~~~v~~-- 79 (115)
T 1thx_A 8 GVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR---LKVVKLEIDPN---PTTVKKYKVEG-- 79 (115)
T ss_dssp SEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT---CEEEEEESTTC---HHHHHHTTCCS--
T ss_pred ceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc---EEEEEEEcCCC---HHHHHHcCCCc--
Confidence 47788888887654 45555555 4556666 999999999999999988 99999998864 47889999954
Q ss_pred CcEEEEEccCCccccCCCCCChHHHHHHHHHHhcC
Q 015368 344 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 344 ~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
.|.++++..+...+.+.|..+.+.+.+|++.++.+
T Consensus 80 ~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 80 VPALRLVKGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred eeEEEEEcCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 68888874333344577888999999999998865
No 282
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.35 E-value=2.4e-06 Score=66.26 Aligned_cols=102 Identities=18% Similarity=0.275 Sum_probs=78.3
Q ss_pred eEeeccccccc-cccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 268 VVTLTIHNAQF-VFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 268 v~~lt~~~~~~-~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
+..++.+++.. +...+.+.++ ++.+|+. |......+.++++++.++ +.|+.+|++.. ..+++.|++.. .
T Consensus 24 v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~~~~---~~l~~~~~v~~--~ 95 (128)
T 2o8v_B 24 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK---LTVAKLNIDQN---PGTAPKYGIRG--I 95 (128)
T ss_dssp SEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT---EEEEEEETTTC---CTTSGGGTCCS--S
T ss_pred cEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCC---HHHHHHcCCCc--c
Confidence 56788888874 3445555555 5556676 899999999999999988 99999999864 47889999954 6
Q ss_pred cEEEEEccCCccccCCCCCChHHHHHHHHHHhc
Q 015368 345 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
|.++++..+...+.+.|..+.+++.+|++++++
T Consensus 96 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 96 PTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CEEEEEeCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 888887433334557888899999999998763
No 283
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.34 E-value=4.8e-06 Score=62.18 Aligned_cols=102 Identities=18% Similarity=0.246 Sum_probs=78.2
Q ss_pred ceEeeccccccc-cccCCccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 267 LVVTLTIHNAQF-VFQDPRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 267 ~v~~lt~~~~~~-~~~~~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
.+.+++.+++.. +...+.+.++. +.+++. |....+.+.++++++.++ +.|+.+|++.. +.+++.||+..
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~-- 74 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQN---PGTAPKYGIRG-- 74 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTC---TTHHHHTTCCS--
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC---cEEEEEECCCC---HHHHHHcCCcc--
Confidence 467788888874 44455565554 445665 899999999999999988 99999998864 47889999954
Q ss_pred CcEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 344 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 344 ~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
.|.++++..+.....+.|..+.+++.+|+++.+
T Consensus 75 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 75 IPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cCEEEEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 688887743333445778889999999999876
No 284
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.34 E-value=2.1e-06 Score=74.20 Aligned_cols=98 Identities=12% Similarity=0.154 Sum_probs=78.9
Q ss_pred CCcccccChhHHHHHhccCCeEEEEEe--cCCCCcCHHHHHHHh-cc---CCceeEEEec--------CHhHHhhcCCC-
Q 015368 162 LGTYSITTTDEAERILTVESKLVLGFL--HDLEGMESEELAAAS-KL---HSDVNFYQTT--------SADVAEFFHIH- 226 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~vi~f~--~~~~~~~~~~~~~~a-~~---~~~~~f~~~~--------~~~l~~~~~i~- 226 (408)
..+..+ +.++++.++..+..++|.|+ ++||+ ..+.|..+| .+ ..++.|+.+. +.+++++|+|.
T Consensus 16 ~~v~~L-t~~nF~~vi~~~~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~ 93 (248)
T 2c0g_A 16 TGCVDL-DELSFEKTVERFPYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDD 93 (248)
T ss_dssp TTCEEC-CTTTHHHHHTTSSEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCT
T ss_pred CCcEEC-CHHHHHHHHhcCCCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCc
Confidence 345555 55778888888889999999 99999 888888887 44 4578888763 57899999998
Q ss_pred -CCCCCCeEEEeecCC-Cccccc--CCcCCHHHHHHHHhcCCC
Q 015368 227 -PKSKRPALIFLHLEA-GKATPF--RHQFTRLAIANFVTHTKH 265 (408)
Q Consensus 227 -~~~~~p~l~~~~~~~-~~~~~y--~g~~~~~~i~~fi~~~~~ 265 (408)
. +|++++|+ +. .....| .|..+.++|.+||..+.-
T Consensus 94 ~~---~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 94 KN---FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp TS---CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CC---CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 5 89999999 65 346788 899999999999997653
No 285
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.34 E-value=7.3e-07 Score=74.36 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=35.1
Q ss_pred CCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeC
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA 113 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~ 113 (408)
.++++|.||+.|||+|+.+.|.+ .++.+.+.+++.|..++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 57 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHV 57 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEEC
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEec
Confidence 46899999999999999999987 688888877787777775
No 286
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.34 E-value=8.2e-07 Score=64.04 Aligned_cols=56 Identities=11% Similarity=0.325 Sum_probs=45.4
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc--ccHhHHHHc-CCCcCcEEEEEeCCeE
Q 015368 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--LEKDLAKEY-NILAYPTLYLFVAGVR 139 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~--~~~~~~~~~-~i~~~Pt~~~~~~g~~ 139 (408)
.++.|+++||++|+...+.+++. ++.+..+|++ ...++.+.+ ++.++|+++ .+|+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 46789999999999999888764 3677888888 556788889 999999984 37853
No 287
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.34 E-value=1.1e-06 Score=73.03 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=64.4
Q ss_pred CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc--------------------c-----------------
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY--------------------L----------------- 115 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~--------------------~----------------- 115 (408)
+++++|.|++.||+||+++.|.+.++.+.+ ++.|..+.+. .
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~~~~~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~ 99 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMG 99 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECCSSSHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEeccCCccchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999988 3555544431 0
Q ss_pred -----------------------------------------cHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHH
Q 015368 116 -----------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISA 154 (408)
Q Consensus 116 -----------------------------------------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 154 (408)
+...++++||+|+|++++ +|+......|..+.+.+.+
T Consensus 100 ~~~~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~~~~~~v~~~~~~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~ 177 (185)
T 3feu_A 100 EGTTLTEQQEAYSKAFTSRGLVSPYDFNEEQRDTLIKKVDNAKMLSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIAD 177 (185)
T ss_dssp TTSCHHHHHHHHHHHHHTTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHH
Confidence 001235678999999986 7866566689999999998
Q ss_pred HHHhHh
Q 015368 155 WVREKM 160 (408)
Q Consensus 155 ~i~~~~ 160 (408)
.|+..+
T Consensus 178 ~i~~ll 183 (185)
T 3feu_A 178 TIRYLL 183 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887664
No 288
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.33 E-value=3.8e-06 Score=70.17 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=35.4
Q ss_pred CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeC
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDA 113 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~ 113 (408)
++++++.||.+|||+|..+.|.+.++.+.+.+++.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 56799999999999999999999999999877777765554
No 289
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.32 E-value=1.9e-07 Score=78.26 Aligned_cols=45 Identities=9% Similarity=0.176 Sum_probs=41.3
Q ss_pred CCCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeCccc
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLE 116 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~~~~ 116 (408)
.+++++|.||+.||+||+.+.|.+ +++.+.+.+++.|..++++.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 357899999999999999999999 999999988999999999765
No 290
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.32 E-value=2.2e-06 Score=67.61 Aligned_cols=106 Identities=21% Similarity=0.236 Sum_probs=69.9
Q ss_pred CceEeeccccccccccCCccE-EEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 266 PLVVTLTIHNAQFVFQDPRKQ-LWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 266 p~v~~lt~~~~~~~~~~~~~~-~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
+.+.+++.+++......+..+ +.++.+++. |....+.+.+++.++.++ +.|+.+|++.. ..+++.|++..
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~---~~l~~~~~v~~-- 104 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR---LKVVKVNVDEH---PGLAARYGVRS-- 104 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTC---HHHHHHTTCCS--
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCCC---HHHHHHCCCCc--
Confidence 445677888877765444333 445556665 899999999999999988 99999998864 47888999953
Q ss_pred CcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCc
Q 015368 344 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 344 ~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
.|.++++..+.....+.|..+.+++.+||+.++.|+
T Consensus 105 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 105 VPTLVLFRRGAPVATWVGASPRRVLEERLRPYLEGR 140 (140)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHTCC
T ss_pred cCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHHccC
Confidence 688888754333455788889999999999999874
No 291
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.31 E-value=2.6e-06 Score=61.43 Aligned_cols=76 Identities=18% Similarity=0.285 Sum_probs=56.9
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHc-----CCCcCcEEEEEeCCeEeEEeeCCCCHH
Q 015368 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEY-----NILAYPTLYLFVAGVRQFQFFGERTRD 150 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~-----~i~~~Pt~~~~~~g~~~~~~~g~~~~~ 150 (408)
-++.|..+||++|++....+++ .++.|-.+|++++++..+.+ |.+++|+++ +.+|... +..+.+
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~l----~~~~~~ 73 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGSTL----TNPSAD 73 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCEE----ESCCHH
T ss_pred cEEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEEE----eCCCHH
Confidence 3677999999999998877765 26888899999887654332 788999974 4677442 234788
Q ss_pred HHHHHHHhHhCC
Q 015368 151 VISAWVREKMTL 162 (408)
Q Consensus 151 ~l~~~i~~~~~~ 162 (408)
++.++|.+..+-
T Consensus 74 el~~~L~el~gL 85 (92)
T 2lqo_A 74 EVKAKLVKIAGL 85 (92)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHhcCC
Confidence 999999888753
No 292
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.31 E-value=8e-06 Score=62.36 Aligned_cols=103 Identities=18% Similarity=0.236 Sum_probs=79.7
Q ss_pred CceEeeccccccccc-cCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcC-----CcceEEEEEEEcCCcccccchhhhc
Q 015368 266 PLVVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKG-----KVNMLLHVYVEMNSEGVGRRVSQEF 337 (408)
Q Consensus 266 p~v~~lt~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~-----~~~~i~f~~vd~~~~~~~~~l~~~~ 337 (408)
+.+..++.+++.... ..+.++++ ++.+|+. |+.....+.++++++.+ + +.|+.+|++... +++
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~---v~~~~vd~~~~~----~~~-- 77 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDR---VVIAKVDATAND----VPD-- 77 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTS---SEEEEEETTTSC----CSS--
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCc---eEEEEEECcccc----ccc--
Confidence 457888999988875 45555544 5667776 99999999999999987 6 999999998643 444
Q ss_pred cCCCCCCcEEEEEccCCc--cccCCCCCChHHHHHHHHHHhcCc
Q 015368 338 GVSGNAPRVIAYSARDAK--KYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~~--~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
++. ..|.+++++.+++ ...+.|..+.++|.+||++.+...
T Consensus 78 ~v~--~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 78 EIQ--GFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp CCS--SSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred ccC--cCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 663 4789998887545 667889999999999999887643
No 293
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.31 E-value=2.4e-06 Score=68.04 Aligned_cols=104 Identities=22% Similarity=0.267 Sum_probs=83.7
Q ss_pred ceEeeccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 267 LVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 267 ~v~~lt~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
.+..++.+++......+.++++ ++.+|+. |......++++++++.++ +.|+.+|++.. ..+++.|++.. .
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~~---~~l~~~~~v~~--~ 110 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK---VRFVKVNTEAE---PALSTRFRIRS--I 110 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHHHHHTTCCS--S
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc---eEEEEEECcCC---HHHHHHCCCCc--c
Confidence 4678889998888766666655 4556665 889999999999999988 99999998864 47889999954 6
Q ss_pred cEEEEEccCCccccCCCCCChHHHHHHHHHHhcC
Q 015368 345 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
|.++++..+.....+.|..+.++|.+||++.+..
T Consensus 111 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 111 PTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp SEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred CEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 8888886444445578999999999999998765
No 294
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.31 E-value=2e-06 Score=64.35 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=79.3
Q ss_pred eEeeccccccccccCCccEEEEEe-eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCc
Q 015368 268 VVTLTIHNAQFVFQDPRKQLWLFA-PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 345 (408)
Q Consensus 268 v~~lt~~~~~~~~~~~~~~~i~f~-~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p 345 (408)
+.+++.+++......+.+.++.|. +++. |....+.+.+++.++.++ +.|+.+|++.. ..+++.|++.. .|
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~--~P 74 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK---LLVAKLDVDEN---PKTAMRYRVMS--IP 74 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTC---HHHHHHTTCCS--SS
T ss_pred ceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc---eEEEEEECCCC---HhHHHhCCCCc--CC
Confidence 567888888877766666655544 5555 889999999999999988 99999998764 47889999954 68
Q ss_pred EEEEEccCCccccCCCCCChHHHHHHHHHHhcC
Q 015368 346 VIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 346 ~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
.++++..+.....+.|..+.+++.+|+++.+..
T Consensus 75 t~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 75 TVILFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EEEEEeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 888874333344577888999999999988764
No 295
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.31 E-value=2.4e-06 Score=66.99 Aligned_cols=103 Identities=21% Similarity=0.308 Sum_probs=78.9
Q ss_pred eEeecccccccccc------------CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccch
Q 015368 268 VVTLTIHNAQFVFQ------------DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRV 333 (408)
Q Consensus 268 v~~lt~~~~~~~~~------------~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l 333 (408)
+..++.+++..... .+.+.++ ++.+||. |......+.+++.++.++ +.|+.+|++.. ..+
T Consensus 11 v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~---~~l 84 (136)
T 2l5l_A 11 VIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ---IVIYKVDTEKE---QEL 84 (136)
T ss_dssp EEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHH
T ss_pred eEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---EEEEEEeCCCC---HHH
Confidence 45556565554332 3345554 5556676 999999999999999988 99999998864 478
Q ss_pred hhhccCCCCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcC
Q 015368 334 SQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 334 ~~~~~i~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
++.|++.. .|.+++++.+|+...+.|..+.++|.+||++.+..
T Consensus 85 ~~~~~v~~--~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 85 AGAFGIRS--IPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HHHTTCCS--SCEEEEECSSSCCEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHcCCCC--CCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhhc
Confidence 89999954 78999987666655677889999999999998776
No 296
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.30 E-value=2.4e-06 Score=64.53 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=79.6
Q ss_pred eEeeccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCc
Q 015368 268 VVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 345 (408)
Q Consensus 268 v~~lt~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p 345 (408)
+.+++.+++.... .+.+.++ ++.+++. |......+.++++++.++ +.|+.+|++.. ..+++.||+.. .|
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~---v~~~~vd~~~~---~~l~~~~~v~~--~P 73 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK---LKIVKIDVDEN---QETAGKYGVMS--IP 73 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT---CEEEEEETTTC---CSHHHHTTCCS--BS
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---cEEEEEECCCC---HHHHHHcCCCc--cc
Confidence 4678888888777 5555555 4556666 999999999999999988 99999998864 47889999953 68
Q ss_pred EEEEEccCCccccCCCCCChHHHHHHHHHHhcC
Q 015368 346 VIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 346 ~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
.++++..+...+.+.|..+.+++.+|+++.+..
T Consensus 74 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 74 TLLVLKDGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred EEEEEeCCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 888874333345678889999999999987654
No 297
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.29 E-value=6.5e-06 Score=67.32 Aligned_cols=90 Identities=9% Similarity=0.064 Sum_probs=71.7
Q ss_pred cCCCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeCcccH---------------hHHH---HcCCCcCc
Q 015368 71 GKNRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDAYLEK---------------DLAK---EYNILAYP 129 (408)
Q Consensus 71 ~~~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~~~~~---------------~~~~---~~~i~~~P 129 (408)
+++|+++|+++++||..|..+.... +.+.+.++.++.+...|++... .++. .+++.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 4678999999999999999987544 4556666668999999988654 3443 48999999
Q ss_pred EEEEEe-C---CeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 130 TLYLFV-A---GVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 130 t~~~~~-~---g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++.++. . ++++.+..|..+++++.+.+.+.+
T Consensus 133 ~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 133 LFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp EEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred eEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999996 3 356788999999999988886654
No 298
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.28 E-value=3.4e-06 Score=62.59 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=50.4
Q ss_pred CcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc-----HhHH----HHcCCCcCcEEEEEeCCeEeEEee
Q 015368 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE-----KDLA----KEYNILAYPTLYLFVAGVRQFQFF 144 (408)
Q Consensus 74 ~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~-----~~~~----~~~~i~~~Pt~~~~~~g~~~~~~~ 144 (408)
+..++.|+++||++|++..+.+++.. +.+-.+|++.. .++. +..++.++|++++ ++| ++.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~~~----~~i 89 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-NDE----KAI 89 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-TTT----EEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-CCC----EEE
Confidence 44577799999999999999988753 44555666531 2232 3468999999865 333 356
Q ss_pred CCCCHHHHHHHH
Q 015368 145 GERTRDVISAWV 156 (408)
Q Consensus 145 g~~~~~~l~~~i 156 (408)
|..+.+.|.++|
T Consensus 90 gg~~~~~l~~~L 101 (103)
T 3nzn_A 90 VGFKEKEIRESL 101 (103)
T ss_dssp ESCCHHHHHHHT
T ss_pred EcCCHHHHHHHh
Confidence 778888888765
No 299
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.28 E-value=9.5e-06 Score=63.13 Aligned_cols=108 Identities=16% Similarity=0.243 Sum_probs=82.4
Q ss_pred CCceEeeccccccccccC-CccEEEE-EeeCCC-chHHHHHHHHHHHHhc--CCcceEEEEEEEcCCcccccchhhhccC
Q 015368 265 HPLVVTLTIHNAQFVFQD-PRKQLWL-FAPAYG-SDKVILTFEEVAKALK--GKVNMLLHVYVEMNSEGVGRRVSQEFGV 339 (408)
Q Consensus 265 ~p~v~~lt~~~~~~~~~~-~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~--~~~~~i~f~~vd~~~~~~~~~l~~~~~i 339 (408)
.+.+..++.+++...... +.++++. +.+||. |....+.|.+++.++. ++ +.|+.+|++.. ..+++.|++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~---~~~~~vd~~~~---~~~~~~~~v 79 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKD---LVIAKMDATAN---DITNDQYKV 79 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSS---EEEEEECTTTS---CCCCSSCCC
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCC---EEEEEecCCcC---HHHHhhcCC
Confidence 356788999999887754 5565554 456676 9999999999999998 45 99999998764 466778898
Q ss_pred CCCCCcEEEEEccCCc--cccCC-CCCChHHHHHHHHHHhcCcc
Q 015368 340 SGNAPRVIAYSARDAK--KYVLN-GELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 340 ~~~~~p~i~i~~~~~~--~y~~~-~~~~~~~i~~Fi~~~~~gk~ 380 (408)
.. .|.+++++.++. ...+. |..+.++|.+||+..+....
T Consensus 80 ~~--~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 80 EG--FPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp SS--SSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred Cc--CCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 54 688888876332 23456 56899999999999987654
No 300
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.27 E-value=2.4e-06 Score=65.10 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=81.7
Q ss_pred ceEeeccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 267 LVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 267 ~v~~lt~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
.+..++.+++......+.+.++ ++.+++. |......+.++++++++...++.|+.+|++.. ..+++.+++.. .
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~~--~ 82 (120)
T 1mek_A 8 HVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE---SDLAQQYGVRG--Y 82 (120)
T ss_dssp TEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC---CSSHHHHTCCS--S
T ss_pred CcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC---HHHHHHCCCCc--c
Confidence 3678889998888777766555 4556676 89999999999999874222399999998764 47889999954 6
Q ss_pred cEEEEEccCCcc--ccCCCCCChHHHHHHHHHHhcC
Q 015368 345 RVIAYSARDAKK--YVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 345 p~i~i~~~~~~~--y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
|.++++..+... ..+.|..+.+.+.+|+++.++.
T Consensus 83 Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 83 PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp SEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred cEEEEEeCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 888887543322 5678889999999999988765
No 301
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.27 E-value=2.5e-06 Score=63.37 Aligned_cols=101 Identities=20% Similarity=0.160 Sum_probs=78.3
Q ss_pred eEeeccccccccccCCccEEEEE-eeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCc
Q 015368 268 VVTLTIHNAQFVFQDPRKQLWLF-APAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 345 (408)
Q Consensus 268 v~~lt~~~~~~~~~~~~~~~i~f-~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p 345 (408)
+.+++.+++......+.+.++.| .+++. |....+.+.++++++.++ +.|+.+|++.. ..+++.+|+.. .|
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~~---~~~~~~~~v~~--~P 73 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK---VTVAKLNVDEN---PETTSQFGIMS--IP 73 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT---CEEEEEETTTC---HHHHHHTTCCS--SS
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---cEEEEEECcCC---HHHHHHcCCcc--cc
Confidence 46788888887777666665554 45665 899999999999999988 99999998764 47889999954 68
Q ss_pred EEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 346 VIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 346 ~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
.++++..+.....+.|..+.+.+.+|+++++
T Consensus 74 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 74 TLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEEEEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 8887743333445778888999999998765
No 302
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.27 E-value=3.1e-06 Score=59.80 Aligned_cols=68 Identities=9% Similarity=0.146 Sum_probs=48.9
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccH----hHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHH
Q 015368 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK----DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVI 152 (408)
Q Consensus 77 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~----~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l 152 (408)
++.|+++||++|+...+.+++. ++.+..+|++.++ ++.+.+++.++|+++ .+|+.+ .| .+.|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i---~g---~~~i 68 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI---GG---YDDL 68 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE---ES---HHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE---eC---HHHH
Confidence 5679999999999999888764 3666777777643 356788999999984 478543 22 3566
Q ss_pred HHHHHh
Q 015368 153 SAWVRE 158 (408)
Q Consensus 153 ~~~i~~ 158 (408)
.++++.
T Consensus 69 ~~~~~~ 74 (82)
T 1fov_A 69 YALDAR 74 (82)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 666543
No 303
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.26 E-value=2.5e-06 Score=68.56 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=80.0
Q ss_pred eEeeccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCc
Q 015368 268 VVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 345 (408)
Q Consensus 268 v~~lt~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p 345 (408)
+.+++..++......+.++++ ++.+|+. |......|.++++++.++ +.|+.+|++.. +.+.+.||+.. .|
T Consensus 49 ~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~~~~---~~l~~~~~i~~--~P 120 (155)
T 2ppt_A 49 VAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ---VRLAKIDTQAH---PAVAGRHRIQG--IP 120 (155)
T ss_dssp EEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTS---THHHHHTTCCS--SS
T ss_pred CccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC---EEEEEEeCCcc---HHHHHHcCCCc--CC
Confidence 567787888777655556555 4555665 899999999999999988 99999999864 47889999954 68
Q ss_pred EEEEEccCCccccCCCCCChHHHHHHHHHHhcCc
Q 015368 346 VIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 346 ~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
.++++..+.....+.|..+.++|.+|+++.+...
T Consensus 121 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 121 AFILFHKGRELARAAGARPASELVGFVRGKLGAR 154 (155)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred EEEEEeCCeEEEEecCCCCHHHHHHHHHHHhccC
Confidence 8888754333445788889999999999988653
No 304
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.25 E-value=2.8e-06 Score=63.37 Aligned_cols=102 Identities=21% Similarity=0.227 Sum_probs=77.7
Q ss_pred eEeeccccccccc-cCCccEEEEE-eeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 268 VVTLTIHNAQFVF-QDPRKQLWLF-APAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 268 v~~lt~~~~~~~~-~~~~~~~i~f-~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
+..++.+++.... ..+.+.++.| .+++. |....+.+.+++.++.++ +.|+.+|++.. +.+++.||+.. .
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~--~ 74 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK---LKCVKLNTDES---PNVASEYGIRS--I 74 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHHHHHHTCCS--S
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc---eEEEEEECCCC---HHHHHHCCCCc--C
Confidence 4567778877644 4455665554 45665 899999999999999988 99999998764 47889999953 6
Q ss_pred cEEEEEccCCccccCCCCCChHHHHHHHHHHhc
Q 015368 345 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
|.++++..+...+.+.|..+.+++.++++++++
T Consensus 75 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 75 PTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp CEEEEESSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred CEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 888887544444557888899999999998763
No 305
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.25 E-value=7.7e-06 Score=60.84 Aligned_cols=101 Identities=14% Similarity=0.107 Sum_probs=76.9
Q ss_pred ceEeeccccccccc-cCCccEEEEEe-eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 267 LVVTLTIHNAQFVF-QDPRKQLWLFA-PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 267 ~v~~lt~~~~~~~~-~~~~~~~i~f~-~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
.+..++.+++.... ..+.+.++.|. +++. |......+.++++++.++ +.|+.+|++.. +.+++.||+..
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~-- 74 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGK---VTVAKVNIDDN---PETPNAYQVRS-- 74 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTS---EEEEEEETTTC---CHHHHHTTCCS--
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCc---EEEEEEECCCC---HHHHHhcCCCc--
Confidence 36778888887544 45556655544 5565 899999999999999988 99999998764 47889999954
Q ss_pred CcEEEEEccCCccccCCCCCChHHHHHHHHHH
Q 015368 344 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEF 375 (408)
Q Consensus 344 ~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~ 375 (408)
.|.++++..+.....+.|..+.+.+.+|++++
T Consensus 75 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 75 IPTLMLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred cCEEEEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 68888874333344577888999999999875
No 306
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=3.7e-06 Score=65.49 Aligned_cols=105 Identities=18% Similarity=0.218 Sum_probs=82.2
Q ss_pred ceEeeccccccccc-cCCccEEE-EEeeCCC-chHHHHHHHHHHHHhc----CCcceEEEEEEEcCCcccccchhhhccC
Q 015368 267 LVVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALK----GKVNMLLHVYVEMNSEGVGRRVSQEFGV 339 (408)
Q Consensus 267 ~v~~lt~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~----~~~~~i~f~~vd~~~~~~~~~l~~~~~i 339 (408)
.+..++.+++.... ..+.++++ ++.+||. |......+.++++++. ++ +.|+.+|++.. ..+++.|++
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~---~~l~~~~~v 81 (133)
T 1x5d_A 8 DVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGK---VKLAAVDATVN---QVLASRYGI 81 (133)
T ss_dssp SCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTS---EEEEEEETTTC---CHHHHHHTC
T ss_pred cCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCc---EEEEEEECCCC---HHHHHhCCC
Confidence 46788888888754 44555555 4556666 8999999999999998 77 99999999864 578899999
Q ss_pred CCCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCc
Q 015368 340 SGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 340 ~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
. ..|.+++++.+.....+.|..+.+++.+|+++.+...
T Consensus 82 ~--~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 82 R--GFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp C--SSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred C--eeCeEEEEeCCCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 5 3688888876444556788899999999999988653
No 307
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=98.24 E-value=2.9e-06 Score=76.78 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=72.5
Q ss_pred cEEcChhhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc---------------------
Q 015368 58 VVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--------------------- 115 (408)
Q Consensus 58 ~~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~--------------------- 115 (408)
+.+.+++++...--.||+++++|| +.||+.|..+++.|.+ ....++.++.|++|.
T Consensus 9 l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~---~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~ 85 (322)
T 4eo3_A 9 LLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR---ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDP 85 (322)
T ss_dssp EEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH---SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECT
T ss_pred EECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH---HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcC
Confidence 344444444433346899999999 5799999999888854 222378888888753
Q ss_pred cHhHHHHcCCC----cCcEEEEEe-CCeEeEEeeCC---CCHHHHHHHHHhHh
Q 015368 116 EKDLAKEYNIL----AYPTLYLFV-AGVRQFQFFGE---RTRDVISAWVREKM 160 (408)
Q Consensus 116 ~~~~~~~~~i~----~~Pt~~~~~-~g~~~~~~~g~---~~~~~l~~~i~~~~ 160 (408)
+.++++.||+. .+|++++++ +|++...+.+. ...+++.+++++..
T Consensus 86 ~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 86 EGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp TCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred chHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 35678899984 478999998 99887777654 45788888888765
No 308
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.24 E-value=7.2e-06 Score=62.26 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=73.2
Q ss_pred CCcccccChhHHHHHhc--cCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCe
Q 015368 162 LGTYSITTTDEAERILT--VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~--~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~ 233 (408)
+......+.+++++.+. .++.++|.|+.+||.++.. .+..+++...++.|+.+ .+.+++++|++. ++|+
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~---~~Pt 87 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVK---SMPT 87 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCC---SSSE
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCc---cccE
Confidence 34456668899999997 7888999999999998544 45566644444777765 567899999999 5999
Q ss_pred EEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 234 LIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 234 l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
+++++.+ .....+.|. +.+.|.+||++
T Consensus 88 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~ 114 (116)
T 3qfa_C 88 FQFFKKG-QKVGEFSGA-NKEKLEATINE 114 (116)
T ss_dssp EEEESSS-SEEEEEESC-CHHHHHHHHHH
T ss_pred EEEEeCC-eEEEEEcCC-CHHHHHHHHHH
Confidence 9999644 345567888 89999999975
No 309
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.24 E-value=3.3e-06 Score=62.62 Aligned_cols=101 Identities=15% Similarity=0.228 Sum_probs=76.5
Q ss_pred eEeeccccccccc-cCCccEEEEE-eeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 268 VVTLTIHNAQFVF-QDPRKQLWLF-APAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 268 v~~lt~~~~~~~~-~~~~~~~i~f-~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
+..++.+++.... ..+.+.++.| .+++. |....+.+.+++++++++ +.|+.+|++.. +.+++.+++.. .
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~--~ 73 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK---IAVYKLNTDEA---PGIATQYNIRS--I 73 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHHHHHTTCCS--S
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc---eEEEEEcCcch---HHHHHhCCCCc--c
Confidence 4567888888744 3445665554 45565 899999999999999988 99999998764 47889999954 6
Q ss_pred cEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 345 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
|.++++..+.....+.|..+.+.+.+|+++++
T Consensus 74 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 74 PTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp SEEEEEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred cEEEEEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 88887754333445678889999999998764
No 310
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.23 E-value=3.6e-06 Score=61.87 Aligned_cols=59 Identities=5% Similarity=0.076 Sum_probs=45.1
Q ss_pred CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHH----c-CCCcCcEEEEEeCCeE
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKE----Y-NILAYPTLYLFVAGVR 139 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~----~-~i~~~Pt~~~~~~g~~ 139 (408)
.+.-++.|+++||++|++..+.+++. ++.+..+|++.+++..+. . +..++|++ |.+|+.
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ 77 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQH 77 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEE
Confidence 34567779999999999999988865 466778888887665443 3 89999987 457853
No 311
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.22 E-value=3.5e-06 Score=65.25 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=81.5
Q ss_pred EeeccccccccccCCc-cEEEEEee-CC--C-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 269 VTLTIHNAQFVFQDPR-KQLWLFAP-AY--G-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 269 ~~lt~~~~~~~~~~~~-~~~i~f~~-~~--~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
..+|.++|.....+.. |+++.|.. ++ . |+....++.++|.+|.++ +.|+.+|.+. ++.+...||+..
T Consensus 18 ~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~---v~~~KVdvDe---~~~la~~ygV~s-- 89 (137)
T 2qsi_A 18 TLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR---LVAAEVAAEA---ERGLMARFGVAV-- 89 (137)
T ss_dssp EEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT---EEEEEECGGG---HHHHHHHHTCCS--
T ss_pred cccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC---cEEEEEECCC---CHHHHHHcCCcc--
Confidence 3778888887665555 77776665 77 4 889999999999999999 9999999876 568999999954
Q ss_pred CcEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 344 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 344 ~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
.|.++++..+...-.+.|..+.+++.++|+.++
T Consensus 90 iPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 90 CPSLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp SSEEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 789998876444555788888999999999887
No 312
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.22 E-value=4e-06 Score=67.25 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=77.8
Q ss_pred CCCcccccChhHHHHHhcc--CCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCC
Q 015368 161 TLGTYSITTTDEAERILTV--ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (408)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~~--~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p 232 (408)
...+..+.+.++++..+.. ++.++|.|+.+||.++.. .+..+++..+++.|+.+ .+.+++++|++. ++|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~---~~P 87 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEIS---SVP 87 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCC---SSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCC---CCC
Confidence 3567788888999999987 788999999999998544 45555544467888776 467799999998 599
Q ss_pred eEEEeecCCCcccccCCcCCHHHHHHHHhcCCCC-------ceEeecccccccc
Q 015368 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHP-------LVVTLTIHNAQFV 279 (408)
Q Consensus 233 ~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p-------~v~~lt~~~~~~~ 279 (408)
++++|+. +.....+.| .+.++|.+||....-. .+..++..++..+
T Consensus 88 t~~~~~~-G~~~~~~~G-~~~~~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~ 139 (153)
T 2wz9_A 88 TFLFFKN-SQKIDRLDG-AHAPELTKKVQRHASSGSFLPSAKVKVDTDPNSSSV 139 (153)
T ss_dssp EEEEEET-TEEEEEEES-SCHHHHHHHHHHHSCTTSSCSCCCCCCC--------
T ss_pred EEEEEEC-CEEEEEEeC-CCHHHHHHHHHHHhccccCCCccccccCCCCChhhH
Confidence 9999993 334445667 4778899999864322 3445555554443
No 313
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.22 E-value=6.3e-06 Score=64.06 Aligned_cols=103 Identities=10% Similarity=0.045 Sum_probs=77.3
Q ss_pred HhHhCCCcccccChhHHHHHhccCCeEEEEEecCC--CCc---CHHHHHHHh-ccCCc-eeEEEe---cCHhHHhhcCCC
Q 015368 157 REKMTLGTYSITTTDEAERILTVESKLVLGFLHDL--EGM---ESEELAAAS-KLHSD-VNFYQT---TSADVAEFFHIH 226 (408)
Q Consensus 157 ~~~~~~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~--~~~---~~~~~~~~a-~~~~~-~~f~~~---~~~~l~~~~~i~ 226 (408)
++........+ +.++++..+.+..+++|.|+.+| |++ ..+.+.+++ ++.++ +.|+.+ .+++++.+|+|.
T Consensus 12 ~rl~~~g~~~~-t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~ 90 (140)
T 2qgv_A 12 QRMLARGWTPV-SESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAF 90 (140)
T ss_dssp HHHHHTTCEEC-CHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCC
T ss_pred HHHHhcCCccC-CHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCc
Confidence 33333355566 56888888877777888888888 555 566677777 67778 999987 567899999999
Q ss_pred CCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCC
Q 015368 227 PKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (408)
Q Consensus 227 ~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (408)
+.|++++|+++. ......|-.+.+.+.+||+...
T Consensus 91 ---sIPTlilFk~G~-~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 91 ---RFPATLVFTGGN-YRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp ---SSSEEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred ---cCCEEEEEECCE-EEEEEecCCCHHHHHHHHHHHh
Confidence 599999999764 4456678888889999997543
No 314
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.22 E-value=3e-06 Score=64.73 Aligned_cols=103 Identities=12% Similarity=0.091 Sum_probs=78.7
Q ss_pred CceEeeccccccccc-cCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCC
Q 015368 266 PLVVTLTIHNAQFVF-QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGN 342 (408)
Q Consensus 266 p~v~~lt~~~~~~~~-~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 342 (408)
+.+..++.+++.... ..+.+.++ ++.+++. |......+.++++++.++ +.|+.+|++.. ..+++.|++..
T Consensus 13 ~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~---v~~~~vd~d~~---~~l~~~~~v~~- 85 (119)
T 1w4v_A 13 TTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK---VVMAKVDIDDH---TDLAIEYEVSA- 85 (119)
T ss_dssp SEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---SEEEEEETTTT---HHHHHHTTCCS-
T ss_pred eEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCCCC---HHHHHHcCCCc-
Confidence 457778888887643 44555555 4555666 899999999999999888 99999998864 47889999954
Q ss_pred CCcEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 343 APRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 343 ~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
.|.++++..+.....+.|..+.+.+.+|+++++
T Consensus 86 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 86 -VPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp -SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred -ccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 688888743333445778889999999999876
No 315
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.22 E-value=2e-06 Score=65.92 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=79.3
Q ss_pred eEeecccccc-ccccCCccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 268 VVTLTIHNAQ-FVFQDPRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 268 v~~lt~~~~~-~~~~~~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
+..++.+++. .+...+.+.++. +.+|+. |......+.++++++.++ +.|+.+|++.. +.+++.|++.. .
T Consensus 5 v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~---~~~~~~~~v~~--~ 76 (122)
T 3aps_A 5 SIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK---VRAGKVDCQAY---PQTCQKAGIKA--Y 76 (122)
T ss_dssp SEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTC---HHHHHHTTCCS--S
T ss_pred hhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEeCcCC---HHHHHHcCCCc--c
Confidence 5678888884 455555565554 556666 899999999999999988 99999999864 47889999954 6
Q ss_pred cEEEEEccCCccccCCCC----CChHHHHHHHHHHhcC
Q 015368 345 RVIAYSARDAKKYVLNGE----LTLSSIKSFGEEFLED 378 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~----~~~~~i~~Fi~~~~~g 378 (408)
|.+++++.++....+.|. .+.+.|.+|++..++.
T Consensus 77 Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 77 PSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp SEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred ceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 888888764544445553 7899999999998864
No 316
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.21 E-value=4.8e-06 Score=62.67 Aligned_cols=103 Identities=15% Similarity=0.181 Sum_probs=78.8
Q ss_pred ceEeeccccccc-cccCCccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 267 LVVTLTIHNAQF-VFQDPRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 267 ~v~~lt~~~~~~-~~~~~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
.+..++.+++.. +...+.+.++. +.+++. |....+.+.+++.++.++ +.|+.+|++.. ..+++.||+..
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~-- 77 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK---IEIVKLNIDEN---PGTAAKYGVMS-- 77 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHHHHHTTCCS--
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC---eEEEEEEcCCC---HHHHHhCCCCc--
Confidence 357788888765 34455565554 455666 899999999999999888 99999998864 47889999954
Q ss_pred CcEEEEEccCCccccCCCCCChHHHHHHHHHHhc
Q 015368 344 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 344 ~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
.|.++++..+...+.+.|..+.+.+.+|++++++
T Consensus 78 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 78 IPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred ccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 6788877543344557888889999999998875
No 317
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.21 E-value=3.1e-06 Score=64.04 Aligned_cols=67 Identities=16% Similarity=0.362 Sum_probs=46.2
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc----Hh----HHHHcCCCcCcEEEEEe
Q 015368 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE----KD----LAKEYNILAYPTLYLFV 135 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~----~~----~~~~~~i~~~Pt~~~~~ 135 (408)
+.++..+..++ ++.|+++||++|++..+.+++. ++.+..+|++.. ++ +.+..|..++|++ |.
T Consensus 10 ~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi 79 (113)
T 3rhb_A 10 ESIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FV 79 (113)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EE
Confidence 34455555555 6669999999999999888764 344556666542 22 5556799999998 45
Q ss_pred CCeEe
Q 015368 136 AGVRQ 140 (408)
Q Consensus 136 ~g~~~ 140 (408)
+|+.+
T Consensus 80 ~g~~i 84 (113)
T 3rhb_A 80 CGKHI 84 (113)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88543
No 318
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.21 E-value=3.9e-06 Score=66.03 Aligned_cols=108 Identities=19% Similarity=0.166 Sum_probs=84.2
Q ss_pred ceEeeccccccccccCCccEEEEEe-eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 267 LVVTLTIHNAQFVFQDPRKQLWLFA-PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 267 ~v~~lt~~~~~~~~~~~~~~~i~f~-~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
.+..++.+++......+.++++.|. +||. |+.....+.++++++.++..++.|+.+|++.. ..+++.|++. ..
T Consensus 18 ~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~v~--~~ 92 (140)
T 2dj1_A 18 GVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA---SMLASKFDVS--GY 92 (140)
T ss_dssp TEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC---HHHHHHTTCC--SS
T ss_pred CCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc---HHHHHHCCCC--cc
Confidence 4678888898887777666655554 5665 88999999999999976322389999998764 4788999995 36
Q ss_pred cEEEEEccCCccccCCCCCChHHHHHHHHHHhcCcc
Q 015368 345 RVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
|.++++. +|+...+.|..+.+.|.+|+++.+....
T Consensus 93 Pt~~~~~-~G~~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 93 PTIKILK-KGQAVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp SEEEEEE-TTEEEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred CeEEEEE-CCcEEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 8888875 4556668899999999999999987654
No 319
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.20 E-value=5.4e-06 Score=61.51 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=72.3
Q ss_pred cccccChhHHHHHhc--cCCeEEEEEecCCCCcCH---HHHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeEE
Q 015368 164 TYSITTTDEAERILT--VESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (408)
Q Consensus 164 ~~~i~~~~~~~~~~~--~~~~~vi~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~ 235 (408)
+..+.+.++++..+. .++.+++.|+++||.++. +.+..+++...++.|+.+ .+.++++++++. +.|+++
T Consensus 2 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~---~~Pt~~ 78 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVK---SMPTFQ 78 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCC---BSSEEE
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCC---cCcEEE
Confidence 356788999999997 678899999999998754 345555544445777765 567899999998 599999
Q ss_pred EeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 236 FLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
+++.+ .....+.|. +.+++.+|+++
T Consensus 79 ~~~~g-~~~~~~~g~-~~~~l~~~l~~ 103 (105)
T 3m9j_A 79 FFKKG-QKVGEFSGA-NKEKLEATINE 103 (105)
T ss_dssp EEETT-EEEEEEESS-CHHHHHHHHHH
T ss_pred EEECC-eEEEEEeCC-CHHHHHHHHHH
Confidence 99654 345567888 88999999875
No 320
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.18 E-value=8.1e-06 Score=62.93 Aligned_cols=94 Identities=9% Similarity=0.063 Sum_probs=72.9
Q ss_pred cccccChhHHHHHhccCCeEEEEEecCCCCc---CHHHHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeEEEe
Q 015368 164 TYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFL 237 (408)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~ 237 (408)
+..+++.++++..+..++.++|.|+++||.+ ..+.+..+++..+++.|+.+ .+.+++++|++. +.|+++++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~---~~Pt~~i~ 97 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVL---QLPTFIIA 97 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC---SSSEEEEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCC---cccEEEEE
Confidence 5678887999999988889999999999987 45556666643356888765 467799999998 59999999
Q ss_pred ecCCCcccccCCcCCHHHHHHHHhc
Q 015368 238 HLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
+.+ .....+.| .+.++|.+||..
T Consensus 98 ~~G-~~~~~~~G-~~~~~l~~~l~~ 120 (125)
T 1r26_A 98 RSG-KMLGHVIG-ANPGMLRQKLRD 120 (125)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHH
T ss_pred eCC-eEEEEEeC-CCHHHHHHHHHH
Confidence 644 24456778 688899999875
No 321
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.18 E-value=4.7e-06 Score=62.51 Aligned_cols=104 Identities=20% Similarity=0.203 Sum_probs=78.2
Q ss_pred ceEeeccccccccccCCccEEEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCc
Q 015368 267 LVVTLTIHNAQFVFQDPRKQLWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 345 (408)
Q Consensus 267 ~v~~lt~~~~~~~~~~~~~~~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p 345 (408)
.+..+|.+++......+..++.++.+++. |......+.++++++....+++.|+.+|++.. ..+++.|++.. .|
T Consensus 6 ~v~~l~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~~v~~--~P 80 (111)
T 3uvt_A 6 TVLALTENNFDDTIAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE---RNICSKYSVRG--YP 80 (111)
T ss_dssp CSEECCTTTHHHHHHSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC---HHHHHHTTCCS--SS
T ss_pred cceEcChhhHHHHhcCCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc---HhHHHhcCCCc--cc
Confidence 46788999988887743234445566776 89999999999998863212399999998864 47889999954 67
Q ss_pred EEEEEccCCccccCCCCCChHHHHHHHHHH
Q 015368 346 VIAYSARDAKKYVLNGELTLSSIKSFGEEF 375 (408)
Q Consensus 346 ~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~ 375 (408)
.++++..+.....+.|..+.+.|.+|+++.
T Consensus 81 t~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 81 TLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 888886544445678889999999999863
No 322
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.18 E-value=9.9e-06 Score=58.11 Aligned_cols=74 Identities=14% Similarity=0.165 Sum_probs=52.5
Q ss_pred cEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc----HhHHHHcCC-----CcCcEEEEEeCCeEeEEeeC
Q 015368 75 NVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE----KDLAKEYNI-----LAYPTLYLFVAGVRQFQFFG 145 (408)
Q Consensus 75 ~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~----~~~~~~~~i-----~~~Pt~~~~~~g~~~~~~~g 145 (408)
..++.|+++||++|++..+.+++.. -.+.+..||.+++ .++.+.+|. .++|++++ +|+.+ |
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i----~ 73 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI----G 73 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE----E
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE----e
Confidence 3477899999999999988776532 2456666666554 457777888 99999854 78533 3
Q ss_pred CCCHHHHHHHHHhHh
Q 015368 146 ERTRDVISAWVREKM 160 (408)
Q Consensus 146 ~~~~~~l~~~i~~~~ 160 (408)
..+++.+++++.+
T Consensus 74 --g~~~i~~~~~~~~ 86 (89)
T 3msz_A 74 --GFTELKANADKIL 86 (89)
T ss_dssp --SHHHHHHTHHHHT
T ss_pred --ChHHHHHHHHHHh
Confidence 4567777776654
No 323
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.17 E-value=8.7e-06 Score=61.59 Aligned_cols=96 Identities=17% Similarity=0.174 Sum_probs=73.5
Q ss_pred CCcccccChhHHHHHhccCCeEEEEEecCCCCc---CHHHHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeEE
Q 015368 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~ 235 (408)
+.+..+++.++++..++.++.+++.|+++||.+ ..+.+..+++...++.|..+ .+.++++++++. +.|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~---~~Pt~~ 88 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVT---AMPTFV 88 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC---SBSEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCC---cccEEE
Confidence 346678899999999999999999999999987 44556666633334777765 456799999998 599999
Q ss_pred EeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 236 FLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
+++.+ .....+.|.. .+.|.+||++
T Consensus 89 ~~~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred EEeCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 88644 2345677877 8999999874
No 324
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.17 E-value=6.6e-06 Score=61.85 Aligned_cols=96 Identities=18% Similarity=0.132 Sum_probs=73.3
Q ss_pred CCcccccChhHHHHHhcc----CCeEEEEEecCCCCcCH---HHHHHHh-ccCCceeEEEe---cCHhHHhhcCCCCCCC
Q 015368 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMES---EELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSK 230 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~vi~f~~~~~~~~~---~~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~ 230 (408)
..+..+.+.++++..+.. ++.+++.|+.+||.++. +.+..++ .+.+++.|..+ .+.+++++|++. +
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~---~ 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGIT---A 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCC---B
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCC---c
Confidence 456778888999988875 78899999999998754 3455555 45547888765 456799999998 5
Q ss_pred CCeEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 231 ~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
.|++++++.+ .....+.|. +.+++.+|++.
T Consensus 79 ~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~ 108 (112)
T 1ep7_A 79 MPTFHVYKDG-VKADDLVGA-SQDKLKALVAK 108 (112)
T ss_dssp SSEEEEEETT-EEEEEEESC-CHHHHHHHHHH
T ss_pred ccEEEEEECC-eEEEEEcCC-CHHHHHHHHHH
Confidence 9999988644 234567787 88999999875
No 325
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.16 E-value=6e-06 Score=61.39 Aligned_cols=96 Identities=9% Similarity=0.098 Sum_probs=64.4
Q ss_pred ccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEE
Q 015368 272 TIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAY 349 (408)
Q Consensus 272 t~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i 349 (408)
|.+++......+.++++ ++.+|+. |+...+.+.++++++. + +.|+.+|++.. +.+++.|++.. .|.+++
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~---~~~~~vd~~~~---~~l~~~~~v~~--~Pt~~~ 77 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-Y---VEKIEILLQDM---QEIAGRYAVFT--GPTVLL 77 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-T---EEEEEEEECCC------------CC--CCEEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-C---ceEEEEECCCC---HHHHHhcCCCC--CCEEEE
Confidence 45667776666666555 4556776 9999999999999994 6 99999998864 47889999953 688888
Q ss_pred EccCCccccCCCCCChHHHHHHHHHHh
Q 015368 350 SARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 350 ~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
+..+.....+.|..+.+++.+|+++++
T Consensus 78 ~~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 78 FYNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred EeCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 864333455678889999999998765
No 326
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.16 E-value=4.8e-05 Score=60.25 Aligned_cols=110 Identities=12% Similarity=0.177 Sum_probs=84.9
Q ss_pred CCcEEcChhhHHHHHcCCCcEEEEEecC-CChhHHhhhHHHHHHHHHhcCCcEEEEEeC--cccHhHHHHcCCCc--CcE
Q 015368 56 KDVVSLNGKNFSEFMGKNRNVMVMFYAN-WCYWSKKLAPEFAAAAKMLKGEADLVMVDA--YLEKDLAKEYNILA--YPT 130 (408)
Q Consensus 56 ~~~~~l~~~~~~~~~~~~~~~~v~f~a~-wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~--~~~~~~~~~~~i~~--~Pt 130 (408)
+-+.++|.++...+..++-++.++++.. .-..-....+.+.++|+.+++++.|+.||. ++...+.+.||+.. .|+
T Consensus 14 PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~ 93 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPA 93 (147)
T ss_dssp -CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSE
T ss_pred CeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCE
Confidence 3678899999988887776666554443 333456678999999999999999999999 66667889999996 899
Q ss_pred EEEEeC-C-eEeEEee-CCCCHHHHHHHHHhHhCCCcc
Q 015368 131 LYLFVA-G-VRQFQFF-GERTRDVISAWVREKMTLGTY 165 (408)
Q Consensus 131 ~~~~~~-g-~~~~~~~-g~~~~~~l~~~i~~~~~~~~~ 165 (408)
+.+++. + .....+. +..+.+.|.+|++..+...+.
T Consensus 94 v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~ 131 (147)
T 3bj5_A 94 VRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 131 (147)
T ss_dssp EEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSC
T ss_pred EEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcc
Confidence 999974 3 1223333 789999999999999876653
No 327
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.15 E-value=8.1e-06 Score=69.87 Aligned_cols=107 Identities=17% Similarity=0.248 Sum_probs=86.1
Q ss_pred CceEeeccccccc-cccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCC
Q 015368 266 PLVVTLTIHNAQF-VFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGN 342 (408)
Q Consensus 266 p~v~~lt~~~~~~-~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 342 (408)
+.+..+|.+++.. +..++.++++ ++.+||. |+...+.+.++++++.++ +.|+.+|++.. +.+++.|++..
T Consensus 12 ~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~---~~l~~~~~v~~- 84 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQN---PGTAPKYGIRG- 84 (222)
T ss_dssp CCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---TTTGGGGTCCS-
T ss_pred CCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---cEEEEEECCCC---HHHHHHcCCCc-
Confidence 4578899999987 4555665555 5667776 999999999999999998 99999999864 47889999953
Q ss_pred CCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCcc
Q 015368 343 APRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 343 ~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
.|.+++++.+.....+.|..+.+.+.+|+++.+++..
T Consensus 85 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 85 -IPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp -BSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred -CCEEEEEECCeEEEEeccccChHHHHHHHHhhccccc
Confidence 6888888643344457888999999999999998876
No 328
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.15 E-value=1.7e-05 Score=59.56 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=70.6
Q ss_pred ccccChhHHHHHhccCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeEEEee
Q 015368 165 YSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFLH 238 (408)
Q Consensus 165 ~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~~ 238 (408)
..+.+.+++ ..+..++.+++.|+++||.++.. .+..+++...++.|..+ .+.++++++++. +.|++++|+
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~---~~Pt~~~~~ 80 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFE---RVPTLVFIR 80 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCC---SSCEEEEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCc---ccCEEEEEE
Confidence 344566777 56667788899999999998544 45555544446777764 466899999998 599999995
Q ss_pred cCCCcccccCCcCCHHHHHHHHhcCCCC
Q 015368 239 LEAGKATPFRHQFTRLAIANFVTHTKHP 266 (408)
Q Consensus 239 ~~~~~~~~y~g~~~~~~i~~fi~~~~~p 266 (408)
.+ .....+.|..+.++|.+++....-|
T Consensus 81 ~G-~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 81 DG-KVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SS-SEEEEEESCCCHHHHHHHHHTC---
T ss_pred CC-EEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 43 3556788988999999999876543
No 329
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.15 E-value=5.9e-06 Score=59.82 Aligned_cols=56 Identities=14% Similarity=0.333 Sum_probs=43.1
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHh----HHHHcCCCcCcEEEEEeCCeE
Q 015368 76 VMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLFVAGVR 139 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~i~~~Pt~~~~~~g~~ 139 (408)
.++.|+++||++|++..+.+++. ++.+..+|+++++. +.+.+++.++|++ +.+|+.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 46789999999999998888763 46777888877654 4457899999975 457854
No 330
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.14 E-value=6.2e-06 Score=62.98 Aligned_cols=106 Identities=13% Similarity=0.121 Sum_probs=80.0
Q ss_pred CCceEeeccccccc-cccCCccEEEEE-eeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCC
Q 015368 265 HPLVVTLTIHNAQF-VFQDPRKQLWLF-APAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSG 341 (408)
Q Consensus 265 ~p~v~~lt~~~~~~-~~~~~~~~~i~f-~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~ 341 (408)
...+..++.+++.. +...+.+.++.| .+++. |....+.+.+++.++.++ +.|+.+|++.. ..+++.+++..
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~i~~ 84 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATD---LTVAKLDVDTN---PETARNFQVVS 84 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC---HHHHHHTTCCS
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---eEEEEEECCCC---HHHHHhcCCCc
Confidence 34567888888875 344555665554 45565 899999999999999888 99999998864 47889999954
Q ss_pred CCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcC
Q 015368 342 NAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 342 ~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
.|.++++..+.....+.|..+.+.+.+|++.++.+
T Consensus 85 --~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 85 --IPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp --SSEEEEEETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred --CCEEEEEECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 68888876433345578888999999999887654
No 331
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.13 E-value=1.1e-05 Score=60.38 Aligned_cols=95 Identities=16% Similarity=0.209 Sum_probs=72.3
Q ss_pred cccccChhHHHHHhccCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeEEEe
Q 015368 164 TYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIFL 237 (408)
Q Consensus 164 ~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~~~ 237 (408)
.....+.++++..+..++.+++.|+.+||.++.. .+..+++...++.|..+ .+.++++++++. +.|+++++
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~---~~Pt~~~~ 84 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVS---AMPTLLLF 84 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC---SSSEEEEE
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCC---ccCEEEEE
Confidence 3445688999999999999999999999988544 45555544455777665 567899999999 59999999
Q ss_pred ecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 238 HLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 238 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
+. +.....+.|. +.++|.+||+++
T Consensus 85 ~~-G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 85 KN-GKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp ET-TEEEEEEESS-CHHHHHHHHHHH
T ss_pred EC-CEEEEEEeCC-CHHHHHHHHHhh
Confidence 84 3345567787 679999998753
No 332
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.13 E-value=1.2e-05 Score=59.48 Aligned_cols=93 Identities=15% Similarity=0.287 Sum_probs=70.1
Q ss_pred ccccChhHHHHHhc--cCCeEEEEEecCCCCcCH---HHHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeEEE
Q 015368 165 YSITTTDEAERILT--VESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALIF 236 (408)
Q Consensus 165 ~~i~~~~~~~~~~~--~~~~~vi~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~~ 236 (408)
+.+++.++++..+. .++++++.|+.+||.++. +.+..+++...++.|+.+ .+.++++++++. +.|++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~---~~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVT---AMPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC---SSSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCc---cccEEEE
Confidence 56778889998887 577899999999998744 445555543346777765 456799999998 5999999
Q ss_pred eecCCCcccccCCcCCHHHHHHHHhc
Q 015368 237 LHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 237 ~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
++.+ .....+.| .+.+++.+|+++
T Consensus 79 ~~~g-~~~~~~~G-~~~~~l~~~l~~ 102 (104)
T 2vim_A 79 IKDG-KEVDRFSG-ANETKLRETITR 102 (104)
T ss_dssp EETT-EEEEEEES-SCHHHHHHHHHH
T ss_pred EeCC-cEEEEEeC-CCHHHHHHHHHh
Confidence 9743 34456778 688999999875
No 333
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.13 E-value=9.1e-06 Score=59.95 Aligned_cols=101 Identities=12% Similarity=0.080 Sum_probs=77.5
Q ss_pred eEeeccccccccccCCccEEEEEe-eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCc
Q 015368 268 VVTLTIHNAQFVFQDPRKQLWLFA-PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPR 345 (408)
Q Consensus 268 v~~lt~~~~~~~~~~~~~~~i~f~-~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p 345 (408)
+.+++.+++......+.+.++.|. +++. |......+.++++++.+ +.|+.+|++.. ..+++.+++.. .|
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~---~~~~~~~~v~~--~P 71 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDEN---PDIAARYGVMS--LP 71 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTC---HHHHHHTTCCS--SC
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCC---HHHHHhCCccc--cC
Confidence 356788888887766666665554 5565 88999999999999875 89999998764 47889999954 68
Q ss_pred EEEEEccCCccccCCCCCChHHHHHHHHHHhc
Q 015368 346 VIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 346 ~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
.++++..+.....+.|..+.+++.+|+++++.
T Consensus 72 t~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 72 TVIFFKDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEEEEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEEEEECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 88887433334457788899999999998864
No 334
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.12 E-value=1.3e-05 Score=61.35 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=73.7
Q ss_pred CCcccccChhHHHHHhccCCeEEEEEecCCCCcCHHH---HHHHhc-cCCc-eeEEEe---cCHhHHhhcCCCCCCCCCe
Q 015368 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESEE---LAAASK-LHSD-VNFYQT---TSADVAEFFHIHPKSKRPA 233 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~---~~~~a~-~~~~-~~f~~~---~~~~l~~~~~i~~~~~~p~ 233 (408)
..+..|++.++++..+..++.+++.|+.+||.++... +..+++ +... +.|+.+ .+.++++++++. +.|+
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~---~~Pt 91 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIR---AMPT 91 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCC---SSSE
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCC---cccE
Confidence 4567889999999999888899999999999985443 455553 3322 777665 456899999998 5999
Q ss_pred EEEeecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 234 LIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 234 l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
+++++.+ .....+.|. +.+++.+||+..
T Consensus 92 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 92 FVFFKNG-QKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EEEEETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECC-eEEeeEcCC-CHHHHHHHHHHh
Confidence 9999643 344567787 889999999753
No 335
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.12 E-value=1e-05 Score=60.32 Aligned_cols=95 Identities=12% Similarity=0.147 Sum_probs=70.6
Q ss_pred CcccccChhHHHHHh--ccCCeEEEEEecCCCCcCH---HHHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeE
Q 015368 163 GTYSITTTDEAERIL--TVESKLVLGFLHDLEGMES---EELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~--~~~~~~vi~f~~~~~~~~~---~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l 234 (408)
.+..+.+.++++..+ ..++.+++.|+++||.++. +.+..+++..+++.|+.+ .+.++++++++. +.|++
T Consensus 2 ~v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~---~~Pt~ 78 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNIS---ATPTF 78 (107)
T ss_dssp CEEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCC---SSSEE
T ss_pred ceEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCC---cccEE
Confidence 356778889999988 4678899999999998854 445566643367888765 467899999998 59999
Q ss_pred EEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 235 IFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 235 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
++++.+ .....+.|. +.++|.+|++.
T Consensus 79 ~~~~~G-~~~~~~~G~-~~~~l~~~l~~ 104 (107)
T 1gh2_A 79 QFFRNK-VRIDQYQGA-DAVGLEEKIKQ 104 (107)
T ss_dssp EEEETT-EEEEEEESS-CHHHHHHHHHH
T ss_pred EEEECC-eEEEEEeCC-CHHHHHHHHHH
Confidence 999654 244567784 55669999875
No 336
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=98.12 E-value=1.8e-05 Score=66.67 Aligned_cols=111 Identities=14% Similarity=0.264 Sum_probs=79.5
Q ss_pred cCCCCCCCCcc------CCCcEEcChhhHHHHHcCCCcEEEEEe-cCCChhHHhhhHHHHHHHHHhcC-CcEEEEEeCcc
Q 015368 44 LNNNHTWPLLY------AKDVVSLNGKNFSEFMGKNRNVMVMFY-ANWCYWSKKLAPEFAAAAKMLKG-EADLVMVDAYL 115 (408)
Q Consensus 44 ~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~v~~~~v~~~~ 115 (408)
...|..+|++. +.....++-.+| .+|.+++.|| +.||+.|..++..|.+.+.+++. ++.++.|.+|.
T Consensus 26 ~~vG~~APdF~~~a~l~d~~g~~vsLsd~-----~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds 100 (219)
T 3tue_A 26 AKINSPAPSFEEVALMPNGSFKKISLSSY-----KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDS 100 (219)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGG-----TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSC
T ss_pred cccCCcCCCCcccccccCCCCcEEehHHh-----CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCc
Confidence 45566777764 223333333333 6789999999 89999999999999999999988 89999999864
Q ss_pred ----------------------------cHhHHHHcCCC----c--CcEEEEEe-CCeEeEEee----CCCCHHHHHHHH
Q 015368 116 ----------------------------EKDLAKEYNIL----A--YPTLYLFV-AGVRQFQFF----GERTRDVISAWV 156 (408)
Q Consensus 116 ----------------------------~~~~~~~~~i~----~--~Pt~~~~~-~g~~~~~~~----g~~~~~~l~~~i 156 (408)
+.++++.||+- + +-.+++++ +|++...+. -.++.+++.+.|
T Consensus 101 ~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l 180 (219)
T 3tue_A 101 EYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLL 180 (219)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHH
T ss_pred hhhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHH
Confidence 34578889873 2 34778888 886554332 246788887777
Q ss_pred HhH
Q 015368 157 REK 159 (408)
Q Consensus 157 ~~~ 159 (408)
+..
T Consensus 181 ~aL 183 (219)
T 3tue_A 181 EAF 183 (219)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 337
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.11 E-value=7.7e-06 Score=69.36 Aligned_cols=107 Identities=17% Similarity=0.230 Sum_probs=85.6
Q ss_pred CceEeeccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCC
Q 015368 266 PLVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNA 343 (408)
Q Consensus 266 p~v~~lt~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 343 (408)
+.+..++..++......+.++++ ++.+||. |......+.+++.++.++ +.|+.+|++.. ..+++.+++..
T Consensus 97 ~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~---v~~~~vd~~~~---~~l~~~~~v~~-- 168 (210)
T 3apq_A 97 PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL---LRIGAVNCGDD---RMLCRMKGVNS-- 168 (210)
T ss_dssp TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---BEEEEEETTTC---HHHHHHTTCCS--
T ss_pred CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc---eEEEEEECCcc---HHHHHHcCCCc--
Confidence 45678888888877766666555 5556776 999999999999999988 99999999864 47889999954
Q ss_pred CcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCcc
Q 015368 344 PRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 344 ~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
.|.++++..+.....+.|..+.+.|.+||++.+...+
T Consensus 169 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 169 YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp SSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred CCeEEEEECCCceeEecCCCCHHHHHHHHHHhCcccc
Confidence 6888888444445568899999999999999987755
No 338
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.09 E-value=1.7e-05 Score=59.66 Aligned_cols=97 Identities=13% Similarity=0.167 Sum_probs=72.9
Q ss_pred CCcccccChhHHHHHhccCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeEE
Q 015368 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPALI 235 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l~ 235 (408)
+......+.++++..++.++.+++.|+.+||..+.. .+..+++...++.|+.+ .+.++++++++. +.|+++
T Consensus 8 ~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~---~~Pt~~ 84 (112)
T 1syr_A 8 HMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENIT---SMPTFK 84 (112)
T ss_dssp -CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCC---SSSEEE
T ss_pred eeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCC---cccEEE
Confidence 344455688999999988899999999999988544 44555543346777765 456799999998 599999
Q ss_pred EeecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 236 FLHLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 236 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
+++.+ .....+.|. +.++|.+||+..
T Consensus 85 ~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 85 VYKNG-SSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEETT-EEEEEEESC-CHHHHHHHHHTT
T ss_pred EEECC-cEEEEEeCC-CHHHHHHHHHHh
Confidence 98743 244567888 889999999764
No 339
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.08 E-value=1.3e-05 Score=61.60 Aligned_cols=96 Identities=13% Similarity=0.225 Sum_probs=67.2
Q ss_pred CcccccChhHHH-HHhccCCeEEEEEecCCCC--------------cC---HHHHHHHh-ccCCceeEEEe---cCHhHH
Q 015368 163 GTYSITTTDEAE-RILTVESKLVLGFLHDLEG--------------ME---SEELAAAS-KLHSDVNFYQT---TSADVA 220 (408)
Q Consensus 163 ~~~~i~~~~~~~-~~~~~~~~~vi~f~~~~~~--------------~~---~~~~~~~a-~~~~~~~f~~~---~~~~l~ 220 (408)
.+..++ .++++ .+++.++++++.|+++||. ++ .+.+..++ ++.+++.|+.+ .+.+++
T Consensus 4 ~v~~l~-~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 4 KIIHLT-DDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp SCEECC-STTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred ccEecC-hhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 455664 46665 4556788999999999999 74 44455544 44456777765 456789
Q ss_pred hhcCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 221 EFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 221 ~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
++|++. ++|++++++. +.....+.|..+.+++.+||+..
T Consensus 83 ~~~~v~---~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 83 PKYGIR---GIPTLLLFKN-GEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGTCC---BSSEEEEEES-SSEEEEEESCCCHHHHHHHHTTT
T ss_pred HHcCCC---ccCEEEEEEC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 999998 5999999954 33455788999999999999764
No 340
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.08 E-value=1.1e-05 Score=63.58 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=74.9
Q ss_pred eEeecc-cccccccc--CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCC
Q 015368 268 VVTLTI-HNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGN 342 (408)
Q Consensus 268 v~~lt~-~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 342 (408)
+..++. +++..... ...|+++ |+.+|+. |+...+.|.++|.++.++ +.|+.+|.++ .+.+...|++.
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~---v~f~kVDVDe---~~e~a~~y~V~-- 94 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF---CVIYLVDITE---VPDFNTMYELY-- 94 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTT---CCTTTTTTTCC--
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC---cEEEEEECCC---CHHHHHHcCCC--
Confidence 444553 56654442 3445555 5667887 999999999999999998 9999999987 46899999995
Q ss_pred CCcEEEEEccCCccc----------cCCCCCC-hHHHHHHHHHHhcC
Q 015368 343 APRVIAYSARDAKKY----------VLNGELT-LSSIKSFGEEFLED 378 (408)
Q Consensus 343 ~~p~i~i~~~~~~~y----------~~~~~~~-~~~i~~Fi~~~~~g 378 (408)
..|.++++.. |+.- ++.|..+ .++|.++|+.++.|
T Consensus 95 siPT~~fFk~-G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 95 DPVSVMFFYR-NKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp SSEEEEEEET-TEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEC-CEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHH
Confidence 4788887764 3332 5677665 77888887776654
No 341
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=98.07 E-value=7.5e-06 Score=68.21 Aligned_cols=41 Identities=10% Similarity=0.224 Sum_probs=34.5
Q ss_pred CCcEEEEEecCCChhHHhhhHHH---HHHHHHhcCCcEEEEEeC
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEF---AAAAKMLKGEADLVMVDA 113 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~v~~~~v~~ 113 (408)
+++++|.|+..|||||+++.|.+ .++.+.+.+++.|..+..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~ 64 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHV 64 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEEC
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEec
Confidence 47899999999999999999986 689999977666666553
No 342
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.05 E-value=1.9e-05 Score=58.53 Aligned_cols=100 Identities=10% Similarity=0.145 Sum_probs=73.1
Q ss_pred eEeecc-cccccccc--CCccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCC
Q 015368 268 VVTLTI-HNAQFVFQ--DPRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGN 342 (408)
Q Consensus 268 v~~lt~-~~~~~~~~--~~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 342 (408)
+.+++. +++..... .+.+.++. +.+++. |....+.+++++++++++ +.|+.+|++.. ..+++.+++..
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~- 74 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADN---VVVLKVDVDEC---EDIAMEYNISS- 74 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---EEEEEEETTTC---HHHHHHTTCCS-
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCC---eEEEEEeccch---HHHHHHcCCCc-
Confidence 345565 66666665 45555554 455665 889999999999999877 99999998764 47889999954
Q ss_pred CCcEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 343 APRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 343 ~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
.|.++++..+.....+.| .+.+.+.+|+++++
T Consensus 75 -~Pt~~~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 75 -MPTFVFLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp -SSEEEEEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred -ccEEEEEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 688887754333444667 68899999998753
No 343
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.05 E-value=1.1e-05 Score=62.51 Aligned_cols=102 Identities=9% Similarity=0.053 Sum_probs=74.9
Q ss_pred CCceEeeccccccccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCC
Q 015368 265 HPLVVTLTIHNAQFVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGN 342 (408)
Q Consensus 265 ~p~v~~lt~~~~~~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 342 (408)
.|.+..++...+......+.++++ ++.+||. |+.....+.+++++++++ +.|+.+|++.. ..+++.|++..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---v~~~~vd~d~~---~~l~~~~~v~~- 96 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR---IYLLKVDLDKN---ESLARKFSVKS- 96 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---EEEEEEEGGGC---HHHHHHTTCCS-
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---eEEEEEECCCC---HHHHHHcCCCC-
Confidence 344444455555555555666555 5556776 999999999999999988 99999998864 48889999954
Q ss_pred CCcEEEEEccCCccccCCCCCChHHHHHHHHH
Q 015368 343 APRVIAYSARDAKKYVLNGELTLSSIKSFGEE 374 (408)
Q Consensus 343 ~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~ 374 (408)
.|.++++..+.....+.|..+.++|.+|+++
T Consensus 97 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 97 -LPTIILLKNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp -SSEEEEEETTEEEEEESSCCCHHHHHHHHTT
T ss_pred -cCEEEEEECCEEEEEecCCCCHHHHHHHHHh
Confidence 6888887544444557888999999999875
No 344
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.04 E-value=2.9e-05 Score=58.30 Aligned_cols=94 Identities=17% Similarity=0.251 Sum_probs=67.6
Q ss_pred cccccChhHHHHHhcc---CCeEEEEEecCCCCcCHH---HHHHHhcc--CCceeEEEe---cCHhHHhhcCCCCCCCCC
Q 015368 164 TYSITTTDEAERILTV---ESKLVLGFLHDLEGMESE---ELAAASKL--HSDVNFYQT---TSADVAEFFHIHPKSKRP 232 (408)
Q Consensus 164 ~~~i~~~~~~~~~~~~---~~~~vi~f~~~~~~~~~~---~~~~~a~~--~~~~~f~~~---~~~~l~~~~~i~~~~~~p 232 (408)
+..+++.++++..+.. ++.+++.|+++||.++.. .+..+++. ..++.|..+ .+.++++++++. +.|
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~---~~P 78 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEIS---AVP 78 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCC---SSS
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCC---ccc
Confidence 4567777889988875 778999999999998544 45555533 456777765 467899999998 599
Q ss_pred eEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 233 ~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
++++++.+ .....+.|. ..+++.+|+..
T Consensus 79 t~~~~~~G-~~~~~~~G~-~~~~l~~~l~~ 106 (112)
T 3d6i_A 79 YFIIIHKG-TILKELSGA-DPKEYVSLLED 106 (112)
T ss_dssp EEEEEETT-EEEEEECSC-CHHHHHHHHHH
T ss_pred EEEEEECC-EEEEEecCC-CHHHHHHHHHH
Confidence 99999643 344567776 45669898875
No 345
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.04 E-value=6.8e-06 Score=64.83 Aligned_cols=105 Identities=6% Similarity=0.035 Sum_probs=69.6
Q ss_pred ceEeeccccccccccCCccEEEEEe-eC--CC-chHHHHHHHHHHHHhcCCcceEE--EEEEEcCCcccccchhhhccCC
Q 015368 267 LVVTLTIHNAQFVFQDPRKQLWLFA-PA--YG-SDKVILTFEEVAKALKGKVNMLL--HVYVEMNSEGVGRRVSQEFGVS 340 (408)
Q Consensus 267 ~v~~lt~~~~~~~~~~~~~~~i~f~-~~--~~-~~~~~~~~~~vA~~~~~~~~~i~--f~~vd~~~~~~~~~l~~~~~i~ 340 (408)
-+..++.+++..........+++|. .+ +. |+...+.|.++|+++ ++ +. |+.+|++. .+.+++.||+.
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~---v~~~~~~Vd~d~---~~~la~~~~V~ 90 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ---FDWQVAVADLEQ---SEAIGDRFNVR 90 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT---SCCEEEEECHHH---HHHHHHTTTCC
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc---cceeEEEEECCC---CHHHHHhcCCC
Confidence 4677888998887766555555554 34 33 888999999999999 77 88 99999875 45788999995
Q ss_pred CCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCcc
Q 015368 341 GNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 341 ~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
. .|.++++..+.....+.|..+.+.|.+|++..++...
T Consensus 91 ~--iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 91 R--FPATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp S--SSEEEEESCC----CEESCCCHHHHHHHHHHHHC---
T ss_pred c--CCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhcccc
Confidence 4 6888888543344557888899999999999987644
No 346
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.03 E-value=1.1e-05 Score=61.11 Aligned_cols=66 Identities=15% Similarity=0.371 Sum_probs=46.5
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcc--c-----HhHHHHcCCCcCcEEEEEeC
Q 015368 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYL--E-----KDLAKEYNILAYPTLYLFVA 136 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~--~-----~~~~~~~~i~~~Pt~~~~~~ 136 (408)
+.+++.+.+++ ++.|+++|||+|++..+.+++. ++.+-.+|++. + ..+.+..|..++|++++ +
T Consensus 8 ~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~ 77 (114)
T 3h8q_A 8 RHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSL------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--N 77 (114)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--T
T ss_pred HHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--C
Confidence 45666665554 3339999999999999888764 35566666663 2 23557788999999865 7
Q ss_pred CeE
Q 015368 137 GVR 139 (408)
Q Consensus 137 g~~ 139 (408)
|+.
T Consensus 78 g~~ 80 (114)
T 3h8q_A 78 KVH 80 (114)
T ss_dssp TEE
T ss_pred CEE
Confidence 853
No 347
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.00 E-value=2e-05 Score=60.61 Aligned_cols=102 Identities=9% Similarity=0.114 Sum_probs=75.9
Q ss_pred Eeecccccc-----ccccCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEE--cCCcccccchhhhccC
Q 015368 269 VTLTIHNAQ-----FVFQDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVE--MNSEGVGRRVSQEFGV 339 (408)
Q Consensus 269 ~~lt~~~~~-----~~~~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd--~~~~~~~~~l~~~~~i 339 (408)
..++..++. .....+.++++ ++.+||. |......+.+++.++.++ +.|+.+| ++. ...+++.||+
T Consensus 7 ~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~---v~~~~v~~~~d~---~~~~~~~~~v 80 (126)
T 2l57_A 7 KQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGK---FNIYYARLEEEK---NIDLAYKYDA 80 (126)
T ss_dssp SCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSS---CEEEEEETTSSH---HHHHHHHTTC
T ss_pred CCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCC---eEEEEEeCCCCc---hHHHHHHcCC
Confidence 344555544 33444555555 4556676 899999999999999877 9999999 664 3578899999
Q ss_pred CCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcC
Q 015368 340 SGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 340 ~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
. ..|.+++++.+|+ .+.+.|..+.+++.+|++..+..
T Consensus 81 ~--~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 81 N--IVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp C--SSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred c--ceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 5 3789999886444 45577888999999999988765
No 348
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.95 E-value=3.9e-05 Score=58.92 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=71.3
Q ss_pred CCcccccChhHHHHHhcc----CCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCC
Q 015368 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (408)
..+..+.+.++++..+.. ++.+++.|+.+||.++.. .+..+++...++.|..+ .+.+++++|++. +.
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~---~~ 92 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQ---AM 92 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCC---SS
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCC---cc
Confidence 456778888999888864 778999999999988543 45555533346777765 466899999998 59
Q ss_pred CeEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 232 p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
|++++++.+ .....+.| .+.+++.+||+.
T Consensus 93 Pt~~~~~~G-~~~~~~~G-~~~~~l~~~l~~ 121 (124)
T 1xfl_A 93 PTFMFLKEG-KILDKVVG-AKKDELQSTIAK 121 (124)
T ss_dssp SEEEEEETT-EEEEEEES-CCHHHHHHHHHH
T ss_pred CEEEEEECC-EEEEEEeC-CCHHHHHHHHHH
Confidence 999998644 23445677 588999999875
No 349
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.93 E-value=1.8e-05 Score=58.63 Aligned_cols=96 Identities=7% Similarity=0.029 Sum_probs=69.8
Q ss_pred CCcccccChhHHHHHhccCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCH----hHHhhcCCCCCCCC
Q 015368 162 LGTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSA----DVAEFFHIHPKSKR 231 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~----~l~~~~~i~~~~~~ 231 (408)
.....|+|.++++++++.+++++|.|+++||+++.. .|.+.+. ..++.|+.+ ... .++++++|.. ..
T Consensus 6 ~~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~-~~~v~~~~vdVde~r~~Sn~IA~~~~V~h--~s 82 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLY-ERDMDGYYLIVQQERDLSDYIAKKTNVKH--ES 82 (112)
T ss_dssp GCEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHH-HHTCCEEEEEGGGGHHHHHHHHHHHTCCC--CS
T ss_pred cceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhc-cCCceEEEEEeecCchhhHHHHHHhCCcc--CC
Confidence 345678899999999998999999999999998554 4445543 256777764 333 3899999982 27
Q ss_pred CeEEEeecCCCcccccCCcCCHHHHHHHH
Q 015368 232 PALIFLHLEAGKATPFRHQFTRLAIANFV 260 (408)
Q Consensus 232 p~l~~~~~~~~~~~~y~g~~~~~~i~~fi 260 (408)
|++++|+++......-.+..+.++|.+.+
T Consensus 83 Pq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 83 PQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 99999998753333344667777777654
No 350
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.93 E-value=7.5e-05 Score=52.70 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=63.2
Q ss_pred EEEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCccccCCCCCC
Q 015368 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELT 364 (408)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~~~~~~ 364 (408)
++.++.+++. |....+.++++++++.++ +.|+.+|.++. ..+.+.+|+.. .|.+++ +|+. .+.|..+
T Consensus 6 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~---~~~~~~~~v~~--~Pt~~~---~G~~-~~~G~~~ 73 (85)
T 1fo5_A 6 IELFTSPMCPHCPAAKRVVEEVANEMPDA---VEVEYINVMEN---PQKAMEYGIMA--VPTIVI---NGDV-EFIGAPT 73 (85)
T ss_dssp EEEEECCCSSCCCTHHHHHHHHHHHCSSS---EEEEEEESSSS---CCTTTSTTTCC--SSEEEE---TTEE-ECCSSSS
T ss_pred EEEEeCCCCCchHHHHHHHHHHHHHcCCc---eEEEEEECCCC---HHHHHHCCCcc--cCEEEE---CCEE-eeecCCC
Confidence 3445666776 899999999999999988 99999998764 47788999953 688888 3554 6778788
Q ss_pred hHHHHHHHHHHh
Q 015368 365 LSSIKSFGEEFL 376 (408)
Q Consensus 365 ~~~i~~Fi~~~~ 376 (408)
.+++.+|+++.+
T Consensus 74 ~~~l~~~l~~~l 85 (85)
T 1fo5_A 74 KEALVEAIKKRL 85 (85)
T ss_dssp SHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 351
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.92 E-value=2.7e-05 Score=69.41 Aligned_cols=107 Identities=13% Similarity=0.228 Sum_probs=84.5
Q ss_pred CCceEeeccccccccccC--CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCC
Q 015368 265 HPLVVTLTIHNAQFVFQD--PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVS 340 (408)
Q Consensus 265 ~p~v~~lt~~~~~~~~~~--~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~ 340 (408)
.+.+.++|.+++..+... +.++++ |+.+||. |....+.+.++++++.++ +.|+.+|++.. +.+++.||+.
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---~~~~~vd~~~~---~~~~~~~~v~ 79 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ---FILAKLDCDAE---QMIAAQFGLR 79 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS---SEEEEEETTTC---HHHHHTTTCC
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC---eEEEEEeCccC---HHHHHHcCCC
Confidence 467899999999987764 445544 6667887 999999999999999998 99999999864 5888999995
Q ss_pred CCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcCc
Q 015368 341 GNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 341 ~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
. .|.++++..+.....+.|..+.+.+.+|++..+.+.
T Consensus 80 ~--~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp~~ 116 (287)
T 3qou_A 80 A--IPTVYLFQNGQPVDGFQGPQPEEAIRALLDXVLPRE 116 (287)
T ss_dssp S--SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCH
T ss_pred C--CCeEEEEECCEEEEEeeCCCCHHHHHHHHHHHcCCc
Confidence 3 678887754333334778889999999999877543
No 352
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.91 E-value=8.1e-05 Score=57.96 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=73.1
Q ss_pred CCCcccccChhHHHHHhcc--CCeEEEEEecCCCCcCHHHH------HHHhccCCceeEEEec-------CHhHHhhcCC
Q 015368 161 TLGTYSITTTDEAERILTV--ESKLVLGFLHDLEGMESEEL------AAASKLHSDVNFYQTT-------SADVAEFFHI 225 (408)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~~--~~~~vi~f~~~~~~~~~~~~------~~~a~~~~~~~f~~~~-------~~~l~~~~~i 225 (408)
.+.+..+.+.++++..+.. ++.++|.|+.+||.++.... ..+++...++.+..+. ...++++|++
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v 89 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNV 89 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTC
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCC
Confidence 3556668888888877754 67899999999999865543 3444333357776542 3568899999
Q ss_pred CCCCCCCeEEEeecCCCcc--cccCCcCCHHHHHHHHhcC
Q 015368 226 HPKSKRPALIFLHLEAGKA--TPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 226 ~~~~~~p~l~~~~~~~~~~--~~y~g~~~~~~i~~fi~~~ 263 (408)
. +.|+++++..++... ..+.|..+.++|.++++..
T Consensus 90 ~---~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 90 L---GLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp C---SSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred C---CCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 8 599999995544333 5788999999999999764
No 353
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.91 E-value=2e-05 Score=60.19 Aligned_cols=104 Identities=10% Similarity=0.165 Sum_probs=77.0
Q ss_pred CCceEeeccccccccccC----CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhcc
Q 015368 265 HPLVVTLTIHNAQFVFQD----PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFG 338 (408)
Q Consensus 265 ~p~v~~lt~~~~~~~~~~----~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~ 338 (408)
.+.+..++.+++...... +.+.++ ++.+|+. |....+.+.++++++.+ +.|+.+|++.. ..+++.||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~---~~~~~~~~ 84 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN----AVFLKVDVDEL---KPIAEQFS 84 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTC---HHHHHHTT
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC----cEEEEEECCCC---HHHHHHcC
Confidence 355667777777766643 445555 4555665 88999999999999875 89999998863 47889999
Q ss_pred CCCCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhcC
Q 015368 339 VSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 339 i~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
+.. .|.++++..+.....+.|.. .+++.+|++.++.+
T Consensus 85 v~~--~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 85 VEA--MPTFLFMKEGDVKDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp CCS--SSEEEEEETTEEEEEEESSC-HHHHHHHHHHHHSC
T ss_pred CCc--ccEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhcc
Confidence 954 67888775433344567766 89999999998765
No 354
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.90 E-value=5.2e-05 Score=56.76 Aligned_cols=103 Identities=11% Similarity=0.160 Sum_probs=75.7
Q ss_pred CceEeeccccccccccC--CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCC
Q 015368 266 PLVVTLTIHNAQFVFQD--PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSG 341 (408)
Q Consensus 266 p~v~~lt~~~~~~~~~~--~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~ 341 (408)
..+..++.+++...... +.+.++ ++.+|+. |....+.+.+++.++++ +.|+.+|+++. ...+++.||+..
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~----v~~~~vd~~~~--~~~~~~~~~v~~ 78 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD----VIFLKLDCNQE--NKTLAKELGIRV 78 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSST--THHHHHHHCCSB
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC----eEEEEEecCcc--hHHHHHHcCCCe
Confidence 45778898998877763 445555 4556666 89999999999999874 89999998732 357889999954
Q ss_pred CCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhc
Q 015368 342 NAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 342 ~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
.|.++++..+.....+.|. +.+++.+||+++++
T Consensus 79 --~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 79 --VPTFKILKENSVVGEVTGA-KYDKLLEAIQAARS 111 (111)
T ss_dssp --SSEEEEESSSSEEEEEESS-CHHHHHHHHHHHHC
T ss_pred --eeEEEEEeCCcEEEEEcCC-CHHHHHHHHHHhhC
Confidence 6787776543333445665 48899999998763
No 355
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.88 E-value=3.1e-05 Score=58.78 Aligned_cols=96 Identities=8% Similarity=0.122 Sum_probs=68.3
Q ss_pred CcccccChhHHHHHh-ccCC--eEEEEEecCCCCc---CHHHHHHHhccCCceeEEEecCHhHHhhcCCCCCCCCCeEEE
Q 015368 163 GTYSITTTDEAERIL-TVES--KLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIF 236 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~-~~~~--~~vi~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~~ 236 (408)
.+.++ +.+++...+ +... .+++.|+++||.+ ..+.+..+|+...++.|..+.-.+..++|++. +.|++++
T Consensus 4 ~v~~i-t~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~~~~~~v~---~~PT~~~ 79 (118)
T 3evi_A 4 ELREI-SGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSCIQHYHDN---CLPTIFV 79 (118)
T ss_dssp SCEEC-CGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGTSTTCCGG---GCSEEEE
T ss_pred ceEEe-CHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHhHHHCCCC---CCCEEEE
Confidence 45667 446665554 4443 7888899999987 45567777754567999988666667899998 5999999
Q ss_pred eecCCCcccccCC-------cCCHHHHHHHHhcC
Q 015368 237 LHLEAGKATPFRH-------QFTRLAIANFVTHT 263 (408)
Q Consensus 237 ~~~~~~~~~~y~g-------~~~~~~i~~fi~~~ 263 (408)
|+++. ....+.| .++.++|..|+.++
T Consensus 80 fk~G~-~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 80 YKNGQ-IEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EETTE-EEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EECCE-EEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 99764 2222222 46789999999764
No 356
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.88 E-value=2.8e-05 Score=58.91 Aligned_cols=98 Identities=12% Similarity=0.261 Sum_probs=72.3
Q ss_pred eEeecc-cccccccc--CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCC
Q 015368 268 VVTLTI-HNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGN 342 (408)
Q Consensus 268 v~~lt~-~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 342 (408)
+.+++. +++..... .+.+.++ ++.+|+. |....+.+.++++++ + +.|+.+|++.. ..+++.+|+..
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~---~~~~~vd~~~~---~~~~~~~~v~~- 85 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--D---AIFVKVDVDKL---EETARKYNISA- 85 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--S---SEEEEEETTTS---HHHHHHTTCCS-
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--C---cEEEEEECCcc---HHHHHHcCCCc-
Confidence 566676 77776665 4555555 4556666 899999999999998 5 89999998763 47889999954
Q ss_pred CCcEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 343 APRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 343 ~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
.|.++++..+.....+.| .+.+++.+|+++++
T Consensus 86 -~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 86 -MPTFIAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp -SSEEEEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred -cceEEEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 678887754333344667 68899999998763
No 357
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.87 E-value=6.7e-05 Score=59.65 Aligned_cols=95 Identities=22% Similarity=0.293 Sum_probs=71.8
Q ss_pred cccccChhHHHHHh--ccCCeEEEEEecCCCCcCHH---HHHHHh-ccCCceeEEEe---cCHhHHhhcCCCCCCCCCeE
Q 015368 164 TYSITTTDEAERIL--TVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (408)
Q Consensus 164 ~~~i~~~~~~~~~~--~~~~~~vi~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l 234 (408)
+..+.+.++++..+ ..+++++|.|+++||.++.. .+..++ ++.+++.|+.+ .+.+++++|++. +.|++
T Consensus 5 l~~i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~---~~Pt~ 81 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDIS---YIPST 81 (149)
T ss_dssp CCEECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCC---SSSEE
T ss_pred eeecCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCC---ccCeE
Confidence 44567888898888 45789999999999998544 455666 45555887765 566799999998 59999
Q ss_pred EEeecCCCcc---------cccCC-cCCHHHHHHHHhc
Q 015368 235 IFLHLEAGKA---------TPFRH-QFTRLAIANFVTH 262 (408)
Q Consensus 235 ~~~~~~~~~~---------~~y~g-~~~~~~i~~fi~~ 262 (408)
++++.+. .. ..+.| ..+.+++.++++.
T Consensus 82 ~~~~~G~-~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~ 118 (149)
T 3gix_A 82 VFFFNGQ-HMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 118 (149)
T ss_dssp EEEETTE-EEEEECSSSCCSCEESCCSSHHHHHHHHHH
T ss_pred EEEECCe-EEEeecCCCCCCeEeeecCCHHHHHHHHHH
Confidence 9887653 33 46778 6788899888875
No 358
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.86 E-value=6.3e-05 Score=57.06 Aligned_cols=95 Identities=9% Similarity=0.068 Sum_probs=69.3
Q ss_pred CcccccChhHHHHHhccCCeEEEEEecCCCCcCHH---HHHHHh-ccCCceeEEEec-------CHhHHhhcCCCCCCCC
Q 015368 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAAS-KLHSDVNFYQTT-------SADVAEFFHIHPKSKR 231 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~---~~~~~a-~~~~~~~f~~~~-------~~~l~~~~~i~~~~~~ 231 (408)
.+..+ +.++++..+..++.+++.|+++||.++.. .+..++ ++...+.+..+. ...+++++++. +.
T Consensus 13 ~~~~~-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~---~~ 88 (118)
T 1zma_A 13 DLEVT-TVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIP---TV 88 (118)
T ss_dssp TSEEC-CHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCC---SS
T ss_pred hhhcC-CHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCC---CC
Confidence 34444 67888888888888999999999998544 345555 344455555332 13678899998 59
Q ss_pred CeEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 232 p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
|++++++.+ .....+.|..+.++|.+||++
T Consensus 89 Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 89 PGFVHITDG-QINVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp CEEEEEETT-EEEEECCTTCCHHHHHHHHTC
T ss_pred CeEEEEECC-EEEEEecCCCCHHHHHHHhhC
Confidence 999999754 345678899999999999863
No 359
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.86 E-value=3.7e-05 Score=57.69 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=70.3
Q ss_pred CCcccccChhHHHHHhcc----CCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCC
Q 015368 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (408)
..+..+.+.++++..+.. ++.+++.|+.+||.++.. .+..+++...++.|..+ .+.++++++++. +.
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~---~~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVE---AM 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCS---ST
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCC---cc
Confidence 346778888899888864 778899999999988544 44555543346777765 456799999998 59
Q ss_pred CeEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 232 p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
|++++++.+ .....+.| .+.+.+.+||..
T Consensus 81 Pt~~~~~~G-~~~~~~~g-~~~~~l~~~l~~ 109 (113)
T 1ti3_A 81 PTFIFLKDG-KLVDKTVG-ADKDGLPTLVAK 109 (113)
T ss_dssp TEEEEEETT-EEEEEEEC-CCTTHHHHHHHH
T ss_pred cEEEEEeCC-EEEEEEec-CCHHHHHHHHHH
Confidence 999999643 23345667 577888888865
No 360
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.85 E-value=8.7e-06 Score=62.99 Aligned_cols=70 Identities=10% Similarity=0.254 Sum_probs=48.3
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHHhh-hHHHHHHHHHhcCCcEEEEEeCccc-------HhHHHHcCCCcCcEEEEEe
Q 015368 64 KNFSEFMGKNRNVMVMFYANWCYWSKKL-APEFAAAAKMLKGEADLVMVDAYLE-------KDLAKEYNILAYPTLYLFV 135 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~-~p~~~~~~~~~~~~v~~~~v~~~~~-------~~~~~~~~i~~~Pt~~~~~ 135 (408)
+.++..+..++ ++.|+++||++|++. .+.+.+.... .+.+..+|++.+ .++.+.+|..++|++ |.
T Consensus 28 ~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~---~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi 100 (129)
T 3ctg_A 28 AHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNVP---KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YI 100 (129)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCCC---GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EE
T ss_pred HHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCcc---CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EE
Confidence 45556665554 667899999999998 7777654311 255666666543 357788999999996 55
Q ss_pred CCeEe
Q 015368 136 AGVRQ 140 (408)
Q Consensus 136 ~g~~~ 140 (408)
+|+.+
T Consensus 101 ~g~~i 105 (129)
T 3ctg_A 101 NGKHI 105 (129)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 78543
No 361
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.84 E-value=6.4e-05 Score=56.86 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=71.7
Q ss_pred CCcccccChhHHHHHhcc----CCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCC
Q 015368 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (408)
..+..+.+.++++..+.. ++.+++.|+.+||.++.. .+..+++...++.|..+ .+.++++++++. +.
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~---~~ 82 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVE---AM 82 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCC---SB
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCC---cC
Confidence 456778888999888864 778999999999988544 45555543346777665 456789999998 59
Q ss_pred CeEEEeecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 232 p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
|++++++.+. ....+.| .+.+++.+||...
T Consensus 83 Pt~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 83 PTFLFIKDGE-KVDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp SEEEEEETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred cEEEEEeCCe-EEEEecC-CCHHHHHHHHHHH
Confidence 9999996442 3445677 5788999998753
No 362
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.81 E-value=6.2e-05 Score=53.16 Aligned_cols=79 Identities=14% Similarity=0.135 Sum_probs=63.3
Q ss_pred EEEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCccccCCCCCC
Q 015368 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELT 364 (408)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~~~~~~ 364 (408)
++.++.+++. |....+.++++++++.++ +.|+.+|.+.. ..+.+.+|+.. .|.+++ +|+. .+.|..+
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~~~vd~~~~---~~~~~~~~v~~--~Pt~~~---~G~~-~~~G~~~ 72 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDK---IDVEKIDIMVD---REKAIEYGLMA--VPAIAI---NGVV-RFVGAPS 72 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSS---CCEEEECTTTC---GGGGGGTCSSC--SSEEEE---TTTE-EEECSSC
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCC---eEEEEEECCCC---HHHHHhCCcee--eCEEEE---CCEE-EEccCCC
Confidence 4455667776 899999999999999988 99999998764 47788999953 688888 3444 5677778
Q ss_pred hHHHHHHHHHHh
Q 015368 365 LSSIKSFGEEFL 376 (408)
Q Consensus 365 ~~~i~~Fi~~~~ 376 (408)
.+++.+|+++.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 363
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.81 E-value=4.3e-05 Score=57.18 Aligned_cols=66 Identities=23% Similarity=0.362 Sum_probs=48.1
Q ss_pred hhHHHHHcCCCcEEEEEec-----CCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHh----HHHHcCCCcCcEEEEE
Q 015368 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYNILAYPTLYLF 134 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a-----~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~i~~~Pt~~~~ 134 (408)
+.++..+..++ ++| |+. +||++|++..+.+++. ++.+..+|++++++ +.+..|..++|++ |
T Consensus 6 ~~~~~~i~~~~-vvv-y~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i--f 75 (109)
T 1wik_A 6 SGLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL--Y 75 (109)
T ss_dssp CCHHHHHTTSS-EEE-EESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--E
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--E
Confidence 44667776554 444 666 9999999998888653 57889999988764 4456688999985 4
Q ss_pred eCCeE
Q 015368 135 VAGVR 139 (408)
Q Consensus 135 ~~g~~ 139 (408)
.+|+.
T Consensus 76 i~g~~ 80 (109)
T 1wik_A 76 VRGDL 80 (109)
T ss_dssp CSSSE
T ss_pred ECCEE
Confidence 57753
No 364
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.74 E-value=8.2e-05 Score=56.93 Aligned_cols=104 Identities=10% Similarity=0.140 Sum_probs=75.6
Q ss_pred CCceEeecccccccccc--CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCC
Q 015368 265 HPLVVTLTIHNAQFVFQ--DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVS 340 (408)
Q Consensus 265 ~p~v~~lt~~~~~~~~~--~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~ 340 (408)
...+..++.+++..... .+.+.++ ++.+|+. |....+.+.++++++.+ +.|+.+|+++. ...+++.||+.
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~vd~~~~--~~~~~~~~~v~ 90 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD----VIFLKLDCNQE--NKTLAKELGIR 90 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEECSST--THHHHHHHCCS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC----CEEEEEecCcc--hHHHHHHcCCC
Confidence 34577888888887665 3445555 4556666 89999999999999874 89999998732 35788999995
Q ss_pred CCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhc
Q 015368 341 GNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 341 ~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
. .|.++++..+.....+.|.. .+++.++++++++
T Consensus 91 ~--~Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~~ 124 (124)
T 1faa_A 91 V--VPTFKILKENSVVGEVTGAK-YDKLLEAIQAARS 124 (124)
T ss_dssp S--SSEEEEEETTEEEEEEESSC-HHHHHHHHHHHTC
T ss_pred e--eeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 4 67877775433334456653 8899999998753
No 365
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.72 E-value=9e-05 Score=58.00 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=72.2
Q ss_pred CCCcccccChhHHHHHhc----cCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCC
Q 015368 161 TLGTYSITTTDEAERILT----VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSK 230 (408)
Q Consensus 161 ~~~~~~i~~~~~~~~~~~----~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~ 230 (408)
+..+..+.+.++++..+. .++.+++.|+.+||.++.. .+..+++..+++.|..+ .+.+++++|++. +
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~---~ 99 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIK---A 99 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCC---E
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCC---c
Confidence 345677888888888774 4778999999999998544 45555543356777765 567799999998 5
Q ss_pred CCeEEEeecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 231 RPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 231 ~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
.|++++++.+ .....+.|. +.+++.+||...
T Consensus 100 ~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 100 TPTFFFLRDG-QQVDKLVGA-NKPELHKKITAI 130 (139)
T ss_dssp ESEEEEEETT-EEEEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEcCC-eEEEEEeCC-CHHHHHHHHHHH
Confidence 9999999543 344566777 788999998754
No 366
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.68 E-value=0.0003 Score=58.94 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=65.6
Q ss_pred CCCcEEEEEecCCChhHHhhhHHH-HHHHHHhc--CCcEEEEEeCcc---------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKMLK--GEADLVMVDAYL--------------------------------- 115 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~-~~~~~~~~--~~v~~~~v~~~~--------------------------------- 115 (408)
..++++|.|....||+|+++.+.+ ..+.+.|. +++.|...+.--
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~~ 107 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEK 107 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHHh
Confidence 457899999999999999999986 56666773 477777665310
Q ss_pred --------------------------------------------cHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHH
Q 015368 116 --------------------------------------------EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDV 151 (408)
Q Consensus 116 --------------------------------------------~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~ 151 (408)
+...++++||.|+||+++ +|+. +.|..+.+.
T Consensus 108 ~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~---~~G~~~~e~ 182 (202)
T 3gha_A 108 QPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV---IKNFADYDE 182 (202)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE---CSCTTCHHH
T ss_pred CccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE---ecCCCCHHH
Confidence 012346689999999987 8843 679999999
Q ss_pred HHHHHHhHhCCC
Q 015368 152 ISAWVREKMTLG 163 (408)
Q Consensus 152 l~~~i~~~~~~~ 163 (408)
|.+.|.+.+...
T Consensus 183 l~~~i~~~~~~~ 194 (202)
T 3gha_A 183 IKETIEKELKGK 194 (202)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999998876443
No 367
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.67 E-value=0.0019 Score=62.53 Aligned_cols=171 Identities=12% Similarity=0.021 Sum_probs=116.7
Q ss_pred CCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCe-EeEEeeCCCCHHH
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGV-RQFQFFGERTRDV 151 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~-~~~~~~g~~~~~~ 151 (408)
.+++-+.++...|..|.++...++++++. .+++.+...+ .. . ...|++.+.++|+ .-.+|.|-..-.+
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~--~~-~-------~~~p~~~~~~~~~~~~i~f~g~p~g~e 86 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN--TL-P-------VRKPSFLITNPGSQQGPRFAGSPLGHE 86 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT--TS-S-------SCSSEEEEECTTCCCSCEEESCCCGGG
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC--Cc-c-------cCCCEEEEecCCCcceEEEeccCcchh
Confidence 35677777778899999999988888765 4467763322 11 0 4579999988763 3478888877777
Q ss_pred HHHHHHhHh--CCCcccccChhHHHHHhcc-CCeEEEEEecCCCCcCHHH---HHHHhccCCceeEEEe---cCHhHHhh
Q 015368 152 ISAWVREKM--TLGTYSITTTDEAERILTV-ESKLVLGFLHDLEGMESEE---LAAASKLHSDVNFYQT---TSADVAEF 222 (408)
Q Consensus 152 l~~~i~~~~--~~~~~~i~~~~~~~~~~~~-~~~~vi~f~~~~~~~~~~~---~~~~a~~~~~~~f~~~---~~~~l~~~ 222 (408)
+..|+.-.+ ......+ +.+.++.+... .+..+..|+.+||.++... +..++....++.+..+ ..++++++
T Consensus 87 ~~s~~~~l~~~~~~~~~~-~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~ 165 (521)
T 1hyu_A 87 FTSLVLALLWTGGHPSKE-AQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITE 165 (521)
T ss_dssp HHHHHHHHHHHTTCCCCS-CHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhHHHHHH
Confidence 777776553 2222333 55556655433 4566777889999996544 5555544457877764 56789999
Q ss_pred cCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 223 FHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 223 ~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
+++. +.|++++ + + .. ...|..+.++|.+|+...
T Consensus 166 ~~i~---svPt~~i--~-g-~~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 166 RNVM---GVPAVFV--N-G-KE-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp TTCC---SSSEEEE--T-T-EE-EEESCCCHHHHHHHHCCS
T ss_pred hCCC---ccCEEEE--C-C-EE-EecCCCCHHHHHHHHhhc
Confidence 9998 5899986 2 2 22 344888889999998764
No 368
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=96.82 E-value=6.7e-06 Score=60.94 Aligned_cols=100 Identities=19% Similarity=0.223 Sum_probs=73.3
Q ss_pred eEeeccccccccc-cCCccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCC
Q 015368 268 VVTLTIHNAQFVF-QDPRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 268 v~~lt~~~~~~~~-~~~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 344 (408)
+.+++.+++.... ..+.+.++. +.+++. |....+.+++++.++.++ +.|+.+|++.. ..+++.+|+.. .
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~---~~~~~~~~v~~--~ 74 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK---VKVVKVNVDEN---PNTAAQYGIRS--I 74 (106)
Confidence 3566777776443 444455554 455665 889999999999999887 99999998764 47788999954 6
Q ss_pred cEEEEEccCCccccCCCCCChHHHHHHHHHH
Q 015368 345 RVIAYSARDAKKYVLNGELTLSSIKSFGEEF 375 (408)
Q Consensus 345 p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~ 375 (408)
|.++++..+.....+.|..+.+++.+|+++.
T Consensus 75 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 75 PTLLLFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 7888774344455677888889999998865
No 369
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.64 E-value=0.00012 Score=55.54 Aligned_cols=101 Identities=18% Similarity=0.211 Sum_probs=70.5
Q ss_pred CCccccc-ChhHHHH-HhccCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCe
Q 015368 162 LGTYSIT-TTDEAER-ILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPA 233 (408)
Q Consensus 162 ~~~~~i~-~~~~~~~-~~~~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~ 233 (408)
+.+..+. +.++++. +.+.++.+++.|+.+||.++.. .+..+++...++.|..+ .+.+++++|++. +.|+
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~---~~Pt 79 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVS---SIPA 79 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC---SSSE
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCC---CCCE
Confidence 4456676 7788874 4456778999999999998544 45555532377888766 467899999998 5999
Q ss_pred EEEeecC---CCcccccCCcCCHHHHHHHHhcCCCC
Q 015368 234 LIFLHLE---AGKATPFRHQFTRLAIANFVTHTKHP 266 (408)
Q Consensus 234 l~~~~~~---~~~~~~y~g~~~~~~i~~fi~~~~~p 266 (408)
+++++.. +.....+.|.. ..+|.+.+.++..+
T Consensus 80 ~~~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 80 LFFVKKEGNEIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp EEEEEEETTEEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred EEEEeCCCCcceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 9999762 22334566764 56699998876544
No 370
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.61 E-value=7.8e-05 Score=57.50 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=72.1
Q ss_pred CCcccccChhHHHHHhcc----CCeEEEEEecCCCCc---CHHHHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCC
Q 015368 162 LGTYSITTTDEAERILTV----ESKLVLGFLHDLEGM---ESEELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKR 231 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~----~~~~vi~f~~~~~~~---~~~~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~ 231 (408)
..+..+.+.++++..+.. ++.+++.|+.+||.+ ..+.+..+++...++.|..+ .+.+++++|++. +.
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~---~~ 90 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVE---AM 90 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCC---SS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCC---cc
Confidence 456778888888888854 678888899999887 45666666643346777765 456799999998 59
Q ss_pred CeEEEeecCCCcccccCCcCCHHHHHHHHhcCC
Q 015368 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (408)
Q Consensus 232 p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (408)
|++++++.+ .....+.| .+.+++.+||....
T Consensus 91 Pt~~~~~~g-~~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 91 PTFLFIKDG-AEADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp CCCCBCTTT-TCCBCCCT-TCTTTHHHHHHHHT
T ss_pred ceEEEEeCC-eEEEEEeC-CCHHHHHHHHHHHH
Confidence 999988543 34456677 57788988887643
No 371
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.57 E-value=0.00017 Score=56.13 Aligned_cols=98 Identities=10% Similarity=0.079 Sum_probs=69.7
Q ss_pred CCcccccChhHHHHHhccC---CeEEEEEecCCCCcC---HHHHHHHhccCCceeEEEecCHhHHhhcCCCCCCCCCeEE
Q 015368 162 LGTYSITTTDEAERILTVE---SKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALI 235 (408)
Q Consensus 162 ~~~~~i~~~~~~~~~~~~~---~~~vi~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~ 235 (408)
..+..+ +.+++...+... ..++|.|+++||.++ .+.+..++....++.|+.+......++|++. +.|+++
T Consensus 10 g~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~~~~~i~---~~Pt~~ 85 (135)
T 2dbc_A 10 GELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDN---CLPTIF 85 (135)
T ss_dssp CSCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSCSSCCSS---CCSEEE
T ss_pred CceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCcccCCCC---CCCEEE
Confidence 346677 778888877542 478889999999884 4456666644457888887555445789998 599999
Q ss_pred EeecCCCcccccCCc-------CCHHHHHHHHhcCC
Q 015368 236 FLHLEAGKATPFRHQ-------FTRLAIANFVTHTK 264 (408)
Q Consensus 236 ~~~~~~~~~~~y~g~-------~~~~~i~~fi~~~~ 264 (408)
+|+.+. ....+.|. ++.++|.+|+..+.
T Consensus 86 ~~~~G~-~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 86 VYKNGQ-IEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EESSSS-CSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEECCE-EEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 998543 33444443 37899999998753
No 372
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.54 E-value=8.7e-05 Score=58.00 Aligned_cols=98 Identities=13% Similarity=0.140 Sum_probs=67.2
Q ss_pred CcccccChhHHHHHhccCC--eEEEEEecCCCCc---CHHHHHHHh-ccCC-ceeEEEe---cCHhHHhhcCCCCC---C
Q 015368 163 GTYSITTTDEAERILTVES--KLVLGFLHDLEGM---ESEELAAAS-KLHS-DVNFYQT---TSADVAEFFHIHPK---S 229 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~--~~vi~f~~~~~~~---~~~~~~~~a-~~~~-~~~f~~~---~~~~l~~~~~i~~~---~ 229 (408)
.+..+ +.++++..+...+ +++|.|+++||.+ ..+.+..++ ++.+ ++.|+.+ .+.+++++|++... .
T Consensus 8 ~v~~l-~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 8 YIKYF-NDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp CCEEC-CTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSS
T ss_pred eEEEc-cHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcC
Confidence 34555 4577777776544 7899999999987 456667766 4553 7888876 46679999999610 1
Q ss_pred CCCeEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 230 KRPALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 230 ~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
+.|++++|+.+. ....+.|..+.+.+.+|+.+
T Consensus 87 ~~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 87 QLPTLILFQGGK-EAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp CSSEEEEESSSS-EEEEESCBCSSSCBCCCCCC
T ss_pred CCCEEEEEECCE-EEEEecCcCchHHHHHHHhc
Confidence 389999996542 44567777766666666543
No 373
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.54 E-value=0.00037 Score=54.77 Aligned_cols=98 Identities=10% Similarity=0.057 Sum_probs=70.3
Q ss_pred cccccccc-c-CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEE
Q 015368 273 IHNAQFVF-Q-DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIA 348 (408)
Q Consensus 273 ~~~~~~~~-~-~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~ 348 (408)
.+++.... . .+.++++ ++.+|+. |+...+.+.++++++.++ +.|+.+|++.. ..+++.|++.. .|.++
T Consensus 11 ~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~---~~~~~~~~i~~--~Pt~~ 82 (142)
T 1qgv_A 11 GWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---AVIYLVDITEV---PDFNKMYELYD--PCTVM 82 (142)
T ss_dssp HHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTC---CTTTTSSCSCS--SCEEE
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---eEEEEEccccC---HHHHHHcCCCC--CCEEE
Confidence 34454322 2 3445544 5667776 999999999999999888 99999999864 47889999953 67887
Q ss_pred EEccCCccc----------cCCCCCC-hHHHHHHHHHHhcCc
Q 015368 349 YSARDAKKY----------VLNGELT-LSSIKSFGEEFLEDK 379 (408)
Q Consensus 349 i~~~~~~~y----------~~~~~~~-~~~i~~Fi~~~~~gk 379 (408)
++.. |+.. .+.|.++ .+++.++|+.+++|.
T Consensus 83 ~~~~-G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~~ 123 (142)
T 1qgv_A 83 FFFR-NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGA 123 (142)
T ss_dssp EEET-TEEEEEECC------CCSCCSCHHHHHHHHHHHHHHH
T ss_pred EEEC-CcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHHH
Confidence 7754 3222 3456554 889999999988763
No 374
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=97.53 E-value=0.0002 Score=60.75 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=70.4
Q ss_pred CcccccChhHHHHHhccC---CeEEEEEecCCCCcC---HHHHHHHhccCCceeEEEec--CHhHHhhcCCCCCCCCCeE
Q 015368 163 GTYSITTTDEAERILTVE---SKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTT--SADVAEFFHIHPKSKRPAL 234 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~---~~~vi~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~--~~~l~~~~~i~~~~~~p~l 234 (408)
.+..+.+.+++...+... ..++|.|+.+||.++ .+.+..++.....+.|+.+. +..++..|++. ++|++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~~~~l~~~~~i~---~~PTl 176 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRASNTGAGDRFSSD---VLPTL 176 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHHHHTCSTTSCGG---GCSEE
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEECCcHHHHHHCCCC---CCCEE
Confidence 356677788888888543 689999999999985 44566666544678888763 34577889998 59999
Q ss_pred EEeecCCCcccccCCcC-------CHHHHHHHHhcCC
Q 015368 235 IFLHLEAGKATPFRHQF-------TRLAIANFVTHTK 264 (408)
Q Consensus 235 ~~~~~~~~~~~~y~g~~-------~~~~i~~fi~~~~ 264 (408)
++|+.+. ....+.|.. +.++|..||..+.
T Consensus 177 ~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 177 LVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 9998543 334455543 3489999998754
No 375
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.50 E-value=0.00039 Score=53.95 Aligned_cols=96 Identities=9% Similarity=0.054 Sum_probs=68.3
Q ss_pred CcccccChhHHHHHhcc--CCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe---cCHhHHhhcCCCCCCCCCeE
Q 015368 163 GTYSITTTDEAERILTV--ESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT---TSADVAEFFHIHPKSKRPAL 234 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~--~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~---~~~~l~~~~~i~~~~~~p~l 234 (408)
.+..+++.++++..+.. ++.++|.|+++||.++.. .+..+++.. ++.|..+ .+.+++++|++. +.|++
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v~---~~Pt~ 96 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNIK---ALPTF 96 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTCC---SSSEE
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCCC---CCCEE
Confidence 45677788888888865 358899999999998544 444444221 4566554 466799999998 59999
Q ss_pred EEee--cCCC-cccccCCcCCHHHHHHHHhcC
Q 015368 235 IFLH--LEAG-KATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 235 ~~~~--~~~~-~~~~y~g~~~~~~i~~fi~~~ 263 (408)
++|+ ++.+ ....+.|. +.++|.+||...
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 9996 3321 23456777 789999998754
No 376
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.49 E-value=0.00066 Score=57.89 Aligned_cols=91 Identities=13% Similarity=0.159 Sum_probs=64.7
Q ss_pred CCCcEEEEEecCCChhHHhhhHHH-HHHHHHh--cCCcEEEEEeCc----------------------------------
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKML--KGEADLVMVDAY---------------------------------- 114 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~-~~~~~~~--~~~v~~~~v~~~---------------------------------- 114 (408)
..+++++.|....||+|+++.+.+ .++.++| .+++.+...+.-
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~~~~s~~Aa~aa~aa~~~~~f~~~~~aLF~~q~~ 117 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDS 117 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSHHHHHHHHHGGGCCSHHHHHHHHHHHHHTGGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCCChhHHHHHHHHHHhhChHHHHHHHHHHHHhCHh
Confidence 356789999999999999999974 7788777 346666654420
Q ss_pred -------c---------------------------------cHhHHHH-cCCCcCcEEEEEe-CCeEe-----EEeeCCC
Q 015368 115 -------L---------------------------------EKDLAKE-YNILAYPTLYLFV-AGVRQ-----FQFFGER 147 (408)
Q Consensus 115 -------~---------------------------------~~~~~~~-~~i~~~Pt~~~~~-~g~~~-----~~~~g~~ 147 (408)
. +...+++ +||+|+||+++.. +|+.+ ....|..
T Consensus 118 ~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~ 197 (226)
T 3f4s_A 118 WNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYK 197 (226)
T ss_dssp SCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCC
T ss_pred hcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCccccccc
Confidence 0 0123567 9999999999876 77532 1334555
Q ss_pred CHHHHHHHHHhHhCC
Q 015368 148 TRDVISAWVREKMTL 162 (408)
Q Consensus 148 ~~~~l~~~i~~~~~~ 162 (408)
+.+.|.+.|.+.+..
T Consensus 198 ~~e~l~~~I~~~l~~ 212 (226)
T 3f4s_A 198 ELKYFTNVIDKLYGK 212 (226)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc
Confidence 599999999887743
No 377
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.44 E-value=0.00019 Score=55.30 Aligned_cols=103 Identities=12% Similarity=0.174 Sum_probs=74.0
Q ss_pred ecccccccccc----CCccEEE-EEeeCCC-chHHHHHH---HHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCC
Q 015368 271 LTIHNAQFVFQ----DPRKQLW-LFAPAYG-SDKVILTF---EEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSG 341 (408)
Q Consensus 271 lt~~~~~~~~~----~~~~~~i-~f~~~~~-~~~~~~~~---~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~ 341 (408)
++..++...+. .+.++++ ++.+||. |......+ ..++..+..+ +.++.+|++... ...+++.||+..
T Consensus 11 ~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~-~~~~~~~~~v~~ 86 (130)
T 2kuc_A 11 FRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH---FVNLKMDMEKGE-GVELRKKYGVHA 86 (130)
T ss_dssp CBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH---SEEEEECSSSTT-HHHHHHHTTCCS
T ss_pred cccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC---eEEEEEecCCcc-hHHHHHHcCCCC
Confidence 45556555442 3445555 4556676 88888888 6777777766 889999987433 457889999954
Q ss_pred CCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCc
Q 015368 342 NAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 342 ~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
.|.+++++.+|+ .+.+.|..+.+++.+||++.+.+.
T Consensus 87 --~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 87 --YPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp --SCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred --CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 789999876444 445778889999999999998764
No 378
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.40 E-value=0.0012 Score=56.88 Aligned_cols=98 Identities=12% Similarity=0.136 Sum_probs=70.1
Q ss_pred CcccccChhHHHHHhcc---CCeEEEEEecCCCCcC---HHHHHHHhccCCceeEEEecC--HhHHhhcCCCCCCCCCeE
Q 015368 163 GTYSITTTDEAERILTV---ESKLVLGFLHDLEGME---SEELAAASKLHSDVNFYQTTS--ADVAEFFHIHPKSKRPAL 234 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~---~~~~vi~f~~~~~~~~---~~~~~~~a~~~~~~~f~~~~~--~~l~~~~~i~~~~~~p~l 234 (408)
.+..|.+.+++...+.. +..++|.|+++||.++ .+.+..++.....+.|+.+.. ..++..|++. ++|++
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~~~l~~~~~I~---~~PTl 189 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKASNTGAGDRFSSD---VLPTL 189 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHHHCCTTSSCTT---TCSEE
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEEeCCcHHHHHHCCCC---CCCEE
Confidence 45677788888888843 6788999999999985 445666664445688887643 3477889998 59999
Q ss_pred EEeecCCCcccccCC-------cCCHHHHHHHHhcCC
Q 015368 235 IFLHLEAGKATPFRH-------QFTRLAIANFVTHTK 264 (408)
Q Consensus 235 ~~~~~~~~~~~~y~g-------~~~~~~i~~fi~~~~ 264 (408)
++|+.+. ....+.| .++.+.|..||..+.
T Consensus 190 l~~~~G~-~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 190 LVYKGGE-LLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEETTE-EEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEECCE-EEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 9998543 2222222 256789999998864
No 379
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.36 E-value=0.00055 Score=53.22 Aligned_cols=96 Identities=14% Similarity=0.015 Sum_probs=69.2
Q ss_pred CcccccChhHHHHHhccCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe------------cCHhHHhhcCCCC
Q 015368 163 GTYSITTTDEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT------------TSADVAEFFHIHP 227 (408)
Q Consensus 163 ~~~~i~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~------------~~~~l~~~~~i~~ 227 (408)
.+..+ +.++++..+.. +++|.|+++||.++.. .+..+++..+ +.|..+ .+.+++++|++.
T Consensus 17 ~v~~l-~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~- 91 (135)
T 3emx_A 17 RLIYI-TPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVE- 91 (135)
T ss_dssp EEEEC-CHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCC-
T ss_pred ceeec-CHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCc-
Confidence 45556 66888888876 8888999999998655 4455553333 666543 345688899998
Q ss_pred CCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCCCC
Q 015368 228 KSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHP 266 (408)
Q Consensus 228 ~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p 266 (408)
+.|++++++.+ .....+.|..+.+.+..|++...-+
T Consensus 92 --~~Pt~~~~~~G-~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 92 --GTPTLVFYKEG-RIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp --SSSEEEEEETT-EEEEEEESCCCHHHHHHHHHHHC--
T ss_pred --eeCeEEEEcCC-EEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 59999999943 3556788999999999999876544
No 380
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.00025 Score=54.40 Aligned_cols=70 Identities=16% Similarity=0.209 Sum_probs=44.7
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccH-----hHHHHcCCCcCcEEEEEeCCe
Q 015368 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-----DLAKEYNILAYPTLYLFVAGV 138 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~-----~~~~~~~i~~~Pt~~~~~~g~ 138 (408)
++|++++..++ ++.|..+||++|++....+.+.. .++-.+..+.||.+.++ .+.+..|...+|++++ +|+
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~~-~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI--~G~ 79 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENEY-QFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV--NGV 79 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHHE-EEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE--TTE
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHhc-ccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE--CCE
Confidence 46777776654 66789999999999998887731 11213444444443322 2334468899999854 774
No 381
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.35 E-value=0.0013 Score=53.89 Aligned_cols=87 Identities=10% Similarity=0.242 Sum_probs=62.7
Q ss_pred CCCcEEEEEe-cCCChhHH-hhhHHHHHHHHHh-cC-CcE-EEEEeCcc----------------------cHhHHHHcC
Q 015368 72 KNRNVMVMFY-ANWCYWSK-KLAPEFAAAAKML-KG-EAD-LVMVDAYL----------------------EKDLAKEYN 124 (408)
Q Consensus 72 ~~~~~~v~f~-a~wC~~C~-~~~p~~~~~~~~~-~~-~v~-~~~v~~~~----------------------~~~~~~~~~ 124 (408)
.++++++.|| +.||+.|- .+.+.|.+.+.++ +. ++. ++.|.++. +.++++.||
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yG 121 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMN 121 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhC
Confidence 4667777666 57999999 8999999999998 65 674 78777653 346788888
Q ss_pred CC-----------cCcEEEEEeCCeEeEEeeCC-------------CCHHHHHHHHHh
Q 015368 125 IL-----------AYPTLYLFVAGVRQFQFFGE-------------RTRDVISAWVRE 158 (408)
Q Consensus 125 i~-----------~~Pt~~~~~~g~~~~~~~g~-------------~~~~~l~~~i~~ 158 (408)
+. ....++++++|++...+... .+++++.++|++
T Consensus 122 v~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 122 MLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp CEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 73 24567888899776655322 457777777753
No 382
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.28 E-value=0.00051 Score=53.15 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=66.6
Q ss_pred CccEEE-EEeeCCC-chHHHHHHH--HHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCC-CCCcEEEEEccCCc-c
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFE--EVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSG-NAPRVIAYSARDAK-K 356 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~--~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~-~~~p~i~i~~~~~~-~ 356 (408)
+.++++ ++.+||. |......|. +++.++.++ +.++.+|+++.+-...+++.||+.. ...|.+++++.+|+ .
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~---~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH---FEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR 105 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH---CEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEE
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC---EEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEE
Confidence 445444 5556776 889999999 999999777 9999999832211458889999932 23789999976444 4
Q ss_pred ccCCC-------CCChHHHHHHHHHHh
Q 015368 357 YVLNG-------ELTLSSIKSFGEEFL 376 (408)
Q Consensus 357 y~~~~-------~~~~~~i~~Fi~~~~ 376 (408)
+...| ..+.+++.+|++.+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHhc
Confidence 44555 578999999999875
No 383
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.27 E-value=0.00035 Score=53.37 Aligned_cols=101 Identities=8% Similarity=0.023 Sum_probs=69.9
Q ss_pred ceEeeccccccccccC--CccEEE-EEee-------CCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCC-----cccc
Q 015368 267 LVVTLTIHNAQFVFQD--PRKQLW-LFAP-------AYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNS-----EGVG 330 (408)
Q Consensus 267 ~v~~lt~~~~~~~~~~--~~~~~i-~f~~-------~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~-----~~~~ 330 (408)
.+...+.+++...... +.++++ ++.+ |+. |....+.+.+++.++.++ +.|+.+|+++ .. .
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~---~~~~~vd~~~~~~~~d~-~ 81 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG---CVFIYCQVGEKPYWKDP-N 81 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTT---EEEEEEECCCHHHHHCT-T
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCC---cEEEEEECCCchhhhch-h
Confidence 3455566666665554 455555 4555 676 899999999999999877 9999999831 11 4
Q ss_pred cchhhhccCCCCCCcEEEEEccCCccccCCCCCChHHHHHHHHH
Q 015368 331 RRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEE 374 (408)
Q Consensus 331 ~~l~~~~~i~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~ 374 (408)
..+++.|++.. .|.+++++..++...+.+ .+.+.|.+|+++
T Consensus 82 ~~~~~~~~i~~--~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 82 NDFRKNLKVTA--VPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp CHHHHHHCCCS--SSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHHHCCCCe--eCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 57788899954 789988876222222222 567889999874
No 384
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.23 E-value=0.0018 Score=49.89 Aligned_cols=90 Identities=14% Similarity=0.147 Sum_probs=65.6
Q ss_pred CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc--------------------ccccchhhhccC
Q 015368 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE--------------------GVGRRVSQEFGV 339 (408)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~--------------------~~~~~l~~~~~i 339 (408)
.+.+.++ ++..+|. |......+.+++.++. + +.|+.++.++. .-...+.+.||+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i 99 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-E---VTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGV 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-T---SEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-C---eEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCC
Confidence 3445555 4555665 8899999999999998 6 89999997541 113456778888
Q ss_pred CCCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHhc
Q 015368 340 SGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 340 ~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
. ..|.+++++.+|+...+.|..+.+++.++++.+++
T Consensus 100 ~--~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 100 T--QQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp C--SSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC-
T ss_pred C--CCceEEEECCCCCEEEEecCCCHHHHHHHHHHHhc
Confidence 4 36899998875554366788889999999998764
No 385
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.19 E-value=0.0017 Score=50.85 Aligned_cols=92 Identities=10% Similarity=0.121 Sum_probs=68.1
Q ss_pred CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc------------------------ccccchhh
Q 015368 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE------------------------GVGRRVSQ 335 (408)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~------------------------~~~~~l~~ 335 (408)
.+.+.++ ++..+|. |......+.++++++.++ +.|+.++.+.. +-...+.+
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 104 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTD 104 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHH
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHH
Confidence 3445555 4555665 889999999999999988 89999986431 11346778
Q ss_pred hccCCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcC
Q 015368 336 EFGVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 336 ~~~i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
.||+. ..|.+++++.+|+ .+.+.|..+.+++.++|+.++++
T Consensus 105 ~~~v~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 105 AFENE--YVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp HTCCC--CSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred HhCCC--CCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 88984 4689999877444 45567778899999999998875
No 386
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.07 E-value=0.0052 Score=47.19 Aligned_cols=89 Identities=9% Similarity=0.137 Sum_probs=64.7
Q ss_pred CCccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc-------------------ccccchhhhccCC
Q 015368 282 DPRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE-------------------GVGRRVSQEFGVS 340 (408)
Q Consensus 282 ~~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~-------------------~~~~~l~~~~~i~ 340 (408)
.+.+.++. +..+|. |......+.++++++. + +.|+.++.++. +-...+.+.||+.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-A---VTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVP 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-T---SEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-C---cEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCC
Confidence 34455554 445665 8899999999999998 6 89999998651 0024667888884
Q ss_pred CCCCcEEEEEccCCccccCC---CCCChHHHHHHHHHHh
Q 015368 341 GNAPRVIAYSARDAKKYVLN---GELTLSSIKSFGEEFL 376 (408)
Q Consensus 341 ~~~~p~i~i~~~~~~~y~~~---~~~~~~~i~~Fi~~~~ 376 (408)
..|.+++++.+|+.-.+. |..+.+++.+++++++
T Consensus 99 --~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 99 --WQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp --SSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred --CCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 368999987755433556 8889999999999875
No 387
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.01 E-value=0.00091 Score=51.80 Aligned_cols=67 Identities=21% Similarity=0.350 Sum_probs=45.7
Q ss_pred hhHHHHHcCCCcEEEEEec----CCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHH----HHcCCCcCcEEEEEe
Q 015368 64 KNFSEFMGKNRNVMVMFYA----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA----KEYNILAYPTLYLFV 135 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a----~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~----~~~~i~~~Pt~~~~~ 135 (408)
+.++..+..+ .++|+.++ +||++|++....+++. ++.+..+|++.++++. +..|..++|.+ |-
T Consensus 26 ~~v~~~i~~~-~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~V--fI 96 (135)
T 2wci_A 26 EKIQRQIAEN-PILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYANWPTFPQL--WV 96 (135)
T ss_dssp HHHHHHHHHC-SEEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EE
T ss_pred HHHHHHhccC-CEEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHCCCCcCEE--EE
Confidence 3455555544 46665554 8999999988877553 5778888888775543 44588889986 44
Q ss_pred CCeE
Q 015368 136 AGVR 139 (408)
Q Consensus 136 ~g~~ 139 (408)
+|+.
T Consensus 97 ~G~~ 100 (135)
T 2wci_A 97 DGEL 100 (135)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 7753
No 388
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.93 E-value=0.00089 Score=49.57 Aligned_cols=73 Identities=10% Similarity=-0.079 Sum_probs=51.0
Q ss_pred CeEEEEEecCCCCcCHHHHHHHhccCCceeEEEe-------cCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCH
Q 015368 181 SKLVLGFLHDLEGMESEELAAASKLHSDVNFYQT-------TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTR 253 (408)
Q Consensus 181 ~~~vi~f~~~~~~~~~~~~~~~a~~~~~~~f~~~-------~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~ 253 (408)
+..+|.|+++||.++......+.++...+.+..+ .+.+++++|++. ++|++++ .+ . .|.|..+.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~~v~~~~~~~~~~~~~l~~~~~V~---~~PT~~i--~G--~--~~~G~~~~ 83 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGIT---SYPTWII--NG--R--TYTGVRSL 83 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSCEEESCTTCTTSCCCHHHHHTTCC---SSSEEEE--TT--E--EEESCCCH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCCEEEEecccccchhHHHHHHcCCe---EeCEEEE--CC--E--EecCCCCH
Confidence 3457789999999866554444333333333322 356799999999 6999876 22 2 48999999
Q ss_pred HHHHHHHhc
Q 015368 254 LAIANFVTH 262 (408)
Q Consensus 254 ~~i~~fi~~ 262 (408)
++|.+|+..
T Consensus 84 ~~l~~~~~~ 92 (106)
T 3kp8_A 84 EALAVASGY 92 (106)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhCC
Confidence 999999854
No 389
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=96.92 E-value=0.01 Score=46.69 Aligned_cols=97 Identities=14% Similarity=0.117 Sum_probs=68.6
Q ss_pred CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc---------------------cccchhhhcc
Q 015368 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG---------------------VGRRVSQEFG 338 (408)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~---------------------~~~~l~~~~~ 338 (408)
.+.++++ ++..+|. |......+.+++.+++++ ++.++.++.+..+ -...+.+.||
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG--SVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYG 100 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT--TEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhC
Confidence 3445555 5556676 899999999999999643 2999999875211 0234556777
Q ss_pred CCCCCCcEEEEEccCC-ccccCCCCCChHHHHHHHHHHhcCcc
Q 015368 339 VSGNAPRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 339 i~~~~~p~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
......|.+++++.+| ..+.+.|..+.+++.++|+.+.+++-
T Consensus 101 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 101 NTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp CCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC--
T ss_pred CccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHhh
Confidence 3224578888887744 46678899999999999999999865
No 390
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=96.84 E-value=0.01 Score=48.73 Aligned_cols=39 Identities=13% Similarity=0.258 Sum_probs=30.1
Q ss_pred CCCcEEEEEecCCChhHHhhhHHH-HHHHHHhcC--CcEEEE
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEF-AAAAKMLKG--EADLVM 110 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~-~~~~~~~~~--~v~~~~ 110 (408)
..++.++.|+...||+|..+.+.+ ..+.+.|.+ ++.+..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~ 51 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQF 51 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 457889999999999999999998 567777742 455554
No 391
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.88 E-value=0.00017 Score=55.57 Aligned_cols=93 Identities=10% Similarity=0.127 Sum_probs=69.9
Q ss_pred cCCccEEE-EEeeCCC-chHHHHHH---HHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEcc-CC
Q 015368 281 QDPRKQLW-LFAPAYG-SDKVILTF---EEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSAR-DA 354 (408)
Q Consensus 281 ~~~~~~~i-~f~~~~~-~~~~~~~~---~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~-~~ 354 (408)
..+.++++ ++.+||. |......+ .++++.+.++ +.|+.+|++..+ ...+++.|++.. .|.+++++. +|
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~-~~~~~~~~~v~~--~Pt~~~~d~~~G 90 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR---FVVASVSVDTPE-GQELARRYRVPG--TPTFVFLVPKAG 90 (130)
Confidence 34444444 5667776 88888888 8899988888 999999986443 457888999954 688888864 34
Q ss_pred c---cccCCCCCChHHHHHHHHHHhcCc
Q 015368 355 K---KYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 355 ~---~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
+ ...+.|..+.+.+.+||+.++++.
T Consensus 91 ~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 91 AWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 4 345788888999999999988764
No 392
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=96.81 E-value=0.00068 Score=63.85 Aligned_cols=108 Identities=15% Similarity=0.150 Sum_probs=76.1
Q ss_pred ceEeeccccccccccCC--ccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCc-----ceEEEEEEEcCCcccccchhhhc
Q 015368 267 LVVTLTIHNAQFVFQDP--RKQLW-LFAPAYG-SDKVILTFEEVAKALKGKV-----NMLLHVYVEMNSEGVGRRVSQEF 337 (408)
Q Consensus 267 ~v~~lt~~~~~~~~~~~--~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~-----~~i~f~~vd~~~~~~~~~l~~~~ 337 (408)
.+..++.+++..+.... .++++ ++.+|+. |+...+.+.++|+++..+. +.+.|+.+|++.. ..+++.|
T Consensus 24 ~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~---~~la~~y 100 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE---VDLCRKY 100 (470)
T ss_dssp TEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC---HHHHHHT
T ss_pred CcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC---HHHHHHc
Confidence 47889999999887653 35544 5667777 9999999999999997321 1399999999864 5889999
Q ss_pred cCCCCCCcEEEEEccCC--ccccCCCC------------CChHHHHHHHHHHhcCc
Q 015368 338 GVSGNAPRVIAYSARDA--KKYVLNGE------------LTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~--~~y~~~~~------------~~~~~i~~Fi~~~~~gk 379 (408)
++.. .|.+++++.++ ....+.|. ++.+++.+.++.+++.+
T Consensus 101 ~V~~--~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~ 154 (470)
T 3qcp_A 101 DINF--VPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKH 154 (470)
T ss_dssp TCCS--SCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCc--cCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhc
Confidence 9954 68888876522 23345553 45566666666655443
No 393
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.74 E-value=0.011 Score=46.35 Aligned_cols=93 Identities=12% Similarity=0.046 Sum_probs=67.6
Q ss_pred CccEEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc--------------------cccchhhhccCC
Q 015368 283 PRKQLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG--------------------VGRRVSQEFGVS 340 (408)
Q Consensus 283 ~~~~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~--------------------~~~~l~~~~~i~ 340 (408)
+.++++. +..+|. |......+.+++.++.++ ++.|+.++.+... -...+.+.||+.
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGK--DIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN 107 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS--SEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC--CeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC
Confidence 3455554 445666 888999999999999763 2899999877531 012566788884
Q ss_pred CCCCcEEEEEccCC-ccccCCCCCChHHHHHHHHHHhcCc
Q 015368 341 GNAPRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 341 ~~~~p~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
..|.+++++.+| ..+.+.|..+.+++.++|+.+.++.
T Consensus 108 --~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 108 --GIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp --SSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred --CCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 368888888644 4555678888999999999998774
No 394
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=96.71 E-value=0.0095 Score=46.82 Aligned_cols=93 Identities=16% Similarity=0.142 Sum_probs=67.1
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcC-CcceEEEEEEEcCCcc-------------------cccchhhhccCC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKG-KVNMLLHVYVEMNSEG-------------------VGRRVSQEFGVS 340 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~-~~~~i~f~~vd~~~~~-------------------~~~~l~~~~~i~ 340 (408)
+.+.++ ++..+|. |......+.+++.++.+ . +.++.++.+... -...+.+.||+.
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~---v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 102 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQG---VEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVS 102 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT---EEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC---eEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCC
Confidence 345554 4555666 88999999999999975 4 889888875420 023567788885
Q ss_pred CCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCcc
Q 015368 341 GNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 341 ~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
. .|.+++++.+|+ .+.+.|..+.+.+.++|+.++++..
T Consensus 103 ~--~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 103 P--LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp S--SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred C--CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 3 689888877444 4456788899999999999988754
No 395
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.71 E-value=0.0035 Score=49.85 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=65.9
Q ss_pred CccEEEEE--eeCCC-chHHHHHH---HHHHHHhcCCcceEEEEEEEcCCcc--------cccchhhhccCCCCCCcEEE
Q 015368 283 PRKQLWLF--APAYG-SDKVILTF---EEVAKALKGKVNMLLHVYVEMNSEG--------VGRRVSQEFGVSGNAPRVIA 348 (408)
Q Consensus 283 ~~~~~i~f--~~~~~-~~~~~~~~---~~vA~~~~~~~~~i~f~~vd~~~~~--------~~~~l~~~~~i~~~~~p~i~ 348 (408)
+.++++.| .+||. |......+ .+++..+..+ +.++.+|.+... -...+++.|++.. .|.++
T Consensus 47 gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~---~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~--~Pt~~ 121 (154)
T 2ju5_A 47 HKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVH---LHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG--FPELV 121 (154)
T ss_dssp CCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHH---CEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS--SSEEE
T ss_pred CCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCc---EEEEEecCccccCCChhhHhhHHHHHHHcCCCC--CCEEE
Confidence 44666655 47877 88888888 7787766556 999999986531 1236778899954 78999
Q ss_pred EEccCC-ccccCCCCC--ChHHHHHHHHHHhcC
Q 015368 349 YSARDA-KKYVLNGEL--TLSSIKSFGEEFLED 378 (408)
Q Consensus 349 i~~~~~-~~y~~~~~~--~~~~i~~Fi~~~~~g 378 (408)
+++.+| ..+.+ |.. +.+.+.++|+.++..
T Consensus 122 ~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 122 FIDAEGKQLARM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp EECTTCCEEEEE-CCCTTCHHHHHHHHHHHHTC
T ss_pred EEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHhc
Confidence 997744 44556 866 889999999998764
No 396
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.70 E-value=0.0088 Score=40.80 Aligned_cols=69 Identities=13% Similarity=0.045 Sum_probs=51.1
Q ss_pred EEEEecCCCCcCHHH---HHHHh-ccCCceeEEEecCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcC-CHHHHHH
Q 015368 184 VLGFLHDLEGMESEE---LAAAS-KLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQF-TRLAIAN 258 (408)
Q Consensus 184 vi~f~~~~~~~~~~~---~~~~a-~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~-~~~~i~~ 258 (408)
.|.|+.+||.++... +.+++ ++..++.+..+.+.++++++++. +.|++++ + ++.... |.. +.+++.+
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~v~---~~Pt~~~--~--G~~~~~-G~~~~~~~l~~ 74 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQILEAGLT---ALPGLAV--D--GELKIM-GRVASKEEIKK 74 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHTCS---SSSCEEE--T--TEEEEC-SSCCCHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEecCHHHHHHCCCC---cCCEEEE--C--CEEEEc-CCCCCHHHHHH
Confidence 466888999986554 44555 45567888887788999999998 5999997 2 233333 887 8899988
Q ss_pred HH
Q 015368 259 FV 260 (408)
Q Consensus 259 fi 260 (408)
|+
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 86
No 397
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.68 E-value=0.0047 Score=43.65 Aligned_cols=56 Identities=7% Similarity=0.181 Sum_probs=40.5
Q ss_pred EEEEecC----CChhHHhhhHHHHHHHHHhcCCcEEEEEeCc-----ccH----hHHHHcCCC-----cCcEEEEEeCCe
Q 015368 77 MVMFYAN----WCYWSKKLAPEFAAAAKMLKGEADLVMVDAY-----LEK----DLAKEYNIL-----AYPTLYLFVAGV 138 (408)
Q Consensus 77 ~v~f~a~----wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~-----~~~----~~~~~~~i~-----~~Pt~~~~~~g~ 138 (408)
++.|+.+ ||++|++....+++. ++.+-.+|++ .++ ++.+..|.. ++|++++ .+|+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~~g~ 74 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-PDGS 74 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-TTSC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-ECCE
Confidence 4568899 999999988777652 4667777777 553 356677888 8998754 4664
Q ss_pred E
Q 015368 139 R 139 (408)
Q Consensus 139 ~ 139 (408)
.
T Consensus 75 ~ 75 (87)
T 1aba_A 75 H 75 (87)
T ss_dssp E
T ss_pred E
Confidence 3
No 398
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.65 E-value=0.0058 Score=47.49 Aligned_cols=86 Identities=13% Similarity=0.171 Sum_probs=63.4
Q ss_pred CCccEEE-EEeeCCC-chHHHHHHHHHHHHhc-CCcceEEEEEEEcCC-----------------------cccccchhh
Q 015368 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALK-GKVNMLLHVYVEMNS-----------------------EGVGRRVSQ 335 (408)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~-~~~~~i~f~~vd~~~-----------------------~~~~~~l~~ 335 (408)
.+.++++ ++..+|. |......+.++++++. .. +.|+.++.+. .. ...+.+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~---~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~ 108 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDS---VKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDS-KGELMK 108 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSS---EEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECS-SSHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCC---EEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcC-chhHHH
Confidence 3445555 4555665 8899999999999998 45 9999998754 11 346778
Q ss_pred hccCCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHH
Q 015368 336 EFGVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGE 373 (408)
Q Consensus 336 ~~~i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~ 373 (408)
.|++. ..|.+++++.+|+ .+.+.|..+.+++.++|+
T Consensus 109 ~~~v~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 109 EYHII--TIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp HTTCC--EESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred hcCcC--ccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 88884 3689999987554 456788889999998873
No 399
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.64 E-value=0.0079 Score=51.74 Aligned_cols=58 Identities=9% Similarity=0.135 Sum_probs=43.3
Q ss_pred CcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc---HhHHHHcCCCcCcEEEEEeCCeE
Q 015368 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---KDLAKEYNILAYPTLYLFVAGVR 139 (408)
Q Consensus 74 ~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~---~~~~~~~~i~~~Pt~~~~~~g~~ 139 (408)
...++.|+.+||+.|++....+++. ++.+-.+|++.+ .++.+.+|..++|+++ .+|+.
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~--~~g~~ 229 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTVPQVF--IGGKH 229 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEE--ETTEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 4567778999999999998887753 355666777654 3477889999999985 47743
No 400
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.61 E-value=0.016 Score=46.13 Aligned_cols=95 Identities=13% Similarity=0.068 Sum_probs=64.3
Q ss_pred CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc-cccchhhhc---------------------
Q 015368 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG-VGRRVSQEF--------------------- 337 (408)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~-~~~~l~~~~--------------------- 337 (408)
.+.++++ ++..+|. |......+.+++.+++++ ++.|+.++.++.. -...+++.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR--GFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYI 110 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT--TEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC--CeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhh
Confidence 3445555 4555665 889999999999999864 2999999887631 011121222
Q ss_pred --cCCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCcc
Q 015368 338 --GVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 338 --~i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
++ ...|.+++++.+|+ .+.+.|..+.+++.++|++++....
T Consensus 111 ~~~i--~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 111 DGGI--TGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp TTCS--CSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC---
T ss_pred ccCC--CCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 45 34689888887554 4567788899999999999987643
No 401
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=96.60 E-value=0.021 Score=47.68 Aligned_cols=36 Identities=14% Similarity=0.429 Sum_probs=30.5
Q ss_pred HHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHhC
Q 015368 121 KEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKMT 161 (408)
Q Consensus 121 ~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~~ 161 (408)
+++||+|+||+++ +|+ .+.|..+.+.|.+.|.+...
T Consensus 162 ~~~GV~GtPtfvv--ng~---~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI---LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHCCCSSSEEEE--TTE---ECTTCCSHHHHHHHHHHHHT
T ss_pred HHcCCccCCEEEE--CCE---EEeCCCCHHHHHHHHHHHhh
Confidence 6789999999987 784 46899999999999987764
No 402
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.56 E-value=0.0026 Score=55.03 Aligned_cols=80 Identities=9% Similarity=-0.002 Sum_probs=56.0
Q ss_pred CcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc------------------ccHhHHHHcCCCcC--cEEEE
Q 015368 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY------------------LEKDLAKEYNILAY--PTLYL 133 (408)
Q Consensus 74 ~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~------------------~~~~~~~~~~i~~~--Pt~~~ 133 (408)
+..+..|+.++|++|......+.+++.++ ++....+..+ ....+.+++|.+++ |++++
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~--~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I 120 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG--DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL 120 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT--SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC--CeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE
Confidence 36788899999999999999999998765 3532233322 12347788999988 99765
Q ss_pred EeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 134 FVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 134 ~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+|+. +.|..+.+.+.+.|.+..
T Consensus 121 --ng~~---~v~G~d~~~l~~~l~~~~ 142 (270)
T 2axo_A 121 --NGRD---HVKGADVRGIYDRLDAFK 142 (270)
T ss_dssp --TTTE---EEETTCHHHHHHHHHHHH
T ss_pred --CCEE---eecCCCHHHHHHHHHHhh
Confidence 6642 233446788888887654
No 403
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=96.56 E-value=0.0076 Score=48.65 Aligned_cols=75 Identities=8% Similarity=0.030 Sum_probs=55.1
Q ss_pred CCCcEEEEEec-CCChhHHhhhHHHHHHHHHhcC-CcE-EEEEeCcc-----------------------cHhHHHHcCC
Q 015368 72 KNRNVMVMFYA-NWCYWSKKLAPEFAAAAKMLKG-EAD-LVMVDAYL-----------------------EKDLAKEYNI 125 (408)
Q Consensus 72 ~~~~~~v~f~a-~wC~~C~~~~p~~~~~~~~~~~-~v~-~~~v~~~~-----------------------~~~~~~~~~i 125 (408)
.++++++.||- .||+.|..+.+.|.+.+.+++. ++. ++.|.+|. +.++++.||+
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv 120 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGT 120 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCC
Confidence 56777777774 7999999999999999888875 775 87777653 3457788876
Q ss_pred C-----------cCcEEEEEeCCeEeEEeeCC
Q 015368 126 L-----------AYPTLYLFVAGVRQFQFFGE 146 (408)
Q Consensus 126 ~-----------~~Pt~~~~~~g~~~~~~~g~ 146 (408)
. ..-.++++++|++...+..+
T Consensus 121 ~~~~~~~g~g~~~~R~tfvIddG~V~~~~v~~ 152 (171)
T 2xhf_A 121 ELDSSKMLGNNRSRRYAMLIDDNKIRSVSTEP 152 (171)
T ss_dssp BCCCHHHHSSCCBCCEEEEEETTEEEEEEETT
T ss_pred ceeccccCCCcceEEEEEEEeCCEEEEEEEeC
Confidence 4 22456777889776666543
No 404
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.49 E-value=0.0042 Score=46.30 Aligned_cols=64 Identities=17% Similarity=0.383 Sum_probs=43.6
Q ss_pred hHHHHHcCCCcEEEEEec-----CCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhHH----HHcCCCcCcEEEEEe
Q 015368 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDLA----KEYNILAYPTLYLFV 135 (408)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a-----~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~~----~~~~i~~~Pt~~~~~ 135 (408)
.++..+.++ +++ .|.. +||++|++....+++. ++.+..+|++.++++. +..|...+|.+++
T Consensus 8 ~v~~~i~~~-~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi-- 77 (111)
T 3zyw_A 8 RLKKLTHAA-PCM-LFMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYV-- 77 (111)
T ss_dssp HHHHHHTSS-SEE-EEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEE--
T ss_pred HHHHHHhcC-CEE-EEEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEE--
Confidence 344555544 344 4667 9999999998877653 4667778887765543 3347888999844
Q ss_pred CCe
Q 015368 136 AGV 138 (408)
Q Consensus 136 ~g~ 138 (408)
+|+
T Consensus 78 ~g~ 80 (111)
T 3zyw_A 78 SGE 80 (111)
T ss_dssp TTE
T ss_pred CCE
Confidence 774
No 405
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=96.48 E-value=0.015 Score=46.45 Aligned_cols=90 Identities=8% Similarity=0.100 Sum_probs=63.6
Q ss_pred CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcC------------------Ccc-------------
Q 015368 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMN------------------SEG------------- 328 (408)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~------------------~~~------------- 328 (408)
.+++.++ ++..+|. |......+.+++++++ + +.|+.++.+ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~---v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-E---ISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDP 111 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-T---EEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-C---cEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCC
Confidence 3445444 5556776 8999999999999999 6 999999876 210
Q ss_pred -c-----ccchhhhccCCCCCCcEEEEEccCCccccCCCCC-ChHHHHHHHHHHhcC
Q 015368 329 -V-----GRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGEL-TLSSIKSFGEEFLED 378 (408)
Q Consensus 329 -~-----~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~~~~~-~~~~i~~Fi~~~~~g 378 (408)
| ...+.+.|++. ..|.+++++.+|+.-. .|.. +.+++.++|+.++.|
T Consensus 112 ~~~~~~d~~~~~~~~~v~--~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 112 SWIMVMDDGSLVEKFNVR--SIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQGG 165 (165)
T ss_dssp TSEEEECCSHHHHHTTCC--SSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC---
T ss_pred CeeEEeChHHHHHHhCCC--CceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHhcC
Confidence 0 02566777874 3689888887555444 6767 899999999998876
No 406
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.46 E-value=0.0077 Score=44.67 Aligned_cols=65 Identities=17% Similarity=0.324 Sum_probs=43.2
Q ss_pred hHHHHHcCCCcEEEEEec-----CCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccHhH----HHHcCCCcCcEEEEEe
Q 015368 65 NFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEKDL----AKEYNILAYPTLYLFV 135 (408)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a-----~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~----~~~~~i~~~Pt~~~~~ 135 (408)
.+++.+.++ .++| |.. |||++|++....+.+. ++.+-.+|++++++. .+..|...+|+++ -
T Consensus 10 ~v~~~i~~~-~Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~if--i 79 (109)
T 3ipz_A 10 TLEKLVNSE-KVVL-FMKGTRDFPMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSNWPTFPQLY--I 79 (109)
T ss_dssp HHHHHHTSS-SEEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEE--E
T ss_pred HHHHHHccC-CEEE-EEecCCCCCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeEE--E
Confidence 345566555 4444 444 5999999988877763 466777888776544 3445888999764 4
Q ss_pred CCeE
Q 015368 136 AGVR 139 (408)
Q Consensus 136 ~g~~ 139 (408)
+|+.
T Consensus 80 ~g~~ 83 (109)
T 3ipz_A 80 GGEF 83 (109)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 7743
No 407
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=96.39 E-value=0.0061 Score=48.68 Aligned_cols=83 Identities=8% Similarity=0.137 Sum_probs=57.8
Q ss_pred cCCeEEEEEecCCCCcCHHHHH---HHh-ccC-C----------------------------c---eeEEEecCHhHHhh
Q 015368 179 VESKLVLGFLHDLEGMESEELA---AAS-KLH-S----------------------------D---VNFYQTTSADVAEF 222 (408)
Q Consensus 179 ~~~~~vi~f~~~~~~~~~~~~~---~~a-~~~-~----------------------------~---~~f~~~~~~~l~~~ 222 (408)
.++.++|.|+.+||.++..... .++ ++. . . +.+....+..+++.
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 4567888899999988554433 333 210 1 1 22333455678999
Q ss_pred cCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCC
Q 015368 223 FHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTK 264 (408)
Q Consensus 223 ~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 264 (408)
|++. +.|+++++..++.....+.|..+.+++.++|+...
T Consensus 117 ~~v~---~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 117 LNIS---VYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TTCC---SSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred cCCC---ccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 9998 58999999766555566778889999999998654
No 408
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.36 E-value=0.0083 Score=42.97 Aligned_cols=55 Identities=5% Similarity=0.012 Sum_probs=38.7
Q ss_pred EEEEecCCChhH------HhhhHHHHHHHHHhcCCcEEEEEeCcccHh----HHHHcC--CCcCcEEEEEeCCeE
Q 015368 77 MVMFYANWCYWS------KKLAPEFAAAAKMLKGEADLVMVDAYLEKD----LAKEYN--ILAYPTLYLFVAGVR 139 (408)
Q Consensus 77 ~v~f~a~wC~~C------~~~~p~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~~--i~~~Pt~~~~~~g~~ 139 (408)
++.|+.+||+.| ++....+++ . ++.+..+|++.+++ +.+..| ...+|+++ -+|+.
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~----~--~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~if--i~g~~ 70 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG----K--RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIV--NGNHY 70 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T--TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEE--ETTEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH----C--CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEE--ECCEE
Confidence 566899999999 666555443 2 57788888887643 445677 77999874 46743
No 409
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.29 E-value=0.0096 Score=44.29 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=38.7
Q ss_pred EEEEEecCCChhHH------hhhHHHHHHHHHhcCCcEEEEEeCcccHhH----HHHc--------CCCcCcEEEEEeCC
Q 015368 76 VMVMFYANWCYWSK------KLAPEFAAAAKMLKGEADLVMVDAYLEKDL----AKEY--------NILAYPTLYLFVAG 137 (408)
Q Consensus 76 ~~v~f~a~wC~~C~------~~~p~~~~~~~~~~~~v~~~~v~~~~~~~~----~~~~--------~i~~~Pt~~~~~~g 137 (408)
-++.|+.+||+.|+ +....+++ . ++.+..+|++.+++. .+.+ |...+|+++ -+|
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~----~--gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf--i~g 80 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA----N--KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF--NGD 80 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH----T--TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE--ETT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH----c--CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE--ECC
Confidence 46678899999999 55554443 2 588889999877543 3444 677789874 467
Q ss_pred eE
Q 015368 138 VR 139 (408)
Q Consensus 138 ~~ 139 (408)
+.
T Consensus 81 ~~ 82 (111)
T 2ct6_A 81 RY 82 (111)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 410
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.019 Score=43.35 Aligned_cols=66 Identities=14% Similarity=0.192 Sum_probs=43.5
Q ss_pred hHHHHHcCCCcEEEEEec----CCChhHHhhhHHHHHHHHHhcCCcE---EEEEeCcccHhH----HHHcCCCcCcEEEE
Q 015368 65 NFSEFMGKNRNVMVMFYA----NWCYWSKKLAPEFAAAAKMLKGEAD---LVMVDAYLEKDL----AKEYNILAYPTLYL 133 (408)
Q Consensus 65 ~~~~~~~~~~~~~v~f~a----~wC~~C~~~~p~~~~~~~~~~~~v~---~~~v~~~~~~~~----~~~~~i~~~Pt~~~ 133 (408)
.++.++.+++ ++|+-.. |||++|++....+.+. ++. +..+|++.++++ .+..|...+|.++
T Consensus 8 ~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vf- 79 (121)
T 3gx8_A 8 AIEDAIESAP-VVLFMKGTPEFPKCGFSRATIGLLGNQ------GVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLY- 79 (121)
T ss_dssp HHHHHHHSCS-EEEEESBCSSSBCTTHHHHHHHHHHHH------TBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEE-
T ss_pred HHHHHhccCC-EEEEEeccCCCCCCccHHHHHHHHHHc------CCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEE-
Confidence 3455666554 4443333 5999999998888764 344 777888776554 3445788899974
Q ss_pred EeCCeE
Q 015368 134 FVAGVR 139 (408)
Q Consensus 134 ~~~g~~ 139 (408)
-+|+.
T Consensus 80 -I~g~~ 84 (121)
T 3gx8_A 80 -VNKEF 84 (121)
T ss_dssp -ETTEE
T ss_pred -ECCEE
Confidence 37743
No 411
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=96.22 E-value=0.028 Score=44.10 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=66.7
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc--------------------ccccchhhhccCC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE--------------------GVGRRVSQEFGVS 340 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~--------------------~~~~~l~~~~~i~ 340 (408)
+.+.++ ++..+|. |......+.+++.++.++ ++.++.++.+.. +-...+.+.||+.
T Consensus 28 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 105 (153)
T 2l5o_A 28 GKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK--NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQ 105 (153)
T ss_dssp TCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT--TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCC
Confidence 345444 4556666 889999999999999853 277777663210 0134677888885
Q ss_pred CCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCcc
Q 015368 341 GNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 341 ~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
. .|.+++++.+|+ .+.+.|..+.+.+.++|+.++.+.-
T Consensus 106 ~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~ 144 (153)
T 2l5o_A 106 V--YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSD 144 (153)
T ss_dssp S--SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred c--cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhh
Confidence 3 688888877444 4457788899999999999998754
No 412
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.21 E-value=0.0091 Score=48.25 Aligned_cols=82 Identities=11% Similarity=0.022 Sum_probs=56.0
Q ss_pred ccCCeEEEEEecCCCCcCHHHH------HHHhc-cCCceeEEEec---CHhH--------------------------Hh
Q 015368 178 TVESKLVLGFLHDLEGMESEEL------AAASK-LHSDVNFYQTT---SADV--------------------------AE 221 (408)
Q Consensus 178 ~~~~~~vi~f~~~~~~~~~~~~------~~~a~-~~~~~~f~~~~---~~~l--------------------------~~ 221 (408)
..+++++|.|+.+||.++...- ..+.+ +..++.+..+. ..++ .+
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRV 124 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHHHH
Confidence 4578899999999999875531 22222 22245554432 1112 67
Q ss_pred hcCCCCCCCCCeEEEeecCCCcccccCCcCC-HHHHHHHHhc
Q 015368 222 FFHIHPKSKRPALIFLHLEAGKATPFRHQFT-RLAIANFVTH 262 (408)
Q Consensus 222 ~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~-~~~i~~fi~~ 262 (408)
.|++. ++|+++++...+.....+.|..+ .+++.+||++
T Consensus 125 ~~~v~---~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 125 KFGAN---AQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp HHSCC---CSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred HcCCC---CcceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 89998 69999999766555666778888 8999999865
No 413
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=96.13 E-value=0.011 Score=46.69 Aligned_cols=89 Identities=11% Similarity=0.035 Sum_probs=65.3
Q ss_pred ccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcC--Cc----------------------ccccchhhhc
Q 015368 284 RKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMN--SE----------------------GVGRRVSQEF 337 (408)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~--~~----------------------~~~~~l~~~~ 337 (408)
.+.++ ++..+|. |......+.++++++ . +.++.++.+ +. .-...+.+.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~---v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--G---VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--C---CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--C---CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHh
Confidence 34444 5556666 889999999999999 5 788888871 10 0134677888
Q ss_pred cCCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCc
Q 015368 338 GVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
|+. ..|.+++++.+|+ .+.+.|..+.+++.++|++...+.
T Consensus 106 ~v~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 106 KVL--GQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SBC--SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred CCC--cccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 885 4689888877554 455778889999999999988764
No 414
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=96.06 E-value=0.03 Score=45.61 Aligned_cols=94 Identities=5% Similarity=0.073 Sum_probs=62.8
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceE------EEEEEEcCC-c-ccccchhhhccC-------------
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNML------LHVYVEMNS-E-GVGRRVSQEFGV------------- 339 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i------~f~~vd~~~-~-~~~~~l~~~~~i------------- 339 (408)
++++++ ++..+|. |......+.+++++++++. + .|+.++.+. . +-...+++.+++
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAG--NGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC-----CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcC--CCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 445544 4556665 8889999999999987531 5 899998876 2 212233333333
Q ss_pred ------CCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcC
Q 015368 340 ------SGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 340 ------~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
.....|.+++++.+|+ .+.+.|..+.++|.++|+.+++.
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred HHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 1234687788777444 45677888999999999998753
No 415
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=96.06 E-value=0.055 Score=41.11 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=62.5
Q ss_pred CccEEEEE-eeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc-------------------------ccccchhh
Q 015368 283 PRKQLWLF-APAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE-------------------------GVGRRVSQ 335 (408)
Q Consensus 283 ~~~~~i~f-~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~-------------------------~~~~~l~~ 335 (408)
+.++++.| ..+|. |......+.++++++.+. +.++.++.... .-...+.+
T Consensus 22 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (138)
T 4evm_A 22 GKKVYLKFWASWCSICLASLPDTDEIAKEAGDD---YVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLE 98 (138)
T ss_dssp TSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTT---EEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHH
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCC---cEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHH
Confidence 44555544 45565 889999999999998777 99998853210 00235677
Q ss_pred hccCCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHH
Q 015368 336 EFGVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEF 375 (408)
Q Consensus 336 ~~~i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~ 375 (408)
.||+. ..|.+++++.+|+ .+.+.|..+.+++.++|+.+
T Consensus 99 ~~~v~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 99 TYGVR--SYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCC--SSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HcCcc--cCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 88884 3689999887444 45677888999999998864
No 416
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.99 E-value=0.0084 Score=44.82 Aligned_cols=80 Identities=5% Similarity=-0.108 Sum_probs=55.2
Q ss_pred cCCeEEEEEecCCCCcCHHHHHHHh-ccCCc-----eeEEE--ecC---HhHHhhcCCCCCCCCCeEEEeecCCCccccc
Q 015368 179 VESKLVLGFLHDLEGMESEELAAAS-KLHSD-----VNFYQ--TTS---ADVAEFFHIHPKSKRPALIFLHLEAGKATPF 247 (408)
Q Consensus 179 ~~~~~vi~f~~~~~~~~~~~~~~~a-~~~~~-----~~f~~--~~~---~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y 247 (408)
+....+|.|+++||.++...-..++ .+... +.+.. ++. ..++..+++. +.|++++|+.+ ......
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~---g~PT~i~f~~G-~ev~Ri 92 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVT---FTPTFVLMAGD-VESGRL 92 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCC---SSSEEEEEETT-EEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCC---CCCEEEEEECC-EEEeee
Confidence 3457888999999998766544444 22221 33433 222 3577888888 58999999944 455678
Q ss_pred CCcCCHHHHHHHHhc
Q 015368 248 RHQFTRLAIANFVTH 262 (408)
Q Consensus 248 ~g~~~~~~i~~fi~~ 262 (408)
.|-...+.+..|++.
T Consensus 93 ~G~~~~~~f~~~L~~ 107 (116)
T 3dml_A 93 EGYPGEDFFWPMLAR 107 (116)
T ss_dssp ECCCCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHH
Confidence 899999999999875
No 417
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.94 E-value=0.0063 Score=48.90 Aligned_cols=93 Identities=13% Similarity=0.081 Sum_probs=63.4
Q ss_pred cCCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCc-cc
Q 015368 281 QDPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAK-KY 357 (408)
Q Consensus 281 ~~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~-~y 357 (408)
..+.++++ ++.+||. |....+.|.+++..+... +.|+.+|++... ..+...+++.....|.+++++.+|+ ..
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~--~~~~~~~~~~~~~~Pt~~~~d~~G~~~~ 118 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEE--EPKDEDFSPDGGYIPRILFLDPSGKVHP 118 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGG--SCSCGGGCTTCSCSSEEEEECTTSCBCT
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCc--hHHHHHhcccCCcCCeEEEECCCCCEEE
Confidence 34445544 5566776 889999999987766544 567777766542 1256778886556899999976443 33
Q ss_pred cCCC----------CCChHHHHHHHHHHhcC
Q 015368 358 VLNG----------ELTLSSIKSFGEEFLED 378 (408)
Q Consensus 358 ~~~~----------~~~~~~i~~Fi~~~~~g 378 (408)
.+.| ..+.+++.++|+.+++.
T Consensus 119 ~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 119 EIINENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp TCCCTTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred EEeCCCCccchhcccCCHHHHHHHHHHHHHh
Confidence 3555 27789999999988764
No 418
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=95.89 E-value=0.013 Score=48.30 Aligned_cols=42 Identities=7% Similarity=0.150 Sum_probs=36.1
Q ss_pred CCcEEEEEecCCChhHHhhhHHH-HHHHHHhcCCcEEEEEeCc
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEF-AAAAKMLKGEADLVMVDAY 114 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~-~~~~~~~~~~v~~~~v~~~ 114 (408)
.++++|.||..+||+|..+.+.+ .++.+.+.+++.+..+...
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 56789999999999999999999 9999988777777777654
No 419
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=95.85 E-value=0.1 Score=40.30 Aligned_cols=89 Identities=10% Similarity=0.089 Sum_probs=62.3
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHh-cCCcceEEEEEEEcCCcc----------------------cccchhhhc
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKAL-KGKVNMLLHVYVEMNSEG----------------------VGRRVSQEF 337 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~-~~~~~~i~f~~vd~~~~~----------------------~~~~l~~~~ 337 (408)
+.++++ ++..+|. |......+.++++++ .++ ++.++.++.+... ....+++.|
T Consensus 33 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 33 NRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK--NFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT--TEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC--CeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 345444 5556766 999999999999999 543 2888888876531 023677889
Q ss_pred cCCCCCCcEEEEEccCCcc-ccCCCCCChHHHHHHHHHHhcC
Q 015368 338 GVSGNAPRVIAYSARDAKK-YVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~~~-y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
|+. ..|.+++++.+|+. +... +.+.+.++++.+++.
T Consensus 111 ~v~--~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 111 AIL--TLPTNILLSPTGKILARDI---QGEALTGKLKELLKT 147 (148)
T ss_dssp TCC--SSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC--
T ss_pred CCC--CcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHcc
Confidence 985 46898888775543 3332 789999999988754
No 420
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.85 E-value=0.11 Score=43.40 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=34.7
Q ss_pred HHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 120 AKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 120 ~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++++||.|+||+++.++|+......|..+.+.+.+.|++.+
T Consensus 162 a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 162 AKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 46789999999999888877777788889999998888765
No 421
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=95.83 E-value=0.016 Score=43.55 Aligned_cols=66 Identities=17% Similarity=0.285 Sum_probs=43.2
Q ss_pred hhHHHHHcCCCcEEEEEec-----CCChhHHhhhHHHHHHHHHhcCCcE-EEEEeCcccHhHH----HHcCCCcCcEEEE
Q 015368 64 KNFSEFMGKNRNVMVMFYA-----NWCYWSKKLAPEFAAAAKMLKGEAD-LVMVDAYLEKDLA----KEYNILAYPTLYL 133 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a-----~wC~~C~~~~p~~~~~~~~~~~~v~-~~~v~~~~~~~~~----~~~~i~~~Pt~~~ 133 (408)
+.+++++.++ +++| |.. |||++|++....+++. ++. +..+|+++++++. +..|...+|+++
T Consensus 11 ~~v~~~i~~~-~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vf- 81 (118)
T 2wem_A 11 EQLDALVKKD-KVVV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVY- 81 (118)
T ss_dssp HHHHHHHHHS-SEEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEE-
T ss_pred HHHHHHhccC-CEEE-EEecCCCCCccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEE-
Confidence 3455666555 3444 445 4999999988777653 463 7777877765543 334788899974
Q ss_pred EeCCeE
Q 015368 134 FVAGVR 139 (408)
Q Consensus 134 ~~~g~~ 139 (408)
-+|+.
T Consensus 82 -I~g~~ 86 (118)
T 2wem_A 82 -LNGEF 86 (118)
T ss_dssp -ETTEE
T ss_pred -ECCEE
Confidence 47743
No 422
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.71 E-value=0.09 Score=41.00 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=63.6
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc--c-----------------ccchhhhccCCC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG--V-----------------GRRVSQEFGVSG 341 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~--~-----------------~~~l~~~~~i~~ 341 (408)
+.++++ ++..+|. |......+.+++.++.++ ++.++.++.+... . ...+.+.||+.
T Consensus 28 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~- 104 (152)
T 3gl3_A 28 GSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK--GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVK- 104 (152)
T ss_dssp TSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCC-
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC--CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCC-
Confidence 345554 5556676 889999999999999864 2888888876431 0 11456778884
Q ss_pred CCCcEEEEEccCCc-cccCCC--CCChHHHHHHHHHHhcCc
Q 015368 342 NAPRVIAYSARDAK-KYVLNG--ELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 342 ~~~p~i~i~~~~~~-~y~~~~--~~~~~~i~~Fi~~~~~gk 379 (408)
..|.+++++.+|+ .+.+.| ..+.+++.++|++.+.+.
T Consensus 105 -~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 105 -GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp -SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred -CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 3688888877444 344555 346689999999998874
No 423
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=95.68 E-value=0.1 Score=40.74 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=64.3
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc--c--------------------ccchhhhcc
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG--V--------------------GRRVSQEFG 338 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~--~--------------------~~~l~~~~~ 338 (408)
+.++++ ++..+|. |......+.+++.++.++ ++.++.++.+... + ...+.+.||
T Consensus 29 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 29 GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK--GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT--TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 345444 5556666 899999999999999863 2889998877521 0 246778888
Q ss_pred CCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCcc
Q 015368 339 VSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 339 i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
+. ..|.+++++.+|+ .+.+ .+.+++.++|+.++++..
T Consensus 107 v~--~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~~~~ 144 (152)
T 2lrn_A 107 IV--GFPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVNGAK 144 (152)
T ss_dssp CC--SSCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHTSSS
T ss_pred CC--cCCeEEEECCCCeEEEee---CCHHHHHHHHHHHHhhcc
Confidence 85 3688888877544 3332 356899999999988754
No 424
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=95.58 E-value=0.058 Score=42.22 Aligned_cols=93 Identities=14% Similarity=0.182 Sum_probs=62.4
Q ss_pred CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcC-CcceEEEEEEEcCCcc--------------------cccchhhhcc
Q 015368 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKG-KVNMLLHVYVEMNSEG--------------------VGRRVSQEFG 338 (408)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~-~~~~i~f~~vd~~~~~--------------------~~~~l~~~~~ 338 (408)
.+.++++ ++..+|. |......+.+++.++.+ . +.++.++.+... -...+.+.||
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~---~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKP---FRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYG 103 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSS---EEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC---eEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhC
Confidence 3445555 4555665 88999999999999987 4 889988877530 0123667888
Q ss_pred CCCCCCcEEEEEccCCc-cccCCCC--CChHHHHHHHHHHhcCc
Q 015368 339 VSGNAPRVIAYSARDAK-KYVLNGE--LTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 339 i~~~~~p~i~i~~~~~~-~y~~~~~--~~~~~i~~Fi~~~~~gk 379 (408)
+. ..|.+++++.+|+ .+.+.|. .+.+++.++|+.+..+.
T Consensus 104 v~--~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 104 TT--GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp CC--SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC----
T ss_pred CC--CCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHh
Confidence 84 3688888877554 3445553 46789999999887663
No 425
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=95.38 E-value=0.075 Score=41.89 Aligned_cols=92 Identities=9% Similarity=0.095 Sum_probs=64.8
Q ss_pred CccEEE-EEeeCCC-chH-HHHHHHHHHHHhcCCcceEEEEEEEcCC-------------------------cccccc--
Q 015368 283 PRKQLW-LFAPAYG-SDK-VILTFEEVAKALKGKVNMLLHVYVEMNS-------------------------EGVGRR-- 332 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~-~~~~~~~vA~~~~~~~~~i~f~~vd~~~-------------------------~~~~~~-- 332 (408)
++++++ ++..+|. |.. ....+.+++++++++ ++.++.++.+. .+-...
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES--QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQ 107 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTC
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC--CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccc
Confidence 445555 4556666 777 589999999999864 28888887520 000112
Q ss_pred ----hhhhccCCCCCCcEEEEEccCC-ccccCCCCCChHHHHHHHHHHhcC
Q 015368 333 ----VSQEFGVSGNAPRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 333 ----l~~~~~i~~~~~p~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
+.+.||+.. .|.+++++.+| ..+.+.|..+.+.+.++|+.+++.
T Consensus 108 ~~~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 108 RIPSTMKKYRLEG--TPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SSCHHHHHTTCCS--SSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hhhhHHHhcccCc--cceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 677888843 68888888744 455567888999999999999875
No 426
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.24 E-value=0.11 Score=42.19 Aligned_cols=95 Identities=9% Similarity=0.034 Sum_probs=63.3
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhc-CCcceEEEEEEEcCCc--ccccchhhhccCCC----------------
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALK-GKVNMLLHVYVEMNSE--GVGRRVSQEFGVSG---------------- 341 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~-~~~~~i~f~~vd~~~~--~~~~~l~~~~~i~~---------------- 341 (408)
++++++ ++..+|. |......++++++++. .. +.++.++.+.. +-...+++.++++.
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~---~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 136 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPN---FEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLK 136 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTT---EEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHH
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCC---cEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhc
Confidence 345444 4555665 8889999999999998 45 88888887653 11234556666631
Q ss_pred -----CCCcEEEEEccCCc-cccCCCCC--ChHHHHHHHHHHhcCcc
Q 015368 342 -----NAPRVIAYSARDAK-KYVLNGEL--TLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 342 -----~~~p~i~i~~~~~~-~y~~~~~~--~~~~i~~Fi~~~~~gk~ 380 (408)
...|.+++++.+|+ .+.+.|.. +.+++.++|+.++.++.
T Consensus 137 ~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~a 183 (186)
T 1jfu_A 137 AIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKAA 183 (186)
T ss_dssp TTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC---
T ss_pred cccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcccc
Confidence 14788888887544 44566644 47899999999988753
No 427
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=95.19 E-value=0.062 Score=42.32 Aligned_cols=92 Identities=9% Similarity=0.005 Sum_probs=65.0
Q ss_pred CccEEE-EEeeCCC-chHH-HHHHHHHHHHhcCCcceEEEEEEEcCCc-------------------------cccc---
Q 015368 283 PRKQLW-LFAPAYG-SDKV-ILTFEEVAKALKGKVNMLLHVYVEMNSE-------------------------GVGR--- 331 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~-~~~~~~vA~~~~~~~~~i~f~~vd~~~~-------------------------~~~~--- 331 (408)
++++++ ++..||. |... ...+.+++++++++ ++.|+.++.+.. +-..
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~--~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED--KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT--TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC--CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 445555 5556676 8885 89999999999843 288888875310 0011
Q ss_pred --chhhhccCCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcC
Q 015368 332 --RVSQEFGVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 332 --~l~~~~~i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
.+.+.||+. ..|.+++++.+|+ .+.+.|..+.+++.++|+.+++.
T Consensus 106 ~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 106 MPRTMAAYQMR--GTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SCHHHHHTTCC--SSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHcCCC--CCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 367788884 3688888887554 45567888999999999999875
No 428
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.16 E-value=0.043 Score=43.07 Aligned_cols=80 Identities=6% Similarity=-0.023 Sum_probs=54.5
Q ss_pred CCeEEEEEecCCCCcCHHHHHHHhccC--CceeEEEec--------------------------CHhHHhhcCCCCCCCC
Q 015368 180 ESKLVLGFLHDLEGMESEELAAASKLH--SDVNFYQTT--------------------------SADVAEFFHIHPKSKR 231 (408)
Q Consensus 180 ~~~~vi~f~~~~~~~~~~~~~~~a~~~--~~~~f~~~~--------------------------~~~l~~~~~i~~~~~~ 231 (408)
++++++.|+.+||.++......+.++. +++.+..+. +..+++.|++. +.
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~---~~ 118 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY---GV 118 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTCTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC---SS
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC---cc
Confidence 567888899999998655544433221 446554432 34677888988 58
Q ss_pred CeEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 232 PALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 232 p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
|+.+++..++.....+.|..+.+++.++|+.
T Consensus 119 P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 119 PETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp CEEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred CeEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 9888786655445567788888888888764
No 429
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=95.11 E-value=0.47 Score=33.97 Aligned_cols=82 Identities=11% Similarity=0.196 Sum_probs=69.6
Q ss_pred EEEEEecCCChhHHhhhHHHHHHHHHhc-C-CcEEEEEeCcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHH
Q 015368 76 VMVMFYANWCYWSKKLAPEFAAAAKMLK-G-EADLVMVDAYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVIS 153 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~p~~~~~~~~~~-~-~v~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 153 (408)
...+|.|..-+.+++....+.++-+.+. + .+.+-.||+.+++++++.++|-.+||++=.... ...+..|..-.+++.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~-P~rriiGd~i~~ql~ 91 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPALVKIGPG-SRQVLSGIDLTDQLA 91 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESS-SCEEEESSCHHHHHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeeeccHhhccCCC-CceEEeChHHHHHHH
Confidence 4546778888999999999988766654 3 899999999999999999999999999887765 678899998899999
Q ss_pred HHHHh
Q 015368 154 AWVRE 158 (408)
Q Consensus 154 ~~i~~ 158 (408)
.|.-+
T Consensus 92 ~wwpr 96 (105)
T 1t4y_A 92 NQLPQ 96 (105)
T ss_dssp HHHHH
T ss_pred HHhHH
Confidence 98754
No 430
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=94.95 E-value=0.11 Score=40.15 Aligned_cols=85 Identities=7% Similarity=0.083 Sum_probs=56.3
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccc-----------------------cchhhhc
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVG-----------------------RRVSQEF 337 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~-----------------------~~l~~~~ 337 (408)
+.++++ ++..+|. |......+.+++++++++ ++.|+.++.+... . ..+.+.|
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~v~v~~d~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 107 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK--GIQVYAANIERKD-EEWLKFIRSKKIGGWLNVRDSKNHTDFKITY 107 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG--TEEEEEEECCSSS-HHHHHHHHHHTCTTSEEEECTTCCCCHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccC--CEEEEEEEecCCH-HHHHHHHHHcCCCCceEEeccccchhHHHhc
Confidence 345444 5556665 889999999999999863 2899999887532 0 0167788
Q ss_pred cCCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHH
Q 015368 338 GVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEF 375 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~ 375 (408)
|+. ..|.+++++.+|+ .+.+.|. .++.++++.+
T Consensus 108 ~i~--~~P~~~lid~~G~i~~~~~g~---~~~~~~l~~l 141 (148)
T 3hcz_A 108 DIY--ATPVLYVLDKNKVIIAKRIGY---ENLDDFLVQY 141 (148)
T ss_dssp CCC--SSCEEEEECTTCBEEEESCCG---GGHHHHHHHH
T ss_pred CcC--CCCEEEEECCCCcEEEecCCH---HHHHHHHHHH
Confidence 884 3689999887444 4445554 4455555444
No 431
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=94.87 E-value=0.069 Score=43.86 Aligned_cols=91 Identities=16% Similarity=0.138 Sum_probs=63.8
Q ss_pred EEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc--------------------------ccccchhhhc
Q 015368 286 QLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE--------------------------GVGRRVSQEF 337 (408)
Q Consensus 286 ~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~--------------------------~~~~~l~~~~ 337 (408)
+++. +..+|. |......+.+++.++.++ ++.++.++.+.. +-...+.+.|
T Consensus 49 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 49 TVIMFICNHCPFVKHVQHELVRLANDYMPK--GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHGGG--TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 5554 445565 888899999999999753 288888887421 0023566777
Q ss_pred cCCCCCCcEEEEEccCCc-ccc---------CCCCCChHHHHHHHHHHhcCcc
Q 015368 338 GVSGNAPRVIAYSARDAK-KYV---------LNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~~-~y~---------~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
|+. ..|.+++++.+|+ .+. +.|..+.++|.+.|+.+++++-
T Consensus 127 ~v~--~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 127 DAA--CTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp TCC--EESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred CCC--CCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 774 3588888877443 333 4577789999999999998865
No 432
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=94.66 E-value=0.05 Score=39.93 Aligned_cols=74 Identities=8% Similarity=0.042 Sum_probs=54.7
Q ss_pred EEEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccCCccccCCCCCC
Q 015368 286 QLWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELT 364 (408)
Q Consensus 286 ~~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~~~~~~ 364 (408)
++++..+++. |+.....+.+++.++. +.|..+|.+++ +.+...||+. .|.++++.. ++.. ..|.++
T Consensus 32 vv~y~~~~C~~C~~a~~~L~~l~~e~~-----i~~~~vDId~d---~~l~~~ygv~---VP~l~~~~d-G~~v-~~g~~~ 98 (107)
T 2fgx_A 32 LVVYGREGCHLCEEMIASLRVLQKKSW-----FELEVINIDGN---EHLTRLYNDR---VPVLFAVNE-DKEL-CHYFLD 98 (107)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHSC-----CCCEEEETTTC---HHHHHHSTTS---CSEEEETTT-TEEE-ECSSCC
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHhcC-----CeEEEEECCCC---HHHHHHhCCC---CceEEEEEC-CEEE-EecCCC
Confidence 4445556776 9999999999998874 77889998764 4677889983 788876643 3332 357788
Q ss_pred hHHHHHHH
Q 015368 365 LSSIKSFG 372 (408)
Q Consensus 365 ~~~i~~Fi 372 (408)
.+.|.+||
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999987
No 433
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=94.57 E-value=0.055 Score=42.58 Aligned_cols=75 Identities=5% Similarity=-0.071 Sum_probs=45.9
Q ss_pred HHHHhccCCeEEEEEecCCCCcCHHHHHHH------hccC-CceeEEEe--cCHhHHhhcCCCCCCCCCeEEEeecCCCc
Q 015368 173 AERILTVESKLVLGFLHDLEGMESEELAAA------SKLH-SDVNFYQT--TSADVAEFFHIHPKSKRPALIFLHLEAGK 243 (408)
Q Consensus 173 ~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~------a~~~-~~~~f~~~--~~~~l~~~~~i~~~~~~p~l~~~~~~~~~ 243 (408)
+......+++++|.|+++||.++...-... ..+. .++....+ ...++...+++. +.|++++++.++..
T Consensus 37 l~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~---~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 37 LFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQ---YVPRIMFVDPSLTV 113 (151)
T ss_dssp HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCC---CSSEEEEECTTSCB
T ss_pred HHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCC---CCCEEEEECCCCCE
Confidence 444556788999999999999855432211 1111 12333333 223466778887 69999999865544
Q ss_pred ccccCCc
Q 015368 244 ATPFRHQ 250 (408)
Q Consensus 244 ~~~y~g~ 250 (408)
.....|.
T Consensus 114 v~~~~G~ 120 (151)
T 3ph9_A 114 RADIAGR 120 (151)
T ss_dssp CTTCCCS
T ss_pred EEEEeCC
Confidence 4555565
No 434
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=94.45 E-value=0.14 Score=41.69 Aligned_cols=93 Identities=11% Similarity=0.079 Sum_probs=63.9
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc--------------------------ccccchh
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE--------------------------GVGRRVS 334 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~--------------------------~~~~~l~ 334 (408)
++++++ ++..+|. |......+++++.++.++ +.++.++.+.. +-...+.
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 109 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVA 109 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHH
Confidence 345444 4555665 778888999999999987 89999887421 0023566
Q ss_pred hhccCCCCCCcEEEEEccCCc-ccc--------CCCCCChHHHHHHHHHHhcCcc
Q 015368 335 QEFGVSGNAPRVIAYSARDAK-KYV--------LNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 335 ~~~~i~~~~~p~i~i~~~~~~-~y~--------~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
+.||+. ..|.+++++.+|+ .+. +.+..+.++|.+.|+.+++++-
T Consensus 110 ~~~~v~--~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 110 KAYRAL--RTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp HHTTCC--EESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred HHcCCC--CCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 777774 3688888877444 332 1123468899999999998865
No 435
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=94.29 E-value=0.24 Score=38.95 Aligned_cols=87 Identities=14% Similarity=0.179 Sum_probs=57.0
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc----------------ccccchhhhccCCCCCC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE----------------GVGRRVSQEFGVSGNAP 344 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~----------------~~~~~l~~~~~i~~~~~ 344 (408)
+.++++ ++..+|. |......+.+++.++... ++.|+.++.+.. +-...+.+.||+. ..
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~ 116 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG--DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGAN--RL 116 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT--SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCC--SS
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC--CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCC--Cc
Confidence 445555 4555665 889999999999999842 299999998751 0023667888885 36
Q ss_pred cEEEEEccCCc-cccCCC--CCChHHHHHHHH
Q 015368 345 RVIAYSARDAK-KYVLNG--ELTLSSIKSFGE 373 (408)
Q Consensus 345 p~i~i~~~~~~-~y~~~~--~~~~~~i~~Fi~ 373 (408)
|.+++++.+|+ .+.+.| ..+..++.+.+.
T Consensus 117 P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 117 PDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp SEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred ceEEEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 88888877444 445555 344455555444
No 436
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=94.26 E-value=0.078 Score=44.42 Aligned_cols=45 Identities=13% Similarity=0.170 Sum_probs=38.6
Q ss_pred cHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 116 EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 116 ~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
+...++++||.|+||++++.+|+....+.|..+.+.+.+.|.+.+
T Consensus 165 ~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 345678899999999999999976667889999999999998765
No 437
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=94.19 E-value=0.13 Score=41.50 Aligned_cols=84 Identities=6% Similarity=-0.031 Sum_probs=56.4
Q ss_pred HHHhHhCCCccccc-ChhHHHHHhccCCeEEEEEecCCCCcCHHHHH------HHh-ccCCceeEEEe---cCHhHHhhc
Q 015368 155 WVREKMTLGTYSIT-TTDEAERILTVESKLVLGFLHDLEGMESEELA------AAS-KLHSDVNFYQT---TSADVAEFF 223 (408)
Q Consensus 155 ~i~~~~~~~~~~i~-~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~------~~a-~~~~~~~f~~~---~~~~l~~~~ 223 (408)
++.++...++.=.. +.+.++.....+++++|.|+.+||.++...-. .++ .+..++.+..+ ..+++.+.|
T Consensus 13 yl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y 92 (173)
T 3ira_A 13 YLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIY 92 (173)
T ss_dssp HHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHH
T ss_pred HHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHH
Confidence 45666666654332 46778888888999999999999998655322 223 23335555544 345677777
Q ss_pred --------CCCCCCCCCeEEEeecCC
Q 015368 224 --------HIHPKSKRPALIFLHLEA 241 (408)
Q Consensus 224 --------~i~~~~~~p~l~~~~~~~ 241 (408)
++. +.|+++++..++
T Consensus 93 ~~~~q~~~gv~---g~Pt~v~l~~dG 115 (173)
T 3ira_A 93 MTVCQIILGRG---GWPLNIIMTPGK 115 (173)
T ss_dssp HHHHHHHHSCC---CSSEEEEECTTS
T ss_pred HHHHHHHcCCC---CCcceeeECCCC
Confidence 887 699999998654
No 438
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=94.10 E-value=0.19 Score=39.61 Aligned_cols=89 Identities=16% Similarity=0.102 Sum_probs=61.8
Q ss_pred CccEEEEEe-eCCC-chHHHHHH---HHHHHHhcCCcceEEEEEEEcCCcccccchhhhccCCCCCCcEEEEEccC-Ccc
Q 015368 283 PRKQLWLFA-PAYG-SDKVILTF---EEVAKALKGKVNMLLHVYVEMNSEGVGRRVSQEFGVSGNAPRVIAYSARD-AKK 356 (408)
Q Consensus 283 ~~~~~i~f~-~~~~-~~~~~~~~---~~vA~~~~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~p~i~i~~~~-~~~ 356 (408)
++|+++.|. +||. |+...... .+|+...+.+ +.++.+|.+..+ ...+++.|++. .+|.+++++.+ |+.
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~---fv~v~~d~~~~~-~~~l~~~y~v~--~~P~~~fld~~~G~~ 115 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREH---FIFWQVYHDSEE-GQRYIQFYKLG--DFPYVSILDPRTGQK 115 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHT---EEEEEEESSSHH-HHHHHHHHTCC--SSSEEEEECTTTCCC
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcC---eEEEEEecCCHh-HHHHHHHcCCC--CCCEEEEEeCCCCcE
Confidence 446655444 5555 66554432 3677777667 999999987654 56788999995 47899999874 543
Q ss_pred c-cCCCCCChHHHHHHHHHHhcC
Q 015368 357 Y-VLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 357 y-~~~~~~~~~~i~~Fi~~~~~g 378 (408)
. ...| ++.+++.++++.+++.
T Consensus 116 l~~~~g-~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 116 LVEWHQ-LDVSSFLDQVTGFLGE 137 (153)
T ss_dssp CEEESS-CCHHHHHHHHHHHHHH
T ss_pred eeecCC-CCHHHHHHHHHHHHHh
Confidence 3 3456 8999999989888753
No 439
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=94.05 E-value=0.17 Score=35.53 Aligned_cols=72 Identities=8% Similarity=0.132 Sum_probs=48.8
Q ss_pred EEEEecCCCCcCHHHHHHHhccCCc--eeEEEecCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHh
Q 015368 184 VLGFLHDLEGMESEELAAASKLHSD--VNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVT 261 (408)
Q Consensus 184 vi~f~~~~~~~~~~~~~~~a~~~~~--~~f~~~~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~ 261 (408)
++.|+.+||.++...-..+.+.... ..+-...+++++++|++. .|++++ ..+ ... . |.++.+.|.+|+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~~~~vdid~~~~l~~~~g~~----vPtl~~-~~G--~~v-~-g~~~~~~L~~~l~ 73 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGAFFSVFIDDDAALESAYGLR----VPVLRD-PMG--REL-D-WPFDAPRLRAWLD 73 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCCEEEEECTTCHHHHHHHTTT----CSEEEC-TTC--CEE-E-SCCCHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhheEEEECCCCHHHHHHhCCC----cCeEEE-ECC--EEE-e-CCCCHHHHHHHHH
Confidence 5679999999876655544433332 222333678899999986 799987 432 333 2 7889999999997
Q ss_pred cCC
Q 015368 262 HTK 264 (408)
Q Consensus 262 ~~~ 264 (408)
...
T Consensus 74 ~~~ 76 (87)
T 1ttz_A 74 AAP 76 (87)
T ss_dssp TCC
T ss_pred HHH
Confidence 543
No 440
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=93.75 E-value=0.11 Score=41.34 Aligned_cols=88 Identities=11% Similarity=0.105 Sum_probs=58.0
Q ss_pred CCccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc--------------------ccccchhhhccC
Q 015368 282 DPRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE--------------------GVGRRVSQEFGV 339 (408)
Q Consensus 282 ~~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~--------------------~~~~~l~~~~~i 339 (408)
.+.++++ ++..+|. |......+.+++++ . +.++.++.++. +-...+.+.||+
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~---v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 123 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---G---IRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGV 123 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---T---CCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC---C---CEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCc
Confidence 4445554 4555665 88888889988876 3 66666663221 012356677888
Q ss_pred CCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhc
Q 015368 340 SGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 340 ~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
.. .|..++++.+|+ .+.+.|..+.+.+.++|+.+++
T Consensus 124 ~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 124 YG--APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp CS--SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred cc--cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 43 687777766444 4556788889999998888764
No 441
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=93.68 E-value=0.087 Score=42.56 Aligned_cols=80 Identities=6% Similarity=-0.011 Sum_probs=52.7
Q ss_pred CCeEEEEEecCCCCcCHHHHHHHhccC-CceeEEEe--------------------------cCHhHHhhcCCCCCCCCC
Q 015368 180 ESKLVLGFLHDLEGMESEELAAASKLH-SDVNFYQT--------------------------TSADVAEFFHIHPKSKRP 232 (408)
Q Consensus 180 ~~~~vi~f~~~~~~~~~~~~~~~a~~~-~~~~f~~~--------------------------~~~~l~~~~~i~~~~~~p 232 (408)
++.++|.|+.+||.++......+.++. .++.+..+ .+..+.+.|++. +.|
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~---~~P 134 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY---GAP 134 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC---SSC
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC---CCC
Confidence 467788888999987655544433211 13444332 234677888887 589
Q ss_pred eEEEeecCCCcccccCCcCCHHHHHHHHhc
Q 015368 233 ALIFLHLEAGKATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 233 ~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 262 (408)
+.+++...+.....+.|..+.+.+.++|..
T Consensus 135 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp EEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred eEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 888887766555677788888888877754
No 442
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=93.53 E-value=0.33 Score=37.15 Aligned_cols=88 Identities=9% Similarity=0.113 Sum_probs=56.2
Q ss_pred CccEEEE-EeeCCC-chHHHHHHHH---HHHHhcCCcceEEEEEEEcCCcc-cccch--------------------hhh
Q 015368 283 PRKQLWL-FAPAYG-SDKVILTFEE---VAKALKGKVNMLLHVYVEMNSEG-VGRRV--------------------SQE 336 (408)
Q Consensus 283 ~~~~~i~-f~~~~~-~~~~~~~~~~---vA~~~~~~~~~i~f~~vd~~~~~-~~~~l--------------------~~~ 336 (408)
+.++++. +..+|. |......+.+ ++++++++ ++.++.++.+... -...+ .+.
T Consensus 27 gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 27 AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG--TLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT--SEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC--CeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 4455554 445665 8888777777 88888643 2888888876431 00011 236
Q ss_pred ccCCCCCCcEEEEEccCCccccCCCCCChHHHHHHHHHHh
Q 015368 337 FGVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 337 ~~i~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
||+. ..|.+++++.+|+... +..+.+++.+++++..
T Consensus 105 ~~v~--~~P~~~lid~~G~i~~--~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 105 YDIR--ATPTIYLLDGRKRVIL--KDTSMEQLIDYLATQA 140 (142)
T ss_dssp SCCC--SSSEEEEECTTCBEEE--CSCCHHHHHHHHHC--
T ss_pred cCCC--CCCeEEEECCCCCEEe--cCCCHHHHHHHHHHHc
Confidence 7774 4688888887555432 4578999999998764
No 443
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=93.34 E-value=0.13 Score=45.29 Aligned_cols=81 Identities=12% Similarity=-0.101 Sum_probs=52.9
Q ss_pred hHHHHHhccCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEe----cCHhHHhhcCCCCCCCCCeEEEeecCCCc
Q 015368 171 DEAERILTVESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQT----TSADVAEFFHIHPKSKRPALIFLHLEAGK 243 (408)
Q Consensus 171 ~~~~~~~~~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~----~~~~l~~~~~i~~~~~~p~l~~~~~~~~~ 243 (408)
..+.+.+.+.. ++.|+.+||.++.+ .+.++++....+.+... .+++++++++++ ++|++++ ++ +
T Consensus 190 ~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI~---~vPT~~i--~G--~ 260 (291)
T 3kp9_A 190 VGLAAHLRQIG--GTMYGAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGIT---SYPTWII--NG--R 260 (291)
T ss_dssp HHHHHHHHHTT--CEEEECTTCHHHHHHHHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTCC---STTEEEE--TT--E
T ss_pred HHHHHHhCCCC--EEEEECCCCHHHHHHHHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCCc---ccCeEEE--CC--E
Confidence 34455555444 57799999998554 44444422222222211 157899999999 6999664 32 2
Q ss_pred ccccCCcCCHHHHHHHHhc
Q 015368 244 ATPFRHQFTRLAIANFVTH 262 (408)
Q Consensus 244 ~~~y~g~~~~~~i~~fi~~ 262 (408)
.|.|..+.+++.+|+..
T Consensus 261 --~~~G~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 261 --TYTGVRSLEALAVASGY 277 (291)
T ss_dssp --EEESCCCHHHHHHHTCC
T ss_pred --EecCCCCHHHHHHHHCC
Confidence 39999999999999964
No 444
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=93.20 E-value=0.33 Score=40.70 Aligned_cols=91 Identities=14% Similarity=0.152 Sum_probs=63.7
Q ss_pred EEEE-EeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc--------------------------ccccchhhhc
Q 015368 286 QLWL-FAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE--------------------------GVGRRVSQEF 337 (408)
Q Consensus 286 ~~i~-f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~--------------------------~~~~~l~~~~ 337 (408)
+++. +..+|. |......|.+++++++++ ++.|+.++.+.. +-...+.+.|
T Consensus 62 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 139 (218)
T 3u5r_E 62 LLVAFISNRCPFVVLIREALAKFAGDYAGQ--GLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAY 139 (218)
T ss_dssp EEEEECCSSCHHHHTTHHHHHHHHHHHTTT--TEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHH
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHHHhC--CcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHc
Confidence 4444 445565 788889999999999864 288888887421 0124667788
Q ss_pred cCCCCCCcEEEEEccCCc-ccc---------CCCCCChHHHHHHHHHHhcCcc
Q 015368 338 GVSGNAPRVIAYSARDAK-KYV---------LNGELTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~~-~y~---------~~~~~~~~~i~~Fi~~~~~gk~ 380 (408)
|+.. .|.+++++.+|+ .|. ..+..+.++|.+.|+.+++|+-
T Consensus 140 ~v~~--~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 140 GAAC--TPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp TCCE--ESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred CCCC--CCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 8843 588888887544 332 1234678999999999999976
No 445
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=93.20 E-value=0.22 Score=45.21 Aligned_cols=92 Identities=12% Similarity=0.008 Sum_probs=65.1
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc------------------------cccchhhh
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG------------------------VGRRVSQE 336 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~------------------------~~~~l~~~ 336 (408)
++++++ ++..||. |......+.+++.+++++ ++.++.++++... -...+.+.
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~--~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS--GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC--CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 345555 4556666 899999999999999862 2899988764210 01356677
Q ss_pred ccCCCCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcC
Q 015368 337 FGVSGNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 337 ~~i~~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
|++. ..|.+++++.+|+ .+.+.|..+.+++.++|++++..
T Consensus 160 ygV~--~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 160 YRNR--YWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp TTCC--EESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHH
T ss_pred cCCC--ccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 8874 3688888877444 45567778899999999998854
No 446
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=92.95 E-value=0.14 Score=41.69 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=34.1
Q ss_pred CCCcEEEEEecCCChhHHhhhHHHHHHHHHh-cCCcEEEEEeC
Q 015368 72 KNRNVMVMFYANWCYWSKKLAPEFAAAAKML-KGEADLVMVDA 113 (408)
Q Consensus 72 ~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~-~~~v~~~~v~~ 113 (408)
..+.++|.|....||+|+++.+.+.++.+++ .++|.++--+.
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEc
Confidence 4578899999999999999999998877776 55777776653
No 447
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=92.72 E-value=0.23 Score=39.79 Aligned_cols=78 Identities=13% Similarity=-0.053 Sum_probs=49.2
Q ss_pred cCCeEEEEEecCCCCcCHH---HHHHHhccCCceeEEEec---CHhHHhhcC---CCCCCCCCeEEEeecCCCcccccCC
Q 015368 179 VESKLVLGFLHDLEGMESE---ELAAASKLHSDVNFYQTT---SADVAEFFH---IHPKSKRPALIFLHLEAGKATPFRH 249 (408)
Q Consensus 179 ~~~~~vi~f~~~~~~~~~~---~~~~~a~~~~~~~f~~~~---~~~l~~~~~---i~~~~~~p~l~~~~~~~~~~~~y~g 249 (408)
.++++++.|+++||.++.. .+..++...+++.|..+. +.+++..|. +. +.|++++++.++.....+ |
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~---~iPt~i~~~~~G~~~~~~-g 128 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERI---AIPLVLVLDEEFNLLGRF-V 128 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSC---CSSEEEEECTTCCEEEEE-E
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCC---CcCeEEEECCCCCEEEEE-c
Confidence 3567888899999998644 455555434567777653 445667776 65 699999998764333334 3
Q ss_pred cCCHHHHHHHHh
Q 015368 250 QFTRLAIANFVT 261 (408)
Q Consensus 250 ~~~~~~i~~fi~ 261 (408)
... ..+...+.
T Consensus 129 ~~p-~~~~~~i~ 139 (167)
T 1z6n_A 129 ERP-QAVLDGGP 139 (167)
T ss_dssp SSC-HHHHHHCH
T ss_pred CCC-HHHHHhHH
Confidence 332 33444444
No 448
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=92.68 E-value=0.43 Score=35.66 Aligned_cols=59 Identities=7% Similarity=0.035 Sum_probs=36.4
Q ss_pred EEEEEecCCChhHHhhh--HHHHHHHHHhcCCcEEEEEeCcccHh----HHHHc--------CCCcCcEEEEEeCCe
Q 015368 76 VMVMFYANWCYWSKKLA--PEFAAAAKMLKGEADLVMVDAYLEKD----LAKEY--------NILAYPTLYLFVAGV 138 (408)
Q Consensus 76 ~~v~f~a~wC~~C~~~~--p~~~~~~~~~~~~v~~~~v~~~~~~~----~~~~~--------~i~~~Pt~~~~~~g~ 138 (408)
+++.|.+++|+.|+-.. -...++-+.. +|.|-.+|++.+++ +.++. |...+|.++ .+|.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~k--gV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIF--i~~~ 73 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEAN--KIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIF--NESQ 73 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHHT--TCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEE--ETTE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHHC--CCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEE--ECCE
Confidence 46678899999994211 1122222222 78999999986643 44566 777788654 4663
No 449
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=92.46 E-value=0.26 Score=36.74 Aligned_cols=67 Identities=16% Similarity=0.308 Sum_probs=42.6
Q ss_pred hhhHHHHHcCCCcEEEEEe----cCCChhHHhhhHHHHHHHHHhcCCc-EEEEEeCcccHhH----HHHcCCCcCcEEEE
Q 015368 63 GKNFSEFMGKNRNVMVMFY----ANWCYWSKKLAPEFAAAAKMLKGEA-DLVMVDAYLEKDL----AKEYNILAYPTLYL 133 (408)
Q Consensus 63 ~~~~~~~~~~~~~~~v~f~----a~wC~~C~~~~p~~~~~~~~~~~~v-~~~~v~~~~~~~~----~~~~~i~~~Pt~~~ 133 (408)
.+.+++.+.+++ |+|+-- +|.|+.|++....+... ++ .+..+|+++++++ .+.-|-+.+|.++
T Consensus 10 ~e~i~~~i~~~~-VvvF~Kgt~~~P~C~fc~~ak~lL~~~------gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIF- 81 (118)
T 2wul_A 10 AEQLDALVKKDK-VVVFLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVY- 81 (118)
T ss_dssp HHHHHHHHHHSS-EEEEESBCSSSBSSHHHHHHHHHHHHT------TCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEE-
T ss_pred HHHHHHHHhcCC-EEEEEcCCCCCCCCHHHHHHHHHHHHh------CCcCeEeecccCCHHHHHHHHHhccCCCCCeEe-
Confidence 455667776654 444322 26799999987666432 34 3677888777654 3445777899874
Q ss_pred EeCCe
Q 015368 134 FVAGV 138 (408)
Q Consensus 134 ~~~g~ 138 (408)
-+|+
T Consensus 82 -I~g~ 85 (118)
T 2wul_A 82 -LNGE 85 (118)
T ss_dssp -ETTE
T ss_pred -ECCE
Confidence 4674
No 450
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=92.35 E-value=0.61 Score=36.60 Aligned_cols=90 Identities=9% Similarity=0.058 Sum_probs=60.9
Q ss_pred CccEEE-EEeeCCC--chHHHHHHHHHHHHhcC-----CcceEEEEEEEcCCcc-------------------------c
Q 015368 283 PRKQLW-LFAPAYG--SDKVILTFEEVAKALKG-----KVNMLLHVYVEMNSEG-------------------------V 329 (408)
Q Consensus 283 ~~~~~i-~f~~~~~--~~~~~~~~~~vA~~~~~-----~~~~i~f~~vd~~~~~-------------------------~ 329 (408)
+.++++ ++..+|. |......++++..+++. + +.++.++.+... -
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~---~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~ 99 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPD---LTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREE 99 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCC---EEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCc---EEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHH
Confidence 445444 4556776 88999999999999864 5 888888875420 0
Q ss_pred ccchhhhccCCCCCCc---------------EEEEEccCC-ccccCCCCCChHHHHHHHHHHhc
Q 015368 330 GRRVSQEFGVSGNAPR---------------VIAYSARDA-KKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 330 ~~~l~~~~~i~~~~~p---------------~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
...+.+.||+.. .| .+++++.+| ..+.+.|..+.++|.+.|+.++.
T Consensus 100 ~~~~~~~~~v~~--~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 100 VDQVARAYRVYY--SPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHHHTTTCCE--EEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHHHhcCeEE--EecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 113556777743 34 677777744 44556777889999999988764
No 451
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=92.29 E-value=1.9 Score=33.15 Aligned_cols=88 Identities=15% Similarity=0.137 Sum_probs=60.6
Q ss_pred CccEEE-EEeeCC-C--chHHHHHHHHHHHHh-cCCcceEEEEEEEcCCcc--c--------------------ccchhh
Q 015368 283 PRKQLW-LFAPAY-G--SDKVILTFEEVAKAL-KGKVNMLLHVYVEMNSEG--V--------------------GRRVSQ 335 (408)
Q Consensus 283 ~~~~~i-~f~~~~-~--~~~~~~~~~~vA~~~-~~~~~~i~f~~vd~~~~~--~--------------------~~~l~~ 335 (408)
+.++++ ++..+| . |......+.++++++ +++ ++.++.++.+... + ...+.+
T Consensus 33 gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 110 (150)
T 3fw2_A 33 QKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK--YIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAK 110 (150)
T ss_dssp TSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS--SEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC--CeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHH
Confidence 445555 455665 4 688999999999999 543 3888888876531 0 135677
Q ss_pred hccCCCCCCcEEEEEccCCcc-ccCCCCCChHHHHHHHHHHhc
Q 015368 336 EFGVSGNAPRVIAYSARDAKK-YVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 336 ~~~i~~~~~p~i~i~~~~~~~-y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
.||+. ..|.+++++.+|+. +.. .+.+++.+.|+.+++
T Consensus 111 ~~~v~--~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 111 QYSIY--KIPANILLSSDGKILAKN---LRGEELKKKIENIVE 148 (150)
T ss_dssp HTTCC--SSSEEEEECTTSBEEEES---CCHHHHHHHHHHHHH
T ss_pred HcCCC--ccCeEEEECCCCEEEEcc---CCHHHHHHHHHHHHh
Confidence 88885 46888888875543 333 278889999888764
No 452
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=92.24 E-value=0.11 Score=46.77 Aligned_cols=68 Identities=12% Similarity=0.214 Sum_probs=38.4
Q ss_pred HHHHHcCCCcEEEEEecCCChhHHhhhH-HHHHHHHHhcCCcEEEEEeC-ccc----HhHHHHcCCCcCcEEEEEeCCe
Q 015368 66 FSEFMGKNRNVMVMFYANWCYWSKKLAP-EFAAAAKMLKGEADLVMVDA-YLE----KDLAKEYNILAYPTLYLFVAGV 138 (408)
Q Consensus 66 ~~~~~~~~~~~~v~f~a~wC~~C~~~~p-~~~~~~~~~~~~v~~~~v~~-~~~----~~~~~~~~i~~~Pt~~~~~~g~ 138 (408)
+++++..++ ++.|..+||++|++... .+++..-.+. .+.++.+|- +++ ..+.+..|.+.+|+++ -+|+
T Consensus 254 V~~lI~~~~--VvVYsk~~CPyC~~Ak~~LL~~~gV~y~-eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVF--I~Gk 327 (362)
T 2jad_A 254 VKDLIAENE--IFVASKTYCPYSHAALNTLFEKLKVPRS-KVLVLQLNDMKEGADIQAALYEINGQRTVPNIY--INGK 327 (362)
T ss_dssp HHHHHHTCS--EEEEECTTCHHHHHHHHHHHTTTCCCTT-TEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEE--ETTE
T ss_pred HHHHhccCC--EEEEEcCCCcchHHHHHHHHHHcCCCcc-eEEEEEeccccCCHHHHHHHHHHHCCCCcCEEE--ECCE
Confidence 345555543 45588999999998764 3443221111 233333321 222 3345667999999874 3774
No 453
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=92.07 E-value=0.58 Score=35.86 Aligned_cols=68 Identities=9% Similarity=0.043 Sum_probs=48.4
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcC--CcceEEEEEEEcCCcc---------------------cccchhhhc
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKG--KVNMLLHVYVEMNSEG---------------------VGRRVSQEF 337 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~--~~~~i~f~~vd~~~~~---------------------~~~~l~~~~ 337 (408)
+.++++ ++..+|. |......+.++++++++ . +.++.++.+... -...+.+.|
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~---~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 104 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKN---FEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGF 104 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTT---EEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCC---EEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHc
Confidence 445544 4555666 88999999999999984 5 999999887521 024577788
Q ss_pred cCCCCCCcEEEEEc-cCCc
Q 015368 338 GVSGNAPRVIAYSA-RDAK 355 (408)
Q Consensus 338 ~i~~~~~p~i~i~~-~~~~ 355 (408)
|+. ..|.+++++ .+|+
T Consensus 105 ~v~--~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 105 DVK--SIPTLVGVEADSGN 121 (144)
T ss_dssp TCC--SSSEEEEEETTTCC
T ss_pred CCC--CCCEEEEEECCCCc
Confidence 884 468888888 5444
No 454
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=91.94 E-value=0.13 Score=44.43 Aligned_cols=29 Identities=10% Similarity=0.170 Sum_probs=25.0
Q ss_pred CCcEEEEEecCCChhHHhhhHHHHHHHHH
Q 015368 73 NRNVMVMFYANWCYWSKKLAPEFAAAAKM 101 (408)
Q Consensus 73 ~~~~~v~f~a~wC~~C~~~~p~~~~~~~~ 101 (408)
++.+++.|+.+.||+|+++.+.+.+..+.
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 56899999999999999999999865543
No 455
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=91.74 E-value=0.68 Score=35.60 Aligned_cols=68 Identities=10% Similarity=0.113 Sum_probs=48.3
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhc--CCcceEEEEEEEcCCcc---------------------cccchhhhc
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALK--GKVNMLLHVYVEMNSEG---------------------VGRRVSQEF 337 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~--~~~~~i~f~~vd~~~~~---------------------~~~~l~~~~ 337 (408)
+.++++ ++..+|. |......+.+++++++ ++ +.++.++.+... -...+.+.|
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~---~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 104 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKN---FEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHF 104 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTT---EEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHT
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCC---eEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHh
Confidence 345544 4555666 8899999999999998 35 999999887531 024677888
Q ss_pred cCCCCCCcEEEEEc-cCCc
Q 015368 338 GVSGNAPRVIAYSA-RDAK 355 (408)
Q Consensus 338 ~i~~~~~p~i~i~~-~~~~ 355 (408)
|+. ..|.+++++ .+|+
T Consensus 105 ~v~--~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 105 NVE--SIPTLIGVDADSGD 121 (146)
T ss_dssp TCC--SSSEEEEEETTTCC
T ss_pred CCC--CCCEEEEEECCCCe
Confidence 884 368888888 5444
No 456
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=91.53 E-value=0.23 Score=41.01 Aligned_cols=95 Identities=13% Similarity=0.144 Sum_probs=47.2
Q ss_pred cHhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHh------HhCC-Cccc----ccChhHHHHHh--ccCCe
Q 015368 116 EKDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVRE------KMTL-GTYS----ITTTDEAERIL--TVESK 182 (408)
Q Consensus 116 ~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~------~~~~-~~~~----i~~~~~~~~~~--~~~~~ 182 (408)
+...++.+||+|+|++++ +|+......+ .+.+.+.+|+++ .+.. ++.. +..-.+...+. ...++
T Consensus 39 ~~~~a~~~gi~gvP~fvi--ngk~~~~~~~-~~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~~~g~~y~~l~~p~~~~~ 115 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV--NGKYQLNPQG-MDTSNMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGAP 115 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTTEEECGGG-SCCSSHHHHHHHHHHHHHHHTC---------CCBTTTEEECSSCCTTCC
T ss_pred HHHHHHHcCCCcCCEEEE--cceEecCccc-cccccHHHHHHHHHHHHHHHHhCcccccccccCCCCCceEccCCCCCCC
Confidence 345688999999999865 7754332222 222223222222 2211 1100 00000111111 12457
Q ss_pred EEEEEecCCCCcCHHHH------HHHh-ccCCceeEEE
Q 015368 183 LVLGFLHDLEGMESEEL------AAAS-KLHSDVNFYQ 213 (408)
Q Consensus 183 ~vi~f~~~~~~~~~~~~------~~~a-~~~~~~~f~~ 213 (408)
.+|-||..||.+++..- ..++ .+.+++.|..
T Consensus 116 ~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~ 153 (197)
T 1un2_A 116 QVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTK 153 (197)
T ss_dssp SEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEE
T ss_pred EEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEE
Confidence 88899999999976654 3434 4445566554
No 457
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=91.51 E-value=0.73 Score=36.50 Aligned_cols=72 Identities=7% Similarity=0.039 Sum_probs=50.2
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCccc---------------------ccchhhhccC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGV---------------------GRRVSQEFGV 339 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~---------------------~~~l~~~~~i 339 (408)
++++++ ++..+|. |......+.++++++++. +++.++.++.+...- ...+.+.|++
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-KNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-CCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 445555 5556676 899999999999999851 128888888765420 0467788888
Q ss_pred CCCCCcEEEEEccC-Cccc
Q 015368 340 SGNAPRVIAYSARD-AKKY 357 (408)
Q Consensus 340 ~~~~~p~i~i~~~~-~~~y 357 (408)
. ..|.+++++.+ |+..
T Consensus 127 ~--~~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 127 E--SIPTLIGLNADTGDTV 143 (165)
T ss_dssp C--SSSEEEEEETTTCCEE
T ss_pred C--CCCEEEEEeCCCCEEE
Confidence 4 46888888864 5443
No 458
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=90.96 E-value=1.2 Score=35.98 Aligned_cols=94 Identities=14% Similarity=0.030 Sum_probs=58.1
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCC---------cccccchhh-hccCC----------
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNS---------EGVGRRVSQ-EFGVS---------- 340 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~---------~~~~~~l~~-~~~i~---------- 340 (408)
++++++ ++..||. |......+.+++.+++++ ++.++.+.++. .. ...+++ .++++
T Consensus 46 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~e~~~~~~-~~~~~~~~~~~~~p~~~~~d~~ 122 (187)
T 3dwv_A 46 GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPSNQFGGQEPGNEEE-IKEFVCTKFKAEFPIMAKINVN 122 (187)
T ss_dssp TSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG--TCEEEEEEBCCCSSCSSSBTTH-HHHSCCBCCCCSSCBBCCBCCS
T ss_pred CCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC--CeEEEEEECcccCCCCCCCHHH-HHHHHHhccCCCCceeeccccC
Confidence 344444 5667776 899999999999999864 27777776541 11 111111 22211
Q ss_pred -------------------C-CCCc---EEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCc
Q 015368 341 -------------------G-NAPR---VIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 341 -------------------~-~~~p---~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
. ...| ..++++.+|+ .+.+.|..+.++|.+.|+.+++|.
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~~ 185 (187)
T 3dwv_A 123 GENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGSA 185 (187)
T ss_dssp CC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC---
T ss_pred CcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 0 1234 6777777444 455778889999999999998763
No 459
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=90.80 E-value=0.95 Score=35.64 Aligned_cols=95 Identities=19% Similarity=0.082 Sum_probs=59.8
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCc--------ccccch-hhhc--------------
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSE--------GVGRRV-SQEF-------------- 337 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~--------~~~~~l-~~~~-------------- 337 (408)
+.++++ ++..+|. |......+++++.+++++ ++.++.++++.. +-...+ .+.+
T Consensus 31 gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 31 GHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK--GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC--CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 445444 4556776 888999999999999863 288888886420 001112 1222
Q ss_pred ---------------cCCC---CCCcEEEEEccCC-ccccCCCCCChHHHHHHHHHHhcCc
Q 015368 338 ---------------GVSG---NAPRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 338 ---------------~i~~---~~~p~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
|+.. ...|..++++.+| ..+.+.|..+.+++.+.|+.++++|
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~k 169 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLEKK 169 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHHCC
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhccC
Confidence 2111 1125677777644 4555778888899999999988764
No 460
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=90.68 E-value=1.5 Score=34.55 Aligned_cols=92 Identities=12% Similarity=0.057 Sum_probs=61.4
Q ss_pred CccEEE-EEeeCCC--chHHHHHHHHHHHHhc-----CCcceEEEEEEEcCCcc-------------------------c
Q 015368 283 PRKQLW-LFAPAYG--SDKVILTFEEVAKALK-----GKVNMLLHVYVEMNSEG-------------------------V 329 (408)
Q Consensus 283 ~~~~~i-~f~~~~~--~~~~~~~~~~vA~~~~-----~~~~~i~f~~vd~~~~~-------------------------~ 329 (408)
+.++++ ++..+|. |......+++++.++. .+ +.++.++.+... -
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~---v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~ 102 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPP---VQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQ 102 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCC---EEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCc---eEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHH
Confidence 345444 4556765 8899999999999995 35 898888876310 0
Q ss_pred ccchhhhccCCCC-------------CCcEEEEEccCC-ccccCCCCCChHHHHHHHHHHhc
Q 015368 330 GRRVSQEFGVSGN-------------APRVIAYSARDA-KKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 330 ~~~l~~~~~i~~~-------------~~p~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
...+.+.||+... ..|.+++++.+| ..+.+.|..+.++|.+.|+.++.
T Consensus 103 ~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 103 VAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 1145667777421 123777777744 44556778889999999988765
No 461
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=90.32 E-value=1.5 Score=32.73 Aligned_cols=43 Identities=16% Similarity=0.059 Sum_probs=29.7
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCcccH-------hHHHHcCC
Q 015368 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLEK-------DLAKEYNI 125 (408)
Q Consensus 77 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~~-------~~~~~~~i 125 (408)
+..|+.++|+.|++....+++. ++.+-.+|+.+++ ++.+++|+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH------GIDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 5667899999999988777662 4666677775432 34556663
No 462
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=90.23 E-value=0.37 Score=47.29 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=44.1
Q ss_pred hhHHHHHcCCCcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc---H----hHHHHcCCCcCcEEEEEeC
Q 015368 64 KNFSEFMGKNRNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE---K----DLAKEYNILAYPTLYLFVA 136 (408)
Q Consensus 64 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~---~----~~~~~~~i~~~Pt~~~~~~ 136 (408)
+.+++.+..++ ++.|..+||++|++....+++. ++.+-.+|++.. + .+.+..+...+|.+ |-+
T Consensus 9 ~~v~~~i~~~~--v~vy~~~~Cp~C~~~k~~L~~~------~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v--~i~ 78 (598)
T 2x8g_A 9 QWLRKTVDSAA--VILFSKTTCPYCKKVKDVLAEA------KIKHATIELDQLSNGSAIQKCLASFSKIETVPQM--FVR 78 (598)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE--EET
T ss_pred HHHHHHhccCC--EEEEECCCChhHHHHHHHHHHC------CCCcEEEEcccCcchHHHHHHHHHHhCCceeCEE--EEC
Confidence 45666665543 5668999999999988887753 344555666542 2 23445688899987 447
Q ss_pred CeEe
Q 015368 137 GVRQ 140 (408)
Q Consensus 137 g~~~ 140 (408)
|+.+
T Consensus 79 g~~i 82 (598)
T 2x8g_A 79 GKFI 82 (598)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 7543
No 463
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=90.15 E-value=0.23 Score=36.70 Aligned_cols=84 Identities=8% Similarity=0.086 Sum_probs=50.2
Q ss_pred HHHHHhccCCeEEEEEecCCCCcCHHHHHHHhccCCceeEEEec-C-------HhHHhhcCCCCCCCCCeEEEeecCCCc
Q 015368 172 EAERILTVESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQTT-S-------ADVAEFFHIHPKSKRPALIFLHLEAGK 243 (408)
Q Consensus 172 ~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~a~~~~~~~f~~~~-~-------~~l~~~~~i~~~~~~p~l~~~~~~~~~ 243 (408)
.++..+... .+++ |+.+||.++......+.++...+.+..+. + ..+.+.+++. +.|++ |..+ ..
T Consensus 12 ~~~~~~~~~-~vv~-f~a~~C~~C~~~~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~---~~Pt~--~~~g-~~ 83 (116)
T 2e7p_A 12 KAKELASSA-PVVV-FSKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRG---TVPNV--FIGG-KQ 83 (116)
T ss_dssp HHHHHHTSS-SEEE-EECTTCHHHHHHHHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSCC---SSCEE--EETT-EE
T ss_pred HHHHHHcCC-CEEE-EECCCChhHHHHHHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCCC---CcCEE--EECC-EE
Confidence 344444443 4444 99999999776665555544455555542 2 3488899997 58998 3332 12
Q ss_pred ccccCCcC---CHHHHHHHHhcC
Q 015368 244 ATPFRHQF---TRLAIANFVTHT 263 (408)
Q Consensus 244 ~~~y~g~~---~~~~i~~fi~~~ 263 (408)
...+.|.. +.+.|.+|+...
T Consensus 84 v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 84 IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EECHHHHHHHHHTTCHHHHHHHT
T ss_pred ECChHHHHHHHhCChHHHHHHHc
Confidence 22333332 456788888764
No 464
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=90.08 E-value=1.8 Score=35.52 Aligned_cols=36 Identities=17% Similarity=0.323 Sum_probs=29.5
Q ss_pred HHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 120 AKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 120 ~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
++++||.|+|++++ +|+ .+.|....+.+.+.|.+..
T Consensus 160 a~~~Gv~G~Ptfvi--~g~---~~~G~~~~~~l~~~l~~~~ 195 (203)
T 2imf_A 160 AIERKVFGVPTMFL--GDE---MWWGNDRLFMLESAMGRLC 195 (203)
T ss_dssp HHHTTCCSSSEEEE--TTE---EEESGGGHHHHHHHHHHHH
T ss_pred HHHCCCCcCCEEEE--CCE---EEECCCCHHHHHHHHhccc
Confidence 46689999999877 784 5789999999998887654
No 465
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=89.97 E-value=1.9 Score=33.88 Aligned_cols=94 Identities=13% Similarity=0.034 Sum_probs=59.4
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCC--------cccccchhh-hccCC-----------
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNS--------EGVGRRVSQ-EFGVS----------- 340 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~--------~~~~~~l~~-~~~i~----------- 340 (408)
++++++ ++..+|. |......+.+++.+++++ ++.++.++++. .+-...+++ .++++
T Consensus 32 gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 32 GKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCEEEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 445444 4556676 889999999999999853 28888887642 100112222 22210
Q ss_pred ------------------CCCCc---EEEEEccCC-ccccCCCCCChHHHHHHHHHHhcC
Q 015368 341 ------------------GNAPR---VIAYSARDA-KKYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 341 ------------------~~~~p---~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
....| ..++++.+| ..+.+.|..+.+++.+.|+.+++.
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEI 169 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTTC
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhhc
Confidence 02245 677777644 445567888889999999988753
No 466
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=89.78 E-value=2 Score=33.92 Aligned_cols=90 Identities=17% Similarity=0.052 Sum_probs=55.7
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcC--------Ccccccchh-h----------------
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMN--------SEGVGRRVS-Q---------------- 335 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~--------~~~~~~~l~-~---------------- 335 (408)
++++++ ++..+|. |. ....+.+++.+++++ ++.++.++++ ..+-...++ +
T Consensus 32 Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 32 GKVVLIVNVASKCGFTP-QYKELEALYKRYKDE--GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG--TEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCEEEEEEEecCCCcch-hHHHHHHHHHHhccC--CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 445444 5556776 88 889999999999863 2888888653 110011222 1
Q ss_pred -------------hccCCCCCCc------EEEEEccCC-ccccCCCCCChHHHHHHHHHHhc
Q 015368 336 -------------EFGVSGNAPR------VIAYSARDA-KKYVLNGELTLSSIKSFGEEFLE 377 (408)
Q Consensus 336 -------------~~~i~~~~~p------~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~~ 377 (408)
.+|+. ..| ..++++.+| ..+.+.|..+.+.+.+.|+.+++
T Consensus 109 ~~~~~~~~~~~~~~~~v~--~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGML--GLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TTBCHHHHHHHHHSCCSS--SCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred ccchHHHHHHHhccCCcC--CCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 13332 246 677777644 45556788889999999998875
No 467
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=89.65 E-value=1.7 Score=33.70 Aligned_cols=89 Identities=9% Similarity=0.038 Sum_probs=56.4
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc-c----------------cc---chhhhccCC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG-V----------------GR---RVSQEFGVS 340 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~-~----------------~~---~l~~~~~i~ 340 (408)
++++++ ++..+|. |......+.+++++++++ ++.++.++.+... . .. .+.+.||+.
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 112 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ--GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVT 112 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG--TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCC
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC--CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcc
Confidence 345555 4455665 888999999999999863 2889888876542 0 00 166778884
Q ss_pred CCCCcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcC
Q 015368 341 GNAPRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 341 ~~~~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
..|.+++++.+|+ .+.+.|..+ +.+.+...++|
T Consensus 113 --~~P~~~lid~~G~i~~~~~g~~~---~e~~~~~~~~~ 146 (152)
T 2lrt_A 113 --NLPSVFLVNRNNELSARGENIKD---LDEAIKKLLEG 146 (152)
T ss_dssp --SCSEEEEEETTTEEEEETTTCSC---HHHHHHHHHGG
T ss_pred --cCceEEEECCCCeEEEecCCHHH---HHHHHHHHHhc
Confidence 3688888887444 445566444 44444444444
No 468
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=89.63 E-value=0.92 Score=34.61 Aligned_cols=68 Identities=9% Similarity=0.073 Sum_probs=47.6
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhc--CCcceEEEEEEEcCCcc---------------------cccchhhhc
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALK--GKVNMLLHVYVEMNSEG---------------------VGRRVSQEF 337 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~--~~~~~i~f~~vd~~~~~---------------------~~~~l~~~~ 337 (408)
+.++++ ++..+|. |......+.+++++++ +. +.++.++.+... -...+.+.|
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~---~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKN---FEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTF 104 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTT---EEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCC---EEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHc
Confidence 345544 4555665 8899999999999998 45 889988877531 023567788
Q ss_pred cCCCCCCcEEEEEc-cCCc
Q 015368 338 GVSGNAPRVIAYSA-RDAK 355 (408)
Q Consensus 338 ~i~~~~~p~i~i~~-~~~~ 355 (408)
|+. ..|.+++++ .+|+
T Consensus 105 ~v~--~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 105 GVE--SIPTLITINADTGA 121 (144)
T ss_dssp TCC--SSSEEEEEETTTCC
T ss_pred CCC--CCCEEEEEECCCCe
Confidence 884 368888888 5444
No 469
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=88.95 E-value=1.8 Score=32.85 Aligned_cols=84 Identities=11% Similarity=0.112 Sum_probs=54.4
Q ss_pred ccEEE-EEeeCCC-chHHHHHHHH---HHHHhcCCcceEEEEEEEcCCcc--cc-------------------cchhhhc
Q 015368 284 RKQLW-LFAPAYG-SDKVILTFEE---VAKALKGKVNMLLHVYVEMNSEG--VG-------------------RRVSQEF 337 (408)
Q Consensus 284 ~~~~i-~f~~~~~-~~~~~~~~~~---vA~~~~~~~~~i~f~~vd~~~~~--~~-------------------~~l~~~~ 337 (408)
.++++ ++..+|. |......+.+ +..+++++ ++.++.++.+... +. ..+.+.|
T Consensus 32 k~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~--~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 32 EYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK--KLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT--SEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC--CeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 45555 4455666 8899999999 99999753 2888888876541 00 0134566
Q ss_pred cCCCCCCcEEEEEccCCccccCCCCCChHHHHHHHH
Q 015368 338 GVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGE 373 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~ 373 (408)
++. ..|.+++++.+|+... . ..+.++|.+|++
T Consensus 110 ~v~--~~P~~~lid~~G~i~~-~-~~~~~~l~~~l~ 141 (142)
T 3eur_A 110 DLR--AIPTLYLLDKNKTVLL-K-DATLQKVEQYLA 141 (142)
T ss_dssp CCT--TCSEEEEECTTCBEEE-E-EECHHHHHHHHH
T ss_pred CCC--cCCeEEEECCCCcEEe-c-CCCHHHHHHHHh
Confidence 663 4688888887554322 1 135788888886
No 470
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=88.70 E-value=2.4 Score=30.23 Aligned_cols=76 Identities=7% Similarity=0.015 Sum_probs=51.0
Q ss_pred CCeEEEEEecCCCCcCHHHHHHHhccCCceeEEEe-----cCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCHH
Q 015368 180 ESKLVLGFLHDLEGMESEELAAASKLHSDVNFYQT-----TSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRL 254 (408)
Q Consensus 180 ~~~~vi~f~~~~~~~~~~~~~~~a~~~~~~~f~~~-----~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~ 254 (408)
....++.|+.+||.++...-..+.++...+.|..+ .+.+++++++ . +.|+++ ..+ ... ..+.++.+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~~i~~~~vdi~~~~~~el~~~~g-~---~vP~l~--~~g--~~~-~~~g~~~~ 85 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYK-F---DIPVFH--LNG--QFL-MMHRVNTS 85 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSS-S---SCSEEE--ESS--SEE-EESSCCHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhhCCeEEEEECCCcchHHHHHHHC-C---CCCEEE--ECC--EEE-EecCCCHH
Confidence 34567779999999877666555555555776543 3467888999 6 589763 332 222 23457889
Q ss_pred HHHHHHhcCC
Q 015368 255 AIANFVTHTK 264 (408)
Q Consensus 255 ~i~~fi~~~~ 264 (408)
.|.+||....
T Consensus 86 ~l~~~l~~~~ 95 (100)
T 1wjk_A 86 KLEKQLRKLS 95 (100)
T ss_dssp HHHHHHHSSS
T ss_pred HHHHHHHHHH
Confidence 9999997643
No 471
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=88.59 E-value=1.5 Score=35.63 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=63.1
Q ss_pred CccEEEEEe--eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc----------------------cccchhhhc
Q 015368 283 PRKQLWLFA--PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG----------------------VGRRVSQEF 337 (408)
Q Consensus 283 ~~~~~i~f~--~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~----------------------~~~~l~~~~ 337 (408)
++++++.|. .+|. |......+.+++.++..+ ++.++.++.+..+ -...+.+.|
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 122 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR--DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAA 122 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHH
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHh
Confidence 346666554 5666 899999999999999853 2888888876410 023455677
Q ss_pred cCCCC---CCcEEEEEccCCc-cccCCCC----CChHHHHHHHHHHhcCcc
Q 015368 338 GVSGN---APRVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFLEDKL 380 (408)
Q Consensus 338 ~i~~~---~~p~i~i~~~~~~-~y~~~~~----~~~~~i~~Fi~~~~~gk~ 380 (408)
|+... ..|.+++++.+|+ .+.+.|. .+.+++.+.|+.+..|..
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~ 173 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSDEL 173 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC---
T ss_pred CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhCCC
Confidence 77411 3688888887443 3333332 378999999999998755
No 472
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=87.74 E-value=2.2 Score=33.61 Aligned_cols=97 Identities=12% Similarity=0.015 Sum_probs=57.3
Q ss_pred CccEEE-EEeeCCC--chHHHHHHHHHHHHhcCCcceEEEEEEEcCC---c-ccccchhhhccCC---------------
Q 015368 283 PRKQLW-LFAPAYG--SDKVILTFEEVAKALKGKVNMLLHVYVEMNS---E-GVGRRVSQEFGVS--------------- 340 (408)
Q Consensus 283 ~~~~~i-~f~~~~~--~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~---~-~~~~~l~~~~~i~--------------- 340 (408)
+.++++ ++..+|. |......+.++..++..+..++.++.++.+. . +-...+++.++++
T Consensus 33 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~ 112 (174)
T 1xzo_A 33 GEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEI 112 (174)
T ss_dssp TCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHHH
T ss_pred CCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHHH
Confidence 344444 5666774 8888889999988887431237888887652 1 0011122222211
Q ss_pred --------------------CCCCcEEEEEccCCc-cccCCCCC--ChHHHHHHHHHHhcCc
Q 015368 341 --------------------GNAPRVIAYSARDAK-KYVLNGEL--TLSSIKSFGEEFLEDK 379 (408)
Q Consensus 341 --------------------~~~~p~i~i~~~~~~-~y~~~~~~--~~~~i~~Fi~~~~~gk 379 (408)
....|..++++.+|+ .+.+.|.. +.++|.+.|+.+++.|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~k 174 (174)
T 1xzo_A 113 EEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTLK 174 (174)
T ss_dssp HHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTCCC
T ss_pred HHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHhcC
Confidence 123577777777444 33445533 5789999999988764
No 473
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=87.43 E-value=2.1 Score=34.60 Aligned_cols=92 Identities=15% Similarity=0.077 Sum_probs=58.8
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCC--------cccccchh-hhc--------------
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNS--------EGVGRRVS-QEF-------------- 337 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~--------~~~~~~l~-~~~-------------- 337 (408)
+.++++ ++..+|. |......+.+++++++++ ++.++.++++. .+-...++ +.+
T Consensus 48 Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 48 GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC--CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 345444 4556676 888999999999999853 28888887652 10011222 121
Q ss_pred ---------------cCCCCCCc------EEEEEccCCc-cccCCCCCChHHHHHHHHHHhcC
Q 015368 338 ---------------GVSGNAPR------VIAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 338 ---------------~i~~~~~p------~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
|+. ..| ..++++.+|+ .+.+.|..+.+.+.+.|+.+++.
T Consensus 126 ~~~~~~~~~l~~~~~~v~--~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGIL--KTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp TTBCHHHHHHHHHSCCGG--GCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHhhcCCcC--CCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 321 134 6777776444 55567888899999999988764
No 474
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=87.25 E-value=2.8 Score=33.67 Aligned_cols=93 Identities=12% Similarity=-0.022 Sum_probs=62.0
Q ss_pred CccEEEEEe--eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc--------c--------------ccchhhhc
Q 015368 283 PRKQLWLFA--PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG--------V--------------GRRVSQEF 337 (408)
Q Consensus 283 ~~~~~i~f~--~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~--------~--------------~~~l~~~~ 337 (408)
+.++++.|. .+|. |......+.+++.+++.+ ++.++.++.+... + ...+.+.|
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 108 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL--GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQF 108 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT--TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHT
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHh
Confidence 346666554 5665 889999999999999752 1888888876410 0 23456777
Q ss_pred cCCCC----CCcEEEEEccCCc-cccCCCC----CChHHHHHHHHHHhc
Q 015368 338 GVSGN----APRVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFLE 377 (408)
Q Consensus 338 ~i~~~----~~p~i~i~~~~~~-~y~~~~~----~~~~~i~~Fi~~~~~ 377 (408)
|+... ..|.+++++.+|+ .+.+.|. .+.++|.+.|+.+..
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 87511 4688888887444 3333332 367889999988775
No 475
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=86.76 E-value=1.2 Score=35.74 Aligned_cols=41 Identities=10% Similarity=-0.059 Sum_probs=30.2
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMN 325 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~ 325 (408)
++++++ ++..+|. |......+.+++.++.++ ++.++.++++
T Consensus 47 gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d 89 (183)
T 2obi_A 47 GFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC--GLRILAFPCN 89 (183)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECC
T ss_pred CCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC--CeEEEEEECC
Confidence 344444 5556776 888999999999999853 2888888764
No 476
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=86.51 E-value=3.8 Score=32.65 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=57.1
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCC--------cccccchhhh-ccCCC----------
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNS--------EGVGRRVSQE-FGVSG---------- 341 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~--------~~~~~~l~~~-~~i~~---------- 341 (408)
+.++++ ++..||. |......+.+++++++++ ++.++-+.++. .+-...+++. +|++-
T Consensus 38 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 115 (180)
T 3kij_A 38 GKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS--HFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILG 115 (180)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT--SEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC--CeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccC
Confidence 444444 4556776 999999999999999874 28888886542 1112233344 44321
Q ss_pred --C------------CCcE----EEEEccCCc-cccCCCCCChHHHHHHHHHHhcC
Q 015368 342 --N------------APRV----IAYSARDAK-KYVLNGELTLSSIKSFGEEFLED 378 (408)
Q Consensus 342 --~------------~~p~----i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~g 378 (408)
. ..|. .++++.+|+ .+.+.|..+.+.+.+.|+.+++.
T Consensus 116 ~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 171 (180)
T 3kij_A 116 SEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQ 171 (180)
T ss_dssp TTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHH
T ss_pred ccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence 0 1233 566666444 45567777777777777776654
No 477
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=86.06 E-value=5.4 Score=31.00 Aligned_cols=90 Identities=12% Similarity=0.147 Sum_probs=56.3
Q ss_pred EEEEEe--eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc------------------cccchhhhccCCC--C
Q 015368 286 QLWLFA--PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG------------------VGRRVSQEFGVSG--N 342 (408)
Q Consensus 286 ~~i~f~--~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~------------------~~~~l~~~~~i~~--~ 342 (408)
+++.|. .+|. |......+.+++.+++++ ++.++.++.+..+ -...+.+.||+.. .
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~ 109 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKDY--DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFIL 109 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHTT--CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSS
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCc
Confidence 666664 5565 888999999999999864 2888888765210 1346677788853 1
Q ss_pred CCcEEEEEccCCc-cccCCCC----CChHHHHHHHHHHhc
Q 015368 343 APRVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFLE 377 (408)
Q Consensus 343 ~~p~i~i~~~~~~-~y~~~~~----~~~~~i~~Fi~~~~~ 377 (408)
..|..++++.+|+ .+.+.|. -+.+++.+.++.+..
T Consensus 110 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l~~ 149 (161)
T 3drn_A 110 PARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIKE 149 (161)
T ss_dssp CCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHhhh
Confidence 2688888887554 3444442 223445555555433
No 478
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=85.37 E-value=4.4 Score=32.36 Aligned_cols=92 Identities=12% Similarity=0.116 Sum_probs=56.5
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCC--------cccccchhhh-ccCC----------C
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNS--------EGVGRRVSQE-FGVS----------G 341 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~--------~~~~~~l~~~-~~i~----------~ 341 (408)
+.++++ ++..+|. |......+++++.+++++ ++.++.++++. .+-...+++. ++++ .
T Consensus 49 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 49 GSVSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 344444 5556776 888999999999999853 28888887642 1101122232 3221 0
Q ss_pred -----------CCCc-------EEEEEccCC-ccccCCCCCChHHHHHHHHHHh
Q 015368 342 -----------NAPR-------VIAYSARDA-KKYVLNGELTLSSIKSFGEEFL 376 (408)
Q Consensus 342 -----------~~~p-------~i~i~~~~~-~~y~~~~~~~~~~i~~Fi~~~~ 376 (408)
...| ..++++.+| ..+.+.|..+.++|.+.|+.++
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 0125 566666644 3455677788889988888765
No 479
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=85.28 E-value=0.17 Score=39.74 Aligned_cols=87 Identities=10% Similarity=0.033 Sum_probs=48.1
Q ss_pred EEeeCCC-chHHHHHHHH-HHHHhc--CCcceEEEEEEEcCCc-ccccchh------------------hhccCCCCCCc
Q 015368 289 LFAPAYG-SDKVILTFEE-VAKALK--GKVNMLLHVYVEMNSE-GVGRRVS------------------QEFGVSGNAPR 345 (408)
Q Consensus 289 ~f~~~~~-~~~~~~~~~~-vA~~~~--~~~~~i~f~~vd~~~~-~~~~~l~------------------~~~~i~~~~~p 345 (408)
++..+|. |......+.+ ++.++. .. +.++.++.++. +-...+. +.||+.....|
T Consensus 40 f~a~~C~~C~~~~~~l~~~l~~~~~~~~~---~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~P 116 (159)
T 2ls5_A 40 FTASWCGVCRKEMPFIEKDIWLKHKDNAD---FALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALRDAGIT 116 (159)
Confidence 3445555 6666667776 666665 23 66666665433 1111222 33333223367
Q ss_pred EEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCc
Q 015368 346 VIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDK 379 (408)
Q Consensus 346 ~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk 379 (408)
.+++++.+|+ .+.+.| .+.+++.++++.+.++.
T Consensus 117 ~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~~~ 150 (159)
T 2ls5_A 117 RNVLIDREGKIVKLTRL-YNEEEFASLVQQINEML 150 (159)
Confidence 7777776443 334444 56677888888776653
No 480
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=84.96 E-value=0.94 Score=34.45 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=26.1
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc
Q 015368 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (408)
Q Consensus 77 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~ 116 (408)
+..|+.++|+.|++....+++. ++.+-.+|++++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEccCC
Confidence 5678899999999988777652 566777777654
No 481
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=84.72 E-value=0.7 Score=37.44 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=29.9
Q ss_pred hHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHH
Q 015368 118 DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWV 156 (408)
Q Consensus 118 ~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i 156 (408)
..++++||+|+||+++ ||+......|..+.+++.++|
T Consensus 145 ~~a~~~GV~gtPtf~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE--TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE--CCEEccCCCCCCCHHHHHHHh
Confidence 4577899999999977 886555578889999988876
No 482
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=83.82 E-value=2.1 Score=31.14 Aligned_cols=37 Identities=27% Similarity=0.539 Sum_probs=29.8
Q ss_pred CcEEEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCc
Q 015368 74 RNVMVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAY 114 (408)
Q Consensus 74 ~~~~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~ 114 (408)
|.++++|-.|.|+.|......+ +.+.++..+.+||+-
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l----~~ledeY~ilrVNIl 38 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAV----EELKSEYDILHVDIL 38 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHH----HTTTTTEEEEEEECC
T ss_pred CceEEEeCCCccHHHHHHHHHH----HHhhccccEEEEEee
Confidence 5689999999999999887776 445556778899863
No 483
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=83.24 E-value=3.6 Score=29.87 Aligned_cols=50 Identities=12% Similarity=0.125 Sum_probs=38.4
Q ss_pred CcEEEEEeCcccH----------hHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHH
Q 015368 105 EADLVMVDAYLEK----------DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (408)
Q Consensus 105 ~v~~~~v~~~~~~----------~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (408)
++.+.+.|...++ ++.+++|+...|.+++ ||+++ ..-...+.+++.+|+.
T Consensus 40 Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V--DGevv-~~G~yPt~eEl~~~lg 99 (110)
T 3kgk_A 40 GVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL--DGETV-MAGRYPKRAELARWFG 99 (110)
T ss_dssp TCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE--TTEEE-EESSCCCHHHHHHHHT
T ss_pred CCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEEE-EeccCCCHHHHHHHhC
Confidence 7999999998876 4667899999998755 88443 3333468899999985
No 484
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=82.92 E-value=2.4 Score=32.23 Aligned_cols=86 Identities=7% Similarity=0.051 Sum_probs=54.9
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc-------------c----------ccchhhhc
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG-------------V----------GRRVSQEF 337 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~-------------~----------~~~l~~~~ 337 (408)
++++++ ++..+|. |......+.+++++++++ ++.++.++.+... | ...+.+.|
T Consensus 32 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 32 GRYTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 345544 4555665 889999999999999753 2888888776421 0 12355667
Q ss_pred cCCCCCCcEEEEEccCCccccCCCCCChHHHHHHHHH
Q 015368 338 GVSGNAPRVIAYSARDAKKYVLNGELTLSSIKSFGEE 374 (408)
Q Consensus 338 ~i~~~~~p~i~i~~~~~~~y~~~~~~~~~~i~~Fi~~ 374 (408)
|+.. .|..++++.+|+...- ..+.+++.+++++
T Consensus 110 ~v~~--~P~~~lid~~G~i~~~--~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 110 DLRK--GFKNFLINDEGVIIAA--NVTPEKLTEILKA 142 (143)
T ss_dssp TGGG--CCCEEEECTTSBEEEE--SCCHHHHHHHHTC
T ss_pred CCCC--CCcEEEECCCCEEEEc--cCCHHHHHHHHHh
Confidence 7743 5777888765543321 2357778877754
No 485
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=82.53 E-value=4.5 Score=32.41 Aligned_cols=41 Identities=10% Similarity=-0.087 Sum_probs=30.0
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMN 325 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~ 325 (408)
+.++++ ++..+|. |......+++++.+++++ ++.++.++++
T Consensus 49 Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~is~d 91 (185)
T 2gs3_A 49 GFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC--GLRILAFPCN 91 (185)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECC
T ss_pred CCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC--CeEEEEEECc
Confidence 344444 5556776 888899999999999853 2888888764
No 486
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=81.67 E-value=2.1 Score=33.64 Aligned_cols=82 Identities=12% Similarity=0.048 Sum_probs=51.4
Q ss_pred CCeEEEEEecCCCCc-CHHHHH---HHh-ccCC----ceeEEEec-C------------------------------HhH
Q 015368 180 ESKLVLGFLHDLEGM-ESEELA---AAS-KLHS----DVNFYQTT-S------------------------------ADV 219 (408)
Q Consensus 180 ~~~~vi~f~~~~~~~-~~~~~~---~~a-~~~~----~~~f~~~~-~------------------------------~~l 219 (408)
.+.++|.|+.+||.+ +..... .+. ++.. ++.+..++ + ..+
T Consensus 35 gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~~ 114 (172)
T 2k6v_A 35 DKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVREA 114 (172)
T ss_dssp TSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHHH
Confidence 567888899999997 655544 333 3332 46665442 1 245
Q ss_pred HhhcCCCC------------CCCCCeEEEeecCCCcccccCCcC--CHHHHHHHHhc
Q 015368 220 AEFFHIHP------------KSKRPALIFLHLEAGKATPFRHQF--TRLAIANFVTH 262 (408)
Q Consensus 220 ~~~~~i~~------------~~~~p~l~~~~~~~~~~~~y~g~~--~~~~i~~fi~~ 262 (408)
++.|++.. -.+.|+++++. .+.....+.|.. +.++|.++|+.
T Consensus 115 ~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 115 AQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp HHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred HHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 55555420 01469999998 654555667776 78888888864
No 487
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=81.01 E-value=0.66 Score=37.75 Aligned_cols=42 Identities=17% Similarity=0.137 Sum_probs=31.4
Q ss_pred HhHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHHhHh
Q 015368 117 KDLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVREKM 160 (408)
Q Consensus 117 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~~~~ 160 (408)
...++++||.|+||+++ +|+......|..+.+.+.+.|++.+
T Consensus 152 ~~~a~~~gv~gtPt~~i--ng~~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 152 KASYDVAKIQGVPAYVV--NGKYLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGHHHHHHHHCSSEEEE--TTTEEECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEE--CCEEEeccCCCCCHHHHHHHHHHHH
Confidence 45678899999999655 7754333347789999999988765
No 488
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=81.00 E-value=6.1 Score=30.50 Aligned_cols=89 Identities=10% Similarity=0.054 Sum_probs=54.7
Q ss_pred cEEEEE--eeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc------------------c--ccchhhhccCCC
Q 015368 285 KQLWLF--APAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG------------------V--GRRVSQEFGVSG 341 (408)
Q Consensus 285 ~~~i~f--~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~------------------~--~~~l~~~~~i~~ 341 (408)
++++.| ..+|. |......+.+++.+++++ ++.++.++.+..+ . ...+.+.||+..
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~ 115 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFEND--DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFN 115 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS--SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEE
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcc
Confidence 555655 45666 888899999999998753 2888888875311 0 235667788751
Q ss_pred C--CCc--EEEEEccCCc-cccCCCCC----ChHHHHHHHHHH
Q 015368 342 N--APR--VIAYSARDAK-KYVLNGEL----TLSSIKSFGEEF 375 (408)
Q Consensus 342 ~--~~p--~i~i~~~~~~-~y~~~~~~----~~~~i~~Fi~~~ 375 (408)
. ..| ..++.+.+|+ .+.+.|.. ..+++.+.++.+
T Consensus 116 ~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 116 EQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp TTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHT
T ss_pred ccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 1 345 7777777444 33344433 345565555543
No 489
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=80.51 E-value=2.8 Score=34.11 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=63.5
Q ss_pred CccEEEEEe--eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc----c---------------------ccchh
Q 015368 283 PRKQLWLFA--PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG----V---------------------GRRVS 334 (408)
Q Consensus 283 ~~~~~i~f~--~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~----~---------------------~~~l~ 334 (408)
+.++++.|. .+|. |......+.+++.+++++ ++.++.++.+..+ | ...+.
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~--~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK--GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT--TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc--CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 446666665 4665 888899999999998743 2888888875310 0 23456
Q ss_pred hhccCCCC---CCcEEEEEccCCc-cccCCCC----CChHHHHHHHHHHhcCccccccccCchhh
Q 015368 335 QEFGVSGN---APRVIAYSARDAK-KYVLNGE----LTLSSIKSFGEEFLEDKLLNQSDQISETI 391 (408)
Q Consensus 335 ~~~~i~~~---~~p~i~i~~~~~~-~y~~~~~----~~~~~i~~Fi~~~~~gk~~~kse~iP~~~ 391 (408)
+.||+... ..|..++++.+|+ .+.+.|. .+.++|.+.|+.+... ..+.+..|.+|
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~--~~~~~~~p~~w 173 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHF--EEHGEVCPAGW 173 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHHH--HSSCCCCC---
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHHh--hccCCccCCcC
Confidence 67777411 3678888877444 3333332 3678888888887621 12344455554
No 490
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=80.46 E-value=2.9 Score=34.90 Aligned_cols=109 Identities=9% Similarity=0.058 Sum_probs=62.0
Q ss_pred CCccEEEEEe--eCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc----c---------------------ccch
Q 015368 282 DPRKQLWLFA--PAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG----V---------------------GRRV 333 (408)
Q Consensus 282 ~~~~~~i~f~--~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~----~---------------------~~~l 333 (408)
.++++++.|. .++. |......+.+++.+++++ ++.++.+..+... | ...+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 145 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR--NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEI 145 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT--TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHH
Confidence 3446666665 5666 889999999999999853 2888888776421 0 1234
Q ss_pred hhhccCCCC----CCcEEEEEccCCc-cccCCCCCCh-HHHHHHHHHHhcCcc-ccccccCchhhh
Q 015368 334 SQEFGVSGN----APRVIAYSARDAK-KYVLNGELTL-SSIKSFGEEFLEDKL-LNQSDQISETIL 392 (408)
Q Consensus 334 ~~~~~i~~~----~~p~i~i~~~~~~-~y~~~~~~~~-~~i~~Fi~~~~~gk~-~~kse~iP~~~~ 392 (408)
.+.||+... ..|..++++.+|+ .+.+.+..+. ..+.+.++.+.+.+. ..++..-|-+|+
T Consensus 146 ~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l~~~~~~~~~c~~~w~ 211 (222)
T 3ztl_A 146 SKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHGEVCPVNWK 211 (222)
T ss_dssp HHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHSCBBCTTCC
T ss_pred HHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhhcccccCccCCcCcC
Confidence 566777421 3578888887544 3333332221 123444444433333 344555555554
No 491
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=80.88 E-value=0.37 Score=36.86 Aligned_cols=67 Identities=9% Similarity=0.194 Sum_probs=39.9
Q ss_pred EEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc--c--------------------ccchhhhccCCCCC
Q 015368 287 LWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG--V--------------------GRRVSQEFGVSGNA 343 (408)
Q Consensus 287 ~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~--~--------------------~~~l~~~~~i~~~~ 343 (408)
+.++..+|. |......+.+++++++.+.+++.++.++.+... + ...+.+.||+. .
T Consensus 31 l~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~ 108 (143)
T 2lus_A 31 FYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGIT--G 108 (143)
Confidence 345556666 888888888888888421112777777665331 0 12455666663 3
Q ss_pred CcEEEEEccCCc
Q 015368 344 PRVIAYSARDAK 355 (408)
Q Consensus 344 ~p~i~i~~~~~~ 355 (408)
.|.+++++.+|+
T Consensus 109 ~P~~~lid~~G~ 120 (143)
T 2lus_A 109 IPALVIVKKDGT 120 (143)
Confidence 577777765443
No 492
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=79.45 E-value=6.2 Score=28.43 Aligned_cols=63 Identities=19% Similarity=0.149 Sum_probs=43.4
Q ss_pred hHHHHHHHHHh---cC-CcEEEEEeCcccH----------hHHHHcCCCcCcEEEEEeCCeEeEEeeCCCCHHHHHHHHH
Q 015368 92 APEFAAAAKML---KG-EADLVMVDAYLEK----------DLAKEYNILAYPTLYLFVAGVRQFQFFGERTRDVISAWVR 157 (408)
Q Consensus 92 ~p~~~~~~~~~---~~-~v~~~~v~~~~~~----------~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~i~ 157 (408)
.|++.+++..+ +. ++.+.+.|...++ ++.+++|+...|.+++ ||++ ...-...+.+++.+|+.
T Consensus 26 d~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~V--DGev-v~~G~yPt~eEl~~~lg 102 (106)
T 3ktb_A 26 NPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLV--DGEI-AVSQTYPTTKQMSEWTG 102 (106)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEE--TTEE-EECSSCCCHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEE-EEeccCCCHHHHHHHhC
Confidence 55555554433 22 7999999998876 4567899999998755 8844 33333468899998873
No 493
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=79.20 E-value=8.1 Score=31.74 Aligned_cols=41 Identities=17% Similarity=0.101 Sum_probs=29.9
Q ss_pred CccEEE-EEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcC
Q 015368 283 PRKQLW-LFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMN 325 (408)
Q Consensus 283 ~~~~~i-~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~ 325 (408)
+.++++ ++..||. |......|++++++++++ ++.++-++++
T Consensus 47 Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~--g~~vv~v~~d 89 (208)
T 2f8a_A 47 GKVLLIENVASLGGTTVRDYTQMNELQRRLGPR--GLVVLGFPCN 89 (208)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHccCC--CeEEEEEECC
Confidence 344444 5566776 888889999999999753 2888888764
No 494
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=79.08 E-value=7.3 Score=30.36 Aligned_cols=90 Identities=14% Similarity=0.130 Sum_probs=54.7
Q ss_pred CccEEEEEe-eC-CC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCccc--------------------ccchhhhccC
Q 015368 283 PRKQLWLFA-PA-YG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEGV--------------------GRRVSQEFGV 339 (408)
Q Consensus 283 ~~~~~i~f~-~~-~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~~--------------------~~~l~~~~~i 339 (408)
+++.++.|. .+ +. |......++++++++ .. +.++.++.+..+- ...+.+.||+
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~---~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 119 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GD---VNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV 119 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SS---CEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CC---CEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC
Confidence 446666554 55 55 888899999999999 55 8888887764211 1233445555
Q ss_pred CCCC----CcEEEEEccCCc-cccCC-----CCCChHHHHHHHHHHh
Q 015368 340 SGNA----PRVIAYSARDAK-KYVLN-----GELTLSSIKSFGEEFL 376 (408)
Q Consensus 340 ~~~~----~p~i~i~~~~~~-~y~~~-----~~~~~~~i~~Fi~~~~ 376 (408)
.... .|..++.+.+|+ .+.+. ...+.+++.+.++.++
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 3211 377777777443 33332 2345577877777664
No 495
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=78.70 E-value=8.4 Score=31.30 Aligned_cols=109 Identities=6% Similarity=-0.007 Sum_probs=58.0
Q ss_pred CccEEE-EEeeCCC--chHHHHHHHHHHHHhc----CCcceEEEEEEEcCCc------------c----c---------c
Q 015368 283 PRKQLW-LFAPAYG--SDKVILTFEEVAKALK----GKVNMLLHVYVEMNSE------------G----V---------G 330 (408)
Q Consensus 283 ~~~~~i-~f~~~~~--~~~~~~~~~~vA~~~~----~~~~~i~f~~vd~~~~------------~----~---------~ 330 (408)
+.++++ ++..+|. |......+.++..++. ++ +.++.++.+.. . | .
T Consensus 41 Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~---v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~ 117 (200)
T 2b7k_A 41 GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGIT---LQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEV 117 (200)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCC---CEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCc---eEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHH
Confidence 345555 4556765 7888888888777664 35 77777776521 0 0 1
Q ss_pred cchhhhccCCCCC--------------CcEEEEEccCCc-cccCCCCCChHHHHHHHHHHhcCcccccc-ccCchhhhcC
Q 015368 331 RRVSQEFGVSGNA--------------PRVIAYSARDAK-KYVLNGELTLSSIKSFGEEFLEDKLLNQS-DQISETILKL 394 (408)
Q Consensus 331 ~~l~~~~~i~~~~--------------~p~i~i~~~~~~-~y~~~~~~~~~~i~~Fi~~~~~gk~~~ks-e~iP~~~~~~ 394 (408)
..+.+.||+.... .|.+++++.+|+ .+.+.|..+.+.+.+.|..+++.-+...+ ++=++.|+.-
T Consensus 118 ~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~~ 197 (200)
T 2b7k_A 118 KNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSYVPAEQRAKQKEAWYSF 197 (200)
T ss_dssp HHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHCCCC-------------
T ss_pred HHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhcchhHHHHHHH
Confidence 2355667764211 235677777443 44567777888888888888765331111 2225666653
No 496
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=78.48 E-value=1.6 Score=32.10 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=25.4
Q ss_pred EEEEecCCChhHHhhhHHHHHHHHHhcCCcEEEEEeCccc
Q 015368 77 MVMFYANWCYWSKKLAPEFAAAAKMLKGEADLVMVDAYLE 116 (408)
Q Consensus 77 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~v~~~~v~~~~~ 116 (408)
+..|+.++|+.|++....+++. ++.+-.+|+.++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~------gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH------KVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC------CCceEEEeecCC
Confidence 4567899999999988777651 577777777644
No 497
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=77.24 E-value=3.2 Score=28.10 Aligned_cols=78 Identities=14% Similarity=0.160 Sum_probs=49.9
Q ss_pred EEEEeeCCC-chHHHHHHHHHHHHhcCCcceEEEEEEEcCCcc-cccchhhhccCCCCCCcEEEEEccCCccccCCCCCC
Q 015368 287 LWLFAPAYG-SDKVILTFEEVAKALKGKVNMLLHVYVEMNSEG-VGRRVSQEFGVSGNAPRVIAYSARDAKKYVLNGELT 364 (408)
Q Consensus 287 ~i~f~~~~~-~~~~~~~~~~vA~~~~~~~~~i~f~~vd~~~~~-~~~~l~~~~~i~~~~~p~i~i~~~~~~~y~~~~~~~ 364 (408)
+++..+++. |......|.+++.++.+ +.|..+|.+... ....+.+.+|.+-...|.+++ + ++.. .|
T Consensus 4 ~~f~~~~C~~C~~~~~~l~~l~~~~~~----i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~-~--g~~i--~~--- 71 (85)
T 1ego_A 4 VIFGRSGCPYCVRAKDLAEKLSNERDD----FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV-D--QQHI--GG--- 71 (85)
T ss_dssp EEECCTTSTHHHHHHHHHHHHHHHHSS----CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE-T--TEEE--ES---
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCC----ceEEEEecccChHHHHHHHHHhCCCCceeCeEEE-C--CEEE--EC---
Confidence 344446676 88999999999988764 889999976431 113566777722245788854 2 3322 12
Q ss_pred hHHHHHHHHHHh
Q 015368 365 LSSIKSFGEEFL 376 (408)
Q Consensus 365 ~~~i~~Fi~~~~ 376 (408)
.++|.+++++-.
T Consensus 72 ~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 YTDFAAWVKENL 83 (85)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 367888877643
No 498
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=75.73 E-value=2.3 Score=37.78 Aligned_cols=156 Identities=13% Similarity=0.035 Sum_probs=89.3
Q ss_pred CcccHhHHHHcCCCcCcEEEEEeCCeEeEEeeC-CCCHHHHHHHHHhHhCCCcccccChhHHHHH----hccCCeEEEEE
Q 015368 113 AYLEKDLAKEYNILAYPTLYLFVAGVRQFQFFG-ERTRDVISAWVREKMTLGTYSITTTDEAERI----LTVESKLVLGF 187 (408)
Q Consensus 113 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g-~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~----~~~~~~~vi~f 187 (408)
|+-.+++.++++|.-+|-.+.+++. .. .+| ..+.+++.+.+.+.-..+-+.-.+..++.+. .+..+.++...
T Consensus 45 ~dL~~e~~~~~~I~vvPL~v~~~~~-~Y--~D~~di~~~efy~~m~~~~~~p~TSqPs~~~~~~~fe~l~~~~~~Ii~I~ 121 (315)
T 3fys_A 45 AYIPKEMREQHQIHMIPLQVVFREE-TY--REEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKSYDAVISIH 121 (315)
T ss_dssp GCCCHHHHHHHTEEEECCEEECSSC-EE--EBTTTBCHHHHHHHHHTTTCCCEEECCCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCHHHHHhCCeEEEeEEEEECCE-EE--ECCCCCCHHHHHHHHHhCCCCcccCCCCHHHHHHHHHHHHhcCCcEEEEe
Confidence 3445788999999999998888533 32 234 5889999999976433333343455555444 34455555555
Q ss_pred ecCCCCcCHHHHHHHhccCCceeEEEecCHhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcCCCCc
Q 015368 188 LHDLEGMESEELAAASKLHSDVNFYQTTSADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHTKHPL 267 (408)
Q Consensus 188 ~~~~~~~~~~~~~~~a~~~~~~~f~~~~~~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~p~ 267 (408)
+++.-+..+.....+++..++..+..+.+..+.--.+. ++.... ...=.|..+.+++.+|++....-.
T Consensus 122 iSS~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~---------lv~~Aa---~l~~~G~~s~eeI~~~l~~~~~~~ 189 (315)
T 3fys_A 122 LSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGF---------YALKAA---ELIKNGASSPEDIIKELEEMKKTV 189 (315)
T ss_dssp SCTTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHH---------HHHHHH---HHHHTTCCCHHHHHHHHHHHTTTC
T ss_pred CCCcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHH---------HHHHHH---HHHHcCCCCHHHHHHHHHHHHhcc
Confidence 56655667777776665444444444433222111111 001000 000123237889999998877776
Q ss_pred eEeeccccccccccCC
Q 015368 268 VVTLTIHNAQFVFQDP 283 (408)
Q Consensus 268 v~~lt~~~~~~~~~~~ 283 (408)
-..+..+++..+...+
T Consensus 190 ~~~f~v~~L~yL~kGG 205 (315)
T 3fys_A 190 RAYFMVDDLAHLQRGG 205 (315)
T ss_dssp EEEEECSCTHHHHHHT
T ss_pred EEEEEECchHHHHhCC
Confidence 6667777766555433
No 499
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=74.68 E-value=1.8 Score=29.25 Aligned_cols=50 Identities=18% Similarity=0.043 Sum_probs=33.3
Q ss_pred EEEEecCCCCcCHHHHH---HHh-ccCCceeEEEec----CHhHHhhcCCCCCCCCCeEEE
Q 015368 184 VLGFLHDLEGMESEELA---AAS-KLHSDVNFYQTT----SADVAEFFHIHPKSKRPALIF 236 (408)
Q Consensus 184 vi~f~~~~~~~~~~~~~---~~a-~~~~~~~f~~~~----~~~l~~~~~i~~~~~~p~l~~ 236 (408)
+++|+.+||.++...-. .++ +....+.+..+. ..++++++++. +.|++++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~---~vPt~~i 61 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVK---SVPALVI 61 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCC---EEEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCC---cCCEEEE
Confidence 56789999998655544 333 333345555543 46788899988 5899886
No 500
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=72.38 E-value=4.5 Score=33.42 Aligned_cols=39 Identities=8% Similarity=0.133 Sum_probs=29.0
Q ss_pred HhHHhhcCCCCCCCCCeEEEeecCCCcccccCCcCCHHHHHHHHhcC
Q 015368 217 ADVAEFFHIHPKSKRPALIFLHLEAGKATPFRHQFTRLAIANFVTHT 263 (408)
Q Consensus 217 ~~l~~~~~i~~~~~~p~l~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 263 (408)
..+.+.++++ +.|++++ .++ . .+.|..+.+.|.++|...
T Consensus 171 ~~l~~~~gV~---gTPt~vi-~nG--~--~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 171 YELGIQFGVR---GTPSIVT-STG--E--LIGGYLKPADLLRALEET 209 (211)
T ss_dssp HHHHHHHTCC---SSCEEEC-TTS--C--CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHcCCC---cCCEEEE-eCC--E--EecCCCCHHHHHHHHHhc
Confidence 3456788998 6899986 332 2 567888889999998764
Done!